HHsearch alignment for GI: 254780869 and conserved domain: COG1782
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only].
Probab=100.00 E-value=1e-39 Score=304.70 Aligned_cols=391 Identities=25% Similarity=0.366 Sum_probs=266.0
Q ss_pred CCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC---CCCCCEEEECCCHHHHHHHHHCCCEEEEECCCC
Q ss_conf 88639999406868346606999951777864899977676788---876750287079579876641246899605430
Q gi|254780869|r 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 (559)
Q Consensus 2 ~~~~i~~~~lGG~~eiG~N~~~~~~~~~~~~~~iiiD~G~~fp~---~~~~gid~iiPd~~~l~~~~~~i~~i~iTH~H~ 78 (559)
T Consensus 177 ~~~wvRvt~LGg~~EVGRSa~lv~T----~eSrVLlDcG~n~a~~~~~~~Pyl~--vpE~~~-----~~lDAViiTHAHL 245 (637)
T COG1782 177 KDRWVRVTALGGFREVGRSALLVST----PESRVLLDCGVNVAGNGEDAFPYLD--VPEFQP-----DELDAVIITHAHL 245 (637)
T ss_pred CCCEEEEEEECCCHHCCCEEEEEEC----CCCEEEEECCCCCCCCCCCCCCCCC--CCCCCC-----CCCCEEEEEECCC
T ss_conf 6745999961241120625699736----8833899636567788643574455--610251-----2053699850234
Q ss_pred CCCCCHHHHHHH-CCCCEECCHHHHHHHHHH-------HHHCCCCCCC----------CEEEECCCCEEEEC-CEEEEEE
Q ss_conf 121607888986-299779299999999999-------9854886556----------22551755557763-4899998
Q gi|254780869|r 79 DHYGALHDLWSF-LHVPVYASPFAIGLLEAK-------RVYERVSKKI----------PCISFQAGDKVDVG-AFSIESV 139 (559)
Q Consensus 79 DHiGalp~l~~~-~~~pIY~s~~t~~li~~~-------~~~~~~~~~~----------~~~~i~~~~~~~~g-~~~v~~~ 139 (559)
T Consensus 246 DH~G~lP~LfkYgy~GPVY~T~PTRDlm~LLq~Dyi~va~keg~~ppY~~k~v~~~lkhtItldYgevTDIaPDirLTf~ 325 (637)
T COG1782 246 DHCGFLPLLFKYGYDGPVYCTPPTRDLMVLLQLDYIEVAEKEGGEPPYESKDVRKVLKHTITLDYGEVTDIAPDIRLTFY 325 (637)
T ss_pred CCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCEEEEE
T ss_conf 43452145665178887431797188999998879999996499999887899988754541025762446876178984
Q ss_pred ECCCCCCCCCEEEEEECCC--EEEECCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 5567777653567987681--79983340246776654238988998608788299996356457888777787999999
Q gi|254780869|r 140 RVNHSIPETMALVIRSPVG--NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 (559)
Q Consensus 140 ~~~Hsip~a~~~~I~t~~g--~i~ytGDfk~d~~p~~g~~~d~~~l~~~~~~gv~~Li~esT~~~~~~~~~sE~~v~~~i 217 (559)
T Consensus 326 NAGH-ILGSA~~HlHIGdGlyNi~yTGDfk~~~trLl~~A~--n~FpR-----vEtlimEsTYGg~~d~q~~R~eaE~~L 397 (637)
T COG1782 326 NAGH-ILGSAMAHLHIGDGLYNIVYTGDFKFEKTRLLEPAN--NKFPR-----VETLIMESTYGGRDDVQPPREEAEKEL 397 (637)
T ss_pred CCCC-HHCCEEEEEEECCCCEEEEEECCCCCCCEECCCHHH--CCCCC-----HHEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 1641-013101588864871357994344444012057333--36832-----320465301377544577678999999
Q ss_pred HHHHHHC---CCCEEEEECHHHHHHHHHHHHHHHHHCC-------EEEEECHHHHH-HHHHH------HHC--CCCC-CC
