HHsearch alignment for GI: 254780867 and conserved domain: PRK02504
>PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=637.41 Aligned_cols=464 Identities=36% Similarity=0.579 Sum_probs=396.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6299999999999999999998640230158999999999999999999--97132210031676410079999999999
Q gi|254780867|r 8 NDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL--LIMPYEGIGLGGAYISDRFSYFIKAILLM 85 (478)
Q Consensus 8 ~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~--~~~~~~~~~~~~~~~~D~~s~~~~~l~~~ 85 (478)
T Consensus 11 ~n~~ailPeiil~~~~l~~Ll~~l~~~~~~~~~~~~is~~~l~~~~~~l~~~~~~~~~~~f~g~~~~D~~s~~~~~ii~~ 90 (514)
T PRK02504 11 LNAGAILPEGIVLLTLLGVLLVDLIGGRTASRWLPYIAIAGLGAALVLLALQWDNPNPISFLGAFNADNLSIAFRAIIAL 90 (514)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 32879989999999999999999955743007999999999999999999995588752102624436577999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999999999963210022420667999999999987314610221245777887777665320001344555554014
Q gi|254780867|r 86 SSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVL 165 (478)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~ 165 (478)
T Consensus 91 ~~~l~~l~S~~y~~~~~~~~~ef~~llL~~~lG~~~l~~s~dLi~lfv~~El~sl~sY~Li~~~~~~~~s~eAalKYfll 170 (514)
T PRK02504 91 STLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLCGATDLVMIFISLETLSIASYLLSGYMKRDPRSSEAALKYLLI 170 (514)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999986178650599999999999999999971799999999999999999988754997899999999999
Q ss_pred CCHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 6204679988988530010-000012222111013431000012222112344444321100012101221001233332
Q gi|254780867|r 166 GAFSSAFLLYGISFIYGFT-GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244 (478)
Q Consensus 166 ~~~g~~~ll~g~~~~y~~~-gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sall 244 (478)
T Consensus 171 g~~~s~~lL~Gi~llYg~t~g~~~l~~i~~~~~~~-~~~~~~~~l~lil~G~~fK~a~~PfH~WlPDay~gAPtpvsa~l 249 (514)
T PRK02504 171 GAASAAIFLYGSSLLYGLSGGSTQLDAIALALITS-PSLLLALALVFVLAGIAFKIAAVPFHQWTPDVYEGSPTPVVAFL 249 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
T ss_conf 88889999999999999970768899999987558-62899999999999999997416654365457648867899999
Q ss_pred CCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHH
Q ss_conf 1000002321111124400011-2221000001222102222000001244544356421112442111111215-7788
Q gi|254780867|r 245 ATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIV 322 (478)
Q Consensus 245 s~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~ 322 (478)
T Consensus 250 s~~~k~a~~~llir~~~~~~~~~~~~~~~il~ilailSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyillgl~~gt~~g~~ 329 (514)
T PRK02504 250 SVGSKAAGFALAIRLLVTAFPAFDEQWKLLFTVLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYA 329 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999999999999836424788999999999999998889999998774999998998999999999966588999
Q ss_pred HHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 88643002320100110000267874087645502104665232114789999865303665000067599999999962
Q gi|254780867|r 323 AMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR 402 (478)
Q Consensus 323 ~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~ 402 (478)
T Consensus 330 a~i~yl~~y~~~~~~~F~~i~~~~~~~gt--~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if~a~~~~ 407 (514)
T PRK02504 330 SMVLYLLAYLFMNLGAFACVILFSLRTGT--DRISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQA 407 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999974584--4499861968774999999999999999787987999999999999994
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 849999999999999999999999999649987786556733------------21899999999999999976765899
Q gi|254780867|r 403 EFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE------------MRLFIFGSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 403 ~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
T Consensus 408 g~~~la~~~~l~Svis~~YYlRii~~m~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~p~~~~~ 487 (514)
T PRK02504 408 GQYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNYPEINWNLPGMPPLRVGLVLCVIATALAGILSNPLFTLA 487 (514)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 93999999999999999999999999937998444532236898864345776089999999999998352761699998
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780867|r 471 MKIV 474 (478)
Q Consensus 471 ~~~~ 474 (478)
T Consensus 488 ~~av 491 (514)
T PRK02504 488 NTAV 491 (514)
T ss_pred HHHH
T ss_conf 8774