Query gi|254780867|ref|YP_003065280.1| NADH dehydrogenase subunit N [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 478
No_of_seqs 147 out of 7195
Neff 8.0
Searched_HMMs 39220
Date Mon May 30 00:49:15 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780867.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05777 NADH dehydrogenase su 100.0 0 0 636.9 23.6 470 5-478 3-478 (478)
2 PRK02504 NAD(P)H-quinone oxido 100.0 0 0 637.4 19.1 464 8-474 11-491 (514)
3 CHL00049 ndhB NADH dehydrogena 100.0 0 0 634.0 21.0 469 6-476 11-495 (498)
4 TIGR01974 NDH_I_L proton-trans 100.0 0 0 624.4 20.2 447 16-466 7-514 (691)
5 PRK12667 putative monovalent c 100.0 0 0 616.2 20.6 466 9-477 4-504 (517)
6 PRK07691 putative monovalent c 100.0 0 0 612.7 20.0 466 7-478 3-485 (498)
7 PRK08377 NADH dehydrogenase su 100.0 0 0 610.5 20.1 455 16-478 9-477 (493)
8 PRK08668 NADH dehydrogenase su 100.0 0 0 613.6 17.1 406 65-475 62-482 (616)
9 PRK12662 putative monovalent c 100.0 0 0 609.3 17.8 464 8-477 2-489 (491)
10 PRK12663 putative monovalent c 100.0 0 0 602.9 21.7 462 11-477 4-480 (497)
11 PRK08375 putative monovalent c 100.0 0 0 604.9 19.4 464 7-475 2-481 (481)
12 TIGR01770 NDH_I_N proton-trans 100.0 0 0 607.3 15.9 456 11-466 2-490 (491)
13 PRK12645 monovalent cation/H+ 100.0 0 0 598.7 20.5 457 16-476 8-507 (800)
14 PRK06590 NADH dehydrogenase su 100.0 0 0 594.2 22.4 453 7-466 1-471 (619)
15 COG1007 NuoN NADH:ubiquinone o 100.0 0 0 593.3 22.9 470 7-478 2-475 (475)
16 PRK08376 putative monovalent c 100.0 0 0 594.9 18.8 459 14-478 9-500 (513)
17 PRK06521 hydrogenase 4 subunit 100.0 0 0 591.9 19.4 407 65-476 70-504 (670)
18 PRK12649 putative monovalent c 100.0 0 0 590.2 19.4 458 14-476 9-504 (800)
19 PRK12647 putative monovalent c 100.0 0 0 591.6 17.0 407 65-476 55-469 (761)
20 TIGR00940 2a6301s01 monovalent 100.0 0 0 589.6 18.5 451 17-471 6-500 (809)
21 TIGR01972 NDH_I_M proton-trans 100.0 0 0 590.2 17.1 453 17-477 6-528 (532)
22 MTH00199 ND2 NADH dehydrogenas 100.0 0 0 587.5 19.1 443 10-478 2-454 (454)
23 PRK12648 putative monovalent c 100.0 0 0 587.6 19.1 457 14-475 5-484 (950)
24 PRK06458 hydrogenase 4 subunit 100.0 0 0 587.3 19.1 424 51-477 46-489 (491)
25 PRK08667 hydrogenase membrane 100.0 0 0 587.3 18.8 458 7-473 2-492 (644)
26 PRK12666 putative monovalent c 100.0 0 0 586.6 19.3 466 5-477 1-486 (509)
27 PRK12665 putative monovalent c 100.0 0 0 582.6 19.3 464 7-477 1-511 (524)
28 PRK07390 NAD(P)H-quinone oxido 100.0 0 0 580.9 20.2 454 4-465 2-473 (615)
29 PRK06277 hydrogenase subunit F 100.0 0 0 578.3 19.2 403 67-477 65-476 (479)
30 PRK12646 putative monovalent c 100.0 0 0 580.1 17.1 400 65-468 69-498 (800)
31 PRK12644 putative monovalent c 100.0 0 0 578.2 18.5 405 64-475 64-480 (968)
32 PRK06525 hydrogenase 4 subunit 100.0 0 0 578.4 16.6 451 7-469 1-477 (480)
33 PRK07376 NAD(P)H-quinone oxido 100.0 0 0 574.0 20.4 365 66-436 83-460 (667)
34 PRK05846 NADH dehydrogenase su 100.0 0 0 571.1 21.1 451 17-477 11-486 (495)
35 PRK06473 NAD(P)H-quinone oxido 100.0 0 0 568.2 21.6 400 69-477 74-481 (500)
36 MTH00204 ND4 NADH dehydrogenas 100.0 0 0 571.1 18.0 397 69-474 78-479 (486)
37 MTH00210 ND5 NADH dehydrogenas 100.0 0 0 566.6 21.7 434 17-456 7-461 (618)
38 MTH00217 ND4 NADH dehydrogenas 100.0 0 0 569.9 18.3 396 70-474 76-476 (482)
39 CHL00025 ndhF NADH dehydrogena 100.0 0 0 569.0 18.7 365 65-435 82-459 (738)
40 PRK07363 NAD(P)H-quinone oxido 100.0 0 0 567.1 20.1 400 69-477 74-481 (499)
41 PRK02546 NAD(P)H-quinone oxido 100.0 0 0 570.1 16.7 399 69-477 85-499 (531)
42 CHL00011 ndhD NADH dehydrogena 100.0 0 0 566.5 19.2 399 69-477 79-493 (500)
43 PRK06589 putative monovalent c 100.0 0 0 569.0 16.6 455 6-472 7-482 (484)
44 PRK12650 putative monovalent c 100.0 0 0 566.3 18.5 404 66-476 71-483 (969)
45 COG1009 NuoL NADH:ubiquinone o 100.0 0 0 564.8 19.7 390 66-461 66-464 (606)
46 PRK08676 hydrogenase membrane 100.0 0 0 565.7 17.7 429 44-477 31-483 (486)
47 MTH00020 ND5 NADH dehydrogenas 100.0 0 0 559.1 22.9 434 16-458 6-460 (608)
48 MTH00032 ND5 NADH dehydrogenas 100.0 0 0 556.6 20.6 419 16-439 6-493 (677)
49 PRK12668 putative monovalent c 100.0 0 0 560.6 14.1 427 12-469 5-439 (569)
50 PRK12561 NAD(P)H-quinone oxido 100.0 0 0 558.8 15.4 402 66-477 51-468 (495)
51 PRK08042 formate hydrogenlyase 100.0 0 0 550.7 15.4 399 64-476 50-470 (593)
52 MTH00206 ND4 NADH dehydrogenas 100.0 0 0 544.9 16.1 428 34-468 19-451 (452)
53 MTH00014 ND4 NADH dehydrogenas 100.0 0 0 541.1 18.9 412 53-470 36-451 (451)
54 COG0651 HyfB Formate hydrogenl 100.0 0 0 539.8 19.0 405 63-470 64-480 (504)
55 MTH00114 consensus 100.0 0 0 528.6 23.5 384 65-459 71-457 (600)
56 MTH00004 ND5 NADH dehydrogenas 100.0 0 0 529.8 21.8 381 65-457 75-458 (604)
57 PRK06591 putative monovalent c 100.0 0 0 535.1 14.4 412 7-437 3-432 (433)
58 MTH00150 ND4 NADH dehydrogenas 100.0 0 0 533.2 15.2 429 32-468 13-445 (447)
59 MTH00066 ND5 NADH dehydrogenas 100.0 0 0 525.7 21.5 382 64-457 72-456 (598)
60 MTH00211 ND5 NADH dehydrogenas 100.0 0 0 526.7 20.5 381 65-456 67-450 (595)
61 MTH00044 ND4 NADH dehydrogenas 100.0 0 0 527.9 17.4 401 63-466 50-457 (460)
62 COG1008 NuoM NADH:ubiquinone o 100.0 0 0 519.3 18.7 402 66-477 73-482 (497)
63 MTH00068 ND4 NADH dehydrogenas 100.0 0 0 517.3 18.6 403 64-469 50-457 (458)
64 MTH00137 ND5 NADH dehydrogenas 100.0 0 0 514.2 21.6 385 64-458 78-465 (611)
65 MTH00124 ND4 NADH dehydrogenas 100.0 0 0 515.4 17.7 405 60-467 46-455 (457)
66 PRK07234 putative monovalent c 100.0 0 0 519.7 13.3 387 7-435 1-391 (456)
67 MTH00110 ND4 NADH dehydrogenas 100.0 0 0 513.0 16.8 413 54-469 40-457 (459)
68 MTH00208 ND5 NADH dehydrogenas 100.0 0 0 502.8 17.1 386 65-458 100-488 (631)
69 MTH00108 ND5 NADH dehydrogenas 100.0 0 0 499.3 20.4 380 65-455 75-457 (602)
70 MTH00196 ND2 NADH dehydrogenas 100.0 0 0 510.1 8.3 352 115-478 2-365 (365)
71 MTH00205 ND4 NADH dehydrogenas 100.0 0 0 498.7 16.6 405 58-466 42-450 (452)
72 MTH00127 ND4 NADH dehydrogenas 100.0 0 0 496.3 18.4 403 64-469 51-458 (459)
73 MTH00165 ND5 NADH dehydrogenas 100.0 0 0 491.2 14.5 390 63-464 41-432 (571)
74 MTH00209 ND5 NADH dehydrogenas 100.0 0 0 484.2 14.8 388 64-465 43-432 (565)
75 MTH00163 ND4 NADH dehydrogenas 100.0 0 0 480.0 16.5 372 57-438 39-411 (446)
76 MTH00151 ND5 NADH dehydrogenas 100.0 0 0 480.7 15.3 387 64-465 46-434 (566)
77 MTH00207 ND5 NADH dehydrogenas 100.0 0 0 474.6 15.4 391 64-469 47-439 (572)
78 PRK06459 hydrogenase 4 subunit 100.0 0 0 474.9 14.8 356 69-451 38-414 (578)
79 MTH00095 ND5 NADH dehydrogenas 100.0 0 0 466.9 16.8 381 61-462 32-414 (527)
80 PRK12664 putative monovalent c 100.0 0 0 469.3 9.5 368 66-466 28-404 (530)
81 TIGR00944 2a6301s04 Multicompo 100.0 0 0 449.2 15.8 444 12-459 3-500 (504)
82 TIGR01960 ndhF3_CO2 NAD(P)H de 100.0 0 0 441.8 16.7 457 5-469 3-477 (613)
83 pfam00361 Oxidored_q1 NADH-Ubi 100.0 0 0 452.9 -3.5 268 125-398 1-269 (270)
84 MTH00200 ND2 NADH dehydrogenas 100.0 0 0 437.9 9.4 307 106-439 4-310 (343)
85 MTH00198 ND2 NADH dehydrogenas 100.0 0 0 442.3 2.3 377 88-472 154-591 (596)
86 MTH00112 ND2 NADH dehydrogenas 100.0 0 0 434.3 9.0 303 108-437 5-307 (345)
87 MTH00096 consensus 100.0 0 0 427.4 11.9 343 63-437 18-361 (476)
88 MTH00041 ND2 NADH dehydrogenas 100.0 0 0 431.5 7.5 303 106-435 2-304 (350)
89 MTH00070 ND2 NADH dehydrogenas 100.0 0 0 424.5 9.4 305 106-437 4-308 (346)
90 MTH00063 ND5 NADH dehydrogenas 100.0 0 0 420.9 11.9 347 65-437 33-380 (519)
91 MTH00105 ND2 NADH dehydrogenas 100.0 0 0 424.2 7.3 301 105-432 3-303 (345)
92 MTH00135 ND2 NADH dehydrogenas 100.0 0 0 413.0 7.9 300 108-435 6-305 (347)
93 MTH00094 ND4 NADH dehydrogenas 100.0 0 0 406.9 13.4 354 66-444 36-390 (409)
94 MTH00144 ND2 NADH dehydrogenas 100.0 0 0 413.0 5.1 305 105-445 5-309 (329)
95 MTH00011 ND2 NADH dehydrogenas 100.0 0 0 410.1 6.7 327 107-463 7-333 (333)
96 MTH00197 ND2 NADH dehydrogenas 100.0 0 0 395.1 7.9 304 107-445 3-306 (325)
97 PRK08168 NADH dehydrogenase su 100.0 0 0 384.6 16.4 280 65-349 59-338 (514)
98 MTH00160 ND2 NADH dehydrogenas 100.0 0 0 391.4 8.0 308 108-450 6-313 (336)
99 KOG4845 consensus 100.0 0 0 370.6 13.8 396 65-469 51-450 (452)
100 PRK08601 NADH dehydrogenase su 100.0 0 0 370.2 14.1 301 49-355 44-345 (506)
101 MTH00062 ND4 NADH dehydrogenas 100.0 0 0 364.2 14.0 350 65-433 38-388 (419)
102 KOG4668 consensus 100.0 0 0 294.0 10.9 312 105-429 3-316 (355)
103 PRK06588 putative monovalent c 100.0 4.3E-44 0 256.5 0.3 311 65-404 13-327 (504)
104 MTH00091 ND2 NADH dehydrogenas 99.4 5.1E-14 1.3E-18 93.4 3.7 234 121-422 6-241 (273)
105 MTH00059 ND2 NADH dehydrogenas 98.2 1.1E-06 2.9E-11 53.5 3.8 257 120-431 19-280 (288)
106 PRK12663 putative monovalent c 97.0 0.0095 2.4E-07 32.2 9.6 152 319-474 324-481 (497)
107 pfam10125 NADHdeh_related NADH 96.8 0.00068 1.7E-08 38.4 1.9 113 115-233 78-190 (219)
108 COG4078 Predicted membrane pro 96.6 0.00042 1.1E-08 39.6 0.0 117 113-234 76-192 (221)
109 pfam00662 Oxidored_q1_N NADH-U 90.5 0.15 3.9E-06 25.7 1.9 50 63-113 12-61 (62)
110 pfam00420 Oxidored_q2 NADH-ubi 83.9 2.3 5.8E-05 19.3 6.4 83 110-192 5-91 (96)
111 PRK06076 NADH dehydrogenase su 81.3 2.9 7.4E-05 18.8 8.3 90 144-235 132-224 (335)
112 COG0650 HyfC Formate hydrogenl 80.0 1.1 2.7E-05 21.1 1.8 75 153-227 124-201 (309)
113 pfam00146 NADHdh NADH dehydrog 75.5 4.4 0.00011 17.8 4.6 92 136-227 107-200 (309)
114 PRK05715 NADH dehydrogenase su 71.5 5.5 0.00014 17.2 5.0 81 112-193 11-95 (99)
115 MTH00071 ND1 NADH dehydrogenas 65.3 3.2 8.1E-05 18.5 1.3 99 135-235 111-211 (322)
116 PRK10133 L-fucose transporter; 57.1 11 0.00027 15.7 5.9 87 290-392 319-406 (438)
117 COG0713 NuoK NADH:ubiquinone o 56.9 11 0.00028 15.6 5.0 83 111-194 11-97 (100)
118 MTH00134 ND1 NADH dehydrogenas 56.4 11 0.00028 15.6 6.3 103 131-235 108-212 (324)
119 CHL00015 ndhE NADH dehydrogena 56.2 11 0.00028 15.6 5.2 82 112-193 11-97 (101)
120 MTH00111 ND1 NADH dehydrogenas 51.0 7.5 0.00019 16.5 1.2 95 133-227 109-205 (323)
121 MTH00143 ND1 NADH dehydrogenas 48.1 15 0.00039 14.9 4.3 92 136-227 108-201 (306)
122 COG1005 NuoH NADH:ubiquinone o 47.8 15 0.00039 14.8 9.9 98 136-235 121-221 (332)
123 MTH00159 consensus 47.7 15 0.00039 14.8 5.5 94 133-226 103-198 (307)
124 MTH00195 ND1 NADH dehydrogenas 45.4 17 0.00043 14.6 4.1 91 137-227 110-202 (307)
125 MTH00193 ND1 NADH dehydrogenas 45.3 17 0.00043 14.6 4.9 100 134-235 107-208 (306)
126 PRK04288 antiholin-like protei 38.2 22 0.00056 14.0 7.1 118 9-137 2-121 (231)
127 MTH00218 ND1 NADH dehydrogenas 37.7 22 0.00057 13.9 5.0 93 135-227 109-203 (314)
128 pfam01059 Oxidored_q5_N NADH-u 37.3 23 0.00058 13.9 11.4 53 64-116 51-103 (110)
129 MTH00104 ND1 NADH dehydrogenas 36.6 23 0.00059 13.8 5.3 93 135-227 106-200 (318)
130 pfam11455 DUF3018 Protein of u 35.8 10 0.00026 15.8 -0.0 15 219-233 14-28 (65)
131 pfam07830 PP2C_C Protein serin 35.1 25 0.00063 13.7 2.8 34 368-401 47-80 (81)
132 MTH00054 ND1 NADH dehydrogenas 34.9 25 0.00064 13.7 6.6 93 135-227 110-204 (321)
133 PRK10369 heme lyase subunit Nr 26.5 35 0.0009 12.9 10.2 25 287-311 311-335 (552)
134 TIGR03145 cyt_nit_nrfE cytochr 24.9 38 0.00096 12.7 9.9 38 274-311 315-352 (628)
135 PRK08388 putative monovalent c 24.6 38 0.00098 12.7 5.7 39 108-146 6-44 (117)
136 PRK09921 permease DsdX; Provis 24.5 39 0.00098 12.7 3.5 16 131-146 114-129 (445)
137 MTH00180 ND4L NADH dehydrogena 23.3 41 0.001 12.5 5.4 81 112-192 10-94 (99)
138 pfam02447 GntP_permease GntP f 22.0 43 0.0011 12.4 5.0 23 71-93 50-72 (441)
139 pfam08690 GET2 GET complex sub 20.6 46 0.0012 12.2 1.8 24 124-147 207-230 (298)
No 1
>PRK05777 NADH dehydrogenase subunit N; Provisional
Probab=100.00 E-value=0 Score=636.91 Aligned_cols=470 Identities=39% Similarity=0.679 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 77862999999999999999999986402301589999999999999999--9997132210031676410079999999
Q gi|254780867|r 5 SFINDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALF--FLLIMPYEGIGLGGAYISDRFSYFIKAI 82 (478)
Q Consensus 5 ~~~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~--~~~~~~~~~~~~~~~~~~D~~s~~~~~l 82 (478)
....|+.+++|++++..+++..++.+.+.+++++................ .....+.+...+++.+.+|+++..+..+
T Consensus 3 ~~~~~~~~llP~lill~~al~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~ls~~~~~l 82 (478)
T PRK05777 3 LMSLNLQLLLPELILLIGALALLLVDLFIGRRNRRLTATLAVAGLVVALVSLLFVASGGTGVAFNGMFVVDGFALFLKGL 82 (478)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECHHHHHHHHH
T ss_conf 03710999999999999999999999975403368999999999999999999980787520312014775678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999963210022420667999999999987314610221245777887777665320001344555554
Q gi|254780867|r 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKY 162 (478)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky 162 (478)
....+..+.+++.++.++ +++||+.++++...|+++++.|+|++++|++||++++++|.|+++|++++++.||++||
T Consensus 83 ~~~~~~~~~l~s~~~~~~---~~~~f~~l~l~~~~g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~s~eAa~ky 159 (478)
T PRK05777 83 ILLASALTLVLAREYLKD---RNGEFYLLVLFAVLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKY 159 (478)
T ss_pred HHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999999999999999866---77659999999999999999983699999999999999998798727988999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 01462046799889885300100000122221110134-31000012222112344444321100012101221001233
Q gi|254780867|r 163 FVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH-RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMT 241 (478)
Q Consensus 163 ~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~-~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~s 241 (478)
++++.+|+.+++.|+.++|..+||+|++++.....+.. ++.....+..++++|+++|+|++|||.|+||+|++||+|+|
T Consensus 160 ~l~~~~~s~~lL~gi~~ly~~tGs~~~~~l~~~~~~~~~~~~~~~~~~~l~l~g~~~K~a~~PfH~WlPday~~APt~vs 239 (478)
T PRK05777 160 FVLGALASGFLLYGMSLLYGATGSLSLAGIAKALADGMLNSLLLLFGLVFLLAGLAFKLSAVPFHMWTPDVYEGAPTPVT 239 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHH
T ss_conf 99979999999999999998819974999999875366541899999999999999872737656141436358981687
Q ss_pred CCCCCCEECCCCCCCCCCCCCCC-CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-H
Q ss_conf 33210000023211111244000-112221000001222102222000001244544356421112442111111215-7
Q gi|254780867|r 242 AFLATIPKFATTMALCRITSVFW-PMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-L 319 (478)
Q Consensus 242 alls~~~~~~~~~~l~r~~~~~~-~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~ 319 (478)
+++|+++|+++++.++|+..... +..+.+..++.++|++|+++|++.|++|+|.||++|||||+|+||+++|++.++ .
T Consensus 240 a~ls~~~k~a~~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~~~g~l~Al~Q~d~KRlLAYSsIs~~G~il~gi~~~~~~ 319 (478)
T PRK05777 240 AFLATAPKIAAFAVLLRLFYVAFGPLSEDWQQVLAIIAILSMIVGNLAAISQTNIKRLLAYSSIAHMGFLLVGLAAGTVA 319 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 89888999999999999999861544799999999999999999999999886064788767986463999999972688
Q ss_pred HHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78888643002320100110000267874087645502104665232114789999865303665000067599999999
Q gi|254780867|r 320 GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~ 399 (478)
+..++++|+++|++.|.++|.+++.+++++++ .||++|++|+.|++|.++.++.++.+|++|+||++||+|||+++++.
T Consensus 320 ~~~~~~~~~~~h~~~~~~lF~~~~~l~~~~~~-~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPp~~GF~~K~~i~~~~ 398 (478)
T PRK05777 320 GYSAAMFYLLAYLFMTLGAFGVILLLSRKGFE-AESIDDFAGLNKRSPVLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAA 398 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999999999999999999965797-03099864323249389999999999980885213088999999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 96284999999999999999999999999964998778655673-32189999999999999997676589999987519
Q gi|254780867|r 400 VKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAK-EMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 400 ~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
++++.++++++.+++|+++++||+|+++.+|++||+++..+.++ .+...+....+.++.++++|+++.+..++.++.+|
T Consensus 399 ~~~~~~~l~~~~~~~s~is~~Yylri~~~~f~~~~~~~~~~~~~~~~~~~~~i~a~~~i~~Gi~P~~ll~~~~~aa~~lf 478 (478)
T PRK05777 399 VEAGLWWLAVIGVLNSAIGAFYYLRVIKVMYFDEPEGEPRDAPSNLRLVVLSVSALLVLVLGILPQPLLDLAVQAARLLF 478 (478)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97484999999999999999999999999932899854467887158999999999999999537999999999999749
No 2
>PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional
Probab=100.00 E-value=0 Score=637.41 Aligned_cols=464 Identities=36% Similarity=0.579 Sum_probs=396.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6299999999999999999998640230158999999999999999999--97132210031676410079999999999
Q gi|254780867|r 8 NDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL--LIMPYEGIGLGGAYISDRFSYFIKAILLM 85 (478)
Q Consensus 8 ~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~--~~~~~~~~~~~~~~~~D~~s~~~~~l~~~ 85 (478)
-|...++||+++..+++..++.+.+.+|++.+.....+...+..+.... .....+...+.+.+..|+++..+..++..
T Consensus 11 ~n~~ailPeiil~~~~l~~Ll~~l~~~~~~~~~~~~is~~~l~~~~~~l~~~~~~~~~~~f~g~~~~D~~s~~~~~ii~~ 90 (514)
T PRK02504 11 LNAGAILPEGIVLLTLLGVLLVDLIGGRTASRWLPYIAIAGLGAALVLLALQWDNPNPISFLGAFNADNLSIAFRAIIAL 90 (514)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 32879989999999999999999955743007999999999999999999995588752102624436577999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999999999963210022420667999999999987314610221245777887777665320001344555554014
Q gi|254780867|r 86 SSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVL 165 (478)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~ 165 (478)
++.++.+++.+|.++++.+..|||.+++++..|++.++.|+|++++|++||++++++|.|++++++|+++.||++||+++
T Consensus 91 ~~~l~~l~S~~y~~~~~~~~~ef~~llL~~~lG~~~l~~s~dLi~lfv~~El~sl~sY~Li~~~~~~~~s~eAalKYfll 170 (514)
T PRK02504 91 STLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLCGATDLVMIFISLETLSIASYLLSGYMKRDPRSSEAALKYLLI 170 (514)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999986178650599999999999999999971799999999999999999988754997899999999999
Q ss_pred CCHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 6204679988988530010-000012222111013431000012222112344444321100012101221001233332
Q gi|254780867|r 166 GAFSSAFLLYGISFIYGFT-GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244 (478)
Q Consensus 166 ~~~g~~~ll~g~~~~y~~~-gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sall 244 (478)
+.+|+.+++.|+.++|..+ |+++++++.....+. ++.....+..+++.|+++|++++|||.|+||+||+||+|+++++
T Consensus 171 g~~~s~~lL~Gi~llYg~t~g~~~l~~i~~~~~~~-~~~~~~~~l~lil~G~~fK~a~~PfH~WlPDay~gAPtpvsa~l 249 (514)
T PRK02504 171 GAASAAIFLYGSSLLYGLSGGSTQLDAIALALITS-PSLLLALALVFVLAGIAFKIAAVPFHQWTPDVYEGSPTPVVAFL 249 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
T ss_conf 88889999999999999970768899999987558-62899999999999999997416654365457648867899999
Q ss_pred CCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHH
Q ss_conf 1000002321111124400011-2221000001222102222000001244544356421112442111111215-7788
Q gi|254780867|r 245 ATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIV 322 (478)
Q Consensus 245 s~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~ 322 (478)
|+.+|+++++.++|+.....+. .+.|..++.++|++|+++|++.|++|+|+||++|||||+|+||+++|++.++ .|+.
T Consensus 250 s~~~k~a~~~llir~~~~~~~~~~~~~~~il~ilailSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyillgl~~gt~~g~~ 329 (514)
T PRK02504 250 SVGSKAAGFALAIRLLVTAFPAFDEQWKLLFTVLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYA 329 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999999999999836424788999999999999998889999998774999998998999999999966588999
Q ss_pred HHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 88643002320100110000267874087645502104665232114789999865303665000067599999999962
Q gi|254780867|r 323 AMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR 402 (478)
Q Consensus 323 ~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~ 402 (478)
++++|+++|++.|.++|.+++.+++++|+ +|++|++|+.|++|.++.++.++.+|++|+||++||+|||+++.+.+++
T Consensus 330 a~i~yl~~y~~~~~~~F~~i~~~~~~~gt--~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if~a~~~~ 407 (514)
T PRK02504 330 SMVLYLLAYLFMNLGAFACVILFSLRTGT--DRISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQA 407 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999974584--4499861968774999999999999999787987999999999999994
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 849999999999999999999999999649987786556733------------21899999999999999976765899
Q gi|254780867|r 403 EFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE------------MRLFIFGSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 403 ~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
+.+|++++.+++|+++.+||+|+++.+|++||+|..+..++. ....+..+.+..+..+++|+++.+..
T Consensus 408 g~~~la~~~~l~Svis~~YYlRii~~m~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~p~~~~~ 487 (514)
T PRK02504 408 GQYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNYPEINWNLPGMPPLRVGLVLCVIATALAGILSNPLFTLA 487 (514)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 93999999999999999999999999937998444532236898864345776089999999999998352761699998
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780867|r 471 MKIV 474 (478)
Q Consensus 471 ~~~~ 474 (478)
.+.+
T Consensus 488 ~~av 491 (514)
T PRK02504 488 NTAV 491 (514)
T ss_pred HHHH
T ss_conf 8774
No 3
>CHL00049 ndhB NADH dehydrogenase subunit 2
Probab=100.00 E-value=0 Score=634.00 Aligned_cols=469 Identities=33% Similarity=0.576 Sum_probs=408.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78629999999999999999999864023015899999999999999999997--1322100316764100799999999
Q gi|254780867|r 6 FINDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI--MPYEGIGLGGAYISDRFSYFIKAIL 83 (478)
Q Consensus 6 ~~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~--~~~~~~~~~~~~~~D~~s~~~~~l~ 83 (478)
+..|+..++||+++..+++.+++.+.+.+++++......+...+..+...... ...+...+++.++.|+++..+..++
T Consensus 11 ~~~~~~~ilPeiil~~~~~~~ll~~~~~~~~~~~~~~~ls~~~l~~~~~~l~~~~~~~~~~~f~g~~~~D~~s~~~~~ii 90 (498)
T CHL00049 11 LLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNFNEIFRFLI 90 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHH
T ss_conf 74557999899999999999999999636541169999999999999999999658986543466168765889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999999999632100224206679999999999873146102212457778877776653200013445555540
Q gi|254780867|r 84 LMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYF 163 (478)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~ 163 (478)
.+++.++..++.++.+.++.++.||+.++++...|++.++.|+|++++|++||++++++|.|++++++|+++.||++||+
T Consensus 91 ~~~~~l~~l~s~~y~~~~~~~~~Ef~~l~l~a~lG~~~l~~a~dl~~lfl~lEl~sl~sY~Lv~~~~~~~~s~eAalKYf 170 (498)
T CHL00049 91 LLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYL 170 (498)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999999999975677664899999999998999998627999999999999999999894337867899999999
Q ss_pred CCCCHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 146204679988988530010-000012222111013--43100001222211234444432110001210122100123
Q gi|254780867|r 164 VLGAFSSAFLLYGISFIYGFT-GCTGFSQIATSLFIG--HRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFM 240 (478)
Q Consensus 164 ~~~~~g~~~ll~g~~~~y~~~-gs~~~~~l~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~ 240 (478)
+++.+++.+++.|+.++|..+ ||++++++.+...+. .++....++..++++|+++|.|++|||.|+||+||+||+|+
T Consensus 171 llg~~ss~~lL~GisllYg~tggs~~l~~i~~~~~~~~~~~~~~~~~~l~lil~G~~fK~a~~PFH~WlPDvY~gAPtpv 250 (498)
T CHL00049 171 LMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPV 250 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH
T ss_conf 99988899999999999999368000999999987534444079999999999999998622532322355744797899
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH--
Q ss_conf 33321000002321111124400011-222100000122210222200000124454435642111244211111121--
Q gi|254780867|r 241 TAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTG-- 317 (478)
Q Consensus 241 salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~-- 317 (478)
+|++|+++|+++++.++|++....+. .+.|..++.++|++|+++|++.|++|+|+||++|||||+|+||+++|+..+
T Consensus 251 sa~ls~~~K~a~~~~l~Rl~~~~~~~~~~~~~~~l~ila~lSmi~G~l~Al~Q~~iKRlLAYSSIsh~Gyillgl~~g~~ 330 (498)
T CHL00049 251 VAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDS 330 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999999999999999987340378999999999999999999999988643077767868776899999996645
Q ss_pred HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 57788886430023201001100002678740876455021046652321147899998653036650000675999999
Q gi|254780867|r 318 MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLI 397 (478)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~ 397 (478)
+.+..+.++|.++|+++|.++|.+++.+++++| ++|+++++|+.|++|.++.++.++.+|++|+||++||+||++++.
T Consensus 331 ~~g~~~~~~yl~~y~~~~~~~F~~i~~~~~~~g--~~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if~ 408 (498)
T CHL00049 331 NDGYASMITYMLFYIFMNLGTFACIILFGLRTG--TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFW 408 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 889999999999999999999999999998317--204998771876469999999999999847201105999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9996284999999999999999999999999964998778655673--------32189999999999999997676589
Q gi|254780867|r 398 SAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAK--------EMRLFIFGSILFVTGYFLIENILNSS 469 (478)
Q Consensus 398 ~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (478)
+.++++.++++++.+++|+++.+||+|+++.+|++||+|+....++ ..+..+...+..|+...+.|++.+++
T Consensus 409 ~~~~~g~~~l~~i~~l~Svis~~YYlrii~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~gi~~~p 488 (498)
T CHL00049 409 CGWQAGLYFLVSIGLLTSVVSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPWSLRSNNSIELSMIVCVIASTIPGISMNP 488 (498)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf 99986969999999999999999999999999328997667543457887400255564999999999999998825168
Q ss_pred HHHHHHH
Q ss_conf 9999875
Q gi|254780867|r 470 IMKIVMS 476 (478)
Q Consensus 470 ~~~~~~~ 476 (478)
+.+.+++
T Consensus 489 i~~~a~~ 495 (498)
T CHL00049 489 IIAIAQD 495 (498)
T ss_pred HHHHHHH
T ss_conf 9999987
No 4
>TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase, chain L; InterPro: IPR003945 NADH-plastoquinone oxidoreductase chain 5 is part of the NADH-ubiquinone oxidoreductase (complex I), which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane : NADH + ubiquinone = NAD(+) + ubiquinol ; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=624.44 Aligned_cols=447 Identities=20% Similarity=0.307 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHH--HHHHHHCCCC---------------HHHHHHHHHHHHHH
Q ss_conf 9999999999999864023015899999999999-9999--9999713221---------------00316764100799
Q gi|254780867|r 16 EIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLL-SIAL--FFLLIMPYEG---------------IGLGGAYISDRFSY 77 (478)
Q Consensus 16 ~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l-~i~l--~~~~~~~~~~---------------~~~~~~~~~D~~s~ 77 (478)
.++|+++++..-+.+...+++....++...+..- ..+. ......+.++ .+.+-.+.+|++|.
T Consensus 7 v~lPLiGfl~aglfg~~~~~~~~~~~~~~~~~~S~~l~~~~f~~~~~~~~~~~~~~~Lf~Wi~~g~l~v~~~~~~D~Ls~ 86 (691)
T TIGR01974 7 VFLPLIGFLIAGLFGRRIGKKASGIIGIGLVGVSAALSAYVFVDFLLNGEGEAFTQSLFPWISVGGLQVNFGLRVDQLSL 86 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCEEEEEEEEHHHHH
T ss_conf 99999999999987556765336899999999999999999998623788734888612224416710433456400688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999999999632100224206679999999999873146102212457778877776653200013445
Q gi|254780867|r 78 FIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIE 157 (478)
Q Consensus 78 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~ 157 (478)
.|-.++...+.++-+|+..|+++++.+ .||++++.++..+|+.+|.|||++.+|++||.+++|||+||++|.+++.+..
T Consensus 87 ~Ml~vvTgVs~LvHiYS~gYM~~D~g~-~RFFaYLsLF~fsML~LV~aDNfl~LF~GWEGVGLcSYLLIGFwy~k~sA~~ 165 (691)
T TIGR01974 87 TMLIVVTGVSLLVHIYSIGYMAHDEGR-SRFFAYLSLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANN 165 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 999999999889876400321478888-6047788899999999998756898888678988997874111246742541
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC------------CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55554014620467998898853001000001222211101343------------100001222211234444432110
Q gi|254780867|r 158 AALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR------------SFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 158 aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~------------~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
||+|.|++||+||..+++|+.++|...||+|++++....++... ...+...+.++++|.+-|+||+|+
T Consensus 166 AA~KAFvvNRVGD~g~~lGif~~f~~fGtl~f~~vf~~~~~~~~~G~~~~~~~g~~~~~l~~i~llLf~GAmGKSAQlpL 245 (691)
T TIGR01974 166 AAIKAFVVNRVGDFGLLLGIFLIFAYFGTLNFQEVFALAQNLDLEGATTIEFLGAEFSALTLICLLLFIGAMGKSAQLPL 245 (691)
T ss_pred CCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02114211037889999999999998776207899988864221157899873132218999999999735577520010
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEEC-CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012101221001233332100000-232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKF-ATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~-~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
|+|||||||+ ||||||+.|+.+++ ||+|.+.|..+++ +..|....++.++|.+|+++++..|+.|+|+||++||||+
T Consensus 246 HtWLpDAMeG-PTPVSALIHAATMVTAGVyLvaR~spLF-~l~p~al~~v~iiGA~TalFaA~~alvQ~DIKRilAYST~ 323 (691)
T TIGR01974 246 HTWLPDAMEG-PTPVSALIHAATMVTAGVYLVARTSPLF-ELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTC 323 (691)
T ss_pred HCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0246346798-7820177764477678899999734034-3466788857899999999999999987216674476411
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC--
Q ss_conf 124421111112157788886430023201001100002678740876455021046652321147899998653036--
Q gi|254780867|r 305 GHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG-- 382 (478)
Q Consensus 305 ~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G-- 382 (478)
||+|||.+|+|.++.|+..+++|+.+|++.|+.||+.+|++.+-.. ++|||+|||||+|++|++...+.||.+|++|
T Consensus 324 SQLGYMF~A~GvgP~AY~aAiFHL~THAFFKALLFLgaGsVIhAmh-hEqdirkMGgL~K~~P~Ty~~f~iG~lAL~Gli 402 (691)
T TIGR01974 324 SQLGYMFLALGVGPIAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH-HEQDIRKMGGLRKKLPVTYITFLIGSLALIGLI 402 (691)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1888999983576678999999999999999889986567876423-760023513201323899999999999999972
Q ss_pred CC----HHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--------------
Q ss_conf 65----0000675999999999628-----499999999999999999999999996499877865--------------
Q gi|254780867|r 383 IP----PFAGFFGKYFLLISAVKRE-----FYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV-------------- 439 (478)
Q Consensus 383 lP----p~~GF~sK~~i~~~~~~~~-----~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~-------------- 439 (478)
+| +|+||+||+.|+++++.++ ...+-.+.++++.+|++|.+|++...|.||++.+.+
T Consensus 403 ~Pg~~l~faGFfSKD~Ile~A~~~GG~~~~~~~~~~~gl~~A~~TafYsfRl~f~~FhG~~~~~~~~~~~~d~hg~e~~G 482 (691)
T TIGR01974 403 FPGTVLGFAGFFSKDLILEAAFASGGHSATGSFLFVAGLIGAFLTAFYSFRLIFLVFHGKERWEADSEHHSDKHGEEDHG 482 (691)
T ss_pred HCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC
T ss_conf 22144431554431489999985368427889999999999999999999988876367312245678889888755688
Q ss_pred ----CCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----5673-32189999999999999997676
Q gi|254780867|r 440 ----VVAK-EMRLFIFGSILFVTGYFLIENIL 466 (478)
Q Consensus 440 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
+.+. ++..+..|++++.++..+.....
T Consensus 483 ~g~~~H~HE~~~~m~~PL~~L~~gs~~~G~~~ 514 (691)
T TIGR01974 483 LGKAHHPHESPLVMLLPLIVLAVGSVFAGFLI 514 (691)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98888889873145888999999999989999
No 5
>PRK12667 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=616.15 Aligned_cols=466 Identities=25% Similarity=0.366 Sum_probs=383.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHH-HHHHHHHHH--HHHHHCCC---------CHHHHHHHHHHHH
Q ss_conf 299999999999999999998640230158999-9999-999999999--99971322---------1003167641007
Q gi|254780867|r 9 DLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHL-VVFP-VCLLSIALF--FLLIMPYE---------GIGLGGAYISDRF 75 (478)
Q Consensus 9 ~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~-~~~~-~~~l~i~l~--~~~~~~~~---------~~~~~~~~~~D~~ 75 (478)
|+..+.|++.+.+..+..++.....++++..+. .... ...+..... .......+ ...++..+.+|.+
T Consensus 4 ~~l~l~P~l~vl~~~~~~ll~~l~~~~~~~~~~~a~~~~~l~~~~s~~~~~~~~~~~~~~~~~~g~w~~~~gi~~~vD~l 83 (517)
T PRK12667 4 DVVGLTPLLLVLFAFLLPLLSIIIRGNRKIIQIYALLGTLLALISSILLFIQVYNSGKPIVYLFGGWPAPFGIVYEVDLL 83 (517)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEHHH
T ss_conf 38999999999999999999998558701899999999999999999999998369972898721677776845654173
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999999996321002242066799999999998731461022124577788777766532000134
Q gi|254780867|r 76 SYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFS 155 (478)
Q Consensus 76 s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~ 155 (478)
+..+..+..+.+..+.+++.++++++++ .++||.+++++..|+++++.|+|++++|++||++++++|.||++|++++++
T Consensus 84 s~~~~ll~~~v~~l~~lys~~y~~~~~~-~~~f~~l~ll~~~g~~g~~~s~dl~~~fvf~El~~i~sy~Li~~~~~~~~~ 162 (517)
T PRK12667 84 GALIGLLTALLMFLILIYSYWYLEHEDG-NEWYYTLYLGLEAGMLGVLLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDA 162 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 6999999999999999999998548986-417999999999999999997459999999999999999999882998999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC----------CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 455555401462046799889885300100000122221110134----------3100001222211234444432110
Q gi|254780867|r 156 IEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH----------RSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 156 ~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~----------~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
.||++||++++.+|+.+++.|+.++|..+||+|+.|+.....+.. ..........++++|+++|+|++||
T Consensus 163 ~~Aa~ky~i~~~~gs~~~L~gi~~ly~~~Gs~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ligf~~K~~l~Pf 242 (517)
T PRK12667 163 VEAAIKYALIGAVGTTMYFLALVILYGTYGTLNMADLSLKIHGLSGAGETTGVGNVPWASGLALALALWAFTIKAAIFPN 242 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999997785199999997530345666642006899999999999999998560632
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-------CCCCEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012101221001233332100000232111112440001122-------210000012221022220000012445443
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS-------GLLPIFMCVSIGSMVLGSVVAIRQKDLKRL 298 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~-------~~~~~l~~~g~~t~i~g~~~al~q~d~Krl 298 (478)
|.|+||+|++||+|+|+++|++.+|+|.|.++|+.....+... .+..++.++|++|+++|++.|++|+|+||+
T Consensus 243 H~WLPday~~APt~vSalls~~~~k~g~y~liR~~~~~~~~~~~~~~~~~~~~~~l~~lg~~s~i~g~~~Al~Q~dlKrl 322 (517)
T PRK12667 243 HFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGSSPSLADARAILLFIIVILGAVSAIIGALMMVGQRDVKRL 322 (517)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_conf 46652563239837769988999999999999999997234421155799999999999999999999999984407799
Q ss_pred CCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 56421112442111111215-77888864300232010011000026787408764550210466523211478999986
Q gi|254780867|r 299 MAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFL 377 (478)
Q Consensus 299 lAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~ 377 (478)
+|||||+|+||+++|++.++ .+..++++|+++|++.|.++|+++|.+++++| +||++|+||+.|++|.++.++.++.
T Consensus 323 LAYSsIs~~G~i~lgi~~~~~~g~~~al~~~i~h~l~k~~LFl~~g~i~~~~g--t~~i~~l~GL~~~~P~~a~~~~i~~ 400 (517)
T PRK12667 323 LAYSTISHIGYIFMGIGIGTQLGLQAALFHIINHAIAKALLFLASGVFIHAAG--TRDIDELAGLGRTMPIASFALLIGT 400 (517)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99842878999999998643999999999999999999999999999999808--8507986568888299999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHH
Q ss_conf 530366500006759999999996284999999999999999999999999964998778655673---32189999999
Q gi|254780867|r 378 FSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAK---EMRLFIFGSIL 454 (478)
Q Consensus 378 lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~---~~~~~~~~~~~ 454 (478)
+|++|+||++||+||+++++++++++.++.+.+.+++++++++||+|+++.+|+|+|+++.++.++ .+...+.....
T Consensus 401 lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~l~s~it~~y~lr~~~~~f~g~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (517)
T PRK12667 401 LSLVGIPPFNGFFSKLLLFNALLESGFYLPAIVILISSAISLVGYMRAWYLIIFGKPRSGEGKRVKESPSISLPILILAL 480 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99998878756999999999999728999999999999999999999999982699986444567886447999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHC
Q ss_conf 99999999767658-999998751
Q gi|254780867|r 455 FVTGYFLIENILNS-SIMKIVMSL 477 (478)
Q Consensus 455 ~~~~~~~~~~~~~~-~~~~~~~~l 477 (478)
.++.++++|+++.+ .++++++++
T Consensus 481 ~~v~~G~~p~~i~~~~~~~aa~~l 504 (517)
T PRK12667 481 IVLILGLFAPPIVEQLIQPIVEQI 504 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999715999999999999987
No 6
>PRK07691 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=612.73 Aligned_cols=466 Identities=20% Similarity=0.383 Sum_probs=387.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------HHHHHHHHHHHHH
Q ss_conf 862999999999999999999986402301589999999999999999999713221----------0031676410079
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG----------IGLGGAYISDRFS 76 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~----------~~~~~~~~~D~~s 76 (478)
|+++ +++|.+++.++++.....++..+..+...... ....+............++ ..++..+..|.++
T Consensus 3 m~~l-l~l~i~iPl~~a~~~~~l~~~~~~~r~i~~~~-~~~~l~~~~~l~~~~~~~g~~~~~~~~w~~~~gi~~~~D~ls 80 (498)
T PRK07691 3 MNNL-VILPLLIPVITAILLVFLGKRPIIQRYVALIG-SLLTLVAAIILLANVYKHGIITVELGSWKAPFGIVFVADIFA 80 (498)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHH
T ss_conf 7799-99999999999999999707613899999999-999999999999998269817998525677746055540766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999999999999999963210022420667999999999987314610221245777887777665320001344
Q gi|254780867|r 77 YFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSI 156 (478)
Q Consensus 77 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~ 156 (478)
..+..+..+.+....+++..+.++++++ ++||.++++...|+++++.|+|++++|++||++++++|.||++|+++ ++.
T Consensus 81 ~~~~ll~~~v~~l~~lys~~~~~~~~~~-~~f~~l~ll~~~g~~g~~~s~dl~~lfvf~Ei~~i~sy~Li~~~~~~-~~~ 158 (498)
T PRK07691 81 ALLVLTSIIITAIVILYSFQTIGIERER-YYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLLVIGGTK-IQL 158 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHH
T ss_conf 8999999999999999998982567332-18999999999999999999899999999999999999999984977-999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 555554014620467998898853001000001222211101343--100001222211234444432110001210122
Q gi|254780867|r 157 EAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR--SFVLIVGVVLILVGLFFKMALVPFHMWIPDVYE 234 (478)
Q Consensus 157 ~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~ 234 (478)
+|++||++++.+|+.++++|+.++|..+||+|+.|+.....+.+. +........+++.|+++|+|+||||.|+||+|+
T Consensus 159 ~aa~ky~i~~~~gs~~~L~gi~~ly~~tGtl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~K~a~~PfH~WlPday~ 238 (498)
T PRK07691 159 RETIKYVLINVVSSSFFVVGVAILYSVVGTLNMADISVKIAELGAHQTGLINVVAILFLFVFALKAGLFPLYFWLPGSYY 238 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC
T ss_conf 99999999999999999999999999977876999999997535554279999999999999998562546011544456
Q ss_pred HHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1001233332100000232111112440001122-210000012221022220000012445443564211124421111
Q gi|254780867|r 235 GSPMFMTAFLATIPKFATTMALCRITSVFWPMLS-GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG 313 (478)
Q Consensus 235 ~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~-~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~ 313 (478)
++|+|+++++|++++|+|+|+++|+.....+... .+..++.++|++|+++|++.|++|+|+||++|||||+|+||+++|
T Consensus 239 ~ap~~~s~lls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~l~~l~~~t~~~g~~~Al~Q~d~KrlLAYSsisq~G~i~~g 318 (498)
T PRK07691 239 APPAAIIALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILFLALLTIIFGVIGAVAYADIKKIIIYNIMIAVGVILVG 318 (498)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89947999999999999999999999985533389999999999999999999999987039999999999999999999
Q ss_pred CCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 11215-77888864300232010011000026787408764550210466523211478999986530366500006759
Q gi|254780867|r 314 FSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGK 392 (478)
Q Consensus 314 l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK 392 (478)
++.++ .+..++++|+++|++.|.++|+++|.+++++| +||++|+||+.|++|.++.++.++.+|++|+||++||+||
T Consensus 319 i~~~~~~~~~gal~~l~~h~~~k~~lFl~~g~i~~~~g--~~~i~~lgGL~~~~P~~a~~f~i~~lsl~GlPp~~GF~sK 396 (498)
T PRK07691 319 VAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITG--TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGK 396 (498)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99752999999999999999999999999999999739--8659998198988499999999999997528520418899
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999996284999999999999999999999999964998778655673321---89999999999999997676589
Q gi|254780867|r 393 YFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMR---LFIFGSILFVTGYFLIENILNSS 469 (478)
Q Consensus 393 ~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 469 (478)
|++++++++++.++.+.+.+++++++++||+|+++.+|+|||+++.++.+++.+ ..+.+....++.++++|+++.+.
T Consensus 397 ~~i~~~a~~~~~~~~~~~~~~~s~~~~~y~~r~~~~~f~g~~~~~~~~~~~~~~~~~~p~~~l~~~~i~~Gi~p~~~~~~ 476 (498)
T PRK07691 397 FFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLQGFWGEPKGYDLNNKVPVKKLLTPAIVLVVITILYGLGAEYLYPY 476 (498)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999847199999999999999999999999983289987555667883568999999999999999658999999
Q ss_pred HHHHHHHCC
Q ss_conf 999987519
Q gi|254780867|r 470 IMKIVMSLF 478 (478)
Q Consensus 470 ~~~~~~~l~ 478 (478)
.+++++++.
T Consensus 477 ~~~aa~~ll 485 (498)
T PRK07691 477 VKQAAETLY 485 (498)
T ss_pred HHHHHHHHC
T ss_conf 999999862
No 7
>PRK08377 NADH dehydrogenase subunit N; Validated
Probab=100.00 E-value=0 Score=610.46 Aligned_cols=455 Identities=25% Similarity=0.387 Sum_probs=376.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH--HCCCC---------HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999864023015899999999999999999997--13221---------003167641007999999999
Q gi|254780867|r 16 EIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI--MPYEG---------IGLGGAYISDRFSYFIKAILL 84 (478)
Q Consensus 16 ~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~--~~~~~---------~~~~~~~~~D~~s~~~~~l~~ 84 (478)
..+|.++++......+..++...............+....... ...++ ..++..+..|.++..+..+..
T Consensus 9 I~lPli~A~l~~ll~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~W~~~~gi~~~~d~ls~~~~ll~~ 88 (493)
T PRK08377 9 IALPLISAFFVPVLKGIGKSLIMPYLVLITLLQTGIAGWVFYEVYTTGKPIIIMAGGWKPPVGINLYIGHFAALFVLIIA 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 99999999999998633068999999999999999999999998158981799831757863707788855489999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf 99999999999996321002242066799999999998731461022124577788777766532000134455555401
Q gi|254780867|r 85 MSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFV 164 (478)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~ 164 (478)
..+....+++.++++ +++.++|+.++++...|+++++.|+|++++|+|||++++++|.||+++++ +++.||++||++
T Consensus 89 ~v~~~~~~ys~~~~~--~~~~~~~~~l~ll~~~g~~g~~~s~Dl~~lfvf~E~~~i~sy~Li~~~~~-~~~~~Aa~ky~i 165 (493)
T PRK08377 89 VVSFFTALFSFRAVK--VEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKT-GEAAEASMKYIV 165 (493)
T ss_pred HHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH
T ss_conf 999999999998843--68624099999999999999999816999999999999999999998798-899999999999
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 46204679988988530010000012222111013431000012222112344444321100012101221001233332
Q gi|254780867|r 165 LGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244 (478)
Q Consensus 165 ~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sall 244 (478)
++.+|+.++++|+.++|..+||+|++++.+...+. ++.....+..+++.|+++|+++||||.|+||+|++||+|+|+++
T Consensus 166 ~~~~gs~~~L~gi~lly~~~Gt~~~~~l~~~~~~~-~~~~~~~~~~l~~~gf~~K~~~fPfH~WlPday~~apt~vsall 244 (493)
T PRK08377 166 LGGIGSSFFLIGVALIYGATGTLNMAHLAQLAAAI-DPTVAQVGLALIIFGLAVEAELFPLNAWAPDAYQAAPHPITVMF 244 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHH
T ss_conf 99999999999999999980897599999986245-73899999999999999885706107774454446898607888
Q ss_pred CCCEECCCCCCCCCCCCCCCCCC--CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHH
Q ss_conf 10000023211111244000112--221000001222102222000001244544356421112442111111215-778
Q gi|254780867|r 245 ATIPKFATTMALCRITSVFWPML--SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGI 321 (478)
Q Consensus 245 s~~~~~~~~~~l~r~~~~~~~~~--~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~ 321 (478)
+++++|+|+|.+.|+.+.+.+.. +.....+.++|.+|+++|++.|++|+|+||++|||||+|+||+++|++.++ .|.
T Consensus 245 s~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~l~~l~~~t~~~G~~~Al~Q~dlKrllAYSsIsq~G~i~lgi~~~~~~g~ 324 (493)
T PRK08377 245 SAFVVKAGLYAMARILYLLQKVNGWSSVLKLLIIMATLTVVFAELSALRQKDVKRMIAYSSIGQVGLIALAFSLGTQAGV 324 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 89999999999999999732301269999999999999999999999985055099999899999999999995779899
Q ss_pred HHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88864300232010011000026787408764550210466523211478999986530366500006759999999996
Q gi|254780867|r 322 VAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVK 401 (478)
Q Consensus 322 ~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~ 401 (478)
.++++|+++|++.|.++|.++|.+++++| +||++|++|+.|++|.++.++.++.+|++|+||++||+||+++++++++
T Consensus 325 ~~a~~~l~~h~~~k~~lFl~~g~i~~~~g--~~~l~~l~GL~~~~P~~a~~~~i~~lsl~GiPp~~GF~~K~~i~~aa~~ 402 (493)
T PRK08377 325 DAGVFHMLNHAIVKAMMFLAVGYVGITLG--GTEIENFQGLGKRMPLTALALTIGAVATVGVPLFNVFWSKFRIILATLQ 402 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999838--8759996597866289999999999999988776469999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 28499999999999999999999999996499877865567332189999999999999997676589999987519
Q gi|254780867|r 402 REFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 402 ~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
++.+|++.+.+++|+++++||+|+++.+|+++++|+.++. .....+......++.++++|+++.+..+++++++.
T Consensus 403 ~~~~~~~~~~~i~svis~~Y~lr~i~~~ff~~~~~~~~~~--~~~~~~~~l~~~~i~lGi~P~p~~~~~~~aa~~l~ 477 (493)
T PRK08377 403 AGYTWPAALVLFASVVEAVYYFRLIHTMWFEGEGERIKEG--WIGVFLLLLAALIVVIGVYPTPVWEIVKKAGSDIF 477 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 3969999999999999999999999999428887555400--28999999999999999637989999999999870
No 8
>PRK08668 NADH dehydrogenase subunit M; Validated
Probab=100.00 E-value=0 Score=613.60 Aligned_cols=406 Identities=23% Similarity=0.370 Sum_probs=351.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+++..+..|.++..+..++...+..+.+++.+|+++++++ ++|+.+++++..|+++++.|+|++++|++||++++++|.
T Consensus 62 ~~~i~f~lD~ls~~f~lli~~v~~lv~lys~~Ym~~~~~~-~~f~~~lll~~~~mlgvv~s~dl~~lfvfwEl~~l~syl 140 (616)
T PRK08668 62 GFELQLKLTHLGWYFAIISLLVGLSVSFFMVEWLEKQKNP-AAFNMFALMSLTGVLGVFFANDLITLFIFWEIAVLGSFM 140 (616)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7127886456679999999999999999999984279981-099999999999999999993899999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
+|.+++ +++.+|+.||++++++|+.+++.|+.++|..+||+|++++.+...+.+..........+++.+...|+|++|
T Consensus 141 LI~~~~--~~a~~Aa~kyfi~~~vG~~~~L~gi~lly~~~Gt~~~~~i~~~l~~~~~~~~~~~~~l~l~~~~~~Ksa~fP 218 (616)
T PRK08668 141 IVPMGK--KESRKASLKYFVLSAIGAYAMLFAIFLIYAKYGTFSFDEISQALLNDASLGFKLIVVLFLSAAGIAKSGIFP 218 (616)
T ss_pred HHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 777298--389999999999999999999999999999978634999999985175417999999999999999846287
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-----------CCCCCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 000121012210012333321000002321111124400011-----------222100000122210222200000124
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-----------LSGLLPIFMCVSIGSMVLGSVVAIRQK 293 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-----------~~~~~~~l~~~g~~t~i~g~~~al~q~ 293 (478)
||.|+||||++||+|+|+++|++++|+|+|+++|+...+... .+.+..++.++|++|+++|++.|++|+
T Consensus 219 fH~WLPdA~~~aP~~vSallsg~mvk~Gvy~lir~~~l~~~~~~~~~~~~~~~~~~~~~ii~~lg~iT~i~gal~Al~Q~ 298 (616)
T PRK08668 219 LHTWLPDAYGEAPQSFTAVFSGQLSKMGVYGFLLVYAVIPTGKLFSEFGTYHGVPLFNYIIIWLGNISIIVGTLMAILQE 298 (616)
T ss_pred CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76876252067978999999999999999999999999721276665422003257999999999999999999999860
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHH
Q ss_conf 4544356421112442111111215-778888643002320100110000267874087645502104665232114789
Q gi|254780867|r 294 DLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCA 372 (478)
Q Consensus 294 d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~ 372 (478)
|+||++|||||+|+|||++|++.++ .|+.++++|+++|++.|.++|+++|.+.+++| +||++|+||+.|+||.++.+
T Consensus 299 DiKrlLAYSSisq~Gyillgig~g~~~g~~galfhli~Ha~~Ka~LFL~aG~v~~~~g--t~di~~lgGL~k~mP~t~~~ 376 (616)
T PRK08668 299 DMKKLIAYSSIANGGYILIGLGTGDSLGFAGGLFHVFNHALAKGLFFLSFAAVIYRTG--TTKIKEMGGLIEKMPVTFAM 376 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCCCCCCHHHHHH
T ss_conf 1899999999999999999998665999999999999999999999999999999738--66399858912005899999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH---HHH
Q ss_conf 99986530366500006759999999996284999999999999999999999999964998778655673321---899
Q gi|254780867|r 373 LTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMR---LFI 449 (478)
Q Consensus 373 ~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~---~~~ 449 (478)
+.++.+|++|+||++||+|||++++++.+++.++.+.+..+++++++.|+.|.+...|+||++++.++.+|.+. +.+
T Consensus 377 ~~i~~lsl~GiPp~~GF~SK~~i~~a~~~~~~~~~~~~~~~~~~~t~~y~~r~~~~~F~G~~~~~~~~~~E~p~~M~ipm 456 (616)
T PRK08668 377 YLVAIISLAGIPPMSGFASKWLIFEALISKGMFITAFMVFFGSIGSFLYVFRPLAGVFLGQLPSKHEDVKEAPLPMLIPM 456 (616)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999998736030489999999999998587699999999999999999999999957999743488999967688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999997676589999987
Q gi|254780867|r 450 FGSILFVTGYFLIENILNSSIMKIVM 475 (478)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (478)
....+.++.++++|++..+.+.++..
T Consensus 457 ~iLa~~~v~~G~~P~~~~~~~~~~~~ 482 (616)
T PRK08668 457 LILVLLTVVFGVAPGPVLQEINKIFG 482 (616)
T ss_pred HHHHHHHHHHEECCHHHHHHHHHHHH
T ss_conf 99999999821077166899999874
No 9
>PRK12662 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=609.30 Aligned_cols=464 Identities=24% Similarity=0.379 Sum_probs=376.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHHHHHCCC----------CHHHHHHHHHHHHH
Q ss_conf 62999999999999999999986402301589999-99999999999999971322----------10031676410079
Q gi|254780867|r 8 NDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLV-VFPVCLLSIALFFLLIMPYE----------GIGLGGAYISDRFS 76 (478)
Q Consensus 8 ~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~-~~~~~~l~i~l~~~~~~~~~----------~~~~~~~~~~D~~s 76 (478)
++...++|.+++.++++....... ++..+... ......+............. ...++..+.+|.++
T Consensus 2 ~~~lp~L~i~iPli~a~l~~l~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~w~~~~gi~l~vD~ls 78 (491)
T PRK12662 2 KSSLPILQVIIPLLSAVVCALLKN---HKLVKIISFIVVTVSFFIALVLFVQVYSGGVIKYSLGGWAPPYGIELRVDILN 78 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECHHH
T ss_conf 213899999999999999999767---30799999999999999999999998489956986204677768256550766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 999999999999999999999632100--224206679999999999873146102212457778877776653200013
Q gi|254780867|r 77 YFIKAILLMSSIIIFIKMFSCIYVKPF--SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVF 154 (478)
Q Consensus 77 ~~~~~l~~~~~l~~~~~~~~~~~~~~~--~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~ 154 (478)
..+..++...+....+++..+.+++.. +..+||.+++++..|+++++.|+|++++|++||++++++|.||+++++ ++
T Consensus 79 ~~~~ll~~~i~~~~~lys~~~~~~~~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~~~~-~~ 157 (491)
T PRK12662 79 ATMLVLVNFIAVMSVLYGIYPNEKEISVNKIPSFYSVFLLCLSGLLGILVSNDVFNIYVFLEISSISSYVLVAMGKD-KK 157 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HH
T ss_conf 89999999999999999846652575400588999999999999999999848999999999999999999997798-89
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 44555554014620467998898853001000001222211101343100001222211234444432110001210122
Q gi|254780867|r 155 SIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYE 234 (478)
Q Consensus 155 ~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~ 234 (478)
+.||++||++++.+|+.++++|+.++|..+||+|++|+.....+.+.+.....+..+++.|+++|+|++|||.|+||+|+
T Consensus 158 ~~~aa~ky~i~~~~gs~~~L~gi~~ly~~~Gt~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~K~~~~PfH~WlPda~~ 237 (491)
T PRK12662 158 ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGTLFIMVGLFIKAALFPFHKWLIQAYS 237 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
T ss_conf 99999999999999999999999999999666549999999774554439999999999999999807113456057777
Q ss_pred HHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-----CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012333321000002321111124400011-----2221000001222102222000001244544356421112442
Q gi|254780867|r 235 GSPMFMTAFLATIPKFATTMALCRITSVFWPM-----LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGY 309 (478)
Q Consensus 235 ~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-----~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~ 309 (478)
+||+|+|+++|++++|+|+|+++|+.....+. .+.+..++.++|++|+++|++.|++|+|+||++|||||+|+||
T Consensus 238 ~ap~~~salls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~diKrllAYSsIsq~G~ 317 (491)
T PRK12662 238 EAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNIVFMILAALAIVFGSILAILSKDIKRIFAYSSIAHIGY 317 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 79937889999999999999999999985420578866789999999999999999999998556529999999999999
Q ss_pred CCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 111111215-7788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 310 ALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 310 i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
+++|++.++ .|..++++|+++|++.|.++|.++|.+++++| +||++++||+.|++|.++.++.++.+|++|+||++|
T Consensus 318 i~~gi~~~~~~g~~ga~~~~~~h~~~k~~LFl~~G~i~~~~g--t~~i~~l~GL~~~~P~~a~~~~i~~lsl~GlPp~~G 395 (491)
T PRK12662 318 IIFAVSLNTYYGLAAAVAYIINHSLVKSALFMVAGSISYKFG--NTKLEDCSNLWKSMPKITLAFVLLSLSLIGMPLTSG 395 (491)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999757688999999999999999999999999998649--870898658186749999999999999998768757
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 675999999999628499999999999999999999999996499877865567-----332189999999999999997
Q gi|254780867|r 389 FFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA-----KEMRLFIFGSILFVTGYFLIE 463 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 463 (478)
|+|||+++++.++++.++...+.++++++++.|++|.++.+|+++++++.++.+ ..+...+......++.++++|
T Consensus 396 F~sK~~i~~~~~~~~~~~~~~~~~~~s~lt~~Y~lr~~~~~f~~~~~~~~~~~~~~~~p~~m~~~~~ila~~~i~lGl~P 475 (491)
T PRK12662 396 FISKWYILDAIIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESSDVSVVAMTLFKTPNVMVLCIWIMAILSIIVGIYP 475 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999987689999999999999999999999999839997433567777798999999999999999999735
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 67658999998751
Q gi|254780867|r 464 NILNSSIMKIVMSL 477 (478)
Q Consensus 464 ~~~~~~~~~~~~~l 477 (478)
.++.+..+++++.+
T Consensus 476 ~pl~~i~~~~a~~l 489 (491)
T PRK12662 476 IPLTLISNKIAFLL 489 (491)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 98999999999997
No 10
>PRK12663 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=602.87 Aligned_cols=462 Identities=23% Similarity=0.389 Sum_probs=385.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHCCC--------CHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999864023015899999999-9999999999971322--------1003167641007999999
Q gi|254780867|r 11 RLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPV-CLLSIALFFLLIMPYE--------GIGLGGAYISDRFSYFIKA 81 (478)
Q Consensus 11 ~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~-~~l~i~l~~~~~~~~~--------~~~~~~~~~~D~~s~~~~~ 81 (478)
.+.+|++++.++++..+..+...+.++......... ......+......+++ ...++..+..|.++..+..
