HHsearch alignment for GI: 254780867 and conserved domain: MTH00063

>MTH00063 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=420.91  Aligned_cols=347  Identities=18%  Similarity=0.195  Sum_probs=292.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r   65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV  144 (478)
Q Consensus        65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~  144 (478)
T Consensus        33 ~~~~~f~fD~~Sl~f~~~V~~Is~~V~~YS~~YM~~d~~-~~rF~~ll~lFv~sM~~LV~S~nll~l~lgWEglGl~Syl  111 (519)
T MTH00063         33 YWLINFDFDYVTFGVLLMLLICFYYALYYTFHYFGGSYA-SFLLNKIIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFF  111 (519)
T ss_pred             EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             489998639639999999999999999998887589998-4289999999999999999983599999999999999999


Q ss_pred             HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r  145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP  224 (478)
Q Consensus       145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP  224 (478)
T Consensus       112 LI~fy~~-~~s~~aa~~t~l~nRiGDv~l~~~i~~~~~~~~~~~~------------------~~l~~~l~a~tKSAQ~P  172 (519)
T MTH00063        112 LILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSSSFL------------------CGLFFFLVVFTKSASFP  172 (519)
T ss_pred             HHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHCCCC
T ss_conf             9837578-9999999999999999999999999999986238999------------------99999999998724074


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCE-ECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             000121012210012333321000-0023211111244000112221000001222102222000001244544356421
Q gi|254780867|r  225 FHMWIPDVYEGSPMFMTAFLATIP-KFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS  303 (478)
Q Consensus       225 fH~Wlp~a~~~ap~~~salls~~~-~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs  303 (478)
T Consensus       173 F~~WLp~AM~-aPTPVSALvHSsTlVtAGVyLliR~~~~~~-~-~~~~~~l~~ig~lT~~~a~~~Al~q~DlKKiIA~ST  249 (519)
T MTH00063        173 FISWLLEAMR-APTPVSSLVHSSTLVAAGVWFVMRYDYLLG-F-SWLVYFFSVCLLLTIFITGVSSLFFNDLKKIVALST  249 (519)
T ss_pred             CHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             4565678737-999188999889999999999999889860-6-799999999999999999999997863889999888


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r  304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI  383 (478)
Q Consensus       304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl  383 (478)
T Consensus       250 lSQLG~M~~~lglG~~--~lA~fHL~~HA~FKAlLFl~aG~vIh~~~-~~QDir~mg~~~~~~p~~~~~~~i~~lsL~G~  326 (519)
T MTH00063        250 CNNISWCVLYLIYGDV--ILSLFQLVSHGVSKCLLFMLVGDVMSGSG-GSQASNCVYSSILYGSWNLFYLFLLVLGLSGV  326 (519)
T ss_pred             HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             8799999999982759--99999999999999999985579997389-95156775386531259999999999998442


Q ss_pred             CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             500006759999999996284999999999999999999999999964998778
Q gi|254780867|r  384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC  437 (478)
Q Consensus       384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~  437 (478)
T Consensus       327 PFlsGFySKDlILe~~~~~~n~~~~~l~~~~~~lT~~YS~RL~~~~~~~~~~~s  380 (519)
T MTH00063        327 PFIGVFFSKHFLLSSFSSVFNVVVLLLVILCVFLSYLYSFRLCLILFGVKSSLS  380 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             164067755999999998479999999999999999999999999984777741