HHsearch results for GI: 254780868 and protein with PDBid: 1bia_A
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=100.00 E-value=0 Score=407.24 Aligned_cols=236 Identities=28% Similarity=0.421 Sum_probs=211.4
Q ss_pred CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHCCCHHHHH
Q ss_conf 9997049998164856899999997399997899982446783679985316633-334132235322400021013779
Q gi|254780868|r 10 NPYSFRYEFFDTISSTNDECMKRALSGDLGNLWIVASCQTAGRGRRDNKWISDKG-NLYASLLLIDSISKDSLTLLSFAI 88 (252)
Q Consensus 10 ~p~~~~i~~~~~~~STn~~~~~~~~~~~~~~~~v~A~~Qt~GrGr~gr~W~s~~G-~l~~S~~~~~~~~~~~~~~l~~~~ 88 (252)
...++++++|+++||||++|++++.++ +++++|+|++||+||||+||+|+||+| +||||++++++.++..++.+++++
T Consensus 75 ~~~~~~i~~~~~idSTN~~a~~~~~~~-~~g~vviA~~QT~GRGR~GR~W~Sp~g~~l~~S~~l~~~~~~~~~~~lsl~~ 153 (321)
T 1bia_A 75 QLDGGSVAVLPVIDSTNQYLLDRIGEL-KSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVI 153 (321)
T ss_dssp TCCSSCEEECSSBSCHHHHHHTTGGGC-CTTCEEEESCBTTC---------CCTTSEEEEEEEEEECC-CCCTHHHHHHH
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCC-CCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 357974999803682899999875068-9980999897688879998970689999889999826753644668889999
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC--CCCCCCC-CCCCCCC
Q ss_conf 999999999744542102462146506710221122223323225832676521544444642--2336532-1002367
Q gi|254780868|r 89 AVAMRSVIASTLPVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPV--DTPYPVT-SLQREGG 165 (252)
Q Consensus 89 ~~ai~~~l~~~~~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~--~~~~~~t-sL~~~~~ 165 (252)
|+|++++++++.. .+++||||||||+++||+||||+|+....+...+++||||+|++..+. +....++ ++.+.+.
T Consensus 154 ~~av~~al~~~~~--~~v~iKWPNDI~~~~kKi~GIL~E~~~~~~~~~~~viGiGiN~~~~~~~~~~~~~~~s~~~~~~~ 231 (321)
T 1bia_A 154 GIVMAEVLRKLGA--DKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGI 231 (321)
T ss_dssp HHHHHHHHHHTTC--TTCEEETTTEEEETTEEEEEEEEEEEC----CEEEEEEEEEECCC-----------CCCTTTTTC
T ss_pred HHHHHHHHHHHCC--CEEEEECCCCHHHCCCCHHEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 9999999998366--51676369733001101123433322035520379999765335677853310134577876276
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEECCCCCEEEECCCCCEEEE
Q ss_conf 78978999877799999999873035564889999987523897799997993899999987698748999699989999
Q gi|254780868|r 166 CIDLKDIFSLLFQDVARVLDLWKKDTGREEIMNLWRCFACGIGDLITIKLSYGSILGRFVGVDDFGYLLLEEKKGCVRQI 245 (252)
Q Consensus 166 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~gk~V~i~~~~~~~~G~~~gId~~G~L~i~~~~G~~~~i 245 (252)
.++++++++.++.++..++..|.+ .+|++++++|++++.++||.|++..+++.++|++.|||++|+|+|++ +|.++.+
T Consensus 232 ~~~r~~l~~~ll~~l~~~~~~~~~-~g~~~~~~~~~~~~~~~gk~V~v~~~~~~~~G~~~gId~~G~Liv~~-~g~~~~i 309 (321)
T 1bia_A 232 NLDRNTLAAMLIRELRAALELFEQ-EGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQ-DGIIKPW 309 (321)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH-HTTGGGHHHHHHHBTTTTSEEEEEETTEEEEEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEE-CCEEEEE
T ss_conf 547677999999999999999986-59699999999863324986999979979999999999898599999-9909999
Q ss_pred EEEEE
Q ss_conf 96311
Q gi|254780868|r 246 FTGDI 250 (252)
Q Consensus 246 ~sGeI 250 (252)
++|||
T Consensus 310 ~sGeV 314 (321)
T 1bia_A 310 MGGEI 314 (321)
T ss_dssp SSCEE
T ss_pred EEEEE
T ss_conf 97799