T Consensus 4 Ll~l~illPl~~a~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~w~~~~gi~~~vD~ls~~~~l 83 (497)
T PRK12663 4 LLILPMLLPLLCALILVFLRNNDRLQRYLALGTMTALTIISLALLIYVQRHGPITLDFGGWLAPFGIQFTGDSLSALMVT 83 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECHHHHHHHH
T ss_conf 99999999999999999956845179999999999999999999999816994799842467776707786465599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99999999999999996321002242066799999999998731461022124577788777766532000134455555
Q gi|254780867|r 82 ILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALK 161 (478)
Q Consensus 82 l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~k 161 (478)
.....+.....++..+.++++++ ++||.++++...|+++++.++|++++|++||++++++|.||++++++ ++.||++|
T Consensus 84 l~~~v~~~~~~ys~~~~~~~~~~-~~f~~l~ll~~~g~~g~~~a~dl~~~fvf~E~~~i~sy~Li~~~~~~-~~~~Aa~k 161 (497)
T PRK12663 84 TASFVATAIMAYSFADIEKSGRR-YGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLLASFVLITLGQSR-EQLRGAIK 161 (497)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHH
T ss_conf 99999999999998986078216-49999999999999999998379999999999999999999968988-99999999
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 40146204679988988530010000012222111013431000012222112344444321100012101221001233
Q gi|254780867|r 162 YFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMT 241 (478)
Q Consensus 162 y~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~s 241 (478)
|++++.+|+.++++|+.++|..+||+|++++.....+..++........+++.|+++|+++|||| |+||+|+++|+++|
T Consensus 162 y~i~~~~gs~~~L~gi~~ly~~tGt~~~~~i~~~~~~~~~~~~~~~~~~l~l~gf~~K~~~~Pfh-WLPday~~ap~~vs 240 (497)
T PRK12663 162 YVVLNLIGSWLFLLGIGLLYKVFGTLNMAHIAMRLNEMGDNATLTTIALLFLLAFSMKAALFPFM-WLPAAYHTPNTEVA 240 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCHHH
T ss_conf 99999999999999999999984897699999998744663799999999999999986630102-28887568993186
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-H
Q ss_conf 3321000002321111124400011-2221000001222102222000001244544356421112442111111215-7
Q gi|254780867|r 242 AFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-L 319 (478)
Q Consensus 242 alls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~ 319 (478)
++++++++|+|.|+++|+.....+. ...+..++.++|++|+++|++.|++|+|+||++|||||+|+||+++|++.++ .
T Consensus 241 allsgv~~k~g~y~liR~~~~~~~~~~~~~~~~l~~l~~~t~i~g~~~Al~Q~d~KrlLAYSSIsq~G~il~gi~~~~~~ 320 (497)
T PRK12663 241 ALFAALLTKVGIYALIRFFTLLFDQERELLHPLIATMAAITMVIGAIGALAYKDIRRIAGYQVISSIGFILLGLGLGTPA 320 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988750324999999999999989999999999870577677112310378999999972377
Q ss_pred HHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78888643002320100110000267874087645502104665232114789999865303665000067599999999
Q gi|254780867|r 320 GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~ 399 (478)
++.++++|+++|++.|.++|+++|.+++++| +||++|+||+.|++|.++.++.++.+|++|+||++||+|||++++++
T Consensus 321 ~~~ga~~~~~~h~~~k~~LFl~~g~i~~~~g--t~~i~~l~GL~~~~P~~a~~~~i~~lsl~GlPp~~GF~sK~~i~~~~ 398 (497)
T PRK12663 321 GINGAIFYLVHDIVVKTLLFLIAGSLVYLTG--YRQLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGA 398 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 9999999999999999999999999999718--81089867768774999999999999985287525188899999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 962849999999999999999999999999649987786556----7332189999999999999997676589999987
Q gi|254780867|r 400 VKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVV----AKEMRLFIFGSILFVTGYFLIENILNSSIMKIVM 475 (478)
Q Consensus 400 ~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (478)
++++.++.+.+.+++++++++||+|+++.+|+++++++.+.. +..+...+.+....++.++++|+++.+..++.++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~y~~r~~~~~f~g~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~Gl~P~~~~~~~~~aa~ 478 (497)
T PRK12663 399 LDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKPDGEEVNFKKIPLYRKRILSILVVVVIAMGIAAEPLLNLTQDAAE 478 (497)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98186999999999999999999999999950899974445767798769999999999999999539999999999999
Q ss_pred HC
Q ss_conf 51
Q gi|254780867|r 476 SL 477 (478)
Q Consensus 476 ~l 477 (478)
++
T Consensus 479 ~L 480 (497)
T PRK12663 479 LL 480 (497)
T ss_pred HH
T ss_conf 87
No 11
>PRK08375 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=604.86 Aligned_cols=464 Identities=25% Similarity=0.375 Sum_probs=378.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHH
Q ss_conf 862999999999999999999986402301589999999999999999999713221--------003167641007999
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG--------IGLGGAYISDRFSYF 78 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~--------~~~~~~~~~D~~s~~ 78 (478)
|+++ +.+|..++.++++.....++...++............+...+......+... ..++..+..|+++..
T Consensus 2 m~~l-l~l~i~iPll~a~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gi~l~~D~ls~~ 80 (481)
T PRK08375 2 MSHL-LILLVAVPLLAAALAALLPRSRLRWAFALLVAALTFALSISLLPQVLSGGTIAYNVGGWPPGIGIELRADALSAL 80 (481)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHHHH
T ss_conf 6589-999999999999999995884368999999999999999999999808996598743256663538876375699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999999999999996321002242066799999999998731461022124577788777766532000134455
Q gi|254780867|r 79 IKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEA 158 (478)
Q Consensus 79 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~a 158 (478)
+..+....+..+..++.++.+ +++.++|+.+++++..++++++.|+|++++|++||++++++|.||+++++++++.||
T Consensus 81 ~~~l~~~~~~~~~~ys~~y~~--~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~~v~~E~~~i~s~~Li~~~~~~~~~~~a 158 (481)
T PRK08375 81 FLLVVSIVALAALVYAIGYMG--EHRQTRFYALFLLLLAGLLGAAITGDLFNLFVFLEISSLSSYALVALGGKEGRAGAA 158 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 999999999999999768706--764157999999999999999998279999999999999999999961997899999
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 55540146204679988988530010000012222111013431000012222112344444321100012101221001
Q gi|254780867|r 159 ALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPM 238 (478)
Q Consensus 159 a~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~ 238 (478)
++||++++.+|+.++++|+.++|..+||+|++++.+.....+++.....+..+++.|+++|+|++|||.|+||+|+++|+
T Consensus 159 a~ky~i~~~~g~~~ll~gi~lly~~~Gt~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WLPda~~~ap~ 238 (481)
T PRK08375 159 AYKYLILGTIGSTFLLAGVGLLYGVTGTLNMADLAGRLPPVGASRTVVAAFGFLVLGLALKAALFPLHTWLPDAYAAAPP 238 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
T ss_conf 99999999999999999999999880884199999987507664799999999999999997252232231564446675
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCC----CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2333321000002321111124400011----222100000122210222200000124454435642111244211111
Q gi|254780867|r 239 FMTAFLATIPKFATTMALCRITSVFWPM----LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGF 314 (478)
Q Consensus 239 ~~salls~~~~~~~~~~l~r~~~~~~~~----~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l 314 (478)
+++++++++++|+|.|+++|+.....+. ...+...+.++|++|+++|++.|++|+|+||++|||||+|+||+++|+
T Consensus 239 ~~s~lls~~~~k~g~y~l~r~~~~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~d~KrllAYSsis~~G~i~~gi 318 (481)
T PRK08375 239 VVTALLSGLVTKVAVYALIRIYFTVFGVDFTFALLLGWLLAVLALVSMLVGSFAALLQDDLKRVLAYSTVSQMGYILLGL 318 (481)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 07999999999999999999999965752544799999999999999999999999854630899999999999999999
Q ss_pred CCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 1215-778888643002320100110000267874087645502104665232114789999865303665000067599
Q gi|254780867|r 315 STGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKY 393 (478)
Q Consensus 315 ~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~ 393 (478)
+.++ .+..++++|+++|++.|.++|.++|.+++++| +||++|+||+.|++|.++.++.++.+|++|+||++||+||+
T Consensus 319 ~~~~~~~~~gal~~~i~h~~~k~~LFl~~g~l~~~~g--~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~ 396 (481)
T PRK08375 319 ALLTPLALAAGLLHLLAHALMKGALFLAAGAIEETTG--TRRLSDLAGLGRRMPLTAAAFAVASLSLIGVPPTVGFVSKW 396 (481)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 9678587998999999999999999999999985146--46099853868766999999999999984253103199999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999962849999999999999999999999999649987786556733---21899999999999999976765899
Q gi|254780867|r 394 FLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE---MRLFIFGSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
+++++.++++.++...+.+++++++++||+|+++.+|+|+|+++.++.++. +...+.+....++..+++|++..+..
T Consensus 397 ~i~~~~~~~~~~~~~~~~~~~s~lt~~y~lr~~~~~f~g~~~~~~~~~~~~~~~~~~~~~iL~~~~i~lGi~p~~~~~~~ 476 (481)
T PRK08375 397 YLLVGAVEAGAWPVLAVLLASSLLALLYFLRIWYYAFFGPPPAEREPGKEAPLTMLIPSLALALLSVLLGIFAGPLLQVA 476 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998667999999999999999999999999967999976678888999899999999999999998499999999
Q ss_pred HHHHH
Q ss_conf 99987
Q gi|254780867|r 471 MKIVM 475 (478)
Q Consensus 471 ~~~~~ 475 (478)
++.++
T Consensus 477 ~~a~e 481 (481)
T PRK08375 477 QAAAE 481 (481)
T ss_pred HHHHC
T ss_conf 98739
No 12
>TIGR01770 NDH_I_N proton-translocating NADH-quinone oxidoreductase, chain N; InterPro: IPR010096 This entry describes the 14th (based on Escherichia coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This entry does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This entry also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=607.26 Aligned_cols=456 Identities=43% Similarity=0.763 Sum_probs=396.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHH---HHHH-HHHH-HHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHHHH
Q ss_conf 9999999999999999998640230158---9999-9999-9999999999971322100-----316764100799999
Q gi|254780867|r 11 RLCIPEIIIAFGILFLLLMGVFSRRKNA---FHLV-VFPV-CLLSIALFFLLIMPYEGIG-----LGGAYISDRFSYFIK 80 (478)
Q Consensus 11 ~lllP~i~l~~~~l~~l~~~~~~~~~~~---~~~~-~~~~-~~l~i~l~~~~~~~~~~~~-----~~~~~~~D~~s~~~~ 80 (478)
..++||+.+..+++..++.+.+.+++++ .... .... .............+.+... +.+.+..|+++...+
T Consensus 2 ~~~lPE~~l~~~~~~ll~~~~f~~~~~~~~~~~l~~~~~~~v~~~~~~~L~l~~~~~~~~~~~~~f~~~f~~D~~~~~~k 81 (491)
T TIGR01770 2 LAILPEIILLLGILILLLFGLFYSRKKRYKFPLLLKNLLYIVLLSLLVILFLTLQYAAYLFIGFSFAGFFIVDNFALLIK 81 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 15538999999999999999882365554307999999999999999999998621431232001343366746899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999999999999999632100224206679999999999873146102212457778877776653200013445555
Q gi|254780867|r 81 AILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAAL 160 (478)
Q Consensus 81 ~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ 160 (478)
.+.++.+..+.....++.+.++.++.||+.+.++...|+..+++|+|++.+|+++|++|+|.|.|++..|++++|.|||+
T Consensus 82 ~~~ll~~~~~~~~~~~~~~~~~~~~~EF~~L~l~~~lG~~~~vS~~~Ll~~y~gLEl~SL~~Y~L~~~~r~s~~S~EAgl 161 (491)
T TIGR01770 82 LILLLSTLLLFLLALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAALKRKSEFSTEAGL 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999999987446775113204789999999999999999999999999999999999999863211121235668
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 540146204679988988530010000012222111013431--------000012222112344444321100012101
Q gi|254780867|r 161 KYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRS--------FVLIVGVVLILVGLFFKMALVPFHMWIPDV 232 (478)
Q Consensus 161 ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~--------~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a 232 (478)
||+++|.++|+++++|++++|+.|||+|++|+.+...+...+ .....|.+++++|+++|.+.+|||.|.||+
T Consensus 162 KYfiLGa~sS~llLfG~sliYg~tG~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~G~~f~~~gl~FKl~avPFH~W~PDV 241 (491)
T TIGR01770 162 KYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNLEKNISNILINSSLLLLGIVFILVGLLFKLSAVPFHMWVPDV 241 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999999999999999986767779999998521102343031048899999999999999999861333437864
Q ss_pred HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2210012333321000002321111124400011-222100000122210222200000124454435642111244211
Q gi|254780867|r 233 YEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYAL 311 (478)
Q Consensus 233 ~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~ 311 (478)
||+||+|+++++|.++|.+++++++|++...... .+.|+.++.++++.|+++|++.|+.|+|.||+||||||+|.||++
T Consensus 242 YeGaP~~vt~f~s~vpKIa~f~~~~rl~~~~~~~~~~~~~~~~~~~a~~Sm~~G~~~Al~Q~~~KRlLAYSSI~H~Gy~l 321 (491)
T TIGR01770 242 YEGAPTSVTAFFSIVPKIAIFAVLLRLFLYILFEFSAVWQIFLLIIAVLSMLIGNFGALAQKKVKRLLAYSSISHVGYIL 321 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 13654999999999999999999999998886533468999999999999999999997310403777886799999999
Q ss_pred CCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHH------HCCCC--CCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 1111215-77888864300232010011000026787------40876--455021046652321147899998653036
Q gi|254780867|r 312 IGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRR------KDGNN--IQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 312 ~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~------~~~~~--~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
+|+..++ .|.++.++|+..|+++..+.|.+...+++ +++.+ .++++|++|+.+++|..+..+.+..+|++|
T Consensus 322 ~~~~~~~~~g~~a~l~Y~~~Y~~~~~g~F~~l~~L~~~rnv~~~~~~~ry~~~~~~~~gL~~~~p~~A~~~~i~~FSlaG 401 (491)
T TIGR01770 322 IGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLLLLRSIRNVYKKKDEERYIEYISDLAGLAKTNPLLAILILIILFSLAG 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99997303148999999999999999999999998314442012776213332899998998829999999999999630
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCC--CCCCCCHHHHHHHHHHHH
Q ss_conf 6500006759999999996284999999999999999999999999964998---77865--567332189999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQS---TECVV--VVAKEMRLFIFGSILFVT 457 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 457 (478)
+||+.||+||++++.++.+++.+++++++++.|+++++||+|+++.+|++|| +++.. +.++..+..+....+..+
T Consensus 402 IPP~aGF~~K~~vf~~~~~~~~~~L~~~~v~~S~~~~fYYlR~~k~myf~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 481 (491)
T TIGR01770 402 IPPLAGFFGKFYVFFALLKSGLVLLAVIAVLISVISAFYYLRVVKVMYFDKPEVLERRIIIAPISKAQSLLLSITALFLV 481 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 23268999999999999967815579999999999999999999999807642120232145554256799999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999997676
Q gi|254780867|r 458 GYFLIENIL 466 (478)
Q Consensus 458 ~~~~~~~~~ 466 (478)
..++.|++.
T Consensus 482 ~~gl~P~~~ 490 (491)
T TIGR01770 482 FLGLFPSLI 490 (491)
T ss_pred HHHHHHHCC
T ss_conf 999710114
No 13
>PRK12645 monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=598.73 Aligned_cols=457 Identities=23% Similarity=0.293 Sum_probs=363.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH--HCC----------CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999864023015899999999999999999997--132----------2100316764100799999999
Q gi|254780867|r 16 EIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI--MPY----------EGIGLGGAYISDRFSYFIKAIL 83 (478)
Q Consensus 16 ~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~--~~~----------~~~~~~~~~~~D~~s~~~~~l~ 83 (478)
.+.+.++++..+...+..++.+..+.................. .++ +..+.+..+..|.+|..+..++
T Consensus 8 IllPfl~All~p~l~r~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~Wip~lgi~~~l~lD~LS~lf~llv 87 (800)
T PRK12645 8 ILLPFIFALIIPFLYRFVKRIHTGWFVLPVPVVLFIYFLTLIPTTMSGNTIMKTLNWIPSLGINFTLYLDGLSLLFALLI 87 (800)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 99999999999999863205899999999999999999998544058976999755656678558997507789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999999999632100224206679999999999873146102212457778877776653200013445555540
Q gi|254780867|r 84 LMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYF 163 (478)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~ 163 (478)
...+..+.+|+..|+.+++++.++||.+++++..+|++++.|+|++++|+|||++++++|.||++|++++++.++++||+
T Consensus 88 ~~ig~lv~iYs~~Ym~~~~~~~~~F~~~lllf~~aMlGlvla~dl~~lfvfwElt~l~Sy~LI~~~~~~~~~~~aA~k~l 167 (800)
T PRK12645 88 TGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSM 167 (800)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999995887167987511899999999999999999744999999999999999999830599889999999998
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 14620467998898853001000001222211101343100001222211234444432110001210122100123333
Q gi|254780867|r 164 VLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAF 243 (478)
Q Consensus 164 ~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sal 243 (478)
+++.+|+.+++.|+.++|..+||+|++++.+......++.....+..++++|+..|+||||||.||||+|+ ||||+||+
T Consensus 168 l~t~~G~l~lL~gi~ll~~~tGt~~~~~l~~~~~~~~~~~l~~~a~~LiliGa~~KsA~fPfH~WLP~Am~-APTPVSA~ 246 (800)
T PRK12645 168 LITVFGGLSMLGGFILLYIMTGSFSIREMIQHADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAME-APTPVSAY 246 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC-CCCHHHHH
T ss_conf 77777789999999999999789419999973210135709999999999999998362666131455135-89569999
Q ss_pred CC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-----
Q ss_conf 21-000002321111124400011222100000122210222200000124454435642111244211111121-----
Q gi|254780867|r 244 LA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTG----- 317 (478)
Q Consensus 244 ls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~----- 317 (478)
+| +.++|+|+|.+.|+.+.+ +..+.+...+..+|.+|+++|++.|++|+|+||++|||||||+|||+.++|.+
T Consensus 247 Lhsa~mVKaGvYll~R~~~~f-~~~~~~~~~l~~~G~iT~l~Ga~~Al~Q~DlKrlLAYSTVSqlG~i~~~lGiG~~~~~ 325 (800)
T PRK12645 247 LHSATMVKAGIYLVARFTPIF-AGSQVWFWTVTLVGLITLFWGSLNATKQTDLKGILAFSTVSQLGMIMSLLGIGAASLH 325 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 999999999999999998864-2459999999999999999999999966448999999999999999999844604431
Q ss_pred ---------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf ---------57788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 318 ---------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 318 ---------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
+.++.++++|.++|++.|.++|+++|.+.+++| +||++|+||+.|+||.++.++.++.+|++|+||++|
T Consensus 326 ~~~~~~~~~~la~~aal~hl~~HalfKa~LFl~aG~I~~~tG--trdi~~LgGL~r~mP~ta~~~~iaalSmaGiPp~~G 403 (800)
T PRK12645 326 YQGDDSKIYAAAFTAAIFHLINHATFKGSLFMIVGIVDHETG--TRDIRKLGGLMTIMPITFTIAVIGALSMAGLPPFNG 403 (800)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 111011346679999999999999999999997749999807--651988199041050999999999999837863004
Q ss_pred HHHHHHHHHHHHHCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCC----CHHHHHHHH
Q ss_conf 6759999999996284----------9999999999999999999999999649987786-556733----218999999
Q gi|254780867|r 389 FFGKYFLLISAVKREF----------YVLAIVALLSSVISAYYYLRVISIMWFDQSTECV-VVVAKE----MRLFIFGSI 453 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~----------~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~-~~~~~~----~~~~~~~~~ 453 (478)
|+||+.++++..+.+. +++..+..+++++++.|..|.....|+|+++++. ++.++| +........
T Consensus 404 F~SKe~~~~a~l~~~~~~~~~~~~~~~~~~~~a~~~s~lt~ay~~r~~~~~F~G~~~~~~~~~~~he~p~~m~~~~~~la 483 (800)
T PRK12645 404 FLSKEMFFESMLNATQANLFSLDTWGYLFPIIAWVASVFTFVYSIIFIFKTFFGKYKPEQLPKKAHEAPIGMLISPIILA 483 (800)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 88889999999860134312200289999999999999999999999999307999876589988999804877799999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 999999999767658-99999875
Q gi|254780867|r 454 LFVTGYFLIENILNS-SIMKIVMS 476 (478)
Q Consensus 454 ~~~~~~~~~~~~~~~-~~~~~~~~ 476 (478)
..++.++++|+.+.+ .+.+.+++
T Consensus 484 ~~~l~~g~~p~~~~~~~~~pa~~a 507 (800)
T PRK12645 484 SLVVVFGLFPNILTNSIIEPAVAA 507 (800)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 999999807144445668999998
No 14
>PRK06590 NADH dehydrogenase subunit L; Reviewed
Probab=100.00 E-value=0 Score=594.15 Aligned_cols=453 Identities=21% Similarity=0.290 Sum_probs=362.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-H--HHHHHHHHHHHCCC---------C-----HHHHHH
Q ss_conf 86299999999999999999998640230158999999999-9--99999999971322---------1-----003167
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVC-L--LSIALFFLLIMPYE---------G-----IGLGGA 69 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~--l~i~l~~~~~~~~~---------~-----~~~~~~ 69 (478)
|.|+..+++ ++|.++++.....++..+++........... . ++...........+ + .+.+..
T Consensus 1 mm~ll~lii-~~Pl~ga~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~ 79 (619)
T PRK06590 1 MMNLLWLIV-LLPLIGFLILGLFGGRIGEKGAHLVGTGSVGLSALLSLVVFFDFRALGGQAFNQTLWTWISVGDFDVDFG 79 (619)
T ss_pred CHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEECCCCCEEEE
T ss_conf 937999999-9999999999997512333899999999999999999999999846799627997540434177471688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64100799999999999999999999996321002242066799999999998731461022124577788777766532
Q gi|254780867|r 70 YISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMN 149 (478)
Q Consensus 70 ~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~ 149 (478)
+.+|.++..+..++...+..+.+++.+|++++++. +||+.++.++..+|++++.|+|++++|++||++++++|.||++|
T Consensus 80 ~~~D~ls~~~~~~~~~i~~~v~~ys~~ym~~~~~~-~rf~~~l~lf~~~ml~~v~a~nl~~~~v~wE~~~l~sy~LI~~~ 158 (619)
T PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAGDPGY-SRFFAYLSLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158 (619)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86408789999999999999999968981799865-07999999999999999997229999999999999999999874
Q ss_pred HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 00013445555540146204679988988530010000012222111013431000012222112344444321100012
Q gi|254780867|r 150 RKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWI 229 (478)
Q Consensus 150 ~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wl 229 (478)
++|+++.+|+.||++++++||.++++|+..+|..+||+|++++.....+...+........+++.|+..|+||||||.|+
T Consensus 159 ~~~~~~~~aa~k~~i~~~~g~~~~l~gi~~l~~~~gt~~~~~i~~~~~~~~~~~~~~~~~~~l~~g~~~Ksa~~P~h~WL 238 (619)
T PRK06590 159 YKKPSANAAAMKAFVVNRVGDFGLALGIFLLFAEFGSLNYDEVFAAAPELLGNSALTLICLLLFIGAMGKSAQFPLHTWL 238 (619)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 57868899999999998476999999999999995898699999874523461399999999999999986607651434
Q ss_pred HHHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10122100123333210-00002321111124400011222100000122210222200000124454435642111244
Q gi|254780867|r 230 PDVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308 (478)
Q Consensus 230 p~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G 308 (478)
||||| +|||+||++|+ .++++|+|.+.|+.+.+ +..+.....+.++|.+|+++|++.|+.|+|+||++||||++|+|
T Consensus 239 pda~~-aPtpvSAllha~~~v~aGvy~~~r~~~~~-~~~~~~~~~i~~~g~~t~~~g~~~al~Q~d~KrllAYStisq~G 316 (619)
T PRK06590 239 PDAME-GPTPVSALIHAATMVTAGVYLVARMSPLF-ELSPEALHFVTIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLG 316 (619)
T ss_pred HHHHC-CCCCHHHHHHHHHHHHHHHHEEHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66624-89846788728999998863110304451-12789999999999999999999999650268888977988999
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 21111112157788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 309 YALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 309 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
||+++++.+ +..++++|+++|++.|..+|+++|.+.++.+ ++||++|+||+.|+||.++.+++++.+|++|+||++|
T Consensus 317 ~m~~~~g~~--~~~~a~~h~~~Ha~~Ka~LFl~aG~vi~~~~-~~~~~~~~gGl~~~mP~t~~~~~i~~lsl~G~Pp~~G 393 (619)
T PRK06590 317 YMFLALGVG--AYAAAIFHLMTHAFFKALLFLGAGSVIHAMH-HEQDIRKMGGLRKKMPVTYATFLIGTLALIGLPPFAG 393 (619)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HEEHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999987--8899999999999999999998889998743-2001876289400078999999999998614402206
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 675999999999628499999999999999999999999996499877865567332189999999999999997676
Q gi|254780867|r 389 FFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENIL 466 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
|+||+.++++.++++.+....+.++++.++..|..|.+...|+|||+.+..+..+|.+..+....+..+..++..|.+
T Consensus 394 F~sK~~i~~~~~~~~~~~~~~~~~~~~~~t~~y~~r~~~~~f~g~~r~~~~~~~HE~p~~M~~PLvILAilsi~~G~l 471 (619)
T PRK06590 394 FFSKDEILEAAFANGHGFLFVAGLVGAFLTAFYSFRLIFLVFHGKERWHVDHHPHESPGVMTLPLIVLAVLSVFAGAL 471 (619)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 978999999998705739999999999999999999999970789998776677888625999899999999999999
No 15
>COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]
Probab=100.00 E-value=0 Score=593.28 Aligned_cols=470 Identities=41% Similarity=0.677 Sum_probs=427.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86299999999999999999998640230158999999999999999999971322100316764100799999999999
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMS 86 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~ 86 (478)
++|+..++||+++..+++..++.+.+.++ +...........+..+.......+.++..+.+.+..|..+.+........
T Consensus 2 ~~~~~~~lPeiil~~~~~~~l~~~~~~~~-~~~~~~~la~~~l~~a~~~l~~~~~~~~~~~~~~~~d~~a~~~~~~~l~~ 80 (475)
T COG1007 2 SSNLSLLLPEIILAITALVLLLVGLFIRR-SRSLLAYLAVLGLLAALASLLFIAYRGSAFAGAFIVDALALLMKIVVLLA 80 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20267771799999999999999998511-28799999999999999999972676403367887746899999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
Q ss_conf 99999999999632100224206679999999999873146102212457778877776653200013445555540146
Q gi|254780867|r 87 SIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLG 166 (478)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~ 166 (478)
++.+..++..+.+.++.++.|||.+.++...|+..+.+|||+..+|++||++|+++|.|+++.|+|+++.||++||++++
T Consensus 81 s~~~l~~s~~~~~~~~~~~~Efy~L~l~a~lG~~~~~sa~~l~~lfiglEl~Sl~~Y~L~a~~r~~~~s~EaalKYfvlG 160 (475)
T COG1007 81 SLAALILSLPYLERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLG 160 (475)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99999985799996687525899999999999999998410999999999999999999984177641257778999889
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 20467998898853001000001222211101343100001222211234444432110001210122100123333210
Q gi|254780867|r 167 AFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLAT 246 (478)
Q Consensus 167 ~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~ 246 (478)
.+++.+++.|++++|..|||++++++.+.....++......+.+++++|+++|.+.+|||.|.||+||+||+|+++++|+
T Consensus 161 alsS~~~l~G~al~Y~~tGsl~l~~i~~~~~~~~~~~~l~~g~vfii~gl~FKlsavPFH~W~PDVYeGApt~v~afls~ 240 (475)
T COG1007 161 ALSSAFLLYGIALVYGATGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAFLST 240 (475)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 89999999999999961788761788865126764249999999999999999734762015740116999307899875
Q ss_pred CEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHH
Q ss_conf 00002321111124400011-2221000001222102222000001244544356421112442111111215-778888
Q gi|254780867|r 247 IPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAM 324 (478)
Q Consensus 247 ~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~ 324 (478)
++|++++..+.|++....+. .+.|+.++..+++.||.+|++.|+.|+|+||++|||||+|+||+++|+..++ .+..+.
T Consensus 241 a~Kia~f~vl~Ri~~~~~~~~~~~~~~i~~iiAv~SM~~GN~~Al~Q~nvKRlLAYSSIah~Gy~L~gl~a~~~~g~~a~ 320 (475)
T COG1007 241 APKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAYSSIAHMGYLLVGLAAVTVGGYAAV 320 (475)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 27899999999999970676421599999999999999999999985159999998489889999999997030222369
Q ss_pred HHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 64300232010011000026787408764550210466523211478999986530366500006759999999996284
Q gi|254780867|r 325 VRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF 404 (478)
Q Consensus 325 ~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~ 404 (478)
++|...|++++.+.|.++..++++.++ .+++++++|+.|++|..+.++.+..+|++|+||+.|||+|++++.+.++++.
T Consensus 321 ~~y~l~Y~~~~lgaf~~v~~~~~~~~~-~~~~~~~~GL~~~~P~~A~~~~i~m~SLaGIPP~~GF~gK~~vf~~av~~~~ 399 (475)
T COG1007 321 LFYLLAYAFMSLGAFGVVALLSSKEGG-AESISDLAGLSKRHPLLAALLTILMLSLAGIPPLAGFWGKFYVFLAAVQAGL 399 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 999999999998999999998667887-5324644050336868999999999997589840129999999999997386
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999996499877865567--332189999999999999997676589999987519
Q gi|254780867|r 405 YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA--KEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 405 ~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
+|++++.+++|+++++||+|+++.+|++||+++.++.+ .+.+.....+.+.....++.|+++.+...+..+..+
T Consensus 400 ~~Laii~vl~S~isa~YYlRvv~~m~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lgi~~~~~~~~~~~a~~~~~ 475 (475)
T COG1007 400 WWLAVIAVLNSAISAYYYLRVVKAMYFEEPEGAFRDAPQYTALKAVLLVAAILVLVLGILPQPVIDLAAQAAAVLF 475 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999799899999999999707864445554455503799999999999999703989999999877429
No 16
>PRK08376 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=594.91 Aligned_cols=459 Identities=24% Similarity=0.398 Sum_probs=370.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH--HHHCCCC--------------HHHHHHHHHHHHHH
Q ss_conf 9999999999999998640230158999999999999999999--9713221--------------00316764100799
Q gi|254780867|r 14 IPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL--LIMPYEG--------------IGLGGAYISDRFSY 77 (478)
Q Consensus 14 lP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~--~~~~~~~--------------~~~~~~~~~D~~s~ 77 (478)
++.++|.++++..+..++..+|.+.......+........... ...+.+. .+.+..+.+|.+|.
T Consensus 9 lli~iPl~~All~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~vD~ls~ 88 (513)
T PRK08376 9 LLIIIPLFGAFSMPIVSLAGGKAREAWAVLISFATLLVGIQVFREVWEKGTIVYALGAEAPFGSGGFPIRIVWEVDKFGA 88 (513)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECHHHH
T ss_conf 99999999999999986227249999999999999999999999997589837986111454578877468876627669
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999999999632100224206679999999999873146102212457778877776653200013445
Q gi|254780867|r 78 FIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIE 157 (478)
Q Consensus 78 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~ 157 (478)
.+..+..+.+..+.+++.++.++++. .+|||.+++++..|+++++.|+|++++|++||++++++|.||+++++++++.|
T Consensus 89 ~~~ll~~~i~~l~~lys~~~~~~~~~-~~~f~~l~ll~~~g~~g~~~s~dl~~~fvf~E~~~l~sy~Li~~~~~~~~~~~ 167 (513)
T PRK08376 89 FMVLIAAIVSFLAVLYSISYMKHDTG-LDKFYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRNDTWEAIE 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999999995797548987-65999999999999999999827999999999999999999999499799999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 55554014620467998898853001000001222211101343100001222211234444432110001210122100
Q gi|254780867|r 158 AALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSP 237 (478)
Q Consensus 158 aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap 237 (478)
|++||++++.+|+.++++|+.++|..+||+|++++.....+.+ +.....+..+++.|+++|+|++|||.|+||+|++||
T Consensus 168 aa~ky~i~~~~gs~~~L~gi~~ly~~~Gs~~~~~l~~~~~~~~-~~~~~~~~~l~~~g~~~K~a~~PfH~WLPday~~AP 246 (513)
T PRK08376 168 AGIKYMFVGSLASSLVLLGIALLYGQYGTLTMGYLAVKMSENP-TIVAKIALALFIAGLLFKSGAVPVHMWLADAHPAAP 246 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999999999999999808750999999875171-699999999999999998726131746300424286
Q ss_pred CCCCCCCCCCEEC-CCCCCCCCCCCCCCCCC---CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1233332100000-23211111244000112---2210000012221022220000012445443564211124421111
Q gi|254780867|r 238 MFMTAFLATIPKF-ATTMALCRITSVFWPML---SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG 313 (478)
Q Consensus 238 ~~~salls~~~~~-~~~~~l~r~~~~~~~~~---~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~ 313 (478)
+|+|+++|++..| +|.|.+.|+....++.. ......+.++|++|+++|++.|+.|+|+||++|||||+|+||+++|
T Consensus 247 t~vSallsg~~~k~ag~y~l~r~~~~~f~~~~~~~~~~~~l~~lg~~t~~~G~~~Al~Q~d~KrlLAYSSIsq~G~illg 326 (513)
T PRK08376 247 SSISAMLSGLVIKIGGIYAIARILFSIYGPTINPATVGWVIIIFACLTLIVGNAMAVPQKDMKRLLAYSSVGQIGYILLG 326 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999743054578999999999999999999999761028899998589999999999
Q ss_pred CCCH---------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 1121---------5778888643002320100110000267874087645502104665232114789999865303665
Q gi|254780867|r 314 FSTG---------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIP 384 (478)
Q Consensus 314 l~~~---------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlP 384 (478)
++.+ +.++.++++|+++|++.|.++|+++|.+.+++| +||++|+||+.|+||.++.++.++.+|++|+|
T Consensus 327 i~~g~~~~~~~~~~~~~~ga~~~~i~H~~~k~~LFl~~G~i~~~~g--t~~i~~lgGL~~~~P~~a~~f~i~~lsl~GlP 404 (513)
T PRK08376 327 LGIGLAAYGSRTGEIALAGAIYHIVNHALMKALLFLVAGAVIHELG--TRNLNELSGLAKTMPKTTFAFLIGAAAIVGMP 404 (513)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9850120022105889999999999999999999999889998337--76199864978773999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHH
Q ss_conf 00006759999999996284999999999999999999999999964998778655673---321899999999999999
Q gi|254780867|r 385 PFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAK---EMRLFIFGSILFVTGYFL 461 (478)
Q Consensus 385 p~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 461 (478)
|++||+|||+++++..+.+ ++++.+.+++++++..||.|+++. ++++|+++.++.++ .+...+.+....++.+++
T Consensus 405 p~~GF~sK~~i~~~~~~~~-~~l~~i~~~~s~~~~~~~~r~~~~-~fg~~~~~~~~~~~~~~~~~~~~~vl~~~~i~~Gl 482 (513)
T PRK08376 405 PLNGFASKWLIYESSALFN-PILGAIAIIGTAFCTAAYVRVLHT-FFGRPSEKVMNAKDPPKLMLLPMIILVIAIIGMGL 482 (513)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8706999999999999984-999999999999999999999999-93999855578889977599999999999999997
Q ss_pred HHHHHHH-HHHHHHHHCC
Q ss_conf 9767658-9999987519
Q gi|254780867|r 462 IENILNS-SIMKIVMSLF 478 (478)
Q Consensus 462 ~~~~~~~-~~~~~~~~l~ 478 (478)
+|+++.+ ...+.+++++
T Consensus 483 ~P~~~~~~~~~~aa~~l~ 500 (513)
T PRK08376 483 FPWQISDKLMAPAARALW 500 (513)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 159999999999999871
No 17
>PRK06521 hydrogenase 4 subunit B; Validated
Probab=100.00 E-value=0 Score=591.91 Aligned_cols=407 Identities=18% Similarity=0.274 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 031676410079999999999999999999999632100-2242066799999999998731461022124577788777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
..+.++.+|.+|.++..++...+..+.+|+.+|+++.++ +.++++.++.++..+|++++.|+|++++|++||++++++|
T Consensus 70 ~~~~~~~lD~LSa~fllli~~v~~~~~lYs~~Y~~~~~~~~~~~~~~~~~lf~~~m~~vv~a~dl~~f~vfwElm~l~sy 149 (670)
T PRK06521 70 WLPFHLRLDSLSAFFLLVISLLGAAASLYSLGYGREYEGKGPGRMGFFYNLFLASMVLVLLADDAFSFLVAWEMMSLSSW 149 (670)
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87558898777899999999999999998058741067876028999999999999999999589999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||..+++++++.+|++||++++++|+.++++|+.++|..+||+|++++.+.. .++......+.++++|++.|+|+|
T Consensus 150 ~LV~~~~~~~~~~~Aa~~y~i~~~~G~~~lL~g~~lly~~~Gs~~f~~~~~~~---~~~~~~~~~f~l~l~Gf~~Kagl~ 226 (670)
T PRK06521 150 FLVMANHRDAENRRAGFLYLLMAHAGTLAILLAFGLLAGESGSYDFAAMRAAH---LSPFLASLVFLLALFGFGAKAGLV 226 (670)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99984089899999999999999999999999999999994791099998505---561689999999999999873737
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100000232111112440001122-2100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS-GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~-~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.|+||+|++||+|+||++|++++|+|+|+++|+.....+..+ .+...+.++|.+|+++|++.|+.|+|+||++|||
T Consensus 227 PfH~WLP~A~~~APtpVSALlSgvmvK~GvygliR~~~~l~~~~~~~~~~~ll~lg~~t~v~G~l~Al~Q~DiKRlLAYS 306 (670)
T PRK06521 227 PLHVWLPRAHPAAPSHVSALMSGVMTKVAIYGILRVVFDLLGAPQWWWGVLVLALGAISAVLGVLYALAETDLKRLLAYS 306 (670)
T ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55022157778898089999988899999999999888704634889999999999999999999999884589999998
Q ss_pred CCCCCCCCCCCCCCH------------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHH
Q ss_conf 111244211111121------------57788886430023201001100002678740876455021046652321147
Q gi|254780867|r 303 SIGHAGYALIGFSTG------------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLT 370 (478)
Q Consensus 303 si~q~G~i~~~l~~~------------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~ 370 (478)
||+|+|||++|++.+ ..++.++++|++||++.|.++|+++|.+.+++| +||++|+||+.|+||+++
T Consensus 307 SIsq~G~i~lglG~~~~~~~~g~~~l~~l~~~gal~H~~nHa~fK~lLFl~aG~v~~~tg--tr~i~~mgGL~~~mP~t~ 384 (670)
T PRK06521 307 TIENIGIIFVGLGLAMVFIAYGMPALAALALTAALYHLLNHALFKSLLFLGAGAVLHATG--TRDMEKLGGLIRRMPWTA 384 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHHHHHH
T ss_conf 899999999999852331001210213789999999999999999999999999999968--651889589554347999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH---H-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8999986530366500006759999999996284---9-------99999999999999999999999964998778655
Q gi|254780867|r 371 CALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF---Y-------VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV 440 (478)
Q Consensus 371 ~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~---~-------~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~ 440 (478)
.+++++.++++|+||++||+|||+++++.++... + ..+....+.+.++..|+.|.+...|.|+|+++...
T Consensus 385 ~~flig~lai~GlPP~~GF~Sk~li~q~~~~~~~~~~~~~~~~~~~~~~~lal~~ala~~~fvk~~g~~FlG~pR~~~~~ 464 (670)
T PRK06521 385 WAFLIGCLAISALPPLNGFVSEWLLFQSLLSSPGLPQWGLKLLVPLAAALLALTAALAAMCFVKFYGITFLGRPRSPKAE 464 (670)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999986366425499999999999845666615899999999999999999999999999998303799987655
Q ss_pred CCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 673321----899999999999999976765899999875
Q gi|254780867|r 441 VAKEMR----LFIFGSILFVTGYFLIENILNSSIMKIVMS 476 (478)
Q Consensus 441 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (478)
..+|.+ ..+......|+..++.|+...+.+.+...+
T Consensus 465 ~~~e~p~~m~~~m~iLA~~cv~~Gl~p~~~~~~l~~~~~~ 504 (670)
T PRK06521 465 QAHEVPRWMRAAMLLLAALCVLLGLLPGWVAPLIAPVAQA 504 (670)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 7787974357999999999999995548779888899987
No 18
>PRK12649 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=590.23 Aligned_cols=458 Identities=19% Similarity=0.250 Sum_probs=360.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCC----------CHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998640230158999999999999999999-971322----------10031676410079999999
Q gi|254780867|r 14 IPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL-LIMPYE----------GIGLGGAYISDRFSYFIKAI 82 (478)
Q Consensus 14 lP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~-~~~~~~----------~~~~~~~~~~D~~s~~~~~l 82 (478)
+-.+++.+++...+...+..+++..+................. ....++ ..+.+..+..|.+|..+..+
T Consensus 9 l~I~lPfi~A~l~pll~r~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~G~~~~~~~~Wip~~gi~~~~~~DgLs~l~~ll 88 (800)
T PRK12649 9 IAIFLPFIFAGLLPVLEKLFKQRIGWFAAAIAFACFALIAMAAPETIAGQIIQGSFSWIPAAGLNFDFYADGLATLIAFI 88 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHH
T ss_conf 99999999999999998741067899999999999999999988850797689874115778855898642778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999963210022420667999999999987314610221245777887777665320001344555554
Q gi|254780867|r 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKY 162 (478)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky 162 (478)
+...+.++.+|+.+|+.+++ +..|||.+++++..+|++++.|+|++++|+|||++++++|.||++|++++++.++++||
T Consensus 89 i~~Ig~lv~lYs~~Ym~~~~-~~~rFy~~lllf~~aMlGlvla~dl~~lfvFWEl~~l~SylLIg~~~~~~~a~~aA~k~ 167 (800)
T PRK12649 89 ASGIGVIIMSYSNGYMSRKE-DLPRYYQWLLLFMGAMIGIAFSDNTIQLFIFWELTSITSFMLIGYWREKPESIYGATKA 167 (800)
T ss_pred HHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999999999589728999-81479999999999999999982599999999999999999988509888999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 01462046799889885300100000122221110---134310000122221123444443211000121012210012
Q gi|254780867|r 163 FVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLF---IGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMF 239 (478)
Q Consensus 163 ~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~---~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~ 239 (478)
++++++|+.+++.|+.++|..+||+|++++.+... ....+........++++|+..|+||||||.||||+|+ ||||
T Consensus 168 ~l~t~~G~l~lL~gi~ll~~~tGt~~~~~i~~~~~~~~~~~~~~l~~~~~~LiliG~~~KsAqfPfH~WLPdAm~-APTP 246 (800)
T PRK12649 168 FLITAGGGLAMFAGFLLLGNITGSFEIAAIANDPELINAIHEHELFLATLILIFIGAAAKSAQGPFYIWLPNAME-APTP 246 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCHHCC-CCCH
T ss_conf 999999999999999999999857589999842666521245519999999999999988451556232110204-8863
Q ss_pred CCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 333321-0000023211111244000112221000001222102222000001244544356421112442111111215
Q gi|254780867|r 240 MTAFLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM 318 (478)
Q Consensus 240 ~salls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~ 318 (478)
+||++| +.++|+|+|.+.|+.+.+. ..+.+...+..+|.+|+++|++.|++|+|+||++|||||+|+|||++++|.++
T Consensus 247 VSA~Lhsa~mVKaGvyll~R~~p~~~-~~~~~~~~l~~~G~iT~l~ga~~Al~Q~DlKrlLAYSTVSqlG~i~~~~G~gt 325 (800)
T PRK12649 247 VSAFLHSATMVKAGIYLVARIHPIFS-GTEAWFILVSGTGIITMLMAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYST 325 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999989884-03999999999999999999999983555899999988999999999997377
Q ss_pred -----HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf -----778888643002320100110000267874087645502104665232114789999865303665000067599
Q gi|254780867|r 319 -----LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKY 393 (478)
Q Consensus 319 -----~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~ 393 (478)
.++.++++|+++|++.|.++|+++|.+.+++| +||++|+||++|+||+++.++.++.+|++|+||++||+||+
T Consensus 326 ~~~~~~~~~aa~~hl~~HalfKa~LFl~aG~i~~~tg--trdi~~lgGL~r~MP~T~~~~~iaalsmaGvPp~~GF~sKe 403 (800)
T PRK12649 326 AEEPGIGFAAATFHLLNHAAFKACLFLVAGIVAHEAA--TRDIRKLGGLRKEMPITFIIACIAAAAMAGIPPLNGFLSKE 403 (800)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 3214579999999999989999999997759999807--51188848942126799999999999980786210788579
Q ss_pred HHHHHHHHCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCC----HHHHHHHHHHH
Q ss_conf 99999996284-----------99999999999999999999999996499877865--567332----18999999999
Q gi|254780867|r 394 FLLISAVKREF-----------YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV--VVAKEM----RLFIFGSILFV 456 (478)
Q Consensus 394 ~i~~~~~~~~~-----------~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~--~~~~~~----~~~~~~~~~~~ 456 (478)
.++++..+.+. ..+.....+++++++.|..|.....|+|+++++.. +..+|. ..........+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~lt~~y~~r~~~~~F~g~~~~~~~~~~~~~e~p~~m~~p~~iLa~~~ 483 (800)
T PRK12649 404 MFYESSIEIGALISETYGGIFAFIFPAFAVAGGVFTFAYSIKLIDGIFLGERDHDHAIPHHIHEAPMTMLAPAAFLAFLI 483 (800)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999987423443202444999999999999999999999999982179999987787786778722457899999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHH
Q ss_conf 999999767658-99999875
Q gi|254780867|r 457 TGYFLIENILNS-SIMKIVMS 476 (478)
Q Consensus 457 ~~~~~~~~~~~~-~~~~~~~~ 476 (478)
+.++++|+...+ .+.+..++
T Consensus 484 ~~~g~~p~~~~~~l~~~a~~~ 504 (800)
T PRK12649 484 IFFGLIPSFPIHVIIEPAVSG 504 (800)
T ss_pred HHHHHCCCHHHHHHHHHHHHH
T ss_conf 999955302356778999985
No 19
>PRK12647 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=591.61 Aligned_cols=407 Identities=22% Similarity=0.303 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..+..++...+..+.+|+.+|+++++ +..|||.+++++..+|++++.|+|++++|+|||++++++|+
T Consensus 55 gi~~~~~lDgLS~lf~llv~~ig~lv~~Ys~~Ym~~~~-~~~rFy~~lllf~~aMlGlvla~dl~~lfvfWEl~~l~Syl 133 (761)
T PRK12647 55 GVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHP-HLGRFYGYILLFMASMLGLVLSDNLITLFVFWELTSISSFL 133 (761)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97599950586899999999999999999789738999-80389999999999999999983799999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|++++++.++++||++++++|+.+++.|+.++|..+||+|++++........++........++++|+..|+||||
T Consensus 134 LIg~~~~~~~a~~AA~k~ll~t~~G~l~lL~gi~ll~~~tGt~~~~~l~~~~~~~~~~~l~~~~~~Liliga~~KsAqfP 213 (761)
T PRK12647 134 LIGFNHERAAARKAALQALLVTGGGGLALLAGLILLGNVTGTYSISELLSMGDVIREHPLYLAILLLVLGGAFTKSAQFP 213 (761)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98123997899999999999999999999999999999977766999997356531573899999999999998832055
Q ss_pred CCHHHHHHHHHHCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000121012210012333321-0000023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.||||||+ ||||+||++| +.++|+|+|.+.|+.+.+.+ .+.+...+.++|.+|+++|++.|++|+|+||++||||
T Consensus 214 fH~WLPdAm~-APTPVSA~LhSa~mVKaGvYll~R~~p~~~~-~~~~~~~l~~lG~~T~l~Gal~Al~Q~DlKrlLAYST 291 (761)
T PRK12647 214 FHFWLPNAME-APTPVSAYLHSATMVKAGIYLLARLNPVLGG-TALWQVILPLFGGLTMLAGALLAVRQTDLKLILAYST 291 (761)
T ss_pred CHHHCCHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4330502214-8972889999999999999999999787513-5999999999999999999999986302889999999
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 112442111111215-7788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 304 IGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 304 i~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|+|+|||+++++.++ .+..++++|+++|++.|.++|+++|.+.+++| +||++|+||++|+||+++.++.++.+|++|
T Consensus 292 VSqlG~i~l~lGlgt~~a~~aal~hl~~HalfKa~LFl~aG~i~~~tg--trdi~~LgGL~r~mP~T~~~~~iaalsmaG 369 (761)
T PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETG--TRDITKLGGLRRAMPITAAAALLAALSMAG 369 (761)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHCHHHHHHHHHHHHHHCC
T ss_conf 999999999987677899999999999999999999999999999948--960777578563065999999999999817
Q ss_pred CCHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH---HHHHHHHHH
Q ss_conf 6500006759999999996284--99999999999999999999999996499877865567332189---999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREF--YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLF---IFGSILFVT 457 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~--~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 457 (478)
+||++||+||+.++++..+.+. .++.....+++++++.|..|.....|+||+++++++..|++..+ .....+.++
T Consensus 370 lPp~~GF~SKe~~~~a~~~~~~~~~~~~~~~~~~s~lt~ay~~~~~~~~F~g~~~~~~~~~~e~p~~m~~p~~iLa~~~~ 449 (761)
T PRK12647 370 LPPLFGFIGKELLYEALLEAPLWSLFLTVAAVLANALMVAVAFLVGLRPFLGKLVETPKHPHEAPVLMWLGPAVLAVLGL 449 (761)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 85201498999999998627750589999999999999999999999973289988888989897167688999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHH
Q ss_conf 9999976765899-999875
Q gi|254780867|r 458 GYFLIENILNSSI-MKIVMS 476 (478)
Q Consensus 458 ~~~~~~~~~~~~~-~~~~~~ 476 (478)
.+++.|+...+++ .+..++
T Consensus 450 ~~g~~p~~~~~~l~~~a~~~ 469 (761)
T PRK12647 450 LFGLFPFFFHAALLSPAASA 469 (761)
T ss_pred HHHHCCHHHHHHHHHHHHHH
T ss_conf 99807153367789999985
No 20
>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=100.00 E-value=0 Score=589.63 Aligned_cols=451 Identities=24% Similarity=0.345 Sum_probs=381.0
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH------------HHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998640230158999999999999999999------------9713221003167641007999999999
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL------------LIMPYEGIGLGGAYISDRFSYFIKAILL 84 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~------------~~~~~~~~~~~~~~~~D~~s~~~~~l~~ 84 (478)
+.+.+.+..+++.-++.||-..-+......+.+-.....+ -..+.+..+.|-..+.|+++..|..++.
T Consensus 6 ilp~~~a~~IpIly~~~~rih~gWFvl~~plV~F~y~l~L~p~t~sGgv~h~ti~WvP~lG~NFtly~DGl~lLFslLIt 85 (809)
T TIGR00940 6 ILPLLLALLIPILYKYDKRIHIGWFVLAIPLVLFLYTLSLLPITASGGVVHKTIDWVPELGLNFTLYLDGLALLFSLLIT 85 (809)
T ss_pred EHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 07899999988744222320246889999999999999765565159602101587766787421344258999999998
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf 99999999999996321002242066799999999998731461022124577788777766532000134455555401
Q gi|254780867|r 85 MSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFV 164 (478)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~ 164 (478)
.++.++.+|+.+|..+++++-.+||++++.++.+|+|+++|||++.+++|||+.|++|++||++|++|++|..+|.|-++
T Consensus 86 gIG~LVvLYsiyYlskk~e~l~nFy~ylL~FMGaMLGVVLSdNlI~LyvFWELTS~~SfLLIsyW~hr~~s~ygAqksl~ 165 (809)
T TIGR00940 86 GIGVLVVLYSIYYLSKKEEKLPNFYVYLLLFMGAMLGVVLSDNLIVLYVFWELTSLASFLLISYWFHREKSRYGAQKSLL 165 (809)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999987775301267616999999995356546787789999999999999999998888746888899875434
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 46204679988988530010000012222111013431000012222112344444321100012101221001233332
Q gi|254780867|r 165 LGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244 (478)
Q Consensus 165 ~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sall 244 (478)
++.+|+.-++.|+.+++..+||++++++.+...+..+++....+.+++++|..+|+||||||.||||||| |||||||||
T Consensus 166 ITvfGGlamlgG~ill~~itgsfsi~~~i~~adai~nsplf~~am~LvllGAfTKSAQFPFhiWLPdAMe-APTPVSAYL 244 (809)
T TIGR00940 166 ITVFGGLAMLGGLILLAVITGSFSIDAVIESADAIRNSPLFLTAMVLVLLGAFTKSAQFPFHIWLPDAME-APTPVSAYL 244 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCHHHHH
T ss_conf 6432368999999988575163239999961135420523899999999987654203875547802116-858402767
Q ss_pred CCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCH----
Q ss_conf 100-00023211111244000112221000001222102222000001244544356421112442111--11121----
Q gi|254780867|r 245 ATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALI--GFSTG---- 317 (478)
Q Consensus 245 s~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~--~l~~~---- 317 (478)
|+. +.|+|.|.+.|+-+.+.+ .++|...+...|++|...|++.|.+|+|+|-+||||||||+|.|+. ++|..
T Consensus 245 HSATMVKAGlyL~aR~tPvfag-t~~WfW~v~l~GliTL~wgs~~A~~QqDLKgiLAfSTiS~LGlI~~llglGs~~~Hy 323 (809)
T TIGR00940 245 HSATMVKAGLYLVARLTPVFAG-TEAWFWIVALVGLITLLWGSLSAVKQQDLKGILAFSTISQLGLIMVLLGLGSASLHY 323 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
T ss_conf 6679999889988876112027-557999999999999999999876676667788898885899999999623032154
Q ss_pred ----------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf ----------5778888643002320100110000267874087645502104665232114789999865303665000
Q gi|254780867|r 318 ----------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFA 387 (478)
Q Consensus 318 ----------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~ 387 (478)
..|..++++|++||+..|..+|+..|.+.|++|| ||++|+|||..-||+++..-+++.+|++|+||++
T Consensus 324 ~~~DSmiK~YA~A~~AAvFHliNHATFKgsLFM~~GiiDHetGT--RDirkLGGL~~iMPitfT~~~i~~aaMAGvPpfN 401 (809)
T TIGR00940 324 DGDDSMIKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGT--RDIRKLGGLLAIMPITFTVALIASAAMAGVPPFN 401 (809)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC--HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 88723899999999999998886578768887551502458886--1576526501044689999999999844775334
Q ss_pred HHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHH-
Q ss_conf 0675999999999628----------49999999999999999999999999649987-78655673321899999999-
Q gi|254780867|r 388 GFFGKYFLLISAVKRE----------FYVLAIVALLSSVISAYYYLRVISIMWFDQST-ECVVVVAKEMRLFIFGSILF- 455 (478)
Q Consensus 388 GF~sK~~i~~~~~~~~----------~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~- 455 (478)
||-||..-++..++++ .+.+++++.++|+.++.|..|++...|+||+| |+.++.++|.+..+..+..+
T Consensus 402 GFLSKEmFf~~~~~a~~~n~f~~~T~GyLFP~~a~vasvFtfvYs~~fi~~~FfG~~Kpe~lp~k~HE~p~~Ml~sp~iL 481 (809)
T TIGR00940 402 GFLSKEMFFAEAITASLVNLFDVETLGYLFPVVAIVASVFTFVYSLKFIFRVFFGRYKPEDLPKKAHEAPILMLLSPAIL 481 (809)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHH
T ss_conf 21127888888888751574220256678779999999999999999998651688560126798887760753068889
Q ss_pred ---HHHHHHHHHHHHHHHH
Q ss_conf ---9999999767658999
Q gi|254780867|r 456 ---VTGYFLIENILNSSIM 471 (478)
Q Consensus 456 ---~~~~~~~~~~~~~~~~ 471 (478)
++.++++|+.+.+++.
T Consensus 482 ~~lv~vfGlfP~~l~~~ii 500 (809)
T TIGR00940 482 ALLVVVFGLFPALLTGSII 500 (809)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 8888875400245763378
No 21
>TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase, chain M; InterPro: IPR010227 This entry describes the 13th (based on Escherichia coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=590.20 Aligned_cols=453 Identities=23% Similarity=0.340 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHH-----HHH-HHHHH--HHHHHHHHHH-HHHCCC--CH----------H-H--HHHHHH
Q ss_conf 9999999999998640230158-----999-99999--9999999999-971322--10----------0-3--167641
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNA-----FHL-VVFPV--CLLSIALFFL-LIMPYE--GI----------G-L--GGAYIS 72 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~-----~~~-~~~~~--~~l~i~l~~~-~~~~~~--~~----------~-~--~~~~~~ 72 (478)
.+|.++++.++.....+++.+. ++. ...+. ..+.+.+... +....+ +. . + +-...+
T Consensus 6 flPligal~~l~~~~~~~~~~~~~~~~r~~Al~~~~~~l~l~~~l~~~~fD~~~~~~~fQ~~e~~~Wip~~lG~~Y~lGV 85 (532)
T TIGR01972 6 FLPLIGALLILLLPRQNNKGKAREQAVRWIALVVALATLLLSLLLLFQEFDPTNSGPGFQFTESLPWIPADLGISYHLGV 85 (532)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEH
T ss_conf 89999999999834567760258999999999999999999999986043345664440157731122345570464203
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHC--CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0079999999999999999999999632--100--224206679999999999873146102212457778877776653
Q gi|254780867|r 73 DRFSYFIKAILLMSSIIIFIKMFSCIYV--KPF--SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 73 D~~s~~~~~l~~~~~l~~~~~~~~~~~~--~~~--~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
|+.|..+..+..+ ++.+...+.++. .++ +.++|+.+++....+++|++.|.|++.||+|||.+.+|.|++|+.
T Consensus 86 DGiSl~l~~LtaL---lt~l~~~~~w~~R~i~k~g~~k~f~~~~L~le~~~~G~F~A~D~~LFY~FwE~~LiPmyllIg~ 162 (532)
T TIGR01972 86 DGISLLLVLLTAL---LTLLSILASWESREIQKEGRVKEFYALLLLLEAGVIGVFLALDLLLFYVFWEAMLIPMYLLIGV 162 (532)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2799999999999---9999999865440104788579999999999999999999998999999999999889999864
Q ss_pred HH-----CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC------CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20-----00134455555401462046799889885300100------00012222111013431000012222112344
Q gi|254780867|r 149 NR-----KSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG------CTGFSQIATSLFIGHRSFVLIVGVVLILVGLF 217 (478)
Q Consensus 149 ~~-----~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g------s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~ 217 (478)
|+ ++ ++..||+|+++|+..||.++|+|+..+|..+| |+|+.++.+...+.+ ...+.+.+..+++||.
T Consensus 163 WGdka~~g~-~R~yAA~KFfLYTl~GSvlML~a~l~l~~~~g~~~~~~tF~l~~l~~~~~~~~-~~~q~~Lf~aFf~aFA 240 (532)
T TIGR01972 163 WGDKAEAGP-NRIYAAMKFFLYTLAGSVLMLLAILGLYFLGGTQLLILTFDLAELLNQPVNLP-LSVQTWLFLAFFIAFA 240 (532)
T ss_pred HCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCH-HHHHHHHHHHHHHHHH
T ss_conf 110013646-52378899999999999999999999999823411121034288740213641-9999999999999855
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 444321100012101221001233332100000232111112440001-1222100000122210222200000124454
Q gi|254780867|r 218 FKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLK 296 (478)
Q Consensus 218 ~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~K 296 (478)
+|+++||+|+||||||++|||++|..|+|+..|.|.|+++|+..+++| +..++.+++.++|+++++||++.|++|+|+|
T Consensus 241 vK~PlfPlHTWLPDAH~~Apt~gSV~LaGvLlK~G~YGflRf~LpLfPdas~~f~p~~~~L~~~~IiYgal~A~aQ~D~K 320 (532)
T TIGR01972 241 VKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALAVIAIIYGALIALAQTDIK 320 (532)
T ss_pred HCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22477665334320310277468999999999888899999876544999999999999999999999999999986288
Q ss_pred CCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCC----CCCHHHH
Q ss_conf 4356421112442111111-2157788886430023201001100002678740876455021046652----3211478
Q gi|254780867|r 297 RLMAYSSIGHAGYALIGFS-TGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSR----QDIFLTC 371 (478)
Q Consensus 297 rllAySsi~q~G~i~~~l~-~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~----~~P~~~~ 371 (478)
|++||||||||||+++|+. .++.|+.|+++++++|++...++|+++|.+++|.+ +||++++||+.+ +||+.+.
T Consensus 321 rLiAYSSiSHMGfV~LGifs~n~~G~~GA~~qM~~HGl~~a~LFl~vG~ly~R~h--Tr~i~~~GGl~~hp~~~mP~~~~ 398 (532)
T TIGR01972 321 RLIAYSSISHMGFVLLGIFSFNELGISGAVLQMISHGLITAALFLLVGVLYDRAH--TRDIAKYGGLANHPYRKMPVLAA 398 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999863579999999999761889999999999866999999999999986324--33378625134302111147999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------
Q ss_conf 999986530366500006759999999996-------28499999999999999999999999996499-----------
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVK-------REFYVLAIVALLSSVISAYYYLRVISIMWFDQ----------- 433 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~-------~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~----------- 433 (478)
.++++.+|..|+|.++||+||++++.+.++ . .++.++++.++.++++.|.+..++++|+||
T Consensus 399 f~~~~~~As~GlPGt~GFvGEFl~l~G~f~~~~~S~P~-~~~~~~~A~~G~vl~A~Y~L~~~~r~~fG~~~P~~~~~~~~ 477 (532)
T TIGR01972 399 FFMLFAMASLGLPGTSGFVGEFLILLGAFKSDILSFPV-NPVVAFLAALGIVLTAAYMLWLYKRVFFGERKPDSLYLQDK 477 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999997332000034999999998541677667551-89999999999999999999999998517987853121022
Q ss_pred CCC---C----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 877---8----6556733218999999999999999767658999998751
Q gi|254780867|r 434 STE---C----VVVVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 434 ~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 477 (478)
.++ + .+|.+.++.....+..+.++.+++||+++.++..+.++++
T Consensus 478 ~~~~~~~~~~~~~Dl~~rE~~~~~~lv~~~~~lGlyP~~~l~~~~~~v~~l 528 (532)
T TIGR01972 478 ISNISDPEVAEFPDLNGREIAVLAPLVVLILFLGLYPKPLLDLIEPSVNNL 528 (532)
T ss_pred CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 002543134323675088999999999999999724568875578899999
No 22
>MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=587.54 Aligned_cols=443 Identities=36% Similarity=0.627 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998640230158999999999999999999971322100316764100799999999999999
Q gi|254780867|r 10 LRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSII 89 (478)
Q Consensus 10 l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~ 89 (478)
+.++.||+.+..+++.+++.+.+.+++++........ .+............+...+++.+..|+++...+.++...+..
T Consensus 2 ~l~l~PEi~l~~~~~~ll~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~k~~~~~~~~~ 80 (454)
T MTH00199 2 MLILYPEVLLSLVVLSLVIYGVNLSTLKKSVLVLLIV-GLIISFNRQGLFNKVLDGTNGLLLINGWVLISKLIIIIGSIS 80 (454)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2146049999999999999998323202999999999-999999999834452002375134748999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
Q ss_conf 99999999632100224206679999999999873146102212457778877776653200013445555540146204
Q gi|254780867|r 90 IFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFS 169 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g 169 (478)
..... +++++.||+.+.++...|+++++.|+|++++|++||++++++|.|++++|+++++.||++||++++.++
T Consensus 81 ~~~~~------~~~~~~e~~~l~L~~~~Gm~~~vss~dli~lfl~lEl~sl~~Y~L~~~~r~~~~s~eAalKYfilg~~~ 154 (454)
T MTH00199 81 ILLMG------LKESLFSVPVLILIVALGSLLLVSSINWLSIYLALELQTLSLFILVALKRDSAYSTEAGLKYFVLGAVS 154 (454)
T ss_pred HHHHH------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99984------665626899999999999999998626999999999999999999983689855899999999998788
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 67998898853001000001222211101343100001222211234444432110001210122100123333210000
Q gi|254780867|r 170 SAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPK 249 (478)
Q Consensus 170 ~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~ 249 (478)
+.+++.|+.++|..|||+|++++.....+. .+..++++|+++|.|++|||.|+||+||+||+|++++++.++|
T Consensus 155 s~~lL~Gi~liY~~tGs~~~~~i~~~~~~~-------~g~~li~~gl~fK~a~~PfH~W~PDvYegaPt~vta~la~~~K 227 (454)
T MTH00199 155 SGLFLFGCALLYGLTGETSIQGINSLLSGD-------VGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPK 227 (454)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999999999995780499999988645-------7899999999999966323154157757997899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHH
Q ss_conf 023211111244000112221000001222102222000001244544356421112442111111215-7788886430
Q gi|254780867|r 250 FATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYM 328 (478)
Q Consensus 250 ~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~ 328 (478)
.+++..+.|+... ..++.+++++|+++|++.|++|+|+||++|||||+|+||+++|++.++ .+..+.++|.
