HHsearch results for GI: 254780868 and protein with PDBid: 1bia_A

>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=100.00  E-value=0  Score=407.24  Aligned_cols=236  Identities=28%  Similarity=0.421  Sum_probs=211.4

Q ss_pred             CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHCCCHHHHH
Q ss_conf             9997049998164856899999997399997899982446783679985316633-334132235322400021013779
Q gi|254780868|r   10 NPYSFRYEFFDTISSTNDECMKRALSGDLGNLWIVASCQTAGRGRRDNKWISDKG-NLYASLLLIDSISKDSLTLLSFAI   88 (252)
Q Consensus        10 ~p~~~~i~~~~~~~STn~~~~~~~~~~~~~~~~v~A~~Qt~GrGr~gr~W~s~~G-~l~~S~~~~~~~~~~~~~~l~~~~   88 (252)
                      ...++++++|+++||||++|++++.++ +++++|+|++||+||||+||+|+||+| +||||++++++.++..++.+++++
T Consensus        75 ~~~~~~i~~~~~idSTN~~a~~~~~~~-~~g~vviA~~QT~GRGR~GR~W~Sp~g~~l~~S~~l~~~~~~~~~~~lsl~~  153 (321)
T 1bia_A           75 QLDGGSVAVLPVIDSTNQYLLDRIGEL-KSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVI  153 (321)
T ss_dssp             TCCSSCEEECSSBSCHHHHHHTTGGGC-CTTCEEEESCBTTC---------CCTTSEEEEEEEEEECC-CCCTHHHHHHH
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHCC-CCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf             357974999803682899999875068-9980999897688879998970689999889999826753644668889999


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC--CCCCCCC-CCCCCCC
Q ss_conf             999999999744542102462146506710221122223323225832676521544444642--2336532-1002367
Q gi|254780868|r   89 AVAMRSVIASTLPVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPV--DTPYPVT-SLQREGG  165 (252)
Q Consensus        89 ~~ai~~~l~~~~~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~--~~~~~~t-sL~~~~~  165 (252)
                      |+|++++++++..  .+++||||||||+++||+||||+|+....+...+++||||+|++..+.  +....++ ++.+.+.
T Consensus       154 ~~av~~al~~~~~--~~v~iKWPNDI~~~~kKi~GIL~E~~~~~~~~~~~viGiGiN~~~~~~~~~~~~~~~s~~~~~~~  231 (321)
T 1bia_A          154 GIVMAEVLRKLGA--DKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGI  231 (321)
T ss_dssp             HHHHHHHHHHTTC--TTCEEETTTEEEETTEEEEEEEEEEEC----CEEEEEEEEEECCC-----------CCCTTTTTC
T ss_pred             HHHHHHHHHHHCC--CEEEEECCCCHHHCCCCHHEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             9999999998366--51676369733001101123433322035520379999765335677853310134577876276


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEECCCCCEEEECCCCCEEEE
Q ss_conf             78978999877799999999873035564889999987523897799997993899999987698748999699989999
Q gi|254780868|r  166 CIDLKDIFSLLFQDVARVLDLWKKDTGREEIMNLWRCFACGIGDLITIKLSYGSILGRFVGVDDFGYLLLEEKKGCVRQI  245 (252)
Q Consensus       166 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~gk~V~i~~~~~~~~G~~~gId~~G~L~i~~~~G~~~~i  245 (252)
                      .++++++++.++.++..++..|.+ .+|++++++|++++.++||.|++..+++.++|++.|||++|+|+|++ +|.++.+
T Consensus       232 ~~~r~~l~~~ll~~l~~~~~~~~~-~g~~~~~~~~~~~~~~~gk~V~v~~~~~~~~G~~~gId~~G~Liv~~-~g~~~~i  309 (321)
T 1bia_A          232 NLDRNTLAAMLIRELRAALELFEQ-EGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQ-DGIIKPW  309 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHH-HTTGGGHHHHHHHBTTTTSEEEEEETTEEEEEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEE-CCEEEEE
T ss_conf             547677999999999999999986-59699999999863324986999979979999999999898599999-9909999


Q ss_pred             EEEEE
Q ss_conf             96311
Q gi|254780868|r  246 FTGDI  250 (252)
Q Consensus       246 ~sGeI  250 (252)
                      ++|||
T Consensus       310 ~sGeV  314 (321)
T 1bia_A          310 MGGEI  314 (321)
T ss_dssp             SSCEE
T ss_pred             EEEEE
T ss_conf             97799