HHsearch alignment for GI: 254780867 and conserved domain: TIGR00944
>TIGR00944 2a6301s04 Multicomponent K+:H+antiporter; InterPro: IPR004775 A group of uncharacterised proteins some of which are similar to various chains of the NADH-ubiquinone/plastoquinone (complex I).; GO: 0015386 potassium:hydrogen antiporter activity, 0006812 cation transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=449.23 Aligned_cols=444 Identities=19% Similarity=0.356 Sum_probs=370.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH--HHHHHHHHHCC-----C----------CHHHHHHHHHHH
Q ss_conf 999999999999999998640230158999999999999--99999997132-----2----------100316764100
Q gi|254780867|r 12 LCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLS--IALFFLLIMPY-----E----------GIGLGGAYISDR 74 (478)
Q Consensus 12 lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~--i~l~~~~~~~~-----~----------~~~~~~~~~~D~ 74 (478)
T Consensus 3 liL~iliP~~~AilLifi~krd--~~lkr~~~~a~tl~~~v~s~Il~~~v~~GtGsl~G~~~~~LG~WkAPygIVlvlD~ 80 (504)
T TIGR00944 3 LILAILIPVLVAILLIFINKRD--RILKRIIALASTLVVLVLSIILLRLVVAGTGSLKGSGVLELGNWKAPYGIVLVLDR 80 (504)
T ss_pred CHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 0388899999998862167750--68888998889999999999999998413676577525524871061799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 79999999999999999999999632100224206679999999999873146102212457778877776653200013
Q gi|254780867|r 75 FSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVF 154 (478)
Q Consensus 75 ~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~ 154 (478)
T Consensus 81 fsaLl~~~t~ii~l~v~lYS~~~~g~~rER-~~yys~vqfllaG~~GAFlTGDlFNlfVFFE~~L~aSY~Ll-v~Gstki 158 (504)
T TIGR00944 81 FSALLVLTTSIIALLVQLYSYARVGTKRER-YYYYSLVQFLLAGVNGAFLTGDLFNLFVFFELLLIASYGLL-VLGSTKI 158 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCE
T ss_conf 999999999999999998625652225550-57899999999987557785479999999999999999999-9769720
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 445555540146204679988988530010000012222111013--431000012222112344444321100012101
Q gi|254780867|r 155 SIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG--HRSFVLIVGVVLILVGLFFKMALVPFHMWIPDV 232 (478)
Q Consensus 155 ~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a 232 (478)
T Consensus 159 ~l~e~lkYi~vN~vsSalFviGV~~lY~v~GTLNmADls~Kla~Le~~~~gLv~~~~~ll~~vF~~KaG~fPl~fWLP~a 238 (504)
T TIGR00944 159 QLKEGLKYIVVNVVSSALFVIGVSLLYAVAGTLNMADLSTKLAALEARSRGLVEVVSVLLLLVFLVKAGVFPLYFWLPTA 238 (504)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCC
T ss_conf 22102034457789999999999999999877569999999852688876235789999999998733756300003200
Q ss_pred HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC----C-CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 221001233332100000232111112440001122----2-10000012221022220000012445443564211124
Q gi|254780867|r 233 YEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS----G-LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 233 ~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~----~-~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
T Consensus 239 YyApp~pi~a~FGAlLTKVG~YaI~R~~~L~F~~~~Gass~F~~~~~~~la~LTiiFG~iG~lAy~n~~ki~~Ynv~~av 318 (504)
T TIGR00944 239 YYAPPAPIAALFGALLTKVGIYAIIRLFLLVFGDDAGASSAFGHELLVFLALLTIIFGGIGVLAYANVKKIVLYNVLVAV 318 (504)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11142469998768998899999999999986321045431379999999999999867999999987699999999998
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCC----CCCHHHCCCCCC-------------CCHH
Q ss_conf 42111111215-77888864300232010011000026787408764----550210466523-------------2114
Q gi|254780867|r 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNI----QNISDLAGLSRQ-------------DIFL 369 (478)
Q Consensus 308 G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~----~~i~~l~gl~~~-------------~P~~ 369 (478)
T Consensus 319 GviL~gVa~~t~~~~~GAiyYl~~d~L~~gAlFlLig~~i~~~gtGadvlaa~l~~~GglikreeeeevGaaiPGtypVL 398 (504)
T TIGR00944 319 GVILVGVALGTDASLAGAIYYLVHDMLVKGALFLLIGLLIRLTGTGADVLAATLEKYGGLIKREEEEEVGAAIPGTYPVL 398 (504)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
T ss_conf 89997664057147899999999999999999999999997306763788887998389643211101245577510378
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 789999865303665000067599999999962-----------849999999999999999999999999649987-78
Q gi|254780867|r 370 TCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR-----------EFYVLAIVALLSSVISAYYYLRVISIMWFDQST-EC 437 (478)
Q Consensus 370 ~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~-----------~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~-~~ 437 (478)
T Consensus 399 Gw~Ffi~AlsLAGiPPLSGF~gKF~i~~g~F~~Paaelatamsag~~t~~~l~lLSsL~vlysv~RIfi~~Fwg~~kG~~ 478 (504)
T TIGR00944 399 GWSFFIAALSLAGIPPLSGFIGKFAIVEGLFDRPAAELATAMSAGDYTIVVLVLLSSLVVLYSVLRIFIRTFWGEEKGEI 478 (504)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999985577740257788887504445417899988642689999999999999999999998764126757888
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6556733218999999999999
Q gi|254780867|r 438 VVVVAKEMRLFIFGSILFVTGY 459 (478)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~ 459 (478)
T Consensus 479 p~~~~~~~k~l~~~a~~~~~ls 500 (504)
T TIGR00944 479 PRVNKIEVKPLVVLAAVAILLS 500 (504)
T ss_pred CCCCEEEEEHHHHHHHHHHHHH
T ss_conf 9853366402799999999999