T Consensus 228 ia~~~~l~~~~~~--------~~il~~~~~lSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyil~gl~~~~~~g~~~~l~y~ 299 (454)
T MTH00199 228 IGVFSILVQIGPV--------TNVVLWCAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYM 299 (454)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999998889--------99999999999999999998214367999999998999999999975457899999999
Q ss_pred CCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 02320100110000267874087645502104665232114789999865303665000067599999999962849999
Q gi|254780867|r 329 VIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLA 408 (478)
Q Consensus 329 ~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~ 408 (478)
+.|.+.+.++|.++....++ +++++|++|+.|++|.++.++.++.+|++|+||++||++||++++++++++.++++
T Consensus 300 ~~y~~~~~~~F~~i~~~~~~----~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~K~~i~~a~i~~g~~~la 375 (454)
T MTH00199 300 IIYVIMSICSFSIILSLKLR----RGLIVELSGLSRKNPVMALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLIC 375 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999999999827----52699987487548999999999999983974120299999999999986959999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999999649987786---------5567332189999999999999997676589999987519
Q gi|254780867|r 409 IVALLSSVISAYYYLRVISIMWFDQSTECV---------VVVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 409 ~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
++.+++|+++++||+|+++.+|++++++.. ++.+.++...+......+.+++++|+++.+...+.+.++|
T Consensus 376 ii~vl~Svis~~YYlRiik~myF~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~ilf~~i~P~~ll~~~~~~a~~L~ 454 (454)
T MTH00199 376 IVAVISSVIAGVYYVRVVQIIYFQADSPLLIWQKVLNREERLDLSKSILIGMTLFFILFLMISPNFLLQITHDATIGLY 454 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999995089962023100000013554678999999999999988080999999999976449
No 23
>PRK12648 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=587.56 Aligned_cols=457 Identities=19% Similarity=0.271 Sum_probs=364.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCC----------CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999864023015899999999999999999997-132----------210031676410079999999
Q gi|254780867|r 14 IPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI-MPY----------EGIGLGGAYISDRFSYFIKAI 82 (478)
Q Consensus 14 lP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~-~~~----------~~~~~~~~~~~D~~s~~~~~l 82 (478)
+..+++.++++......+..++.............+......... .++ +..+.+..+..|.+|..+..+
T Consensus 5 llvllP~igA~l~~ll~r~~r~~~~~~a~l~~l~~~~~~~~l~~~v~~g~~~~~~~~WiP~lgi~l~~~lDgLs~lf~lL 84 (950)
T PRK12648 5 LLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVLLALLYPAVAAGEVIRQSIEWLPALGLNLSLRLDGLAWLFALL 84 (950)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHH
T ss_conf 99999999999999987304438999999999999999999999860798289974335666865888532879999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999963210022420667999999999987314610221245777887777665320001344555554
Q gi|254780867|r 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKY 162 (478)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky 162 (478)
+...+..+.+|+..|+.+++ +..+||.+++++..+|++++.|+|++++|+|||++++++|.||++|++++++.+++.||
T Consensus 85 v~~ig~lv~lYs~~Ym~~~~-~~~rFy~~lllf~~amlGvvla~DL~~lfVFwEltsl~SylLIg~~~~~~~ar~aA~~a 163 (950)
T PRK12648 85 ILGIGLLVVLYARYYLSPAD-PVPRFFAFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMA 163 (950)
T ss_pred HHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999999999678648998-80479999999999999999980799999999999999999997428988999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 01462046799889885300100000122221110134310000122221123444443211000121012210012333
Q gi|254780867|r 163 FVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTA 242 (478)
Q Consensus 163 ~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sa 242 (478)
++++..|+..++.|+.++|..+||+|++++.+.......++....+..+++.|++.|+|+||||+|+||+|+ ||||+||
T Consensus 164 l~vt~~Ggl~lL~Gi~ll~~~~Gt~~ls~i~~~~~~~~~~~l~~~a~~Lil~Ga~~KsA~fPfH~WLPdAma-APTPVSA 242 (950)
T PRK12648 164 LTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMA-APTPVSA 242 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC-CCCHHHH
T ss_conf 999999999999999999999787509999841100235728999999999999998441654655444535-8856989
Q ss_pred CCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HH
Q ss_conf 321-0000023211111244000112221000001222102222000001244544356421112442111111215-77
Q gi|254780867|r 243 FLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LG 320 (478)
Q Consensus 243 lls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~ 320 (478)
++| +.++|+|+|.+.|+.+.+. ..+.+...+..+|++|+++|++.|++|+|+||++|||||+|+|||+++++.++ .+
T Consensus 243 ~LhSa~mVKaGvyll~Rl~p~l~-~~~~w~~~l~~lG~iT~l~Ga~~Al~Q~DlKrlLAYSTVSqlG~i~~~iGlgt~~a 321 (950)
T PRK12648 243 YLHSATMVKAGVFLLARLWPVLA-GTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLA 321 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999999999998862-34999999999999999999999995004999999999999999999997366889
Q ss_pred HHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88886430023201001100002678740876455021046652321147899998653036650000675999999999
Q gi|254780867|r 321 IVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAV 400 (478)
Q Consensus 321 ~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~ 400 (478)
..++++|+++|++.|.++|+++|.+.+++| +||++|+||++|+||+++.++.++.+|++|+||++||+||+.++++..
T Consensus 322 ~~aal~hli~Hal~Ka~LFl~aG~I~~~tG--trdl~~LgGL~r~mP~ta~~~~iaalSmaGiPp~~GF~sKe~~~~a~~ 399 (950)
T PRK12648 322 AVAAIFHIINHATFKASLFMAAGIIDHETG--TRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETL 399 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999999999999999869999808--700987199142128999999999999842552037999999999998
Q ss_pred HCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 6284-----999999999999999999999999964998778655673321----899999999999999976765899-
Q gi|254780867|r 401 KREF-----YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMR----LFIFGSILFVTGYFLIENILNSSI- 470 (478)
Q Consensus 401 ~~~~-----~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 470 (478)
+.+. +....+..+++++++.|..|+....|+++++++.++.++|.+ .........++.++++|+...+++
T Consensus 400 ~~~~~~~~~~~~~~~a~~~s~lt~aYs~r~~~~~F~g~~~~~~~~~~he~p~~m~~p~~iLa~~~l~~G~~p~~~~~~~~ 479 (950)
T PRK12648 400 ETHLLGSLDWLLPVAATLAGIFSVAYSLRFIHDVFFGPPPDDLPKTPHEPPRWMRAPVELLVLLCLVVGIFPALTVGPLL 479 (950)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 65564219999999999999999999999999704699998778788999704766699999999998606142246679
Q ss_pred HHHHH
Q ss_conf 99987
Q gi|254780867|r 471 MKIVM 475 (478)
Q Consensus 471 ~~~~~ 475 (478)
.+.++
T Consensus 480 ~~a~~ 484 (950)
T PRK12648 480 AAAAR 484 (950)
T ss_pred HHHHH
T ss_conf 99998
No 24
>PRK06458 hydrogenase 4 subunit F; Validated
Probab=100.00 E-value=0 Score=587.30 Aligned_cols=424 Identities=21% Similarity=0.282 Sum_probs=361.5
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999997132210031676410079999999999999999999999632100-------22420667999999999987
Q gi|254780867|r 51 IALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-------SCFEFPVIMLMAVLGMLCMI 123 (478)
Q Consensus 51 i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-------~~~~f~~l~l~~~~g~~~~~ 123 (478)
+........+.+....+..+.+|+++..+..+....+..+.+++..|+.++++ +.++|+.+++++..|+++++
T Consensus 46 l~~~~~~~~~~~~~~~~~~~~~D~ls~~~~~l~~~i~~~~~lys~~y~~~~~~~~~~~~~~~~~y~~l~ll~~~g~~g~~ 125 (491)
T PRK06458 46 LWLVQTVVDAGEIFAAGLWFHVDDLNVLFLALTGFVGFLTSLYSIGYMRHEVEHGELSPVRLRLYYGMYQLFLFTMLLAL 125 (491)
T ss_pred HHHHHHHCCCCCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999982578600024034451767999999999999999998899864031033342147699999999999999999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-------
Q ss_conf 3146102212457778877776653200013445555540146204679988988530010000012222111-------
Q gi|254780867|r 124 SANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSL------- 196 (478)
Q Consensus 124 ~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~------- 196 (478)
.|+|++++|++||++++++|.||+++++ +++.||++||++++.+|+.++++|+.++|..+||.+.++.....
T Consensus 126 ~s~dl~~~~vf~El~~i~sy~Li~~~~~-~~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~~gtl~~~~~~~~~~~~~~~~ 204 (491)
T PRK06458 126 TSNNLGLMWVAIEATTLSSVLLVGIYRT-RASLEAAWKYFILCSVGIAFALFGTILVYAAAATVMGDGEDAMLWTVLLAV 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9818999999999999999999996796-899999999999999999999999999999999886205788888889876
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC--CCCCCCEE
Q ss_conf 0134310000122221123444443211000121012210012333321000002321111124400011--22210000
Q gi|254780867|r 197 FIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM--LSGLLPIF 274 (478)
Q Consensus 197 ~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~--~~~~~~~l 274 (478)
....++....++..+++.|+++|+|+||||.|+||+|++||+|+|+++|++.+|+|.|+++|+.....+. ...+...+
T Consensus 205 ~~~~~~~~~~l~~~l~l~g~~~K~a~~PfH~WlPday~~aPt~vSalls~v~~k~g~y~llr~~~~~~~~~~~~~~~~~l 284 (491)
T PRK06458 205 ASLLDPTLMSLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSAVLSGVLLNVALYALLRYYIIIDAAIGSDFPGRLL 284 (491)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 32245379999999999999988562526688505756088438999999999999999999999861202579999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCC
Q ss_conf 0122210222200000124454435642111244211111121-577888864300232010011000026787408764
Q gi|254780867|r 275 MCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNI 353 (478)
Q Consensus 275 ~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~ 353 (478)
.++|++|+++|++.|++|+|+||++|||||+|+||+++|++.+ +.+..++++|+++|++.|.++|.++|.+++++| +
T Consensus 285 ~~lg~lsii~g~l~Al~Q~dlKrlLAYSsIsq~G~i~~gi~~~~~~~~~~al~~~i~h~l~k~~LFl~~g~i~~~~g--~ 362 (491)
T PRK06458 285 LIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLITFAFGIGGPLGNFAALLHMLNHSLTKSAIFFASGNVLQKYG--T 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--C
T ss_conf 99999999999999999837668999999999999999999588789999999999999999899999999999859--8
Q ss_pred CCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 55021046652321147899998653036650000675999999999628499999999999999999999999996499
Q gi|254780867|r 354 QNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQ 433 (478)
Q Consensus 354 ~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~ 433 (478)
||++|+||+.|++|.++.++.++.+|++|+||++||+|||++++++++++.++++++..+++++++.||.|.++.+|+++
T Consensus 363 ~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~GF~~K~~i~~~~~~~~~~~l~~~~~~~s~l~~~y~~~~~~~~~fg~ 442 (491)
T PRK06458 363 QDINVIRGLLKVMPFTGWGLMLGVLAIAGMPPFGVFISEFLILTAGLARGHPWLAILLLLLLTLAFAALVRRVTGMVFGE 442 (491)
T ss_pred EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 06998719798839999999999999998879978999999999999818799999999999999999999999984189
Q ss_pred CCCCCCC--CCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHC
Q ss_conf 8778655--6733218999999999999999-767658999998751
Q gi|254780867|r 434 STECVVV--VAKEMRLFIFGSILFVTGYFLI-ENILNSSIMKIVMSL 477 (478)
Q Consensus 434 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 477 (478)
|+++.+. .+..+...+......++.++++ |.++.++.++++..+
T Consensus 443 ~~~~~~~~~~~~~~~~~~~il~~~~i~~Gl~~p~pl~~~~~~~a~~~ 489 (491)
T PRK06458 443 PPQAVNRGDLGWLTLLPMFIHLVLMLVLGLYLPPPLVRWLQHAATIV 489 (491)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99766889997879999999999999999727489999999999984
No 25
>PRK08667 hydrogenase membrane subunit; Validated
Probab=100.00 E-value=0 Score=587.32 Aligned_cols=458 Identities=19% Similarity=0.275 Sum_probs=365.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHH
Q ss_conf 86299999999999999999998640230158999999999999999999971---------322100316764100799
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIM---------PYEGIGLGGAYISDRFSY 77 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~---------~~~~~~~~~~~~~D~~s~ 77 (478)
|+++ ++.+.++++++++..+..++.+.+.+...........+.......... ..+....+..+.+|++|.
T Consensus 2 m~~l-~l~~i~lpl~ga~l~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vD~LS~ 80 (644)
T PRK08667 2 LAGL-FLGAILLLLAAAVIPLVFRHKNIRVWQSSLLLLIASALLLLFALLVLFTGNPLDIPLWGIAPGLDITFHIDRLAA 80 (644)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECHHHH
T ss_conf 5789-999999999999999982587510699999999999999999999995489838986420699628988556689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 999999999999999999996321002--242066799999999998731461022124577788777766532000134
Q gi|254780867|r 78 FIKAILLMSSIIIFIKMFSCIYVKPFS--CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFS 155 (478)
Q Consensus 78 ~~~~l~~~~~l~~~~~~~~~~~~~~~~--~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~ 155 (478)
++..++...+..+.+|+.+|+++++.+ .++|+.++.++..+|++++.|+|++++|++||++++++|.||.++++++++
T Consensus 81 ~fl~lv~~v~~~v~lYs~~Y~~~~~~~~r~~~~~~~~~Lf~~sm~~vv~a~dl~~~~vfwE~m~l~sy~LI~~~~~~~~~ 160 (644)
T PRK08667 81 FFIILIGLVSLCVAIYSLGYNEHMKSNERANLLSALTALFILSMLLVVASANTISFLVFWEIMALSSFFLVMNDYQEEET 160 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99999999999999996288662768631419999999999999999998379999999999999999998400998999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 45555540146204679988988530010000012222111013431000012222112344444321100012101221
Q gi|254780867|r 156 IEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 156 ~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
.+|++||++++++|+.+++.|+.++|..+||+|+++...... ...+.+.++++|++.|+|++|||.|+||||++
T Consensus 161 ~~Aa~ky~i~~~~G~~~ll~g~~~l~~~~Gs~~~~~~~~~~~------~~~l~~~llliGf~~Kag~~P~H~WLP~A~~~ 234 (644)
T PRK08667 161 QRAGFFYFVMTQLSTVFLMLGIILLFIQTGSFELSPLGAPSG------SLPLVFLLLFLGFGIKAGIIPFHKWLPYAHPA 234 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
T ss_conf 999999999999999999999999999976188999886421------48999999999999988050269760666678
Q ss_pred HCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00123333210000023211111244000112221000001222102222000001244544356421112442111111
Q gi|254780867|r 236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFS 315 (478)
Q Consensus 236 ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~ 315 (478)
||+|+||++|++++|+|+|+++|+.....+....+...+.++|++|+++|++.|+.|+|+||++|||||+|+|||++|++
T Consensus 235 APtpVSALlsgvmvk~gvy~liR~~~~~~~~~~~~~~~ll~lG~iT~l~G~l~Al~Q~DiKrlLAYSSisqiG~i~lglG 314 (644)
T PRK08667 235 SPSPVSALMSGVMLKVAVYGLIRFLMDVLAPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIG 314 (644)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98089999999999999999999999851405899999999999999999999997621899999999999999999998
Q ss_pred CH------------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 21------------577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 316 TG------------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 316 ~~------------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
.+ ..++.++++|+++|++.|..+|+++|.+.+++| +||++|+||+.|+||.++.++.++.+|++|+
T Consensus 315 ~~~~~~~~g~~~l~~la~~~al~hl~nHa~fKalLFl~aG~v~~~tg--t~~i~~lgGL~k~mP~t~~~f~ig~lai~Gl 392 (644)
T PRK08667 315 LYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATG--TRNIEKMGGLVKRMPYTSALFLVGAVSIAAL 392 (644)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 74310113511567889999999999999999999999879999718--7029996894432189999999999998737
Q ss_pred CHHHHHHHHHHHHHHHHHCCH---HH-------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 500006759999999996284---99-------99999999999999999999999649987786556733218999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREF---YV-------LAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSI 453 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~---~~-------~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 453 (478)
||++||+|||+++++.+++.. +. ......+.+.+++.|+.|.+...|+|+|+++..+..+|.+..+....
T Consensus 393 PP~~GF~Sk~li~~~~~~~~~~~~~~~~~~~~~~~~~lal~~~la~~~~~k~~g~~Flg~pr~~~~~~a~e~~~~m~~~~ 472 (644)
T PRK08667 393 PPFNGFASELLLYESFFQSFSVADPLIKILLFVVLALFALTSALAAACFVKAFGITFLAMPRSQEARSAREVSKPMLIGP 472 (644)
T ss_pred CHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 20047999999999998545654237999999999999999999999999999986138889854346677981278999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999976765899999
Q gi|254780867|r 454 LFVTGYFLIENILNSSIMKI 473 (478)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~ 473 (478)
...+..|+..++.+..+.+.
T Consensus 473 ~~la~~~~~~g~~~~~~~~~ 492 (644)
T PRK08667 473 AVLAVACLVLGLFSVQIFSL 492 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999646889986
No 26
>PRK12666 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=586.63 Aligned_cols=466 Identities=19% Similarity=0.277 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------HHHHHHHHHHH
Q ss_conf 77862999999999999999999986402301589999999999999999999713221----------00316764100
Q gi|254780867|r 5 SFINDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG----------IGLGGAYISDR 74 (478)
Q Consensus 5 ~~~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~----------~~~~~~~~~D~ 74 (478)
+.||++ +++|.+++.++++..+..++.+++.++..........+.+..........++ ..++..+..|.
T Consensus 1 ~~M~~L-~~l~IliPl~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~g~W~~~fGI~l~vD~ 79 (509)
T PRK12666 1 DWMNHL-IILPILLPLLAAALLLLLDERRRRLKRAISLASTLLLLAVAVALLARAADGQIGVYLLGNWPAPFGIVLVLDR 79 (509)
T ss_pred CHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECH
T ss_conf 977789-9999999999999999971632779999999999999999999999974788349973477777670678747
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 79999999999999999999999632100224206679999999999873146102212457778877776653200013
Q gi|254780867|r 75 FSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVF 154 (478)
Q Consensus 75 ~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~ 154 (478)
+|..+..+..+.+..+.+++.. .++++.++|+.++++...|+++++.++|++++|++||++++++|.||.++ ++++
T Consensus 80 ls~~~~ll~~~v~~~~~~ys~~---~~~~~~~~f~~l~ll~~~g~~G~~lt~Dlf~lfvf~E~~~i~sy~Li~~~-~~~~ 155 (509)
T PRK12666 80 LSALMLLLTALLALAALLYALA---GWDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHG-SGRA 155 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHH
T ss_conf 6699999999999999999752---23441037999999999999999999689999999999999999999984-9888
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 44555554014620467998898853001000001222211101343--1000012222112344444321100012101
Q gi|254780867|r 155 SIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR--SFVLIVGVVLILVGLFFKMALVPFHMWIPDV 232 (478)
Q Consensus 155 ~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a 232 (478)
+.||++||++++.+|+.++++|+.++|..+||+|++|+.+...+.+. ......+..++++|+++|+|+||||.|+||+
T Consensus 156 ~~~Aa~kY~i~~~~gs~~~L~gi~~ly~~tGtl~~~~l~~~~~~~~~~~~~l~~~~~~ll~~gf~~K~a~fPfH~WLPda 235 (509)
T PRK12666 156 RVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAGAALLLVVFLLKAAMWPLNFWLPPA 235 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999999999999999998388649999999752574101799999999999999998571210100201
Q ss_pred HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-----CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 221001233332100000232111112440001122-----210000012221022220000012445443564211124
Q gi|254780867|r 233 YEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS-----GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 233 ~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~-----~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
|++||+|+|++++ ++.|+|.|.++|+....++... ....++.++|++|+++|++.|++|+|+||++|||||+|+
T Consensus 236 y~~aPtpvsalla-~~~K~Gvy~l~R~~~~~f~~~~~~~~~~~~~~l~~l~~~t~i~G~~~Al~Q~dlKrlLAYSsIsq~ 314 (509)
T PRK12666 236 YAAASAPVAALFA-IMTKVGIYAILRVSTLVFGPEAGASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSS 314 (509)
T ss_pred CCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 1689849999999-999999999999999981421667778999999999999999999999972769899999999999
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 42111111215-77888864300232010011000026787408764550210466523211478999986530366500
Q gi|254780867|r 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPF 386 (478)
Q Consensus 308 G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~ 386 (478)
|||++|++.++ .+..++++|+++|++.|.++|+++|.+++++++ .+|++++||+.|++|.++.++.++.+|++|+||+
T Consensus 315 Gyillgl~~~~~~~~~gal~~l~~h~~~k~~LFl~aG~i~~~~~~-~~~~~~~ggl~~~~p~~a~~f~i~~lsl~GiPp~ 393 (509)
T PRK12666 315 GTLLAAIGLGTPAATAAALYYLVHSTLAAAALFLLADLVERQRGD-AADRLAVTPELYGPDLLGLLFFICAIALAGLPPL 393 (509)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999996659999999999999999999999999999966883-8779870798444739999999999998178752
Q ss_pred HHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 00675999999999628-4999999999999999999999999964998778655-673321899999999999999976
Q gi|254780867|r 387 AGFFGKYFLLISAVKRE-FYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV-VAKEMRLFIFGSILFVTGYFLIEN 464 (478)
Q Consensus 387 ~GF~sK~~i~~~~~~~~-~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 464 (478)
+||+|||++++++++++ .++.....+++++.+.+|+.|..+..|+++++++..+ .+..+.....+...+++..+++|+
T Consensus 394 ~GF~sK~~i~~aa~~~~~~~~~~a~~l~~~l~tl~~~~r~~~~~Fw~~~~~~~~~~~~~~~~~~~~~L~~~~v~~G~~~~ 473 (509)
T PRK12666 394 SGFLGKFALLQALLNPPGAGWLWALVLLSGLAALIALTRAGIRLFWRASHERPVPRLRVLEVAPIALLLALCVALTVFAG 473 (509)
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40889999999986244469999999999999999999999998178998767788768789999999999999998089
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 7658999998751
Q gi|254780867|r 465 ILNSSIMKIVMSL 477 (478)
Q Consensus 465 ~~~~~~~~~~~~l 477 (478)
++.+..++.++++
T Consensus 474 ~~~~~~~~aa~~l 486 (509)
T PRK12666 474 PVMRYTQATAAQL 486 (509)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999987
No 27
>PRK12665 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=582.64 Aligned_cols=464 Identities=22% Similarity=0.366 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCC--------CHHHHHHHHHHHHH
Q ss_conf 86299999999999999999998640230158999999999999999999971--322--------10031676410079
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIM--PYE--------GIGLGGAYISDRFS 76 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~--~~~--------~~~~~~~~~~D~~s 76 (478)
||++ +.+|.+++.+++...+..++..+.++....... ...+.......... ... ...++..+..|.+|
T Consensus 1 M~~L-l~l~vliPll~a~l~l~~~~~~~~~r~i~l~~~-~~~l~~~~~ll~~~~~~g~~~~~~g~w~~p~GI~l~~D~ls 78 (524)
T PRK12665 1 MSVL-VPLPVLLPLLAAALTLILGRRPRLQRAISVLVL-AAVLALSAVLLYLVDRDGTLAVQVGGWAAPIGITLVVDRLS 78 (524)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHH
T ss_conf 9718-999999999999999997477007999999999-99999999999998279847998754777743288876766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 9999999999999999999996321002---2420667999999999987314610221245777887777665320001
Q gi|254780867|r 77 YFIKAILLMSSIIIFIKMFSCIYVKPFS---CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSV 153 (478)
Q Consensus 77 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~---~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~ 153 (478)
..+..+..+....+.+|+..+.+.++++ .++|+.++++...|+++.+.++|++++|+|||++++++|.|++++++ +
T Consensus 79 ~lmlll~~~v~l~~~iys~~~~~~~~~~~~~~~~F~~l~lll~~g~~g~flt~DLfnlfVf~Ev~~i~sy~Li~~~~~-~ 157 (524)
T PRK12665 79 ALMLVVSSIVLLAVLVYAIGQGIRDGDEEQPVSIFHPTYLILSAGVSNAFLAGDLFNLYVGFEVLLVASYVLLTLGAT-A 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-H
T ss_conf 999999999999999997635442656331178999999999999999999837999999999999999999995798-8
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34455555401462046799889885300100000122221110134310000122221123444443211000121012
Q gi|254780867|r 154 FSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVY 233 (478)
Q Consensus 154 ~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~ 233 (478)
++.||++||++++.+|+.++++|+.++|..+||+|++|+.....+.+... ......++++|+++|+|+||+|.|+||+|
T Consensus 158 ~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~tGtln~~~l~~~~~~~~~~~-~~~~~~lll~~f~~Kaa~fPlH~WLP~ay 236 (524)
T PRK12665 158 ARIRAGVTYVMVSMVSSLLFLIGIAMVYAATGTLNMADLAVRLDDLPEGT-RMALFAVLLVAFGIKAAVFPLSFWLPDSY 236 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999999999999999999999999999808877999999874088138-99999999999999982712097875164
Q ss_pred HHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21001233332100000232111112440001122210000012221022220000012445443564211124421111
Q gi|254780867|r 234 EGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG 313 (478)
Q Consensus 234 ~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~ 313 (478)
+++|+|+||+++++++|+|+|.++|+.....+. +..+.++.++|++|+++|++.|+.|+|+||++|||||+|+||+++|
T Consensus 237 ~~apt~vsAllag~~~KvGvy~liR~~~~~f~~-~~~~~~l~~lg~~t~~~g~l~Al~q~dlKrllAYssisq~G~il~g 315 (524)
T PRK12665 237 PTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG-GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFG 315 (524)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 009845789999999999999999999983454-8999999999999999999999864117699999999999999999
Q ss_pred CCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 11215-77888864300232010011000026787408764550210466523211478999986530366500006759
Q gi|254780867|r 314 FSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGK 392 (478)
Q Consensus 314 l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK 392 (478)
++.++ .++.++++|+++|++.|.++|+++|.+++++| ++|++++||+.|++|+++.++.++.+|++|+||++||+||
T Consensus 316 i~~~~~~g~~gal~~l~~h~l~k~~LFl~aG~i~~~~g--~~~l~~lgGl~~~~P~~a~~f~i~alsl~GlPp~sGF~~K 393 (524)
T PRK12665 316 IALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAG--SSSLRRLGGLAAASPLLAVLFFVPALNLGGIPPFSGFIGK 393 (524)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99663999999999999999999999999999998548--5859986695865199999999999999866565259999
Q ss_pred HHHHHHHHHCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--------------------------CC
Q ss_conf 99999999628499---99999999999999999999999649987786556--------------------------73
Q gi|254780867|r 393 YFLLISAVKREFYV---LAIVALLSSVISAYYYLRVISIMWFDQSTECVVVV--------------------------AK 443 (478)
Q Consensus 393 ~~i~~~~~~~~~~~---~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~--------------------------~~ 443 (478)
++++++..+++.++ +..+.++++.++.+|+.|.....|+|++++..++. .+
T Consensus 394 ~~i~~aa~~~~~~~~~~~~~~~l~~s~~tl~~~~r~~~~~Fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (524)
T PRK12665 394 VALLEAGAADGTWLAWALVAGGVATSLLTLYAVARVWNKAFWRSREDAPEGALALAAPAALLDDTDESDDIAFKDRVDVG 473 (524)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999998639828999999999999999999999999986599987777542233544333443333443110123323
Q ss_pred C----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3----218999999999999999767658999998751
Q gi|254780867|r 444 E----MRLFIFGSILFVTGYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 444 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 477 (478)
+ +...........+..+++++++.+..+++++++
T Consensus 474 ~~~~~~~~p~~~L~~~~~~~g~~~~pl~~~~~~aA~~L 511 (524)
T PRK12665 474 RMPRGMVGATAGLVAVGLALTVFAGPLFAISDRAAEEL 511 (524)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45377999999999999999983999999999999985
No 28
>PRK07390 NAD(P)H-quinone oxidoreductase subunit F; Validated
Probab=100.00 E-value=0 Score=580.90 Aligned_cols=454 Identities=17% Similarity=0.182 Sum_probs=361.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHH-HHHHHHHHHHHH-HCCCC------------HHH
Q ss_conf 77786299999999999999999998640230---15899999999-999999999997-13221------------003
Q gi|254780867|r 4 VSFINDLRLCIPEIIIAFGILFLLLMGVFSRR---KNAFHLVVFPV-CLLSIALFFLLI-MPYEG------------IGL 66 (478)
Q Consensus 4 ~~~~~~l~lllP~i~l~~~~l~~l~~~~~~~~---~~~~~~~~~~~-~~l~i~l~~~~~-~~~~~------------~~~ 66 (478)
..++-+..+++|.+.+..+.+..+......+| +.......... ............ .+.+. .+.
T Consensus 2 ~~~~~~~aWLIp~~Pl~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (615)
T PRK07390 2 LQFLLQTSWLIPLYGLIGALLSLPWSPGIIRRTGPRPAAYLNLLMTLLAFLHSLLALRAVWNQPPQQLSFPWLQVADLDL 81 (615)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEE
T ss_conf 48899999999999899999987765233322573089999999999999999999999708983899999788888827
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 16764100799999999999999999999996321002242066799999999998731461022124577788777766
Q gi|254780867|r 67 GGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLI 146 (478)
Q Consensus 67 ~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI 146 (478)
+..+.+|+++..+..++...+.++.+|+.+|+++++ +..||+.++.++..+|++++.|+|++++|++||.++++||.||
T Consensus 82 ~~~~~~D~Ls~~m~~vvt~v~~li~iYS~gYm~~d~-~~~rf~~~l~lF~~~Ml~lv~a~nl~~~f~~WE~vgl~SylLI 160 (615)
T PRK07390 82 SLSLEISPVTLGALELITGLSLLAQIYALGYLEKDW-GLARFFALLGFFEAAMSGLALSDSLFFSYVLLEMLTLSTYLLV 160 (615)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 985435478999999999999999998488557998-8404999999999999999995619999999999999999999
Q ss_pred HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5320001344555554014620467998898853001000001222211101343-100001222211234444432110
Q gi|254780867|r 147 AMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR-SFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 147 ~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~-~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
++|.+|+++.+|+.|+++++++||..+++|+..+|..+||+|++++.+....... +........++++|...|+||+|+
T Consensus 161 gfw~~~~~~~~aa~kafi~~rvGd~~~l~gi~~l~~~~Gt~~~~~l~~~~~~~~~~~~~~~~~~l~l~~G~~~KsAq~Pl 240 (615)
T PRK07390 161 GFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGSWNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPL 240 (615)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 68659889999999999999488999999999999997888899999998607788589999999999998765230757
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00121012210012333321000002321111124400011222100000122210222200000124454435642111
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~ 305 (478)
|.||||||| +|||+|+++|+.++++|+|.+.|..+.+. ..+....++.++|.+|+++|+..|+.|+|+||++||||+|
T Consensus 241 h~WLPdAM~-gPTPvSaL~~A~mV~aGvyl~~R~~p~~~-~~~~~~~~i~~iG~~T~~~aa~~Al~Q~DiKrvLAYSTiS 318 (615)
T PRK07390 241 HLWLDEAME-GPNPASILRNSVVVATGAWVLIKLQPVLA-LSPVALTVLIAIGTVTAIGASLVAIAQIDIKRALSYSTSA 318 (615)
T ss_pred CCCCHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCCCHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 434456525-89859999999999999999999753120-2789999999999999999999998563164887612898
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
Q ss_conf 24421111112157788886430023201001100002678740876455021046652321147899998653036650
Q gi|254780867|r 306 HAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPP 385 (478)
Q Consensus 306 q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp 385 (478)
|+|||.++++.+. ..++++|.++|++.|.++|+++|.+.++. ++||++|+||++|+||.++.++.++.++++|+||
T Consensus 319 QlGym~~a~g~g~--~~~a~fhl~~HA~fKalLFl~aGsvi~~~--~~~di~~mgGL~~~mP~t~~~f~ig~lal~GiPp 394 (615)
T PRK07390 319 YLGLVFIAVGLGQ--PDIALLLLLTHAIAKALLFMSVGSVILTT--ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394 (615)
T ss_pred HHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999862671--99999999999999888886489999974--0868998679602347999999999999840550
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00067599999999962849999999999999999999999999649987786556733218999999999999999767
Q gi|254780867|r 386 FAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENI 465 (478)
Q Consensus 386 ~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (478)
++||+||+.++++.++.+ +++..+.++++.+|++|..|.+...|+||++++.++.+|.+..+..+..++.+.....|..
T Consensus 395 ~~GF~SKd~il~~~~~~~-~~l~~i~l~~a~lTafYm~Rl~~l~F~G~~~~~~~~~~Esp~~M~iPLviLA~~si~~g~~ 473 (615)
T PRK07390 395 LGGFWALLRLADGLWAVS-PWLVGVLLLVNALTAFNLTRVFRLVFLGKPQQKTRRSPEVLWPMALPMVSLAGLTLHLPLL 473 (615)
T ss_pred HHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 317989999999986534-1999999999999999999999975079998546778984258899999999999999898
No 29
>PRK06277 hydrogenase subunit F; Validated
Probab=100.00 E-value=0 Score=578.32 Aligned_cols=403 Identities=23% Similarity=0.376 Sum_probs=344.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 16764100799999999999999999999996321002242066799999999998731461022124577788777766
Q gi|254780867|r 67 GGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLI 146 (478)
Q Consensus 67 ~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI 146 (478)
+..+..|..+..+.......+. +....++. +++++++|+.++++...|+++++.|+|++++|++||++++++|.|+
T Consensus 65 ~i~~~~d~l~~~~~~~~~l~~~---l~~~~~~~-~~~~~~~f~~l~l~~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li 140 (479)
T PRK06277 65 GITYLYGPAKQLIITVLMLIAS---LVLITGLG-EKKSSGLYVALMLMGLASVSAIVLADDIFNIYVFFEIAAIAQVGLV 140 (479)
T ss_pred CCEEEECHHHHHHHHHHHHHHH---HHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7010453066999999999999---99999951-0346788999999999999999999789999999999999999999
Q ss_pred HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 53200013445555540146204679988988530010000012222111013431000012222112344444321100
Q gi|254780867|r 147 AMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFH 226 (478)
Q Consensus 147 ~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH 226 (478)
++++++ ++.||+.||++++.+|+.++++|+.++|..+||+|++|+.....+.+.+.....+..+++.|+++|++++|||
T Consensus 141 ~~~~~~-~~~~aa~ky~i~~~~gs~~~L~gi~~ly~~tgs~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~l~PfH 219 (479)
T PRK06277 141 IASGTE-KAYRTALKYMILGNVAGSILLLGIAFLLAATGTLNISDMHNFLLNNPTTPTIYGGLLMLIIGLLYGSGLPPFH 219 (479)
T ss_pred HHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 977989-9999999999999999999999999999996795799999998719640899999999999999998742342
Q ss_pred HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC--CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0121012210012333321000002321111124400011--22210000012221022220000012445443564211
Q gi|254780867|r 227 MWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM--LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 227 ~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~--~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
.|+||+|+++|+++|+++|+..|+..++.+++........ .+.+..++.++|++|+++|++.|++|+|+||++|||||
T Consensus 220 ~Wlpday~~ap~~~salLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~tii~g~l~Al~Q~dlKrllAYSSI 299 (479)
T PRK06277 220 TVKADIYAKAKPFGSALLQTYSKFVLVALMLVIFKLFGGLSYFASAQGVLIALSVLAMVFGVVMALLQTDYKKLLAYHAI 299 (479)
T ss_pred HCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 14033407686799999999999999999999999702244468999999999999999999999971246888888789
Q ss_pred CCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 12442111111215-77888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
+|+||+++|++.++ .+..++++|+++|++.|.++|. .+.+.++++ +||++|+||+.|+||.++.++.++.+|++|+
T Consensus 300 s~~Gyi~lgi~~~~~~~~~gai~~~i~h~~~k~~LFl-~g~i~~~~~--~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~Gi 376 (479)
T PRK06277 300 SQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFL-GAHIVYRTK--EGNLNKLGGLLPVMPAVAFMVLCAKLAISGV 376 (479)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC--CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999837688899999999999999999999-999999559--8529986281867799999999999999866
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------CCCCCHHHHHHHHHHHH
Q ss_conf 500006759999999996284999999999999999999999999964998778655------67332189999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV------VAKEMRLFIFGSILFVT 457 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 457 (478)
||++||+||+++++++++.+.++++++..+++++++.||+|.++.+|+++++++..+ .++.+...+.+..++++
T Consensus 377 Pp~~GF~sK~~i~~~a~~~~~~~l~~~~~~~sv~~~~y~lr~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~i 456 (479)
T PRK06277 377 PPFNGFQSKLLLAQAAMNVNMPELAIIMIIVSIGTFVSMMKAFYLIYLKPCPEEQLEEYKKAKVPKYAVFSLVVLTILCI 456 (479)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 66427999999999999838799999999999999999999999996088885433334667898879999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999767658999998751
Q gi|254780867|r 458 GYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~l 477 (478)
.++++|+++.+.++|.++++
T Consensus 457 ~~Gi~P~~~l~~i~p~~~~l 476 (479)
T PRK06277 457 ILGICPDLVTNIIYPFANEI 476 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99963399999899999986
No 30
>PRK12646 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=580.12 Aligned_cols=400 Identities=22% Similarity=0.327 Sum_probs=340.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..|..++...+..+.+|+..|+.+++++.+|||.+++++..+|++++.|+|++++|+|||+++++||+
T Consensus 69 gi~~~~~lDgLs~lf~lLi~~Ig~lV~~Ys~~Ym~~~~~~~~rF~~~lllF~~aMlglvlA~nli~lfvfWEl~si~Syl 148 (800)
T PRK12646 69 DINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFL 148 (800)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86589964376899999999999999999598758899974389999999999999999982799999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|++++++.+++.||+++++.|+..++.|+.++|..+||++++++........++........++++|++.|+||||
T Consensus 149 LIg~~~~~~~~~~aA~~~ll~t~~G~l~lL~g~~ll~~~~Gt~~~s~i~~~~~~~~~~~~~~~~~~liliGa~~KsAqfP 228 (800)
T PRK12646 149 LISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFP 228 (800)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98040898999999999999999999999999999999987418999999888752262899999999999999952066
Q ss_pred CCHHHHHHHHHHCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000121012210012333321-0000023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.||||||+ +|||+||++| +.++|+|+|.+.|+.+.+. ..+.+...+.++|.+|+++|++.|++|+|+||++||||
T Consensus 229 fH~WLP~Am~-APTPVSA~LhSa~mVKaGvyll~R~~p~~~-~~~~~~~~l~~~G~~T~l~ga~~Al~Q~DlKrlLAYST 306 (800)
T PRK12646 229 FHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLLRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYST 306 (800)
T ss_pred CCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7533355556-886599999999999999999999877622-36999999999999999999999996744899999999
Q ss_pred CCCCCCCCCCCCCHH---------------HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCH
Q ss_conf 112442111111215---------------77888864300232010011000026787408764550210466523211
Q gi|254780867|r 304 IGHAGYALIGFSTGM---------------LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIF 368 (478)
Q Consensus 304 i~q~G~i~~~l~~~~---------------~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~ 368 (478)
|+|+|||+.++|.++ .++.++++|.++|++.|.++|+++|.+.+++| +||++|+||++|+||.
T Consensus 307 vSqlG~i~l~iGlG~~~a~~~~~~l~~~~~~~l~aal~hl~~HalfKa~LFm~aG~I~~~tG--trdi~~LgGL~r~MP~ 384 (800)
T PRK12646 307 ISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAG--SRDIRILSGMRQLFPK 384 (800)
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHCCHHHHHHH
T ss_conf 99999999999757332202321023567779999999999999999999999999999718--7518784896642389
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 478999986530366500006759999999996284---------99999999999999999999999996499877865
Q gi|254780867|r 369 LTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF---------YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV 439 (478)
Q Consensus 369 ~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~---------~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~ 439 (478)
++.++.++.+|++|+||++||+||.+.+++..+.+. .....+..+++++++.|..|+....|+|+++++..
T Consensus 385 ta~~~~iaalSmaGlPP~~GF~sKE~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~s~lt~ays~r~~~~~F~g~~~~~~~ 464 (800)
T PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVF 464 (800)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999817852004888999999997334541034689999999999999999999999999703799987768
Q ss_pred C--CCCCCH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5--673321---8999999999999999767658
Q gi|254780867|r 440 V--VAKEMR---LFIFGSILFVTGYFLIENILNS 468 (478)
Q Consensus 440 ~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 468 (478)
+ ..+++. .........+..+++.|+.+.+
T Consensus 465 ~~~~~~~p~~~~~p~~~l~~~~~~~g~~p~~~~~ 498 (800)
T PRK12646 465 TKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGK 498 (800)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 9889998325656899999999999935474422
No 31
>PRK12644 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=578.22 Aligned_cols=405 Identities=21% Similarity=0.272 Sum_probs=349.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
.+.+..+..|.+|..|..++...+..+.+|+..|..+++.+.++||.+++++..+|++++.|+|++++|+|||+++++||
T Consensus 64 lgl~l~~rlDgLS~lfalli~~IG~lv~lYs~~Y~~~~~~~~~rF~~llllF~~aMlGlvls~dl~~lfvfWEltsl~Sy 143 (968)
T PRK12644 64 LGMDLAFRMDALAALMSLLVLGVGALVLLYCARYFDDDDGRLGRFAAELVAFAGAMFGLVLSDDLLLLYVFWELTTVLSF 143 (968)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88726887426789999999999999999968875148987125999999999999999998219999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||++|++++++.++++||++++.+|+..++.|+.++|..+||+|++++..... +......+..++++|++.|++||
T Consensus 144 lLIg~~~~~~~a~~aA~k~ll~t~~Ggl~lL~giilL~~~~Gt~~ls~i~~~~~---~~~~~~~a~~Lil~Ga~~KsAqf 220 (968)
T PRK12644 144 LLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPP---TGTAVSVAVVLILVGALSKSAIV 220 (968)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999764788889999999999999999999999999999938743999974476---64489999999999999986535
Q ss_pred CCCHHHHHHHHHHCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1000121012210012333321-000002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||+||||+|+ ||||+||++| +.++|+|+|.+.|+.+.+. ..+.|...+..+|.+|+++|++.|++|+|+||++|||
T Consensus 221 PfH~WLP~Ama-APTPVSA~LHSa~mVKaGvYll~R~~p~~~-~~~~w~~~l~~lG~~T~l~Ga~~Al~Q~DlKrlLAYS 298 (968)
T PRK12644 221 PFHFWLPGAMA-APTPVSAYLHAAAMVKAGVYLVARLAPGFA-DVPPWRPTVLGLGLATMLLGGWRALRQYDLKLILAYG 298 (968)
T ss_pred CCCCCCCHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46001651104-896799999999999999999999988752-3699999999999999999999999664489999998
Q ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 1112442111111215-778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 303 SIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 303 si~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||+|+|||+++++.++ .+..++++|+++|++.|.++|+++|.+.+++| +||++|++|+.|+||+++.++.++.+|++
T Consensus 299 TVSqLG~i~l~lGlgt~~a~~aa~~hll~HAlfKa~LFm~aG~i~h~tG--trdi~~LgGL~r~mP~Ta~~~~iaalSma 376 (968)
T PRK12644 299 TVSQLGFLTVVVGLGTRDAALAGLAMLVAHALFKATLFLVVGIIDHQTG--TRDIRKLSGLGRRSPPLAVVAALAAASMA 376 (968)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999986267999999999999999999999985638678708--75488838955303999999999999985
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCH----HHHHH
Q ss_conf 6650000675999999999628-----499999999999999999999999996499877865-5673321----89999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKRE-----FYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV-VVAKEMR----LFIFG 451 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~-----~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~-~~~~~~~----~~~~~ 451 (478)
|+||++||+||.+.+++..+.+ .++......+++++++.|..|++...|+++++++.. +..++.+ .....
T Consensus 377 GvPp~~GF~sKE~~~~a~l~~~~~~~~~~~~~~~~~~~s~lt~aYs~rf~~~~F~~~~~~~~~~~~~h~~~~~m~~pp~~ 456 (968)
T PRK12644 377 GLPPLLGFVAKEAAFEAVLHSMLLGPAGPWVLAGIVLGSVLTTAYSLRFLWGAFARKPGVPPRVTEMHPPSPAFLAAPAV 456 (968)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 16510279999999999870544211899999999999999999999999974268999988878899998078788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997676589999987
Q gi|254780867|r 452 SILFVTGYFLIENILNSSIMKIVM 475 (478)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~ 475 (478)
....++.+++.|+...+++.+.+.
T Consensus 457 La~~~l~~G~~p~~~~~~l~~~a~ 480 (968)
T PRK12644 457 LAALTLVLGLWPAPLDAVIGPYAD 480 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998227766888899999
No 32
>PRK06525 hydrogenase 4 subunit D; Validated
Probab=100.00 E-value=0 Score=578.39 Aligned_cols=451 Identities=18% Similarity=0.246 Sum_probs=355.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-H---------HHHHHHHHHHHH
Q ss_conf 862999999999999999999986402301589999999999999999999713221-0---------031676410079
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG-I---------GLGGAYISDRFS 76 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~-~---------~~~~~~~~D~~s 76 (478)
|+|+ +++|.++|.++++.........++... ......................+. . .....+.+|.+|
T Consensus 1 M~~L-~ll~illPll~a~l~~~l~~~~~~~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~D~ls 78 (480)
T PRK06525 1 MENL-ALLTLLLPFIGALVVSFLPGRRAAELG-VLFAALATLCMLVLISAFYQAGKVAVTLTLVNVGDVALFGLVIDPVS 78 (480)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHH
T ss_conf 9569-999999999999999998436899999-99999999999999999984898517887530356652256775767
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999632100------22420667999999999987314610221245777887777665320
Q gi|254780867|r 77 YFIKAILLMSSIIIFIKMFSCIYVKPF------SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNR 150 (478)
Q Consensus 77 ~~~~~l~~~~~l~~~~~~~~~~~~~~~------~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~ 150 (478)
..+..+....+..+.+++..|++++++ +.+|||.+++++..|+++++.|+|++++|++||++++++|.||++++
T Consensus 79 ~~~~~l~~~~~~l~~lys~~y~~~~~~~~~~~~~~~~f~~~~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li~~~~ 158 (480)
T PRK06525 79 VLILFVVVFLGLLVTIYSTGYMSPKNREHPVHEGTNRYYAFLLLFIGAMAGLVLSSTLLGLLLFFEITGLCSWALISYYQ 158 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999712223336576544189999999999999999980799999999999999999993758
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 00134455555401462046799889885300100000122221110134310000122221123444443211000121
Q gi|254780867|r 151 KSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIP 230 (478)
Q Consensus 151 ~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp 230 (478)
+ +++.||++||++++.+|+.+++.|+.++|..+||+|++++.+. ++........+++.|++.|+|+||||.|+|
T Consensus 159 ~-~~~~~aa~ky~i~~~~gs~~~l~gi~~ly~~~gt~~~~~l~~~-----~~~~~~~~~~~~l~~~~~K~~~~P~H~WLP 232 (480)
T PRK06525 159 S-DKAQRSALKALLITHIGSLGLYLAAATLFLQTGSFALSALSGL-----HGDLKLLVFGGILFAAWGKSAQLPLQAWLP 232 (480)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 7-8999999999999999999999999999986887389998715-----724899999999999999971545734477
Q ss_pred HHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0122100123333210-000023211111244000112221000001222102222000001244544356421112442
Q gi|254780867|r 231 DVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGY 309 (478)
Q Consensus 231 ~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~ 309 (478)
|+|+ +|+|+|+++++ ..+|+|.|.++|+.....+..+.+...+.++|++|+++|++.|++|+|+||++|||||+|+||
T Consensus 233 da~~-ap~pvsa~L~~~~~~k~g~y~l~r~~~~~~~~~~~~~~~l~~lg~~t~~~g~~~Al~Q~d~KrlLAYSSisq~G~ 311 (480)
T PRK06525 233 DAME-APTPVSAYLHAASMVKVGVYIFARAILDGGNIPHVIGYVGMVMAIVTMLYGFLMYLPQQDMKRLLAYSTITQLGY 311 (480)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 5346-897588899999999999999999999733149999999999999999999999998521106788869999999
Q ss_pred CCCCCCC----HHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
Q ss_conf 1111112----157788886430023201001100002678740876455021046652321147899998653036650
Q gi|254780867|r 310 ALIGFST----GMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPP 385 (478)
Q Consensus 310 i~~~l~~----~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp 385 (478)
+++|++. ++.+..++++|+++|++.|.++|+++|.+++++| +||++|++|+.|++|.++.++.++.+|++|+||
T Consensus 312 i~~gi~~~~~g~~~~~~g~l~~~i~H~~~k~~LFl~aG~i~~~~g--t~~i~~l~Gl~~~~P~~a~~f~i~~lsl~GiPp 389 (480)
T PRK06525 312 MFFGLSLSIFGSRLALEGSIAHIFNHAFAKSLFFLVAGALSYSCG--TRLLPRLRGVLKKMPLVGVGFCVAALAITGVPP 389 (480)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999713565899999999999999999999999989998708--973788659988739999999999999988777
Q ss_pred HHHHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0006759999999996284-----99999999999999999999999996499877865567332189999999999999
Q gi|254780867|r 386 FAGFFGKYFLLISAVKREF-----YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYF 460 (478)
Q Consensus 386 ~~GF~sK~~i~~~~~~~~~-----~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (478)
++||+|||+++++.++.+. +...++.+++++.+..|++|+.+.+|+|||+|+.++.++.+.. +......++..+
T Consensus 390 ~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~y~~~~~~~~f~g~~~~~~~~~~~~~~~-m~~~~~~L~~l~ 468 (480)
T PRK06525 390 FNGFFSKFPIFAGGFELSVEYWILLPAMILLLIESVASFAWFLRWFGRVVFGEPSEAVADAAPLPLS-MKLVLIVLIVMS 468 (480)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHHHHH
T ss_conf 6289999999999998576159999999999999999999999999999489997334778999887-999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 997676589
Q gi|254780867|r 461 LIENILNSS 469 (478)
Q Consensus 461 ~~~~~~~~~ 469 (478)
+..+.++++
T Consensus 469 i~~Gv~p~P 477 (480)
T PRK06525 469 LISSVIAAP 477 (480)
T ss_pred HHHHHHCCC
T ss_conf 999981531
No 33
>PRK07376 NAD(P)H-quinone oxidoreductase subunit F; Validated
Probab=100.00 E-value=0 Score=574.04 Aligned_cols=365 Identities=23% Similarity=0.351 Sum_probs=322.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+..+.+|++|..+..++...+.++.+|+.+|+++++. ..||+.++.++..+|++++.|+|++++|++||++++++|.|
T Consensus 83 ~~~~~~~D~ls~~m~~~vt~v~~lv~iys~~Ym~~d~~-~~rf~~~l~lf~~~ml~lv~s~nl~~lfv~wE~~gl~SylL 161 (667)
T PRK07376 83 LPMGYVIDPLGAVMLVLVTTVALLVMIYSHGYMAHDPG-YVRFFAYLSLFSSSMLGLVVSPNLVQIYVFWELVGMCSYLL 161 (667)
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 79888965378999999999999999992886379998-41699999999999999999652999999999999999998
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC----C-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 653200013445555540146204679988988530010000012222111013----4-31000012222112344444
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG----H-RSFVLIVGVVLILVGLFFKM 220 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~----~-~~~~~~~~~~ll~~g~~~K~ 220 (478)
|++|.+|+++.+|+.||++++++||..+++|+..+|..+||+|++++.+...+. . ..........++++|...|+
T Consensus 162 Ig~~~~~~~a~~aa~kafi~~r~Gd~~~l~gi~~l~~~~gt~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~Ks 241 (667)
T PRK07376 162 VGFWYDRKGAAHAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFNGIADGLSQLVSSGAVPGWLALLLCILVFLGPMAKS 241 (667)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 86106866899999999999858699999999999999679719999999988764366546899999999999987673
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321100012101221001233332100-0002321111124400011222100000122210222200000124454435
Q gi|254780867|r 221 ALVPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 221 ~~fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
||||+|.||||||| +|||+||++|+. ++++|+|.+.|..+.+. ..+....++.++|.+|+++|+..|+.|+|+||++
T Consensus 242 aq~Plh~WLPdAm~-gPTpvSAllhaatmv~aGvyl~~R~~~~~~-~~~~~~~~i~~~G~~T~~~~a~~Al~q~DiKr~L 319 (667)
T PRK07376 242 AQFPLHVWLPDAME-GPTPISALIHAATMVAAGVFLVARMYPVFE-QFPAVMTVIAWTGAITAFLGASIALTQNDIKKGL 319 (667)
T ss_pred CCCCCCCCCHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30776235724304-997099999999999978971101353153-1689999999999999999999998641366888
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCC-------CCCCCHHHCCCCCCCCHHHHH
Q ss_conf 6421112442111111215778888643002320100110000267874087-------645502104665232114789
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN-------NIQNISDLAGLSRQDIFLTCA 372 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~-------~~~~i~~l~gl~~~~P~~~~~ 372 (478)
||||+||+|||++|+|.+. ..++++|+++|++.|.++|+++|.+.+..++ ++||++++||++|+||++..+
T Consensus 320 AYSTisqlGym~~~~g~g~--~~aa~~hl~~Ha~fKalLFl~aG~vih~~~~~~~h~~~~~~d~~~mggl~~~mP~t~~~ 397 (667)
T PRK07376 320 AYSTISQLGYMMMAMGCGA--YVAGLFHLVTHAYFKAMLFLGSGSVIHGMEEVVGHEPVLAQDMRLMGGLRKYMPITAIT 397 (667)
T ss_pred HHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHH
T ss_conf 5346878889999941772--89999999989999999985233543213330357875540789858976687699999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9998653036650000675999999999628499999999999999999999999996499877
Q gi|254780867|r 373 LTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTE 436 (478)
Q Consensus 373 ~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~ 436 (478)
++++.+|++|+||++||+||+.+++++++++ +.+..+.++++.+|++|..|.+...|.||++.
T Consensus 398 ~~ig~lsl~GiPp~~GF~SKd~il~~a~~~~-~~~~~i~l~~a~lTafY~~Rl~~l~F~G~~r~ 460 (667)
T PRK07376 398 FLIGCLAISGIPPFAGFWSKDEILGAAFEAN-PALWFVGFLTAGMTAFYMFRLYFLTFEGEFRG 460 (667)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9998898711741105764899999998748-28999999999988999999999996586676
No 34
>PRK05846 NADH dehydrogenase subunit M; Reviewed
Probab=100.00 E-value=0 Score=571.10 Aligned_cols=451 Identities=20% Similarity=0.329 Sum_probs=359.0
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH--HCCC------------CHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999864023015899999999999999999997--1322------------10031676410079999999
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI--MPYE------------GIGLGGAYISDRFSYFIKAI 82 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~--~~~~------------~~~~~~~~~~D~~s~~~~~l 82 (478)
+++.++++......+..+|..+..........+......... ...+ +.+.+..+..|.++..+..+
T Consensus 11 l~Pllgall~~l~~~~~~~~~~~~a~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~w~~~~gi~~~l~~D~ls~~~~~l 90 (495)
T PRK05846 11 FLPLIGGLLILLTERAARRLARWIALITTLLTLALSLVLWIGFDPSNPGFQFVEKVPWIPRFGISYHLGVDGISLLLVVL 90 (495)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 99999999999972532789999999999999999999999974788864899864456666806898510878999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999963210022420667999999999987314610221245777887777665320001344555554
Q gi|254780867|r 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKY 162 (478)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky 162 (478)
..+.+.....++.. +.++ +.++|+.+++++..|+++++.|+|++++|++||++++++|.||++|+++ ++.+|++||
T Consensus 91 ~~~v~~~~~l~s~~--~~~~-~~~~f~~~~ll~~~~m~g~~~a~dl~~~fvf~El~~i~sy~Li~~~~~~-~~~~Aa~ky 166 (495)
T PRK05846 91 TALLTPLAVLASWE--EIKK-RVKFYMAALLILEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGK-NRIYAATKF 166 (495)
T ss_pred HHHHHHHHHHHHHH--HCCC-CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHH
T ss_conf 99999999999866--3146-3018999999999999999997629999999999999999999975977-999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHCC-----CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 014620467998898853001-----000001222211101343100001222211234444432110001210122100
Q gi|254780867|r 163 FVLGAFSSAFLLYGISFIYGF-----TGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSP 237 (478)
Q Consensus 163 ~~~~~~g~~~ll~g~~~~y~~-----~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap 237 (478)
++++++|+.+++.|+..+|.. +||+|+.++.+.. .+.........+++.|+++|+|++|||.|+||+|++||
T Consensus 167 ~i~~~~gs~~~L~gi~~l~~~~~~~~~gs~~~~~l~~~~---~~~~~~~~~~~~~~~g~~~K~a~~PfH~WlPday~~ap 243 (495)
T PRK05846 167 FLYTLLGSLLMLVAIIYLVVVYYNAGVGTFDIADLLNTP---LPAGVQYLLFLAFFIAFAVKMPMFPLHTWLPDAHVEAP 243 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
T ss_conf 999999999999999999999963454013899998555---77258999999999999998622423322467667899
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1233332100000232111112440001-122210000012221022220000012445443564211124421111112
Q gi|254780867|r 238 MFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFST 316 (478)
Q Consensus 238 ~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~ 316 (478)
+|+|+++|++++|+|.|+++|+.....+ ..+.+...+.++|++|+++|++.|++|+|.||++|||||+|+||+++|++.
T Consensus 244 ~~vsalls~~~~k~g~y~l~R~~~~~f~~~~~~~~~~l~~lg~~t~~~g~~~Al~Q~d~KrllAYSsisq~G~il~g~~~ 323 (495)
T PRK05846 244 TAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFA 323 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 53777788999999999889976113530159999999999988899899999998320047899899999999999986
Q ss_pred H-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 1-577888864300232010011000026787408764550210466523211478999986530366500006759999
Q gi|254780867|r 317 G-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFL 395 (478)
Q Consensus 317 ~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i 395 (478)
+ ..+..++++|+++|++.|.++|.++|.+++++| +||++++||+.|++|.++.++.++.+|++|+||++||+||+++
T Consensus 324 ~~~~~~~~a~~~~~~h~~~k~~lF~~~g~i~~~~g--~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~GF~~k~~i 401 (495)
T PRK05846 324 GNQLGVQGAIFQMISHGLSSAALFLLVGVLYDRLH--TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI 401 (495)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 76999999999999999999999999999999649--8173523784654968899989999998267530518899999
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999996284999999999999999999999999964998778655----6733218999999999999999767658999
Q gi|254780867|r 396 LISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV----VAKEMRLFIFGSILFVTGYFLIENILNSSIM 471 (478)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (478)
++++++.+ +|++++..++++++..|++|.++.+|+++++++.++ .+..+...+......++.++++|+++.+.++
T Consensus 402 ~~~~~~~~-~~~~~~~~~~~~l~~~y~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~Gi~P~~~~~~i~ 480 (495)
T PRK05846 402 LLGSFQVN-PWIAFIATTGLILAAVYSLWLYKRVMFGPVAKEEEAELKDLNGRELLILLPLVALLILLGVYPKPLLDVIH 480 (495)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999874-99999999999999999999999998189895224477899987999999999999999970799999999
Q ss_pred HHHHHC
Q ss_conf 998751
Q gi|254780867|r 472 KIVMSL 477 (478)
Q Consensus 472 ~~~~~l 477 (478)
+.++++
T Consensus 481 ~a~~~l 486 (495)
T PRK05846 481 PSVENL 486 (495)
T ss_pred HHHHHH
T ss_conf 999999
No 35
>PRK06473 NAD(P)H-quinone oxidoreductase subunit D4; Validated
Probab=100.00 E-value=0 Score=568.21 Aligned_cols=400 Identities=23% Similarity=0.317 Sum_probs=338.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
.+.+|.++..+..+.. .+..+..+..+ .+++++++||.+++++..++++++.|+|++++|++||++++++|.||++
T Consensus 74 ~l~vDgls~~ll~lt~---~l~~i~i~~~~-~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~ 149 (500)
T PRK06473 74 HLGVDGLSLPLLVLNS---LLTLIAIYSSD-ESLERPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAI 149 (500)
T ss_pred EEEHHHHHHHHHHHHH---HHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7535888999999999---99999999636-6556412999999999999999999752999999999999999999994
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 20001344555554014620467998898853001000001222211101343100001222211234444432110001
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMW 228 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~W 228 (478)
|+++ ++.+|+.||++++.+|+.+++.|+..+|..+|+.|++.......+ .+.......+.+++.|+++|+|+||||.|
T Consensus 150 ~g~~-~~~~aa~ky~i~~~~gs~~~L~gi~~l~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~l~gf~~K~~~~P~H~W 227 (500)
T PRK06473 150 WGGQ-RRGYAATKFLLYTAISGILVLVSFLGLVWLSGASSFDYEPLLSHT-LPLATQLLLLAPILVGFGIKIPLVPFHTW 227 (500)
T ss_pred CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 3878-889999989999975268999999999999386508899998726-75248999999999999986213121503
Q ss_pred HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2101221001233332100000232111112440001-122210000012221022220000012445443564211124
Q gi|254780867|r 229 IPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 229 lp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
+||+|.+||+|+|+++|++++|+|.|+++|+.....+ ....+...+.++|++|+++|++.|++|+|+||++|||||+|+
T Consensus 228 LPdA~~~aPt~vSallsg~l~K~G~y~liR~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~DlKrllAYSSis~m 307 (500)
T PRK06473 228 LPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307 (500)
T ss_pred HCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14142008985047788999988899879866641245799999999999999998999999998036278898569999
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCC---CCCCCHHHHHHHHHHHHCCCC
Q ss_conf 42111111215-77888864300232010011000026787408764550210466---523211478999986530366
Q gi|254780867|r 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGL---SRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 308 G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl---~~~~P~~~~~~~i~~lsl~Gl 383 (478)
||+++|++.++ .+..++++|+++|++.|.++|+++|.+++++| +||++|+||+ .|+||.++.++.++.+|++|+
T Consensus 308 G~i~lgi~~~~~~g~~ga~~~~i~H~~~k~~LFl~~G~i~~~~g--t~~i~~lgGL~~~~~~mP~~~~~f~i~~la~~G~ 385 (500)
T PRK06473 308 GYILLAAAAATPLSILAAVAQMISHGLISALLFLLVGVVYKKTG--SRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385 (500)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999676567999999999999999999999999998628--8139985894533220839999999999987177
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHH
Q ss_conf 50000675999999999628499999999999999999999999996499877865567---332189999999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA---KEMRLFIFGSILFVTGYF 460 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 460 (478)
||++||+||++++++.++. .++.+.+..+++++++.|++|.++.+|+||.+++.++.+ ..+...+.+..+.++.++
T Consensus 386 Pp~~GF~~k~li~~g~~~~-~~~~~~~~~~~~~lta~Y~l~~~~~~f~G~~~~~~~~~~~~~~~~~~~~~~L~~~~i~~G 464 (500)
T PRK06473 386 PGMVGFIAEFLVFRGSFPI-FPVQTLLCMIGTGLTAVYFLLLINRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVILG 464 (500)
T ss_pred CCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 4304099999999999998-599999999999999999999999998089970025689973869999999999999999
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99767658999998751
Q gi|254780867|r 461 LIENILNSSIMKIVMSL 477 (478)
Q Consensus 461 ~~~~~~~~~~~~~~~~l 477 (478)
++|+++.+.+++.++++
T Consensus 465 i~P~~~l~~~~~aa~~l 481 (500)
T PRK06473 465 IQPSWLVRWSEPTASAL 481 (500)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 76899999999999999
No 36
>MTH00204 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=571.07 Aligned_cols=397 Identities=21% Similarity=0.320 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
.+.+|.+|..+..+..+.+....++++ +..+++.++|+.++++...++++++.|+|++.+|++||.+.+|+|.||+.