Q ss_conf 9998627---9839999414778999999999987188-------69984486999-99988------742--8767-76
Q gi|254780869|r 218 YDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGR-------KIVLLGSSLKR-VVSVA------IDV--GIIK-KD 277 (559)
Q Consensus 218 ~~~~~~~---~grViv~~fasni~Ri~~i~~~a~~~~R-------~v~i~Grs~~~-~~~~a------~~~--g~l~-~~ 277 (559)
T Consensus 398 ~~vi~~t~~rGGKvLIP~fA--VGR~QEvM~VLee~mr~g~ipe~PVYlDGMI~EatAIhtaYPEyL~~~lr~~I~~~g~ 475 (637)
T COG1782 398 IKVINDTLKRGGKVLIPVFA--VGRSQEVMIVLEEAMRKGLIPEVPVYLDGMIWEATAIHTAYPEYLNKELRERIFHEGE 475 (637)
T ss_pred HHHHHHHHHCCCEEEEEEEE--CCCCCEEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCC
T ss_conf 99999987369769987652--2664010677999985398886645662133023567530877666889999860799
Q ss_pred CCCCC----------HHHHCCCCCCCEEEEEECCC---CCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCH-HHHHH
Q ss_conf 54226----------56622388020899996696---326889885202777653026896699996158861-77899
Q gi|254780869|r 278 QLFLS----------DESFGLYPREQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIG 343 (559)
Q Consensus 278 ~~~i~----------~~~~~~~p~~~~~ii~TGsq---ge~~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGn-E~~~~ 343 (559)
T Consensus 476 NPF~se~f~~V~~~~~r~~i~~~~ep~iIlaTSGMlnGGPvveyfk~lA~D--------prntliFVgYQAeGTLGRriq 547 (637)
T COG1782 476 NPFLSEIFKRVEGSDERQEIIESDEPAIILATSGMLNGGPVVEYFKHLAPD--------PKNTLIFVGYQAEGTLGRRIQ 547 (637)
T ss_pred CCCCCCCEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCC--------CCCEEEEEEECCCCCHHHHHH
T ss_conf 975313015457715788875489973999446654688289999984789--------876289998204763204664
Q ss_pred HHHHH---HHCCC-EEEEECCCCCCEE----CCCCCCHHHHHHHHHHCC--CCEEEEECCCHHHHHHHHHHHHHCCC-CC
Q ss_conf 99976---51031-1343035666413----157889789999997549--53999704577999999987874478-63
Q gi|254780869|r 344 HIKNR---LVEQG-VRVIAEDAECPVH----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGI-AC 412 (559)
Q Consensus 344 ~~~n~---l~~~g-~~vi~~~~~~~iH----~SGHa~~edl~~li~~ik--Pk~~IPvHGe~rhl~~h~~la~~~gv-~~ 412 (559)
T Consensus 548 ~G~kEipi~~~~G~te~i~--inMeV~tieGFSGHsdrrqL~~yvr~~~PkP~ki~~~HGe~sk~~~lA~si~~-~~~i~ 624 (637)
T COG1782 548 SGAKEIPIPGEDGKTEVIK--VNMEVETIEGFSGHSDRRQLMKYVRRMNPKPEKILLNHGEPSKCLDLASSIRR-KFKIE 624 (637)
T ss_pred CCCEECCCCCCCCCEEEEE--EEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH-HHCEE
T ss_conf 4760232226899769999--76789984575777548999999986499985357646986789999999986-50515
Q ss_pred EEEECCCEEEEE
Q ss_conf 155003227897
Q gi|254780869|r 413 VPPVRNGKMLRL 424 (559)
Q Consensus 413 i~l~~NGd~i~l 424 (559)
T Consensus 625 t~ap~nLetiR~ 636 (637)
T COG1782 625 TYAPKNLETIRL 636 (637)
T ss_pred EECCCCCCCEEC
T ss_conf 664654010642