BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780869|ref|YP_003065282.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] (559 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|51892694|ref|YP_075385.1| zinc-dependent hydrolase [Symbiobacterium thermophilum IAM 14863] gi|51856383|dbj|BAD40541.1| Zn-dependent hydrolase beta-lactamase superfamily [Symbiobacterium thermophilum IAM 14863] Length = 558 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 193/558 (34%), Positives = 315/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E+L +PLGG+GEIG N + YG I+ID G++FP++++ G+D+V PD T++ Sbjct: 7 KTEKLYVIPLGGLGEIGKNCMVVQYG----DDIIVIDAGLAFPEEEMLGIDIVIPDFTYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R+ + I ITH HEDH GA+ L +++PVYA+ +GL+E K + Sbjct: 63 LENREKVRGILITHGHEDHIGAVAYLLRNINIPVYATRLTLGLIEGKLAEMGMKLPAESK 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +AGD+V +G F+ E +RVNHSIP+ A+ + +PVG I+HTGD+K D I G+ D Sbjct: 123 AVRAGDQVKLGPFTCEFIRVNHSIPDACAIAVTTPVGTILHTGDFKFDQTPIDGEFADYR 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G GILAL+ DSTNA R G SE+ ++ N+ + + AKG +L+ TF+S+V RI+ Sbjct: 183 RLTELGKRGILALLSDSTNAERPGYTPSERSVRPNMERVFREAKGRILMATFASNVHRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++A ++G+K+ ++G S++ V +A+++G + + ++ + P Q +++ TG Sbjct: 243 QAIELAAEMGKKVAVVGRSMENTVRIALELGYLNVPEGTMVTVDELRRVPLNQQVILTTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ + + ++L DTV+F++ AIPGNE ++ N L +G VI + Sbjct: 303 SQGEPMAALSRMAVNDHKAIELYPGDTVLFAATAIPGNEKSVARTVNNLYRRGAEVIYDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + VHVSGH + K M RP+ V IHGE L+ HK+LA GI + N Sbjct: 363 S-AGVHVSGHASQEEQKLMINLTRPKFFVPIHGEYRMLLKHKQLAEACGIPSENILIGEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G + + +I +V G L DG +G ++ + R+QL+ G L V V +D Sbjct: 422 GTIFEFTRNSAQITGKVTSGQVLVDGLGVGDVGNIVLRDRKQLAQEGILIVVVAVDREEG 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I G P++V G Y + + + V + D Q + +L+ SI L Sbjct: 482 TIVGGPDMVSRGF-VYVRESEGLLDEAKERVKRALADQMQRGLPEWAVLKSSIRDVLSKY 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L ++P++ I +I Sbjct: 541 LYDKTHRRPMILPIIIEI 558 >gi|332976918|gb|EGK13740.1| metallo-beta-lactamase [Desmospora sp. 8437] Length = 572 Score = 567 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 290/558 (51%), Gaps = 9/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L LGG+ EIG NM + YG ++ID G+ FP+D++ G+D+V PDIT++ Sbjct: 20 SRSKLSIFALGGLDEIGKNMYVIRYG----DDIVVIDSGLMFPEDEMLGIDVVIPDITYL 75 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R + I +TH HEDH G L + L+VPVY + +GL+E K + K + Sbjct: 76 LENRDKVRGILLTHGHEDHIGGLPYILRELNVPVYGTKLTMGLVEHKLREAHLLNKTKRV 135 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +V +G+ +VNHSIP+ + + + +P G +VHTGD+K D + G D Sbjct: 136 IINNRSEVKLGSIQATFFKVNHSIPDAVGICLETPEGRVVHTGDFKFDMTPVNGQAADMH 195 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+L L+ DSTNA R G SE+ + + + + + AK V+V TF+S++ RI+ Sbjct: 196 RMAEIGKKGVLCLLSDSTNAERPGFTGSERNVGEALETVFRKAKQRVIVATFASNIHRIQ 255 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A+ RK+ ++G S+ VV++ +++G ++ L + + P ++ V++TG Sbjct: 256 QVVDAADLHKRKLAVVGRSMVNVVNIGMELGYLRVPPDLLIDPDDINRLPAHKVTVMSTG 315 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ G R +++ DTV+ ++ IPGNE + ++L G V+ Sbjct: 316 SQGEPMSALTRMAHGSHRKIEILPGDTVVLAATPIPGNEKTVARTVDQLFRVGANVVYSA 375 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 ++ VHVSGH DLK M I+P+ + IHGE AH +LA G+ + N Sbjct: 376 SQHGVHVSGHGSQEDLKLMLNLIKPKYFIPIHGEHRMQRAHSQLAETVGVRPEHIFICEN 435 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ +V G L DG +G ++ + R+ LS G L V V L + Sbjct: 436 GDVVEFSGGKARYGAKVQTGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKNNG 495 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + K+ + V T+ R + L+ SI AL Sbjct: 496 KILSGPDIISRGF-VYVRESEKLLDEANRIVTQTMEKCASERVSEWASLKTSIRDALSRF 554 Query: 538 LKKVWGKKPLVTVFINKI 555 L ++P++ I ++ Sbjct: 555 LYDKTRRRPMILPIIMEV 572 >gi|261407922|ref|YP_003244163.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|329929303|ref|ZP_08283056.1| ribonuclease J 1 [Paenibacillus sp. HGF5] gi|261284385|gb|ACX66356.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] gi|328936672|gb|EGG33115.1| ribonuclease J 1 [Paenibacillus sp. HGF5] Length = 559 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 180/560 (32%), Positives = 294/560 (52%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + +++L LGGVGEIG NM + Y +++D G+ FP++D+ G+D+V PDI++ Sbjct: 5 ISSDKLSIFALGGVGEIGKNMYVIQYA----GDIVVVDAGLKFPEEDMLGIDIVIPDISY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + I +TH HEDH G L + L+VPVY + +GL+E K + + Sbjct: 61 LTENRDKVRGILLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLREANLLGETKR 120 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I A +V +G + NHSIP+++ + I +P GN+VHTGD+K D + D Sbjct: 121 ILIHADSEVQLGNTLKATFFKTNHSIPDSVGICIETPEGNVVHTGDFKFDHTPVNDQYAD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + IG++G+LAL+ DSTNA R G SEK + + DI + A+ V+V TF+S+V R Sbjct: 181 LQRMAEIGSKGVLALLSDSTNAERPGFTPSEKNVGIVLEDIFRKAEQRVVVATFASNVHR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ +++ AE GRKI ++G S+ VVS+A ++G + D + + E ++++V+ Sbjct: 241 IQQVVNAAESTGRKITVIGRSMVNVVSIAAELGYLHIPDGMLIEPEEVNKMAADRVVVLC 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++R R V + DTVI ++ +PGNE +G + L G VI Sbjct: 301 TGSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPVPGNEKYVGRTIDELFRLGADVIY 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +LK M ++PQ + +HGE H LA G+ + Sbjct: 361 SGSNSGVHVSGHGSQEELKLMLNLMKPQFFIPVHGEYRMQRRHALLAESVGVDPDNIFIT 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G+++ + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 421 DIGEIVEIQGGSARKAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ 480 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + +I P+I+ G Y + + + V +T+ L + L+ S+ AL Sbjct: 481 NGSIVSGPDIISRGF-VYVRESEGLLDEANRIVSSTLQKLMSENVNEWASLKTSVKDALG 539 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 RFLYEQTRRRPMILPIIMEV 559 >gi|295696186|ref|YP_003589424.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] gi|295411788|gb|ADG06280.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] Length = 555 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 296/558 (53%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+GEIG NM Y YG +++D G+ FP++D+ G+D+V PD+T++ Sbjct: 4 SNHKLSIIPLGGLGEIGKNMTAYQYG----NDIVVVDAGLKFPEEDMLGIDVVIPDVTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH G L + ++VPVY + +GL+EAK + + Sbjct: 60 VENKNRVRGIVLTHGHEDHIGGLPYVLKHINVPVYGTRLTLGLVEAKLREHNLLDVTKLV 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ +G F + NHSIP+T+ + + P G VHTGD+K D + G + D Sbjct: 120 TVTNRSQIKLGQFLVSFFHTNHSIPDTVGIALECPEGICVHTGDFKFDFTPVDGRMADYH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G G+L L+ DSTNA R G +SE+ + + I D+ + A+ +++ TF+S++ RI+ Sbjct: 180 KLAELGERGVLCLLSDSTNAERPGYTMSERVVGQTIDDVFRQAEKRIILATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +ID AE+ GRK+ ++G S+ +++A+++G ++ + + P ++++++TG Sbjct: 240 QVIDAAERYGRKVSVVGRSMVNNINIAVELGYLRVNKGTMVDPDDIAKLPAHKVVILSTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++R R V++ DTVI ++ IPGNE I ++L G VI + Sbjct: 300 SQGEPMSALTRMARATHRKVEIVPGDTVIVAASPIPGNEKDIARTIDQLFRIGANVIYQQ 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M +RP+ + +HGE L H ELA G+ + + N Sbjct: 360 V-SGVHVSGHGSQEELKLMLNLVRPKYFIPVHGEFRMLKIHSELAQATGVPEDRIFILDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ +V G L DG +G ++ + R+ LS G L V V + Sbjct: 419 GDVMEFQGGEARQAGKVTAGAVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTMSKQDG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + + + + V T+ L + ++ + AL Sbjct: 479 TILSGPDIISRGF-VYVRESEALLEEANRIVTVTLKKLVAENVSEWSSIKTGVRDALGRF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEQTRRRPMILPIIMEV 555 >gi|147677624|ref|YP_001211839.1| hydrolase [Pelotomaculum thermopropionicum SI] gi|146273721|dbj|BAF59470.1| predicted hydrolase [Pelotomaculum thermopropionicum SI] Length = 554 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 308/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GEIG NM + +G +++DCG+ FP++++ G+D+V PDI+++ Sbjct: 3 KEPKLSLIPLGGLGEIGKNMMVVRFG----ENILLVDCGLMFPEEEMLGIDIVIPDISYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R+ + I +TH HEDH GAL + L VPVY + +GLL+ K + + + Sbjct: 59 LENREIVRGIVLTHGHEDHIGALPYVLRQLKVPVYGTKLTLGLLQGKLKEQGIYGEAALH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D V +G F +E +RV+HSIP+ +A+ I +P+G ++HTGD+K+D + G VTD Sbjct: 119 TVKPRDSVQIGPFKVEFIRVSHSIPDAVAVAIHTPLGVVLHTGDFKIDQTPVDGQVTDFQ 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G +G+L L+ DSTNA R G +SE+ + + + +++ TF+++V R++ Sbjct: 179 RLAQLGEKGVLVLLSDSTNAERPGYTMSERVVGNTFDETFRQTTDRIIIATFATNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A + RK+ ++G S+ VV++A ++G + + + E PR +++++ TG Sbjct: 239 QAIQAAYKHNRKVAVVGRSMVNVVNIANELGYMDIPEGTLVELEEANRLPRSRVVILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R V++ DT+I S+ IPGNE + I ++L +QG RVI E Sbjct: 299 SQGEPMSALTRMALADHRQVEILPGDTIIISAIPIPGNEKLVARIIDQLFKQGARVIYEP 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGHP +LK M +RP+ V +HGE L+ H ELA G+ + N Sbjct: 359 V-SGIHVSGHPSQEELKLMINLVRPKFFVPVHGEYRMLIKHAELARDVGVLPENIFVAEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L I+ V G L DG +G ++ + R+ LS G L V V ++ Sbjct: 418 GQVLEFTRRSGRIVGRVTAGKVLVDGLGVGDVGNIVLRDRKLLSQDGILIVVVTINRESG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + ++ + V + + + + ++ + AL Sbjct: 478 LIMAGPDIVSRGF-VYVRESEELLEEAKIKVKSALDKCTEKGISEWSSIKSQVRDALGKF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYEKTRRRPMILPIIMEV 554 >gi|315648079|ref|ZP_07901180.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315276725|gb|EFU40068.