T Consensus 78 ~lgvDglsl~l~lLt~~l~~i~~l~s~---~~~~~~~~~f~~~ll~l~~~~lg~f~s~dl~~fyvf~E~~lip~y~LIg~ 154 (486)
T MTH00204 78 VFAVDGVSLFFLLLTTLLIPICILISW---KSIKFLFKEFLLCLLFLEVLLIGVFLVLDLLLFYILFEGILIPMFLLIGV 154 (486)
T ss_pred HEEECHHHHHHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 120463769999999999999999874---74024288999999999999999999817999999999999999999888
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 20001344555554014620467998898853001000001222211101343100001222211234444432110001
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMW 228 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~W 228 (478)
|++|+++.+|+.||++++.+||.++++|+..+|..+||+|++++.+..... ..+......++.|+.+|++++|||.|
T Consensus 155 wG~~~~r~~Aa~k~~lyt~~gs~~~L~gi~~ly~~~gs~~~~~l~~~~~~~---~~~~~~~~~~~l~f~vK~~~~P~H~W 231 (486)
T MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYQITGTTDYQILLNIKLPL---STQKWALVGFFLSLAVKIPQIPFHIW 231 (486)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 299789999999999999998999999999999982843799999720331---47999999999999998625146376
Q ss_pred HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2101221001233332100000232111112440001-122210000012221022220000012445443564211124
Q gi|254780867|r 229 IPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 229 lp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
+||||++||+|+|++++++++|+|.|+++|+..+..+ ....+...+..+|++|+++|++.|++|+|+||++|||||+|+
T Consensus 232 LPda~~~APt~~S~llag~l~K~g~ygllR~~~~~~p~~~~~~~~~i~~l~~is~i~g~l~Al~Q~dlKrllAYSSIshm 311 (486)
T MTH00204 232 LPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPVIVMLSVIAVIYGSLMTCRQVDFKRLIAYSSVAHM 311 (486)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 25537889922778888999998788679888774431068888999998999999999999998888999999669999
Q ss_pred CCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 4211111121-577888864300232010011000026787408764550210466523211478999986530366500
Q gi|254780867|r 308 GYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPF 386 (478)
Q Consensus 308 G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~ 386 (478)
||+++|++.+ ..|..++++|+++|++.|.++|.++|.+++|++ +||++++||+.|++|.++.++.++.+|++|+||+
T Consensus 312 G~i~lgl~~~~~~g~~ga~~~mi~Hg~~~~~LF~~~g~i~~~~~--t~~i~~~gGL~~~~P~~a~~~~i~~la~~GlP~~ 389 (486)
T MTH00204 312 GLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHH--TRLIKYYRGVTLTMPLFVIIMLVLSLANMGIPLS 389 (486)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999667478999999999999999999999999986048--5879996893444879999999999998189764
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 006759999999996284999999999999999999999999964998778655---67332189999999999999997
Q gi|254780867|r 387 AGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV---VAKEMRLFIFGSILFVTGYFLIE 463 (478)
Q Consensus 387 ~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 463 (478)
+||+||++++.+.++.+ ++.+++..++.++++.|++|.++++++|+++++.+. .+..+...+.+..+.++.++++|
T Consensus 390 ~gF~ge~~i~~g~~~~~-~~~~~~~~~~~vlsa~Y~l~~~~~~~~g~~~~~~~~~~d~~~~e~~~~~~L~~~~i~~Gi~P 468 (486)
T MTH00204 390 CNFVGEFFSLLAAFEYN-YGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFNRDLNRRELLAILPLLIAIFLGGIVP 468 (486)
T ss_pred CCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 75889999999999985-99999999999999999999999987599985444679999879999999999999999731
Q ss_pred HHHHHHHHHHH
Q ss_conf 67658999998
Q gi|254780867|r 464 NILNSSIMKIV 474 (478)
Q Consensus 464 ~~~~~~~~~~~ 474 (478)
+++.+.+.+.+
T Consensus 469 ~~il~~i~~sv 479 (486)
T MTH00204 469 FPIIDLVKNSL 479 (486)
T ss_pred HHHHHHHHHHE
T ss_conf 98998887742
No 37
>MTH00210 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=566.56 Aligned_cols=434 Identities=18% Similarity=0.224 Sum_probs=348.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHH--CCCC-------------HHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998640230158999999999999-999999971--3221-------------00316764100799999
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLS-IALFFLLIM--PYEG-------------IGLGGAYISDRFSYFIK 80 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~-i~l~~~~~~--~~~~-------------~~~~~~~~~D~~s~~~~ 80 (478)
++|.+++++....++..+++.............. ......... ..+. ...+..+..|.++..+.
T Consensus 7 ~lPLi~ali~~l~gr~~~~~~~~~i~~~~~~~s~lls~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~D~ls~~m~ 86 (618)
T MTH00210 7 FFPLLSAIISGLFGRKIGTKGAGVLTSSCIVISAIVSCCIFYETTLNSSVTYIKLWRWFDSELLTTYFGLQFDSLTSTML 86 (618)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHH
T ss_conf 99999999999807876621799999999999999999999998347980799862053356767157755326389999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999999999999999632100224206679999999999873146102212457778877776653200013445555
Q gi|254780867|r 81 AILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAAL 160 (478)
Q Consensus 81 ~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ 160 (478)
.++...+..+.+++.+|++++++ ..||+.++.++..+|++++.|+|++++|++||++++++|.||++|++|+++.+|+.
T Consensus 87 ~~v~~is~lv~iYS~~Ym~~d~~-~~rf~~~l~lf~~~Ml~lv~s~nl~~lfvgWE~vgl~SylLI~~~~~~~~a~~aa~ 165 (618)
T MTH00210 87 IVITSVSALVHIYSTGYMSGDPH-IPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAI 165 (618)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999999999999998168998-02899999999999999999724999999999999999999975088688999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 54014620467998898853001000001222211101343100001222211234444432110001210122100123
Q gi|254780867|r 161 KYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFM 240 (478)
Q Consensus 161 ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~ 240 (478)
||++++++||.++++|+.++|..+||+|++++........++........++++|...|+||+|+|.||||||| +|||+
T Consensus 166 ka~i~nrvGd~~lllgi~~l~~~~Gtl~~~~l~~~~~~~~~~~~~~~i~~ll~iga~~KsAqfPlh~WLPdAm~-aPTPV 244 (618)
T MTH00210 166 KAMLVNRVGDIGLVLAMIKILKEFGSLEFSTIYSLLSLVINKESITIICLLLFVGAVGKSAQLGLHTWLPDAME-GPTPV 244 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC-CCCCH
T ss_conf 99999978799999999999999678619999999874027645999999999999998450654652267745-89961
Q ss_pred CCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3332100-000232111112440001122210000012221022220000012445443564211124421111112157
Q gi|254780867|r 241 TAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGML 319 (478)
Q Consensus 241 salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~ 319 (478)
||++|+. ++++|+|.+.|..+.+. ..+.....+.++|.+|+++|++.|+.|+|+||++||||++|+|||+++++.+.
T Consensus 245 SALlhaatmV~aGvyll~R~~~l~~-~~~~~~~~v~~~G~~T~~~~~~~Al~Q~DiKrilAySTiSQlGym~~~~gl~~- 322 (618)
T MTH00210 245 SALIHAATMVTAGVFLIIRSGPLFE-GSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGLSN- 322 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-
T ss_conf 4999999999989998855417753-17899999999999999999999997863778864315988889999986145-
Q ss_pred HHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78888643002320100110000267874087645502104665232114789999865303665000067599999999
Q gi|254780867|r 320 GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~ 399 (478)
..++++|+++|++.|..+|+++|.+.+..+ ++||++|+||+.|+||.++.++.++.+|++|+||++||+||+.+++..
T Consensus 323 -~~~a~fHl~~Ha~fKalLFL~aG~vih~~~-~~qdi~~mgGL~~~mP~t~~~~~i~~lsl~G~P~~sGF~SKd~ile~~ 400 (618)
T MTH00210 323 -YSTSLFHLMNHAFFKALLFLSAGSVIHAVS-DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELV 400 (618)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHH
T ss_conf -889999999899999999981349887537-733998818853457589999999999982560313041189999999
Q ss_pred HHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHHHHHHHHHH
Q ss_conf 962849999-99999999999999999999964998778655---6733218999999999
Q gi|254780867|r 400 VKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVV---VAKEMRLFIFGSILFV 456 (478)
Q Consensus 400 ~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~ 456 (478)
++++...++ .+..+++.+|..|..|.+...|+++++.+..+ ..|++..+..+..++.
T Consensus 401 ~~~~~~~~~~~~~~~~~~lT~~Ys~r~~~~~f~~~~~~~~~~~~~~he~~~~m~~Pl~~La 461 (618)
T MTH00210 401 YDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVLMGVHESSWNITIPLVLLA 461 (618)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8762799999999999999999999999987337999987666678888789999999999
No 38
>MTH00217 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=569.92 Aligned_cols=396 Identities=20% Similarity=0.325 Sum_probs=343.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64100799999999999999999999996321002242066799999999998731461022124577788777766532
Q gi|254780867|r 70 YISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMN 149 (478)
Q Consensus 70 ~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~ 149 (478)
+.+|.+|..+..+..+.+.+... ..++..+++.++|+.++++...++++++.|+|++++|++||++++++|.||+.|
T Consensus 76 lgvDgls~~lv~Lt~~l~~i~~l---~s~~~~~~~~~~f~~~~L~~~~~~lGvf~s~Dl~~fyvf~E~~lip~y~LI~~w 152 (482)
T MTH00217 76 FGVDGISIFFIILTALLIPICVL---ISLKSIKFLIKEFLLCLLFIEVLLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152 (482)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHH---HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 25646779999999999999999---853741142789999999999999999998389999999999999999945364
Q ss_pred HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 00013445555540146204679988988530010000012222111013431000012222112344444321100012
Q gi|254780867|r 150 RKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWI 229 (478)
Q Consensus 150 ~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wl 229 (478)
++++++.+|+.||++++.+||.+++.|+..+|..+||+|++++.....+ ..........+++|+.+|++++|||.|+
T Consensus 153 g~~~~~~~Aa~k~~l~t~~Gs~~~L~gi~~ly~~~Gt~~~~~l~~~~~~---~~~~~~~~~~~~i~f~vK~~~~PfH~WL 229 (482)
T MTH00217 153 GSREEKIQASYYFFFYTFIGSVFMLLGIFTLYSNAGSTDYQALCCLKIE---KELQYFVFIGFFLSLAIKIPKIPFHIWL 229 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7898999999999999989999999999999998087429999975044---4689999999999999997052025035
Q ss_pred HHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 101221001233332100000232111112440001-1222100000122210222200000124454435642111244
Q gi|254780867|r 230 PDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308 (478)
Q Consensus 230 p~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G 308 (478)
||+|++||+|+|++++++++|+|.|+++|+..+..+ ....+...+..+|++|+++|++.|++|+|+||++|||||+|+|
T Consensus 230 Pda~~~APt~~S~llagvl~K~g~ygliR~~~~l~p~~~~~~~~~i~~l~~itii~ga~~Al~Q~diKrllAYSSIshmG 309 (482)
T MTH00217 230 PQAHVEAPVAGSVVLAGVLLKLGGYGFIRFSWPLLPDAAEYFGPLILTLSLFAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309 (482)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 05722388068888889888875666699998755003766417999987888999999998831666999998998999
Q ss_pred CCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf 211111121-5778888643002320100110000267874087645502104665232114789999865303665000
Q gi|254780867|r 309 YALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFA 387 (478)
Q Consensus 309 ~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~ 387 (478)
|+++|++.+ ..|..++++|+++|++.|.++|.++|.++++++ +||++++||+.|++|.++.++.++.+|++|+||++
T Consensus 310 ~i~lgl~~~~~~g~~ga~~~~i~H~~~~~~LFl~~g~i~~~~~--t~~i~~~gGL~~~~P~~~~~~~i~~ls~~GlP~~~ 387 (482)
T MTH00217 310 LVTLGLFSHTIQGLVAAVFLMLAHGLVSSALFIAVTFLYDRYH--TRLIKYYRGMAITMPLFGMLLLILVLANASIPLSC 387 (482)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999727899999999999999999999999999997138--53799958956659398999999999972578646
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0675999999999628499999999999999999999999996499877865---5673321899999999999999976
Q gi|254780867|r 388 GFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSILFVTGYFLIEN 464 (478)
Q Consensus 388 GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (478)
||+||++++.++++.+ ++.++++.+++++++.|++|.++++++|+++++.+ +.++.+...+.+..+.++.++++|.
T Consensus 388 GF~ge~~i~~~~~~~~-~~~~~~a~~~~il~a~Y~l~~~~~v~~g~~~~~~~~~~d~~~~e~~~~~~L~~l~i~~Gl~P~ 466 (482)
T MTH00217 388 NFIGEFLSLLAAFEYS-FIAGVLASVGMVLSAGYSIYMYNRICFGAFSKYLYFSRDLNRREFYSILPLVILIIIMGVFPF 466 (482)
T ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 2899999999999985-999999999999999999999999983898865557799986599999999999999996429
Q ss_pred HHHHHHHHHH
Q ss_conf 7658999998
Q gi|254780867|r 465 ILNSSIMKIV 474 (478)
Q Consensus 465 ~~~~~~~~~~ 474 (478)
+..|.+++.+
T Consensus 467 ~~ld~i~~sv 476 (482)
T MTH00217 467 LVVDEVKGSI 476 (482)
T ss_pred HHHHHHHHHE
T ss_conf 9997665640
No 39
>CHL00025 ndhF NADH dehydrogenase subunit 5
Probab=100.00 E-value=0 Score=569.03 Aligned_cols=365 Identities=22% Similarity=0.329 Sum_probs=322.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
..+..+.+|++|..+..++...+.++.+|+.+|+.+++. ..||+.++.++..+|++++.|+|++++|++||+++++||.
T Consensus 82 ~~~~~~~~D~ls~~m~~~vt~v~~lv~iYS~~Ym~~d~~-~~rff~~l~lf~~~ml~lv~s~nl~~~fv~wE~~gl~Syl 160 (738)
T CHL00025 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQG-YLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160 (738)
T ss_pred EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 168888973688999999999999999995897179998-0579999999999999999947499999999999999878
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCCCCCCCCCCC
Q ss_conf 6653200013445555540146204679988988530010000012222111013-----43100001222211234444
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG-----HRSFVLIVGVVLILVGLFFK 219 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~-----~~~~~~~~~~~ll~~g~~~K 219 (478)
||++|.+|+++.+|+.||++++++||..+++|+..+|..+||+|++++.+...+. .+.....+...++++|...|
T Consensus 161 LIgf~~~~~~a~~aa~kafi~~riGd~~~l~gi~~l~~~~gt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K 240 (738)
T CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240 (738)
T ss_pred HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 41132388578899999999997999999999999999985877999999998765426766799999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4321100012101221001233332100-000232111112440001122210000012221022220000012445443
Q gi|254780867|r 220 MALVPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRL 298 (478)
Q Consensus 220 ~~~fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krl 298 (478)
+||||+|.||||||| +|||+||++|+. ++++|+|.+.|+.+.+. ..+....++.++|.+|+++|+.+|+.|+|+||+
T Consensus 241 sAq~Plh~WLPdAm~-~PTPvSAlihaatmV~aGvyl~~R~~~~~~-~~p~~~~~v~~ig~~T~~~~a~~a~~q~DiKr~ 318 (738)
T CHL00025 241 SAQFPLHVWLPDAME-GPTPISALIHAATMVAAGIFLVARLLPLFI-VIPYIMNLISLIGIITALLGATLALAQKDIKRG 318 (738)
T ss_pred HCCCCCCCCCCHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 430755002503205-997088999887898844765634726765-068999999999999999999999868878888
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCC-------CCCCCCHHHCCCCCCCCHHHH
Q ss_conf 5642111244211111121577888864300232010011000026787408-------764550210466523211478
Q gi|254780867|r 299 MAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDG-------NNIQNISDLAGLSRQDIFLTC 371 (478)
Q Consensus 299 lAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~-------~~~~~i~~l~gl~~~~P~~~~ 371 (478)
|||||+||+|||++++|.+. ..++++|+++|++.|.++|+++|++.+..+ +++||+++|||++|+||++..
T Consensus 319 LAyST~sQlGym~~~~g~g~--~~aa~~Hl~~Ha~fKalLFl~aGsvih~~~~~~~~~~~~~qd~~~mgGl~k~mP~t~~ 396 (738)
T CHL00025 319 LAYSTMSQLGYMMLALGMGS--YRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKT 396 (738)
T ss_pred HHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHH
T ss_conf 88758988899999646995--8999999999999999999888899997102124576777048886494558669999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999865303665000067599999999962849999999999999999999999999649987
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQST 435 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~ 435 (478)
+++++.+|++|+||++||+||+.|++++++.+ +++..+.+++..+|++|+.|.+...|.||++
T Consensus 397 ~f~ig~lal~GiPp~~GF~SKd~Il~~a~~~~-~~l~~~~~~tA~lTAFYm~Rl~fltF~G~~R 459 (738)
T CHL00025 397 TFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIAWSTAGLTAFYMFRIYLLTFEGHLR 459 (738)
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
T ss_conf 99998899826864125876999999998746-2999999999999999999999822478665
No 40
>PRK07363 NAD(P)H-quinone oxidoreductase subunit M; Validated
Probab=100.00 E-value=0 Score=567.07 Aligned_cols=400 Identities=23% Similarity=0.329 Sum_probs=340.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
.+.+|.+|..+..+..+ ...+..++.+++++ ++++||.+++++..|+++++.|+|++++|++||++++++|.||++
T Consensus 74 ~l~vD~ls~~~l~lt~~---~~~i~i~s~~~~~~-~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~ 149 (499)
T PRK07363 74 SLGVDGLSLPLIVLNSL---LTWIAIYSIGENVE-RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149 (499)
T ss_pred EEEEHHHHHHHHHHHHH---HHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88403878999999999---99999986311257-665999999999999999999816999999999999999998836
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 20001344555554014620467998898853001000001222211101343100001222211234444432110001
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMW 228 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~W 228 (478)
|+++ ++.+|+.||++++.+|+.+++.++..+|..+|+.|++.......+.+. ........+++.|+++|+|++|||.|
T Consensus 150 ~g~~-~~~~Aa~ky~i~~~~g~~~~L~~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~l~l~gf~vK~~~~P~H~W 227 (499)
T PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAVSTQNLSL-NTQLILLTLLLLGFGIKIPLVPLHTW 227 (499)
T ss_pred CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 8986-899999999999988899999999999999676167899999731642-38999999999999986261644304
Q ss_pred HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21012210012333321000002321111124400011-22210000012221022220000012445443564211124
Q gi|254780867|r 229 IPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 229 lp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
+||+|+++|+++|++++++++|+|.|+++|+.....+. ...+...+.++|++|+++|++.|++|+|+||++|||||+|+
T Consensus 228 LPdA~~~ap~~~s~llsg~~~K~G~y~liR~~~~l~~~~~~~~~~~l~~lg~it~~~ga~~Al~Q~d~KrllAYSSisqm 307 (499)
T PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307 (499)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40341459986115658999999999999987740455899999999999999898899999998317799999899999
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCC---CCCCHHHHHHHHHHHHCCCC
Q ss_conf 42111111215-778888643002320100110000267874087645502104665---23211478999986530366
Q gi|254780867|r 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLS---RQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 308 G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~---~~~P~~~~~~~i~~lsl~Gl 383 (478)
||+++|++.++ .+..|+++|+++|++.|.++|+++|.+++++| +||++|+||+. |+||.++.++.++.+|++|+
T Consensus 308 G~i~lgi~~~~~~g~~gal~~~~~H~l~ka~LFl~~G~i~~~~g--t~~i~~lgGL~~~~k~mP~~~~~f~i~~la~~Gl 385 (499)
T PRK07363 308 GYILVAAAAGTELSLLGAVAQMISHGLILALLFHLVGIVERKVG--TRDLDVLNGLMNPIRGLPLTSALLILAGMASAGI 385 (499)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999667477889999999999999999999999999819--7239986185654323839999999999997488
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHH
Q ss_conf 500006759999999996284999999999999999999999999964998778655673---32189999999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAK---EMRLFIFGSILFVTGYF 460 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 460 (478)
||++||+||++++++.+++ .++.+.+..+++++++.|++|.++++|+|+++++..+.++ .+...+.+....++.++
T Consensus 386 Pp~~GF~sk~~i~~g~~~~-~~~~~~~~~~~~~lta~Y~l~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~G 464 (499)
T PRK07363 386 PGLVGFVAEFIVFQGSFSA-FPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNQLAYYPKVLWSEKIPALILTAIILFLG 464 (499)
T ss_pred CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8635188999999999998-599999999999999999999999998189986444578873757999999999999999
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99767658999998751
Q gi|254780867|r 461 LIENILNSSIMKIVMSL 477 (478)
Q Consensus 461 ~~~~~~~~~~~~~~~~l 477 (478)
++|+++.+.+++.++++
T Consensus 465 i~P~~~l~~~~~~~~~l 481 (499)
T PRK07363 465 VQPNWLVRWSEPTTTSM 481 (499)
T ss_pred HCHHHHHHHHHHHHHHH
T ss_conf 67498998889999999
No 41
>PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Probab=100.00 E-value=0 Score=570.13 Aligned_cols=399 Identities=19% Similarity=0.292 Sum_probs=337.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
.+..|.+|..+..+..+.+.+..+++ ++ .+++.++|+.++++...++++++.|+|++++|+|||++++++|.||++
T Consensus 85 ~lgvDglSl~lvlLt~~l~~l~~l~s---~~-~~~~~~~f~~l~L~~~~~m~gvf~a~Dl~~fyvf~E~~~i~sy~LIg~ 160 (531)
T PRK02546 85 SVGADGLSMPLILLTGFITTLAVLAA---WP-VTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 160 (531)
T ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHC---CC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98525668999999999999999740---54-466630999999999999999999807999999999999999999998
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2000134455555401462046799889885300100000--12222111013431000012222112344444321100
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTG--FSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFH 226 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~--~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH 226 (478)
|+++ ++.+|+.||++++..|+.+++.++..+|..+|+.+ +.++... ..+.......+..+++|+++|+++||||
T Consensus 161 ~g~~-~~~~Aa~k~~l~t~~gs~~lL~~~~~l~~~~g~~~f~~~~l~~~---~~~~~~~~~~~~~~li~f~vK~~~fP~H 236 (531)
T PRK02546 161 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPSFDMTHLAAK---DFGLGFQLLCYAGLLIAYGVKLPIVPLH 236 (531)
T ss_pred CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 0989-99999999999997779999999999999848737999999854---3562799999999999999850103451
Q ss_pred HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0121012210012333321000002321111124400011-222100000122210222200000124454435642111
Q gi|254780867|r 227 MWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305 (478)
Q Consensus 227 ~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~ 305 (478)
.|+||+|++||+|+|++++++++|+|.|+++|+.....+. ...+...+.++|++|+++|++.|++|+|+||++|||||+
T Consensus 237 ~WLPdA~~~aPt~~S~llagvl~K~G~Y~liR~~~~l~p~~~~~~~~~l~~lg~itii~gal~Al~Q~DiKrllAYSSIs 316 (531)
T PRK02546 237 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSIS 316 (531)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 26688877899067888889999874453499877641257888725999999999999999999873389999999999
Q ss_pred CCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 244211111121-5778888643002320100110000267874087645502104665232114789999865303665
Q gi|254780867|r 306 HAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIP 384 (478)
Q Consensus 306 q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlP 384 (478)
|+||+++|++.+ ..|..|+++|+++|++.|.++|+++|.+++|+| +||++|+||+.|+||.++.++.++.++++|+|
T Consensus 317 hmG~i~lGi~~~~~~g~~Gai~~~~~H~~~ka~LFl~~G~i~~r~g--t~~i~~lgGL~~~mP~~~~~f~i~~la~~GlP 394 (531)
T PRK02546 317 HMGFVLIGIGSFSDLGTSGAMLQMISHGLIGASLFFLVGATYDRTH--TLMLDEMGGVGQKMRKMFAMWTACSLASLALP 394 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999715999999999999999999999999818999739--61678718868775599999999999987342
Q ss_pred HHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------CCCCCCCCHHHHHHH
Q ss_conf 00006759999999996284------999999999999999999999999964998778------655673321899999
Q gi|254780867|r 385 PFAGFFGKYFLLISAVKREF------YVLAIVALLSSVISAYYYLRVISIMWFDQSTEC------VVVVAKEMRLFIFGS 452 (478)
Q Consensus 385 p~~GF~sK~~i~~~~~~~~~------~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~------~~~~~~~~~~~~~~~ 452 (478)
|++||+|||+++.+..+.+. ++.+.++..+.++++.|.+|.++++|+|+++++ ..|.+.++.....+.
T Consensus 395 ~~~GF~sk~lil~G~~~~~~~~~~~~~~~~~~a~~g~vl~a~Y~l~~~~rvf~G~~~~~~~~~~~~~dl~~rE~~~~~~l 474 (531)
T PRK02546 395 GMSGFVAELMVFVGFATDDAYTLPFRVVVVFLAAIGVILTPIYLLSMLREIFFGKENKELVSHENLVDAEPREVYIIACL 474 (531)
T ss_pred CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 02609999999972210454310699999999999999999999999999975999854343456878878899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999767658999998751
Q gi|254780867|r 453 ILFVTGYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~l 477 (478)
.+.++.+++||.++.+...+.++++
T Consensus 475 ~~~~~~~G~yP~~~l~~~~~~v~~l 499 (531)
T PRK02546 475 LVPIIGIGLYPKLVTQSYDATINQL 499 (531)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999758899870328899999
No 42
>CHL00011 ndhD NADH dehydrogenase subunit 4
Probab=100.00 E-value=0 Score=566.54 Aligned_cols=399 Identities=18% Similarity=0.276 Sum_probs=329.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
.+.+|.+|..+..+..+.+... ....++.++ ++++|+.++++...|+++++.|+|++++|+|||++++++|.||++
T Consensus 79 ~lgiDgLs~~lvlLt~~i~~l~---~l~s~~~~~-~~~~f~~l~L~~~~~~~G~~~s~dl~~~yvf~E~~~i~sy~LI~~ 154 (500)
T CHL00011 79 RLGIDGLSIGLILLTGFITTLA---TLAAWPVTR-NSRLFHFLMLAMYSGQIGLFSSQDLLLFFLMWELELIPVYLLLSM 154 (500)
T ss_pred EEEHHHHHHHHHHHHHHHHHHH---HHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8731687899999999999999---984043246-754999999999999999999753999999999999878751110
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC---CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2000134455555401462046799889885300---1000001222211101343100001222211234444432110
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYG---FTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~---~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
|++++ +.+|+.||++++.+|+.+++.|+..++. .++++|++++.+.... ..........+++|+++|+|+|||
T Consensus 155 ~g~~~-~~~aa~k~~l~t~~gs~~lL~gi~~l~~~~~~~~t~~~~~l~~~~~~---~~~~~~~~~~~ligf~vK~~~fP~ 230 (500)
T CHL00011 155 WGGKK-RLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYP---VALEILFYIGFLIAFAVKLPIIPL 230 (500)
T ss_pred CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 48889-99999999999988899999999999999854488899999844563---259999999999999985284546
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012101221001233332100000232111112440001-122210000012221022220000012445443564211
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
|.|+||+|++||+|+|+++|++.+|+|.|+++|+.....+ ....+...+.++|++|+++|++.|++|+|+||++|||||
T Consensus 231 H~WlPda~~~ap~~~s~llsg~~~k~g~y~l~R~~~~~~~~~~~~~~~~l~~lg~it~i~g~~~Al~Q~d~KrllAYSsi 310 (500)
T CHL00011 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSLFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSV 310 (500)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01167777789839999999999998887779850001423789999999999999999999999997017888898417
Q ss_pred CCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 1244211111121-577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
+|+||+++|++.+ +.|+.++++|+++|++.|.++|.++|.+++++| +||++|+||+.|+||.++.++.++.++++|+
T Consensus 311 s~~G~i~lg~~~~~~~g~~ga~~~~~~H~~~k~~LFl~~g~i~~~~g--t~~i~~lgGl~~~~P~~a~~~~i~~la~~G~ 388 (500)
T CHL00011 311 SHMGFIIIGIGSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIR--LLYLDEMGGIAIPMPKIFTMFSSFSMASLAL 388 (500)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHCCCCHHHHCHHHHHHHHHHHHHHCCC
T ss_conf 44889999998706889999899999999999999999999998158--7751403780766649999999999998168
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----CCCCCCHHHHHHH
Q ss_conf 50000675999999999628499------999999999999999999999996499877865-----5673321899999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYV------LAIVALLSSVISAYYYLRVISIMWFDQSTECVV-----VVAKEMRLFIFGS 452 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~------~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~-----~~~~~~~~~~~~~ 452 (478)
||++||+||++++++.++++.++ .+.+..+++++++.|++|.++++|+|+++++.+ +.+..+.......
T Consensus 389 P~~~GF~~k~~i~~g~~~~~~~~~~~~~~~~~i~~~g~il~a~Y~l~~~~~~f~g~~~~~~~~~~~~d~~~~e~~~~~~l 468 (500)
T CHL00011 389 PGMSGFVAELIVFFGIITSQKYLLMFKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICL 468 (500)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 75253889999999999716432578999999999999999999999999997799887665335668988899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999767658999998751
Q gi|254780867|r 453 ILFVTGYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~l 477 (478)
.+.++.++++|+++.+...+.++++
T Consensus 469 ~~~~i~~Gl~P~~~l~~~~~~v~~l 493 (500)
T CHL00011 469 LLPVIGIGIYPDFVLSLSVDKVEAI 493 (500)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999999837599999899999999
No 43
>PRK06589 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=568.97 Aligned_cols=455 Identities=19% Similarity=0.235 Sum_probs=355.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHH
Q ss_conf 7862999999999999999999986402301589999999999999999999713221--------00316764100799
Q gi|254780867|r 6 FINDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG--------IGLGGAYISDRFSY 77 (478)
Q Consensus 6 ~~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~--------~~~~~~~~~D~~s~ 77 (478)
..|+..++.|.+++....+.....++.++.++.......................... .+++..+++|++|.
T Consensus 7 ~~p~~ll~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~iD~ls~ 86 (484)
T PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATKKDSFIRNFLLITISIFFFGNILLIDLLFLKGIRAQFELMIFGNYSIGLHLEPLGL 86 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECHHHH
T ss_conf 45668999999999999999998188777899999999999999999999997237740689850688248977605569
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 9999999999999999999963210-022420667999999999987314610221245777887777665320001344
Q gi|254780867|r 78 FIKAILLMSSIIIFIKMFSCIYVKP-FSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSI 156 (478)
Q Consensus 78 ~~~~l~~~~~l~~~~~~~~~~~~~~-~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~ 156 (478)
.+..++...+..+.+|+.+|+++++ ++..||+.+++++..++.+++.|+|++++|++||++++++|.||++|+++ ++.
T Consensus 87 ~~~ll~~~v~~lv~iyS~~Ym~~~~~~~~~rf~~~~~l~~~~~~~lv~s~dL~~lfvf~El~~i~sy~LI~~~~~~-~~~ 165 (484)
T PRK06589 87 IFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLLTMFVCYELLTISTAFLIGHTRNN-ISL 165 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHH
T ss_conf 9999999999999999888731277777448999999999999999997069999999999999999999828988-999
Q ss_pred HHHHHHHCC-CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 555554014-6204679988988530010000012222111013431000012222112344444321100012101221
Q gi|254780867|r 157 EAALKYFVL-GAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 157 ~aa~ky~~~-~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
+++.||+.+ ++.|+.+++.|+.++|..+||+|+.+...... + ......++++|+..|+|+||+|.|+||||+
T Consensus 166 ~aa~ky~~~~~~~~~~~ll~gi~lly~~~gtl~~~~~~~~~~---~---~~~~~~ll~i~~~~K~a~fP~H~WLPdA~~- 238 (484)
T PRK06589 166 IGGYKYLKILMISALLLFLPAVILIYQKTGNLDFVSGGIFSK---N---QSIILLLMFIFGIAKTAIFPVHSWLPAAMV- 238 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C---HHHHHHHHHHHHHHHHHHCCCCCCCCHHCC-
T ss_conf 999999999999999999999999999983699998886321---0---899999999999999706678675221205-
Q ss_pred HCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCC-----CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00123333210-0000232111112440001122-----21000001222102222000001244544356421112442
Q gi|254780867|r 236 SPMFMTAFLAT-IPKFATTMALCRITSVFWPMLS-----GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGY 309 (478)
Q Consensus 236 ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~-----~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~ 309 (478)
+|+|+|+++|+ .++|+|+|.+.|+.....+... .....+.++|++|+++|++.|++|+|+||++|||||+|+||
T Consensus 239 aptpvsall~aa~~vkaGvy~l~R~~~~~f~~~~~~~~~~~~~~l~~lg~iTii~ga~~Al~Q~DlKrlLAYSsisq~Gy 318 (484)
T PRK06589 239 AHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSL 318 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 68679999999999999999999999996151268888999999999999999999999999888999998747877999
Q ss_pred CCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 111111215-7788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 310 ALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 310 i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
+++|++.++ .+..++++|+++|++.|.++|+++|.+++++| +||++|+||+.|+||+++.++.++.+|++|+||++|
T Consensus 319 i~lgi~~~~~~~~~gal~hli~Ha~~Ka~LFl~aG~i~~~~~--~~~i~~l~GL~~~~P~t~~~~~i~~lsl~GiPp~~G 396 (484)
T PRK06589 319 ALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKK--EDQVDKLHGISKSFPLISFMISISSLSLIGIPIFSG 396 (484)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999745477899999999999999999999999998058--635999679786648999999999999987666456
Q ss_pred HHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67599999999962849999----99999999999999999999964998778655673321899999999999999976
Q gi|254780867|r 389 FFGKYFLLISAVKREFYVLA----IVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIEN 464 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~~~~~----~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (478)
|+|||++++++++++.+|.. .+.++++++++.|++|+++.+|+++|+|+.+. +| .+..+....+.++...+..+
T Consensus 397 F~sK~~i~~a~~~~~~~~~~~~~~~~~~~~s~l~~~y~~ri~~~~f~~~~~~~~~~-~e-~P~~m~ip~~ila~~~il~~ 474 (484)
T PRK06589 397 FISKFSILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENVVT-KK-LPYSLQLSIIICAGATTLFY 474 (484)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999985981699999999999999999999999999968998544888-88-86837999999999999998
Q ss_pred HHHHHHHH
Q ss_conf 76589999
Q gi|254780867|r 465 ILNSSIMK 472 (478)
Q Consensus 465 ~~~~~~~~ 472 (478)
..++++.+
T Consensus 475 ~~~~~~~~ 482 (484)
T PRK06589 475 FIQILIRE 482 (484)
T ss_pred HHHHHHHH
T ss_conf 23887874
No 44
>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=566.33 Aligned_cols=404 Identities=22% Similarity=0.317 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+..++.|.+|..|..++..++.++.+|+.+|+.+++. ..|||.+++++..+|++++.|+|++++|+|||++++++|.|
T Consensus 71 l~~~lrlDgLs~lfalLi~~IG~lV~lYs~~Ym~~~~~-~~rFy~~lllF~~aMlGlVls~nll~lfvFWEltsl~SylL 149 (969)
T PRK12650 71 VNFALRADALSLFFALLALLIGAVVFIYSARYLHKGDG-NTSFYTLMTAFMAAILLLVLADDVVVLFIGWELVSLASFML 149 (969)
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 15999750778999999999999999996996689998-24499999999999999999740999999999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65320001344555554014620467998898853001000001222211101343100001222211234444432110
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
|+.++ +++.+++.||++++.+|+.+++.|+.++|..+||++++++........++........+++.|...|++||||
T Consensus 150 Ig~~~--~~ar~aA~kallvt~~Ggl~lL~gi~ll~~~tGt~~ls~il~~~~~~~~~~~~~~~~~Li~~gaf~KSAqfPf 227 (969)
T PRK12650 150 IARSG--SSGEAGSIRTLILTFIGGLTLLTALAIAVTQTGTTNLDAILHSPFWAEKPVLTGVIAVLIAMAAFTKSAQFPF 227 (969)
T ss_pred HHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 90697--4789999999999999999999999999999588309999831300346159999999999999988330543
Q ss_pred CHHHHHHHHHHCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00121012210012333321-00000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLA-TIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls-~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
|+||||||+ +|||+|+++| +.++|+|+|.+.|+.+.+. ..+.|...+.++|.+|+++|++.|++|+|+||++|||||
T Consensus 228 H~WLP~Am~-APTPVSA~LhSAtMVKaGvyll~R~~p~~~-~~~~w~~~l~~~G~~T~l~Ga~~Al~Q~DlKrlLAYSTV 305 (969)
T PRK12650 228 HFWLPEAMA-AATPVSAFLHAAAVVKAGIYLLLRFSGVFS-DVAVWNWLLIIVGMGTAIMGAFFAVQKTDLKKLTAYSTV 305 (969)
T ss_pred HHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 441550005-898299999999999999999999999860-029999999999999999999999977558999999989
Q ss_pred CCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 12442111111215-77888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
||+|||+++++.++ .+..++++|+++|++.|.++|+++|.+.+++| +||+++++|++|+||+++.++.++.+|++|+
T Consensus 306 SqLG~i~l~lGlgt~~a~~aal~hlv~HAlfKa~LFm~aG~I~h~tG--trdi~~LgGL~r~mP~t~~~~~iaalSmaGv 383 (969)
T PRK12650 306 SQLGWIVATIGVGTPFALTAAIVHTLAHALFKSSLFMLVGVIDHQTG--TRDIRRLGSLWRQMPFTFVSVVIAALSMAAV 383 (969)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999985786779999999999999999999998608899826--4169885786653699999999999998277
Q ss_pred CHHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHH
Q ss_conf 50000675999999999628-----4999999999999999999999999964998778655--6733218999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKRE-----FYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV--VAKEMRLFIFGSILFV 456 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~-----~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~ 456 (478)
||++||+||...+++..+.+ .+.+.....+++++++.|..|++...|+++|++..+. .+..+..........+
T Consensus 384 Pp~~GF~sKE~~~~a~l~~~~~~~~~~~~~~~a~~gs~lt~aYs~Rf~~~~F~~~p~~~~~~~e~p~~m~~p~~~La~l~ 463 (969)
T PRK12650 384 PPTFGFVSKEGMITAFMEAPIGNAGVVLLLVGAGLGALATFTYSARYVLGAFVDGPRDMSHVKEAPVSLWLPAALPGVLS 463 (969)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 62115999999999998564532189999999999999999999999997238999987788999815668999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999976765899999875
Q gi|254780867|r 457 TGYFLIENILNSSIMKIVMS 476 (478)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~ 476 (478)
+.++++|+....++.+.+.+
T Consensus 464 l~~G~~p~~~~~~l~~~a~~ 483 (969)
T PRK12650 464 LPAVLFLSLFDAPVSAAATA 483 (969)
T ss_pred HHHHHCHHHHHHHHHHHHHH
T ss_conf 99983416557889999987
No 45
>COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=0 Score=564.78 Aligned_cols=390 Identities=25% Similarity=0.378 Sum_probs=340.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
++..+.+|+++..+..++...+.++.+|+.+|+++++ +..|||.++.++..+|++++.|||++.+|++||.++++||.|
T Consensus 66 ~~~~~~iD~Ls~lm~~lVt~vg~LI~iYsi~YM~~d~-~~~RFfa~l~lF~~sMl~lVlSdNll~l~~~WE~~gl~SyLL 144 (606)
T COG1009 66 LNFGLRIDGLSLLMALLVTGVGFLIHLYSIGYMSHDP-GLGRFFAYLLLFTGSMLGLVLSDNLLLLFVFWELTGLASYLL 144 (606)
T ss_pred CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 3168997567899999999999999999799824599-857099999999999999998285999999999999998872
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC-CCCHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6532000134455555401462046799889885300100-00012222111--01343100001222211234444432
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG-CTGFSQIATSL--FIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g-s~~~~~l~~~~--~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|++|.+|+++.++|.|.++++++||..++.|+..+|..+| +.+.+++.+.. .+..+ ........+++.|...|+||
T Consensus 145 IGfw~~~~~a~~aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~~~~~~~~~~~-~~~~~~~lll~~Ga~~KSAQ 223 (606)
T COG1009 145 IGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELFAAALFADISP-PLLTLILLLLLLGAFGKSAQ 223 (606)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCC-HHHHHHHHHHHHHHHHHHCC
T ss_conf 00026985366999887430112689999999999999576301788862110112111-28999999999986366330
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 110001210122100123333210-0000232111112440001122210000012221022220000012445443564
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAY 301 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAy 301 (478)
||||.||||||| +||||||++|+ .++++|+|.+.|..+.+.. .+.+...+..+|.+|+++|+..|++|+|+||++||
T Consensus 224 fPfH~WLpdAMe-gPTPVSAliHaATMV~AGvyLvaR~~pif~~-sp~~~~~v~~vG~iTal~~a~~al~Q~DiKriLAY 301 (606)
T COG1009 224 FPFHTWLPDAME-GPTPVSALLHAATMVKAGVYLLARLSPLFAL-SPEALWLVILVGAVTALLAALIALVQNDIKRILAY 301 (606)
T ss_pred CCHHHHHHHHHC-CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 603765536644-8984999999868897162579688787535-78999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 21112442111111215778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 302 SSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 302 Ssi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||+||+|||.+++|.+..+..++++|+++|++.|..+|+++|.+.+++++ ||++|+||++|+||.+..++.++.++++
T Consensus 302 STiSQLG~m~~a~Glg~~a~~aAifHL~tHA~FKA~LFL~aG~vih~~~t--rdi~kmggL~k~mPit~~~~~ig~lala 379 (606)
T COG1009 302 STISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHATGT--RDIRKLGGLRKKMPITFVAFLIGALALA 379 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC--CCHHHHHCHHHHCHHHHHHHHHHHHHHH
T ss_conf 88999999999984427799999999999999999999841503887165--4088741678766399999999999981
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf 66500006759999999996284---99999999999999999999999996499877865--56733218999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREF---YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV--VVAKEMRLFIFGSILFV 456 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~---~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~ 456 (478)
|+||++||+||..+++++++.+. ++...+..++++.++.|..|++...|.||++++.+ +..|.+..+..+..++.
T Consensus 380 GvpPf~GF~SK~~i~~~~~~~~~~~~~~~~~~~~i~~~~T~~ys~r~~~~~F~g~~~~~~~~~~~he~p~~m~lp~~iL~ 459 (606)
T COG1009 380 GVPPFAGFFSKDMILEAALAASHLSGGLLLLLALIGALLTAFYSFRLIFLVFFGKPREPEELPHAHEAPWVMLLPLVVLA 459 (606)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 78732069999999999997254333389999999999999999999995147899874446677889810459899999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780867|r 457 TGYFL 461 (478)
Q Consensus 457 ~~~~~ 461 (478)
+...+
T Consensus 460 ~~s~~ 464 (606)
T COG1009 460 ILSLI 464 (606)
T ss_pred HHHHH
T ss_conf 99999
No 46
>PRK08676 hydrogenase membrane subunit; Validated
Probab=100.00 E-value=0 Score=565.74 Aligned_cols=429 Identities=21% Similarity=0.316 Sum_probs=354.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCCCHHHHHHHH
Q ss_conf 99999999999999713221003-16764100799999999999999999999996321-------00224206679999
Q gi|254780867|r 44 FPVCLLSIALFFLLIMPYEGIGL-GGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVK-------PFSCFEFPVIMLMA 115 (478)
Q Consensus 44 ~~~~~l~i~l~~~~~~~~~~~~~-~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~-------~~~~~~f~~l~l~~ 115 (478)
.+.......+......+.++... +..+.+|++|..+..++...+....+++.+|++++ +++.++||.++.++
T Consensus 31 ~~l~~~~~sl~~l~~~~~~~~~~~~~~~~iD~Ls~~~l~l~~~v~~l~~lyS~~Ym~~~~~~~~~~~~~~~~fy~l~~l~ 110 (486)
T PRK08676 31 HGLWHLGLSLYVLLVLPLPGYFMESRYLFIDHLGLFVVLIASLIFILAALYARGYVDHLLESGELDPENLKVFYLGFNLL 110 (486)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999997356421003572221666169999999999999999988885114102456875466999999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC------CCCCH
Q ss_conf 999999873146102212457778877776653200013445555540146204679988988530010------00001
Q gi|254780867|r 116 VLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT------GCTGF 189 (478)
Q Consensus 116 ~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~------gs~~~ 189 (478)
..++++++.|+|++++|++||++++++|.||++|++ +++.||+.||++++.+|+.+.++|+.++|..+ ||+|+
T Consensus 111 ~~~m~~~~~s~nl~~fyvf~E~~~i~s~~LI~~~~~-~~~~~Aa~ky~~~~~~~~~~~l~g~~~l~~~~~~~~~~gtl~~ 189 (486)
T PRK08676 111 LSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSA-RENIDAALKYIFIASTAMIFAFIGLIFLFELTRQALGTGTLNW 189 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 999999999958999999999999999999975798-9999999999999999999999999999999998725786039
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC--C
Q ss_conf 22221110134310000122221123444443211000121012210012333321000002321111124400011--2
Q gi|254780867|r 190 SQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM--L 267 (478)
Q Consensus 190 ~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~--~ 267 (478)
+++....... ++.....+..++++|+++|+|++|||.|+||||++||+|+|+++|++++|+|+|+++|+.....+. .
T Consensus 190 ~~l~~~~~~~-~~~~~~~~~~l~ligf~~K~~~~PfH~WLPdA~~eAPtpvSalLsavl~k~G~y~i~R~~~~~~~~~~~ 268 (486)
T PRK08676 190 TELAAHASLL-SPGMLGASFLFIFIGFAAKSGIVPFHTWLPAAYAKAPSAVSAVLSGTVLNIGIYGILRMSALLRQSGAA 268 (486)
T ss_pred HHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 9999763137-858999999999999999871512156506766789947999999999999999999999986230248
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHH
Q ss_conf 221000001222102222000001244544356421112442111111215-7788886430023201001100002678
Q gi|254780867|r 268 SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLR 346 (478)
Q Consensus 268 ~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~ 346 (478)
+.+..++.++|++|+++|++.|++|+|+||++|||||+|+||+++|++.++ .+..++++|+++|++.|.++|.++|.++
T Consensus 269 ~~~~~~l~~lg~~tii~g~~~Al~Q~DlKrlLAYSSIshmG~i~lg~~~gt~~~~~gal~~~i~H~l~k~~LFl~aG~i~ 348 (486)
T PRK08676 269 EQVSNVLIVFGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWALFHMLAHSLVKAGLFFSAGILH 348 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999871167999997999999999999967399999999999999999999999999999
Q ss_pred HHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74087645502104665232114789999865303665000067599999999962849999999999999999999999
Q gi|254780867|r 347 RKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVI 426 (478)
Q Consensus 347 ~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~ 426 (478)
++++ +||++|+||+.|++|.++.++.++.+|++|+||++||+|||+++.+..+.+ +|+..+..+.+.++..++.|..
T Consensus 349 ~~~g--t~~i~~l~GL~~~mP~~a~~~~i~~lsl~GlPP~~gF~sK~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (486)
T PRK08676 349 RQYR--SDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGAIS-VWLVLAVLLLLLLAASSFANFL 425 (486)
T ss_pred HHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9749--976998659886638999999999999987767545999999999999876-7999999999999999999999
Q ss_pred HHHHCCCCCCCC---CC---CCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHC
Q ss_conf 999649987786---55---6733218999999999999999-767658999998751
Q gi|254780867|r 427 SIMWFDQSTECV---VV---VAKEMRLFIFGSILFVTGYFLI-ENILNSSIMKIVMSL 477 (478)
Q Consensus 427 ~~~f~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 477 (478)
...|.+...++. ++ .+..+...+......++.++++ |..+.++++++++.+
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~p~~m~~p~~iLa~l~l~lGv~~p~~l~~~l~~~~~~l 483 (486)
T PRK08676 426 LKAFTRSTPEEENRDPVPYRTPLSMKVPIVILLALVLALGVYFPPGLADFLDQIVKEL 483 (486)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999557788777888877686318999999999999999664467999999999983
No 47
>MTH00020 ND5 NADH dehydrogenase subunit 5; Reviewed
Probab=100.00 E-value=0 Score=559.06 Aligned_cols=434 Identities=18% Similarity=0.245 Sum_probs=345.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHH--HHHCCCC-------------HHHHHHHHHHHHHHHH
Q ss_conf 999999999999986402301589999999999-99999999--9713221-------------0031676410079999
Q gi|254780867|r 16 EIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCL-LSIALFFL--LIMPYEG-------------IGLGGAYISDRFSYFI 79 (478)
Q Consensus 16 ~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-l~i~l~~~--~~~~~~~-------------~~~~~~~~~D~~s~~~ 79 (478)
.+.|.++++.....++..+++............ ........ .....+. ...+..+..|.++..+
T Consensus 6 i~~Pli~a~i~~l~gr~~~~~~~~~i~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~D~ls~~~ 85 (608)
T MTH00020 6 LFFPLVGAVLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILLNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIM 85 (608)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEHHHHHHH
T ss_conf 99999999999982776684089999999999999999999999973898169987652122771527877507659999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 99999999999999999963210022420667999999999987314610221245777887777665320001344555
Q gi|254780867|r 80 KAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAA 159 (478)
Q Consensus 80 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa 159 (478)
..++...+..+.+|+.+|++++++ ..||+.+++++..+|++++.|+|++++|++||.+++++|.||++|++|+++.+|+
T Consensus 86 ~~~v~~is~lv~iYS~~Ym~~d~~-~~rf~~~l~lF~~~Ml~lv~s~nl~~lfvgWE~~gl~SylLI~~~~~~~~a~~aa 164 (608)
T MTH00020 86 LLVVTTISTLVHIFSTAYMRGDPH-IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAA 164 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 999999999999999998467998-1289999999999999999971699999999999999988572316876899999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 55401462046799889885300100000122221110134310000122221123444443211000121012210012
Q gi|254780867|r 160 LKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMF 239 (478)
Q Consensus 160 ~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~ 239 (478)
.||++++++||..++.|+..+|..+||+|++++.+...... .......++++|...|+||+|||.||||||| +|||
T Consensus 165 ~ka~l~~rvGd~~~l~~i~~l~~~~gt~~~~~i~~~~~~~~---~~~~~~~~l~~g~~~KsAq~P~h~WLP~Am~-aPTP 240 (608)
T MTH00020 165 IKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVAPSS---DITLICLLLFIGAVGKSAQLGLHTWLPDAME-GPTP 240 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC-CCCC
T ss_conf 99999998658999999999999827806999998734332---5899999999999998640755020456645-8997
Q ss_pred CCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 33332100-00023211111244000112221000001222102222000001244544356421112442111111215
Q gi|254780867|r 240 MTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM 318 (478)
Q Consensus 240 ~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~ 318 (478)
+||++|+. ++++|+|.++|..+.+. ..+.....+.++|.+|+++|++.|+.|+|+||++||||+||+|||++++|.+.
T Consensus 241 vSALlhaatmV~aGvyll~R~~~~~~-~~~~~~~~~~~iG~~T~~~~~~~Al~Q~DiKkilAyST~SQlG~m~~~~gl~~ 319 (608)
T MTH00020 241 VSALIHAATMVTAGVFLLIRSSPLFD-QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH 319 (608)
T ss_pred HHHHHHHHHHHHHHHHEEEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
T ss_conf 05889889999744731353054101-27789999999999999999999997877888762033868889999850140
Q ss_pred HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 77888864300232010011000026787408764550210466523211478999986530366500006759999999
Q gi|254780867|r 319 LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLIS 398 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~ 398 (478)
..++++|.++|++.|..+|+++|.+.+.. +++||++|+||+.|+||.++.++.++.+|++|+||++||+||+.+++.
T Consensus 320 --~~~a~fHl~~Ha~fKalLFl~aG~vih~~-~~~qdi~~mggl~~~mP~t~~~~~i~~lal~G~P~~~GF~SKd~ile~ 396 (608)
T MTH00020 320 --YSISLFHLMNHAFFKALLFLSAGSVIHAL-SDEQDIRKMGGLISFLPLTYIMFVIGSLSLMGFPYLTGFYSKDLILEL 396 (608)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf --87889999999999999998435999834-685038884794134839999999999998454124089879999999
Q ss_pred HHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHH
Q ss_conf 9962849999-9999999999999999999996499877865---5673321899999999999
Q gi|254780867|r 399 AVKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 399 ~~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 458 (478)
.++++..... .+..+++.+|..|..|.+...|+++++.+.. +..|+...+..+..++.++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~lT~~y~~R~~~~~f~g~~~~~~~~~~~~hE~~~~M~~Pl~iLa~~ 460 (608)
T MTH00020 397 AFGQYYLIFAYWLGCFSALLTALYSIRLIYLTFLSNTNLKRAVFFFLHEGSWNLLLPLGILALG 460 (608)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9866269999999999999999999999999994799999765556676878999999999999
No 48
>MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=556.62 Aligned_cols=419 Identities=18% Similarity=0.234 Sum_probs=337.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHH--HHHHHHHCCCC-------------HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999864023015899999999999-999--99999713221-------------0031676410079999
Q gi|254780867|r 16 EIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLL-SIA--LFFLLIMPYEG-------------IGLGGAYISDRFSYFI 79 (478)
Q Consensus 16 ~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l-~i~--l~~~~~~~~~~-------------~~~~~~~~~D~~s~~~ 79 (478)
.++|.++++.....++..+++............. ... .........+. ...+..+..|.++..+
T Consensus 6 i~lPl~~~~i~~~~gr~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~D~ls~~m 85 (677)
T MTH00032 6 LLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDTLSVTM 85 (677)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEHHHHHHH
T ss_conf 99999999999985052560357999999999999999999999955897389998543345676525787752117999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 99999999999999999963210022420667999999999987314610221245777887777665320001344555
Q gi|254780867|r 80 KAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAA 159 (478)
Q Consensus 80 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa 159 (478)
..++...+..+.+|+.+|++++++. .||+.++.++..+|++++.|+|++++|++||.+++++|.||++|++|+++.+|+
T Consensus 86 ~~~v~~is~lv~iYS~~Ym~~d~~~-~rf~~~l~lF~~~Ml~lV~s~nl~~lfigWE~vgl~SylLI~~~~~r~~a~~aa 164 (677)
T MTH00032 86 LLVISSISTLVHIYSTSYMSDDPHV-PRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAA 164 (677)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 9999999999999968873799985-179999999999999999956199999999999999897606268847899999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC--------------CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 554014620467998898853001000001222211101--------------343100001222211234444432110
Q gi|254780867|r 160 LKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFI--------------GHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 160 ~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~--------------~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
+|++++|++||..+++|+..+|...||+|++++...... ............++++|...|+||+|+
T Consensus 165 ~ka~i~nrvGd~~~l~gi~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ga~~KSAq~pl 244 (677)
T MTH00032 165 IKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGYGEGGAYESPLAPFAIIGILLLIGCIGKSAQLGL 244 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999850769999999999999967742998765542256654335543320142268999999999999887410616
Q ss_pred CHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012101221001233332100-000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
|.||||||| +|||+||++|+. ++++|+|.+.|..+.+.. .+.....+.++|.+|+++|+..|+.|+|+||++||||+
T Consensus 245 h~WLPdAMe-gPTPVSALiHaatmV~AGvyll~R~~pl~~~-~~~~~~~i~~~G~~T~~~~a~~al~Q~DiKrilAyST~ 322 (677)
T MTH00032 245 HTWLPDAME-GPTPVSALIHAATMVTAGVFLMIRSFPLFEK-APLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTC 322 (677)
T ss_pred CHHCHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 220678755-8996047887999999899999997403443-19999999999999999999999877315588887368
Q ss_pred CCCCCCCCCCCC-HHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 124421111112-1577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFST-GMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
+|+|||++++|. +. ...+++|.++|++.|..+|+++|.+.+..++++||++|+||+.|+||.+..+++++.+|++|+
T Consensus 323 SQlGym~~~~Gl~g~--~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~~qd~r~mGgl~~~mP~t~~~~~i~~lal~G~ 400 (677)
T MTH00032 323 SQLGYMVLIIGIEGS--HNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400 (677)
T ss_pred HHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 889999999722207--999999999899999999970228887047435689985897345649999999999998068
Q ss_pred CHHHHHHHHHHHHHHHHHCC-------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 50000675999999999628-------------------------------------49999999999999999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKRE-------------------------------------FYVLAIVALLSSVISAYYYLRVI 426 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~-------------------------------------~~~~~~~~~~~s~~s~~y~~~~~ 426 (478)
||++||+||+.|+|.++.++ ..+.-.+..+++.+|+.|..|++
T Consensus 401 P~~~GF~SKd~ile~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aa~LTa~YS~RLi 480 (677)
T MTH00032 401 PYLTGFYSKDLILELTYSGRNMGIPFGSSLLSIEGDIEIKKGGIRPWGGAGLSPSRGSAFAFWLGTVAALLTAFYSIRLV 480 (677)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62011420799999998601345431110011110000012221100000013340249999999999999999999999
Q ss_pred HHHHCCCCCCCCC
Q ss_conf 9996499877865
Q gi|254780867|r 427 SIMWFDQSTECVV 439 (478)
Q Consensus 427 ~~~f~~~~~~~~~ 439 (478)
...|+++|+.+.+
T Consensus 481 fltF~g~pn~~~~ 493 (677)
T MTH00032 481 YITFIISPNSPKE 493 (677)
T ss_pred HHHHHCCCCCCCC
T ss_conf 9998168999976
No 49
>PRK12668 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=560.64 Aligned_cols=427 Identities=19% Similarity=0.282 Sum_probs=338.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999998640230158999999999999999999971322----10031-6764100799999999999
Q gi|254780867|r 12 LCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYE----GIGLG-GAYISDRFSYFIKAILLMS 86 (478)
Q Consensus 12 lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~----~~~~~-~~~~~D~~s~~~~~l~~~~ 86 (478)
.+.|.+++.++++.++... ++.+.. .......+..........+.. ..+++ ..+++|++|..+..+..+.
T Consensus 5 ~l~P~l~~iigAlllpfl~---~~~r~~--~~l~~p~l~~~~~l~~~~g~~~~~~~lg~~l~~~rvD~LS~~Fali~~ii 79 (569)
T PRK12668 5 FLPPALLFIAGALLLPFLP---GRLRHA--LLLLIPVLAVLAVWTVPPGTHLTVTFLGFTLVLVRVDKLSRVFGLIFGIM 79 (569)
T ss_pred CCCHHHHHHHHHHHHHHCC---CHHHHH--HHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEECHHHHHHHHHHHHH
T ss_conf 4588999999999999811---159999--99999999999999575776640455344788887657689999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
Q ss_conf 99999999999632100224206679999999999873146102212457778877776653200013445555540146
Q gi|254780867|r 87 SIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLG 166 (478)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~ 166 (478)
+....+|+... +++ . .+...++...++++++.|+|++++|+|||++++++|.||. +++++++.+|++||++++
T Consensus 80 ~~l~~lYs~~~----~~~-~-~~~~~lly~g~~lGvv~a~Dl~~lfvfwEl~sl~S~~LI~-~~~~~~a~~Aa~kYli~~ 152 (569)
T PRK12668 80 AFIGVLYALHV----KDR-G-QHVAALLYVGSALGAVFAGDLLTLFVFWELMAIASTFLVW-ARGTPEAYRAGFRYLLVH 152 (569)
T ss_pred HHHHHHHHHHC----CCH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHH
T ss_conf 99999998531----766-7-8999999999999999982499999999999999999862-279867789999999999
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 20467998898853001000001222211101343100001222211234444432110001210122100123333210
Q gi|254780867|r 167 AFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLAT 246 (478)
Q Consensus 167 ~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~ 246 (478)
.+|+.+++.|+.++|..+||+|++++.... ..+..++++|++.|+|++|||.|+||+|+++|+++|+++|+
T Consensus 153 ~~G~~~lL~Gi~lly~~tGsl~~~~~~~~~---------~~~~~LiliGf~~Kaa~~P~H~WLPdAy~~at~~~s~llSa 223 (569)
T PRK12668 153 VLGGVLLLAGILLYYAETGSLAFGSIGGGG---------SLAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSA 223 (569)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHH---------HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHH
T ss_conf 878999999999999980982099876014---------79999999999998465754655300146886599999999
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHH
Q ss_conf 000023211111244000112221000001222102222000001244544356421112442111111215-7788886
Q gi|254780867|r 247 IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMV 325 (478)
Q Consensus 247 ~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~ 325 (478)
.++|+|+|.+.|.++. .+++.++|.+|+++|+++|+.|+|+||++|||||+|+|||++|++.++ .++.+++
T Consensus 224 ~~vK~gvY~l~R~~~g--------~~~l~~lG~it~~~g~~~Al~Q~DlKRlLAYStvsQlGym~~giGigt~la~~ga~ 295 (569)
T PRK12668 224 FTTKTAVYALARAFPG--------TELLIYIGAAMALYGVIYALLENDLRRLLSYHIVSQVGYMVAGVGIGTALAINGAV 295 (569)
T ss_pred HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 9999999999999742--------79999999999999999999872289999998998999999999735198999999
Q ss_pred HHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 43002320100110000267874087645502104665232114789999865303665000067599999999962849
Q gi|254780867|r 326 RYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFY 405 (478)
Q Consensus 326 ~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~ 405 (478)
+|+++|++.|.++|+++|.+.+++| +||++|+||+.|+||+++.++.++.+|++|+|||+||+|||++++++.+++..
T Consensus 296 ~H~~nHa~~KalLFm~aGaV~~~tg--t~~i~~lgGL~k~MP~t~~~~~igalsi~GvPpfsGF~SK~mI~~aa~~~~~~ 373 (569)
T PRK12668 296 AHAFNHILYKGLLFMSAGAVLYRTG--TEKLTELGGLYKSMPLTTVFCIVGALSISAFPLFSGFVSKSMIISAAGEGHLD 373 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
T ss_conf 9999999999999998769989818--70389949933221899999999999987262304999999999998867967
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999-999999964998778-65567332189999999999999997676589
Q gi|254780867|r 406 VLAIVALLSSVISAYYY-LRVISIMWFDQSTEC-VVVVAKEMRLFIFGSILFVTGYFLIENILNSS 469 (478)
Q Consensus 406 ~~~~~~~~~s~~s~~y~-~~~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (478)
+......++++.++.++ +|+.+..|++|++++ +++.+..+...+....++|+..+++|.++.+.
T Consensus 374 ~~~~~l~~as~g~f~~~~~k~~~~~F~~~~~~~~~~e~p~~m~~~m~ila~lci~~G~~p~~l~~~ 439 (569)
T PRK12668 374 WVWLMLLFASAGTFLHAGIKFPYFAFFGHDSGLRAKDAPRNMLAAMGIAAALCIAIGVYPQALYAL 439 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 999999999999999999988883140689998889999889988999999997300576878975
No 50
>PRK12561 NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Probab=100.00 E-value=0 Score=558.77 Aligned_cols=402 Identities=17% Similarity=0.254 Sum_probs=337.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+-.+.+|.+|..+..+..+.+.....++ ++. +++.++||.+++++..++++++.|+|++.+|++||++++++|+|
T Consensus 51 i~~~lgvDglSl~~vlLt~~l~~l~i~~s---~~~-~~~~~~f~~l~Ll~~~~mlGvf~s~Dll~fyvfwE~~lipsy~L 126 (495)
T PRK12561 51 LEWSLGVDGLSAPLVLLSGLVTTLSIAAS---WKV-TRKPRLFFFLLLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126 (495)
T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHH---CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86999623645999999999999999852---233-67631899999999999999999836999999999999999896
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6532000134455555401462046799889885300100--00012222111013431000012222112344444321
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG--CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g--s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
|+.|+++ ++.+|+.||++++.+|+.++++++..++..+| |+|+.++.... ............+++|+++|+++|
T Consensus 127 I~~wg~~-~r~~Aa~k~~l~t~~Gs~~~L~~~~~l~~~~g~~t~~~~~l~~~~---~~~~~~~~~~~~~li~f~iK~~~f 202 (495)
T PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASLFILIAGLALALSGDTFTFDLTELGAKS---YPLALELLAYAGFLIAFGVKLPIF 202 (495)
T ss_pred HHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5617987-999999999999999999999999999998565069999998646---335899999999999999862003
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1000121012210012333321000002321111124400011-222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.|+||+|++||+|+|++++++++|+|.|+++|+.....+. ...+...+.++|++|+++|++.|++|+|+||++|||
T Consensus 203 PfH~WLPdA~~eAPt~vS~lLagvl~K~G~YgliR~~~~l~p~~~~~~~~~l~~lg~itii~gal~Al~Q~DlKrllAYS 282 (495)
T PRK12561 203 PLHTWLPDAHGEASAPVSMLLAGVLLKMGGYALIRFNVQMLPDAHIYFAPALIILGIVNIIYGALNAFAQDNVKRRLAYS 282 (495)
T ss_pred CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46111156667799437788899999987423355444305326888889999999999999999999985687899893
Q ss_pred CCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 111244211111121-5778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 303 SIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 303 si~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||+|+||+++|++.+ ..|+.|+++|+++|++.|.++|+++|.+++|++ +||++++||+.|+||.++..+.++.++++
T Consensus 283 SIShmG~i~lGi~~~~~~g~~Gai~~mi~Hgl~ka~LFl~aG~i~~r~~--tr~i~~lgGL~~~mP~~~~~f~i~~la~~ 360 (495)
T PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTH--TLSIPNMGGLAKVMPKTFALFTASSLASL 360 (495)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 6989999999988758999998999999999999999999738998449--56699968965431899999999999997
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC------CCCCCCCHHHH
Q ss_conf 665000067599999999962849------999999999999999999999999649987786------55673321899
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFY------VLAIVALLSSVISAYYYLRVISIMWFDQSTECV------VVVAKEMRLFI 449 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~------~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~------~~~~~~~~~~~ 449 (478)
|+||++||+||++++.+.++++.+ ..++++.++.++++.|++|.++++|+|+++++. +|.+..+....
