HHsearch alignment for GI: 254780869 and conserved domain: COG1782

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only].
Probab=100.00  E-value=1e-39  Score=304.70  Aligned_cols=391  Identities=25%  Similarity=0.366  Sum_probs=266.0

Q ss_pred             CCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC---CCCCCEEEECCCHHHHHHHHHCCCEEEEECCCC
Q ss_conf             88639999406868346606999951777864899977676788---876750287079579876641246899605430
Q gi|254780869|r    2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGVDLVFPDITFIMKERKNLMAIFITHAHE   78 (559)
Q Consensus         2 ~~~~i~~~~lGG~~eiG~N~~~~~~~~~~~~~~iiiD~G~~fp~---~~~~gid~iiPd~~~l~~~~~~i~~i~iTH~H~   78 (559)
T Consensus       177 ~~~wvRvt~LGg~~EVGRSa~lv~T----~eSrVLlDcG~n~a~~~~~~~Pyl~--vpE~~~-----~~lDAViiTHAHL  245 (637)
T COG1782         177 KDRWVRVTALGGFREVGRSALLVST----PESRVLLDCGVNVAGNGEDAFPYLD--VPEFQP-----DELDAVIITHAHL  245 (637)
T ss_pred             CCCEEEEEEECCCHHCCCEEEEEEC----CCCEEEEECCCCCCCCCCCCCCCCC--CCCCCC-----CCCCEEEEEECCC
T ss_conf             6745999961241120625699736----8833899636567788643574455--610251-----2053699850234


Q ss_pred             CCCCCHHHHHHH-CCCCEECCHHHHHHHHHH-------HHHCCCCCCC----------CEEEECCCCEEEEC-CEEEEEE
Q ss_conf             121607888986-299779299999999999-------9854886556----------22551755557763-4899998
Q gi|254780869|r   79 DHYGALHDLWSF-LHVPVYASPFAIGLLEAK-------RVYERVSKKI----------PCISFQAGDKVDVG-AFSIESV  139 (559)
Q Consensus        79 DHiGalp~l~~~-~~~pIY~s~~t~~li~~~-------~~~~~~~~~~----------~~~~i~~~~~~~~g-~~~v~~~  139 (559)
T Consensus       246 DH~G~lP~LfkYgy~GPVY~T~PTRDlm~LLq~Dyi~va~keg~~ppY~~k~v~~~lkhtItldYgevTDIaPDirLTf~  325 (637)
T COG1782         246 DHCGFLPLLFKYGYDGPVYCTPPTRDLMVLLQLDYIEVAEKEGGEPPYESKDVRKVLKHTITLDYGEVTDIAPDIRLTFY  325 (637)
T ss_pred             CCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCEEEEE
T ss_conf             43452145665178887431797188999998879999996499999887899988754541025762446876178984


Q ss_pred             ECCCCCCCCCEEEEEECCC--EEEECCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf             5567777653567987681--79983340246776654238988998608788299996356457888777787999999
Q gi|254780869|r  140 RVNHSIPETMALVIRSPVG--NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI  217 (559)
Q Consensus       140 ~~~Hsip~a~~~~I~t~~g--~i~ytGDfk~d~~p~~g~~~d~~~l~~~~~~gv~~Li~esT~~~~~~~~~sE~~v~~~i  217 (559)
T Consensus       326 NAGH-ILGSA~~HlHIGdGlyNi~yTGDfk~~~trLl~~A~--n~FpR-----vEtlimEsTYGg~~d~q~~R~eaE~~L  397 (637)
T COG1782         326 NAGH-ILGSAMAHLHIGDGLYNIVYTGDFKFEKTRLLEPAN--NKFPR-----VETLIMESTYGGRDDVQPPREEAEKEL  397 (637)
T ss_pred             CCCC-HHCCEEEEEEECCCCEEEEEECCCCCCCEECCCHHH--CCCCC-----HHEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf             1641-013101588864871357994344444012057333--36832-----320465301377544577678999999


