HHsearch alignment for GI: 254780869 and conserved domain: cd00616

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=90.90  E-value=1.2  Score=23.60  Aligned_cols=168  Identities=17%  Similarity=0.248  Sum_probs=89.3

Q ss_pred             HHCCCCCCCCCC-CCHHHHCCC-CCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
Q ss_conf             742876776542-265662238-802089999669632688988520277765302689669999615886177899999
Q gi|254780869|r  269 IDVGIIKKDQLF-LSDESFGLY-PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK  346 (559)
Q Consensus       269 ~~~g~l~~~~~~-i~~~~~~~~-p~~~~~ii~TGsqge~~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGnE~~~~~~~  346 (559)
T Consensus         9 l~s~~~~~G~~v~~fE~~~~~~~g~k~~v~~~sgt~-----Al~lal----~~l~~~~gdeVi~p~~t~~-------at~   72 (352)
T cd00616           9 LDSGWLTLGPKVREFEKAFAEYLGVKYAVAVSSGTA-----ALHLAL----RALGIGPGDEVIVPSFTFV-------ATA   72 (352)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHH-----HHHHHH----HHCCCCCCCEEEECCCCCH-------HHH
T ss_conf             836997798769999999999978593999768899-----999999----9869788399998997639-------899


Q ss_pred             HHHHCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEC--CCHHHHHHHHHHHHHCCCCCEEEECC------
Q ss_conf             7651031134303566641315788978999999754953999704--57799999998787447863155003------
Q gi|254780869|r  347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH--GEPLHLVAHKELALQEGIACVPPVRN------  418 (559)
Q Consensus       347 n~l~~~g~~vi~~~~~~~iH~SGHa~~edl~~li~~ikPk~~IPvH--Ge~rhl~~h~~la~~~gv~~i~l~~N------  418 (559)
T Consensus        73 ~ai~~~G~~pv~~Di~~~---t~~id~~~l~~~i~-~~tkaIi~vh~~G~~~d~~~i~~~~~~~~i~---lIeDaA~a~G  145 (352)
T cd00616          73 NAILLLGATPVFVDIDPD---TYNIDPELIEAAIT-PRTKAIIPVHLYGNPADMDAIMAIAKRHGLP---VIEDAAQALG  145 (352)
T ss_pred             HHHHHCCCEEEEEECCCC---CCCCCHHHHHHHCC-CCCCEEEEECCCCCCCCHHHHHHHHHHCCCE---EEEHHHHHCC
T ss_conf             999985998998407778---57758899997628-6870999968989866889999999977989---9802200216


Q ss_pred             -----------CEEEEECCCCEEEEEEEECCCEEECCCCEECCCCHHHHHHHHHHHCCE
Q ss_conf             -----------227897389704501232132021233100255058899997403874
Q gi|254780869|r  419 -----------GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGH  466 (559)
Q Consensus       419 -----------Gd~i~l~~~~~~i~~~v~~g~~~vDG~~i~~~~~~vl~eR~~Ls~~Gi  466 (559)
T Consensus       146 s~~~~~~~G~~gd~~~fS---F~~~K~it~g----eGG~i~tn~~~~~~~~~~lr~~G~  197 (352)
T cd00616         146 ATYKGRKVGTFGDAGAFS---FHPTKNLTTG----EGGAVVTNDEELAERARLLRNHGR  197 (352)
T ss_pred             CCCCCEECCCCCCCCCCC---CCCCCCCCCC----CCEEEEECCHHHHHHHHHHHHCCC
T ss_conf             834671256643425344---7877567677----734999699999999999996596