T Consensus 361 GlP~~~GF~se~lIl~G~~~~~~~~~~~~~~~~~~a~~g~ilta~Y~l~~~~rvf~G~~~~~~~~~~~~~dl~~rE~~~~ 440 (495)
T PRK12561 361 ALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGLILTPIYLLSMLRRVFYGPRSELIPALAVVEDAKPRELFIA 440 (495)
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 40220609999999999986053113689999999999999999999999999713899766654445878878799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999767658999998751
Q gi|254780867|r 450 FGSILFVTGYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l 477 (478)
.+..+.++.+++||+++.+...+.+.++
T Consensus 441 ~~l~~~~~~~G~yP~~~l~~~~~s~~~l 468 (495)
T PRK12561 441 LSLLVPILGIGFYPKLATQLYDVKTVAL 468 (495)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999999748899996647889999
No 51
>PRK08042 formate hydrogenlyase subunit 3; Reviewed
Probab=100.00 E-value=0 Score=550.72 Aligned_cols=399 Identities=14% Similarity=0.216 Sum_probs=341.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
......+++|++|.+|..++...+..+.+|+.+| ++|++.++++.++.++..+|.+++.++|+++++++||++++++|
T Consensus 50 p~~~~~~rlD~LSa~fllvi~~vg~~v~lYS~gY--~~~~~~~~~~~~~~Lf~asM~~vvlA~nl~~f~vfwElmsL~Sy 127 (593)
T PRK08042 50 SLVSYDVQITPLNAIWLITLGLCGLFVSLFNIDW--HRHAQVKANGLLINLLMAAAVCAVVASNLGMFVVMAEIMALCAV 127 (593)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHH--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8886356766778999999999999999991712--11666551479999999999999999779999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
+||+ + .+++.||++++++|+.+++.++.++|..+||+|++++.....+.+. ....+.+.++||+.|+|++
T Consensus 128 fLV~---~----~~ag~~yf~~~~iG~~~ll~g~~ll~~~~Gsl~f~~~~~~~~~~~~---~~~v~ll~liGFg~Kagl~ 197 (593)
T PRK08042 128 FLTG---N----SKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRAQQLPL---GSDIWLLGVIGFGLLAGII 197 (593)
T ss_pred HHHH---C----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHC
T ss_conf 9986---4----2332999999999999999999999999678019988743024542---7899999999999986144
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001210122100123333210000023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
|+|.|+||+|+++|+|+|+++|++++|+|+|+++|+.....+....+..++.++|.+|+++|+++|+.|+|+||++||||
T Consensus 198 PLH~WLPdAh~~APs~vSaL~SgvmvKvGvYgliR~~~~~~~~~~~~g~lll~lG~iTal~G~l~Al~Q~DlKRlLAYSS 277 (593)
T PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277 (593)
T ss_pred CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 26121010016786899999999999999999999998615516799999999999999999999998888999999988
Q ss_pred CCCCCCCCCCCCCH------------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
Q ss_conf 11244211111121------------577888864300232010011000026787408764550210466523211478
Q gi|254780867|r 304 IGHAGYALIGFSTG------------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTC 371 (478)
Q Consensus 304 i~q~G~i~~~l~~~------------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~ 371 (478)
|+|+|||++|++.+ ..++.++++|+++|++.|..+|+.+|.+.+++|+ ||++|+||+.|+||+++.
T Consensus 278 IsqiGyIllglG~~~~~~a~~~~~l~~lgl~gal~HllnHalfKalLFL~AG~V~~~tgt--~di~~lGGL~k~MP~ta~ 355 (593)
T PRK08042 278 LENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGH--RDIEKLGGIGKKMPVISI 355 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHCCHHHHHHHHHH
T ss_conf 999999999999855422114214578899999999999999999999999999999685--538894897555579999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 999986530366500006759999999996284----------9999999999999999999999999649987786556
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF----------YVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVV 441 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~----------~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~ 441 (478)
+++++.+|++|+||++||+|||+++++.++... +..+....+.+.++..++.|.+...|+|+|+++....
T Consensus 356 ~flIgalAiaGlPPlnGFvSewli~qs~f~~~~~~~~~~~~~~~l~~~~lal~~aLa~~~fvK~~gv~FlG~pRs~~a~~ 435 (593)
T PRK08042 356 AMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN 435 (593)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
T ss_conf 99999999805887355999999999998467774189999999999999999999999999998874227999823315
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73321899999999999999976765899999875
Q gi|254780867|r 442 AKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMS 476 (478)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (478)
.+|....+.......+..|+..+..+.++.|....
T Consensus 436 a~e~p~~m~~~m~~LA~~c~~~g~~~~~~~p~~~~ 470 (593)
T PRK08042 436 ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSA 470 (593)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 66797767899999999999970457888999831
No 52
>MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=544.89 Aligned_cols=428 Identities=17% Similarity=0.233 Sum_probs=362.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHH
Q ss_conf 30158999999999999999999971322100316764100799999999999999999999996321002-24206679
Q gi|254780867|r 34 RRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFS-CFEFPVIM 112 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~-~~~f~~l~ 112 (478)
+++..+......................+....+..+..|.+|..+..+....+.....++.++.++++.+ ++.|+.+.
T Consensus 19 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~lS~~l~~L~~~i~~l~~l~S~~~~~~~~~~~~~~f~~l~ 98 (452)
T MTH00206 19 KKKWLWRSTYVSSLLLALLVLLLWSMNMSWSSPNSYLSIDQVSAPLVILSCWLLPLMLLASQQHMKKEPGSRQRIYIFCL 98 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 76999999999999999999998723777010337885557579999999999999999989987408312789999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 99999999987314610221245777887777665320001344555554014620467998898853001000001222
Q gi|254780867|r 113 LMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQI 192 (478)
Q Consensus 113 l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l 192 (478)
++...++.+++.|+|++.+|++||.+++++|.||+.|++++++.+|+.||++++.+|+..++.|+..+|..+|+.|++++
T Consensus 99 ~~l~~~l~~~f~s~nl~~ffvf~E~~lip~~~LI~~wg~~~~r~~A~~~~~i~t~~gs~~lL~~i~~l~~~~gs~~~~~~ 178 (452)
T MTH00206 99 IFLQLFLILAFLATDLLLFYIAFEATLIPTLLLITRWGAQKERLQAGTYFLFYTLVGSLPLLIALLKLYNSLGSLSMPII 178 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 99999999999997999999999999999999999709988999999999999999999999999999988271489999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21110134310000122221123444443211000121012210012333321000002321111124400011222100
Q gi|254780867|r 193 ATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLP 272 (478)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~ 272 (478)
.+...+.... ....+++.|+++|+|++|+|.|+||||+|||+|+|++++++.+|+|.|+++|+.+...+....+..
T Consensus 179 ~~~~~~~~~~----~~~~~~~l~f~vK~~~~pfH~WLP~Ah~eAP~~~S~iLagvllK~G~ygliR~~~~~~~~~~~~~~ 254 (452)
T MTH00206 179 LENLSSYSDN----FWWLACLLAFLVKLPLYGLHLWLPKAHVEAPIAGSMVLAGVLLKLGGYGMMRLSQLLGPSTKLSSE 254 (452)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9884666899----999999999999987861001068777889809999999999999999999998712431589999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCC
Q ss_conf 000122210222200000124454435642111244211111121-5778888643002320100110000267874087
Q gi|254780867|r 273 IFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN 351 (478)
Q Consensus 273 ~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~ 351 (478)
.+..+|++|+++|++.|++|+|+||++|||||+|+|+++.|++.+ +.|..++++|+++|++.|.++|..++.+++++|
T Consensus 255 ~~~~l~~~~~~~~s~~al~Q~DlKrllAYSSishmG~i~~gl~~~~~~g~~gal~~mi~Hgl~~~~LF~~~g~i~~~~~- 333 (452)
T MTH00206 255 PFLILGLWGMIVTSSICLRQTDLKSLIAYSSVSHMGLVAAGIMSGTPWGFSGALMLMIAHGLVSSALFCLANLLYERSH- 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf 9999999999999999998733789999967999999999997378888888899889999999999999889993349-
Q ss_pred CCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64550210466523211478999986530366500006759999999996284999999999999999999999999964
Q gi|254780867|r 352 NIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWF 431 (478)
Q Consensus 352 ~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~ 431 (478)
+||++++||+.|++|.++.++.++.++++|+||++||+||++++.+.++.+ ++..++..+++++++.|++|.+...+.
T Consensus 334 -tr~i~~~~GL~~~~P~~~~~~~i~~ls~~GiPp~~gF~se~~i~~~~~~~~-~~~~~~~~~~~~lsa~Y~l~l~~~~~~ 411 (452)
T MTH00206 334 -TRTLLLNRGLQSIFPLMSFWWLLMFLANLALPPSINFFGELLIISSLFSWS-NWTILLLGLGVLLTAVYSLYMFVMTQH 411 (452)
T ss_pred -CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -802999845587789999999999999873312053999999999999984-999999999999999999999999985
Q ss_pred CCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99877865---56733218999999999999999767658
Q gi|254780867|r 432 DQSTECVV---VVAKEMRLFIFGSILFVTGYFLIENILNS 468 (478)
Q Consensus 432 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (478)
||.++... +.+.++...+..........+++|+++..
T Consensus 412 G~~~~~~~~~~~~~~~e~~~~~~~~~p~~~l~~~p~~~~~ 451 (452)
T MTH00206 412 GPTSKHLKNLSPSTTREHLLLFLHLLPYILLILFPELILG 451 (452)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9993125148998377999999999999999984798609
No 53
>MTH00014 ND4 NADH dehydrogenase subunit 4; Validated
Probab=100.00 E-value=0 Score=541.11 Aligned_cols=412 Identities=19% Similarity=0.217 Sum_probs=356.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 99999713221003167641007999999999999999999999963210022420667999999999987314610221
Q gi|254780867|r 53 LFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFY 132 (478)
Q Consensus 53 l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~ 132 (478)
..+......+...++..+.+|.+|..+..+....+....++++.+.++++++ ++|+.+.++...++++++.++|++.+|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~vD~lS~~l~~Ls~~i~~l~~l~S~~~~~~~~~~-~~f~~l~l~l~~~m~~~f~s~nl~~fy 114 (451)
T MTH00014 36 LIFLYMPSASISMLTESLSSDMLSFPLIILTLWITALMILASFKIFQNNKAP-KTFMTNILILNLILILCFSASNLLMFY 114 (451)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998565432778758883467479999999999999999969998568637-899999999999999999982799999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 24577788777766532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 133 MSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 133 v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
++||.+++++|.+|..|++++++.+|+.||++++.+|+..++.|+..+|..+||+++......... +.........++
T Consensus 115 if~E~~lip~~~LI~~~g~~~~r~~A~~~~~iyt~~gsl~lL~~i~~ly~~~gs~~~~~~~~~~~~--~~~~~~~~~~~~ 192 (451)
T MTH00014 115 IFFEASLIPTLFLILGWGYQPERLQAGFYLMIYTVTASLPLLMSILLIFYTNNSLNMFMSNTYTPP--SIYSMNLWWLIT 192 (451)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC--CHHHHHHHHHHH
T ss_conf 999999999999999608979999999999999999999999999999986496999999986634--458999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 12344444321100012101221001233332100000232111112440001122210000012221022220000012
Q gi|254780867|r 213 LVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQ 292 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q 292 (478)
+.|+++|+|++|+|.|+||||+|||+++|++++++.+|+|+|+++|+.+...+....+...+..+|++|+++|++.|++|
T Consensus 193 ~~aF~vK~p~~P~H~WLP~Ah~eAP~~~S~lLagvllK~G~YgliR~~~~~~~~~~~~~~~l~~i~~~~~~~~~l~al~Q 272 (451)
T MTH00014 193 ILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMSINKSLSAPLSSISLVGAVITSLICIRQ 272 (451)
T ss_pred HHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999970687201013431075977999999999999999999999985313369999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
Q ss_conf 44544356421112442111111215-77888864300232010011000026787408764550210466523211478
Q gi|254780867|r 293 KDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTC 371 (478)
Q Consensus 293 ~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~ 371 (478)
+|+||++|||||+|+|+++.|++.++ .|..|+++|+++|++.|+++|.++|.+++|++ +||++++||+.|++|.++.
T Consensus 273 ~DlKrllAYSSIshmG~i~~gi~~~~~~g~~gal~~mi~Hgl~~s~LF~~~g~i~~~~~--tr~i~~~~Gl~~~~P~~~~ 350 (451)
T MTH00014 273 PDLKSLIAYSSVGHMGLMTAGAMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTH--TRSLFLTKGLLSLFPAMTM 350 (451)
T ss_pred HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHCCCHHHHHHHHH
T ss_conf 36683542117989999999999745899999999999999999999999999998757--7149985893400279999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHH
Q ss_conf 99998653036650000675999999999628499999999999999999999999996499877865---567332189
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLF 448 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~ 448 (478)
++.++.+++.|+||++||+||+.++.+.++.+ ++..+...+++++++.|++|.+...+.|++.+..+ +.+.++...
T Consensus 351 ~~~i~~la~~g~Pp~~gF~sE~~i~~~~~~~~-~~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~~~~~~~~~~~re~~~ 429 (451)
T MTH00014 351 WWFLLSAANMAAPPSINLLSEIMLLTSILSSS-TSTAILLALTSFLAAAYSLFLYTSTQHGSPPSFSNPLNLFTPRNHTL 429 (451)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHH
T ss_conf 99999999762653361999999999999986-99999999999999999999999987799801040089984579999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999976765899
Q gi|254780867|r 449 IFGSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
+.....-....+++|+...+|+
T Consensus 430 ~~~h~~pl~~l~~~p~~~~~w~ 451 (451)
T MTH00014 430 MTLHLVPLFILILKPDLITNWL 451 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999998199997149
No 54
>COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=0 Score=539.75 Aligned_cols=405 Identities=24% Similarity=0.396 Sum_probs=351.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 10031676410079999999999999999999999632100224206679999999999873146102212457778877
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
..+++..+..|+++..+.....+.+....+++..+.++ +++++.|+.++++..+|+.+.+.++|++++|++||++++++
T Consensus 64 ~~~~gi~~~~D~ls~~f~l~~~lv~~~~~iys~~~~~~-~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei~~isS 142 (504)
T COG0651 64 LAPFGIVLAADPLSAIFLLIIALVGLLASLYSIGYMRH-EKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSS 142 (504)
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 78710687420457999999999999999982898623-33003999999999999999999755999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|.||..++++++..++++||++++.+|+.+++.|+.++|..+||+|+.|+.....+..++.....+..++++|++.|+|+
T Consensus 143 ~~Li~~~~~~~~~~~a~~~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~~~~~~~~~~~~~L~ligf~~Kagl 222 (504)
T COG0651 143 YFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGL 222 (504)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999808765666457788778868999999999999997172029988755420346358999999999999996376
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC---CCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1100012101221001233332100000232111112440001122---2100000122210222200000124454435
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS---GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~---~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
||+|.|+||+|.+||+|+||++|++++|.|+|.+.|+.+...+... .+.+.+...|.+|+++|+++|+.|+|+||++
T Consensus 223 fPlh~WLP~A~~~ap~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlL 302 (504)
T COG0651 223 FPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLL 302 (504)
T ss_pred CCHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 51123310120679616999998999999999999999999264000357899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 6421112442111111215-778888643002320100110000267874087645502104665232114789999865
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLF 378 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~l 378 (478)
|||||+|+||+++|++.++ .++.++++|.++|++.|.++|+++|.+.+++| +||++|++|+.|+||+++.++.++.+
T Consensus 303 AYsti~q~G~illg~~ig~~~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~g--~~~i~~~gGl~~~~P~~~~~~~i~~l 380 (504)
T COG0651 303 AYSTVSQMGYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTG--TRDLEKLGGLAKRMPLTAVAFLIGAL 380 (504)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHCCCHHHHCHHHHHHHHHHHH
T ss_conf 9999988999999999668057999999999999999999997118999727--33197703747545399999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCHHHHH
Q ss_conf 3036650000675999999999-----628499999999999999999999999996499877865567---33218999
Q gi|254780867|r 379 SLAGIPPFAGFFGKYFLLISAV-----KREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA---KEMRLFIF 450 (478)
Q Consensus 379 sl~GlPp~~GF~sK~~i~~~~~-----~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~---~~~~~~~~ 450 (478)
+++|+||++||+|||+++++.. +...++++.+.++.+.....++.|.....+++++++..++.+ ..+.....
T Consensus 381 sl~GlPp~~GF~sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (504)
T COG0651 381 SLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIFMLLFFGQGAPIERDVPEVPLLMLAPMV 460 (504)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHH
T ss_conf 98079850538999999998762223699999999999999999999999999998603467410155421488888799
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999976765899
Q gi|254780867|r 451 GSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~ 470 (478)
.....++..++.|++..+..
T Consensus 461 ila~~~i~~g~~~~~~~~~~ 480 (504)
T COG0651 461 ILAILCLVLGLAPDPLLPKI 480 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999986179999988
No 55
>MTH00114 consensus
Probab=100.00 E-value=0 Score=528.55 Aligned_cols=384 Identities=18% Similarity=0.260 Sum_probs=324.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..+..++..++..+..++.+|++++++ ..||+.++.++..+|++++.|+|++++|++||.+++++|.
T Consensus 71 ~i~~sf~~D~lS~~f~~vv~~Is~~V~~yS~~YM~~d~~-~~rF~~~l~lF~~sMl~Lv~s~Nl~~lfigWEgvgl~Syl 149 (600)
T MTH00114 71 NINISFTFDTYSLMFIPIALFVTWSILEFSHWYMSTDPN-INKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFL 149 (600)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 806522068649999999999999999998997269998-2369999999999999999972499999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|++|+++.+|++||++++++||..++.|+..++...|++|++++....... + ......++.|...|+||+|
T Consensus 150 LI~~~~~~~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~gs~~~~~~~~~~~~~--~---~~~~l~lilaa~~KSAQfP 224 (600)
T MTH00114 150 LIGWWFARSDANTSALQAIIYNRIGDIGLILTMAWLAMNLSTWNLQEMFTQTNTT--P---LLPLLGLILAATGKSAQFG 224 (600)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH--H---HHHHHHHHHHHHHHHHCCC
T ss_conf 9999838888999999999999998999999999999983784399998737507--8---9999999999998750077
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.||||||| |||||||++|+. ++++|+|.++|+.+.... .+....++.++|.+|+++|+..|+.|+|+||++||||
T Consensus 225 fh~WLP~AMe-aPTPVSALlHsstmV~AGVylliR~~pl~~~-~~~~~~~il~lG~lT~l~a~~~Al~Q~DiKkilAyST 302 (600)
T MTH00114 225 LHPWLPAAME-GPTPVSALLHSSTMVVAGIFLLIRLHPILQT-NNTALTICLCLGATTTLFAALCALTQNDIKKIIAFST 302 (600)
T ss_pred CCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7141377736-8980899997305425016688764217413-7689999999999999999999985352778988735
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
++|+|||++++|.+.. ..+++|.++|++.|..+|+|+|.+.+..+ ++||+||+||+.|++|.+..++.++.+|++|+
T Consensus 303 ~SQLG~M~~~iGlg~~--~lA~fHl~~HA~FKalLFL~aG~iIh~~~-~~qDir~mGgl~~~mP~T~~~~~igslsL~G~ 379 (600)
T MTH00114 303 SSQLGLMMVTIGLNQP--QLAFLHMSTHAFFKAMLFLCSGSIIHNLN-NEQDIRKMGGLHKTLPITSSCLTIGSLALMGM 379 (600)
T ss_pred HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9887899999864649--99999999899999999996258986068-85249974898666589999999999998467
Q ss_pred CHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHHH
Q ss_conf 5000067599999999962849-9999999999999999999999996499877865567332-18999999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEM-RLFIFGSILFVTGY 459 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 459 (478)
||++||+||+.++|+...++.. +...+..+++.+|+.|..|.++..+.++|+.+.....+|. +....+...+..+.
T Consensus 380 PflsGFySKD~Ile~~~~s~~n~~~~~l~~~~~~lTa~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~pl~~L~~~s 457 (600)
T MTH00114 380 PFLSGFYSKDTIIETMNTSHLNAWALLLTLIATMLTAAYSLRIIFYTQTGHPRHKPTTLLNENNPTQINPITRLALGS 457 (600)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 411146438999999984752899999999999999999999999997289988988888889888999999999999
No 56
>MTH00004 ND5 NADH dehydrogenase subunit 5; Validated
Probab=100.00 E-value=0 Score=529.77 Aligned_cols=381 Identities=19% Similarity=0.248 Sum_probs=319.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..+...+..++..+..++.+|++++++ ..||+.++.++..+|++++.|+|++++|++||.+++++|.
T Consensus 75 ~i~~~f~~D~lS~~f~~vv~~Is~~I~~yS~~YM~~d~~-~~rF~~~l~lF~~sMl~lV~s~Nl~~lfigWEgvGl~Syl 153 (604)
T MTH00004 75 NIPISFKLDQYSLMFLPIALFVTWSILEFATWYMASDPH-ITKFFKYLLIFLIAMLILTTANNMFQLFIGWEGVGIMSFL 153 (604)
T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 606776328639999999999999999996897078999-1689999999999999999973099999999999999998
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|.+|+++.+|++|+++++|+||..++.|+.+++...||+|++++.... ..... ... .++.|...|+||+|
T Consensus 154 LI~~~~~r~~a~~aa~ka~i~nRiGD~~lll~i~~l~~~~gt~~~~~~~~~~---~~~~l--~~l-~lilaa~gKSAQfP 227 (604)
T MTH00004 154 LIGWWHGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSQT---QTPLL--PLL-GLILAATGKSAQFG 227 (604)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHCC---CHHHH--HHH-HHHHHHHHHCCCCC
T ss_conf 8845069768899999999998312699999999999994884399988364---05899--999-99999998404277
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.||||||| |||||||++|+. ++++|+|.++|+.+.+.. .+.....+.++|.+|+++|+..|+.|+|+||++||||
T Consensus 228 fh~WLP~AMe-aPTPVSALlHssTmV~AGVylliR~~~l~~~-~~~~~~~~l~~G~lT~l~aa~~Al~Q~DiKkiiAyST 305 (604)
T MTH00004 228 LHPWLPAAME-GPTPVSALLHSSTMVVAGIFLLIRTHPILQN-NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFST 305 (604)
T ss_pred CCCCCHHHHC-CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 7201467755-8993676624430124679999999999865-7999999999999999999999972231878999889
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
++|+|||+.++|.+.. ..+++|.++|++.|..+|+|+|.+.+.. +++||++|+||+.|++|.++.++.++.+|++|+
T Consensus 306 ~SQLG~M~~~iglg~~--~lA~fHl~~HA~FKAlLFL~aGsiIH~~-~~~qDir~mGgl~~~mP~t~~~~~igslsL~G~ 382 (604)
T MTH00004 306 SSQLGLMMVTIGLNQP--QLAFLHISTHAFFKAMLFLCSGSIIHNL-NNEQDIRKMGGLQKTLPITTSCLTIGNLALMGT 382 (604)
T ss_pred HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9899999999974639--9999999988999999998105999705-786209986798620389999999999985267
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHHHH
Q ss_conf 5000067599999999962849999-999999999999999999999649987786556733-2189999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE-MRLFIFGSILFVT 457 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 457 (478)
||++||+||+.|+|....++....+ .+..+++.+|+.|..|+++..++++|+.......+| .+....+...+..
T Consensus 383 PflsGFySKD~IlE~~~~s~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~Pl~~La~ 458 (604)
T MTH00004 383 PFLAGFYSKDLIIETLNTSYLNAWALLLTLLATSFTATYSLRMTLLVQTGFPRTPPLTPINENNPTITNPITRLAL 458 (604)
T ss_pred CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 7432241169999999857508999999999999999999999999980899888878878896899999999999
No 57
>PRK06591 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=535.10 Aligned_cols=412 Identities=20% Similarity=0.332 Sum_probs=329.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHH
Q ss_conf 86299999999999999999998640230158999999999999999999971322---------100316764100799
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYE---------GIGLGGAYISDRFSY 77 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~---------~~~~~~~~~~D~~s~ 77 (478)
+.|....+|.++|.++++......+..+.++...... ....+............. ..+++..+..|.++.
T Consensus 3 ~~~hlpil~IliPl~~all~~l~~r~~~~~~~i~~~~-~~~~~~~~i~~~~~~~~~~~~~~~g~w~~~~GI~~~~d~l~~ 81 (433)
T PRK06591 3 LADHFPIIQILFPLFGALLSIISFRFIEFARIITRIC-ILSSLLVSIYGYSIIQNTELSYTMGGWTSKIGIEYRLNSLNQ 81 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCHHH
T ss_conf 1654899999999999999999864168999999999-999999999999995688449986055787773888760338
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999963------2100224206679999999999873146102212457778877776653200
Q gi|254780867|r 78 FIKAILLMSSIIIFIKMFSCIY------VKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRK 151 (478)
Q Consensus 78 ~~~~l~~~~~l~~~~~~~~~~~------~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~ 151 (478)
.+...+.........++..+.+ .+++++++||.++++...|+++++.|+|++++|++||++++++|.||+++++
T Consensus 82 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~fy~~~l~~~~g~~g~~~s~Dlf~lfVf~Ei~~i~sy~Li~~~~~ 161 (433)
T PRK06591 82 AIIVYLNLVLLFFLVFCHKITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNN 161 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999988746665302566537499999999999999999937999999999999999999980998
Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 01344555554014620467998898853001000001222211101343100001222211234444432110001210
Q gi|254780867|r 152 SVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPD 231 (478)
Q Consensus 152 ~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~ 231 (478)
+++.||++||++++.+|+.++++|+.++|..+||+|++|+.....+..++.....+..++++|+++|+|+||+|.|+||
T Consensus 162 -~~~~~aa~kY~i~~~~gs~~~L~gi~~ly~~tGtl~~~~i~~~~~~~~~~~~~~~~~~l~~ig~~~K~a~fPlH~WLPd 240 (433)
T PRK06591 162 -PKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMR 240 (433)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf -8999999999999999999999999999999768569999998763667528999999999999999726436160366
Q ss_pred HHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC---CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 122100123333210000023211111244000112---22100000122210222200000124454435642111244
Q gi|254780867|r 232 VYEGSPMFMTAFLATIPKFATTMALCRITSVFWPML---SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308 (478)
Q Consensus 232 a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~---~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G 308 (478)
||+++|+++++++|++++|+|+|.+.|+.....+.. +.+..++.++|++|+++|++.|++|+|+||++|||||+|+|
T Consensus 241 ay~~ap~~~s~lls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~~i~~l~~~t~i~g~~~Al~Q~diKrllAYSsIsq~G 320 (433)
T PRK06591 241 AYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIG 320 (433)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34789789999999999999999999999997462246899999999999999999999999872199999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 21111112157788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 309 YALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 309 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
||+++.+. ..+..++..|+.+|++.|.++|...+. +|..|++| .+..+.++.+|++|+||++|
T Consensus 321 yi~l~~~~-~~~~~~~~~~l~~~~~~k~~lfl~~~~---------------~~~~~~~~-~~~~f~i~~lsl~GiPp~~G 383 (433)
T PRK06591 321 YVFLLYVT-ENGIIILPSLLLADSINKIALFLIDAY---------------NESYKRSP-NKVLFIIAIICSCGLPISPL 383 (433)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHCCCCH-HHHHHHHHHHHHHCCHHHHH
T ss_conf 99999998-999999999999999999999999987---------------77604898-99999999999974014424
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 6759999999996284999999999999999999999999964998778
Q gi|254780867|r 389 FFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC 437 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~ 437 (478)
|+|||++++++++++.++..++.+++|+++++||+|+++.+|++|+++.
T Consensus 384 F~sK~~il~a~~~~~~~~~~~~~li~s~lt~~Y~~rii~~~f~~~~~~h 432 (433)
T PRK06591 384 FFIKVNILELLLQQNLLLDFIIILLSSVGSLFYHYKMVLLLFSTKQESH 432 (433)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999998381999999999999999999999999985998667
No 58
>MTH00150 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=533.24 Aligned_cols=429 Identities=20% Similarity=0.254 Sum_probs=360.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 02301589999999999999999999713221003167641007999999999999999999999963210022420667
Q gi|254780867|r 32 FSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVI 111 (478)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l 111 (478)
..++++.+..........................++..+..|.+|..+..+....+....+++.++.+++++. ++|+.+
T Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~D~lS~~~i~L~~~i~~l~~l~S~~~~~~~~~~-~~f~~l 91 (447)
T MTH00150 13 LLNKKMSWEVRVWSLMLLSFLSLKFLNQSFWGESLNGLFSVDSMSGLLIFLSLWISGLMLLASQYSVKLENKS-SSFSLC 91 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHH
T ss_conf 8730418999999999999999999872100324244220125069999999999999999988998605311-699999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 99999999998731461022124577788777766532000134455555401462046799889885300100000122
Q gi|254780867|r 112 MLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQ 191 (478)
Q Consensus 112 ~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~ 191 (478)
.++...++.+++.|+|++.+|++||++++++|.+|+.|++|+++.+|+.|+++++..|+..++.++..+|..+||+|+.+
T Consensus 92 ~lll~~~m~~~f~s~dl~~fyif~E~~lip~~~LI~~~g~~~~~~~A~~~~~~~t~~gsl~lL~~i~~ly~~~gs~~~~~ 171 (447)
T MTH00150 92 VLLLCLILVLAFSSSNFFMFYIFFEASLIPTLLLIIGWGYQPERLQAGMYMMLYTVGASLPLLLVLLWLSVSYGSSFMLL 171 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999999799999999999999999999983898799999999999999999999999999999808748999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22111013431000012222112344444321100012101221001233332100000232111112440001122210
Q gi|254780867|r 192 IATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLL 271 (478)
Q Consensus 192 l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~ 271 (478)
+.....+.. ......+++.|+++|+|++|+|.|+||||++||+|+|++++++.+|+|.|+++|+.....+....+.
T Consensus 172 ~~~~~~~~~----~~~~~~~~~l~f~vK~p~fPfH~WLPdAh~eAP~~~S~lLagvl~K~G~ygliR~~~~~~~~~~~~~ 247 (447)
T MTH00150 172 ISYLLSYSV----MWLWGLGVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGIMRMMSVFNLSSSSFS 247 (447)
T ss_pred HHHHHCHHH----HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 998722107----9999999999999983898211107632364876999999999999999999999985100189999
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCC
Q ss_conf 00001222102222000001244544356421112442111111215-77888864300232010011000026787408
Q gi|254780867|r 272 PIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDG 350 (478)
Q Consensus 272 ~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~ 350 (478)
..+..+|++|+++|++.|++|+|+||++|||||+|+||++.|++.++ .|..|+++|+++|++.|.++|.++|.+++|++
T Consensus 248 ~~l~~l~~~~~v~g~l~al~Q~DlKrllAYSSIshmG~il~gi~~~~~~g~~gal~~mi~Hgl~~~~LF~~~g~i~~~~~ 327 (447)
T MTH00150 248 VLLISLSLWGGVLTSIICLRQSDLKSLIAYSSVGHMSLVLAGVLSNTSWGWEGALIMMVSHGFCSSGLFCLANLTYEKVH 327 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999869998970987899999998237899999999999999999999999748873258
Q ss_pred CCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76455021046652321147899998653036650000675999999999628499999999999999999999999996
Q gi|254780867|r 351 NNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMW 430 (478)
Q Consensus 351 ~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f 430 (478)
+||++++||+.|++|.++..+.++.++++|+||++||+||+.++.+.++.+ ++..++..+++.+++.|++|.+...+
T Consensus 328 --tr~i~~~~Gl~~~~P~~~~~~~i~~la~~GiPp~~gF~se~~i~~~~~~~~-~~~~~~~~l~~~lsa~Ysl~l~~~~~ 404 (447)
T MTH00150 328 --SRSLFLMKGMLNVYPMLSLWWFLFCIANMGAPPFLNLLGEIMLFPSLYFYS-PWFLVILGLMVFLSGLYNLYLYTSIQ 404 (447)
T ss_pred --CEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --765573399844208999999999999751431050999999999999997-99999999999999999999999975
Q ss_pred CCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4998778655---6733218999999999999999767658
Q gi|254780867|r 431 FDQSTECVVV---VAKEMRLFIFGSILFVTGYFLIENILNS 468 (478)
Q Consensus 431 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (478)
.|+..+..+. .+.++...+.....-...+++.|+...+
T Consensus 405 ~G~~~~~~~~~~~~~~~e~~~~~~h~~p~~~~~~~~~~~~~ 445 (447)
T MTH00150 405 HGSVSSFLKPSFVNKSSEYLLLFLHFYPLLLLFLNPGFLSK 445 (447)
T ss_pred CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79884236118998369999999999999999984999836
No 59
>MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=525.73 Aligned_cols=382 Identities=19% Similarity=0.250 Sum_probs=321.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
.+.+..+..|.+|..+..++...+..+..++..|++++++ ..||+.++.++..+|++++.|+|++++|++||.+++++|
T Consensus 72 ~~~~~~f~~D~~S~~f~~vv~~Is~~V~~yS~~YM~~d~~-~~rF~~~l~lF~~sMl~lv~s~Nl~~lfigWEgvgl~Sy 150 (598)
T MTH00066 72 FNINSSFKFDQYSILFLPIALFVTWSILEFAIWYMHSDPK-INRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSF 150 (598)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3617775328628999999999999999997897078998-148999999999999999998059999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||++|.+|+++.+|++|+++++++||..+++++..++...||+|++++..... .... ....++.|...|+||+
T Consensus 151 lLI~~~~~~~~a~~aa~~a~l~nriGd~~lll~i~~l~~~~gs~~~~~~~~~~~---~~~~---~~l~lilaa~~KSAQf 224 (598)
T MTH00066 151 LLIGWWHARSDANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLYD---NSTL---PLLGLILAATGKSAQF 224 (598)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC---HHHH---HHHHHHHHHHHHHCCC
T ss_conf 999887497678999999999997759999999999999839810999987464---0699---9999999998743318
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001210122100123333210-00002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.||||||| |||||||++|+ .++++|+|.++|+.+.+.. .+....++.++|.+|+++|+..|+.|+|+||++|||
T Consensus 225 P~h~WLP~AMe-aPTPVSALlHSsTmV~AGVylLiR~~~~~~~-~~~~~~~~l~lG~lT~l~a~~~Al~Q~DiKkilAyS 302 (598)
T MTH00066 225 GLHPWLPAAME-GPTPVSALLHSSTMVVAGIFLLIRFHPLLEN-NQTALTICLCLGALTTLFTAACALTQNDIKKIVAFS 302 (598)
T ss_pred CCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 67042266614-8996023331258988508898998878741-699999999999999999999998632188999989
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|++|+|||++++|.+.. ..+++|..+|++.|..+|+|+|.+.+..+ ++||++|+||+.|++|.++.++.++.+|++|
T Consensus 303 T~SQLG~M~~~iglg~~--~lA~fHl~~HA~FKAlLFL~aG~iIh~~~-~~qDir~mGgl~~~mP~T~~~~~ig~laL~G 379 (598)
T MTH00066 303 TSSQLGLMMVTIGLNQP--QLAFFHICTHAFFKAMLFLCSGSIIHSLN-DEQDIRKMGGLQNMLPMTTSCLTIGSLALTG 379 (598)
T ss_pred HHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99899999999872519--89999999999999999983048986357-7135988089887766999999999999964
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHHHH
Q ss_conf 65000067599999999962849-999999999999999999999999649987786556733-2189999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE-MRLFIFGSILFVT 457 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 457 (478)
+||++||+||+.|+|+...++.. +...+..+++.+|+.|..|.++..+.++|+.......+| .+....+...+..
T Consensus 380 ~PflsGF~SKD~Ile~~~~~~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~pl~~La~ 456 (598)
T MTH00066 380 TPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNKLIINPIKRLAW 456 (598)
T ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 40432887589999998857458999999999999999999999999964899888777878896789999999999
No 60
>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=526.71 Aligned_cols=381 Identities=20% Similarity=0.250 Sum_probs=325.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..+..++...+..+..++.+|+.++++. .||+.++.++..+|++++.|+|+++++++||.+++++|.
T Consensus 67 ~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~-~rF~~~l~lF~~sMl~Lv~s~Nl~~l~igWEgvgl~Syl 145 (595)
T MTH00211 67 SLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNV-NRFFKYLLLFLISMLILVSANNLFQLLIGWEGVGIMSFL 145 (595)
T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7276511583089999999999999999968873789995-789999999999999999983699999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|++|+++.+|++|+++++|+||..++.|+.+++...||+|++++.... +........+++.|...|+||||
T Consensus 146 LI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~~~~~i~~~~-----~~~~~~~~~~l~laa~~KSAQfP 220 (595)
T MTH00211 146 LISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSWTMQQLFILS-----DMVNTLPLLGFLLAAMGKSAQFG 220 (595)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8923189589999999999999389999999999999992772499998636-----43889999999999998743165
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
+|.||||||| |||||||++|+. ++++|+|.++|+.+.... .+.....+.++|.+|+++|++.|+.|+|+||++||||
T Consensus 221 lh~WLP~AM~-aPTPVSALlHsstmV~AGvylliR~~~~~~~-~~~~~~~~l~lG~lT~l~a~~~Al~q~DiKkilAyST 298 (595)
T MTH00211 221 LHPWLPAAME-GPTPVSALLHSSTMVVAGVFLLIRLSPLILN-NFLVLGAVLCLGALTTLFAALCALTQNDMKKIVAFST 298 (595)
T ss_pred CCHHHHHHHC-CCCCHHHHHHHHHHHHCCHHHEECCCHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7254587606-9992899998758998063100110527441-7899999999999999999999987777878887426
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
++|+|+|++++|.+.. ..+++|.++|++.|..+|+|+|.+.+..+ ++||+||+||+.|++|.++.++.++.+|++|+
T Consensus 299 ~SQlG~M~~aiglg~~--~~a~fHl~~HA~fKalLFL~aG~iIh~~~-~~qDir~mGgl~~~mP~t~~~~~ig~lsL~G~ 375 (595)
T MTH00211 299 TSQLGLMVVALGLGQP--QLAFLHICTHAFFKAMLFLCSGSIIHSLN-NEQDIRKMGGLSKALPFTSSCLIIGSLALMGF 375 (595)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9888899999876589--99999999789999999983128877447-71379870798876389999999999998467
Q ss_pred CHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf 5000067599999999962849-9999999999999999999999996499877865567332-18999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEM-RLFIFGSILFV 456 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~ 456 (478)
||++||+||+.|+|+...++.. +...+.++++.+|+.|..|++...+.++|+.......+|. +....+...+.
T Consensus 376 P~lsGF~SKD~IlE~~~~s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~~~~~~e~~~~~~~Pl~~La 450 (595)
T MTH00211 376 PFLAGFFSKDSILENMNMSNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLPLSPINEENNSLKNPLKRLA 450 (595)
T ss_pred CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 600225116899999986624699999999999999999999999999489889988888899889999999999
No 61
>MTH00044 ND4 NADH dehydrogenase subunit 4; Validated
Probab=100.00 E-value=0 Score=527.86 Aligned_cols=401 Identities=19% Similarity=0.268 Sum_probs=346.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 10031676410079999999999999999999999632100-22420667999999999987314610221245777887
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFA 141 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~ 141 (478)
..+.+..+.+|++|..+..+..........++.++.+++++ ++++|+.+.++...++++++.|+|++.+|++||.+.++
T Consensus 50 ~~~~~~~~~~D~lS~~lilLt~~l~~l~~laS~~~l~~~~~~~~~~f~~lll~l~~~l~~~F~s~dl~~fyiffE~~lIp 129 (460)
T MTH00044 50 WHNLSLSLATDSISTPLIILSCWLIPISLLASINHLSNYSLLNQRTFISLIIIILTALIITFSSLELSLFYIAFETTLIP 129 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 54565999576768999999999999999997999862864218899999999999999999983899999999999999
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77766532000134455555401462046799889885300100000122221110-13431000012222112344444
Q gi|254780867|r 142 LYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLF-IGHRSFVLIVGVVLILVGLFFKM 220 (478)
Q Consensus 142 ~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~-~~~~~~~~~~~~~ll~~g~~~K~ 220 (478)
+|.+|+.|++++++.||+.||++++.+||..+++|+..+|..+||.++........ +............+++.|+++|+
T Consensus 130 ~~~LI~~wG~~~~r~~A~~~~~~yt~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~l~~~laF~vK~ 209 (460)
T MTH00044 130 TLILISRWGAQKERYQASLYFLFYTLFGSLPLLISLIAIYVSSSSLSIPSVNLNWNFTSSPTSLTSIWWLFCFLAFLVKM 209 (460)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999883998799999999999999989999999999999848751999999988753416699999999999999973
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321100012101221001233332100000232111112440001-1222100000122210222200000124454435
Q gi|254780867|r 221 ALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP-MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 221 ~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~-~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
|++|+|.|+||||+|||+++|++++++.+|.|+|+++|+.....+ ....+...+..+|+.++++|++.|++|+|+||++
T Consensus 210 pl~P~H~WLP~Ah~eAP~~~SmlLAgvllKlG~YgliR~~~~~~~~~~~~~~~~l~~l~~~g~~~~s~~al~Q~DlKrli 289 (460)
T MTH00044 210 PIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLISLFSTPSLNNLSFPLITFCIWGALITSIICLRQTDLKALI 289 (460)
T ss_pred HHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 68760123726435398069999999999999999999999863056899999999999999999999999864752999
Q ss_pred CCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 6421112442111111215-778888643002320100110000267874087645502104665232114789999865
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLF 378 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~l 378 (478)
|||||+|+|+++.|+..++ .|..|+++|+++|++.|+++|..+|.+++|++ +||++++||+.|++|.++..+.++.+
T Consensus 290 AYSSVsHmG~v~~gi~~~~~~g~~Gal~~miaHgl~ss~LF~lag~~y~rt~--tr~i~~~~Gl~~~~P~~~~~~~i~~l 367 (460)
T MTH00044 290 AYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANTLYERSG--TRTLAITRGLKLITPLLTLWWLITCA 367 (460)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9933998999999999705889999999999999999999999889997038--67378738816563799999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCCCCHHHHHHHHHH
Q ss_conf 303665000067599999999962849999999999999999999999999649987786---55673321899999999
Q gi|254780867|r 379 SLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECV---VVVAKEMRLFIFGSILF 455 (478)
Q Consensus 379 sl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~ 455 (478)
+..|+||++||+||+.++.+.++.+ ++..++..+++++++.|++|.++..+.|+.++.. ++.+.++...+....+.
T Consensus 368 a~~glPp~~gF~gE~~i~~s~~~~~-~~~~~~~~~~~~lta~Y~L~~~~~~~~G~~~~~~~~~~~~~~rE~~~l~~h~~p 446 (460)
T MTH00044 368 ANLGLPPLPNLIGELLIISSIIDWN-ILSFPIIGLATVFGAIYSLLIYQLTNSGTFPSFISNISPITSREHLLIFLHLLP 446 (460)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9751643460999999999999998-999999999999999999999999867998101433899857899999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999997676
Q gi|254780867|r 456 VTGYFLIENIL 466 (478)
Q Consensus 456 ~~~~~~~~~~~ 466 (478)
....+++|++.
T Consensus 447 ~~~l~~~P~~i 457 (460)
T MTH00044 447 LILIIINPSLI 457 (460)
T ss_pred HHHHHHCHHHH
T ss_conf 99999786888
No 62
>COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]
Probab=100.00 E-value=0 Score=519.32 Aligned_cols=402 Identities=23% Similarity=0.359 Sum_probs=353.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+-+..+|+.|..+ +...+.++.+.....+++.+++.++|+.+++....++++++.|.|++.+|+|||.+.+|.|++
T Consensus 73 l~y~vgvDGiS~~l---vlLt~~l~~lail~sw~~i~~r~~~f~~~~L~le~~~iGvF~a~DllLFyvFwE~~LIPmy~i 149 (497)
T COG1008 73 LSYHLGVDGISLLL---VLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGVFAALDLLLFYVFWELMLIPMYFL 149 (497)
T ss_pred CEEEEECCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 26999650787999---999999999999996266666088999999999999999999988999999999999999997
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6532000134455555401462046799889885300100--00012222111013431000012222112344444321
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG--CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g--s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
|+.|+++ ++..|+.|.++++..||.+++++....|..+| |+|+.++.+.... ...+......+++||.+|++++
T Consensus 150 IgiwGg~-~R~yAa~KFflYT~~gsl~mLla~~~~~~~~g~~TFd~~~l~~~~~~---~~~q~~L~~~f~iaFaVK~P~~ 225 (497)
T COG1008 150 IGIWGGK-RRIYAATKFFLYTLLGSLFMLLAFLYLYFLTGSPTFDILELLALNLP---LGVQTLLFLGFLIAFAVKMPLF 225 (497)
T ss_pred HHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCC---HHHHHHHHHHHHHHHHHCCCCC
T ss_conf 5420687-51488999999999989999999999998569972107999844677---5799999999999998406876
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1000121012210012333321000002321111124400011-222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM-LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~-~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|+|+||||||.+||+|+|..++++..|.|.|+++|+..+..|. ..+..+++..+|+++++||++.|+.|+|+||++|||
T Consensus 226 P~HTWLPDAh~eApt~gSViLaGiLlKmG~YGllRf~L~lfP~as~~fap~l~~L~visIiY~al~A~~Q~diKrliAYS 305 (497)
T COG1008 226 PLHTWLPDAHVEAPTAGSVILAGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYS 305 (497)
T ss_pred CCCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 53056872420389707899999999722267266230038763789999999999999999999999998689999998
Q ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 1112442111111-215778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 303 SIGHAGYALIGFS-TGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 303 si~q~G~i~~~l~-~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
|||||||+++|+. .+..|..|+++++++|++...++|+++|.+++|. ++||++++||+.|+||..+..++++.++..
T Consensus 306 SiSHMGfV~lgifs~~~~g~~GAv~QM~sHGlisa~LFl~vG~iy~r~--hTr~i~~~GGl~~~mP~~aa~~~~~~mAs~ 383 (497)
T COG1008 306 SISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERT--HTRDIADLGGLANKMPKLAALFMLFAMASL 383 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHCCHHHHCHHHHHHHHHHHHHHC
T ss_conf 266878999999981588887999999981389999999999999862--424688747787647599999999999966
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCHHHHHHHHHHHH
Q ss_conf 66500006759999999996284999999999999999999999999964998778----65567332189999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC----VVVVAKEMRLFIFGSILFVT 457 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 457 (478)
|+|.++||++|+.++.+.++.+ ++.+.++.++.++++.|.+..+++.++|+.+++ .++.+..+........+.++
T Consensus 384 glPG~sgFvgEFlil~G~f~~~-~~~~~la~~g~iltA~Y~L~~~~rv~fG~~~~~~~~~~~dl~~rE~~~~~~L~~~ii 462 (497)
T COG1008 384 GLPGTSGFVGEFLILLGSFQVF-PWVAFLAAFGLILTAVYMLWMYQRVFFGPLKEGSLAELPDLNGREVFILAPLVVLIL 462 (497)
T ss_pred CCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 8986301999899995231562-999999999999999999999999974877743134245743869999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999767658999998751
Q gi|254780867|r 458 GYFLIENILNSSIMKIVMSL 477 (478)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~l 477 (478)
.++++|+++.++..+.++++
T Consensus 463 ~lGvyP~~~~~~~~~~~~~l 482 (497)
T COG1008 463 FLGVYPNPILDIIQPAVVNL 482 (497)
T ss_pred HHHCCCHHHHHHHHHHHHHH
T ss_conf 98178689998879999999
No 63
>MTH00068 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=517.34 Aligned_cols=403 Identities=15% Similarity=0.205 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 0031676410079999999999999999999999632100-224206679999999999873146102212457778877
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
...+..+.+|..|..+..+.........+++.++.++++. +++.|+.++++...++++++.|+|++.+|++||.+.+|+
T Consensus 50 ~~~~~~~gvD~lS~~li~Lt~~l~~l~ilaS~~~~~~~~~~r~~~f~~l~l~l~~~l~~~F~s~dl~lFyiffE~~LIp~ 129 (458)
T MTH00068 50 MFTNKYLGIDQISSPLLILTCWLLPLMILASQNHLKNNPLNRQRMYISMLIILQLTLILAFSATELILFYIAFEATLIPT 129 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67728880178689999999999999999957998418520388999999999999999999968999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|.+|+.|++|+|+.+|+.|+++++.+||..++.|+..+|..+||+++.++...................++.||++|+|+
T Consensus 130 ~~LI~~wG~~~~r~~A~~~~~~yT~~gSl~lL~~i~~ly~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~llaF~vK~p~ 209 (458)
T MTH00068 130 LIIITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLTLLELMPPMQLMTYTNKIWWLACLLAFMVKMPL 209 (458)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999869976899999999999999999999999999997599739999998877543679999999999999997678
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11000121012210012333321000002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
+|+|.|+||||+|||+++|++++++..|.|+|+++|+.....+........+..+|++++++|++.|++|+|+||++|||
T Consensus 210 ~p~H~WLP~Ah~eAP~~~S~ilagvllK~G~YgliR~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~Q~DlKrliAYS 289 (458)
T MTH00068 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISIMLTPLSKELSYPFIILALWGVLMTSLICMRQTDLKSLIAYS 289 (458)
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88886661654459807899999999999899999997514425899999999999999999999999823666999998
Q ss_pred CCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 111244211111121-5778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 303 SIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 303 si~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||+|+|+++.|+..+ +.|..|+++|+++|++.|+++|..+|.+++|++ +||++++||+.+++|.++..+.++.++..
T Consensus 290 SvshmG~i~~gi~~~~~~g~~Gal~~mi~Hgl~ss~LF~l~g~~y~r~~--tr~i~~~~Gl~~~~P~~~~~~~i~~la~~ 367 (458)
T MTH00068 290 SVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTH--SRTLLLLRGAQTILPLMATWWLLINLSNM 367 (458)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 7999999999999737688999999999999999999999999997048--62488848955554899999999999971
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHH
Q ss_conf 6650000675999999999628499999999999999999999999996499877865---5673321899999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 458 (478)
|+||++||+||+.++.+.++.+ ++...+..+++++++.|.+|.++..+.|+.++..+ +.+.++...+....+....
T Consensus 368 g~Pp~~gF~gE~~il~~~~~~~-~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~~~~~~~~~~~rE~~ll~lh~~pl~~ 446 (458)
T MTH00068 368 ALPPSPNLWGELTIMVSLFNWS-NWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLL 446 (458)
T ss_pred CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7887564899999999999984-999999999999999999999999976998152015899718999999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99997676589
Q gi|254780867|r 459 YFLIENILNSS 469 (478)
Q Consensus 459 ~~~~~~~~~~~ 469 (478)
.++.|+...++
T Consensus 447 l~~~p~li~~~ 457 (458)
T MTH00068 447 LILKPELISGM 457 (458)
T ss_pred HHHHHHHHHCC
T ss_conf 99839998334
No 64
>MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=514.20 Aligned_cols=385 Identities=18% Similarity=0.230 Sum_probs=323.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
.+.+..+..|.+|..+..++..++..+..++..|++++++. .||+.+++++..+|++++.|+|++++|++||.+++++|
T Consensus 78 ~~i~~~f~~D~~S~~f~~vv~~Is~~I~~yS~~YM~~d~~~-~RF~~~l~lF~~sMl~LV~s~Nl~~lfiGWEgvGl~Sy 156 (611)
T MTH00137 78 FDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNM-NRFFKYLLLFLIAMIILVTANNMFQLFIGWEGVGIMSF 156 (611)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 15176632185389999999999999999978970799982-27999999999999999997439999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||++|.+|+++.+||+|+++++|+||..+++++..++...||+|++++.....+.. .......++.|...|+||+
T Consensus 157 lLI~~w~~r~~a~~aa~~a~l~nRiGDiglll~i~~l~~~~gs~~~~~i~~~~~~~~----~~~~~~~l~laa~~KSAQf 232 (611)
T MTH00137 157 LLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWFAMNLNSWEIQQIFALSKDFD----LTLPLLGLILAATGKSAQF 232 (611)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC----HHHHHHHHHHHHHHHHCCC
T ss_conf 999995398678999999999993438999999999999977744999998612103----5999999999997542317
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100-0002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.||||||| +||||||++|+. ++++|+|.++|+.+.+.. .+.....+.++|.+|+++|+..|+.|+|+||++|||
T Consensus 233 Pfh~WLP~AMe-gPTPVSALlHSsTmV~AGVyLliR~~pl~~~-~~~~l~~~l~lG~lT~l~aa~~Al~Q~DiKkiiAyS 310 (611)
T MTH00137 233 GLHPWLPSAME-GPTPVSALLHSSTMVVAGIFLLIRLSPLMEN-NQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFS 310 (611)
T ss_pred CCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 56052388865-8981679998889999618999998578762-699999999999999999999997312187899987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|++|+|+|+.++|.+.. ..+++|..+|++.|+.+|+|+|.+.+..+ ++||+|++||+.+++|.+..++.++.+|++|
T Consensus 311 T~SQLGlM~~~iGlg~~--~lA~fHL~tHA~FKAlLFL~aG~iIH~~~-~~QDir~mGgl~~~mP~t~~~~~igsLaL~G 387 (611)
T MTH00137 311 TSSQLGLMMVTIGLNQP--QLAFLHICTHAFFKAMLFLCSGSIIHSLN-DEQDIRKMGGLHNLTPFTSSCLTIGSLALTG 387 (611)
T ss_pred HHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 88899999999874628--89999999999999999983069999637-8531998679741028999999999999853
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf 65000067599999999962849-9999999999999999999999996499877865567-3321899999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA-KEMRLFIFGSILFVTG 458 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 458 (478)
+||++||+||+.|+|+...++.. +...+..+++.+++.|..|+++..+.++|+....... |+.+....+...+..+
T Consensus 388 ~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~at~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~pl~~La~g 465 (611)
T MTH00137 388 TPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFLPLSPINENNPAVINPIKRLAWG 465 (611)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 423137875899999998667089999999999999999999999999558998878788888977899999999999
No 65
>MTH00124 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=515.40 Aligned_cols=405 Identities=17% Similarity=0.195 Sum_probs=346.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 3221003167641007999999999999999999999963210-022420667999999999987314610221245777
Q gi|254780867|r 60 PYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKP-FSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQ 138 (478)
Q Consensus 60 ~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~ 138 (478)
.......+..+..|..|..+..+..........++.++.++++ .++++|+.+.++...++++++.|+|++.+|++||..
T Consensus 46 ~~~~~~~~~~~g~D~lS~~li~Lt~~i~~l~il~S~~~~~~~~~~~~~~F~~~~l~l~~~l~~~F~s~dl~~FyiffE~~ 125 (457)
T MTH00124 46 YYPTKNSNQWLGIDQISAPLLVLSCWLLPLMIMASQNHLQHEPTQRKRTFITTLILLQPFLILAFSATELMLFYIMFEAT 125 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30277887999258878999999999999999998799852740028899999999999999999995899999999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88777766532000134455555401462046799889885300100000122221110134310000122221123444
Q gi|254780867|r 139 SFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFF 218 (478)
Q Consensus 139 ~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~ 218 (478)
.+|+|.+|+.|++|+|+.+|+.|+++++.+||..++.|+..+|..+||.|+..+.........+.........++.|+++
T Consensus 126 lIp~~lLI~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gt~~~~~~~~~~~~~~~~~~~~~~~l~~~laF~v 205 (457)
T MTH00124 126 LIPTLILITRWGNQPERLNAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLALLTAFMV 205 (457)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999886895899999999999999989999999999999769862999997624212417999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44321100012101221001233332100000232111112440001122210000012221022220000012445443
Q gi|254780867|r 219 KMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRL 298 (478)
Q Consensus 219 K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krl 298 (478)
|++++|+|.||||||.|||+++|++++++..|.|+|+++|+...+.+........+..+|++++++|++.|++|+|+||+
T Consensus 206 K~p~fp~H~WLP~Ah~eAP~~gSmiLAgvllKlG~YgliR~~~~~~~~~~~~~~~~i~l~l~g~i~~sl~al~Q~DlKrl 285 (457)
T MTH00124 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSSICLRQTDLKSL 285 (457)
T ss_pred HCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66899888762056433870799999999999999999999998515689999999999999999999999761019999
Q ss_pred CCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 5642111244211111121-577888864300232010011000026787408764550210466523211478999986
Q gi|254780867|r 299 MAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFL 377 (478)
Q Consensus 299 lAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~ 377 (478)
+|||||+|||+++.|+..+ +.|..|+++|+++|++.|+++|..+|.+++|++ +||++++||+.+++|.++..+.++.
T Consensus 286 iAYSSVsHMG~v~~gi~~~~~~g~~Ga~~~miaHgl~ss~LF~lag~iy~r~~--tr~i~~~~Gl~~~~P~~~~~~~i~~ 363 (457)
T MTH00124 286 IAYSSVSHMGLVIAAILIQTQWSLSGAMILMIAHGLTSSMLFCLANTNYERTH--SRTLLLTRGLQLLLPLMTTWWLLAN 363 (457)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99989999999999999679500689999999899999999999999999618--7159984990555788999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHH
Q ss_conf 53036650000675999999999628499999999999999999999999996499877865---567332189999999
Q gi|254780867|r 378 FSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSIL 454 (478)
Q Consensus 378 lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~ 454 (478)
++..|+||++||+||+.++.+.++.+ ++......+++++++.|.+|.++..+.|+..+..+ +.+.++...+....+
T Consensus 364 la~~g~Pp~~gF~gE~lil~~~~~~~-~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~~~~~~~~~~~re~~~l~~h~~ 442 (457)
T MTH00124 364 LTNMALPPTINLMGELTIISSLFNWS-PTTIILTGLGTLLTASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIL 442 (457)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99750644261999999999999997-99999999999999999999999987599804124789983899999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999976765
Q gi|254780867|r 455 FVTGYFLIENILN 467 (478)
Q Consensus 455 ~~~~~~~~~~~~~ 467 (478)
.....++.|....
T Consensus 443 pl~~l~~~p~l~~ 455 (457)
T MTH00124 443 PLLLLILKPELIS 455 (457)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999996356724
No 66
>PRK07234 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=519.74 Aligned_cols=387 Identities=21% Similarity=0.294 Sum_probs=307.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHH
Q ss_conf 862999999999999999999986402301589999999999999999999713221----0031676410079999999
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG----IGLGGAYISDRFSYFIKAI 82 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~~~~~~~~----~~~~~~~~~D~~s~~~~~l 82 (478)
|+++.++ +..+|.++++......+.. |+.. . ..................... .+++..+.+|++|..+..+
T Consensus 1 M~~L~il-~I~lP~l~a~~~~llp~~~--r~la-l-~~~ll~~~~~~~l~~~~~~~~~~~~~~~gi~l~vD~lS~~flll 75 (456)
T PRK07234 1 MTSLTIV-WIALPFLLGFAIYLLPKLD--RYLA-L-GVALLSAVYAVGIVASMVPLELVLLDNFGVTLRIDALSGYFILT 75 (456)
T ss_pred CCCHHHH-HHHHHHHHHHHHHHHHHHH--HHHH-H-HHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECHHHHHHHHH
T ss_conf 9707999-9999999999999805305--9999-9-99999999999999953775214358760798865766999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999963210022420667999999999987314610221245777887777665320001344555554
Q gi|254780867|r 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKY 162 (478)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky 162 (478)
..+.+..+..++. ++++.++|+.+++++..++.+++.|+|++++|++||++++++|.||++++ ++++.+|+.||
T Consensus 76 ~~lv~~~v~lys~-----~~~~~~~f~~llll~~~~m~~~f~s~dl~~lfv~~E~~~i~sy~LI~~~~-~~~~~~Aa~ky 149 (456)
T PRK07234 76 NALVTLAVIFYCW-----ESAKTAFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVTYPR-TDRSIWVGLRY 149 (456)
T ss_pred HHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHH
T ss_conf 9999999999970-----77875089999999999999999982699999999999999988643189-89999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 01462046799889885300100000122221110134310000122221123444443211000121012210012333
Q gi|254780867|r 163 FVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTA 242 (478)
Q Consensus 163 ~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sa 242 (478)
++++.+|+.+++.|+.++|..+||+|++++.+..+. +..+++.|+++|+|+||+|.|+||+|+++|+++|+
T Consensus 150 li~~~~g~~~~L~gi~lly~~~Gt~~~~~l~~~~~~---------~~~li~~g~~~K~a~fP~H~WLPda~~~ap~~~s~ 220 (456)
T PRK07234 150 LFLSNVAMLFYLIGAVLVYQANGSFAFSGLAGADPE---------ALALIFLGLLVKGGIFVSGLWLPLTHSEAEPPVSA 220 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHH
T ss_conf 999999999999999999999811999999876478---------99999999999970730387762040689899999
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 32100000232111112440001122210000012221022220000012445443564211124421111112157788
Q gi|254780867|r 243 FLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIV 322 (478)
Q Consensus 243 lls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~ 322 (478)
++|++++|+|+|+++|+.....+ ...++.++|++|+++|++.|+.|+|+||++|||||+|+|||++|.+.+
T Consensus 221 llSg~~vk~Gvy~liR~~~~~~~----~~~il~~lg~~t~l~g~~~Al~Q~DiKrlLAYSsISq~G~il~a~~~g----- 291 (456)
T PRK07234 221 LLSGVVVKAGVFPLVRCALDVYG----LDPVVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----- 291 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_conf 99999999999999999998761----899999999999999999998633136999999999999999999999-----
Q ss_pred HHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 88643002320100110000267874087645502104665232114789999865303665000067599999999962
Q gi|254780867|r 323 AMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR 402 (478)
Q Consensus 323 ~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~ 402 (478)
.+|.++|++.|.++|+++|.+.++++ +||++|++|+.|+||.+ ++.+|++|+||++||+|||+++++..
