HHsearch alignment for GI: 254780869 and conserved domain: COG0426

>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion].
Probab=99.11  E-value=1.6e-09  Score=87.54  Aligned_cols=305  Identities=20%  Similarity=0.227  Sum_probs=162.7

Q ss_pred             CCCEEEEEEECCCCCCEEEEEECCC-CCCCCCCCCEEEECCCHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHC-C
Q ss_conf             4660699995177786489997767-67888767502870795798766--412468996054301216078889862-9
Q gi|254780869|r   17 IGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFL-H   92 (559)
Q Consensus        17 iG~N~~~~~~~~~~~~~~iiiD~G~-~fp~~~~~gid~iiPd~~~l~~~--~~~i~~i~iTH~H~DHiGalp~l~~~~-~   92 (559)
T Consensus        34 ttyNSYLI~-----~~k~aLID~~~~~f~~-------~~---l~~l~~~id~k~iDYIi~~H~ePDhsg~l~~ll~~~p~   98 (388)
T COG0426          34 TTYNSYLIV-----GDKTALIDTVGEKFFD-------EY---LENLSKYIDPKEIDYIIVNHTEPDHSGSLPELLELAPN   98 (388)
T ss_pred             CEEEEEEEE-----CCCEEEECCCCCCHHH-------HH---HHHHHHHCCHHCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf             144558996-----7967998899801699-------99---99998634800171999788896335469999986889


Q ss_pred             CCEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEECC--CCCCCCCEEEEEECCCEEEECCCC----
Q ss_conf             97792999999999999854886556225517555577634899998556--777765356798768179983340----
Q gi|254780869|r   93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN--HSIPETMALVIRSPVGNIVHTGDW----  166 (559)
Q Consensus        93 ~pIY~s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~v~~~~~~--Hsip~a~~~~I~t~~g~i~ytGDf----  166 (559)
T Consensus        99 a~ii~s~~~~~~L~~~~~~----~~~-~~ivk~Gd~ldlGg~tL~Fi~ap~LHW-Pd~m~TY--d~~~kILFS~D~fG~h  170 (388)
T COG0426          99 AKIICSKLAARFLKGFYHD----PEW-FKIVKTGDTLDLGGHTLKFIPAPFLHW-PDTMFTY--DPEDKILFSCDAFGAH  170 (388)
T ss_pred             CEEEEEHHHHHHHHHHCCC----CCC-EEECCCCCEECCCCCEEEEEECCCCCC-CCCEEEE--ECCCCEEECCCCCCCC
T ss_conf             7899638999999974488----541-363478877644894799995787779-8733676--2477577714656642


Q ss_pred             -----EECCCCCCCCCCCHHHHHHCCCCCCEEEEE---------------CCC--CCCCCCCCCC--HHHHHHHHHHHHH
Q ss_conf             -----246776654238988998608788299996---------------356--4578887777--8799999999986
Q gi|254780869|r  167 -----KLDDDAILGDVTDKDSLCAIGNEGILALMC---------------DST--NAMREGTCIS--EKGIKKNIYDIMK  222 (559)
Q Consensus       167 -----k~d~~p~~g~~~d~~~l~~~~~~gv~~Li~---------------esT--~~~~~~~~~s--E~~v~~~i~~~~~  222 (559)
T Consensus       171 ~~~~~~fded--------~~~~~~~~~~Y~~~lm~p~~~~v~~~l~~~~~l~i~~IaP~HG~i~~~~~~~i~~~Y~~W~~  242 (388)
T COG0426         171 VCDDYRFDED--------IEELLPDMRKYYANLMAPNARLVLWALKKIKLLKIEMIAPSHGPIWRGNPKEIVEAYRDWAE  242 (388)
T ss_pred             CCCHHCCCCC--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCEEECCHHHHHHHHHHHHC
T ss_conf             4652112467--------99987989999999605217999999854054674189759985255798999999999970


Q ss_pred             HC-CCCEEE---EECHHHHHH-HHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHH-HCCCCCCCEEE
Q ss_conf             27-983999---941477899-9999999987188699844869999998874287677654226566-22388020899
Q gi|254780869|r  223 NA-KGCVLV---TTFSSSVSR-IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIV  296 (559)
Q Consensus       223 ~~-~grViv---~~fasni~R-i~~i~~~a~~~~R~v~i~Grs~~~~~~~a~~~g~l~~~~~~i~~~~-~~~~p~~~~~i  296 (559)
T Consensus       243 ~~~~~~V~l~Y~smyg-~T~~ma~aiaegl~~~gv~v~~~~---------------~~~~----~~~eI~~~i~~a~~~v  302 (388)
T COG0426         243 GQPKGKVDLIYDSMYG-NTEKMAQAIAEGLMKEGVDVEVIN---------------LEDA----DPSEIVEEILDAKGLV  302 (388)
T ss_pred             CCCCCEEEEEEECCCC-CHHHHHHHHHHHHHHCCCCEEEEE---------------CCCC----CHHHHHHHHHHCCEEE
T ss_conf             6876617999842237-879999999877611599629999---------------1558----8999999987537799


Q ss_pred             EEECCC-CCH----HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCC
Q ss_conf             996696-326----889885202777653026896699996158861778999997651031134303566641315788
Q gi|254780869|r  297 IATGSQ-GEP----RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP  371 (559)
Q Consensus       297 i~TGsq-ge~----~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGnE~~~~~~~n~l~~~g~~vi~~~~~~~iH~SGHa  371 (559)
T Consensus       303 vGsPT~~~~~~p~i~~~l~~v~~-----~~~~~k~~~vfgS~GW~--g~av~~i~~~l~~~g~~~~~~----~i~vk~~P  371 (388)
T COG0426         303 VGSPTINGGAHPPIQTALGYVLA-----LAPKNKLAGVFGSYGWS--GEAVDLIEEKLKDLGFEFGFD----GIEVKFRP  371 (388)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHH-----CCCCCCEEEEEECCCCC--CCCHHHHHHHHHHCCCEEECC----CEEEEECC
T ss_conf             95686468879219999999974-----35878559999647878--750789999998659678524----16998437


Q ss_pred             CHHHHHHHHHHC
Q ss_conf             978999999754
Q gi|254780869|r  372 YPNDLKRMYQWI  383 (559)
Q Consensus       372 ~~edl~~li~~i  383 (559)
T Consensus       372 ~~~~l~~c~e~g  383 (388)
T COG0426         372 TEEDLKKCEEAG  383 (388)
T ss_pred             CHHHHHHHHHHH
T ss_conf             889999999999