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 559 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 179/560 (31%), Positives = 294/560 (52%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + +++L LGGVGEIG NM + Y +++D G+ FP++D+ G+D+V PDI++ Sbjct: 5 ISSDKLSIFALGGVGEIGKNMYVIQYA----NDIVVVDAGLKFPEEDMLGIDIVIPDISY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + I +TH HEDH G L + L+VPVY + +GL+E K + + Sbjct: 61 LTENRDKVRGILLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLREANLLGETKR 120 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I A +V +G + NHSIP+++ + I +P GN+VHTGD+K D + D Sbjct: 121 ILINADSEVQLGNTLKATFFKTNHSIPDSVGISIETPEGNVVHTGDFKFDHTPVNDQYAD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + IG++G+LAL+ DSTNA R G SEK + + DI + A+ V+V TF+S+V R Sbjct: 181 LQRMAEIGSKGVLALLSDSTNAERPGFTPSEKNVGIVLEDIFRKAEQRVVVATFASNVHR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ +++ AE GRKI ++G S+ VVS+A ++G + + + + E ++++V+ Sbjct: 241 IQQVVNAAESTGRKITVIGRSMVNVVSIAAELGYLHIPEGMLIEPEEVNKMAADRVVVLC 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++R R V + DTVI ++ +PGNE +G + L G VI Sbjct: 301 TGSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPVPGNEKYVGRTIDELFRLGADVIY 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +LK M ++PQ + +HGE H LA G+ + Sbjct: 361 SGSNSGVHVSGHGSQEELKLMLNLMKPQFFIPVHGEYRMQRRHALLAESVGVDPDNIFIT 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G+++ + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 421 DIGEIVEIQGGSARKAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ 480 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + +I P+I+ G Y + + + V +T+ L + L+ S+ AL Sbjct: 481 NGSIVSGPDIISRGF-VYVRESEGLLDEANRIVSSTLQKLMSENVNEWASLKTSVKDALG 539 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 RFLYEQTRRRPMILPIIMEV 559 >gi|20807702|ref|NP_622873.1| metallo-beta-lactamase superfamily hydrolase [Thermoanaerobacter tengcongensis MB4] gi|20516253|gb|AAM24477.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Thermoanaerobacter tengcongensis MB4] Length = 554 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 183/557 (32%), Positives = 310/557 (55%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ YG I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 4 KAKLKIIPLGGLNEIGKNMTVFEYG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VP+Y + IGL+E K + + I+ Sbjct: 60 KNREKVKAIVLTHGHEDHIGALPYVLKQLNVPIYGTRLTIGLVEYKLKEHGLLRDSKLIT 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + V++G F +E +R +HSI ++ AL I +PVG + H+GD+K+D I G+V D Sbjct: 120 VKPRETVEIGQFKVEFIRTSHSIADSAALAIHTPVGTVFHSGDFKIDFTPIDGEVPDLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + ++ + A+ ++V TF+S++ R++ Sbjct: 180 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDNLFRKAEQRIIVATFASNIHRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 II+ A++ GRK+ + G S+ VV+VA+++G + + L + + P ++++I TGS Sbjct: 240 IINSAQKYGRKVAISGRSMVNVVNVAMELGYLTVPEGLLIDLDEANKLPHNKVVIITTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V++ DTVI S+ IPGNE I + N+L ++G VI E Sbjct: 300 QGEPMSALTRMASSEHKKVEIVPGDTVIISASPIPGNERLISRVINQLFKKGANVIYEAL 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 360 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAESLGMPPENIFVVDNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L D I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 419 TVLEFTKDSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGA 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+I+ G Y + + + V + + + ++ I L + L Sbjct: 479 VIAGPDIISRGF-VYVRESEDLMEESKNIVREVLAKCEKEEINEWATIKSMIKDNLSNFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 YEKTKRNPMILPIIMEI 554 >gi|251797383|ref|YP_003012114.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247545009|gb|ACT02028.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 559 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 180/560 (32%), Positives = 290/560 (51%), Gaps = 11/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L+ LGGVGEIG NM + Y S +++D G+ FP++D+ G+D+V PDI+++ Sbjct: 5 NQDKLLVFALGGVGEIGKNMYVIQY----SNDIVIVDAGLKFPEEDMLGIDIVIPDISYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + I ITH HEDH G L + L+VPVY + +GL+E K + + I Sbjct: 61 TENRDKVRGILITHGHEDHIGGLSYVLRQLNVPVYGTKLTLGLIEGKLKEAGLLGETKRI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +V +G + NHSIP+++ + + +P G IVHTGD+K D + G D Sbjct: 121 VIDADSEVQLGTIQASFFKTNHSIPDSIGVALDTPEGTIVHTGDFKFDYTPVNGQYADLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+LAL+ DSTNA R G SEK + + + DI + V+V TF+S+V RI+ Sbjct: 181 RMAEIGKKGVLALLSDSTNAERPGFTPSEKNVGEELEDIFHKSSQRVVVATFASNVHRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I+ A R + ++G S+ VV++A D+G + + + + E ++++++ TG Sbjct: 241 QVINAAIATKRYVAVVGRSMVNVVTIASDLGYLHIPEGMIIEPEEVNKLAADRVVILCTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++R R V + DTVI ++ IPGNE +G + L G VI Sbjct: 301 SQGEPMSALTRMARSTHRKVDILPGDTVIIAATPIPGNERYVGRTVDELFRLGAHVIYGP 360 Query: 361 -AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + VHVSGH +LK M I+P+ + IHGE L H +L GI + + Sbjct: 361 GSISGVHVSGHGSQEELKLMLNLIKPKYFIPIHGEYRMLRQHAQLGEAVGIERSHIFVIE 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG+ + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 421 NGETVEFQGGLARKGSKVQAGNILIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQD 480 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 +I P+I+ G Y + + K V +T+ L + + L+ ++ AL Sbjct: 481 GGSIVSGPDIISRGF-VYVRESEGLLDEANKIVTSTLNKLMHDKVNEWASLKTNVKDALG 539 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 RFLYEQTRRRPMILPIIMEV 559 >gi|296132913|ref|YP_003640160.1| RNA-metabolising metallo-beta-lactamase [Thermincola sp. JR] gi|296031491|gb|ADG82259.1| RNA-metabolising metallo-beta-lactamase [Thermincola potens JR] Length = 554 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 309/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GEIG NM + YG ++ID G+ FP++++ G+D+V PDIT++ Sbjct: 3 KELKLNLIPLGGLGEIGKNMMVVKYG----ENILVIDSGLMFPEEEMLGIDVVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH GAL + L VPVY + +GLL+ K +S + + Sbjct: 59 LENKDIVRGIVLTHGHEDHIGALPYILKDLDVPVYGTKLTLGLLQGKLKENNMSNCVTLV 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D VD+G F +E +RV+HSIP+ +A+ I +PVG ++HTGD+KLD + GDVTD Sbjct: 119 TVKPRDVVDIGPFKVEFIRVSHSIPDAVAIAIHTPVGTVLHTGDFKLDQTPVDGDVTDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L L+ DSTN R G +SE+ + + + AK +++ TF+S+V R++ Sbjct: 179 RIAELGQKGVLVLLSDSTNVERPGYTMSERVVGATFDETFRMAKDRIIIATFASNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 I A + GRK+ ++G S+ VVS+A ++G I + + + + P Q+ ++ TG Sbjct: 239 QAISTAYKYGRKVAIVGRSMLNVVSIASELGYIKFPEDILVDLDEINRLPSNQVTILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R V++ DTVI S+ IPGNE + + L +QG VI E Sbjct: 299 SQGEPMSALTRMALNDHRQVEIIPGDTVIISATPIPGNEKLVARTIDHLFKQGANVIYES 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGHP +LK M ++P+ V +HGE HL+ H +LA+ GI V N Sbjct: 359 F-SGIHVSGHPSQEELKMMINLVKPKFFVPVHGEYRHLIKHAQLAVDMGIPSSNVFVAEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G +L I V G L DG +G ++ + R+QLS G L V V ++ Sbjct: 418 GHVLEFSRHRGRISGRVTAGKVLVDGLGVGDVGNIVLRDRKQLSQDGILIVVVTIEKETG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + K+ + + V + + + ++ ++ A+ Sbjct: 478 GVVAGPDIVSRGF-VYVRESEKLMEEAKEKVKLALEKCEEKGITEWASIKSNVRDAIGKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYEKTRRRPMILPIIMEV 554 >gi|302389785|ref|YP_003825606.1| RNA-metabolising metallo-beta-lactamase [Thermosediminibacter oceani DSM 16646] gi|302200413|gb|ADL07983.1| RNA-metabolising metallo-beta-lactamase [Thermosediminibacter oceani DSM 16646] Length = 555 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 181/561 (32%), Positives = 311/561 (55%), Gaps = 12/561 (2%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M +L+ +PLGG+GEIG NM + Y ++ ++ID G+ FP++++ GVD+V PDI Sbjct: 1 MSKNEQKLLIIPLGGIGEIGKNMTVIQY----EKEILVIDAGLMFPEEEMLGVDMVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++++ + + I ITH HEDH GAL + ++ P+Y + +GL+E K + K I Sbjct: 57 TYLVENKDFIKGIIITHGHEDHIGALPYVLQQINAPLYGTRLTMGLVEVKLKETKFKKNI 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + V +G F+++ RVNHSIP+++ + I +PVG + HTGD+K D + G + Sbjct: 117 AINVIKPPASVKIGNFTVDFFRVNHSIPDSVGVAIYTPVGTVCHTGDFKFDQTPVDGKIA 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L +G +G+LAL+ DSTNA R+G +SE+ + I +I AKG ++V TF+S++ Sbjct: 177 DLHKLAELGTKGVLALLSDSTNAERQGYTMSERVVGSTIEEIFGRAKGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ +ID A + GRK+ ++G S+ VV++A+++G + L + + P E++++I Sbjct: 237 RIQQVIDAAFKFGRKVAVVGRSMVNVVNIALNLGYLSIPKDLLMELDDIQKLPNEKVVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL +++ E + V++ DTV+ ++ IPGNE + + L +QG VI Sbjct: 297 TTGSQGEPMSALTRMAMCEHKKVEIIPGDTVLIAATPIPGNEKFVARTIDHLFKQGAEVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 E VHVSGH +LK M ++P+ + +HGE HL+ H LA + GI + Sbjct: 357 YEAI-SGVHVSGHASQEELKLMLNLVKPKYFIPVHGEYRHLIHHANLAKEVGIPEGNIFI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG+++ L D + +V G + DG +G ++ + R+QL+ G L V V +D Sbjct: 416 PENGRIVELTKDSARLAGKVTAGKVMVDGLGVGDVGNIVLRDRKQLAQDGILIVVVTIDK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + V + + + ++ + L Sbjct: 476 ETTEVVAGPDIISRGF-VYVRESEVLMEQSREIVRQALRKCQEEEITEWSTIKSQVRDTL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 535 GKFLFEQTRRRPMILPIIMEV 555 >gi|83589917|ref|YP_429926.1| hypothetical protein Moth_1069 [Moorella thermoacetica ATCC 39073] gi|83572831|gb|ABC19383.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 555 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 302/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ +PLGG+GEIG NM YG ++IDCG++FP+D+L GVD+V PD T++ Sbjct: 4 NERKVSLIPLGGLGEIGKNMMAIRYG----NSILVIDCGLTFPEDELLGVDVVIPDYTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R+ + I +TH HEDH GAL + L+VPVY + + L++AK + + Sbjct: 60 LENRQMVKGIIVTHGHEDHIGALPYVLKDLNVPVYGTKLTLALIQAKLKEQGNFNGVRLQ 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + +G F +E + V+HSI +T+AL I +PVG IVHT D+K+D I G+V D Sbjct: 120 QVKPRDTLKIGPFRVEFIHVSHSIADTVALAIHTPVGTIVHTSDFKIDYTPIDGEVFDFY 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L LM DSTN R G +SE+ + ++ + A+ +++ +F+S++ R++ Sbjct: 180 KFAELGEKGVLVLMSDSTNVERPGFTMSERVVGGTFDEVFRRARERIIIASFASNIHRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II A + RK+ ++G S+ VV++A ++G + + + P+ Q ++I+TG Sbjct: 240 QIISTAYKYNRKVAVVGRSMVNVVNIAQEIGYLNIPEGTLVELSELAHLPKNQTVIISTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++R + R +++ DTVI S+ IPGNE + ++L +QG V E Sbjct: 300 SQGEPMSALTRIARNDHRQIEIVPGDTVIISALPIPGNEKLVARTVDQLFKQGADVYHEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 E VHVSGH +LK + ++P+ V +HGE L+ H LA + GI + N Sbjct: 360 VEG-VHVSGHASQEELKLVLSLVKPKFFVPVHGEYRMLIKHARLAEELGIPPENIFVAEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+++ + V G L DG +G ++ + R+QL+ G L V + L Sbjct: 419 GQVMEFTREEGNFNGRVTAGRLLIDGLGVGDVGNIVLRDRKQLAQDGLLIVVLTLSKETG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + ++ + V + + + D ++ +I L Sbjct: 479 SVVAGPDIISRGF-VYVRESEELLDEAKERVRQALDKCSERKVNDWSTIKGNIRDNLSKF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTRRRPMILPIIMEV 555 >gi|310641611|ref|YP_003946369.