T Consensus 292 --~~~~l~Hal~Ka~LFl~aG~i~~~~~--t~~i~~~gGl~~~mPl~-----i~~lsi~GiPp~~GF~sK~lil~~~~-- 360 (456)
T PRK07234 292 --GLYALAHGLVKSTLFLCAGALPSRNF--KELIQKMIGRGKWIPLV-----MASFSISGFPLLAGFVAKALTLKNLL-- 360 (456)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHCCHHHHHHHH-----HHHHHHHCCCCCCHHHHHHHHHHHHH--
T ss_conf --99999999999999999989998248--74599838868898999-----99999870542038999999998778--
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 849999999999999999999999999649987
Q gi|254780867|r 403 EFYVLAIVALLSSVISAYYYLRVISIMWFDQST 435 (478)
Q Consensus 403 ~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~ 435 (478)
.|......++++.|+.|+.|+++..|+++++
T Consensus 361 --~w~~~~~~ia~v~ta~~~~r~i~~~~~~~~~ 391 (456)
T PRK07234 361 --PWQAIALNIAAVGTAASFAKFIFLPFFESEK 391 (456)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf --8999999999999999999999999742467
No 67
>MTH00110 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=512.99 Aligned_cols=413 Identities=17% Similarity=0.214 Sum_probs=350.5
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 99997132210031676410079999999999999999999999632100-22420667999999999987314610221
Q gi|254780867|r 54 FFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-SCFEFPVIMLMAVLGMLCMISANDMISFY 132 (478)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~~f~~l~l~~~~g~~~~~~s~~l~~~~ 132 (478)
...........+++..+..|..|..+..+......+...++..+.++++. +++.|+.++++...++++.+.++|++.+|
T Consensus 40 ~~~~~~~~~~~~~~~~~~~D~lS~~li~Ls~~i~~l~~laS~~~~~~~~~~~~~~f~~~~l~l~~~l~~~F~~~dl~~FY 119 (459)
T MTH00110 40 LLLNQLNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQNHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFY 119 (459)
T ss_pred HHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99956787764311576014868999999999999999996898841751256799999999999999999984899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 24577788777766532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 133 MSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 133 v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
++||.+.+|+|.+|+.|++++|+.+|+.||++++.+||..+++++..+|..+||+|+..+.....+.+...........+
T Consensus 120 iffE~~LIP~~~LI~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (459)
T MTH00110 120 ILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLAC 199 (459)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999999999984995799999999999999999999999999999759860999998875145047999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 12344444321100012101221001233332100000232111112440001122210000012221022220000012
Q gi|254780867|r 213 LVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQ 292 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q 292 (478)
+.||++|+|++|+|.||||||+|||+++|++++++..|.|+|+++|+.....+........+..+++.+++++++.|++|
T Consensus 200 ~laF~vK~p~fp~H~WLP~AhveAP~~gSmiLAgvLlKlG~YGl~R~~~~~~~~~~~~~~~~i~l~l~g~i~~s~~~l~Q 279 (459)
T MTH00110 200 MMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNPLTEFMAYPFLMLSLWGMIMTSSICLRQ 279 (459)
T ss_pred HHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999974888886657253250975999999999999989999999999847899999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
Q ss_conf 4454435642111244211111121-577888864300232010011000026787408764550210466523211478
Q gi|254780867|r 293 KDLKRLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTC 371 (478)
Q Consensus 293 ~d~KrllAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~ 371 (478)
+|+||++|||||+|||+++.|+..+ ..|..|++.|+++|++.|+++|..+|.+++|++ +||++++||+.+++|.++.
T Consensus 280 ~DlK~LiAYSSVsHMG~v~~gi~~~~~~g~~Ga~~~miaHgl~ss~LF~lag~~y~r~~--tR~l~~~~Gl~~~~P~~~~ 357 (459)
T MTH00110 280 TDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIH--SRTMILARGLQTLLPLMAT 357 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEHHHHCCHHHHHHHHHH
T ss_conf 99999999977999999999999755899999999999999999999998879988618--6067871980456589999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHH
Q ss_conf 999986530366500006759999999996284999999999999999999999999964998778655---67332189
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV---VAKEMRLF 448 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~---~~~~~~~~ 448 (478)
.+.++.++..|+||++||+||+.++.+.++.+ ++......+++++++.|.++.+...+.|+..+.... .+.++...
T Consensus 358 ~~~l~~lan~g~Pp~~~F~gE~~il~~~~~~~-~~~~~~~~~~~~lsa~Ysl~l~~~~~~G~~~~~~~~~~~~~~re~~~ 436 (459)
T MTH00110 358 WWLLASLTNLALPPTINLIGELFVIMSSFSWS-NITIILMGLNIVITALYSLYMLITTQRGKLTHHINNIKPSFTRENTL 436 (459)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999998717987464899999999999985-99999999999999999999999987799802124789960889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999997676589
Q gi|254780867|r 449 IFGSILFVTGYFLIENILNSS 469 (478)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~ 469 (478)
+....+.....+++|+++.++
T Consensus 437 ~~~h~~pl~~l~l~P~~ilg~ 457 (459)
T MTH00110 437 MALHLLPLLLLSLNPKIILGP 457 (459)
T ss_pred HHHHHHHHHHHHHCHHHHHCC
T ss_conf 999999999999787987189
No 68
>MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=502.81 Aligned_cols=386 Identities=18% Similarity=0.226 Sum_probs=324.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+.++..|.+|..+..++..++..+..++..|+.++++. .||+.+++++..+|+.++.|+|+++++++||.+++.+|.
T Consensus 100 ~i~~sf~~D~~S~~F~~vvl~Vs~sI~~fS~~YM~~Dp~~-~rF~~~l~lF~~sM~~Lv~s~Nl~~lfiGWeGvGl~Sfl 178 (631)
T MTH00208 100 SFSLSFIFDFYFNLFFSVALIVTWSIIEFSHYYMSNDPNK-NAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFL 178 (631)
T ss_pred CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5063121694299999999999999999967870089992-169999999999999999971399999999999999989
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|.+|+++.+|++|.+++||+||..+++++.+.....||+|++++........ .... .....+++|...|+||+|
T Consensus 179 LI~~w~~r~~a~~aal~a~l~NRiGD~glll~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~-~~~~~l~laa~~KSAQfp 256 (631)
T MTH00208 179 LISWWTTRSDANSSALQAVIYNRIGDIGLLLFFSLSLLNFNSWNLSEILLINNNNS-FLIN-LLLFGLLLAAAGKSAQFG 256 (631)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC-HHHH-HHHHHHHHHHHHHHCCCC
T ss_conf 67664795899999999999998879999999999999958812999998705530-4899-999999999986523075
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCE-ECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000121012210012333321000-0023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIP-KFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~-~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
+|.|||||+| +||||||++|+.+ +++|+|.++|+.+.+.. .+.....+.++|.+|+++++..|+.|+|+||++||||
T Consensus 257 lh~WLP~AMe-gPTPVSALlHssTmVtAGVyLliR~~p~~~~-~~~~~~~~l~iG~~T~l~a~~~Al~q~DiKkIiA~ST 334 (631)
T MTH00208 257 LHPWLPAAME-GPTPVSALLHSSTMVVAGVFLLIRTSPLYSN-SPFFNSWCLILGGITALFAASTAISQHDIKKIVAYST 334 (631)
T ss_pred CCCCCHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7421056646-9981888885657876216664210751430-0999999999999999999999999987887874110
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
.+|+|+|+.++|.+.. ..+++|...|++.|+.+|+|+|.+.+..+ ++||+|++||+.+++|.++.|+.++.++++|+
T Consensus 335 ~SQLG~M~~~iglg~~--~la~fHl~tHA~FKAlLFLcaGsiIH~~~-~~QDiRkMGgl~~~~P~t~~~~~igslaL~G~ 411 (631)
T MTH00208 335 TSQLGLMVVAIGLGQP--IIAFFHICTHAFFKAMLFLCSGSIIHSLN-DEQDIRKMGGLSFLLPVTSACIILGSLALSGT 411 (631)
T ss_pred HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 3078999999971308--89999999999999999982338998268-74479986798642739999999999998286
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHH
Q ss_conf 500006759999999996284999-999999999999999999999964998778655-673321899999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVL-AIVALLSSVISAYYYLRVISIMWFDQSTECVVV-VAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~-~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 458 (478)
||++||+||+.|+|+...++.... ..+.++++.+|+.|..|++...+.++|+..+.. .+|+.+....+...+..+
T Consensus 412 PflsGFySKD~IiE~~~~s~~n~~~~~l~liat~lTa~YS~Rlif~~f~g~~~~~~~~~i~E~~~~m~~Pl~~La~g 488 (631)
T MTH00208 412 PFLAGFYSKDLILEAGLASLSNFLGIILAFLATLLTAVYSFRIIFFCFSLPPSFSPLSPISEENNNLTNALNRLALG 488 (631)
T ss_pred CHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 22211503799999999751079999999999999999999999987447898874111777989899999999999
No 69
>MTH00108 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=499.29 Aligned_cols=380 Identities=19% Similarity=0.250 Sum_probs=320.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+.+..+..|.+|..+..+...++..+..++..|+.++++ ..||+.++.++..+|+.++.|+|+++++++||.+++++|.
T Consensus 75 ~~~~sf~~D~~S~~f~~~vl~Is~~V~~yS~~YM~~d~~-~~rF~~~l~lF~~sMl~LV~s~Nl~~lfiGWEgvGl~Syl 153 (602)
T MTH00108 75 KLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPN-INRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL 153 (602)
T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 528887437438999999999999999997998079989-3659999999999999999972199999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|.+|+++.+|++|.++++|+||..++.++..++...|++|++++.....+ . .......++.|...|+||+|
T Consensus 154 LI~~w~~r~~a~~aa~~a~l~nRiGD~~lll~i~~l~~~~~s~~~~~i~~~~~~--~---~~~~l~~lllaa~~KSAQfP 228 (602)
T MTH00108 154 LIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN--N---LNLPLMGLLLAATGKSAQFG 228 (602)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC--H---HHHHHHHHHHHHHHHHHHCC
T ss_conf 999963986789999999999915689999999999998166229999973552--3---79999999999998652074
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.||||||| +||||||++|+. ++++|+|.++|+.+.+. ..+.....+.++|.+|+++|+..|+.|+|+||++||||
T Consensus 229 fh~WLP~AMe-gPTPVSALlHSsTmV~AGVyLliR~~pl~~-~~~~~~~~~l~lG~~T~l~aa~~Al~q~DiKkiiAyST 306 (602)
T MTH00108 229 LHPWLPSAME-GPTPVSALLHSSTMVVAGVFLLIRFHPLME-NNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFST 306 (602)
T ss_pred CHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5342067635-899099999876899860999999988874-17999999999999999999999985231878999988
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
++|+|+|+.++|.+.. ..+++|..+|++.|+.+|+|+|.+.+..+ ++||+|++||+.+++|.+..++.++.+|++|+
T Consensus 307 ~SQLGlMm~~iglg~~--~lA~fHL~tHA~FKAlLFL~aG~iIH~~~-~~QDir~mGgl~~~~P~t~~~~~i~slaL~G~ 383 (602)
T MTH00108 307 SSQLGLMMVTIGINQP--HLAFLHICTHAFFKAMLFMCSGSIIHNLN-DEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383 (602)
T ss_pred HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9899999999855738--89999999999999999982309998258-85418987597520479999999999998476
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHH
Q ss_conf 5000067599999999962849999-999999999999999999999649987786556733-21899999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE-MRLFIFGSILF 455 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~ 455 (478)
||++||+||+.|+|....++....+ ....+++.+|+.|..|+++..+.++|+..+....+| .+....+...+
T Consensus 384 PflsGFySKD~IlE~~~~s~~n~~~~~l~~~~~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~e~~~~~~~pl~~L 457 (602)
T MTH00108 384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRL 457 (602)
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 32107876899999998656289999999999999999999999999708998888787677967899999999
No 70
>MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=510.13 Aligned_cols=352 Identities=37% Similarity=0.668 Sum_probs=304.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99999998731461022124577788777766532000134455555401462046799889885300100000122221
Q gi|254780867|r 115 AVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT 194 (478)
Q Consensus 115 ~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~ 194 (478)
...|+++++.|+|++++|++||++++++|.+++.+++++++.||++||++++.+|+.++++|+.++|..+|++|++++..
T Consensus 2 ~~lG~l~lv~s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~eAa~KYfi~~~~~s~~lL~gi~lly~~tGs~~~~~l~~ 81 (365)
T MTH00196 2 VALGSLCLISSSNWLSVYLAIELSTLCLFILVAQKGGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGLTGGTHISYIEL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 79999999999899999999999999999998548999899999999999999999999999999999982946999999
Q ss_pred HHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 110134--310000122221123444443211000121012210012333321000002321111124400011222100
Q gi|254780867|r 195 SLFIGH--RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLP 272 (478)
Q Consensus 195 ~~~~~~--~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~ 272 (478)
...+.. .+.....+..+++.|+.+|+|++|||.|+||+|+++|++++++++.++|.+.+..+.++.. ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~li~~~l~~K~~~~PfH~WlPda~~~ap~~~salla~~~K~~~~~il~~~~~--------~~~ 153 (365)
T MTH00196 82 LLNSGQSFSEVRVPIGYLLITVALLFKLSVAPFHMWAPDVYEGAPTTTTALLAIVPKVGVFSILVSIGL--------PVN 153 (365)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--------HHH
T ss_conf 973554440478999999999999998452655567776467998799999999999999999999857--------899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCC
Q ss_conf 0001222102222000001244544356421112442111111215-778888643002320100110000267874087
Q gi|254780867|r 273 IFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN 351 (478)
Q Consensus 273 ~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~ 351 (478)
.+.+.|++|+++|++.|++|+|+||++|||||+|+||+++|++.++ .+..++++|+++|++.+.++|.+++..+ +
T Consensus 154 ~~~~~~~~s~i~G~~~al~Q~dlKrllAYSSIsh~G~i~l~i~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~----~ 229 (365)
T MTH00196 154 ILLVGALFSLFVGALGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESLQASLVYLFLYIIMSICVFSIILALG----V 229 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_conf 999999999999999998643557457668887999999999983178999999999999999999999999998----1
Q ss_pred CCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64550210466523211478999986530366500006759999999996284999999999999999999999999964
Q gi|254780867|r 352 NIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWF 431 (478)
Q Consensus 352 ~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~ 431 (478)
++|+++|++|+.|++|.++.++.++.+|++|+||++||++||+++++..+++.++++.+.+++++++++||+|+++.+|+
T Consensus 230 ~~~~i~~~~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~~~~~~s~ls~~Yylrl~~~~~f 309 (365)
T MTH00196 230 YKNLLVEFSGLSRRLPFLALTLALTFLSIAGIPPLVGFLGKWLVLLSGVVSQYYLIFLLAVVCSVIAGVYYVRIVKIIFF 309 (365)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 47899999717887399999999999998653534458999999999998687999999999999999999999999990
Q ss_pred CCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99877865---------567332189999999999999997676589999987519
Q gi|254780867|r 432 DQSTECVV---------VVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 432 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
++++.... +.+..+...+......+.+++++|+++.+.....+.++|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~i~~~~i~P~~ll~~~~~~~~~l~ 365 (365)
T MTH00196 310 QANSFLLISTKALKKENKINLRKALLIGASLYLIGFTILSPNLLFQLAHWAIGGLF 365 (365)
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_conf 89975433326540136775889999999999999998587999999999987519
No 71
>MTH00205 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=498.75 Aligned_cols=405 Identities=18% Similarity=0.227 Sum_probs=349.5
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 71322100316764100799999999999999999999996321002242066799999999998731461022124577
Q gi|254780867|r 58 IMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLEL 137 (478)
Q Consensus 58 ~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~ 137 (478)
.......+.+..+..|..|..+..+..........++..+.++++ ++++|+.+.++...++.+++.++|++.+|++||.
T Consensus 42 ~~~~~~~~is~~~~~D~lS~~li~Lt~~i~~l~~l~S~~~~~~~~-~~~~f~~l~lll~~~li~~F~s~dll~FyiffE~ 120 (452)
T MTH00205 42 NISLGESSISSSFSVDSVSLPLIMLSFWISVLMILSSFFILKSSN-NSSLFTVTVIMLCLILILSFSSDNLLLFYILFEA 120 (452)
T ss_pred CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 112042213488810172599999999999999998779986462-0579999999999999999999789999999999
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78877776653200013445555540146204679988988530010000012222111013431000012222112344
Q gi|254780867|r 138 QSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLF 217 (478)
Q Consensus 138 ~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~ 217 (478)
..+|+|.+|+.|++++|+.+|+.|+++++.+||..++.|+..+|..+|+.++.+..+................+++.|++
T Consensus 121 ~LIP~~lLI~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~laF~ 200 (452)
T MTH00205 121 SLIPTLILIMVWGYQPERLQASMYMLLYTLFASLPLLIGIIFFSDLNFHSSMFFMMDMGIGWSSDLVLSLYWIFCMLAFL 200 (452)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999987099878999999999999998999999999999992995199999887644416899999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44432110001210122100123333210000023211111244000112221000001222102222000001244544
Q gi|254780867|r 218 FKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKR 297 (478)
Q Consensus 218 ~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Kr 297 (478)
+|.|++|+|.|+||||+|||+++|++++++.+|.|+|+++|+..+..+....+...+..+|++++++|++.|++|+|+||
T Consensus 201 vK~Plfp~H~WLP~Ah~eAP~~~S~ilagvllK~G~ygl~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~Q~D~K~ 280 (452)
T MTH00205 201 VKMPLYLTHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVSMILYSVNYKVSELFFSVSLLGGVMTSMICLRQSDLKS 280 (452)
T ss_pred HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86015015030735325398189999999999861889999988730458999999999999999999999999987889
Q ss_pred CCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHH
Q ss_conf 35642111244211111121-57788886430023201001100002678740876455021046652321147899998
Q gi|254780867|r 298 LMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIF 376 (478)
Q Consensus 298 llAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~ 376 (478)
++|||||+|+|+++.|+..+ ..|..|+++|+++|++.|+++|..+|.+++|++ +|++.++||+.+++|..+..+.+.
T Consensus 281 liAYSSvshmG~v~~g~~~~~~~g~~ga~~~mi~Hgl~s~~LF~lag~~y~r~~--tR~i~~~~Gl~~~~P~~~~~~~l~ 358 (452)
T MTH00205 281 LIAYSSVGHMGLMVVGVVSMTSWGYNGAIIMMVAHGLCSSGMFCLANNWYERSN--SRSMMMTKGMLNIFPSLVLFWFLL 358 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 999943999818999999872999999999999999888999997515674448--699888498387889999999999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHH
Q ss_conf 653036650000675999999999628499999999999999999999999996499877865---56733218999999
Q gi|254780867|r 377 LFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSI 453 (478)
Q Consensus 377 ~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~ 453 (478)
.++..|.||+.||+||+.++.+.++.+ ++..++..+++++++.|.+|.++..+.|+..+..+ +.+.++........
T Consensus 359 ~~~n~g~Pp~~nF~gE~~i~~~~~~~~-~~~~~~~~~~~~lsa~Ysl~l~~~~~~G~~~~~~~~~~~~~~re~~~l~~h~ 437 (452)
T MTH00205 359 FSCNMSAPPSINLLSEIGLAMSLLSSS-KVSGVPLALISFFVGVYSMYLYSQSSHGSVSSQFSSFLEIKEVEYFVGALHW 437 (452)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 999872551261999999999999987-9999999999999999999999997569983530038997267999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999997676
Q gi|254780867|r 454 LFVTGYFLIENIL 466 (478)
Q Consensus 454 ~~~~~~~~~~~~~ 466 (478)
+-....+++|.++
T Consensus 438 ~Pl~~l~l~p~l~ 450 (452)
T MTH00205 438 FPLFILILVPKIF 450 (452)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999848887
No 72
>MTH00127 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=496.32 Aligned_cols=403 Identities=15% Similarity=0.182 Sum_probs=342.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002-24206679999999999873146102212457778877
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFS-CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~-~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
...+..+.+|..|..+..+......+....+.++.+.++.+ ++.|+.+.++...++.+++.|.|++.+|++||...+|+
T Consensus 51 ~~~~~~lg~D~lS~~li~Lt~~l~~l~ilaS~~~~~~~~~~~~~~f~~l~l~l~~~li~~F~s~dl~lFYiffE~~LIP~ 130 (459)
T MTH00127 51 SSLNPYMATDPLSTPLLVLTCWLLPLMILASQNHTSPEPINRQRTYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPT 130 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57639983768799999999999999999955886216200588999999999999999999978999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|.+|..|++|+|+.+|+.|+++++.+||..+++++..+|..+||+++.++...................++.||++|+++
T Consensus 131 ~~LI~~WG~q~eR~~A~~~~l~YTl~gSl~lL~~i~~l~~~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~~laF~vK~Pl 210 (459)
T MTH00127 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWGDKLWWAGCLLAFLVKMPL 210 (459)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999828948899999999999999999999999999985588409999874330120478999999999999996588
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11000121012210012333321000002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
||+|.|+||||.|||+++|++++++..|.|+|+++|+.....+........+..+++.+++++++.|++|+|+||++|||
T Consensus 211 fp~H~WLPkAHvEAP~~gSmiLAgvLlKlG~YGliR~~~~l~p~~~~~~~~~i~l~l~g~i~~slicl~Q~DlK~liAYS 290 (459)
T MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290 (459)
T ss_pred CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88866583643519749999999999988899999999988588999999999999999999999999801768998886
Q ss_pred CCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 111244211111121-5778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 303 SIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 303 si~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||+|||+++.|+... ..|..|+++|+++|++.++++|..+|.+++|++ +|+++++||+.+++|.++..+.++.++..
T Consensus 291 SVsHMG~v~~gi~~~~~~g~~Gal~~miaHGl~ss~LF~lag~~y~r~~--tR~i~~~~Gl~~~~P~~~~~~~l~~lan~ 368 (459)
T MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTH--SRTMLLARGLQMILPLMATWWFIASLANL 368 (459)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 6999999999999766778999999999999999999999999999517--61588839978775899999999999872
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHH
Q ss_conf 6650000675999999999628499999999999999999999999996499877865---5673321899999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 458 (478)
|+||++||+||+.++.+.++.+ ++...+..+++++++.|.++.+...+.|+..+..+ +.+.++...+....+-...
T Consensus 369 glPp~~nF~gE~~i~~~~~~~~-~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~~~~~~~~~~~rE~~~l~~h~~pl~l 447 (459)
T MTH00127 369 ALPPLPNLMGELMIITSLFNWS-PWTLALTGAGTLITAGYSLYMFLMTQRGPLPAHIIALEPSHTREHLLMALHLIPLLL 447 (459)
T ss_pred CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7987464889999999999985-999999999999999999999999664998040236899727899999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99997676589
Q gi|254780867|r 459 YFLIENILNSS 469 (478)
Q Consensus 459 ~~~~~~~~~~~ 469 (478)
.++.|++...+
T Consensus 448 l~l~p~li~~w 458 (459)
T MTH00127 448 LILKPELIWGW 458 (459)
T ss_pred HHHHHHHHHCC
T ss_conf 99919999406
No 73
>MTH00165 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=491.24 Aligned_cols=390 Identities=18% Similarity=0.257 Sum_probs=318.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 10031676410079999999999999999999999632100224206679999999999873146102212457778877
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
..+.+..+..|..|..+...+..++..+..++.+|+.++++. .||+.++.++..+|.+++.|+|+++++++||.+++++
T Consensus 41 ~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~-~rF~~~l~lFv~sM~~lv~s~nl~~l~lgWEglGl~S 119 (571)
T MTH00165 41 SSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI-NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVS 119 (571)
T ss_pred CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 706388773485289999999999999999988983799984-2899999999999999999804999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|.||.+++ ++++.+|+.++++.+|+||..++.++.+.+. .||+|+........+. ........+++.|...|+||
T Consensus 120 ylLI~fy~-~~~s~~a~~~t~l~nRiGD~~ll~~i~~~~~-~gs~~~~~~~~~~~~~---~~~~~~~~ll~laa~~KSAQ 194 (571)
T MTH00165 120 YCLVIYYQ-NVKSYNAGMLTALSNRIGDVAILLSIAWMLN-FGSWNFIFYLDSMSNS---FEMLLIGFLIILAAMTKSAQ 194 (571)
T ss_pred HHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHCC
T ss_conf 99981368-8689999999999998769999999999999-5772699998763033---08999999999999887321
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1100012101221001233332100-000232111112440001122210000012221022220000012445443564
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAY 301 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAy 301 (478)
+|||.||||||| |||||||++|+. ++++|+|.++|+.+...+ +.+...+.++|.+|+++|++.|+.|+|+||++||
T Consensus 195 ~Pfh~WLP~AM~-aPTPVSALvHssTlVtAGvylliR~~~~~~~--~~~~~~l~~ig~~T~l~a~~~Al~q~DiKkiiAy 271 (571)
T MTH00165 195 IPFSAWLPAAMA-APTPVSALVHSSTLVTAGVYLLIRFNPLLSG--SFFSKLLLLISSLTMFMAGLGANFEFDLKKIIAL 271 (571)
T ss_pred CCCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 776221167645-8972899998768998889999998898521--6899999999999999999999976407789898
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 21112442111111215778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 302 SSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 302 Ssi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||++|+|+|+.+++.+... .+++|.++|++.|+.+|+++|.+.+..+ ++||+|++||+.+++|.+..++.++.+|++
T Consensus 272 ST~SQlG~M~~~~glg~~~--la~fHl~~HA~fKAlLFl~aG~vIh~~~-~~qDir~mggl~~~~P~t~~~~~i~~lsL~ 348 (571)
T MTH00165 272 STLSQLGLMMSILSLGFYK--LAFFHLLTHALFKALLFMCAGVIIHSMG-GSQDIRFMGGLSKSMPLTSSCFNVSNLALC 348 (571)
T ss_pred HHHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7898999999999805599--9999999999999999983329999727-973088866965424699999999999985
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 665000067599999999962849-9999999999999999999999996499877865567332189999999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYF 460 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (478)
|+||++||+||+.++|....++.. +...+..+++.+|..|..|.+...+.++++.+......+++..+...........
T Consensus 349 G~PflsGFySKD~IlE~~~~~~~~~~~~~~~~~~~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~~~~~~m~~pl~~L~~~s 428 (571)
T MTH00165 349 GFPFLAGFYSKDLILEMVFMSNLNMFSFLLFIFSTGLTVSYSFRLMYYSMTGDFNLSSLNNLSDESYIMLKSMILLLFMS 428 (571)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 35054189888999999987445599999999999978999999999998189989878618889898999999999999
Q ss_pred HHHH
Q ss_conf 9976
Q gi|254780867|r 461 LIEN 464 (478)
Q Consensus 461 ~~~~ 464 (478)
+..|
T Consensus 429 i~~G 432 (571)
T MTH00165 429 IFGG 432 (571)
T ss_pred HHHH
T ss_conf 9999
No 74
>MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=484.23 Aligned_cols=388 Identities=20% Similarity=0.252 Sum_probs=316.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
...+..+..|..|..+...+..++..+..++..|+.++++. .||+.++.++..+|++++.|+|+++++++||.+++++|
T Consensus 43 ~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~-~rF~~~l~lFv~sMl~Lv~s~Nl~~l~lGWeglGl~Sy 121 (565)
T MTH00209 43 MSISFPLIIDWMSLSFSSVVLFISGSVMWFSNFYMAGEKFP-NRFCLITLLFVLSMNFLIFVPNLISLLLGWDGLGLVSF 121 (565)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 27387520584289999999999999999989970599981-25999999999999999998159999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||.++.+ +++.+|+.|+++.||+||..++.++.... ..|++++.+.... .........+++.|...|+||+
T Consensus 122 lLI~~y~~-~~s~~a~~~t~l~nRiGD~~lll~i~~~~-~~~~~~~~~~~~~------~~~~~~i~lll~laa~~KSAQ~ 193 (565)
T MTH00209 122 CLVIYYQN-SKSLSAGMITILSNRVGDACLILSIAGML-CFGNWNIFTLNYQ------KGIGIVLSVLMVVAAMTKSAQI 193 (565)
T ss_pred HHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99754097-69999999999999999999999999999-9763999999885------2289999999999998762207
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100-0002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.||||||+ |||||||++|+. ++++|+|.++|+.+.... .+.....+..+|.+|+++|++.|+.|+|+||++|||
T Consensus 194 Pfh~WLP~AMa-aPTPVSALvHssTlVtAGVylliR~~~~~~~-~~~~~~~ll~ig~~T~~~a~~~Al~q~DlKkiiA~S 271 (565)
T MTH00209 194 PFSAWLPAAMA-APTPVSALVHSSTLVTAGVYLMIRFSDQFFS-SPFVGWYVLLIGSLTTLMASMVANFESDLKKVIALS 271 (565)
T ss_pred CCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67311278746-9980999999879999767766450388774-599999999999999999999998444052576624
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|++|+|+|+.+++.+.. ..+++|.++|++.|+.+|+++|.+.+..+ ++||+|++||+.+++|.+..++.++.+|++|
T Consensus 272 TlSQLG~M~~~iglg~~--~~a~fHL~~HA~fKalLFl~aG~vIh~~~-~~QDir~mggl~~~~P~t~~~~~i~~lsL~G 348 (565)
T MTH00209 272 TLSQLGLMMCSISLGGP--ELCLFHLVTHALFKALLFICAGNMIHSHG-HSQDIRSVGMLWYQMPITSICLNISNLALCG 348 (565)
T ss_pred HHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHCCHHHHCCC-CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 89899999999976719--99999999889999999970407886058-8641887559975229999999999999856
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 65000067599999999962849999-99999999999999999999964998778655673321899999999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFL 461 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (478)
+||++||+||+.|+|....++..... .+..+++.+|..|..|.+...+.++++.+......|....+..........-+
T Consensus 349 ~PflsGFySKd~Ile~~~~~~~~~~~~~~~~~~~~~T~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~p~~~L~~~Si 428 (565)
T MTH00209 349 IPFLAGFYSKDLILESMLESKINFMTLIMFFIATALTVSYSLRMSYFSLWGSNSSKSLSSLLEENKDMLKPMLVLTLGSI 428 (565)
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 61640899999999999877627999999999999999999999999981899998723064477358999999999999
Q ss_pred HHHH
Q ss_conf 9767
Q gi|254780867|r 462 IENI 465 (478)
Q Consensus 462 ~~~~ 465 (478)
..|.
T Consensus 429 ~~G~ 432 (565)
T MTH00209 429 VGGS 432 (565)
T ss_pred HHHH
T ss_conf 9999
No 75
>MTH00163 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=480.01 Aligned_cols=372 Identities=21% Similarity=0.245 Sum_probs=324.5
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 97132210031676410079999999999999999999999632100224206679999999999873146102212457
Q gi|254780867|r 57 LIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLE 136 (478)
Q Consensus 57 ~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E 136 (478)
..........+..+..|..|..+..+..........++..+...++ ++++|+.+.++...++.+++.++|++.+|++||
T Consensus 39 ~~~~~~~~~~s~~f~~D~lS~~li~Ls~~I~~l~~l~S~~~~~~~~-~~~~f~~l~l~l~~~l~~~F~s~nl~~FyiffE 117 (446)
T MTH00163 39 LSSGSYFSNISYFFGVDLLSFGLILLSLWICLLMILSSESVYKYNN-YSNLFLFLVLLLLLFLFLTFSSMNLLLFYIFFE 117 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7323488777499820786899999999999999999668874264-068999999999999999999968999999999
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 77887777665320001344555554014620467998898853001000001222211101343100001222211234
Q gi|254780867|r 137 LQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGL 216 (478)
Q Consensus 137 ~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~ 216 (478)
...+++|.+|..|++++++.+|+.|+++++.+|+..++.++..+|..+|++++........ .......+++.|+
T Consensus 118 ~~lip~~~LI~~wG~~~er~~A~~y~~~yt~~~Sl~lL~~i~~l~~~~gs~~~~~~~~~~~------~~~~~~~~~~laF 191 (446)
T MTH00163 118 SSLIPTLILILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNSLGSLSFYLLNSFGF------NSFLLYLSMILAF 191 (446)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH------HHHHHHHHHHHHH
T ss_conf 9999999999983897788999999999999999999999999999727237999987577------9999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44443211000121012210012333321000002321111124400011222100000122210222200000124454
Q gi|254780867|r 217 FFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLK 296 (478)
Q Consensus 217 ~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~K 296 (478)
++|.|++|+|.|+||||+|||+++|++++++..|.|+|+++|+.+...+....+...+..+|++++++|++.|++|+|.|
T Consensus 192 ~vK~p~fp~H~WLP~AhveAP~~gSmiLAgvllKlG~YGliR~~~~~~~~~~~~~~~l~~l~l~~~~~~sl~al~Q~DlK 271 (446)
T MTH00163 192 LVKMPMFLVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMPLFSSLGLKFSYIWISISLVGGVLVSLICLRQTDLK 271 (446)
T ss_pred HHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99648044634050655238814689999999988887789999870005789999999999999999999999876378
Q ss_pred CCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHH
Q ss_conf 435642111244211111121-5778888643002320100110000267874087645502104665232114789999
Q gi|254780867|r 297 RLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTI 375 (478)
Q Consensus 297 rllAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i 375 (478)
|++|||||+|+|+++.|+... ..|..|++.|+++|++.|+++|..+|.+++|++ +|++.++||+.+++|.++..+.+
T Consensus 272 ~LiAYSSVsHMG~v~~gi~~~~~~g~~gal~~mi~Hgl~ss~LF~~~g~~y~~~~--sR~i~~~~Gl~~~~P~l~~~~~l 349 (446)
T MTH00163 272 SLIAYSSVAHMGLVLGGLMTFSYWGLNGSLLMMIAHGLCSSGLFCLANIVYERLG--SRSLLINKGLLNFMPSMSLWWFL 349 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCCHHHHHHHHHHHHH
T ss_conf 9999988999999999999825999999999999999999999999999999707--62299849947662899999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 865303665000067599999999962849999999999999999999999999649987786
Q gi|254780867|r 376 FLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECV 438 (478)
Q Consensus 376 ~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~ 438 (478)
+.++..|.||+.||+||+.++.+.++.+ ++......+++.+++.|.++.+.....|+..+..
T Consensus 350 ~~~~n~g~Pp~~~F~gE~~i~~s~~~~~-~~~~~~~~~~~~ls~~Ysl~ly~~~~hG~~~~~~ 411 (446)
T MTH00163 350 LSSSNMAAPPSLNLLGEISLLNSILSWS-WLSMIMLMLLSFFSAAYSLYLYSYSQHGKYYSGL 411 (446)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf 9999844787441999999999999996-9999999999999999999999996569975632
No 76
>MTH00151 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=480.73 Aligned_cols=387 Identities=17% Similarity=0.262 Sum_probs=316.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
.+.+..+..|..|..+...+..++..+..++..|++++++. .||+.+..++..+|.+++.|+|++.++++||.+++++|
T Consensus 46 ~~~~~~~~~D~~S~~F~~~V~~Is~~V~~yS~~YM~~d~~~-~rF~~~~~lFv~sM~~lv~s~Nli~l~lgWEglGl~Sy 124 (566)
T MTH00151 46 CSFSFDLVLDWVSLSFSGVVCLISGCVFLFSDSYMKEDPFL-KRFMWLVMLFVLSMNLLIFIPSLFSLLLGWDGLGIVSF 124 (566)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 47387520683189999999999999999988970689980-27999999999999999998379999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||.++.++ ++.+|+.|+++.+|+||.+++.++... ...|++++...... ... .....++..|...|+||+
T Consensus 125 lLI~~y~~~-~s~~ag~~t~l~nRvGD~~ll~~i~~~-~~~g~~~~~~~~~~------~~~-~~~~~~l~~a~~tKSAQ~ 195 (566)
T MTH00151 125 LLVIYYQNK-KSLSAGMLTVLTNRIGDVFILISISLF-VLLGHWSILCMWDF------ELF-GLLGLFLVLAGMTKSAQI 195 (566)
T ss_pred HHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHH-HHHHHHHHHHHHHHHHHC
T ss_conf 998770982-899999999999988899999999999-99966999988655------789-999999999999875007
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100-0002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.|||+||+ |||||||++|+. ++++|+|.++|+.+... ..+.....+.++|.+|++++++.|+.|+|+||++|||
T Consensus 196 Pf~~WLP~AMa-aPTPVSALvHSsTmVtAGvylliR~~~~~~-~~~~~~~~ll~ig~~T~l~a~~~A~~q~DiKkiiA~S 273 (566)
T MTH00151 196 PFSSWLPAAMA-APTPVSALVHSSTLVTAGVFLIIRFFYYLS-SSPGFSSFLLFISLLTLLMAGVSAVYEYDLKKIIALS 273 (566)
T ss_pred CCCHHHHHHHC-CCCCHHHHHHCCHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77230267626-999467776011343534889998627875-0699999999999999999999999654176687772
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|++|+|+|+.+++.+.. ..+++|.++|++.|+.+|+|+|.+.+.. +++||+|++||+.+++|.+..++.++.+|++|
T Consensus 274 TlSQLG~M~~~lglg~~--~la~fHL~~HA~FKalLFl~aG~vIh~~-~~~QDir~mggl~~~~P~t~~~~~i~~lsL~G 350 (566)
T MTH00151 274 TLSQLGVMMFSLGLGMP--MLALFHLYTHALFKALLFLCAGNIIHCY-SGKQDIRQLGSLFSLLPVTSWFLNVSNMSLCG 350 (566)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 79888999999865208--8999999875899999999768999715-63315998579865439999999999999873
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6500006759999999996284999-999999999999999999999964998778655673321899999999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFYVL-AIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFL 461 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~~~-~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (478)
+||++||+||+.+++....++...+ ..+..+++.+|..|..|.+...+.++++.+......|+...+...........+
T Consensus 351 ~PflsGFySKD~Ile~~~~~~~n~~~~~~~~~s~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~p~~~L~~~si 430 (566)
T MTH00151 351 APFLSGFYSKDLILESMLFSNMNLLMVLLGLVGVCLTALYSARLSFFVLWGSPTSNSYSNSSDEDLYVSFPMLLLSIGAI 430 (566)
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 52650998889999999974058999999999999999999999999980899888776776687778999999999999
Q ss_pred HHHH
Q ss_conf 9767
Q gi|254780867|r 462 IENI 465 (478)
Q Consensus 462 ~~~~ 465 (478)
..|.
T Consensus 431 ~~G~ 434 (566)
T MTH00151 431 VGGF 434 (566)
T ss_pred HHHH
T ss_conf 9999
No 77
>MTH00207 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=474.57 Aligned_cols=391 Identities=16% Similarity=0.230 Sum_probs=317.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
...+..+..|..|..+...+..++..+..++.+|+.++++ ..||+.++.++..+|.+++.|+|+++++++||.+++++|
T Consensus 47 ~~~~~~~~~D~~S~~F~~~v~~Is~~V~~YS~~YM~~d~~-~~RF~~~l~lFv~sM~~Lv~s~Nl~~l~lgWeglGl~Sy 125 (572)
T MTH00207 47 SPINFPIIFDPTGTLFSSTVLFISANVLKFATIYMKDDKF-LNRFISLVLLFVLSMNMLIFFPHLMTLLLGWDGLGLVSF 125 (572)
T ss_pred CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3639751078338999999999999999998887358989-135999999999999999998009999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
.||.++ +++++.+|+.+.++.+|+||..++.++.... ..|+++..+.... + .......++++|...|+||+
T Consensus 126 lLI~~y-~~~~s~~a~~~t~l~nRiGD~~ll~~i~~~~-~~~~~~~~~~~~~----~---~~~~~~~~l~l~a~tKSAQ~ 196 (572)
T MTH00207 126 ILVIYY-QNPKSLAAGMITALTNRIGDVMLLLSIGWTL-NQGHWSITNMWAT----D---MSNLIILAITIAAMTKSAQM 196 (572)
T ss_pred HHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH----H---HHHHHHHHHHHHHHHHHHHC
T ss_conf 998256-9889999999999999988999999999999-8047999999864----0---68999999999997763017
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100-0002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
|||.|||||++ |||||||++|+. ++++|+|.++|..+... ..+.....+.++|.+|+++|++.|+.|+|+||++|||
T Consensus 197 Pfh~WLP~AM~-aPTPVSALvHSsTmVtAGVyLliR~~~~~~-~~~~~~~~l~~ig~~T~l~a~~~A~~q~DlKkiiA~S 274 (572)
T MTH00207 197 PFSSWLPAAMA-APTPVSALVHSSTLVTAGVFLLIRFYPFLS-STTWFNPTLLLIASMTMLMAGLSAMTECDMKKIIALS 274 (572)
T ss_pred CCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67231367617-998199999999999978999988527644-1299999999999999999999999862240244411
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
|++|+|+|+.++|.+.. ..+++|.++|++.|+.+|+|+|.+.+..+ ++||+|++||+.+++|.+..++.++.+|++|
T Consensus 275 TlSQLG~M~~~lglg~~--~la~fHL~~HA~FKAlLFl~aG~iIh~~~-~~QDiR~mGgl~~~~P~t~~~~~i~~lsL~G 351 (572)
T MTH00207 275 TLSQLGVMMASLGLGMP--KLAFFHLLTHALFKALLFICAGSIIHSHH-HSQDLRWMGNLTNQMPLTTSCLLIANLALCG 351 (572)
T ss_pred HHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 39899999999867879--99999998899999999981069997147-9860998759865448999999999999828
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6500006759999999996284999-999999999999999999999964998778655673321899999999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFYVL-AIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFL 461 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~~~-~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (478)
+||++||+||+.|+|..+.++.... ..+..+++.+|..|..|.+...++++++.+.....+|.+..+..........-+
T Consensus 352 ~PflsGFySKD~IlE~~~~~~~n~~~~~l~~~s~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~L~~~si 431 (572)
T MTH00207 352 SPFLSGFYSKDMIIESSLFYPNNSLIILMFIFATALTAAYSTRFMLTVIWSPNSSAPYHHLEDNDLNLTTPMLLLTLGAI 431 (572)
T ss_pred CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 87201463279999999977207999999999999999999999999980899998765187898889999999999999
Q ss_pred HHHHHHHH
Q ss_conf 97676589
Q gi|254780867|r 462 IENILNSS 469 (478)
Q Consensus 462 ~~~~~~~~ 469 (478)
..|...++
T Consensus 432 ~~G~~l~w 439 (572)
T MTH00207 432 TSGAALNW 439 (572)
T ss_pred HHHHHHHH
T ss_conf 99999998
No 78
>PRK06459 hydrogenase 4 subunit B; Validated
Probab=100.00 E-value=0 Score=474.85 Aligned_cols=356 Identities=19% Similarity=0.304 Sum_probs=297.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76410079999999999999999999999632100224206679999999999873146102212457778877776653
Q gi|254780867|r 69 AYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 69 ~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
..+.|+++.+|..++.+++....+|+.+| +++ .+.+..++.++..||++++.|+|.++++++||+|++++|+||..
T Consensus 38 ~~~~~pl~~ff~iii~~v~~~~~~ySi~Y--~~~--~~~~~~l~~lFi~sMllvv~a~n~~~F~v~WElMsL~Sy~LI~~ 113 (578)
T PRK06459 38 GIQEYPYLSFFYIIAGLVWVLASLYSLSY--DYY--GKWLSMLYSLTVLGMIIVLTSDNYLEFLAGWETMTIPSYVIIAL 113 (578)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHCCH--HHH--HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99827499999999999999999992114--425--15999999999999999999730999999999999999999997
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-
Q ss_conf 2000134455555401462046799889885300100000122221110134310000122221123444443211000-
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHM- 227 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~- 227 (478)
+++++ +++.+|+.++++|+.+++.|+.++|..+||+|++++.+. ..+.+...|++.|+|++|||.
T Consensus 114 ~~~~~---~aa~~y~~~~~~G~~~ll~~~~ll~~~~Gs~~f~~~~~~-----------~~~lL~~~GFg~KaG~~Pfhvh 179 (578)
T PRK06459 114 YRKDW---KPAFTFMAFGELSTVLILAGFALAYSQTGSFNFERLSTQ-----------VPLIITSFGFIIKMGMFPFLVS 179 (578)
T ss_pred CCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHH-----------HHHHHHHHHHHHHHCCCCCHHH
T ss_conf 05550---078999999999999999999999998088248877878-----------9999999999998510510333
Q ss_pred -HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -1210122100123333210000023211111244000112221000001222102222000001244544356421112
Q gi|254780867|r 228 -WIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGH 306 (478)
Q Consensus 228 -Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q 306 (478)
|+||||++||+|+|+++|++++|+|+|+++|+.. ..+..+.+...+..+|.+|+++|+++|+.|+|+||++|||||+|
T Consensus 180 ~WLP~Ah~~aPs~vSal~Sg~m~k~gvyg~~r~~~-l~~~~~~~g~~~~~~G~~s~~~G~l~A~~q~D~KrlLAYSsi~n 258 (578)
T PRK06459 180 EWLPIAHGNAPSNASAVLSATMTLMGVYGILKMES-LSPVSPYLGIFLLAIGAFSILFGALYSYVSDHVKGLLAFSTIEN 258 (578)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11740117899579999999999999999999999-60353599999999999999999999998762899998834998
Q ss_pred CCCCCCCCCCH---------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 44211111121---------577888864300232010011000026787408764550210466523211478999986
Q gi|254780867|r 307 AGYALIGFSTG---------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFL 377 (478)
Q Consensus 307 ~G~i~~~l~~~---------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~ 377 (478)
+|+|++|+|.+ ..+..++++|.+||++.|..+|+..|++.+++++ |++++++|+ +..+++++.
T Consensus 259 iG~i~~~lGl~~~~~~~~l~~~~~~a~l~h~~nHa~fK~lLFl~aG~v~~~~~~--~~~~~~~gl------t~~~~lig~ 330 (578)
T PRK06459 259 NGAILVALGLYLELVSSDLREFVLFTVIIYSIAHSLAKTGLFLSSGYVEGEYLT--TARSFEYGL------SVLGAVLLA 330 (578)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC--CCHHHCCCH------HHHHHHHHH
T ss_conf 899999999999814505799999999999999999999999710638998625--525640678------999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCH---H-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 530366500006759999999996284---9-------999999999999999999999999649987786556733218
Q gi|254780867|r 378 FSLAGIPPFAGFFGKYFLLISAVKREF---Y-------VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRL 447 (478)
Q Consensus 378 lsl~GlPp~~GF~sK~~i~~~~~~~~~---~-------~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~ 447 (478)
+|++|+||++||+|||+++|+.+.... . ..+.+..++..++..++.|.+...|+++|+++.....+|.+.
T Consensus 331 ~sisglPP~nGFvseWli~qs~~~~~~~~~~~~~~~~~~~~~~lAlt~ala~~~~vk~~g~~fl~~pr~~~a~~a~e~p~ 410 (578)
T PRK06459 331 MSLSGLLPTIGGVATWMLLESLFMEAYTLPHFIGILPIIAGAMIAMGEGLATGSLIKYISYTQLFRPIKDHASKIKQGPI 410 (578)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCH
T ss_conf 99962998555889999999999705553138999999999999999999999999999710018899756774401558
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780867|r 448 FIFG 451 (478)
Q Consensus 448 ~~~~ 451 (478)
....
T Consensus 411 ~~~~ 414 (578)
T PRK06459 411 LAVG 414 (578)
T ss_pred HHHH
T ss_conf 9999
No 79
>MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=466.87 Aligned_cols=381 Identities=17% Similarity=0.205 Sum_probs=310.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 22100316764100799999999999999999999996321002242066799999999998731461022124577788
Q gi|254780867|r 61 YEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSF 140 (478)
Q Consensus 61 ~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i 140 (478)
.++..++..+..|..|..+..++...+..+..++.+|++++++. .||+.++.++..+|.+++.|+|+++++++||.+++
T Consensus 32 ~~~~~~s~~f~fd~~Sl~F~~~v~~Is~~V~~YS~~YM~~d~~~-~rF~~~l~lFi~SMl~LV~S~nll~l~lgWE~lGl 110 (527)
T MTH00095 32 VEWDFLSFKFNFYFNSLLFSLILLLVFFSVLVFSTYYMDGELNF-NYFYFVLLIFVGSMFLLIFSNSVFTMLLSWDLLGI 110 (527)
T ss_pred HHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 41034432200998789999999999999999989972799891-49999999999999999998029999999999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77776653200013445555540146204679988988530010000012222111013431000012222112344444
Q gi|254780867|r 141 ALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKM 220 (478)
Q Consensus 141 ~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~ 220 (478)
++|.||.+|++ +++.+||.|+++.+|+||.+++.++........+....+.. ......+++.|...|+
T Consensus 111 ~SylLI~fy~~-~~s~~aa~~t~l~nRiGD~~ll~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~i~a~tKS 178 (527)
T MTH00095 111 SSFFLVLFYNN-WNSCSGAMNTVLTNRLGDFFIFLFFSGFIFSSYYFLSFSFF-----------SSSMSLMLLLASFTKS 178 (527)
T ss_pred HHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHH
T ss_conf 99999820698-88999999999999999999999999999997899988899-----------9999999999999984
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321100012101221001233332100-0002321111124400011222100000122210222200000124454435
Q gi|254780867|r 221 ALVPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 221 ~~fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
||+|+|.||||||+ |||||||++|+. ++++|+|.++|..+...+ +.....+.++|.+|+++|++.|+.|+|+||++
T Consensus 179 AQfPfh~WLP~AM~-APTPVSALvHSsTlVtAGVyLliR~~~~~~~--~~~~~~ll~iG~lT~~~~~l~Al~q~DiKkil 255 (527)
T MTH00095 179 AQFPFSSWLPKAMA-APTPVSSLVHSSTLVTAGLYLLMNFSYPLMN--KNVLKIMLLIGLFTMFFSSLSALVEEDLKKVV 255 (527)
T ss_pred CCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20656232467617-9993679997789999899999999999823--89999999999999999999998476589999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 64211124421111112157788886430023201001100002678740876455021046652321147899998653
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFS 379 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~ls 379 (478)
||||++|+|+|+.++|.|... .+.+|.++|++.|+.+|+++|.+.+... ++||+|++||+.+++|.+..++.++.++
T Consensus 256 AySTlSQLG~M~~~lGlG~~~--la~fHL~~HA~FKalLFL~aG~iIh~~~-g~QDiR~mggl~~~~p~~~~~~~i~~ls 332 (527)
T MTH00095 256 ALSTLSQMGFSMLTFGSGLSF--LSFFHLLSHALFKSCLFMQVGYLIHCMF-GQQDGRNYSNLGNLPVFIQLQMLVTLFC 332 (527)
T ss_pred HHHHHHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 999898999999999856699--9999999999999999997789998369-9417898658665538999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 0366500006759999999996284999-999999999999999999999964998778655673321899999999999
Q gi|254780867|r 380 LAGIPPFAGFFGKYFLLISAVKREFYVL-AIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 380 l~GlPp~~GF~sK~~i~~~~~~~~~~~~-~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (478)
++|+||++||+||+.+++....++.... ..+..++..+|..|..|.++..|.++.+..... ++......+...+...
T Consensus 333 L~G~PflsGFySKD~ILe~~~~~~~~~~~~~l~~~s~~lT~~YS~Rl~~~~f~~~~~~~~~~--~~~~~~~~~~~~l~~~ 410 (527)
T MTH00095 333 LCGLFFTSGFVSKEFILELFFSNSFMIFFSFMFFFSVFLTFGYSYRLWKSFFLSFSKSVYNY--SSSVVMNFLSLLLVFF 410 (527)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC--CCHHHHHHHHHHHHHH
T ss_conf 85543532898899999999981189999999999999999999999999992667643000--2218999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780867|r 459 YFLI 462 (478)
Q Consensus 459 ~~~~ 462 (478)
...+
T Consensus 411 si~f 414 (527)
T MTH00095 411 SIFF 414 (527)
T ss_pred HHHH
T ss_conf 9999
No 80
>PRK12664 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=469.35 Aligned_cols=368 Identities=17% Similarity=0.226 Sum_probs=288.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+.....-+++..+............++. .+.++..++.+...++...++++++.|+|++++|+|||++++++++|
T Consensus 28 ~~~~~~~~~~~lv~~~~~~~~~~~~~l~~----~~~~~~~~~e~~~~LlY~gSaLGvV~AgDLitLfIFWElmaisS~~L 103 (530)
T PRK12664 28 YNIGLPVYNYDLVLFIVLSFILSLIFLYI----LPIKNLTFSEMLLYLLYYLSSIAAISSSSLLLVVISFEIMALSAVMI 103 (530)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 23325444432899999999999999999----98233028899999999999999999751999999999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65320001344555554014620467998898853001000001222211101343100001222211234444432110
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
|..+ +++++.+++.||.+++..|+..++.|....+...+..+ .+..++++|+++|+|+||+
T Consensus 104 I~~~-~t~~s~~Ag~rYl~vh~~gG~iLL~G~~~~~~~~~~~~------------------l~~lliliG~~iKaA~fPl 164 (530)
T PRK12664 104 IAAG-CNGGNMGAVIHYACVHFFSGVLLLVGASGQAVNGDYNG------------------YCKLFFLIGLLINCACFPA 164 (530)
T ss_pred HHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH------------------HHHHHHHHHHHHHHCCCCC
T ss_conf 8718-88246899999999999999999999999975254004------------------9999999999999578844
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00121012210012333321000002321111124400011222100000122210222200000124454435642111
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~ 305 (478)
|.|+||||++||+++++++|+.++|+|+|.+.|.+.. .+++.++|++|+++|+++|+.|+|+||++|||||+
T Consensus 165 H~WLPdAy~~A~~~~s~llSa~~tK~avY~L~R~f~g--------~~iLi~lG~it~v~G~i~Al~Q~DiKRlLAYSsVs 236 (530)
T PRK12664 165 SSWVVDAYPAASNNGIIVLSLFTTKVAAFVLLLFFQG--------EEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVG 236 (530)
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0101431679963678999999999999999999506--------47999999999999999999987499999999998
Q ss_pred CCCCCCCCCCC---H-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 24421111112---1-5778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 306 HAGYALIGFST---G-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 306 q~G~i~~~l~~---~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
|+|||++|+|. + ..+..++++|+++|++.|..+|+++|.+.+++|+ ||++|+||+.|+||+++.++.++.+|++
T Consensus 237 QiGymv~giG~~~ig~~~a~~~ai~H~~~H~l~KalLFm~aGaV~~~TGt--~~i~~LGGL~k~MP~Ta~~~lIgalSia 314 (530)
T PRK12664 237 QMGLLITAIGFSYSSSVSVIGIIILQIVLSVVYQTLLFMVADSVINRTRK--FNLNEVGGLFKKMSVEAICSIIAILNMG 314 (530)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999865112217689999999999999999999998799998087--1178855898761199999999999984
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHH-HHHHHHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf 66500006759999999996284999999--99999999999-999999996499877865--56733218999999999
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIV--ALLSSVISAYY-YLRVISIMWFDQSTECVV--VVAKEMRLFIFGSILFV 456 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~--~~~~s~~s~~y-~~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~ 456 (478)
|+|||+||+||.++..+.-+++..+.... ....++..... =+|+.+..|+++++++.+ +.+.++...+.....+|
T Consensus 315 G~Pp~sGFvSKsli~~a~~~~~~~~~~~~~l~~~a~~~~~~~~gik~~~f~f~~~~~~~~~~~~~p~~m~~aM~i~a~lc 394 (530)
T PRK12664 315 AFPGTAGFVSKSLITHSIDTTDLTNVLYKKLFLICSLLLFASVGLKFFWYAFISKSRSKPEANKVKQGSKLSMIILVLIC 394 (530)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68852207888999998775785699999999997689986158771356776167778887887562899999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999997676
Q gi|254780867|r 457 TGYFLIENIL 466 (478)
Q Consensus 457 ~~~~~~~~~~ 466 (478)
+..+++|+.+
T Consensus 395 i~~Gv~~~~l 404 (530)
T PRK12664 395 VVLGVFGSYL 404 (530)
T ss_pred HHCCCCCCCC
T ss_conf 6136474124
No 81
>TIGR00944 2a6301s04 Multicomponent K+:H+antiporter; InterPro: IPR004775 A group of uncharacterised proteins some of which are similar to various chains of the NADH-ubiquinone/plastoquinone (complex I).; GO: 0015386 potassium:hydrogen antiporter activity, 0006812 cation transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=449.23 Aligned_cols=444 Identities=19% Similarity=0.356 Sum_probs=370.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH--HHHHHHHHHCC-----C----------CHHHHHHHHHHH
Q ss_conf 999999999999999998640230158999999999999--99999997132-----2----------100316764100
Q gi|254780867|r 12 LCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLS--IALFFLLIMPY-----E----------GIGLGGAYISDR 74 (478)
Q Consensus 12 lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~--i~l~~~~~~~~-----~----------~~~~~~~~~~D~ 74 (478)
+++|.++|+..++.+...+++. +...+........+. ++.......-. + .-+++..+..|+
T Consensus 3 liL~iliP~~~AilLifi~krd--~~lkr~~~~a~tl~~~v~s~Il~~~v~~GtGsl~G~~~~~LG~WkAPygIVlvlD~ 80 (504)
T TIGR00944 3 LILAILIPVLVAILLIFINKRD--RILKRIIALASTLVVLVLSIILLRLVVAGTGSLKGSGVLELGNWKAPYGIVLVLDR 80 (504)
T ss_pred CHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 0388899999998862167750--68888998889999999999999998413676577525524871061799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 79999999999999999999999632100224206679999999999873146102212457778877776653200013
Q gi|254780867|r 75 FSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVF 154 (478)
Q Consensus 75 ~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~ 154 (478)
+|..+.....+.++.+-+|++..+..+++| ..||...++..+|..|.+.++|++|+|||+|++..+||.|+ .+++.|-
T Consensus 81 fsaLl~~~t~ii~l~v~lYS~~~~g~~rER-~~yys~vqfllaG~~GAFlTGDlFNlfVFFE~~L~aSY~Ll-v~Gstki 158 (504)
T TIGR00944 81 FSALLVLTTSIIALLVQLYSYARVGTKRER-YYYYSLVQFLLAGVNGAFLTGDLFNLFVFFELLLIASYGLL-VLGSTKI 158 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCE
T ss_conf 999999999999999998625652225550-57899999999987557785479999999999999999999-9769720
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 445555540146204679988988530010000012222111013--431000012222112344444321100012101
Q gi|254780867|r 155 SIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG--HRSFVLIVGVVLILVGLFFKMALVPFHMWIPDV 232 (478)
Q Consensus 155 ~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a 232 (478)
+.++++||...|.++|.++++|+.++|..+||+|+.|++..+.+. .++.......+++...|.+|.|.||+.+|||.+
T Consensus 159 ~l~e~lkYi~vN~vsSalFviGV~~lY~v~GTLNmADls~Kla~Le~~~~gLv~~~~~ll~~vF~~KaG~fPl~fWLP~a 238 (504)
T TIGR00944 159 QLKEGLKYIVVNVVSSALFVIGVSLLYAVAGTLNMADLSTKLAALEARSRGLVEVVSVLLLLVFLVKAGVFPLYFWLPTA 238 (504)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCC
T ss_conf 22102034457789999999999999999877569999999852688876235789999999998733756300003200
Q ss_pred HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC----C-CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 221001233332100000232111112440001122----2-10000012221022220000012445443564211124
Q gi|254780867|r 233 YEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS----G-LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307 (478)
Q Consensus 233 ~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~----~-~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~ 307 (478)
|..+|.|++|++.++.+|+|+|.+.|...+.+.+.. . -++++.+.|.+|+++|.+.++...|+||+..||-+--.
T Consensus 239 YyApp~pi~a~FGAlLTKVG~YaI~R~~~L~F~~~~Gass~F~~~~~~~la~LTiiFG~iG~lAy~n~~ki~~Ynv~~av 318 (504)
T TIGR00944 239 YYAPPAPIAALFGALLTKVGIYAIIRLFLLVFGDDAGASSAFGHELLVFLALLTIIFGGIGVLAYANVKKIVLYNVLVAV 318 (504)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11142469998768998899999999999986321045431379999999999999867999999987699999999998
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCC----CCCHHHCCCCCC-------------CCHH
Q ss_conf 42111111215-77888864300232010011000026787408764----550210466523-------------2114
Q gi|254780867|r 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNI----QNISDLAGLSRQ-------------DIFL 369 (478)
Q Consensus 308 G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~----~~i~~l~gl~~~-------------~P~~ 369 (478)
|-++.|.++++ .+++|+++|.+...+.|.++|+.++.+++.+++.. -+++++||+.|| +|++
T Consensus 319 GviL~gVa~~t~~~~~GAiyYl~~d~L~~gAlFlLig~~i~~~gtGadvlaa~l~~~GglikreeeeevGaaiPGtypVL 398 (504)
T TIGR00944 319 GVILVGVALGTDASLAGAIYYLVHDMLVKGALFLLIGLLIRLTGTGADVLAATLEKYGGLIKREEEEEVGAAIPGTYPVL 398 (504)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
T ss_conf 89997664057147899999999999999999999999997306763788887998389643211101245577510378
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 789999865303665000067599999999962-----------849999999999999999999999999649987-78
Q gi|254780867|r 370 TCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR-----------EFYVLAIVALLSSVISAYYYLRVISIMWFDQST-EC 437 (478)
Q Consensus 370 ~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~-----------~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~-~~ 437 (478)
+++|.+++++++|+||++||++|+.+.++.++. +.|...++.+++|....+...|+.-..||+++| +.
T Consensus 399 Gw~Ffi~AlsLAGiPPLSGF~gKF~i~~g~F~~Paaelatamsag~~t~~~l~lLSsL~vlysv~RIfi~~Fwg~~kG~~ 478 (504)
T TIGR00944 399 GWSFFIAALSLAGIPPLSGFIGKFAIVEGLFDRPAAELATAMSAGDYTIVVLVLLSSLVVLYSVLRIFIRTFWGEEKGEI 478 (504)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999985577740257788887504445417899988642689999999999999999999998764126757888
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6556733218999999999999
Q gi|254780867|r 438 VVVVAKEMRLFIFGSILFVTGY 459 (478)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~ 459 (478)
++.++.+.+-...+..+++...
T Consensus 479 p~~~~~~~k~l~~~a~~~~~ls 500 (504)
T TIGR00944 479 PRVNKIEVKPLVVLAAVAILLS 500 (504)
T ss_pred CCCCEEEEEHHHHHHHHHHHHH
T ss_conf 9853366402799999999999
No 82
>TIGR01960 ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 family; InterPro: IPR010217 This family represents NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighbouring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=441.81 Aligned_cols=457 Identities=17% Similarity=0.221 Sum_probs=378.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-----H--HHCCCCHH--------HHHH
Q ss_conf 7786299999999999999999998640230158999999999999999999-----9--71322100--------3167
Q gi|254780867|r 5 SFINDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL-----L--IMPYEGIG--------LGGA 69 (478)
Q Consensus 5 ~~~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~-----~--~~~~~~~~--------~~~~ 69 (478)
++.-+-.+++|..-+..+.+.++......||-=-+.....+.+...++.... . ..+.+... ++..
T Consensus 3 ~fL~~t~W~vP~Y~L~G~~L~lPWs~G~~R~TGPRPAaY~N~lmT~vaf~Hsl~~l~~iw~~p~~~l~~~WL~~AdL~L~ 82 (613)
T TIGR01960 3 QFLLETSWLVPFYALIGALLALPWSPGIVRKTGPRPAAYFNLLMTFVAFVHSLLALQAIWSQPPEELVFTWLQAADLDLS 82 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 34788988988899999999844443840268898478999999999999999999997279954486332057999854
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 641007999999999999999999999963210022-4206679999999999873146102212457778877776653
Q gi|254780867|r 70 YISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSC-FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM 148 (478)
Q Consensus 70 ~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~-~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~ 148 (478)
+.+.--+.....+..++++-.....|...|+||+.. .|||.++-++++|+.+++.+||++.-|+-+|+.++++|+||++
T Consensus 83 ~~leIS~v~~gAl~liTGLnllAQIfAlGYmEkDWglARFf~LLglFEAaL~glvl~dSLFlSYvlLEiLTLsTYLLvGf 162 (613)
T TIGR01960 83 FALEISSVSTGALVLITGLNLLAQIFALGYMEKDWGLARFFALLGLFEAALSGLVLSDSLFLSYVLLEILTLSTYLLVGF 162 (613)
T ss_pred CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20121116799999999999999998754343332479999999999999999999987888899999999889999888
Q ss_pred HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH--HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20001344555554014620467998898853001000001222211--1013431000012222112344444321100
Q gi|254780867|r 149 NRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATS--LFIGHRSFVLIVGVVLILVGLFFKMALVPFH 226 (478)
Q Consensus 149 ~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~--~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH 226 (478)
|.+++--++||+..|...|+||.++|+|++-++...||+||+|+.+= ..+.++. ..++-+.-+++|-.-||||||+|
T Consensus 163 WfaQPLVVtaARDAFLTKRVGDl~LLMGVvaL~pLAGs~ny~~L~~WA~tA~l~~~-~~TLlgLaLIAGP~GKCAQFPLH 241 (613)
T TIGR01960 163 WFAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGSWNYDDLAEWAATANLDPT-TATLLGLALIAGPTGKCAQFPLH 241 (613)
T ss_pred HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCH-HHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 87023033144211023478899999899998421467882779999820589826-88888899974013222468754
Q ss_pred HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01210122100123333210000023211111244000112221000001222102222000001244544356421112
Q gi|254780867|r 227 MWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGH 306 (478)
Q Consensus 227 ~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q 306 (478)
.||.||||+ |.|.|.+-.++.+-+|-|+++|..+.+ ..+|.-...++++|.+|++-+++.|+.|.|+||-|.||+-+.
