HHsearch alignment for GI: 254780868 and conserved domain: pfam04017
>pfam04017 DUF366 Domain of unknown function (DUF366). Archaeal domain of unknown function.
Probab=90.58 E-value=0.63 Score=25.32 Aligned_cols=91 Identities=16% Similarity=0.263 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 13779999999999744542102462146506710221122223323225832676521544444642233653210023
Q gi|254780868|r 84 LSFAIAVAMRSVIASTLPVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPVDTPYPVTSLQRE 163 (252)
Q Consensus 84 l~~~~~~ai~~~l~~~~~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~~~~~~~tsL~~~ 163 (252)
T Consensus 83 rQRLl~~i~~evl~~~---g~~~~-r~GDDlyv~~~KlSVSIA~-----~s~vs~kiH~GINV~~--~g~PV~aigL~dl 151 (183)
T pfam04017 83 RQRLLVAIAKEVLEDY---GVKLT-RDGDDLYVNGKKLSVSIAT-----ASPVSMKIHFGINVTS--EGTPVPAIGLEDL 151 (183)
T ss_pred HHHHHHHHHHHHHHHC---CCCCE-ECCCEEEECCCEEEEEEEE-----CCCCCEEEEEEEEECC--CCCCCCCCCHHHC
T ss_conf 9999999999999972---98606-5578168759678999996-----4887158998787604--6656541028773
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67789789998777999999998
Q gi|254780868|r 164 GGCIDLKDIFSLLFQDVARVLDL 186 (252)
Q Consensus 164 ~~~~~~~~l~~~l~~~l~~~~~~ 186 (252)
T Consensus 152 g~~-~~~~~m~~i~~~y~~E~~~ 173 (183)
T pfam04017 152 GID-DIKELMEDIASAYVEEIEK 173 (183)
T ss_pred CCC-CHHHHHHHHHHHHHHHHHH
T ss_conf 875-5999999999999999999