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309246561|gb|ADO56128.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 559 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 177/559 (31%), Positives = 292/559 (52%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N++L+ LGGVGEIG NM + YG +++D G+ FP++D+ G+D+V PDI+++ Sbjct: 6 NNDKLMIFALGGVGEIGKNMYVVQYG----NDIVVVDSGLKFPEEDMLGIDIVIPDISYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + I +TH HEDH G L + L+VPVY + +GL+E K + + I Sbjct: 62 TENRDKVRGIVLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLKEANLLGETKRI 121 Query: 122 SFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ +G + + NHSIP+++ + I +P G +VHTGD+K D + G D Sbjct: 122 LINADSEIKLGSTLKVTFFKTNHSIPDSVGVCIDTPEGAVVHTGDFKFDHTPVNGQYADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG G+LAL+ DSTNA + G SEK + + DI + ++ V+V TF+S+V RI Sbjct: 182 QRMAEIGTRGVLALLSDSTNAEKPGFTPSEKSVGIVLEDIFRKSRQRVVVATFASNVHRI 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ AE GRK+ ++G S+ VV +A D+G ++ D + + E G ++++++ T Sbjct: 242 QQVINAAEATGRKVTVIGRSMVNVVGIASDLGYLEIPDGMLIEPEEVGKMSADRVVILCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++R R V + D+VI ++ +PGNE +G + L G V Sbjct: 302 GSQGEPMSALTRMARSTHRKVDILPGDSVIIAATPVPGNEKYVGRTIDELFRLGANVYYS 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 A +HVSGH +LK M ++P+ + IHGE H LA GI + Sbjct: 362 AANPGIHVSGHGSQEELKLMLNLMKPKFFLPIHGEFRMQRRHALLAEGVGIEPENIFITD 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 G+++ + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 422 IGEVIEIQNGGARRAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQD 481 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + + V +T+ L + L+ ++ AL Sbjct: 482 GTIKSGPDIISRGF-VYVRESEGLLDEANRIVSSTLHKLMSENVNEWASLKTNVKDALGR 540 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 541 FLYEQTRRRPMILPIIMEV 559 >gi|313892289|ref|ZP_07825882.1| ribonuclease J 1 [Dialister microaerophilus UPII 345-E] gi|313119427|gb|EFR42626.1| ribonuclease J 1 [Dialister microaerophilus UPII 345-E] Length = 553 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 295/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGG+GE+G NM + Y + +++D G++FP +++PG+D+V PD ++ Sbjct: 1 MAKSRLQIIPLGGLGEVGKNMMVIRY----EDEIVVVDSGLAFPTENMPGIDIVIPDFSY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + A+ ITH HEDH GAL L ++VPVY + GL+E K + ++ Sbjct: 57 LIENKDKVKAVLITHGHEDHIGALPYLLKEINVPVYGTKLTCGLIEGKLIEAQIKNYKLN 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +AGD+ +G F V HSIP+ + IR+PVG +VHTGD+K D TD Sbjct: 117 VV-KAGDEFKLGLFKCGFFHVCHSIPDACGVFIRTPVGTVVHTGDFKFDHTPKDELQTDL 175 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+LAL DSTNA G SE + K++ D AKG ++V TF+S+VSR+ Sbjct: 176 YKLAELGHRGVLALCADSTNAECPGHTPSEAVVAKSLMDQFSLAKGRIIVATFASNVSRL 235 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ID A RK+ G S+ V+ A+D+G +K + + E YP Q+ ++ T Sbjct: 236 QMAIDAAIAHRRKVCAFGRSMVNVIGKALDMGYLKAPEGTIIEPEEMNRYPENQICILTT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP + L++++ G R V + DTVI S+ IPGNE ++G+ N+L+ G++V+ Sbjct: 296 GSQGEPMAGLSRMADGSHRQVTVHSGDTVIISASPIPGNENSVGNTINKLMRMGIKVVTN 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL--ALQEGIACVPPVR 417 + VHVSGH DLK M ++P+ + IHGE L H E+ L Sbjct: 356 KST-RVHVSGHASEEDLKTMLSLVKPKFFIPIHGEFRMLYKHAEIATILGMPKKNSLVAE 414 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ L + +I +V G DG +G ++ + R+QLS G + V + L+ Sbjct: 415 NGSVIELTRNSAKITGKVQAGAIYVDGLGVGDVGNIVLRDRQQLSEDGVVIVVISLEKGS 474 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y D + V ++ + K+ LL+ I +L Sbjct: 475 NRLLAGPDIVTRGF-VYVRDSESLLNEAKARVEKSLDYCEKRNIKEWNLLKTQIRDSLGK 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 534 YFYERTKRRPMILPVIQEV 552 >gi|167464752|ref|ZP_02329841.1| hypothetical protein Plarl_19712 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382331|ref|ZP_08056238.1| ribonuclease J1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153684|gb|EFX46059.1| ribonuclease J1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 558 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 175/559 (31%), Positives = 291/559 (52%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 NE+L LGGVGEIG NM + Y ++ID G+ FP++D+ G+D+V PDI+++ Sbjct: 5 NNEKLTIFALGGVGEIGKNMYVVQY----DNDIVVIDSGLKFPEEDMLGIDIVIPDISYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I ITH HEDH G L + L+VPVY + +GL+E K + + I Sbjct: 61 LENKDKVRGILITHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLIETKLKEAGLLGETKRI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++ +G + + NHSIP+++ + + +P GN+VHTGD+K D + D Sbjct: 121 LINADSEIKMGTMTATFFKTNHSIPDSVGVCLETPEGNVVHTGDFKFDQTPVNDQYADLH 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+LAL+ DSTNA R G SEK + I ++ + A+ V++ TF+S++ R++ Sbjct: 181 RMAEIGKKGVLALLSDSTNAERPGYTGSEKSVGITIEEVFRKARQRVVLATFASNIHRVQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +ID