T Consensus 242 LWLDEAMEG-P~PAsIlRNsvVVA~GAyvLiKLQPvL-~LSPvA~~~li~IG~VTAig~SLiaIAQiDIKR~LSysvSaY 319 (613)
T TIGR01960 242 LWLDEAMEG-PNPASILRNSVVVAAGAYVLIKLQPVL-TLSPVALTVLIAIGSVTAIGASLIAIAQIDIKRALSYSVSAY 319 (613)
T ss_pred CHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 100021478-884267877898886442210021054-211589999989855788878899999987988998999987
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 44211111121577888864300232010011000026787408764550210466523211478999986530366500
Q gi|254780867|r 307 AGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPF 386 (478)
Q Consensus 307 ~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~ 386 (478)
||++.+|.|.+..+ .++.-..+|+++|..+|+++|.+.-. +++||++|+|||++|||+++.+|++|.+++.|+||+
T Consensus 320 mGLVFIAVG~~q~~--~Al~lllTha~A~AlL~MS~GsiI~n--~~tQDlT~lGGLWsRrPisg~sFvVGsagLia~~PL 395 (613)
T TIGR01960 320 MGLVFIAVGLGQGE--LALLLLLTHAIAKALLFMSIGSIIFN--TVTQDLTELGGLWSRRPISGLSFVVGSAGLIALPPL 395 (613)
T ss_pred HHHHHHEECCCCCC--HHHHHHHHHHHHHHHHHHHCCCEEEC--CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 63656211378864--35788899999999985105756551--776221313887466613344699996799874531
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00675999999999628499999999999999999999999996499877865567332189999999999999997676
Q gi|254780867|r 387 AGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENIL 466 (478)
Q Consensus 387 ~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
.+||+-.-..+..+.. .||+..+.++-+.+|++-..|.++-+|.||+|.+.++.||....+..++.....+....|-.+
T Consensus 396 G~FWa~~~l~d~~~~~-~PwlvGvll~VN~ltA~nLtR~F~LvF~G~akpkT~RsPEV~Wpm~lPMv~l~il~LllPl~l 474 (613)
T TIGR01960 396 GSFWAWLKLADGLWAT-SPWLVGVLLLVNLLTAFNLTRVFRLVFGGKAKPKTRRSPEVLWPMALPMVVLIILVLLLPLIL 474 (613)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 2589999986245544-159999999999998765420024454178888745687877631453399999999999999
Q ss_pred HHH
Q ss_conf 589
Q gi|254780867|r 467 NSS 469 (478)
Q Consensus 467 ~~~ 469 (478)
...
T Consensus 475 ~~~ 477 (613)
T TIGR01960 475 QQW 477 (613)
T ss_pred HHH
T ss_conf 987
No 83
>pfam00361 Oxidored_q1 NADH-Ubiquinone/plastoquinone (complex I), various chains. This family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Probab=100.00 E-value=0 Score=452.89 Aligned_cols=268 Identities=34% Similarity=0.566 Sum_probs=246.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 14610221245777887777665320001344555554014620467998898853001000001222211101343100
Q gi|254780867|r 125 ANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFV 204 (478)
Q Consensus 125 s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~ 204 (478)
|||++++|++||++++++|.||+.|++|+++.||++||++++.+|+.++++|+..+|..+|++|++++..... +...
T Consensus 1 s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~~Aa~ky~i~~~~~s~~lL~gi~~ly~~~gt~~~~~~~~~~~---~~~~ 77 (270)
T pfam00361 1 SNNLLLFYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYIYGLTGSLSFTLLFLFGL---NSNG 77 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC---CCHH
T ss_conf 9749999999999999999998834999999999999999999999999999999999862226999986435---6348
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
Q ss_conf 00122221123444443211000121012210012333321000002321111124400011222100000122210222
Q gi|254780867|r 205 LIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVL 284 (478)
Q Consensus 205 ~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~ 284 (478)
...+..++++|+++|+|++|||.|+||+|+++|+++++++++++||+|.|+++|+...... .+.+..++.++|++|+++
T Consensus 78 ~~~~~~l~~~g~~~K~~~~PfH~Wlpday~~ap~~~s~~ls~v~~~~g~~~l~r~~~~~~~-~~~~~~~l~~~~~~s~i~ 156 (270)
T pfam00361 78 LLLLSLLLLVAFLVKSPQFPFHFWLPDAHEGPPPVSSLILATTLKKAGLYLLLRLSNLFSS-SNLISYILLILGILSMLL 156 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999486247557788579987899999989999999999999986132-378999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCC
Q ss_conf 200000124454435642111244211111121-5778888643002320100110000267874087645502104665
Q gi|254780867|r 285 GSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLS 363 (478)
Q Consensus 285 g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~ 363 (478)
|++.|++|+|+||++|||||+|+||++++++.+ ..+..++++|+++|++.|.++|.+++.++++++ +||++|++|+.
T Consensus 157 g~~~Al~Q~dlKrllAYSSis~~G~il~~~~~~~~~~~~~~~~~~i~h~~~k~~lF~~~g~i~~~~~--~~~i~~l~Gl~ 234 (270)
T pfam00361 157 GSLGALNQTDLKKLIAYSSISHMGFVMMGILSLGSYGIIGAIIHLISHGFFSALLFLLAGLIIHRSG--TRDLRNYGGLF 234 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHCCHH
T ss_conf 9999983302779999999999999999999865779999999999999999999999999998758--87099870969
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 23211478999986530366500006759999999
Q gi|254780867|r 364 RQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLIS 398 (478)
Q Consensus 364 ~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~ 398 (478)
|++|.++..+.++.++++|+||++||++||+++++
T Consensus 235 ~~~P~~~~~~~i~~lsl~GiPp~~GF~~K~~i~~s 269 (270)
T pfam00361 235 NSMPILALLLLLLLLSLMGLPPLLGFISKFLILES 269 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88299999999999999877576038899999864
No 84
>MTH00200 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=437.92 Aligned_cols=307 Identities=30% Similarity=0.532 Sum_probs=268.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 42066799999999998731461022124577788777766532000134455555401462046799889885300100
Q gi|254780867|r 106 FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG 185 (478)
Q Consensus 106 ~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g 185 (478)
..+-.+++....|+++.+.|+|++++|++||++++++|.++.. ++++++.||+.||+++|.+|+.++++|+...|..+|
T Consensus 4 ~~~~il~l~~~~g~~~~~~s~~l~~l~v~lEl~sl~~~~Li~~-~~~~~s~eaa~KYfi~~~~~S~l~L~g~~~~~~~~g 82 (343)
T MTH00200 4 YISPLLILSMVLGTLLILSSSHWFFIWLGLEINTLAFIPLLAW-QHHPRAVEATVKYFIIQAVASALLLFGGLLNAWSSG 82 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999999999999999989999999999999999999984-998579999999999999999999999999999985
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 00012222111013431000012222112344444321100012101221001233332100000232111112440001
Q gi|254780867|r 186 CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP 265 (478)
Q Consensus 186 s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~ 265 (478)
++|+++..... +..++..|+++|+|++|||.|+||+|+++|+++++++++.+|+++.+.+.|+....
T Consensus 83 ~~~~~~~~~~l-----------~~~lil~gl~~K~g~fPfH~Wlpdvy~~~~~~~~~lls~~~Ki~~~~~l~~~~~~~-- 149 (343)
T MTH00200 83 EWGISELLGPL-----------SETLILLAIALKLGLAPGHFWVPDVLQGLNLITGLILSTWQKLAPLALLTQLASEL-- 149 (343)
T ss_pred CHHHHHHHHHH-----------HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_conf 53367898899-----------99999999999974002487873174369889999999999999999999987320--
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHH
Q ss_conf 12221000001222102222000001244544356421112442111111215778888643002320100110000267
Q gi|254780867|r 266 MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSL 345 (478)
Q Consensus 266 ~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~ 345 (478)
....+.++|++|+++|++.|++|+|+||++|||||+|+||++++++.++. ....|...|.+.+..+|.+.+.
T Consensus 150 ----~~~~l~~l~~lS~i~G~l~al~Q~~iKrllAYSSI~~~G~il~~l~~~~~---~~~~~~~~y~~~~~~l~~~~~~- 221 (343)
T MTH00200 150 ----NSNILLLLGVLSALVGGWGGLNQTQLRKLLAFSSIAHLGWLLSGIVYGGL---LGLLYFLLYVILTLSLFLLLHT- 221 (343)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-
T ss_conf ----15899999999999999999852020257865379889999999998189---9999999999999999999999-
Q ss_pred HHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87408764550210466523211478999986530366500006759999999996284999999999999999999999
Q gi|254780867|r 346 RRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRV 425 (478)
Q Consensus 346 ~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~ 425 (478)
++.+|+++++|+.+++|.++.++.++.+|++|+||++||++||.+++++++++.++++.+.+++|+++++||+|+
T Consensus 222 -----~~~~~i~~l~gl~~~~p~~a~~~~i~~LSL~GiPP~~GF~~K~~i~~~~~~~~~~~l~~i~li~S~is~~yYlRi 296 (343)
T MTH00200 222 -----LNSTKINSLSFSLGKSPLLSMLLLLTLLSLGGLPPFTGFFLKWLILQELGKQNLVIVATLLLLGSLLSLFYYLRL 296 (343)
T ss_pred -----HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----668719877172101299999999999998402245359999999999998273999999999999999999999
Q ss_pred HHHHHCCCCCCCCC
Q ss_conf 99996499877865
Q gi|254780867|r 426 ISIMWFDQSTECVV 439 (478)
Q Consensus 426 ~~~~f~~~~~~~~~ 439 (478)
.+.++++.|+++..
T Consensus 297 ~~~~~~~~~~~~~~ 310 (343)
T MTH00200 297 SYVSLLTLSPQQIM 310 (343)
T ss_pred HHHHHHCCCCCCCC
T ss_conf 99999808999965
No 85
>MTH00198 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=442.26 Aligned_cols=377 Identities=32% Similarity=0.600 Sum_probs=307.0
Q ss_pred HHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC------CHHHH--HH
Q ss_conf 999999999963210022-4206679999999999873146102212457778877776653200------01344--55
Q gi|254780867|r 88 IIIFIKMFSCIYVKPFSC-FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRK------SVFSI--EA 158 (478)
Q Consensus 88 l~~~~~~~~~~~~~~~~~-~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~------~~~~~--~a 158 (478)
.++.+..++....++++. +.-.++.+....|-+.++.|.||++.|+..|+.+++.+.|.+-.++ +..+. ||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~lvliv~l~~lllv~s~nwlsiyla~elqtl~lfil~a~~~~~~~~~~~~~~~~~EA 233 (596)
T MTH00198 154 CVILLSLMGLLFLTNERGPGSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGESSEPRRLPSGASNTPPES 233 (596)
T ss_pred HHHHHHHHHHHHEECCCCCCCCEEHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99999998888500676888761000788642424200101899999999888899998750356554566557898552
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH--HHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 555401462046799889885300100000122221--110134310-00012222112344444321100012101221
Q gi|254780867|r 159 ALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT--SLFIGHRSF-VLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 159 a~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~--~~~~~~~~~-~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
++|||+++.++|.+++.|+.++|..||+.|+.+... ...+.+... ...++.+++.+|+++|.+..|||.|.||+||+
T Consensus 234 GLKYFVLGAlSSGllLyGcSLiYGfTGst~~~~~i~s~~~~~~~~~l~~~~~G~vFI~vgLlFKlSAaPFHMWaPDVYEG 313 (596)
T MTH00198 234 GLKYWILGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEG 313 (596)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 02667575777758998799840277763116678763114444221111166999999999886137522668744489
Q ss_pred HCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00123333210000023211111244000112221000001222102222000001244544356421112442111111
Q gi|254780867|r 236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFS 315 (478)
Q Consensus 236 ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~ 315 (478)
+|||++++++.++|.+....+.|+... +.++...++.|++.|++.|+.|+|+||++|||||+|+||+++|++
T Consensus 314 aPT~VTaffA~vPKiA~f~~l~rl~~~--------~~ill~~sIlSmiiGai~Ai~QtnIKRLLAYSSIgHmGfiL~Gla 385 (596)
T MTH00198 314 APTPTTALIAIIPKFTVYILLTSLVIT--------SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVS 385 (596)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 867899999987999999999999988--------999999999999999999987887889998721547899999987
Q ss_pred CHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHH-------------------HCCCCCCCCHHHCCCCCCCCHHHHHHHH
Q ss_conf 215-77888864300232010011000026787-------------------4087645502104665232114789999
Q gi|254780867|r 316 TGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRR-------------------KDGNNIQNISDLAGLSRQDIFLTCALTI 375 (478)
Q Consensus 316 ~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~-------------------~~~~~~~~i~~l~gl~~~~P~~~~~~~i 375 (478)
.++ +++++.+.|++.|.++..+.|.++..+++ +.+++.++++|++|+.|++|..+.++.+
T Consensus 386 ~Gt~EGIqasliYliIYiiM~Lg~FaiILsL~~~g~~~~~~r~~~~g~~~~~~n~~~ie~IsDLsGLsk~nPiLA~sLaI 465 (596)
T MTH00198 386 AGTYESLQASWTYAVTYLVSALASFTVICTLEEFGTRATTSRKDKQGAFGSPGNYNLVRRLVDLTILSRGQPYIAFSLAI 465 (596)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 25466699999999999999989999999887404433332333210010123542000179765244129199999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----------
Q ss_conf 8653036650000675999999999628-------4999999999999999999999999964998778-----------
Q gi|254780867|r 376 FLFSLAGIPPFAGFFGKYFLLISAVKRE-------FYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC----------- 437 (478)
Q Consensus 376 ~~lsl~GlPp~~GF~sK~~i~~~~~~~~-------~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~----------- 437 (478)
..+|++|+||+.||++||+++.++++.+ ++++++++.+.|+++.+||+|+++.+|++-+++.
T Consensus 466 ~LFSLAGIPPLAGFfaKfYIL~aaIk~~~s~~l~~yYllaiiaVl~SVIs~fYYlRIVKImYFd~~~pl~~~~~~~s~il 545 (596)
T MTH00198 466 VFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVATIYFNFTRPLIKTKTPLSFIL 545 (596)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 99974689713678999999999975311344330689999999988763101363666878626775333456414667
Q ss_pred -----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----------65567332189999999999999997676589999
Q gi|254780867|r 438 -----------VVVVAKEMRLFIFGSILFVTGYFLIENILNSSIMK 472 (478)
Q Consensus 438 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (478)
.++....+.+.+.....++.++.++|+++....-+
T Consensus 546 ~W~~il~~~~~~~~~~~~ksilig~t~~~IlFl~i~P~~Ll~ith~ 591 (596)
T MTH00198 546 TWESILKGGTSEAEPGGGKSILISIYMYFILFLIICPQPLLLISYE 591 (596)
T ss_pred HHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHCCC
T ss_conf 6898852565200157663342115789999999768799985022
No 86
>MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=434.32 Aligned_cols=303 Identities=26% Similarity=0.428 Sum_probs=263.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 06679999999999873146102212457778877776653200013445555540146204679988988530010000
Q gi|254780867|r 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCT 187 (478)
Q Consensus 108 f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~ 187 (478)
...+......|++.++.|+|++.+|+++|+.+++.|.+++ +++++++.||+.||++.|.+|+.++++|+.+.|..+|++
T Consensus 5 ~ll~~~~lilG~~~~~sS~~~~~~wvglEl~~ls~~~Li~-~~~~~~s~Ea~~KYFl~~~~~S~~~L~g~~l~y~~tg~~ 83 (345)
T MTH00112 5 KLIITTSLILGTLITISSNHWLLAWTGLEINTLAIIPLIS-KSHHPRAIEAATKYFLTQAAASALILFSSTTNAWNTGQW 83 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999998999999999999999999998-699951899999999999999999999999999998380
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 01222211101343100001222211234444432110001210122100123333210000023211111244000112
Q gi|254780867|r 188 GFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPML 267 (478)
Q Consensus 188 ~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~ 267 (478)
|+.+..... ...++..|+++|.|++|||.|+||+||++|++.++++++++|.++...+.+......
T Consensus 84 ~i~~~~~~~-----------~~~li~~~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~lst~~Kia~~~il~~~~~~~~--- 149 (345)
T MTH00112 84 DITQLTNPT-----------SCTILTLALAMKLGLAPFHFWLPEVLQGSTTTTALILLTWQKLAPLTLLLMTSNSLN--- 149 (345)
T ss_pred HHHHHCCHH-----------HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC---
T ss_conf 676521268-----------999999999999813424410999985796889999999999999999999822210---
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHH
Q ss_conf 22100000122210222200000124454435642111244211111121577888864300232010011000026787
Q gi|254780867|r 268 SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRR 347 (478)
Q Consensus 268 ~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~ 347 (478)
..++.+++++|+++|++.|++|+|+||++|||||+|+||++.++..++. ....|...|.+.+.+.|......
T Consensus 150 ---~~il~~~~~lS~~vG~~~al~Q~~iKrlLAYSSIsh~G~ml~~l~~~~~---~~~~~~~~Y~i~~~~~f~~~~~~-- 221 (345)
T MTH00112 150 ---TTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYAPK---LTLLTFYLYIIMTTTMFLTLNTT-- 221 (345)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf ---4999999999999999999842008999999999999999999998699---99999999999999999999997--
Q ss_pred HCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 40876455021046652321147899998653036650000675999999999628499999999999999999999999
Q gi|254780867|r 348 KDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVIS 427 (478)
Q Consensus 348 ~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~ 427 (478)
+.++++|++|+.|++|.++.++.++.+|++|+||+.||++||++++++++++.++++++.+++|+++++||+|+.+
T Consensus 222 ----~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~i~~~~i~~~~~~l~~i~il~S~isl~yYlRi~y 297 (345)
T MTH00112 222 ----STKTIKDMGTSWTKSPMLNATLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATTMAMLSLLSLFFYLRLAY 297 (345)
T ss_pred ----CCCCHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----6775998728241009999999999987265652115889999999999848499999999999999999999999
Q ss_pred HHHCCCCCCC
Q ss_conf 9964998778
Q gi|254780867|r 428 IMWFDQSTEC 437 (478)
Q Consensus 428 ~~f~~~~~~~ 437 (478)
.+++.+|+++
T Consensus 298 ~~~~~~~~~~ 307 (345)
T MTH00112 298 YSTITLPPNT 307 (345)
T ss_pred HHHHHCCCCC
T ss_conf 9998679999
No 87
>MTH00096 consensus
Probab=100.00 E-value=0 Score=427.36 Aligned_cols=343 Identities=17% Similarity=0.222 Sum_probs=291.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 10031676410079999999999999999999999632100224206679999999999873146102212457778877
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
+.+.+..+..|..|..+...+..++..+..++..|++ + ++.||+.+..++..+|..++.|+|+++++++||.+++++
T Consensus 18 n~~~n~sf~~D~~Sl~F~~~v~~Is~~V~~yS~~YM~--~-~~~~F~~~l~lF~~sMl~LV~s~Nl~~lfigWEglGl~S 94 (476)
T MTH00096 18 NQFSNLSFLFSLLSLIFLISLWNIFSNILKFSKIYMK--L-SSTYFKILMWMFCLSMITLIVSNSWLTLFLGWEFLGITS 94 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2466468879965999999999999999999999862--5-430799999999999999999805999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
|.||++|+++ ++.+++.|+++.+|+||..++.|+...+...++.++. .++++|...|+||
T Consensus 95 ylLI~f~~~~-~s~~aa~~a~l~nRiGD~~lll~~~~~~~~~~s~~~~-------------------~ll~i~a~tKSAQ 154 (476)
T MTH00096 95 YFLILYYYNW-NSLSGSKLTFMSNRIGDMFIMLSFFLFSSIKKSFYMI-------------------LMILMLGMTKSAQ 154 (476)
T ss_pred HHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHCCC
T ss_conf 9988371988-9999999999999999999999999999985379999-------------------9999999753231
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1100012101221001233332100-000232111112440001122210000012221022220000012445443564
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAY 301 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAy 301 (478)
+|||.|||||+| |||||||++|+. +++||+|.++|..+...+ ......+.++|.+|+++|+..|+.|+|+||++||
T Consensus 155 ~Pfh~WLP~AM~-aPTPVSALvHSsTmVtAGVyLliR~~~~~~~--~~~~~~~l~iG~lT~l~a~~~Al~q~DiKKiIAy 231 (476)
T MTH00096 155 FPFSGWLPAAMA-APTPVSALVHSSTLVTAGIYIFFKFKLPLMN--LGFKKIMLLLFLLTMMMGSLSALLEKDLKKIIAF 231 (476)
T ss_pred CCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 742664588837-9981699998889999999999998698732--8999999999999999999999859888899999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 21112442111111215778888643002320100110000267874087645502104665232114789999865303
Q gi|254780867|r 302 SSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA 381 (478)
Q Consensus 302 Ssi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~ 381 (478)
||++|+|+|..++|.|.. ..+.+|..+|++.|+.+|.++|.+.+..+ ++||+|++||+.+..|.+ ++.++.+++.
T Consensus 232 STlSQLG~Mm~~~glg~~--~la~fHL~tHA~FKAlLFL~aG~vIH~~~-~~Qd~R~mg~l~~~~~~t--~~~i~~lsL~ 306 (476)
T MTH00096 232 STLSQLGLIMLSFYSLWL--GLMMFHLLVHAFFKSFFFIIFGMMIWSMY-SQQLNKNTSSFKMLSIMT--MFYISFLNMM 306 (476)
T ss_pred HHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHCCCCHHHHHH--HHHHHHHHHH
T ss_conf 888899999999980609--99999999999999999996789997278-455687633731067999--9999999981
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 66500006759999999996284999999999999999999999999964998778
Q gi|254780867|r 382 GIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC 437 (478)
Q Consensus 382 GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~ 437 (478)
|+|.++||+||+.+++....++. +.-++..+...+|+.|..|+++....++..-.
T Consensus 307 G~PFlsGFySKD~Ile~~~~~~~-~~~~~~~~~~~lT~~Ys~RL~y~~~~~~~~~~ 361 (476)
T MTH00096 307 SFFFTSGFLSKEILISLSMFKKI-FFFIVYIFILIFTLLYMKRLYFIFLLKKFFLL 361 (476)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66051016568999999999739-99999999999999999999999998211065
No 88
>MTH00041 ND2 NADH dehydrogenase subunit 2; Validated
Probab=100.00 E-value=0 Score=431.51 Aligned_cols=303 Identities=26% Similarity=0.456 Sum_probs=268.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 42066799999999998731461022124577788777766532000134455555401462046799889885300100
Q gi|254780867|r 106 FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG 185 (478)
Q Consensus 106 ~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g 185 (478)
.+++.++.....|+++++.|+|++.+|+++|+.+++.|.++..+ +++|+.||+.||+++|.+|+.++++|+.+.|..+|
T Consensus 2 ~~~~~ll~~~~~G~~~~~sS~~~~~~wvglEi~sls~~~Li~~~-~~~~s~EAa~KYFl~qa~aS~llL~g~~l~~~~~g 80 (350)
T MTH00041 2 NVLLFLITNVILGTIIVVSSHHWFLIWVGLELNTLSIIPILCSN-FTPRNVEATIKYFLVQAFSAAILLNGALIQAWLSG 80 (350)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999818-99428999999999999999999999999999986
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 00012222111013431000012222112344444321100012101221001233332100000232111112440001
Q gi|254780867|r 186 CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP 265 (478)
Q Consensus 186 s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~ 265 (478)
+++..+.... .+..++..|+++|+|++|||.|+||+||++|++++.++++.+|+++.+.+.|+....
T Consensus 81 s~~i~~~~~~-----------~~~~li~~al~~Klgl~PfH~W~Pdv~~g~~~~~~~~lst~~Kiap~~ll~~~~~~~-- 147 (350)
T MTH00041 81 SWSINGPLNS-----------LSSIIITIALGLKLGLFPCHFWFPDVIQGLNFLQGLILSTWQKIAPLIILIYIINNL-- 147 (350)
T ss_pred HHHHHHHHHH-----------HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_conf 2376547779-----------999999999998538415988887685667289999999999999999999996000--
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHH
Q ss_conf 12221000001222102222000001244544356421112442111111215778888643002320100110000267
Q gi|254780867|r 266 MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSL 345 (478)
Q Consensus 266 ~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~ 345 (478)
...++.++|++|+++|++.|++|+|+||++|||||+|+||++++++.+. .....|...|.+.+..+|.....
T Consensus 148 ----~~~il~~l~~lS~liG~~~al~Q~~lkrlLAYSSIsh~G~ml~~~~~~~---~~~~~~~~~Y~~~~~~lf~~~~~- 219 (350)
T MTH00041 148 ----NSNILITLGILSVLIGGWGGLNQTQTRKILAFSSIAHMGWIIITSAYSL---NAGIIMFLIYIIINTSIFLIFNE- 219 (350)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf ----1889999999879999999998877879999989989999999999869---99999999999999999999988-
Q ss_pred HHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87408764550210466523211478999986530366500006759999999996284999999999999999999999
Q gi|254780867|r 346 RRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRV 425 (478)
Q Consensus 346 ~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~ 425 (478)
.+.+++++++|+.+++|..+.++.++.+|++|+||+.||++||++++++++++.++++++.+++|+++.+||+|+
T Consensus 220 -----~~~~~i~~l~gl~~~~p~~~~~~~i~lLSLaGlPPl~GF~~K~lil~~li~~~~~~la~i~il~Slisl~yYLRl 294 (350)
T MTH00041 220 -----FNISTLSHLNRLSYLNPISAATLILVILSLGGLPPLTGFLNKFISLNCLIQNNSILLSIILIIGSLLSLFFYLRI 294 (350)
T ss_pred -----HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----310609999849998699999999999998705157669999999999998083999999999999999999999
Q ss_pred HHHHHCCCCC
Q ss_conf 9999649987
Q gi|254780867|r 426 ISIMWFDQST 435 (478)
Q Consensus 426 ~~~~f~~~~~ 435 (478)
.+......+.
T Consensus 295 ~y~~~l~~~p 304 (350)
T MTH00041 295 SFNSSLILFP 304 (350)
T ss_pred HHHHHHHCCC
T ss_conf 9999986899
No 89
>MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=424.53 Aligned_cols=305 Identities=28% Similarity=0.498 Sum_probs=266.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 42066799999999998731461022124577788777766532000134455555401462046799889885300100
Q gi|254780867|r 106 FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG 185 (478)
Q Consensus 106 ~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g 185 (478)
..++.++.....|++..+.|+|++..|+++|+.+++.+.++..+ +++++.||+.||++.|.+++.++++|+...|..+|
T Consensus 4 ~~l~l~l~~l~lg~~l~~sS~~w~~~wvglEi~~l~~~~Li~~~-~~~~s~Eaa~KYfliq~~~S~~~L~g~~~~~~~~g 82 (346)
T MTH00070 4 YALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKT-HHPRATEAATKYFLTQAAASALILFSSTINAWFTG 82 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999758-99948999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 00012222111013431000012222112344444321100012101221001233332100000232111112440001
Q gi|254780867|r 186 CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP 265 (478)
Q Consensus 186 s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~ 265 (478)
++++.+...... ..++..|+++|.|++|||.|+||+|+++|+++++++++.+|+++.+.+.|+.....
T Consensus 83 ~~~~~~~~~~~~-----------~~li~i~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~lst~~Kiap~~~l~~~~~~~~- 150 (346)
T MTH00070 83 EWTIMNMQTPLP-----------TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISQSLN- 150 (346)
T ss_pred HHHHHHHHHHHH-----------HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 177778877999-----------99999999998464824510999986544999999999999989999999998876-
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHH
Q ss_conf 12221000001222102222000001244544356421112442111111215778888643002320100110000267
Q gi|254780867|r 266 MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSL 345 (478)
Q Consensus 266 ~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~ 345 (478)
...+.++|++|+++|++.|++|+|+||++|||||+|+||++.++..++. ..+.|.+.|.+.+.++|......
T Consensus 151 -----~~~l~~~~~lS~iiG~i~al~Q~~iKrlLAYSSI~h~G~ml~~l~~~~~---~~~~y~~~Y~~~~~~lf~~~~~~ 222 (346)
T MTH00070 151 -----SNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMILILTFSPH---LTLLNLLIYLIMTSSMFLMLMNL 222 (346)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----9999999999999999876511542078876589788999999998589---99999999999999999999997
Q ss_pred HHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87408764550210466523211478999986530366500006759999999996284999999999999999999999
Q gi|254780867|r 346 RRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRV 425 (478)
Q Consensus 346 ~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~ 425 (478)
+.++++|++|+.+++|..+..+.++.+|++|+||+.||++||+++++.++++.++++.+.+++|+++.+||+|+
T Consensus 223 ------~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYLRi 296 (346)
T MTH00070 223 ------NSTNINKLSTSWSKNPTLTSMMMLTLLSLGGLPPTTGFMPKWLILQELTKQNLTILATIMALSALLSLFFYLRL 296 (346)
T ss_pred ------CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------37869988462642299999999999998632176789999999999998484999999999999999999999
Q ss_pred HHHHHCCCCCCC
Q ss_conf 999964998778
Q gi|254780867|r 426 ISIMWFDQSTEC 437 (478)
Q Consensus 426 ~~~~f~~~~~~~ 437 (478)
.+.+++..+.++
T Consensus 297 ~~~~~~~~~~~~ 308 (346)
T MTH00070 297 SYAMSLTTSPNT 308 (346)
T ss_pred HHHHHHHCCCCC
T ss_conf 999998579999
No 90
>MTH00063 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=420.91 Aligned_cols=347 Identities=18% Similarity=0.195 Sum_probs=292.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
++...+..|..+..+...+..++..+..++..|+.++++ ..||+.+..++..+|.+++.|+|++.++++||.+++++|.
T Consensus 33 ~~~~~f~fD~~Sl~f~~~V~~Is~~V~~YS~~YM~~d~~-~~rF~~ll~lFv~sM~~LV~S~nll~l~lgWEglGl~Syl 111 (519)
T MTH00063 33 YWLINFDFDYVTFGVLLMLLICFYYALYYTFHYFGGSYA-SFLLNKIIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFF 111 (519)
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 489998639639999999999999999998887589998-4289999999999999999983599999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||.++.+ +++.+|+.+.++.+|+||..++.++...+...++... ...++..+...|+||+|
T Consensus 112 LI~fy~~-~~s~~aa~~t~l~nRiGDv~l~~~i~~~~~~~~~~~~------------------~~l~~~l~a~tKSAQ~P 172 (519)
T MTH00063 112 LILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSSSFL------------------CGLFFFLVVFTKSASFP 172 (519)
T ss_pred HHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHCCCC
T ss_conf 9837578-9999999999999999999999999999986238999------------------99999999998724074
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCE-ECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000121012210012333321000-0023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIP-KFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~-~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
||.|||+|++ ||||+||++|+.+ +++|+|.++|..+... . +.....+..+|.+|++.+++.|+.|+|+||++||||
T Consensus 173 F~~WLp~AM~-aPTPVSALvHSsTlVtAGVyLliR~~~~~~-~-~~~~~~l~~ig~lT~~~a~~~Al~q~DlKKiIA~ST 249 (519)
T MTH00063 173 FISWLLEAMR-APTPVSSLVHSSTLVAAGVWFVMRYDYLLG-F-SWLVYFFSVCLLLTIFITGVSSLFFNDLKKIVALST 249 (519)
T ss_pred CHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4565678737-999188999889999999999999889860-6-799999999999999999999997863889999888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
.+|+|+|+.+++.|.. ..+++|.++|++.|+.+|+++|.+.+..+ ++||++++||+.+.+|.+..++.++.+++.|+
T Consensus 250 lSQLG~M~~~lglG~~--~lA~fHL~~HA~FKAlLFl~aG~vIh~~~-~~QDir~mg~~~~~~p~~~~~~~i~~lsL~G~ 326 (519)
T MTH00063 250 CNNISWCVLYLIYGDV--ILSLFQLVSHGVSKCLLFMLVGDVMSGSG-GSQASNCVYSSILYGSWNLFYLFLLVLGLSGV 326 (519)
T ss_pred HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8799999999982759--99999999999999999985579997389-95156775386531259999999999998442
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 500006759999999996284999999999999999999999999964998778
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC 437 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~ 437 (478)
|.++||+||+.+++...+......-.+..+++.+|..|..|.+...+.++....
T Consensus 327 PFlsGFySKDlILe~~~~~~n~~~~~l~~~~~~lT~~YS~RL~~~~~~~~~~~s 380 (519)
T MTH00063 327 PFIGVFFSKHFLLSSFSSVFNVVVLLLVILCVFLSYLYSFRLCLILFGVKSSLS 380 (519)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 164067755999999998479999999999999999999999999984777741
No 91
>MTH00105 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=424.21 Aligned_cols=301 Identities=24% Similarity=0.456 Sum_probs=262.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 24206679999999999873146102212457778877776653200013445555540146204679988988530010
Q gi|254780867|r 105 CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT 184 (478)
Q Consensus 105 ~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~ 184 (478)
+.++..++.....|++..+.|+|++.+|+++|+.+++.+.++. +++++++.||+.||++++.+|+.++++|+.+.|..+
T Consensus 3 ~~~~ll~l~~~~~G~l~~~sS~n~~~l~v~lEl~~ls~~~l~~-~~~~~~s~eaa~KYfli~~~~S~i~L~gi~~~~~~~ 81 (345)
T MTH00105 3 PLILIIILSTLILGTMITMISSHWLLAWIGLEMNMLAIIPILM-KKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYS 81 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6999999999999999999998899999999999999999998-289942899999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 00001222211101343100001222211234444432110001210122100123333210000023211111244000
Q gi|254780867|r 185 GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFW 264 (478)
Q Consensus 185 gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~ 264 (478)
|++++.+..+.. ...++..|+++|+|++|||.|+||+||++|.+.++++++.+|.++...+.|......
T Consensus 82 g~~~~~~~~~~~-----------~~~li~~~l~~Klg~~PfH~WlPdv~~~~~~~~~~~l~t~~Kia~l~il~~~~~~~~ 150 (345)
T MTH00105 82 GQWTITKITNPL-----------ASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYQISPSIN 150 (345)
T ss_pred HCHHHHHHHHHH-----------HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 375788987799-----------999999999999803414877989997147999999999999999999999998730
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHH
Q ss_conf 11222100000122210222200000124454435642111244211111121577888864300232010011000026
Q gi|254780867|r 265 PMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILS 344 (478)
Q Consensus 265 ~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~ 344 (478)
..++..++++|+++|++.|++|+|+||++|||||+|+||++.++..++. ..++|.+.|.+.+.++|.+...
T Consensus 151 ------~~il~~~~~lS~i~G~~~al~Q~~lKrlLAYSSIsh~G~ml~~l~~~~~---~~~~y~~~Y~~~~~~lf~~~~~ 221 (345)
T MTH00105 151 ------PNLLLTMAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAILTYNPT---LTLLNLTIYIIMTLTMFMLLML 221 (345)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------9999999999999999999866013189999999889999999998499---9999999999999999999999
Q ss_pred HHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78740876455021046652321147899998653036650000675999999999628499999999999999999999
Q gi|254780867|r 345 LRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLR 424 (478)
Q Consensus 345 ~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~ 424 (478)
++.+++++++|+.+++|.++.++.++.+|++|+||+.||++||++++++++++.++++++.+++|+++++||+|
T Consensus 222 ------~~~~~i~~l~gl~~~~p~~~~~~~i~llSLaGiPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYlR 295 (345)
T MTH00105 222 ------NSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIIMPTLMAITALLNLYFYMR 295 (345)
T ss_pred ------HCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------57662998857553139999999999999853226568999999999999818499999999999999999999
Q ss_pred HHHHHHCC
Q ss_conf 99999649
Q gi|254780867|r 425 VISIMWFD 432 (478)
Q Consensus 425 ~~~~~f~~ 432 (478)
+++..+..
T Consensus 296 ii~~~~l~ 303 (345)
T MTH00105 296 LIYSTSLT 303 (345)
T ss_pred HHHHHHHH
T ss_conf 99999996
No 92
>MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=412.96 Aligned_cols=300 Identities=26% Similarity=0.446 Sum_probs=259.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 06679999999999873146102212457778877776653200013445555540146204679988988530010000
Q gi|254780867|r 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCT 187 (478)
Q Consensus 108 f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~ 187 (478)
+..++.....|++..++|+|++..|+++|+.+++.+.++.. ++++++.||+.|||+.|.+|+.++++|....|..+|++
T Consensus 6 ~~~ll~~l~lgt~i~~sS~~w~~~w~gLEln~ls~ipLi~~-~~~~~s~Eaa~KYFliqa~aS~~lL~~~~~~~~~tg~~ 84 (347)
T MTH00135 6 LTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQ-HHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQW 84 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988999999999999999999877-99983899999999999999999999999999999826
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 01222211101343100001222211234444432110001210122100123333210000023211111244000112
Q gi|254780867|r 188 GFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPML 267 (478)
Q Consensus 188 ~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~ 267 (478)
|+.+..+.. ...++..|+++|.|.+|||.|+||+||++|.+.+.++++.+|.++...+.|+..
T Consensus 85 ~i~~~~~~~-----------~~~li~~~l~~Klg~aPfH~W~Pdv~~g~~~~~~~~l~t~qKiap~~ll~~~~~------ 147 (347)
T MTH00135 85 DIQQLSHPL-----------ATTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP------ 147 (347)
T ss_pred HHHHHHHHH-----------HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf 888776599-----------999999999999803408864999983897899999999999999999999851------
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHH
Q ss_conf 22100000122210222200000124454435642111244211111121577888864300232010011000026787
Q gi|254780867|r 268 SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRR 347 (478)
Q Consensus 268 ~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~ 347 (478)
.....+..+|+.|+++|++.|++|+|+||++|||||+|+||++.++..++. ..+.|.+.|.+.+.++|.....
T Consensus 148 -~~~~~l~~l~~lS~~vG~~~al~Q~~lkrlLAYSSIsh~Gwml~~l~~~~~---~~~~~~~~Y~~~~~~~f~~~~~--- 220 (347)
T MTH00135 148 -TNPTLLITLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPS---LTLLALLTYIIMTSSAFLTFKL--- 220 (347)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH---
T ss_conf -009999999999999999987643416799999988889999999997378---9999999999999999999998---
Q ss_pred HCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 40876455021046652321147899998653036650000675999999999628499999999999999999999999
Q gi|254780867|r 348 KDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVIS 427 (478)
Q Consensus 348 ~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~ 427 (478)
.+.+++++++|+.+++|..+..+.+..+|++|+||+.||++||++++++.+++.++++++.+++|+++.+||+|+.+
T Consensus 221 ---~~~~~i~~l~~~~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~il~~li~~~~~~la~i~il~SlislfyYlRi~y 297 (347)
T MTH00135 221 ---NSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLCY 297 (347)
T ss_pred ---HCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---37358988756142019999999999999853216668999999999999828499999999999999999999999
Q ss_pred HHHCCCCC
Q ss_conf 99649987
Q gi|254780867|r 428 IMWFDQST 435 (478)
Q Consensus 428 ~~f~~~~~ 435 (478)
.+++..+.
T Consensus 298 ~~~~~~~p 305 (347)
T MTH00135 298 AMTLTISP 305 (347)
T ss_pred HHHHCCCC
T ss_conf 99971899
No 93
>MTH00094 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=406.90 Aligned_cols=354 Identities=17% Similarity=0.221 Sum_probs=289.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31676410079999999999999999999999632100224206679999999999873146102212457778877776
Q gi|254780867|r 66 LGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVL 145 (478)
Q Consensus 66 ~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~L 145 (478)
.+..+..|..+..+..+....... .... ..++ +.+..+..+...-+.+.+.+.|++.+|++||...+|++.+
T Consensus 36 ~~~~f~~d~~s~~l~il~~~~~~~---~~~~--s~~~---~~~~~~~~~l~~~li~~F~s~nl~lFYiffE~sLIP~~~L 107 (409)
T MTH00094 36 SGLFFFFDSFSFLLLIFMSLFILG---LVLM--SEKN---YNLLILSNLLVFICVFFFVSSNLWMLYLFFELSMFPILIM 107 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 448999878999999999999999---9999--8330---4999999999999999999989999999999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65320001344555554014620467998898853001000001222211101343100001222211234444432110
Q gi|254780867|r 146 IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225 (478)
Q Consensus 146 I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPf 225 (478)
|..|+.++|+.+|+.+.+.++.+++..++..+...+...+..+++...+ ......++.++++|.|++|+
T Consensus 108 I~~wG~q~eR~~A~~y~l~YTl~~SlplL~~i~~~~~~~~~~~~~~~~~-----------~~~~~~l~laFlvK~Plfp~ 176 (409)
T MTH00094 108 ILGYGSQIEKINSSYYLIFYAAFFSFPFLFVYFKNFFFLNFVYFDFFLS-----------WEMKFILSLMFMVKFPVYFL 176 (409)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-----------HHHHHHHHHHHHHHHHHCCC
T ss_conf 9960982999999999999999999999999999999974231678999-----------99999999999999636313
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00121012210012333321000002321111124400011222100000122210222200000124454435642111
Q gi|254780867|r 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305 (478)
Q Consensus 226 H~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~ 305 (478)
|.||||||.|||+++|++++++..|.|.|++.|+...... ........+|++++++|++.|++|+|+||++|||||+
T Consensus 177 H~WLP~AHvEAP~~gSmiLAGvLlKlG~YGl~R~~~~~~~---~~~~~~~~l~l~g~v~~sl~~l~Q~DlK~liAYSSVs 253 (409)
T MTH00094 177 HLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLSF---VHNNYWILLSLLGMILSSFCCVFQSDSKSLAAYSSVT 253 (409)
T ss_pred CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 1237365510883899999999998989999999998879---8999999999999999999999877488999981398
Q ss_pred CCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 244211111121-5778888643002320100110000267874087645502104665232114789999865303665
Q gi|254780867|r 306 HAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIP 384 (478)
Q Consensus 306 q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlP 384 (478)
|||+++.|+... ..|..|++.|+++|++.++++|..+|.+++|+| +|++.++||+.+++|.++..+.+..++..|+|
T Consensus 254 HMg~v~~gl~~~~~~g~~Gal~~mi~HGl~ss~LF~l~g~~y~r~~--sR~i~~~~Gl~~~~P~~~~~~~l~~l~n~g~P 331 (409)
T MTH00094 254 HMSFLLLSLVFMSMSGKLSGLLLMLAHGYTSTLMFYFIGEFYHISK--SRLIYFMNSFFNSSMIFSILFSLVFLSNSGIP 331 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999960899999899999887777799998858998236--55599869978786999999999999985589
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 000067599999999962849999999999999999999999999649987786556733
Q gi|254780867|r 385 PFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKE 444 (478)
Q Consensus 385 p~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~ 444 (478)
|+.||+||+.++.+.++.+ ++....+.++..+++.|.++.+.....||........+..
T Consensus 332 p~~~F~sE~lii~s~~~~~-~~~~~~~~~~~~lsa~Ysl~ly~~~~~Gk~~s~~~~~~~~ 390 (409)
T MTH00094 332 PSLSFFSEFLSISNFFSMN-KFSFFFIFFYFIVSFYYSLFLITSSLMGKKFSNFNKWNFG 390 (409)
T ss_pred CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 7450999999999999998-9999999999999999999999996668773311047600
No 94
>MTH00144 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=413.02 Aligned_cols=305 Identities=26% Similarity=0.474 Sum_probs=264.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 24206679999999999873146102212457778877776653200013445555540146204679988988530010
Q gi|254780867|r 105 CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT 184 (478)
Q Consensus 105 ~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~ 184 (478)
..++..++++...|+++.+.|+|++++|+++|+.++++|.++..++ ++++.||+.||++.|.+|+.+++.|+.+.|..+
T Consensus 5 ~p~~~~f~~l~~~g~~~~~ss~~~~~l~v~lEl~sl~~~~Li~~~~-~~~s~eaa~KYfl~~~~~S~~~L~gi~l~y~~~ 83 (329)
T MTH00144 5 SPSNLLFLFVMLMGTLLSLSSSHWLGVWVGLELNLIGFLPLLNIKG-KSSEKESSMKYFIIQSLGSSLLIMGSVIMYNMS 83 (329)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8799999999999999999998999999999999999999997599-963899999999999999999999999999988
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 00001222211101343100001222211234444432110001210122100123333210000023211111244000
Q gi|254780867|r 185 GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFW 264 (478)
Q Consensus 185 gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~ 264 (478)
|+.++. ..++..|+++|+|++|||.|+||+|+++|++...++++++|+++.+.+.+....
T Consensus 84 g~~~~~------------------~~li~~gl~~Klg~~PfH~Wlpdv~~~~~~~~~~~l~t~~Ki~~~~~l~~~~~~-- 143 (329)
T MTH00144 84 FSSSFF------------------SLLLLSGLVLKLGGFPFHFWVPSVTKGLSWLSLFLMLTWQKVAPLFLLSLILDL-- 143 (329)
T ss_pred HCHHHH------------------HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_conf 566999------------------999999999987544176407889814879999999999999999999999612--
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHH
Q ss_conf 11222100000122210222200000124454435642111244211111121577888864300232010011000026
Q gi|254780867|r 265 PMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILS 344 (478)
Q Consensus 265 ~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~ 344 (478)
+.....+..++++|+++|++.|++|+|+||++|||||+|+||+++++..+. .....|.+.|.+.+..++...+
T Consensus 144 ---~~~~~~l~~l~~lS~iiG~l~al~q~~iKrlLAYSSI~~~G~ml~~i~~~~---~~~~~y~~~y~~~~~~l~~~~~- 216 (329)
T MTH00144 144 ---NLLLMSLMVISVLSAIVGSIGGLNQTSVRLMLAYSSISHLGWMLSGILIGS---SLMWGYFLIYSLSLGFLFYSLS- 216 (329)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-
T ss_conf ---107999999999999999999874421327889868988999999999869---9999999999999999999999-
Q ss_pred HHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78740876455021046652321147899998653036650000675999999999628499999999999999999999
Q gi|254780867|r 345 LRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLR 424 (478)
Q Consensus 345 ~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~ 424 (478)
.++.++++|+.+++|..+..+.++.+|++|+||++||++||++++++++++.++.+++.+++|+++.+||+|
T Consensus 217 --------~~~~~~~~~~~~~~~~~~~~~~i~~lSlaGiPP~~GF~~K~~il~~~~~~~~~~l~~i~ll~S~is~~yYlr 288 (329)
T MTH00144 217 --------GGDCLSMKSLTSLNPSNNLSISLLLLSLGGLPPFLGFLSKLLVLLSSMEMNMILLIVALILGSLISLYFYLN 288 (329)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf --------879999987988719999999999999986547877999999999999858599999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCC
Q ss_conf 999996499877865567332
Q gi|254780867|r 425 VISIMWFDQSTECVVVVAKEM 445 (478)
Q Consensus 425 ~~~~~f~~~~~~~~~~~~~~~ 445 (478)
+++.++.+++........+.+
T Consensus 289 i~~~~~~~~~~~~~~~~~~~~ 309 (329)
T MTH00144 289 FFYSLVIKSYFLSNSTNMKSL 309 (329)
T ss_pred HHHHHHHHCCCCCCCHHHHHH
T ss_conf 999999867999984578888
No 95
>MTH00011 ND2 NADH dehydrogenase subunit 2; Validated
Probab=100.00 E-value=0 Score=410.05 Aligned_cols=327 Identities=24% Similarity=0.374 Sum_probs=275.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 20667999999999987314610221245777887777665320001344555554014620467998898853001000
Q gi|254780867|r 107 EFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGC 186 (478)
Q Consensus 107 ~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs 186 (478)
++..++.....|++..++|+|++.+|+++|+.+++.|.++..+ +++++.||+.||++.|.+|+.++++|....+...+.
T Consensus 7 ~~~lf~~~li~g~l~~isS~~~~~lwvglEl~~l~~~~Li~~~-~~~~s~eaa~KYFl~qs~~S~~~L~g~~~~~~~~~~ 85 (333)
T MTH00011 7 TMLLFFSTLTMGTLMALSSNNWLFLWMGMELNLLSFVPLIASS-QMNQETEAAVKYFLAQALGSGLLLMSSVMSMMWSSS 85 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999899999999999999999999859-995089999999999999999999999999998888
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 00122221110134310000122221123444443211000121012210012333321000002321111124400011
Q gi|254780867|r 187 TGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM 266 (478)
Q Consensus 187 ~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~ 266 (478)
.... ..+..+++.|+++|.|.+|||.|+||+|+++|++.++++++.+|+++...+.+....
T Consensus 86 ~~~~---------------~~~~~li~~~l~~Klg~~PfH~W~pdv~~~~~~~~~~~lst~~Ki~~l~~l~~~~~~---- 146 (333)
T MTH00011 86 SLMK---------------NTTALMLLLSILLKLGSAPCHFWYPSVMSSISWLSCLILSTWQKLAPLSILNFITPH---- 146 (333)
T ss_pred HHHH---------------HHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 8877---------------899999999999998002122033888737978999999999999899999999742----
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHH
Q ss_conf 22210000012221022220000012445443564211124421111112157788886430023201001100002678
Q gi|254780867|r 267 LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLR 346 (478)
Q Consensus 267 ~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~ 346 (478)
.....+..++..|+++|++.|++|+|+||++|||||+|+||++.+... .+......|...|.+.+..+|.+.+...
T Consensus 147 --~~~~~~~~~~~lS~lvG~i~al~Q~~lKrllAYSSI~h~G~~l~~~~~--~~~~~~~~y~~~y~~~~~~lf~~~~~~~ 222 (333)
T MTH00011 147 --NITAYILSMAAMNALVGGLGGMNQTQLRALMAYSSIGHLGWMMSMAIV--FKPSIFIIYFMVYCIITSPLMLMMFYLS 222 (333)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --069999999999999998754430230099999999999999999998--5699999999999999999999999998
Q ss_pred HHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74087645502104665232114789999865303665000067599999999962849999999999999999999999
Q gi|254780867|r 347 RKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVI 426 (478)
Q Consensus 347 ~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~ 426 (478)
. ++.++.+|+.|++|.++..+.+..+|++|+||+.||++||++++++.+++.++++.+.+++|+++.+||+|++
T Consensus 223 ~------~~~~~~~~l~~~~~~~~~~~~i~llSLaGiPP~~GF~~K~~i~~~~~~~g~~~l~~~lil~S~isl~yYlRi~ 296 (333)
T MTH00011 223 S------FNSKFNSKLSSMSYITFMSLMILLFSLGGLPPFTGFLPKWMIINSLTSSEMSLILLTLITGSLMNLFYYLSII 296 (333)
T ss_pred H------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6------4299998398885999999999998762131012188999999999987839999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9996499877865567332189999999999999997
Q gi|254780867|r 427 SIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIE 463 (478)
Q Consensus 427 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (478)
+.+++++|+++..+.++.+........++.+..+++|
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 333 (333)
T MTH00011 297 FNFITMMPTCSNLTSAPTPGANLILTSICTLTLGLAP 333 (333)
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9998179999988889842699999999999970899
No 96
>MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=395.11 Aligned_cols=304 Identities=21% Similarity=0.349 Sum_probs=260.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 20667999999999987314610221245777887777665320001344555554014620467998898853001000
Q gi|254780867|r 107 EFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGC 186 (478)
Q Consensus 107 ~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs 186 (478)
+++.++++...|+++.++|+|++.+|+++|+.+++.+.++..++ ++++.||+.||++.|.+|+.++++|+.+.|..+|+
T Consensus 3 ~~~~~~l~~~~g~l~~vsS~n~~~~wvglEl~~l~~~~li~~~~-~~~s~ea~~KYFiiq~~gS~~~L~g~~l~~~~~~~ 81 (325)
T MTH00197 3 SSFFFYIFMVGGVLLSLSSSNWFLVWVGLEMNLICFIPLLSQAK-SLSEIESAFKYFLFQEVGSYLVLVGGLLSFLPLPL 81 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999999999999999998699-93189999999999999999999999999999863
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 00122221110134310000122221123444443211000121012210012333321000002321111124400011
Q gi|254780867|r 187 TGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM 266 (478)
Q Consensus 187 ~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~ 266 (478)
.+... ..++.+|+++|+|++|||.|+||+|+++|+..++++++.+|+++...+.+....
T Consensus 82 ~~~~~-----------------~~li~~gl~~KlG~~PfH~W~p~v~~~~~~~~~~ll~t~~Ki~pl~il~~~~~~---- 140 (325)
T MTH00197 82 ETLGW-----------------GALVISGLSVKLGVAPFHFWVPPVVSSVSWFNCFLLLVWQKLAPLFILASLSSS---- 140 (325)
T ss_pred HHHHH-----------------HHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_conf 89999-----------------999999999985765301044788767719999999999999999999995433----
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHH
Q ss_conf 22210000012221022220000012445443564211124421111112157788886430023201001100002678
Q gi|254780867|r 267 LSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLR 346 (478)
Q Consensus 267 ~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~ 346 (478)
...+.+++++|+++|++.|++|+|+||++|||||+|+||++++...+ ......|...|.+...+.+.....
T Consensus 141 ----~~~l~~~~~lS~~~G~i~al~Q~~iKrlLAYSSI~h~G~~l~~~~~~---~~~~~~y~~~Y~~~~~~~~~~l~~-- 211 (325)
T MTH00197 141 ----KIGLSWCGVTSVLWGAIGMMGQSNIRQILAYSSINQTGWMLSVIVYS---PSILPFYFLIYFTIMVALLLFLSQ-- 211 (325)
T ss_pred ----HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf ----68999999999999876403404402999998898899999999985---999999999999999999999999--
Q ss_pred HHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74087645502104665232114789999865303665000067599999999962849999999999999999999999
Q gi|254780867|r 347 RKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVI 426 (478)
Q Consensus 347 ~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~ 426 (478)
.+.++.++.+|+.+++|..+..+.++.+|++|+||++||++||+++++.++++.++.+++.+++|+++.+||+|+.
T Consensus 212 ----~~~~~~~~~~~l~~~~~~~~~~~~l~~lSLaGiPPf~GF~~K~~ii~~~i~~~~~~l~~i~ll~S~isl~yYLrl~ 287 (325)
T MTH00197 212 ----MNFYASFSQKNVPDTMSWGLMLLGLSLLSLSGFPPLVGFFPKWLSVEVLLSSGSSLLTFLVMIASCFSLYAYISLG 287 (325)
T ss_pred ----HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----8770898987266536999999999999986304386699999999999982839999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCC
Q ss_conf 9996499877865567332
Q gi|254780867|r 427 SIMWFDQSTECVVVVAKEM 445 (478)
Q Consensus 427 ~~~f~~~~~~~~~~~~~~~ 445 (478)
+.+++.+++....+.+.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~ 306 (325)
T MTH00197 288 YKILNWAKNVLMSISPGNY 306 (325)
T ss_pred HHHHHCCCCCCCCCCCHHH
T ss_conf 9999809876477784057
No 97
>PRK08168 NADH dehydrogenase subunit L; Provisional
Probab=100.00 E-value=0 Score=384.58 Aligned_cols=280 Identities=16% Similarity=0.164 Sum_probs=249.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
.....+++|++|..+..++...+.++..|+.+|++.|++ ..||+..+.++..+|++++.|||++.+|++||.+++++|.
T Consensus 59 ~~~~~lrvD~LS~~MllLVs~Ig~vV~~YS~~YM~ge~~-~~RFf~~L~lfl~aml~LVlA~NLl~L~~~WE~~gL~sy~ 137 (514)
T PRK08168 59 ASAPWLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPG-QARYVRALAGTLASVALLVTSNHLLVLVAAWIGISLALHR 137 (514)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 678504137899999999999999999997997689998-2659999999999999999976499999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
||++|++|+++.+++.|+++++++||..++.|+.++|..+||+|++++.+.......+.....+..+++.|...|++|||
T Consensus 138 LI~f~~er~~A~~AA~Kafl~~riGd~~LL~a~~ll~~~~GT~~i~~i~~~~~~~~~~~~l~~a~lLL~laA~~KSAQfP 217 (514)
T PRK08168 138 LLTFYPDRPRARLAAHKKFIASRLAELLLLAAAGLLYLEVGSLSLADILQQVAADGLSLSLQAAALLLALAALLKTAQLP 217 (514)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98324998889999999999999999999999999999969873999999874456765899999999999998851173
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
||.||||+|| +||||||++|+.++++|+|.++|+.+.+.. .+.....+.++|.+|+++|+..++.|+|+||.|||||+
T Consensus 218 fH~WLp~AMe-aPTPVSALLHAg~V~AG~~LLiR~~pl~~~-ap~a~~~l~~iG~~Tal~galval~Q~diK~~LAySTv 295 (514)
T PRK08168 218 LHGWLIQVME-APTPVSALLHAGVVNLGGYLLLRFAPLLAL-APPAQWLLVLVGGLTAVLAALVMLTRISIKVRLAWSTC 295 (514)
T ss_pred CCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7331798865-898099999999999999999998388643-89999999999999999999999988648899999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHC
Q ss_conf 124421111112157788886430023201001100002678740
Q gi|254780867|r 305 GHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKD 349 (478)
Q Consensus 305 ~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~ 349 (478)
+|||||++.+|.|. ...+++|++.|++.|..+|++.|.+.++.
T Consensus 296 sQmGfM~l~~GlG~--~~~Al~HlvaHa~fKA~lFL~sGsvv~~~ 338 (514)
T PRK08168 296 AQMGFMLLECGLGL--YELALLHLVAHSLYKAHAFLSAGEAVEDA 338 (514)
T ss_pred HHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 99999999987463--98999999999999999997652489998
No 98
>MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=391.38 Aligned_cols=308 Identities=28% Similarity=0.479 Sum_probs=254.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 06679999999999873146102212457778877776653200013445555540146204679988988530010000
Q gi|254780867|r 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCT 187 (478)
Q Consensus 108 f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~ 187 (478)
...++.+...|++..+.|+|++.+|++||+.+++.+.++. +++++++.||+.||++.|.+||.+++.|+...|..+++.
T Consensus 6 ~~i~~~~~~~g~l~~~ss~~~~~lwv~lEi~~l~~~~l~~-~~~~~~s~ea~~KYfi~q~~~S~~~L~~~~~~~~~~~~~ 84 (336)
T MTH00160 6 KILFLSTLILGTLISISSNSWFGAWMGLEINLLSFIPLIS-NKKNLLSSESSLKYFLIQALASSMLLFSIILMMLNSFFN 84 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998999999999999999999998-489941799999999999999999999999999998777
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 01222211101343100001222211234444432110001210122100123333210000023211111244000112
Q gi|254780867|r 188 GFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPML 267 (478)
Q Consensus 188 ~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~ 267 (478)
+.. ...++..|+.+|.|++|||.|+||+||++|++.+.++++.+|.++.+.+.+..
T Consensus 85 ~~~-----------------~~~li~~~l~~Klg~~PfH~Wlpdv~~~~~~~~~~~lst~~Ki~pl~~l~~~~------- 140 (336)
T MTH00160 85 NSF-----------------SSMMINSSLLLKLGAAPFHFWFPSVMEGLSWINCFILMTWQKIAPLILLSYII------- 140 (336)
T ss_pred HHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 899-----------------99999999999986402886599998478789999999999999999999998-------
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHH
Q ss_conf 22100000122210222200000124454435642111244211111121577888864300232010011000026787
Q gi|254780867|r 268 SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRR 347 (478)
Q Consensus 268 ~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~ 347 (478)
.....+..++++|+++|++.|++|+|+||++|||||+|+||++.++..+.. ....|...|.+...+.+... +
T Consensus 141 -~~~~~l~~~~~lS~~~G~~~al~q~~iKrllaySSI~~~G~ml~~~~~~~~---~~~~y~~~Y~~~~~~~~~~~----~ 212 (336)
T MTH00160 141 -NINSFIIILIILSAIIGALGGLNQTSLRKLLAYSSINHLGWMLSAMMISEN---LWLIYFLIYSIISLSIILLF----N 212 (336)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----H
T ss_conf -578999999999999999987747778999999889889999999998699---99999999999999999999----8
Q ss_pred HCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 40876455021046652321147899998653036650000675999999999628499999999999999999999999
Q gi|254780867|r 348 KDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVIS 427 (478)
Q Consensus 348 ~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~ 427 (478)
+ .+.+++++++|+.+++|..+.++.++.+|++|+||+.||++||.+++++.+++.++++++.+++|+++++||+|+++
T Consensus 213 ~--~~~~~~~~~~~~~~~~p~~~~~~~i~~lSL~GiPP~~GF~~K~~ii~~~~~~~~~~l~~~~il~S~is~~yYlri~~ 290 (336)
T MTH00160 213 K--FNIFHLNQLFNSMNMSKIIKFLLFLNLLSLGGLPPFLGFFPKWIVIQFLILNNMYFLLFILIMSSLITLYFYLRISY 290 (336)
T ss_pred H--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8--36446998865543149999999999987668851416899999999999837299999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99649987786556733218999
Q gi|254780867|r 428 IMWFDQSTECVVVVAKEMRLFIF 450 (478)
Q Consensus 428 ~~f~~~~~~~~~~~~~~~~~~~~ 450 (478)
..|+.++++...+.+++.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~ 313 (336)
T MTH00160 291 SSFMLNYSENKWNLNKKNKSMIL 313 (336)
T ss_pred HHHHCCCCCCCHHHHCCCHHHHH
T ss_conf 99975898753156405427999
No 99
>KOG4845 consensus
Probab=100.00 E-value=0 Score=370.63 Aligned_cols=396 Identities=19% Similarity=0.279 Sum_probs=327.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
..+..+..|.+|.....+.. .++-.......++.+.++++|..+......++++.+.+.|++.+|++||...+|.+.
T Consensus 51 ~~~~~lgiD~lS~~lliLtt---~i~~l~i~as~~~~~~~~k~~l~~~lil~~~~I~~F~~~dLlmFYiffE~~lIP~l~ 127 (452)
T KOG4845 51 WISLFLGIDGLSFGLLILTT---FIIPLIILASEKGNNNYKKLFLILSLILVFLLIITFSSSDLLMFYIFFELSLIPTLV 127 (452)
T ss_pred HEEEEEEECHHHHHHHHHHH---HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01257743617889999999---999999996053556333489999999999999976078999999999740777999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
+|..|++|+|+.+||.+.+.++.++|..+++|+...-...|+.|+.-..-. .......++-.....++|.+|++++|
T Consensus 128 lI~~wG~q~erl~aa~yflfYTl~~SlplLi~il~~~~~~gs~~~~~~~lt---~~~~~~~~lm~i~~~~aF~VK~Pi~~ 204 (452)
T KOG4845 128 LILGWGSQPERLNAAYYFLFYTLLGSLPLLIGILYINNYGGSLNFLLLNLT---SYPFVISILMYIALLLAFAVKMPIYP 204 (452)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 998716857887778999999998559999999999613653235888712---20889999999999999998386134
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
.|.||||||.|||+..|.+++++..|.|.|++.|+.....+......+....++.+.+++++..+.+|+|.|+++|||||
T Consensus 205 lHlWLPkAHvEAp~sgsMlLAGilLKlG~yG~lR~~~il~~~t~~~s~~~l~is~igiI~~S~~c~rQ~DLK~lIAYSSV 284 (452)
T KOG4845 205 LHLWLPKAHVEAPTSGSMLLAGILLKLGTYGFLRINMILPSATLVHSPVWLVISLIGIIYTSSTCLRQTDLKKLIAYSSV 284 (452)
T ss_pred HEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 10324342046864174999989997277420248776015765113099999999999985027340127989987236
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 12442111111-21577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFS-TGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~-~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
+|||++++|+. .+..+..|++..+++|++...++|.++|..++|.| +|.++.+||+...+|..+..+.+..++..+.
T Consensus 285 sHM~~v~igi~s~T~~g~~GsillMiaHGl~ss~LF~lag~~YdR~~--sr~m~~~~Gl~ssmp~m~~~f~~~slANla~ 362 (452)
T KOG4845 285 SHMGFVLIGILSITMWGLIGSILLMIAHGLTSSALFCLAGVSYDRSG--SRMMYFMGGLFSSMPIMGTWFFLLSLANLAL 362 (452)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHCC--CEEHHHHCCHHHHCHHHHHHHHHHHHHHCCC
T ss_conf 77788998763045411025799999813317699997164252125--1532442118775679999999999974579
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHH
Q ss_conf 500006759999999996284999999999999999999999999964998778655---67332189999999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV---VAKEMRLFIFGSILFVTGYF 460 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 460 (478)
||+++|.+|+.++.+.++.+ ....++..++.++++.|.+..+.....||-.+.... ...++...+.....-....+
T Consensus 363 Ppt~~flgEf~vl~~~~s~s-~~~~~l~~i~milta~YsL~l~t~~~~Gkl~~~~nsf~~s~~Re~~Lmi~~l~pl~~l~ 441 (452)
T KOG4845 363 PPTSSFLGEFSVLVGIFSWS-KIMFVLIAIGMILTAAYSLYLYTSSQMGKLYHNFNSFSDSFSRELVLMIYHLLPLSLLG 441 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHE
T ss_conf 96266788889999899999-99999999999999999999999998645525632347788731355899999878541
Q ss_pred HHHHHHHHH
Q ss_conf 997676589
Q gi|254780867|r 461 LIENILNSS 469 (478)
Q Consensus 461 ~~~~~~~~~ 469 (478)
++|...++.
