HHsearch results for GI: 254780869 and protein with PDBid: 1ycg_A
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.80 E-value=1.6e-18 Score=150.62 Aligned_cols=321 Identities=18% Similarity=0.148 Sum_probs=180.2
Q ss_pred CEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHC-CCCE
Q ss_conf 6069999517778648999776767888767502870795798766--412468996054301216078889862-9977
Q gi|254780869|r 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFL-HVPV 95 (559)
Q Consensus 19 ~N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~--~~~i~~i~iTH~H~DHiGalp~l~~~~-~~pI 95 (559)
-|||++. +++.+|||+|.. .. .+.+ .+.|++. .++|+.|++||+|.||+|+++++...+ ++++
T Consensus 36 ~NsYlI~-----~~~~vLIDtg~~--~~----~~~~---~~~l~~~~~~~~I~~Ii~TH~H~DH~Gg~~~l~~~~p~~~v 101 (398)
T 1ycg_A 36 YNAYLIV-----DDKTALVDTVYE--PF----KEEL---IAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHV 101 (398)
T ss_dssp ECCEEEC-----SSSCEEECCCCG--GG----HHHH---HHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEE
T ss_pred EEEEEEE-----CCCEEEEECCCH--HH----HHHH---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 9999997-----299999949984--67----9999---99999755976865999278986777059999986899989
Q ss_pred ECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEECC--CCCCCCCEEEEEECCCEEEECCCCEECCCCC
Q ss_conf 92999999999999854886556225517555577634899998556--7777653567987681799833402467766
Q gi|254780869|r 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN--HSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 (559)
Q Consensus 96 Y~s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~v~~~~~~--Hsip~a~~~~I~t~~g~i~ytGDfk~d~~p~ 173 (559)
|+++.+..++.... .........+..++++++|+.+++++++. | .|++..+ ..+..+++||||.-..+...
T Consensus 102 ~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~~h-~~~~~~~--~~~~~~iLfsgD~~~~~~~~ 174 (398)
T 1ycg_A 102 LCTQRAFDSLKAHY----SHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLH-WPDSMFT--YVPEEALLLPNDAFGQHIAT 174 (398)
T ss_dssp EECHHHHHHHHHHT----CSCCCEEEECCTTCEEECSSCEEEEEECTTSS-STTCEEE--EETTTTEEEEETTTCCCCCC
T ss_pred EECHHHHHHHHHHC----CCCCCCCEEECCCCEEEECCCEEEEEECCCCC-CCCCEEE--EECCCCEEECCCCCCCCCCC
T ss_conf 96899998776402----46775506825998898168159999789888-8885799--98898889918846767788
Q ss_pred CCCC---CCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEE----ECHHHHHHHHHHHH
Q ss_conf 5423---898899860878829999635645788877778799999999986-279839999----41477899999999
Q gi|254780869|r 174 LGDV---TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVT----TFSSSVSRIRSIID 245 (559)
Q Consensus 174 ~g~~---~d~~~l~~~~~~gv~~Li~esT~~~~~~~~~sE~~v~~~i~~~~~-~~~grViv~----~fasni~Ri~~i~~ 245 (559)
.+.. .+...+.. +..+...+-..++...+.+.++++-+ +.+=+.|++ ++-.++.|+...++
T Consensus 175 ~~~~~d~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~L~~l~~L~l~i~~I~PgHGpv~~~~~~~~i~~y~ 243 (398)
T 1ycg_A 175 SVRFDDQVDAGLIMD-----------EAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRKDPGRIIEAYA 243 (398)
T ss_dssp SCCBGGGSCHHHHHH-----------HHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBCSCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHH-----------HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCHHHHHHHHH
T ss_conf 653031122145689-----------875312100368789999999999865998249970898632069999999999
Q ss_pred -HHH-HHCCEEEEE-----CHH--HHH-HHHHHHHCCC----CCCCCCCCCHHH-HCCCCCCCEEEEEECCCCCH-----
Q ss_conf -998-718869984-----486--999-9998874287----677654226566-22388020899996696326-----
Q gi|254780869|r 246 -IAE-QIGRKIVLL-----GSS--LKR-VVSVAIDVGI----IKKDQLFLSDES-FGLYPREQLIVIATGSQGEP----- 305 (559)
Q Consensus 246 -~a~-~~~R~v~i~-----Grs--~~~-~~~~a~~~g~----l~~~~~~i~~~~-~~~~p~~~~~ii~TGsqge~----- 305 (559)
-+. +..+++.+. |++ |.+ +.+.+.+.|. ++.. ..+.++ ...+.+-+.+++.|.+++..
T Consensus 244 ~w~~~~~k~~i~ivy~S~~GnT~~~a~~ia~~~~~~g~~v~~~~~~--~~~~~~~~~~~~~~d~iilgspt~~g~~~~~~ 321 (398)
T 1ycg_A 244 RWAEGQGKAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS--VSDRNDVIKEILDARAVLVGSPTINNDILPVV 321 (398)
T ss_dssp HHHHTCCCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG--GSCHHHHHHHHHHCSEEEEECCCBTTBCCGGG
T ss_pred HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC--CCCHHHHHHHHHHCCEEEEECCCCCCCCCHHH
T ss_conf 9973166773499999786749999999998875279679999877--78979999999867979997276288661999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHC
Q ss_conf 889885202777653026896699996158861778999997651031134303566641315788978999999754
Q gi|254780869|r 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 (559)
Q Consensus 306 ~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGnE~~~~~~~n~l~~~g~~vi~~~~~~~iH~SGHa~~edl~~li~~i 383 (559)
...+.++... .++..-..+|+|-. |++.++..+.+.|...|++++.. ..++++|||+.+|++++.++-
T Consensus 322 ~~fl~~l~~~-----~~~~k~~~~fgs~g--~~~~a~~~~~~~l~~~g~~~v~~---~~~~~~~~P~~~~l~~~~~~g 389 (398)
T 1ycg_A 322 SPLLDDLVGL-----RPKNKVGLAFGAYG--WGGGAQKILEERLKAAKIELIAE---PGPTVQWVPRGEDLQRCYELG 389 (398)
T ss_dssp HHHHHHHHHH-----CCSSCEEEEEEEES--SSCCHHHHHHHHHHHTTCEESCS---SCCEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHCC-----CCCCCEEEEEEEEC--CCCHHHHHHHHHHHHCCCEEEEC---CEEEEECCCCHHHHHHHHHHH
T ss_conf 9999998604-----65799899999308--78679999999999779989617---718994579989999999999