HHsearch alignment of GI: 254780868 and MMDB domain: 2c8m_A_
>2c8m_A (A:) Lipoate-protein ligase A; lipoylation; HET: LPA; 1.89A {Thermoplasma acidophilum}
Probab=96.98 E-value=0.0042 Score=38.48 Aligned_cols=139 Identities=16% Similarity=0.076 Sum_probs=85.0
Q ss_pred CCCEEEEECCCCC-----------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9978999824467-----------------83679985316633334132235322400021013779999999999744
Q gi|254780868|r 38 LGNLWIVASCQTA-----------------GRGRRDNKWISDKGNLYASLLLIDSISKDSLTLLSFAIAVAMRSVIASTL 100 (252)
Q Consensus 38 ~~~~~v~A~~Qt~-----------------GrGr~gr~W~s~~G~l~~S~~~~~~~~~~~~~~l~~~~~~ai~~~l~~~~ 100 (252)
.++++++-..|.. =|.+.|..=+-.+|+|.+|++++.+... ....--.++-++.++|+++
T Consensus 41 ~~p~v~iG~~q~~~~ev~~~~~~~~~i~vvrR~tGGg~v~hd~G~l~~s~i~~~~~~~--~~~~y~~~~~~i~~~l~~~- 117 (262)
T 2c8m_A 41 HDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMD--ITSMFRTMNEAVVNSLRIL- 117 (262)
T ss_dssp CSSEEEECTTCCHHHHSCHHHHHHTTCEEEECSSCSCCEEECTTEEEEEEEEECSSCC--HHHHHHHHHHHHHHHHHHT-
T ss_pred CCCEEEECCCCCHHHHHCHHHHHHCCCCEEEEECCCCEEEECCCCEEEEEEECCCCCC--HHHHHHHHHHHHHHHHHHC-
T ss_conf 7997998978980355498999867983899836996499889981899997058999--9999999999999999973-
Q ss_pred CCCCEEEEEE----------CCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC-----------CC-CCCC
Q ss_conf 5421024621----------465067102211222233232258326765215444446422-----------33-6532
Q gi|254780868|r 101 PVGTDVKIKW----------PNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPVD-----------TP-YPVT 158 (252)
Q Consensus 101 ~~~~~~~iKW----------PNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~~-----------~~-~~~t 158 (252)
|.+....- +||+.+++|||+|.=.-.. . ..++.+.-||++...+. +. ...+
T Consensus 118 --Gi~~~~~~~~~~~~~~~~~~di~~~gkKi~G~a~~~~---~--~~~l~~~tll~~~d~~~~~~~l~~~~~~~~~~~~~ 190 (262)
T 2c8m_A 118 --GLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMR---K--GAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAK 190 (262)
T ss_dssp --TCCCEECCBCCTTSSSSBTTSEEETTEEEEEEEEEEE---T--TEEEEEEEEESSCCHHHHHHHTC------------
T ss_pred --CCEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEEEE---C--CEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf --9515885858807845677765568706875302543---8--88999866114799999998758896444222344
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1002------367789789998777999999998
Q gi|254780868|r 159 SLQR------EGGCIDLKDIFSLLFQDVARVLDL 186 (252)
Q Consensus 159 sL~~------~~~~~~~~~l~~~l~~~l~~~~~~ 186 (252)
++.. ....++++++...+.+.+.+.+..
T Consensus 191 s~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (262)
T 2c8m_A 191 STRERVANVTDFVDVSIDEVRNALIRGFSETLHI 224 (262)
T ss_dssp ---CCBCCGGGTSCCCHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 3465333687718989999999999999998589