Q ss_pred             HHHHHHC---CCCEEEEECHHHHHHHHHHHHHHHHHCC-------EEEEECHHHHH-HHHHH------HHC--CCCC-CC
Q ss_conf             9998627---9839999414778999999999987188-------69984486999-99988------742--8767-76
Q gi|254780869|r  218 YDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGR-------KIVLLGSSLKR-VVSVA------IDV--GIIK-KD  277 (559)
Q Consensus       218 ~~~~~~~---~grViv~~fasni~Ri~~i~~~a~~~~R-------~v~i~Grs~~~-~~~~a------~~~--g~l~-~~  277 (559)
T Consensus       398 ~~vi~~t~~rGGKvLIP~fA--VGR~QEvM~VLee~mr~g~ipe~PVYlDGMI~EatAIhtaYPEyL~~~lr~~I~~~g~  475 (637)
T COG1782         398 IKVINDTLKRGGKVLIPVFA--VGRSQEVMIVLEEAMRKGLIPEVPVYLDGMIWEATAIHTAYPEYLNKELRERIFHEGE  475 (637)
T ss_pred             HHHHHHHHHCCCEEEEEEEE--CCCCCEEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCC
T ss_conf             99999987369769987652--2664010677999985398886645662133023567530877666889999860799


Q ss_pred             CCCCC----------HHHHCCCCCCCEEEEEECCC---CCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCH-HHHHH
Q ss_conf             54226----------56622388020899996696---326889885202777653026896699996158861-77899
Q gi|254780869|r  278 QLFLS----------DESFGLYPREQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIG  343 (559)
Q Consensus       278 ~~~i~----------~~~~~~~p~~~~~ii~TGsq---ge~~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGn-E~~~~  343 (559)
T Consensus       476 NPF~se~f~~V~~~~~r~~i~~~~ep~iIlaTSGMlnGGPvveyfk~lA~D--------prntliFVgYQAeGTLGRriq  547 (637)
T COG1782         476 NPFLSEIFKRVEGSDERQEIIESDEPAIILATSGMLNGGPVVEYFKHLAPD--------PKNTLIFVGYQAEGTLGRRIQ  547 (637)
T ss_pred             CCCCCCCEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCC--------CCCEEEEEEECCCCCHHHHHH
T ss_conf             975313015457715788875489973999446654688289999984789--------876289998204763204664


Q ss_pred             HHHHH---HHCCC-EEEEECCCCCCEE----CCCCCCHHHHHHHHHHCC--CCEEEEECCCHHHHHHHHHHHHHCCC-CC
Q ss_conf             99976---51031-1343035666413----157889789999997549--53999704577999999987874478-63
Q gi|254780869|r  344 HIKNR---LVEQG-VRVIAEDAECPVH----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGI-AC  412 (559)
Q Consensus       344 ~~~n~---l~~~g-~~vi~~~~~~~iH----~SGHa~~edl~~li~~ik--Pk~~IPvHGe~rhl~~h~~la~~~gv-~~  412 (559)
T Consensus       548 ~G~kEipi~~~~G~te~i~--inMeV~tieGFSGHsdrrqL~~yvr~~~PkP~ki~~~HGe~sk~~~lA~si~~-~~~i~  624 (637)
T COG1782         548 SGAKEIPIPGEDGKTEVIK--VNMEVETIEGFSGHSDRRQLMKYVRRMNPKPEKILLNHGEPSKCLDLASSIRR-KFKIE  624 (637)
T ss_pred             CCCEECCCCCCCCCEEEEE--EEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH-HHCEE
T ss_conf             4760232226899769999--76789984575777548999999986499985357646986789999999986-50515


Q ss_pred             EEEECCCEEEEE
Q ss_conf             155003227897
Q gi|254780869|r  413 VPPVRNGKMLRL  424 (559)
Q Consensus       413 i~l~~NGd~i~l  424 (559)
T Consensus       625 t~ap~nLetiR~  636 (637)
T COG1782         625 TYAPKNLETIRL  636 (637)
T ss_pred             EECCCCCCCEEC
T ss_conf             664654010642