HHsearch alignment for GI: 254780867 and conserved domain: MTH00108

>MTH00108 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=499.29  Aligned_cols=380  Identities=19%  Similarity=0.250  Sum_probs=320.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r   65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV  144 (478)
Q Consensus        65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~  144 (478)
T Consensus        75 ~~~~sf~~D~~S~~f~~~vl~Is~~V~~yS~~YM~~d~~-~~rF~~~l~lF~~sMl~LV~s~Nl~~lfiGWEgvGl~Syl  153 (602)
T MTH00108         75 KLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPN-INRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL  153 (602)
T ss_pred             CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             528887437438999999999999999997998079989-3659999999999999999972199999999999999999


Q ss_pred             HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r  145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP  224 (478)
Q Consensus       145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP  224 (478)
T Consensus       154 LI~~w~~r~~a~~aa~~a~l~nRiGD~~lll~i~~l~~~~~s~~~~~i~~~~~~--~---~~~~l~~lllaa~~KSAQfP  228 (602)
T MTH00108        154 LIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN--N---LNLPLMGLLLAATGKSAQFG  228 (602)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC--H---HHHHHHHHHHHHHHHHHHCC
T ss_conf             999963986789999999999915689999999999998166229999973552--3---79999999999998652074


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r  225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS  303 (478)
Q Consensus       225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs  303 (478)
T Consensus       229 fh~WLP~AMe-gPTPVSALlHSsTmV~AGVyLliR~~pl~~-~~~~~~~~~l~lG~~T~l~aa~~Al~q~DiKkiiAyST  306 (602)
T MTH00108        229 LHPWLPSAME-GPTPVSALLHSSTMVVAGVFLLIRFHPLME-NNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFST  306 (602)
T ss_pred             CHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5342067635-899099999876899860999999988874-17999999999999999999999985231878999988


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r  304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI  383 (478)
Q Consensus       304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl  383 (478)
T Consensus       307 ~SQLGlMm~~iglg~~--~lA~fHL~tHA~FKAlLFL~aG~iIH~~~-~~QDir~mGgl~~~~P~t~~~~~i~slaL~G~  383 (602)
T MTH00108        307 SSQLGLMMVTIGINQP--HLAFLHICTHAFFKAMLFMCSGSIIHNLN-DEQDIRKMGGLFKTLPFTSTALIIGSLALTGM  383 (602)
T ss_pred             HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             9899999999855738--89999999999999999982309998258-85418987597520479999999999998476


Q ss_pred             CHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHH
Q ss_conf             5000067599999999962849999-999999999999999999999649987786556733-21899999999
Q gi|254780867|r  384 PPFAGFFGKYFLLISAVKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE-MRLFIFGSILF  455 (478)
Q Consensus       384 Pp~~GF~sK~~i~~~~~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~  455 (478)
T Consensus       384 PflsGFySKD~IlE~~~~s~~n~~~~~l~~~~~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~e~~~~~~~pl~~L  457 (602)
T MTH00108        384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRL  457 (602)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             32107876899999998656289999999999999999999999999708998888787677967899999999