>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

Probab=96.96 E-value=0.039 Score=34.37 Aligned_cols=171 Identities=13% Similarity=0.156 Sum_probs=98.7 Q ss_pred HHHCCCCCCCCCC-CCHHHHCCC-CCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH Q ss_conf 8742876776542-265662238-80208999966963268898852027776530268966999961588617789999 Q gi|254780869|r 268 AIDVGIIKKDQLF-LSDESFGLY-PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 (559) Q Consensus 268 a~~~g~l~~~~~~-i~~~~~~~~-p~~~~~ii~TGsqge~~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGnE~~~~~~ 345 (559) T Consensus 19 ~l~s~~~~~G~~v~~fE~~~~~~~g~k~~v~~~sgT~AL~l-al----~----al~~~~gdeVivp~~tf~-------at 82 (380) T TIGR03588 19 VLKSDFLTQGPTVPAFEEALAEYVGAKYAVAFNSATSALHI-AC----L----ALGVGPGDEVWTTPITFV-------AT 82 (380) T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH-HH----H----HCCCCCCCEEEECCCCCH-------HH T ss_conf 98479866897699999999999785949997588999999-99----9----849999899996785308-------86 Q ss_pred HHHHHCCCEEEEECCCCCCEECCCCCCHHHHHHHHHH---CCCCEEEEEC--CCHHHHHHHHHHHHHCCCCCEEEECC-- Q ss_conf 9765103113430356664131578897899999975---4953999704--57799999998787447863155003-- Q gi|254780869|r 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW---IRPQVLVAIH--GEPLHLVAHKELALQEGIACVPPVRN-- 418 (559) Q Consensus 346 ~n~l~~~g~~vi~~~~~~~iH~SGHa~~edl~~li~~---ikPk~~IPvH--Ge~rhl~~h~~la~~~gv~~i~l~~N-- 418 (559) T Consensus 83 ~~ai~~~Ga~pvf~Dvd~---~t~~id~~~l~~~it~~~~~ktkaIi~vh~~G~~~d~~~i~~ia~~~~i~---lIEDaA 156 (380) T TIGR03588 83 ANCALYCGAKVDFVDIDP---DTGNIDEDALEKKLAAAKGKLPKAIVPVDFAGKSVDMQAIAALAKKHGLK---IIEDAS 156 (380) T ss_pred HHHHHHCCCEEEEEECCH---HHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEECCHHHHHHHHHHCCCE---EEEECC T ss_conf 799998799689984410---00148988877777643677725999948985434899999999986988---999880 Q ss_pred -----------------CEEEEECCCCEEEEEEEECCCEEECCCCEECCCCHHHHHHHHHHHCCEE Q ss_conf -----------------2278973897045012321320212331002550588999974038749 Q gi|254780869|r 419 -----------------GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHL 467 (559) Q Consensus 419 -----------------Gd~i~l~~~~~~i~~~v~~g~~~vDG~~i~~~~~~vl~eR~~Ls~~GiV 467 (559) T Consensus 157 ~a~Ga~~~gk~~Gs~~~gd~~~fSF~~---~K~ittG----eGG~i~tnd~~l~~~~r~lr~~G~~ 215 (380) T TIGR03588 157 HALGAEYGGKPVGNCRYADATVFSFHP---VKIITTA----EGGAVTTNDEELAERMRLLRSHGIT 215 (380) T ss_pred CHHCCCCCCCCCCCCCCCCEEEEECCC---CCCCCCC----CCEEEEECCHHHHHHHHHHHHCCCC T ss_conf 011577578765664435246773355---5557778----8539996999999999999976967

HHsearch alignment for GI: 254780869 and conserved domain: TIGR03588