T Consensus 442 l~pd~~~~~ 450 (452)
T KOG4845 442 LYPDFFLSL 450 (452)
T ss_pred ECHHHHHHH
T ss_conf 280886631
No 100
>PRK08601 NADH dehydrogenase subunit 5; Validated
Probab=100.00 E-value=0 Score=370.15 Aligned_cols=301 Identities=17% Similarity=0.171 Sum_probs=252.0
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 99999999971322100316764100799999999999999999999996321002242066799999999998731461
Q gi|254780867|r 49 LSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDM 128 (478)
Q Consensus 49 l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l 128 (478)
+.......-.....+..-.+.+..|.+|..+..++...+.++..|+.+|+.+++.. .||+.++.++..+|++++.|||+
T Consensus 44 lp~~v~l~~li~~~~~~~~g~F~lD~LS~lM~llVt~VG~lI~~YS~~YM~GD~~y-~RFFa~L~LF~~aMLlLVLSdNL 122 (506)
T PRK08601 44 LPVLVALIGLIGINGQHVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFPLFTFTTGFASLAWLSGDL 122 (506)
T ss_pred HHHHHHHHHHHHCCCCEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999998268864652533769899999999999999999989973899982-36999999999999999995869
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC-CCCCCCC
Q ss_conf 022124577788777766532000134455555401462046799889885300100000122221110134-3100001
Q gi|254780867|r 129 ISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH-RSFVLIV 207 (478)
Q Consensus 129 ~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~-~~~~~~~ 207 (478)
+.+|++||.+++++|.||+++++++++.+|+.|.+..+++|+..++.++.+++..+|+++++++........ ++.....
T Consensus 123 llLfvgWE~vgL~SylLIgf~~~~~~a~~AA~kaflv~rvGdv~Lllai~lL~~~~Gt~~~~~il~~~~~~~~~~~~~~~ 202 (506)
T PRK08601 123 RLMALCWGATLIGLTLLIGLNKFWKVPREAAKISGMLFLISWLALLGAIVWLFIATGEWQLTSVLTNENLALLGTWEKTG 202 (506)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999999999775877566899999999999799999999999999993862199987000332147336899
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 22221123444443211000121012210012333321000002321111124400011222100000122210222200
Q gi|254780867|r 208 GVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSV 287 (478)
Q Consensus 208 ~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~ 287 (478)
...+++.|...|++|+|||.||||++| +|||+||++|+.++++|+|.+.|+.+.+.+ +.....+.++|.+|+++|+.
T Consensus 203 i~lLL~~~a~~KsAQ~P~h~WLp~am~-~PTPVSAl~HA~mV~AGv~ll~R~~pl~~~--~~~~~~l~~ig~~T~l~~a~ 279 (506)
T PRK08601 203 INLLLILAVMIPAAQWPFHRWLIESAV-APTPVSAIMHAGIVNAGGVMLTRFSPLFHD--DIAQSILLIFSSISVLIGTG 279 (506)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999988411753455578766-898099999999999889999998898602--69999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCC
Q ss_conf 00012445443564211124421111112157788886430023201001100002678740876455
Q gi|254780867|r 288 VAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQN 355 (478)
Q Consensus 288 ~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~ 355 (478)
.++.|+|+||.+||||++|+|||++++|.|. ...+++|.++|++.|..+|++.|++.+|.+..++.
T Consensus 280 ~al~q~DiK~~lAyST~sQlG~M~~~~GlG~--~~~A~fHL~~Ha~FKA~LFL~aGSVVh~~~~~~~~ 345 (506)
T PRK08601 280 ISLVQVDYKRQLVGSTMAQMGFMLVQCALGA--YSAAIIHLILHGLFKATLFLQSGSIVKRFNIPKQA 345 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 9998877889999999999999999998071--98999999999999999995377865689999998
No 101
>MTH00062 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=364.16 Aligned_cols=350 Identities=17% Similarity=0.210 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
.+++.+..|..|..+..+.........+...+.. +++.++... +.....+..+.++|++.+|++||...+|.+.
T Consensus 38 ~~~~~f~~D~lS~~lilLt~~i~~~~~~~~~~~~----~~~~~~~l~--l~l~~lil~F~~~nll~FYifFE~sLIP~~~ 111 (419)
T MTH00062 38 VFNGLFIFDSLSFYLILLVLFLGLYSQVMLVNLL----SGVSRFFLF--LSLIFAILCFCVNNSLLFWFFYELSIIPLLY 111 (419)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7606994568788999999999999999999988----889999999--9999999999997999999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
+|..|+.++||.+|+.+.+.++.+|+..+++++..++...||+++.+..... ..+. .....++.+|++|.|++|
T Consensus 112 lI~~wG~q~eR~~A~~y~l~YTl~~SlplL~~il~l~~~~gs~~~~~~~~~~---~~~~---~~~~~~~laFlVK~Pmfp 185 (419)
T MTH00062 112 LLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSEWGSGD---SVSL---IIYYVLSFIFFTKVPLFP 185 (419)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC---HHHH---HHHHHHHHHHHHHHHHCC
T ss_conf 9988089489999999999999999999999999999865873099774320---4799---999999999999830500
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
+|.||||||.|||+++|++++++..|.|+|+++|+.....+.... ....+..+..+.+.+.|++|+|.||++|||||
T Consensus 186 ~H~WLPkAHvEAP~~gSmiLAGvLLKLG~YGl~R~~~~l~~~~~~---~~~~~~~~~~~~~~l~al~Q~D~K~lIAYSSV 262 (419)
T MTH00062 186 FHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGYFL---GYLFLCCLLSVFFLITACSELDGKRWLAFLSL 262 (419)
T ss_pred CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 221574021218808899999999999999999999875746799---99999999999999999986309999999508
Q ss_pred CCCCCCCCCCCCH-HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 1244211111121-577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 305 GHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 305 ~q~G~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
+|||+++.|+..+ ..|..|++.++++|++.++++|..++..++|.+ +|++...+|+.+.+|..+..+.+...+..|.
T Consensus 263 sHMg~v~~Gl~~~~~~g~~ga~~~ml~HGl~ss~LF~l~~~~Yer~~--SRsl~~~kG~~~~~p~l~~~~fl~~~~nm~~ 340 (419)
T MTH00062 263 SHIVVPVLGLFVGDWSSIYLSFFYCLGHGLSAGLVFLLLWCFYEVSG--SRNWVLLKSGVGGSLSMQVIIVFGFLSLCSF 340 (419)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88999999999805799999999999889989999999868872547--4999998150865289999999999997179
Q ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 50000675999999999628499999999999999999999999996499
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQ 433 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~ 433 (478)
||+.+|++|..++.+.... .+......+....+..|-+-.......+.
T Consensus 341 PPslnf~gEi~l~~s~~~~--~~~~~~~~~~~ff~~~~~l~l~~~~l~~~ 388 (419)
T MTH00062 341 PPTIQFFCEVFLVSSSSGV--LVYLLFWCIYLFFGGLVPLILLGHLLIRS 388 (419)
T ss_pred CCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_conf 9951499999999999999--99999999999999999999989787511
No 102
>KOG4668 consensus
Probab=100.00 E-value=0 Score=293.98 Aligned_cols=312 Identities=29% Similarity=0.466 Sum_probs=250.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 24206679999999999873146102212457778877776653200013445555540146204679988988530010
Q gi|254780867|r 105 CFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT 184 (478)
Q Consensus 105 ~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~ 184 (478)
..+|..+++....|+...+.|+|+++.|++||.+.+++|.+++. +++.++.||+.||+.+++.||..+++++..++...
T Consensus 3 ~~~f~~~~~~~~~~~~~~~~s~~l~~~~~~~e~~~l~s~~l~~~-~~~~~s~~a~~k~~l~~~~~~~~ll~~~~~~~~~~ 81 (355)
T KOG4668 3 INEFIFYILIPTAGMLILVTSNNLITMFVGWEGVGLCSYLLLGF-KKNPRSTEAAMKYFLTNRAGSFILLFGISGLYLSS 81 (355)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 22457999999876755501368999999999888888988876-26865568998778753665099999999999862
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCC
Q ss_conf 000012222111013431000012222112344444321100012101221001233332100-0002321111124400
Q gi|254780867|r 185 GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVF 263 (478)
Q Consensus 185 gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~ 263 (478)
|....+.. +..... ..........| .|.+++|||.|+||+|++ |+|+++..+.. .++.+.-.........
T Consensus 82 ~~~~~~~~-----~~~~~~-~~~~~~~~~~~--~ks~q~~f~~w~p~~~~g-ptpv~~~~~s~~~~v~a~~~~~v~~~~~ 152 (355)
T KOG4668 82 GLFGNEIG-----NNEYSS-ITLIILLIASG--GKSAQAPFHFWLPDAMEG-PTPVSATLSSSKTLVIAGLALAVRSIPL 152 (355)
T ss_pred CCCHHHHH-----HCCCCH-HHHHHHHHHHH--HHHCCCCCCCCCHHHHCC-CCCHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 64224453-----054304-89999999987--653147655567687549-9806665213301889999999872320
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHH
Q ss_conf 01122210000012221022220000012445443564211124421111112157788886430023201001100002
Q gi|254780867|r 264 WPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCIL 343 (478)
Q Consensus 264 ~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~ 343 (478)
....+.++......+..+...++..|..|+|.||.+||||++|.|++...+..+. ...+..|...|++.|..+|.+.+
T Consensus 153 ~~~~~~i~~~~~~~~~~s~~~~~~~a~~Q~~ikk~~A~Ss~~qlg~~~~~l~~~~--~~~~~~~~~t~~~~~allf~~~g 230 (355)
T KOG4668 153 LCSSPLIQQLKLILGILSMLFGALCALTQTDIKKILAFSSIGQLGYMMFSLKVGM--SNNAILHLATHALFKALLFMCYG 230 (355)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0055689999999888888999999998510787776640577626898603555--33145402279999999983557
Q ss_pred HHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHH
Q ss_conf 678740876455021046652321147899998653036650000675999999999628499999-9999999999999
Q gi|254780867|r 344 SLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAI-VALLSSVISAYYY 422 (478)
Q Consensus 344 ~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~-~~~~~s~~s~~y~ 422 (478)
.+.+....+ +|+++++|+.+..|.++..+.++.++++|+||+.||++|+++++.....+.+.++. +....+.++.+|+
T Consensus 231 sIi~~~~~~-~~i~~~~~l~~~~pl~~~sl~i~~lsl~Glpfl~gf~~k~~i~e~~~~~~~~~~~~~i~~~s~~l~~~y~ 309 (355)
T KOG4668 231 SIIHYLNLE-QDIRLMSGLLNLPPLLKLSLFIGLLSLGGLPFLAGFYSKDYIIETAFQNNLYALAPTILLTSVLLTLYYS 309 (355)
T ss_pred HHHHCCCCH-HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 776034421-0088750512557198999997447651844042452117999988763158999999999999898999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780867|r 423 LRVISIM 429 (478)
Q Consensus 423 ~~~~~~~ 429 (478)
.|..+..
T Consensus 310 ~~~~~~~ 316 (355)
T KOG4668 310 FRTGRMF 316 (355)
T ss_pred HHHHHHC
T ss_conf 9997721
No 103
>PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=4.3e-44 Score=256.53 Aligned_cols=311 Identities=20% Similarity=0.314 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
+|...+..++.....+...++.+...-++..+. +++-| -..-.+...+..+++.|.|+++++++||.|++++..
T Consensus 13 nfel~fdf~~qnqlia~afli~t~i~~Ly~isq-----~RklE-~li~~LY~gSsIivvfAgDfISmiIswEfMai~s~l 86 (504)
T PRK06588 13 NFELIFDFNPQNQLIALAFLIVTAILNLYTISQ-----NRKLE-CLIGSLYCLSSIICVFAADFISMIISLEFMTIFACI 86 (504)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 538998458422699999999999998986611-----52279-999999997687755565799999999999988401
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
+| + .++.+.++++||++++.+|+.+++.|+.+.+..||+..+..+.+...+.. ++..++++|+++++|..|
T Consensus 87 iI-f--s~~~~IKag~RYlivHlfGggLLLaGI~l~i~~TGnlaft~lte~V~n~e------L~~~LILiG~LINAA~pP 157 (504)
T PRK06588 87 II-F--CDQLKIKPARQYFLTHLFSSGLILIGMTLLIQTTSNTAFTSLTESVNNFE------LPAIFILAGCLINASAIF 157 (504)
T ss_pred EE-E--ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCC------HHHHHHHHHHHHHCCCCC
T ss_conf 68-8--27300236666457898633999987888523048500122433212431------259999999998037775
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
+|.|+||+|++|++..+.++++-++|..++.++|.+.-. +++.++|+..++||.+.|+.|+|+||++|||+|
T Consensus 158 f~aWL~DAYPeAS~SG~VFLsAFTTKtavyvLlRlFsGl--------eILi~lGi~MiiYGiIyALLENd~RRLLaYsiV 229 (504)
T PRK06588 158 VNGWVVNCYPIASSSGIVYLISFTTKVTLIIILKLFSGL--------EILKFFGISMIIYGLVFSLIEKNLKRLICYLTV 229 (504)
T ss_pred CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 000035657566655302245788889999999975431--------899999799999999999998769999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH-HCCCCCHHCCCCHH-HHHHHHHCCCCCCCCHHHCCCC--CCCCHHHHHHHHHHHHC
Q ss_conf 12442111111215778888643-00232010011000-0267874087645502104665--23211478999986530
Q gi|254780867|r 305 GHAGYALIGFSTGMLGIVAMVRY-MVIYLIMMIGFFSC-ILSLRRKDGNNIQNISDLAGLS--RQDIFLTCALTIFLFSL 380 (478)
Q Consensus 305 ~q~G~i~~~l~~~~~~~~~~~~~-~~~~~~~~~~lf~~-~~~~~~~~~~~~~~i~~l~gl~--~~~P~~~~~~~i~~lsl 380 (478)
+|+|||+.|+|.++..+...+.- .+.|.+.. ++|.. ...+| ++. +++.+..+. +.+|.+-..+.+..+--
T Consensus 230 sQvGfmlAaIgI~sp~i~yli~~fif~hilyn-g~falyf~~ie--d~~---~iknyqdl~~t~~n~~ll~gfv~siliy 303 (504)
T PRK06588 230 SQLGFILAAISINSPNIAYLITSFIFIHILYN-GLFALYFTYIE--DEY---DIKNYQDLQNTQINLILLIGFVISILIY 303 (504)
T ss_pred HHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH-HHHHHHHEEEC--CCC---CCCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 87515146760599850999999999999985-18876540111--333---5331767733661644568889999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 366500006759999999996284
Q gi|254780867|r 381 AGIPPFAGFFGKYFLLISAVKREF 404 (478)
Q Consensus 381 ~GlPp~~GF~sK~~i~~~~~~~~~ 404 (478)
..+-|.+.=+-|..+-..+-+++.
T Consensus 304 ~silpi~ssyik~~i~n~l~~n~~ 327 (504)
T PRK06588 304 TSILPISSSYIKDEIANILNENNV 327 (504)
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCE
T ss_conf 630115368888999876254756
No 104
>MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=99.45 E-value=5.1e-14 Score=93.39 Aligned_cols=234 Identities=21% Similarity=0.318 Sum_probs=147.8
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
Q ss_conf 98731461022124577788777766532000134455555401462046799889885300100000122221110134
Q gi|254780867|r 121 CMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH 200 (478)
Q Consensus 121 ~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~ 200 (478)
....++|.+.-|-.||.+++--..+.. .. ++.+.-..|++.|...|..+++--.. + +
T Consensus 6 l~~~~~N~~~WWs~fl~mtl~fv~L~k---~~-~~~~s~~nYfv~Qe~~gl~FLl~~~~-~-------~----------- 62 (273)
T MTH00091 6 LNFFSLNIIVWWSVFLLMTLLFVFLNK---GM-KSYSSLLNYFVWQESLGLFFLVFNLN-F-------F----------- 62 (273)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHH---CC-HHHHHHHHHHHHHHHHHHHHHHHHHH-H-------H-----------
T ss_conf 999981799999999999999999986---23-06899999999999999999999999-9-------9-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 31000012222112344444321100012101221001233332100000232111112440001122210000012221
Q gi|254780867|r 201 RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIG 280 (478)
Q Consensus 201 ~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~ 280 (478)
...-...|.|..|||.|.|++.++-..-..-.+-+.+|......+..... .....+-..
T Consensus 63 -----------~~~ilmmK~G~aPFHfW~~~v~~~l~~~~~~~flT~qKLp~l~il~~~~~----------~~~~~~lif 121 (273)
T MTH00091 63 -----------QFFFLMMKMGVAPFHFWVFSVTNGLSGWSLMWFLTFQKLPFLFVLLQIMD----------NFFFFLLFF 121 (273)
T ss_pred -----------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH
T ss_conf -----------99999999179718989999998735889999999989879999999999----------999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHC
Q ss_conf 02222000001244544356421112442111111215778888643002320100110000267874087645502104
Q gi|254780867|r 281 SMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLA 360 (478)
Q Consensus 281 t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~ 360 (478)
+.+.+.+....|++.|+++++||++|.+|++.+.-.+.. -...|...|.... + -.+..-.+.+ +
T Consensus 122 ~~~i~~~~~~~~ks~k~ll~~SS~~sf~Wmi~~~~~S~~---~~~~yf~~Y~~l~---~---~li~~~~~~~--~----- 185 (273)
T MTH00091 122 GIILCYLQMFVLKSYKNLLIISSTESFNWMILSFFFSLK---NVFVLFLYYFFLM---F---MLIPYFSSNK--E----- 185 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH---H---HHHHHHHCCC--H-----
T ss_conf 999999999999999999999986348899999999999---9999999999999---9---9999981120--2-----
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHH
Q ss_conf 665232114789999865303665000067599999999962849999--99999999999999
Q gi|254780867|r 361 GLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLA--IVALLSSVISAYYY 422 (478)
Q Consensus 361 gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~--~~~~~~s~~s~~y~ 422 (478)
....-.-..+...|+||+.||.-|+.++....+....... .....-++.+..|.
T Consensus 186 --------~~~~~~e~iL~f~nlPp~~~Ff~Ki~il~~~~~~~~~~~lfll~mMfls~~~~s~~ 241 (273)
T MTH00091 186 --------LNFFNWETILVFFNLPPSVTFFIKIFSLSEIFKLDGFFLLFLLFLMFLSVLSFSFW 241 (273)
T ss_pred --------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --------78999999999957994543999999999999999999999999999999999999
No 105
>MTH00059 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=98.22 E-value=1.1e-06 Score=53.54 Aligned_cols=257 Identities=16% Similarity=0.291 Sum_probs=149.5
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 9987314610221245777887777665320001344---5555540146204679988988530010000012222111
Q gi|254780867|r 120 LCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSI---EAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSL 196 (478)
Q Consensus 120 ~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~---~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~ 196 (478)
.....+||+..+|++.|+.+++.-+.-- .+++.... ++-+-|.+.+.+++.+++.|...- |.
T Consensus 19 ~~~~~sdsll~FWvfLEL~~LslIP~ff-~~~~~~~~~~~~sll~Yiv~sglSS~Liv~Gll~~----------~l---- 83 (288)
T MTH00059 19 LLCLLSDSLLGFWVFLELCGLSLIPCFF-LSGNSNVLNFYSSLLSYIVMSGISSSLIVSGLLFS----------SL---- 83 (288)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH----------HH----
T ss_conf 9999845599999999997787878997-04886510023588899998601189999999987----------48----
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 01343100001222211234444432110001210122100123333210000023211111244000112221000001
Q gi|254780867|r 197 FIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMC 276 (478)
Q Consensus 197 ~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~ 276 (478)
.-+++.|+..|=|+|||+.|+=.+..+...-+.=.+|+++|. .+..+-.+.+ . . -...+..
T Consensus 84 ------------~~f~ffGl~~KFGlFPF~~WvY~Vf~~~sW~vi~~iSvv~K~-piLf~~f~~~---~-~--~~~lv~~ 144 (288)
T MTH00059 84 ------------YFFFFFGFCVKFGLFPFMFWVYRVFSNSSWVVIWLISVVMKF-PVLFFSFFLQ---G-G--GLELVFV 144 (288)
T ss_pred ------------HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEHHHHHH-HHHHHHHHHH---C-C--CCEEEHH
T ss_conf ------------999999999997011256555653027876888772588876-8988667630---5-8--7234428
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCC
Q ss_conf 222102222000001-2445443564211124421111-11215778888643002320100110000267874087645
Q gi|254780867|r 277 VSIGSMVLGSVVAIR-QKDLKRLMAYSSIGHAGYALIG-FSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQ 354 (478)
Q Consensus 277 ~g~~t~i~g~~~al~-q~d~KrllAySsi~q~G~i~~~-l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~ 354 (478)
...+|+++-+..-.. .-+.+-.-+-.+++.-.-+..+ ...+.....-...+-..-+......+....
T Consensus 145 ~c~ltil~c~~l~W~~S~~W~~~WcH~~lSSs~~lvv~~~~~s~~~~~~i~~~Y~~Wss~~I~yls~~~----------- 213 (288)
T MTH00059 145 DCFLTILFCGFLFWFYSLSWEYVWCHISLSSSATLVVACFCLSFDLCFFIYLYYFVWSSGVIIYFSSLS----------- 213 (288)
T ss_pred HHHHHHHHHHHHHHEEECCHHHEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEEC-----------
T ss_conf 888999988676640307823466677714677999998851667889999999999874065688963-----------
Q ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 50210466523211478999986530366500006759999999996284999999999999999999999999964
Q gi|254780867|r 355 NISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWF 431 (478)
Q Consensus 355 ~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~ 431 (478)
+.++. |..-....++. +.+.|----.+=|...-......+.+.+.. =.+.+...-.|..|....-+.
T Consensus 214 ~~~~~----~~~~~~~f~~l-----Ll~~P~S~~l~YKl~v~~~I~~~s~~vll~-W~iYsfsEQ~~L~k~~~~~~~ 280 (288)
T MTH00059 214 DSNDL----KGYGFFGYCFL-----LLSTPVSFPLFYKLSVCYGIIYSSLYVLLV-WVIYSFSEQFFLFKLLVSYFV 280 (288)
T ss_pred CCCCC----CCCEEEEEHHH-----HHHCCCEEHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCEE
T ss_conf 55456----67443100243-----542454101056787778767735899999-999999999999999871402
No 106
>PRK12663 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=97.03 E-value=0.0095 Score=32.23 Aligned_cols=152 Identities=11% Similarity=-0.033 Sum_probs=63.8
Q ss_pred HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH-HHH
Q ss_conf 7788886430023201001100002678740876455021046652321147899998653036650000675999-999
Q gi|254780867|r 319 LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYF-LLI 397 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~-i~~ 397 (478)
.++.+.+.|.+.++..+.+.........+++-+ +++.+..-....-........+...+-++..|.|=+-=+. .++
T Consensus 324 ga~~~~~~h~~~k~~LFl~~g~i~~~~gt~~i~---~l~GL~~~~P~~a~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~ 400 (497)
T PRK12663 324 GAIFYLVHDIVVKTLLFLIAGSLVYLTGYRQLQ---YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALD 400 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH---HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999999999999999999971881089---86776877499999999999998528752518889999999998
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-H----HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9996284999999999999999999999999-9----6499877865567332189999999999999997676589999
Q gi|254780867|r 398 SAVKREFYVLAIVALLSSVISAYYYLRVISI-M----WFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENILNSSIMK 472 (478)
Q Consensus 398 ~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~-~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (478)
+.. .-......+..+.+........|.... - --.++++.+....-+........+.+.+.-....+...+..++
T Consensus 401 ~~~-~~~~~~~~~~~~~~~~y~~r~~~~~f~g~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~Gl~P~~~~~~~~~aa~~ 479 (497)
T PRK12663 401 NGA-YILLALMLITSLITMYSLFRIFFLAYWGDKPDGEEVNFKKIPLYRKRILSILVVVVIAMGIAAEPLLNLTQDAAEL 479 (497)
T ss_pred HCH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 186-9999999999999999999999999508999744457677987699999999999999995399999999999998
Q ss_pred HH
Q ss_conf 98
Q gi|254780867|r 473 IV 474 (478)
Q Consensus 473 ~~ 474 (478)
..
T Consensus 480 L~ 481 (497)
T PRK12663 480 LA 481 (497)
T ss_pred HH
T ss_conf 73
No 107
>pfam10125 NADHdeh_related NADH dehydrogenase I, subunit N related protein. This family comprises a set of NADH dehydrogenase I, subunit N related proteins found in archaea. Their exact function, has not, as yet, been determined.
Probab=96.77 E-value=0.00068 Score=38.44 Aligned_cols=113 Identities=18% Similarity=0.288 Sum_probs=90.3
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99999998731461022124577788777766532000134455555401462046799889885300100000122221
Q gi|254780867|r 115 AVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT 194 (478)
Q Consensus 115 ~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~ 194 (478)
.-....+...++|++++-+|..+..++--.+++-- +++...+|+++|=++..+++..+.-|..++-..+||++.-++.+
T Consensus 78 CGiAtagam~TgDlFnFtLFlaliGI~NIGIVsaV-k~~~VLnaAf~YGliamiaslPLFGgAaliLa~tGTLSi~EL~~ 156 (219)
T pfam10125 78 CGLATAGAMVTGDLFNFTLFLALIGISNIGIVSAV-KNEWVLNAAFNYGLIAMIATLPLFGGAALILAKTGTLSIWELSK 156 (219)
T ss_pred HHHHHHCCEEECCHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHC
T ss_conf 88865130001306779999999761122102104-17899987875538999864643315787765467404998852
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 110134310000122221123444443211000121012
Q gi|254780867|r 195 SLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVY 233 (478)
Q Consensus 195 ~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~ 233 (478)
... + ....+-.++.+|..-+.|.-||..=-.|..
T Consensus 157 ~~~----~-~l~~~k~l~~~Gv~GE~GvAPFYaaKAEmf 190 (219)
T pfam10125 157 MAG----D-VLLYAKILLAAGVIGETGVAPFYAAKAEMF 190 (219)
T ss_pred CCC----C-HHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 884----2-389999999977505467551577678885
No 108
>COG4078 Predicted membrane protein [Function unknown]
Probab=96.63 E-value=0.00042 Score=39.56 Aligned_cols=117 Identities=19% Similarity=0.327 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 99999999987314610221245777887777665320001344555554014620467998898853001000001222
Q gi|254780867|r 113 LMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQI 192 (478)
Q Consensus 113 l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l 192 (478)
...-...-+...++|++++-.|..+..++--.++. .-+|+...+++++|=.+..+++..++-|..++-..+||++..++
T Consensus 76 iVcglAtaGam~TgDlFnftLFlsL~GI~NiGivs-aV~~e~vL~aafqYGLiamiAsLPLFGgAaliLastGTLSv~EL 154 (221)
T COG4078 76 IVCGLATAGAMTTGDLFNFTLFLSLLGISNIGIVS-AVEDEFVLEAAFQYGLIAMIASLPLFGGAALILASTGTLSVHEL 154 (221)
T ss_pred HHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCEEE-HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHH
T ss_conf 99766404644433057799999997622011000-25689999989877489999606556751367743772368886
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 211101343100001222211234444432110001210122
Q gi|254780867|r 193 ATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYE 234 (478)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~ 234 (478)
.+.. .+.....+-.++..|..-+.|.-||..--.|-..
T Consensus 155 ~km~----~~~~l~f~k~ll~aGv~GEtGvaPFYA~KaemFR 192 (221)
T COG4078 155 MKMP----KGATLTFGKALLTAGVIGETGVAPFYAVKAEMFR 192 (221)
T ss_pred HCCC----CCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
T ss_conf 2699----9977449899987121244665605777799843
No 109
>pfam00662 Oxidored_q1_N NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus. This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Probab=90.47 E-value=0.15 Score=25.66 Aligned_cols=50 Identities=12% Similarity=0.186 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 100316764100799999999999999999999996321002242066799
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIML 113 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l 113 (478)
....+..+..|+++..+..++...+..+.+++.+|++++++. .||+..+.
T Consensus 12 ~~~~~~~~~~D~ls~~ml~vvt~Vs~lIhiyS~~YM~~D~~~-~RFf~yLs 61 (62)
T pfam00662 12 SFNINWGFLFDSLSLIFLSVVLTVSWLVHLYSIWYMSHDPNI-NRFFSYLS 61 (62)
T ss_pred CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHC
T ss_conf 894799989811589999999999999999968872179692-16774536
No 110
>pfam00420 Oxidored_q2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
Probab=83.93 E-value=2.3 Score=19.33 Aligned_cols=83 Identities=19% Similarity=0.378 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 679999999999873-14610221245777887777665320---00134455555401462046799889885300100
Q gi|254780867|r 110 VIMLMAVLGMLCMIS-ANDMISFYMSLELQSFALYVLIAMNR---KSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG 185 (478)
Q Consensus 110 ~l~l~~~~g~~~~~~-s~~l~~~~v~~E~~~i~~~~LI~~~~---~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g 185 (478)
....++..|..++.. ..|++...+++|++..+.+....... +++...--.+-.+..+.-....-+.=.+-.|...|
T Consensus 5 ~~~~lf~iGl~gl~~~r~~ll~~Ll~lE~m~~~~~l~~~~~~~~~~~~~~~~~~l~~l~iaa~E~aigLallv~~~R~~g 84 (96)
T pfam00420 5 LSILLFLIGLLGLLLNRKHLLSVLLCLELMMLSLFLLLVLFSLLLADPLPQALPLTLLVFAACEAALGLALLVALYRTHG 84 (96)
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999943279999999999999999999999998578414999999999999999999999999999617
Q ss_pred CCCHHHH
Q ss_conf 0001222
Q gi|254780867|r 186 CTGFSQI 192 (478)
Q Consensus 186 s~~~~~l 192 (478)
|.+.+++
T Consensus 85 t~~~~~l 91 (96)
T pfam00420 85 TDDVQSL 91 (96)
T ss_pred CCHHHHH
T ss_conf 6608661
No 111
>PRK06076 NADH dehydrogenase subunit H; Provisional
Probab=81.26 E-value=2.9 Score=18.75 Aligned_cols=90 Identities=16% Similarity=0.168 Sum_probs=53.7
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431---000012222112344444
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRS---FVLIVGVVLILVGLFFKM 220 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~---~~~~~~~~ll~~g~~~K~ 220 (478)
.+.++..+++-+.-++.|...-..--...+.+.+......+||+|+.++.+.-...... .....+....+++...|.
T Consensus 132 ~l~GwsS~s~Ys~iG~~R~~~q~isyEv~l~l~~~~~~l~~gs~~~~~i~~~q~~~~~~~~~~~~~~~~i~~~i~~lae~ 211 (335)
T PRK06076 132 ILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVMLAGSLNLSDIVNAQSGGLLSWNILPQPPGFVVFFIAAVAET 211 (335)
T ss_pred HHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87132069963235999999997878899999999999996488799999988522018999999999999999999983
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 321100012101221
Q gi|254780867|r 221 ALVPFHMWIPDVYEG 235 (478)
Q Consensus 221 ~~fPfH~Wlp~a~~~ 235 (478)
.-.||. +|++.+|
T Consensus 212 ~R~PFD--~~EaEsE 224 (335)
T PRK06076 212 NRHPFD--LPEAESE 224 (335)
T ss_pred CCCCCC--CCCCCHH
T ss_conf 899998--7756478
No 112
>COG0650 HyfC Formate hydrogenlyase subunit 4 [Energy production and conversion]
Probab=80.03 E-value=1.1 Score=21.10 Aligned_cols=75 Identities=21% Similarity=0.223 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 13445555540146204679988988530010000012222111013---4310000122221123444443211000
Q gi|254780867|r 153 VFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG---HRSFVLIVGVVLILVGLFFKMALVPFHM 227 (478)
Q Consensus 153 ~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~---~~~~~~~~~~~ll~~g~~~K~~~fPfH~ 227 (478)
+-..-++-|-+.+...+...+..+....+..+||.|..|+......+ ..+....++.+.+++....++|-.||..
T Consensus 124 pf~~iGasR~~~~~~~~E~~l~~~~~~~~~~~gs~~i~~i~~~~~~h~~~~~sl~~vl~aia~fi~~~~e~gk~Pfdi 201 (309)
T COG0650 124 PFGGIGASRELTLIALVEPPLLLVLFALALVAGSTNISDIVAYQAHHGPLLFSLPLVLAAIAFFILLFIETGKLPFDI 201 (309)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 854203999999999876899999999999956887999998886265600367799999999999999908998874
No 113
>pfam00146 NADHdh NADH dehydrogenase.
Probab=75.48 E-value=4.4 Score=17.77 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=50.2
Q ss_pred HHHHHHHHH--HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 777887777--665320001344555554014620467998898853001000001222211101343100001222211
Q gi|254780867|r 136 ELQSFALYV--LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLIL 213 (478)
Q Consensus 136 E~~~i~~~~--LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~ 213 (478)
-+.+++.|. +.++..+++-+.-++.|-..-..-=...+.+.+......+||+|+.++.+.-...........+....+
T Consensus 107 ~l~sl~~~~~~l~GwsS~skys~iG~~R~~~q~iSYEi~l~l~~~~~~~~~~s~~l~~i~~~q~~~~~~~~~~~~~i~~~ 186 (309)
T pfam00146 107 ALSSLAVYGVLMSGWASNSKYALLGALRAVAQTISYEVSLGLILLSIIILSGSFNLSDIVNAQELGWNILPQFPLFLMFF 186 (309)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99888999886100047853147504089884024636799999999998178709999998545888875677899999
Q ss_pred CCCCCCCCCCCCCH
Q ss_conf 23444443211000
Q gi|254780867|r 214 VGLFFKMALVPFHM 227 (478)
Q Consensus 214 ~g~~~K~~~fPfH~ 227 (478)
++...+..-.||..
T Consensus 187 i~~lae~~R~PFD~ 200 (309)
T pfam00146 187 ISTLAETNRAPFDL 200 (309)
T ss_pred HHHHHHHCCCCCCC
T ss_conf 99999968999988
No 114
>PRK05715 NADH dehydrogenase subunit K; Validated
Probab=71.51 E-value=5.5 Score=17.22 Aligned_cols=81 Identities=16% Similarity=0.265 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH---HHHHCCCCCC
Q ss_conf 999999999987314610221245777887777-665320001344555554014620467998898---8530010000
Q gi|254780867|r 112 MLMAVLGMLCMISANDMISFYMSLELQSFALYV-LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGI---SFIYGFTGCT 187 (478)
Q Consensus 112 ~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~-LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~---~~~y~~~gs~ 187 (478)
..++..|..+++...|.+..+.+.|++..+... ++++.+... ..++..-.++.-.++..=--+|. ...|...||.
T Consensus 11 ~~LF~iGl~Gvl~rRn~i~~lmsiElmLnavnl~fv~fs~~~~-~~~Gqv~~lfii~vAAaE~avgLAi~v~~~R~~~si 89 (99)
T PRK05715 11 AILFCIGLVGLFLRRNAIVVLMSIELMLNAVNLNFVAFSSYLG-DLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRGTI 89 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999858999999999999999999999999918-987145899999999999999999999999812877
Q ss_pred CHHHHH
Q ss_conf 012222
Q gi|254780867|r 188 GFSQIA 193 (478)
Q Consensus 188 ~~~~l~ 193 (478)
|.+++.
T Consensus 90 dvd~~~ 95 (99)
T PRK05715 90 DVDDLN 95 (99)
T ss_pred CHHHHH
T ss_conf 361796
No 115
>MTH00071 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=65.25 E-value=3.2 Score=18.55 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHH--HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 577788777766--532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 135 LELQSFALYVLI--AMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 135 ~E~~~i~~~~LI--~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
.-+.+++.|.++ ++..+++-+.-++.|-..-..--...+.+.+......+||+|+.++...-................
T Consensus 111 l~i~sl~~~~i~l~GwsSnskYs~lGa~R~~aq~iSYEv~l~l~~l~~~l~~gs~sl~~i~~~q~~~~~~~~~~~~~~i~ 190 (322)
T MTH00071 111 LALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGSFTLMNFNTTQEFMWLIIPAWPMAAMW 190 (322)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999998604598655010899987887759989999999999945887999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 12344444321100012101221
Q gi|254780867|r 213 LVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
+++...+..-.||. +|++.+|
T Consensus 191 fi~~laE~nR~PFD--l~EaEsE 211 (322)
T MTH00071 191 FISTLAETNRAPFD--LTEGESE 211 (322)
T ss_pred HHHHHHHHCCCCCC--CCCCHHH
T ss_conf 99999982899999--7753599
No 116
>PRK10133 L-fucose transporter; Provisional
Probab=57.11 E-value=11 Score=15.67 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCH
Q ss_conf 0124454435642111244211111-121577888864300232010011000026787408764550210466523211
Q gi|254780867|r 290 IRQKDLKRLMAYSSIGHAGYALIGF-STGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIF 368 (478)
Q Consensus 290 l~q~d~KrllAySsi~q~G~i~~~l-~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~ 368 (478)
++.-|.||+|...++.....++.++ ..+..+......-...++.+.+..|.. .++|++|+...
T Consensus 319 l~~~~~~~~L~~~a~~~iil~l~a~~~~g~~~~~al~lvg~f~Sim~PtIFsL----------------al~gLG~~t~~ 382 (438)
T PRK10133 319 ISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSL----------------GIKNLGQDTKY 382 (438)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH----------------HHCCCCHHHHH
T ss_conf 82578999999999999999999998288699999999999988889999999----------------96734211212
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 478999986530366500006759
Q gi|254780867|r 369 LTCALTIFLFSLAGIPPFAGFFGK 392 (478)
Q Consensus 369 ~~~~~~i~~lsl~GlPp~~GF~sK 392 (478)
.+..+..+...=+=+||.-|..+.
T Consensus 383 ~S~iLvm~IvGGAilP~l~G~laD 406 (438)
T PRK10133 383 GSSFIVMTIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 799999999732889999999998
No 117
>COG0713 NuoK NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]
Probab=56.86 E-value=11 Score=15.65 Aligned_cols=83 Identities=16% Similarity=0.287 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH---HHHCCCCC
Q ss_conf 7999999999987314610221245777887777-6653200013445555540146204679988988---53001000
Q gi|254780867|r 111 IMLMAVLGMLCMISANDMISFYMSLELQSFALYV-LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGIS---FIYGFTGC 186 (478)
Q Consensus 111 l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~-LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~---~~y~~~gs 186 (478)
-..++..|..|+..+.|.+..+...|++.-+.-. +++..+... ...+-.-+++.-.++..=--+|.. .+|...||
T Consensus 11 aa~LF~IGl~Gv~~rrN~i~~LmSiElmlNAvnl~~Va~~~y~~-~~~gQvfaifvitvAAaE~aVGLailv~~yR~~~t 89 (100)
T COG0713 11 AALLFTIGLYGLLTRRNLIVMLMSIELMLNAVNLNFVAFSSYLG-DLDGQVFAIFVITVAAAEAAVGLAILVALYRRRGT 89 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999998789999988999999999999999999999998863-65415899999999999999999999999980587
Q ss_pred CCHHHHHH
Q ss_conf 00122221
Q gi|254780867|r 187 TGFSQIAT 194 (478)
Q Consensus 187 ~~~~~l~~ 194 (478)
.|.+++.+
T Consensus 90 i~id~l~~ 97 (100)
T COG0713 90 INIDDLNE 97 (100)
T ss_pred CCCCHHHH
T ss_conf 77437877
No 118
>MTH00134 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=56.44 E-value=11 Score=15.61 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHH--HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 212457778877776--653200013445555540146204679988988530010000012222111013431000012
Q gi|254780867|r 131 FYMSLELQSFALYVL--IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVG 208 (478)
Q Consensus 131 ~~v~~E~~~i~~~~L--I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~ 208 (478)
+...+-+.+++.|.+ .++..+++-+.-++.|-..-..--...+.+.+......+||+|+++....-.+...-......
T Consensus 108 ll~~l~l~sl~~~~ill~GwsSnskys~lG~~R~~aq~ISYEv~l~l~~l~~~l~~gs~sl~~~~~~q~~~~~~~~~~~l 187 (324)
T MTH00134 108 ILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLLLPAWPL 187 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999889999898530469974411298999899876998999999999996488678999999889999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 222112344444321100012101221
Q gi|254780867|r 209 VVLILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 209 ~~ll~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
..+.+++...+..-.||. +|++.+|
T Consensus 188 ~~i~~i~~laE~~R~PFD--~~EaEsE 212 (324)
T MTH00134 188 AAMWYISTLAETNRAPFD--LTEGESE 212 (324)
T ss_pred HHHHHHHHHHHCCCCCCC--CCCCHHH
T ss_conf 999999999980899999--7632599
No 119
>CHL00015 ndhE NADH dehydrogenase subunit 4L
Probab=56.17 E-value=11 Score=15.58 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHHHHHHHC-CHHHHHHHHHHHCCCCHHHHHHHHHHH---HHHCCCCC
Q ss_conf 9999999999873146102212457778877-776653200-013445555540146204679988988---53001000
Q gi|254780867|r 112 MLMAVLGMLCMISANDMISFYMSLELQSFAL-YVLIAMNRK-SVFSIEAALKYFVLGAFSSAFLLYGIS---FIYGFTGC 186 (478)
Q Consensus 112 ~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~-~~LI~~~~~-~~~~~~aa~ky~~~~~~g~~~ll~g~~---~~y~~~gs 186 (478)
..++..|..|++...|.+..+.+.|++.-+. .-++++.+. +++..++-.-.++.-.++..=--+|.+ .+|...+|
T Consensus 11 ~~LF~iGl~Gvl~rRN~i~~LmsiELmLnavnln~vafs~~~~~~~~~Gqvf~lfii~vAAaE~AvGLAiii~~yR~~~s 90 (101)
T CHL00015 11 AYLFSIGIYGLITSRNMVRALMCLELILNAVNINLVTFSDFFDSRQLKGDIFSIFVIAIAAAEAAIGLAIVSSIYRNRKS 90 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999998999875489999999999999999999999997378898616679999999999999999999999973488
Q ss_pred CCHHHHH
Q ss_conf 0012222
Q gi|254780867|r 187 TGFSQIA 193 (478)
Q Consensus 187 ~~~~~l~ 193 (478)
.|.++..
T Consensus 91 idvd~~~ 97 (101)
T CHL00015 91 TRINQSN 97 (101)
T ss_pred CCHHHHH
T ss_conf 7664887
No 120
>MTH00111 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=50.98 E-value=7.5 Score=16.51 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHH--HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 2457778877776--65320001344555554014620467998898853001000001222211101343100001222
Q gi|254780867|r 133 MSLELQSFALYVL--IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVV 210 (478)
Q Consensus 133 v~~E~~~i~~~~L--I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ 210 (478)
..+-+.+++.|.+ .++..+++-+.-++.|-..-..-=...+.+.+......+||.|+.++...-.+............
T Consensus 109 ~~l~i~sl~~~~ill~Gw~SnskYs~iG~~R~~aq~iSYEv~l~l~~l~i~~~~gs~sl~~i~~~q~~~~~~~~~~p~~i 188 (323)
T MTH00111 109 FLLAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSVILLSGGYTLQTLATTQEPLYLIFSSWPLAM 188 (323)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999853135886550108899889988899999999999999568868889999987999999999999
Q ss_pred CCCCCCCCCCCCCCCCH
Q ss_conf 21123444443211000
Q gi|254780867|r 211 LILVGLFFKMALVPFHM 227 (478)
Q Consensus 211 ll~~g~~~K~~~fPfH~ 227 (478)
+.+++...+..-.||..
T Consensus 189 i~~i~~laE~nR~PFDl 205 (323)
T MTH00111 189 MWYISTLAETNRAPFDL 205 (323)
T ss_pred HHHHHHHHHHCCCCCCC
T ss_conf 99999999818999997
No 121
>MTH00143 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=48.11 E-value=15 Score=14.85 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=48.0
Q ss_pred HHHHHHHHH--HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 777887777--665320001344555554014620467998898853001000001222211101343100001222211
Q gi|254780867|r 136 ELQSFALYV--LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLIL 213 (478)
Q Consensus 136 E~~~i~~~~--LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~ 213 (478)
-+.+++.|. +.++..+++-+.-++.|-..-..-=...+...+......+||+|+.++.+.-...........+....+
T Consensus 108 ~l~sl~~~~~~l~Gw~S~skYs~lG~~R~~~q~iSYEi~l~l~~l~~~~~~gs~~l~~i~~~q~~~~~~~~~~~~~~~~~ 187 (306)
T MTH00143 108 CVSSLNVYGVMLAGWSSNSKYALLGAVRAVAQSISYEVSMSLILLFPLLLSGSFSFQEVSESQFSVWLGFLNFPVMLMWF 187 (306)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88888889877605668883324067599986566647799999999998077516899998888999999999999999
Q ss_pred CCCCCCCCCCCCCH
Q ss_conf 23444443211000
Q gi|254780867|r 214 VGLFFKMALVPFHM 227 (478)
Q Consensus 214 ~g~~~K~~~fPfH~ 227 (478)
+....|..--||..
T Consensus 188 i~~lae~~R~PFDl 201 (306)
T MTH00143 188 VSCLAETNRAPFDF 201 (306)
T ss_pred HHHHHHHCCCCCCC
T ss_conf 99999978899999
No 122
>COG1005 NuoH NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]
Probab=47.81 E-value=15 Score=14.82 Aligned_cols=98 Identities=12% Similarity=0.184 Sum_probs=49.0
Q ss_pred HHHHHHHHH--HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCC
Q ss_conf 777887777--6653200013445555540146204679988988530010000012222111013-4310000122221
Q gi|254780867|r 136 ELQSFALYV--LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIG-HRSFVLIVGVVLI 212 (478)
Q Consensus 136 E~~~i~~~~--LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~-~~~~~~~~~~~ll 212 (478)
-+.+++.|. +.++..|+|-+.-++.|-..-..-=...+-+++.-.-..+||+|..|+.+.-... -.-..+..+++..
T Consensus 121 a~ssl~vygii~~GwASNnKya~lGa~R~aaq~iSYEV~~~lsv~~vv~~~GSln~~~IV~~Q~~~~W~~~~~p~~Fivf 200 (332)
T COG1005 121 AISSLGVYGIILAGWASNNKYALLGALRAAAQMISYEVPLGLSVLAVVMLAGSLNLVDIVNAQSGLLWNILLQPIAFIVF 200 (332)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99988999988544541780367899999989978789999999999999478879999986356764588718999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 12344444321100012101221
Q gi|254780867|r 213 LVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
+++....+.-.||. +|++.+|
T Consensus 201 ~Ia~laet~R~PFD--l~EaE~E 221 (332)
T COG1005 201 LIAMLAETNRFPFD--LPEAESE 221 (332)
T ss_pred HHHHHHHHCCCCCC--CCCCHHH
T ss_conf 99999984899988--8754476
No 123
>MTH00159 consensus
Probab=47.67 E-value=15 Score=14.81 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHH--HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 2457778877776--65320001344555554014620467998898853001000001222211101343100001222
Q gi|254780867|r 133 MSLELQSFALYVL--IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVV 210 (478)
Q Consensus 133 v~~E~~~i~~~~L--I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ 210 (478)
...-+.+++.|.+ .++..+++-+.-++.|-..-..-=...+.+.+......+||+|+.++...-...........+..
T Consensus 103 ~~l~l~sl~~~~i~l~Gw~S~skYs~iG~~R~~~q~iSYEi~l~l~l~~~~~~~gs~~l~~i~~~q~~~~~~~~~~~~~~ 182 (307)
T MTH00159 103 FFLCCSSLGVYTILIAGWSSNSKYALLGSLRGVAQTISYEVSLALILLSFIFLIGSYNLLDFSKYQKYFWFIFFMFPLFL 182 (307)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999989830037996453368899989988889899999999999758879999999878889999999999
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 2112344444321100
Q gi|254780867|r 211 LILVGLFFKMALVPFH 226 (478)
Q Consensus 211 ll~~g~~~K~~~fPfH 226 (478)
..+++...+..-.||.
T Consensus 183 ~~~i~~laE~~R~PFD 198 (307)
T MTH00159 183 IWLVSCLAETNRTPFD 198 (307)
T ss_pred HHHHHHHHHHCCCCCC
T ss_conf 9999999996799999
No 124
>MTH00195 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=45.35 E-value=17 Score=14.61 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=47.0
Q ss_pred HHHHHHHH--HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 77887777--6653200013445555540146204679988988530010000012222111013431000012222112
Q gi|254780867|r 137 LQSFALYV--LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILV 214 (478)
Q Consensus 137 ~~~i~~~~--LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~ 214 (478)
+.+++.|. +.++..+++-+.-++.|-..-..-=...+.+.+......+||+|+.++.+.-.+.........+....++
T Consensus 110 l~sl~~~~~~l~GwsS~skys~lG~~R~~~q~iSYEi~l~l~~l~~~~~~gs~~l~~i~~~q~~~~~~~~~~~~~~i~~i 189 (307)
T MTH00195 110 VSSLSVYSTLMSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPLLLAGSFDFEIMLISQSFFWFVLLFPPISFMWYV 189 (307)
T ss_pred HHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85004553021477678822141477999887677686999999999993788799999999999999998789999999
Q ss_pred CCCCCCCCCCCCH
Q ss_conf 3444443211000
Q gi|254780867|r 215 GLFFKMALVPFHM 227 (478)
Q Consensus 215 g~~~K~~~fPfH~ 227 (478)
+...|..-.||..
T Consensus 190 ~~laE~~R~PFDl 202 (307)
T MTH00195 190 STLAETNRAPFDF 202 (307)
T ss_pred HHHHHHCCCCCCC
T ss_conf 9999968999999
No 125
>MTH00193 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=45.35 E-value=17 Score=14.61 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 4577788777766--53200013445555540146204679988988530010000012222111013431000012222
Q gi|254780867|r 134 SLELQSFALYVLI--AMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVL 211 (478)
Q Consensus 134 ~~E~~~i~~~~LI--~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~l 211 (478)
..-+.+++.|.++ ++..+++-+.-++.|-..-..-=...+.+.+......+||+|+.++...-.+.........+...
T Consensus 107 ~l~l~sl~~~~~~l~Gw~S~skYs~iG~~R~~~q~iSyEv~l~l~i~~~~~~~gs~~l~~i~~~q~~~~~~~~~~~~~~~ 186 (306)
T MTH00193 107 FLCCSSLGVYTIMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFSLFQEYIWFIFFMFPLFLI 186 (306)
T ss_pred HHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999989888772023468875627388999999998898999999999996578699999998889999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 112344444321100012101221
Q gi|254780867|r 212 ILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 212 l~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
.+++...+..-.||.. |++.+|
T Consensus 187 ~~i~~laE~~R~PFDl--~EaEsE 208 (306)
T MTH00193 187 WLVSCLAETNRTPFDF--AEGESE 208 (306)
T ss_pred HHHHHHHHHCCCCCCC--CCCCHH
T ss_conf 9999999968999998--855098
No 126
>PRK04288 antiholin-like protein LrgB; Provisional
Probab=38.18 E-value=22 Score=13.98 Aligned_cols=118 Identities=17% Similarity=0.191 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 299999999999999999998640230158999--999999999999999971322100316764100799999999999
Q gi|254780867|r 9 DLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHL--VVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMS 86 (478)
Q Consensus 9 ~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~--~~~~~~~l~i~l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~ 86 (478)
++...-|...+.+....-.......+|.+.... .......+.+........+.+.+.-+.. + +..+.
T Consensus 2 ~~~~~tP~fgl~lTl~~y~~~~~l~~k~~~~~l~nPll~~~~lii~~L~~~~i~Y~~Y~~g~~--------~---l~~lL 70 (231)
T PRK04288 2 HLSTMTPYFGILVSLIPFGIGTILFKKTNGFFLFTPLFVAMVLGIAFLKLTGISYETYKIGGD--------I---ISFFL 70 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHH--------H---HHHHH
T ss_conf 633168399999999999999999998289864178999999999999992998899971129--------9---99989
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 999999999996321002242066799999999998731461022124577
Q gi|254780867|r 87 SIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLEL 137 (478)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~ 137 (478)
+-.++.......+.++.-+++......-...|....+.+.-.+..+.+.+-
T Consensus 71 gPAtVAlAvPLY~~~~~ik~~~~~il~~~~~G~~~~i~s~~~la~~lg~~~ 121 (231)
T PRK04288 71 EPATIAFAIPLYKKRDVLKKYWWQILGAIGVGSICSLLIVYTVAKAIQLDN 121 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 999999999999839999999999999999999999999999999978899
No 127
>MTH00218 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=37.70 E-value=22 Score=13.93 Aligned_cols=93 Identities=14% Similarity=0.042 Sum_probs=49.2
Q ss_pred HHHHHHHHHH--HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 5777887777--66532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 135 LELQSFALYV--LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 135 ~E~~~i~~~~--LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
.-+.+++.|. +.++..+++-+.-++.|-..-..--...+.+.+......+||.|+.++...-...........+....
T Consensus 109 l~l~sl~~~~~~l~GwsSnSkYs~iG~~R~~aq~iSYEv~l~l~~l~~~~~~gs~~l~~i~~~q~~~~~~~~~~~~~i~~ 188 (314)
T MTH00218 109 LAISSLSVYSILGSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLVILAGGFTLSTFNYYQETIWLLGPFWPLAVMW 188 (314)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975789999987425689765641208999995676899999999999807986799999863599998788999999
Q ss_pred CCCCCCCCCCCCCCH
Q ss_conf 123444443211000
Q gi|254780867|r 213 LVGLFFKMALVPFHM 227 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~ 227 (478)
+++...+..-.||..
T Consensus 189 ~i~~laE~nR~PFDl 203 (314)
T MTH00218 189 FISTLAETNRAPFDL 203 (314)
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999999978899998
No 128
>pfam01059 Oxidored_q5_N NADH-ubiquinone oxidoreductase chain 4, amino terminus.
Probab=37.32 E-value=23 Score=13.90 Aligned_cols=53 Identities=11% Similarity=0.044 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAV 116 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~ 116 (478)
...+..+..|..|.....+..-....-...+.+....|+..++|.+.......
T Consensus 51 ~~~s~~~g~D~lS~pLi~LS~Wl~pLMilASq~~~~~e~~~~~~~Fl~~~~~L 103 (110)
T pfam01059 51 SNLSYFLGIDSLSYPLIILSCWLLPLMILASQKHLKNEPNNRQRTFIFLLILL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 15339874315528999999999999999879887149804758999999999
No 129
>MTH00104 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=36.62 E-value=23 Score=13.84 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=49.0
Q ss_pred HHHHHHHHHHH--HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 57778877776--6532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 135 LELQSFALYVL--IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 135 ~E~~~i~~~~L--I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
.-+.+++.|.+ .++..+++-+.-++.|...-..--...+.+.+......+||+|+.++...-.+..............
T Consensus 106 l~l~sl~~~~i~l~GwsS~skYs~iG~~R~~aq~iSYEv~l~l~~~~~~~~~gs~sl~~i~~~q~~~~~~~~~~~~~~i~ 185 (318)
T MTH00104 106 LAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAMMW 185 (318)
T ss_pred HHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998823551599755005989998999988999999999999836786999999887799999999999999
Q ss_pred CCCCCCCCCCCCCCH
Q ss_conf 123444443211000
Q gi|254780867|r 213 LVGLFFKMALVPFHM 227 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~ 227 (478)
+++...+..-.||..
T Consensus 186 ~i~~laE~~R~PFDl 200 (318)
T MTH00104 186 FISTLAETNRAPFDL 200 (318)
T ss_pred HHHHHHHCCCCCCCC
T ss_conf 999999808999997
No 130
>pfam11455 DUF3018 Protein of unknown function (DUF3018). This is a bacterial family of uncharacterized proteins.
Probab=35.82 E-value=10 Score=15.77 Aligned_cols=15 Identities=33% Similarity=0.902 Sum_probs=12.7
Q ss_pred CCCCCCCCHHHHHHH
Q ss_conf 443211000121012
Q gi|254780867|r 219 KMALVPFHMWIPDVY 233 (478)
Q Consensus 219 K~~~fPfH~Wlp~a~ 233 (478)
..|+=|...|+||+-
T Consensus 14 a~GLRPvqiWVPDtr 28 (65)
T pfam11455 14 AAGLRPVQIWVPDTR 28 (65)
T ss_pred HCCCCCCEEECCCCC
T ss_conf 869985123479999
No 131
>pfam07830 PP2C_C Protein serine/threonine phosphatase 2C, C-terminal domain. Protein phosphatase 2C (PP2C) is involved in regulating cellular responses to stress in various eukaryotes. It consists of two domains: an N-terminal catalytic domain and a C-terminal domain characteristic of mammalian PP2Cs. This domain consists of three antiparallel alpha helices, one of which packs against two corresponding alpha-helices of the N-terminal domain. The C-terminal domain does not seem to play a role in catalysis, but it may provide protein substrate specificity due to the cleft that is created between it and the catalytic domain.
Probab=35.05 E-value=25 Score=13.69 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 1478999986530366500006759999999996
Q gi|254780867|r 368 FLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVK 401 (478)
Q Consensus 368 ~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~ 401 (478)
+...+-.++.-.+-|+||=.|..||-.+++..++
T Consensus 47 l~~vm~~La~e~Ip~LPPGGGl~sK~~vIe~vy~ 80 (81)
T pfam07830 47 LLHVMKTLASEDIPGLPPGGGLASKRSVIEAVYN 80 (81)
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999875578999999469999999999962
No 132
>MTH00054 ND1 NADH dehydrogenase subunit 1; Provisional
Probab=34.89 E-value=25 Score=13.68 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=46.3
Q ss_pred HHHHHHHHHHH--HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 57778877776--6532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 135 LELQSFALYVL--IAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 135 ~E~~~i~~~~L--I~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
.-+.+++.|.+ .++..+++-+.-++.|-..-..-=...+.+.+......+||+|+.++...-.+.........+....
T Consensus 110 l~l~sl~~~~ill~GwsSnskYs~iG~~R~~aq~iSYEi~l~l~~~~~~l~~gs~~l~~i~~~q~~~~~~~~~~~~~ii~ 189 (321)
T MTH00054 110 FAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIWFIFPLFPAAIMF 189 (321)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998788887750013588654543358998876543999999999999823540469999875578876078899999
Q ss_pred CCCCCCCCCCCCCCH
Q ss_conf 123444443211000
Q gi|254780867|r 213 LVGLFFKMALVPFHM 227 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~ 227 (478)
++....+..-.||..
T Consensus 190 ~i~~laE~~R~PFDl 204 (321)
T MTH00054 190 FVSALAETNRVPFDL 204 (321)
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999999848899998
No 133
>PRK10369 heme lyase subunit NrfE; Provisional
Probab=26.51 E-value=35 Score=12.87 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=13.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0000124454435642111244211
Q gi|254780867|r 287 VVAIRQKDLKRLMAYSSIGHAGYAL 311 (478)
Q Consensus 287 ~~al~q~d~KrllAySsi~q~G~i~ 311 (478)
+.+.+.++.|.---++..|.-+.++
T Consensus 311 l~~~r~~~~~~~~~~~~~SRE~~ll 335 (552)
T PRK10369 311 LYGWRARDGGPAVRFSGLSREMLIL 335 (552)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 9999701236555525435899999
No 134
>TIGR03145 cyt_nit_nrfE cytochrome c nitrate reductase biogenesis protein NrfE. Members of this protein family closely resemble the CcmF protein of the CcmABCDEFGH system, or system I, for c-type cytochrome biogenesis (GenProp0678). Members are found, as a rule, next to closely related paralogs of CcmG and CcmH and always located near other genes associated with the cytochrome c nitrite reductase enzyme complex. As a rule, members are found in species that also encode bona fide members of the CcmF, CcmG, and CcmH families.
Probab=24.94 E-value=38 Score=12.70 Aligned_cols=38 Identities=8% Similarity=0.113 Sum_probs=18.5
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122210222200000124454435642111244211
Q gi|254780867|r 274 FMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYAL 311 (478)
Q Consensus 274 l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~ 311 (478)
+..+++++..--.+.+.+.+..|+---++-+|.-+.++
T Consensus 315 L~~l~~~~~~sl~l~~~r~~~~~~~~~~~~~SRE~~ll 352 (628)
T TIGR03145 315 LLLFFLLTASALTLFALKANLRQSAVRFGLFSKEGALL 352 (628)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999999999634446655304000999999
No 135
>PRK08388 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=24.64 E-value=38 Score=12.67 Aligned_cols=39 Identities=18% Similarity=0.494 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 066799999999998731461022124577788777766
Q gi|254780867|r 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLI 146 (478)
Q Consensus 108 f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI 146 (478)
|+....++..|..+++..+|++-..++..++.-+.+++.
T Consensus 6 y~~~~iL~~iGlY~~l~~~NLiKkiigl~i~~~~v~L~~ 44 (117)
T PRK08388 6 YLTAFIMIALGIYALLYKRNLIKLILALDLIDSGIHLLL 44 (117)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999961119999999999997899999
No 136
>PRK09921 permease DsdX; Provisional
Probab=24.49 E-value=39 Score=12.65 Aligned_cols=16 Identities=19% Similarity=0.166 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 2124577788777766
Q gi|254780867|r 131 FYMSLELQSFALYVLI 146 (478)
Q Consensus 131 ~~v~~E~~~i~~~~LI 146 (478)
.=+|.|..-+-.-.++
T Consensus 114 IPvF~dv~fviL~Pl~ 129 (445)
T PRK09921 114 ITLFVEVGVVLLIPLA 129 (445)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 1998873999999999
No 137
>MTH00180 ND4L NADH dehydrogenase subunit 4L; Provisional
Probab=23.30 E-value=41 Score=12.52 Aligned_cols=81 Identities=19% Similarity=0.331 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH---HHHHHCCCCCC
Q ss_conf 9999999999873-1461022124577788777766532000134455555401462046799889---88530010000
Q gi|254780867|r 112 MLMAVLGMLCMIS-ANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYG---ISFIYGFTGCT 187 (478)
Q Consensus 112 ~l~~~~g~~~~~~-s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g---~~~~y~~~gs~ 187 (478)
..++..|..|++. -.|.+......|++.++...........-+...+..-.++.-.++..=--.| .+..|...||.
T Consensus 10 ~~LF~iG~~Gi~lnRkNiii~LmsiELMLlavnlnfv~fs~~l~d~~Gqif~lfiltvAAAEsaIGLAIlV~~yR~rgsI 89 (99)
T MTH00180 10 IILFILGVLGIVLNRSNLIIMLMSIELMLLAISFLFLINSVVIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTI 89 (99)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999988887503233999999999999999999999999933301499999999999999999999999999703741
Q ss_pred CHHHH
Q ss_conf 01222
Q gi|254780867|r 188 GFSQI 192 (478)
Q Consensus 188 ~~~~l 192 (478)
+.+++
T Consensus 90 ~v~~l 94 (99)
T MTH00180 90 AVKSL 94 (99)
T ss_pred EHHHH
T ss_conf 28577
No 138
>pfam02447 GntP_permease GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU a low affinity transporter and GntT, a high affinity transporter.
Probab=21.99 E-value=43 Score=12.38 Aligned_cols=23 Identities=9% Similarity=0.193 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41007999999999999999999
Q gi|254780867|r 71 ISDRFSYFIKAILLMSSIIIFIK 93 (478)
Q Consensus 71 ~~D~~s~~~~~l~~~~~l~~~~~ 93 (478)
..+.++..+..+-.+..+.+++.
T Consensus 50 i~~GfG~tlg~igivI~lG~iiG 72 (441)
T pfam02447 50 IEAGFGGTLGSLAIIIGLGAMLG 72 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99989899899999999999999
No 139
>pfam08690 GET2 GET complex subunit GET2. This family corresponds to the GET complex subunit GET2. The GET complex is involved in the retrieval of ER resident proteins from the Golgi.
Probab=20.60 E-value=46 Score=12.21 Aligned_cols=24 Identities=8% Similarity=0.426 Sum_probs=20.1
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 314610221245777887777665
Q gi|254780867|r 124 SANDMISFYMSLELQSFALYVLIA 147 (478)
Q Consensus 124 ~s~~l~~~~v~~E~~~i~~~~LI~ 147 (478)
-..|+++.|..+|++.+++|..+.
T Consensus 207 ~~~~FF~iFaT~Evv~~s~yy~l~ 230 (298)
T pfam08690 207 PPSNFFTIFTTFEVVIISIYYQLL 230 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 614799999999999999999998
Done!