HHsearch alignment for GI: 254780867 and conserved domain: MTH00199
>MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=587.54 Aligned_cols=443 Identities=36% Similarity=0.627 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998640230158999999999999999999971322100316764100799999999999999
Q gi|254780867|r 10 LRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSII 89 (478)
Q Consensus 10 l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~ 89 (478)
T Consensus 2 ~l~l~PEi~l~~~~~~ll~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~k~~~~~~~~~ 80 (454)
T MTH00199 2 MLILYPEVLLSLVVLSLVIYGVNLSTLKKSVLVLLIV-GLIISFNRQGLFNKVLDGTNGLLLINGWVLISKLIIIIGSIS 80 (454)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2146049999999999999998323202999999999-999999999834452002375134748999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
Q ss_conf 99999999632100224206679999999999873146102212457778877776653200013445555540146204
Q gi|254780867|r 90 IFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFS 169 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g 169 (478)
T Consensus 81 ~~~~~------~~~~~~e~~~l~L~~~~Gm~~~vss~dli~lfl~lEl~sl~~Y~L~~~~r~~~~s~eAalKYfilg~~~ 154 (454)
T MTH00199 81 ILLMG------LKESLFSVPVLILIVALGSLLLVSSINWLSIYLALELQTLSLFILVALKRDSAYSTEAGLKYFVLGAVS 154 (454)
T ss_pred HHHHH------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99984------665626899999999999999998626999999999999999999983689855899999999998788
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 67998898853001000001222211101343100001222211234444432110001210122100123333210000
Q gi|254780867|r 170 SAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPK 249 (478)
Q Consensus 170 ~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~ 249 (478)
T Consensus 155 s~~lL~Gi~liY~~tGs~~~~~i~~~~~~~-------~g~~li~~gl~fK~a~~PfH~W~PDvYegaPt~vta~la~~~K 227 (454)
T MTH00199 155 SGLFLFGCALLYGLTGETSIQGINSLLSGD-------VGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPK 227 (454)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999999999995780499999988645-------7899999999999966323154157757997899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHH
Q ss_conf 023211111244000112221000001222102222000001244544356421112442111111215-7788886430
Q gi|254780867|r 250 FATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYM 328 (478)
Q Consensus 250 ~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~ 328 (478)
T Consensus 228 ia~~~~l~~~~~~--------~~il~~~~~lSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyil~gl~~~~~~g~~~~l~y~ 299 (454)
T MTH00199 228 IGVFSILVQIGPV--------TNVVLWCAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYM 299 (454)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999998889--------99999999999999999998214367999999998999999999975457899999999
Q ss_pred CCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 02320100110000267874087645502104665232114789999865303665000067599999999962849999
Q gi|254780867|r 329 VIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLA 408 (478)
Q Consensus 329 ~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~ 408 (478)
T Consensus 300 ~~y~~~~~~~F~~i~~~~~~----~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~K~~i~~a~i~~g~~~la 375 (454)
T MTH00199 300 IIYVIMSICSFSIILSLKLR----RGLIVELSGLSRKNPVMALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLIC 375 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999999999827----52699987487548999999999999983974120299999999999986959999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999999649987786---------5567332189999999999999997676589999987519
Q gi|254780867|r 409 IVALLSSVISAYYYLRVISIMWFDQSTECV---------VVVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 409 ~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
T Consensus 376 ii~vl~Svis~~YYlRiik~myF~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~ilf~~i~P~~ll~~~~~~a~~L~ 454 (454)
T MTH00199 376 IVAVISSVIAGVYYVRVVQIIYFQADSPLLIWQKVLNREERLDLSKSILIGMTLFFILFLMISPNFLLQITHDATIGLY 454 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999995089962023100000013554678999999999999988080999999999976449