HHsearch alignment for GI: 254780867 and conserved domain: PRK08667

>PRK08667 hydrogenase membrane subunit; Validated.
Probab=100.00  E-value=0  Score=587.32  Aligned_cols=458  Identities=19%  Similarity=0.275  Sum_probs=365.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHH
Q ss_conf             86299999999999999999998640230158999999999999999999971---------322100316764100799
Q gi|254780867|r    7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIM---------PYEGIGLGGAYISDRFSY   77 (478)
Q Consensus         7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~---------~~~~~~~~~~~~~D~~s~   77 (478)
T Consensus         2 m~~l-~l~~i~lpl~ga~l~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vD~LS~   80 (644)
T PRK08667          2 LAGL-FLGAILLLLAAAVIPLVFRHKNIRVWQSSLLLLIASALLLLFALLVLFTGNPLDIPLWGIAPGLDITFHIDRLAA   80 (644)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECHHHH
T ss_conf             5789-999999999999999982587510699999999999999999999995489838986420699628988556689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             999999999999999999996321002--242066799999999998731461022124577788777766532000134
Q gi|254780867|r   78 FIKAILLMSSIIIFIKMFSCIYVKPFS--CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFS  155 (478)
Q Consensus        78 ~~~~l~~~~~l~~~~~~~~~~~~~~~~--~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~  155 (478)
T Consensus        81 ~fl~lv~~v~~~v~lYs~~Y~~~~~~~~r~~~~~~~~~Lf~~sm~~vv~a~dl~~~~vfwE~m~l~sy~LI~~~~~~~~~  160 (644)
T PRK08667         81 FFIILIGLVSLCVAIYSLGYNEHMKSNERANLLSALTALFILSMLLVVASANTISFLVFWEIMALSSFFLVMNDYQEEET  160 (644)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             99999999999999996288662768631419999999999999999998379999999999999999998400998999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             45555540146204679988988530010000012222111013431000012222112344444321100012101221
Q gi|254780867|r  156 IEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEG  235 (478)
Q Consensus       156 ~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~  235 (478)
T Consensus       161 ~~Aa~ky~i~~~~G~~~ll~g~~~l~~~~Gs~~~~~~~~~~~------~~~l~~~llliGf~~Kag~~P~H~WLP~A~~~  234 (644)
T PRK08667        161 QRAGFFYFVMTQLSTVFLMLGIILLFIQTGSFELSPLGAPSG------SLPLVFLLLFLGFGIKAGIIPFHKWLPYAHPA  234 (644)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
T ss_conf             999999999999999999999999999976188999886421------48999999999999988050269760666678


Q ss_pred             HCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             00123333210000023211111244000112221000001222102222000001244544356421112442111111
Q gi|254780867|r  236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFS  315 (478)
Q Consensus       236 ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~  315 (478)
T Consensus       235 APtpVSALlsgvmvk~gvy~liR~~~~~~~~~~~~~~~ll~lG~iT~l~G~l~Al~Q~DiKrlLAYSSisqiG~i~lglG  314 (644)
T PRK08667        235 SPSPVSALMSGVMLKVAVYGLIRFLMDVLAPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIG  314 (644)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98089999999999999999999999851405899999999999999999999997621899999999999999999998


Q ss_pred             CH------------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             21------------577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r  316 TG------------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI  383 (478)
Q Consensus       316 ~~------------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl  383 (478)
T Consensus       315 ~~~~~~~~g~~~l~~la~~~al~hl~nHa~fKalLFl~aG~v~~~tg--t~~i~~lgGL~k~mP~t~~~f~ig~lai~Gl  392 (644)
T PRK08667        315 LYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATG--TRNIEKMGGLVKRMPYTSALFLVGAVSIAAL  392 (644)
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             74310113511567889999999999999999999999879999718--7029996894432189999999999998737


Q ss_pred             CHHHHHHHHHHHHHHHHHCCH---HH-------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             500006759999999996284---99-------99999999999999999999999649987786556733218999999
Q gi|254780867|r  384 PPFAGFFGKYFLLISAVKREF---YV-------LAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSI  453 (478)
Q Consensus       384 Pp~~GF~sK~~i~~~~~~~~~---~~-------~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  453 (478)
T Consensus       393 PP~~GF~Sk~li~~~~~~~~~~~~~~~~~~~~~~~~~lal~~~la~~~~~k~~g~~Flg~pr~~~~~~a~e~~~~m~~~~  472 (644)
T PRK08667        393 PPFNGFASELLLYESFFQSFSVADPLIKILLFVVLALFALTSALAAACFVKAFGITFLAMPRSQEARSAREVSKPMLIGP  472 (644)
T ss_pred             CHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             20047999999999998545654237999999999999999999999999999986138889854346677981278999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999976765899999
Q gi|254780867|r  454 LFVTGYFLIENILNSSIMKI  473 (478)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~~~  473 (478)
T Consensus       473 ~~la~~~~~~g~~~~~~~~~  492 (644)
T PRK08667        473 AVLAVACLVLGLFSVQIFSL  492 (644)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999646889986