A RK+ ++G S+ VV++A ++G ++ D + + E ++++++ TG Sbjct: 241 QVIDAAYATNRKLTVIGRSMVNVVTIASELGYLRVPDGILIEPEEVNRLAADRVVILCTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++R R V + DTV+ ++ IPGNE +G + L G VI Sbjct: 301 SQGEPMSALTRMARSTHRKVDILPGDTVVIAATPIPGNERYVGRTVDELFRLGAHVIYGP 360 Query: 361 -AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 + VHVSGH +LK M ++P+ + IHGE L H +LA G+ + + Sbjct: 361 GSVTGVHVSGHGSQEELKLMLNLMKPKYFIPIHGEYRMLRLHGQLAESVGMDKEDIFIID 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG + + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 421 NGDTVEIQNGVARKAGKVQAGNILIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQE 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + + V T+ L + L+ + AL Sbjct: 481 GTILSGPDIISRGF-VYVRESEGLLDEANRIVTNTLNKLMNDNVNEWASLKTHVKDALGR 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 FLYEQTRRRPMILPIIMEV 558 >gi|167037470|ref|YP_001665048.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040132|ref|YP_001663117.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|166854372|gb|ABY92781.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|166856304|gb|ABY94712.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 560 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 312/557 (56%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ +G I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 10 KAKLKIIPLGGLNEIGKNMTVFEFG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VPVY + IGL+E K + + K I+ Sbjct: 66 KNREKVRAIVLTHGHEDHIGALPYILKQLNVPVYGTRLTIGLVEYKLKEQGILKDSKLIT 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + V++G F +E +R +HSI ++ AL I +PVG + H+GD+K+D I G++ D Sbjct: 126 VKPREIVEIGQFKVEFLRTSHSIADSAALAIHTPVGTVFHSGDFKIDFTPIGGEIADLHR 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + ++ + A+ ++VTTF+S++ R++ Sbjct: 186 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDNLFRKAEQRIIVTTFASNIHRVQQ 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 IID A + GRK+ + G S+ VV+VA+++G + D L + + P +++ +I TGS Sbjct: 246 IIDSAHKYGRKVAISGRSMLNVVNVAMELGYLIVPDGLLIDIDEANKLPHDKVAIITTGS 305 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V++ DTVI S+ AIPGNE I + N+L ++G VI E Sbjct: 306 QGEPMSALTRMASSEHKKVEIVPGDTVIISASAIPGNEKLISRVINQLFKKGANVIYEAL 365 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 366 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAETLGMPPQNIFIVDNG 424 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L + I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 425 TVLEFTKNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGG 484 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + + + V + + + ++ I L S L Sbjct: 485 IIAGPDIISRGF-VYVRESEDLMEESKNVVRDVLSKCKKEGISEWATIKSMIKDDLSSFL 543 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 544 YEKTKRNPMILPIIMEI 560 >gi|308068715|ref|YP_003870320.1| hypothetical protein PPE_01946 [Paenibacillus polymyxa E681] gi|305857994|gb|ADM69782.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 559 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 178/559 (31%), Positives = 291/559 (52%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N++L+ LGGVGEIG NM + YG +++D G+ FP++D+ G+D+V PDI+++ Sbjct: 6 NNDKLMIFALGGVGEIGKNMYVVQYG----NDIVVVDSGLKFPEEDMLGIDIVIPDISYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + I +TH HEDH G L + L+VPVY + +GL+E K + + I Sbjct: 62 TENRDKVRGIVLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLKEANLLGETKRI 121 Query: 122 SFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ +G R NHSIP+++ + I +P G +VHTGD+K D + G D Sbjct: 122 LINADSEIKLGSTLKATFFRTNHSIPDSVGVCIDTPEGAVVHTGDFKFDHTPVNGQYADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG G+LAL+ DSTNA + G SEK + + DI + ++ V+V TF+S+V RI Sbjct: 182 QRMAEIGTRGVLALLSDSTNAEKPGFTPSEKSVGIVLEDIFRKSRQRVVVATFASNVHRI 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ AE GRK+ ++G S+ VV +A D+G ++ D + + E G ++++++ T Sbjct: 242 QQVINAAEATGRKVTVIGRSMVNVVGIASDLGYLEIPDGMLIEPEEVGKMSADRVVILCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++R R V + D+VI ++ +PGNE +G + L G V Sbjct: 302 GSQGEPMSALTRMARSTHRKVDILPGDSVIIAATPVPGNEKYVGRTIDELFRLGANVYYS 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 A +HVSGH +LK M ++P+ + IHGE H LA GI + Sbjct: 362 AANPGIHVSGHGSQEELKLMLNLMKPKFFLPIHGEFRMQRRHALLAEGVGIEPENIFITD 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 G+++ + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 422 IGEVIEIQNGGARRAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQD 481 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + + V +T+ L + L+ ++ AL Sbjct: 482 GTIKSGPDIISRGF-VYVRESEGLLDEANRIVSSTLHKLMSENVNEWASLKTNVKDALGR 540 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 541 FLYEQTRRRPMILPIIMEV 559 >gi|304404309|ref|ZP_07385971.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] gi|304347287|gb|EFM13119.