HHsearch alignment for GI: 254780867 and conserved domain: PRK12664
>PRK12664 putative monovalent cation/H+ antiporter subunit D; Reviewed.
Probab=100.00 E-value=0 Score=469.35 Aligned_cols=368 Identities=17% Similarity=0.226 Sum_probs=288.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
T Consensus 28 ~~~~~~~~~~~lv~~~~~~~~~~~~~l~~----~~~~~~~~~e~~~~LlY~gSaLGvV~AgDLitLfIFWElmaisS~~L 103 (530)
T PRK12664 28 YNIGLPVYNYDLVLFIVLSFILSLIFLYI----LPIKNLTFSEMLLYLLYYLSSIAAISSSSLLLVVISFEIMALSAVMI 103 (530)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 23325444432899999999999999999----98233028899999999999999999751999999999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65320001344555554014620467998898853001000001222211101343100001222211234444432110
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
T Consensus 104 I~~~-~t~~s~~Ag~rYl~vh~~gG~iLL~G~~~~~~~~~~~~------------------l~~lliliG~~iKaA~fPl 164 (530)
T PRK12664 104 IAAG-CNGGNMGAVIHYACVHFFSGVLLLVGASGQAVNGDYNG------------------YCKLFFLIGLLINCACFPA 164 (530)
T ss_pred HHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH------------------HHHHHHHHHHHHHHCCCCC
T ss_conf 8718-88246899999999999999999999999975254004------------------9999999999999578844
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00121012210012333321000002321111124400011222100000122210222200000124454435642111
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~ 305 (478)
T Consensus 165 H~WLPdAy~~A~~~~s~llSa~~tK~avY~L~R~f~g--------~~iLi~lG~it~v~G~i~Al~Q~DiKRlLAYSsVs 236 (530)
T PRK12664 165 SSWVVDAYPAASNNGIIVLSLFTTKVAAFVLLLFFQG--------EEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVG 236 (530)
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0101431679963678999999999999999999506--------47999999999999999999987499999999998
Q ss_pred CCCCCCCCCCC---H-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 24421111112---1-5778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 306 HAGYALIGFST---G-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 306 q~G~i~~~l~~---~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
T Consensus 237 QiGymv~giG~~~ig~~~a~~~ai~H~~~H~l~KalLFm~aGaV~~~TGt--~~i~~LGGL~k~MP~Ta~~~lIgalSia 314 (530)
T PRK12664 237 QMGLLITAIGFSYSSSVSVIGIIILQIVLSVVYQTLLFMVADSVINRTRK--FNLNEVGGLFKKMSVEAICSIIAILNMG 314 (530)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999865112217689999999999999999999998799998087--1178855898761199999999999984
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHH-HHHHHHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf 66500006759999999996284999999--99999999999-999999996499877865--56733218999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIV--ALLSSVISAYY-YLRVISIMWFDQSTECVV--VVAKEMRLFIFGSILFV 456 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~--~~~~s~~s~~y-~~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~ 456 (478)
T Consensus 315 G~Pp~sGFvSKsli~~a~~~~~~~~~~~~~l~~~a~~~~~~~~gik~~~f~f~~~~~~~~~~~~~p~~m~~aM~i~a~lc 394 (530)
T PRK12664 315 AFPGTAGFVSKSLITHSIDTTDLTNVLYKKLFLICSLLLFASVGLKFFWYAFISKSRSKPEANKVKQGSKLSMIILVLIC 394 (530)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68852207888999998775785699999999997689986158771356776167778887887562899999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999997676
Q gi|254780867|r 457 TGYFLIENIL 466 (478)
Q Consensus 457 ~~~~~~~~~~ 466 (478)
T Consensus 395 i~~Gv~~~~l 404 (530)
T PRK12664 395 VVLGVFGSYL 404 (530)
T ss_pred HHCCCCCCCC
T ss_conf 6136474124