PSIBLAST alignment of GI: 254780869 and protein with PDB id: 3bk1

>gi|166007339|pdb|3BK1|A Chain A, Crystal Structure Analysis Of Rnase J Length = 562
>gi|166007340|pdb|3BK2|A Chain A, Crystal Structure Analysis Of The Rnase JUMP COMPLEX Length = 562
 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 175/561 (31%), Positives = 278/561 (49%), Gaps = 22/561 (3%)

Query: 3   NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62
            + +  +PLGG GEIG N+ ++ +      +  ++D G++FP++  PGVDL+ P + +++
Sbjct: 14  QDHVEIIPLGGXGEIGKNITVFRF----RDEIFVLDGGLAFPEEGXPGVDLLIPRVDYLI 69

Query: 63  KERKNLMAIFITHAHEDHYGALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSKK 117
           + R  + A  +TH HEDH G L  L   +      VP+Y +   +GLL  K     +   
Sbjct: 70  EHRHKIKAWVLTHGHEDHIGGLPFLLPXIFGKESPVPIYGARLTLGLLRGKLEEFGLRPG 129

Query: 118 IPC-ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175
                     D++ VG  F+++  R  HSIP+   +VIR+P+G IVHTGD+KLD   I G
Sbjct: 130 AFNLKEISPDDRIQVGRYFTLDLFRXTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDG 189

Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235
            V+    +   G EG+L L+ D+TNA R G   SE  I K +  ++  A G V VTTF+S
Sbjct: 190 KVSHLAKVAQAGAEGVLLLIADATNAERPGYTPSEXEIAKELDRVIGRAPGRVFVTTFAS 249

Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295
            + RI+S+I  AE+ GRK+   G S  +   +A+++G +K      + E     P  Q++
Sbjct: 250 HIHRIQSVIWAAEKYGRKVAXEGRSXLKFSRIALELGYLKVKDRLYTLEEVKDLPDHQVL 309

Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355
           ++ATGSQG+P S L +L+        +   DTVI SS  IPGNE A+  + NRL   G  
Sbjct: 310 ILATGSQGQPXSVLHRLAFEGHAKXAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAY 369

Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413
           V+       VH SGH    +LK +     P+  +  HGE  H    K LA          
Sbjct: 370 VLY-PPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQXNFKWLAESXSRPPEKT 428

Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473
               NG + RL  +  E + EV HG+   DG  +G   +  +A RR  +  G + +  L 
Sbjct: 429 LIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHXAEEGLVVITALA 488

Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533
                   V E+V  G       G ++   + +  +  + +  + ++  L+ +R+ I   
Sbjct: 489 GED----PVVEVVSRGFV---KAGERLLGEVRRXALEALKNGVREKKP-LERIRDDIYYP 540

Query: 534 LRSLLKKVWGKKPLVTVFINK 554
           ++  LKK  G+ P +   + +
Sbjct: 541 VKKFLKKATGRDPXILPVVIE 561