HHsearch alignment for GI: 254780867 and conserved domain: PRK06525
>PRK06525 hydrogenase 4 subunit D; Validated.
Probab=100.00 E-value=0 Score=578.39 Aligned_cols=451 Identities=18% Similarity=0.246 Sum_probs=355.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-H---------HHHHHHHHHHHH
Q ss_conf 862999999999999999999986402301589999999999999999999713221-0---------031676410079
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG-I---------GLGGAYISDRFS 76 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~-~---------~~~~~~~~D~~s 76 (478)
T Consensus 1 M~~L-~ll~illPll~a~l~~~l~~~~~~~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~D~ls 78 (480)
T PRK06525 1 MENL-ALLTLLLPFIGALVVSFLPGRRAAELG-VLFAALATLCMLVLISAFYQAGKVAVTLTLVNVGDVALFGLVIDPVS 78 (480)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHH
T ss_conf 9569-999999999999999998436899999-99999999999999999984898517887530356652256775767
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999632100------22420667999999999987314610221245777887777665320
Q gi|254780867|r 77 YFIKAILLMSSIIIFIKMFSCIYVKPF------SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNR 150 (478)
Q Consensus 77 ~~~~~l~~~~~l~~~~~~~~~~~~~~~------~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~ 150 (478)
T Consensus 79 ~~~~~l~~~~~~l~~lys~~y~~~~~~~~~~~~~~~~f~~~~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li~~~~ 158 (480)
T PRK06525 79 VLILFVVVFLGLLVTIYSTGYMSPKNREHPVHEGTNRYYAFLLLFIGAMAGLVLSSTLLGLLLFFEITGLCSWALISYYQ 158 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999712223336576544189999999999999999980799999999999999999993758
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 00134455555401462046799889885300100000122221110134310000122221123444443211000121
Q gi|254780867|r 151 KSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIP 230 (478)
Q Consensus 151 ~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp 230 (478)
T Consensus 159 ~-~~~~~aa~ky~i~~~~gs~~~l~gi~~ly~~~gt~~~~~l~~~-----~~~~~~~~~~~~l~~~~~K~~~~P~H~WLP 232 (480)
T PRK06525 159 S-DKAQRSALKALLITHIGSLGLYLAAATLFLQTGSFALSALSGL-----HGDLKLLVFGGILFAAWGKSAQLPLQAWLP 232 (480)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 7-8999999999999999999999999999986887389998715-----724899999999999999971545734477
Q ss_pred HHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0122100123333210-000023211111244000112221000001222102222000001244544356421112442
Q gi|254780867|r 231 DVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGY 309 (478)
Q Consensus 231 ~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~ 309 (478)
T Consensus 233 da~~-ap~pvsa~L~~~~~~k~g~y~l~r~~~~~~~~~~~~~~~l~~lg~~t~~~g~~~Al~Q~d~KrlLAYSSisq~G~ 311 (480)
T PRK06525 233 DAME-APTPVSAYLHAASMVKVGVYIFARAILDGGNIPHVIGYVGMVMAIVTMLYGFLMYLPQQDMKRLLAYSTITQLGY 311 (480)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 5346-897588899999999999999999999733149999999999999999999999998521106788869999999
Q ss_pred CCCCCCC----HHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
Q ss_conf 1111112----157788886430023201001100002678740876455021046652321147899998653036650
Q gi|254780867|r 310 ALIGFST----GMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPP 385 (478)
Q Consensus 310 i~~~l~~----~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp 385 (478)
T Consensus 312 i~~gi~~~~~g~~~~~~g~l~~~i~H~~~k~~LFl~aG~i~~~~g--t~~i~~l~Gl~~~~P~~a~~f~i~~lsl~GiPp 389 (480)
T PRK06525 312 MFFGLSLSIFGSRLALEGSIAHIFNHAFAKSLFFLVAGALSYSCG--TRLLPRLRGVLKKMPLVGVGFCVAALAITGVPP 389 (480)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999713565899999999999999999999999989998708--973788659988739999999999999988777
Q ss_pred HHHHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0006759999999996284-----99999999999999999999999996499877865567332189999999999999
Q gi|254780867|r 386 FAGFFGKYFLLISAVKREF-----YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYF 460 (478)
Q Consensus 386 ~~GF~sK~~i~~~~~~~~~-----~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (478)
T Consensus 390 ~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~y~~~~~~~~f~g~~~~~~~~~~~~~~~-m~~~~~~L~~l~ 468 (480)
T PRK06525 390 FNGFFSKFPIFAGGFELSVEYWILLPAMILLLIESVASFAWFLRWFGRVVFGEPSEAVADAAPLPLS-MKLVLIVLIVMS 468 (480)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHHHHH
T ss_conf 6289999999999998576159999999999999999999999999999489997334778999887-999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 997676589
Q gi|254780867|r 461 LIENILNSS 469 (478)
Q Consensus 461 ~~~~~~~~~ 469 (478)
T Consensus 469 i~~Gv~p~P 477 (480)
T PRK06525 469 LISSVIAAP 477 (480)
T ss_pred HHHHHHCCC
T ss_conf 999981531