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] Length = 559 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 289/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++L+ LGGVGEIG NM + YG +++D G+ FP++D+ G+D+V PDI+++ Sbjct: 7 QDKLLIFALGGVGEIGKNMYVVQYG----NDIVIVDAGLKFPEEDMLGIDIVIPDISYLT 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + R + I +TH HEDH G L + L+VPV+ + +GL+E K + + I Sbjct: 63 ENRDKVRGILVTHGHEDHIGGLPFVLKNLNVPVFGTKLTLGLIEGKLKEAGLLGETKRIL 122 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A +V +G+ + NHSIP+++ + + +P G +VHTGD+K D + + D Sbjct: 123 INADSEVQLGSIVATFFKTNHSIPDSLGVCLDTPEGRVVHTGDFKFDHTPVNNEFADLQR 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG EG+LAL+ DSTNA R G SE + N+ +I + A V+V TF+S+V RI+ Sbjct: 183 IAEIGREGVLALLSDSTNAERPGFTPSESVVGTNLEEIFRKATQRVVVATFASNVHRIQQ 242 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A RKI ++G S+ VVS+A D+G + + + + E ++++++ TGS Sbjct: 243 VVNAAAATRRKIAVVGRSMVNVVSIAGDLGYLNIPEGMIIEPEEVNKMAADRVVILCTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED- 360 QGEP SAL +++R R + + DTVI ++ IPGNE +G + L G VI Sbjct: 303 QGEPMSALTRMARSTHRKIDILPGDTVIIAATPIPGNERHVGRTVDELFRLGANVIYGPG 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VHVSGH +LK M IRP+ + IHGE L H +L GI + + N Sbjct: 363 SVSGVHVSGHGSQEELKLMLNLIRPKFFIPIHGEYRMLRHHAQLGESVGIERENIFIIDN 422 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 423 GDTVEFQGGNARKGSKVQAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQDG 482 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + + + V +T+ L + L+ ++ AL Sbjct: 483 TILSGPDIISRGF-VYVRESEGLLDEANRIVTSTLNKLMNDNVNEWASLKTNVKDALGRF 541 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 542 LYEQTRRRPMILPIIMEV 559 >gi|256752539|ref|ZP_05493395.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914216|ref|ZP_07131532.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter sp. X561] gi|307724549|ref|YP_003904300.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter sp. X513] gi|320115884|ref|YP_004186043.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256748605|gb|EEU61653.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889151|gb|EFK84297.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter sp. X561] gi|307581610|gb|ADN55009.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter sp. X513] gi|319928975|gb|ADV79660.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 554 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 312/557 (56%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ +G I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 4 KAKLKIIPLGGLNEIGKNMTVFEFG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VPVY + IGL+E K + + K I+ Sbjct: 60 KNREKVRAIVLTHGHEDHIGALPYILKQLNVPVYGTRLTIGLVEYKLKEQGILKDSKLIT 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + V++G F +E +R +HSI ++ AL I +PVG + H+GD+K+D I G++ D Sbjct: 120 VKPREIVEIGQFKVEFLRTSHSIADSAALAIHTPVGTVFHSGDFKIDFTPIGGEIADLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + ++ + A+ ++VTTF+S++ R++ Sbjct: 180 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDNLFRKAEQRIIVTTFASNIHRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 IID A + GRK+ + G S+ VV+VA+++G + D L + + P +++ +I TGS Sbjct: 240 IIDSAHKYGRKVAISGRSMLNVVNVAMELGYLIVPDGLLIDIDEANKLPHDKVAIITTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V++ DTVI S+ AIPGNE I + N+L ++G VI E Sbjct: 300 QGEPMSALTRMASSEHKKVEIVPGDTVIISASAIPGNEKLISRVINQLFKKGANVIYEAL 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 360 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAETLGMPPQNIFIVDNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L + I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 419 TVLEFTKNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGG 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + + + V + + + ++ I L S L Sbjct: 479 IIAGPDIISRGF-VYVRESEDLMEESKNVVRDVLSKCKKEGISEWATIKSMIKDDLSSFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 YEKTKRNPMILPIIMEI 554 >gi|329121653|ref|ZP_08250273.1| metallo-beta-lactamase [Dialister micraerophilus DSM 19965] gi|327468513|gb|EGF13993.1| metallo-beta-lactamase [Dialister micraerophilus DSM 19965] Length = 553 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 295/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGG+GE+G NM + Y + +++D G++FP +++PG+D+V PD ++ Sbjct: 1 MAKSRLQIIPLGGLGEVGKNMMVIRY----EDEIVVVDSGLAFPTENMPGIDIVIPDFSY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + A+ ITH HEDH GAL L ++VPVY + GL+E K + ++ Sbjct: 57 LIENKDKVKAVLITHGHEDHIGALPYLLKEINVPVYGTKLTCGLIEGKLIEAQIKNYKLN 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +AGD+ +G F V HSIP+ + IR+PVG IVHTGD+K D TD Sbjct: 117 VV-KAGDEFKLGLFKCGFFHVCHSIPDACGVFIRTPVGTIVHTGDFKFDHTPKDELQTDL 175 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+LAL DSTNA G SE + K++ D AKG ++V TF+S+VSR+ Sbjct: 176 YKLAELGHRGVLALCADSTNAECPGHTPSEAVVAKSLMDQFSLAKGRIIVATFASNVSRL 235 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ID A RK+ G S+ V+ A+D+G +K + + E YP Q+ ++ T Sbjct: 236 QMAIDAAIAHRRKVCAFGRSMVNVIGKALDMGYLKAPEGTIIEPEEMNRYPESQICILTT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP + L++++ G R V + DTVI S+ IPGNE ++G+ N+L+ G++V+ Sbjct: 296 GSQGEPMAGLSRMADGSHRQVTVHSGDTVIISASPIPGNENSVGNTINKLMRMGIKVVTN 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL--ALQEGIACVPPVR 417 + VHVSGH DLK M ++P+ + IHGE L H E+ L Sbjct: 356 KST-RVHVSGHASEEDLKTMLSLVKPKFFIPIHGEFRMLYKHAEIATILGMPKKNSLVAE 414 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ L + +I +V G DG +G ++ + R+QLS G + V + L+ Sbjct: 415 NGSVIELTRNSAKITGKVQAGAIYVDGLGVGDVGNIVLRDRQQLSEDGVVIVVISLEKGS 474 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y D + V ++ + K+ LL+ I +L Sbjct: 475 NRLLAGPDIVTRGF-VYVRDSESLLNEAKARVEKSLDYCEKRNIKEWNLLKTQIRDSLGK 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 534 YFYERTKRRPMILPVIQEV 552 >gi|125973817|ref|YP_001037727.1| hypothetical protein Cthe_1302 [Clostridium thermocellum ATCC 27405] gi|256004267|ref|ZP_05429249.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281417974|ref|ZP_06248994.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum JW20] gi|125714042|gb|ABN52534.1| conserved hypothetical protein [Clostridium thermocellum ATCC 27405] gi|255991701|gb|EEU01801.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281409376|gb|EFB39634.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum JW20] gi|316939989|gb|ADU74023.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum DSM 1313] Length = 555 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 195/558 (34%), Positives = 316/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GEIG N+ ++ YG ++DCG++FP+DD+ G+DLV PDI+++ Sbjct: 4 KKRKLKVIPLGGLGEIGKNITVFEYG----DDIFVVDCGIAFPEDDMLGIDLVIPDISYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K R+ + I +TH HEDH GAL + L+VPVY + +GLLE K + + Sbjct: 60 TKNREKVRGIVLTHGHEDHIGALPYVLKDLNVPVYGTKLTLGLLEQKLEEHGLLNNVVLN 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D +++G F +E +R HSI ++ AL I +PVG I HTGD+K+D I G+ D Sbjct: 120 VVKHSDVIELGCFKVEFIRSTHSIADSTALAIFTPVGTIFHTGDFKIDYTPIEGEPIDLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G +G+L LMCDSTN REG +SEK + + +I NAK +LV TF+S+V RI+ Sbjct: 180 RLAELGKKGVLLLMCDSTNVEREGYTMSEKTVGETFDEIFMNAKNRILVATFASNVHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++ A + GRKI + G S+ VV+VA+++G + + L + + YP E++++I TG Sbjct: 240 QIVNAAIKFGRKIAICGRSMVNVVNVAMELGYMNVPEGLIIDIDHINKYPPEKIVIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ G+ + V++ D VI S+ IPGNE + + N L ++G VI E Sbjct: 300 SQGEPMSALTRMASGDHKKVEIIPGDLVIISANPIPGNEKLVSRVVNDLFKKGAEVIYES 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH +LK +++ IRP+ + +HGE HL H LA++ G+ + + Sbjct: 360 L-ADIHVSGHASQEELKLIHRLIRPKYFMPVHGEYRHLKRHANLAVELGMSPENIFIMDI 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 GK+L L D +I V G L DG +G ++ + R+ LS G + V + ++ Sbjct: 419 GKVLELTNDSAKINGSVNAGRVLVDGLGVGDVGNIVLRDRKHLSQDGLIVVVITIEGDTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 N+ P+++ G Y + + + + + + ++ D + I ALR Sbjct: 479 NVIAGPDVISRGF-VYVRESEDLMEEIREVCKAALQKCNDKKKNDWSTKKSIIRDALRDF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYERTKRRPMILPIIMEV 555 >gi|307265206|ref|ZP_07546765.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919828|gb|EFN50043.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] Length = 554 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 310/557 (55%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ +G I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 4 KAKLKIIPLGGLNEIGKNMTVFEFG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VPVY + IGL+E K + K I+ Sbjct: 60 KNREKVKAIVLTHGHEDHIGALPYVLKQLNVPVYGTRLTIGLVEYKLKEHGILKDSKLIT 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + V++G F +E +R +HSI ++ AL I +PVG + H+GD+K+D I G++ D Sbjct: 120 VKPREIVEIGQFKVEFIRTSHSIADSAALAIHTPVGTVFHSGDFKVDFTPIGGEIPDLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + I + A+ ++V TF+S++ R++ Sbjct: 180 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDSIFRKAEQRIIVATFASNIHRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 IID A + GRK+ + G S+ VV+VA+++G + D L + + P +++++I TGS Sbjct: 240 IIDSAHKYGRKVAISGRSMLNVVNVAMELGYLIVPDGLLIDIDEANKLPHDKVVIITTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V++ DTVI S+ AIPGNE I + N+L ++G VI E Sbjct: 300 QGEPMSALTRMASSEHKKVEIVPGDTVIISASAIPGNEKLISRVINQLFKKGANVIYEAL 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 360 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAETLGMPPQNIFVVDNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L + I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 419 TVLEFTKNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGG 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + + + V + + + ++ I L S L Sbjct: 479 IIAGPDIISRGF-VYVRESEDLMEESKNIVRDVLSKCEKEEVNEWATIKSMIKDNLSSFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 YEKTKRNPMILPIIMEI 554 >gi|326390162|ref|ZP_08211723.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] gi|325993810|gb|EGD52241.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] Length = 554 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 310/557 (55%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ +G I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 4 KAKLKIIPLGGLNEIGKNMTVFEFG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VPVY + IGL+E K + K I+ Sbjct: 60 KNREKVKAIVLTHGHEDHIGALPYVLKQLNVPVYGTRLTIGLVEYKLKEHGILKDSKLIT 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + V++G F +E +R +HSI ++ AL I +PVG + H+GD+K+D I G++ D Sbjct: 120 VKPREIVEIGQFKVEFIRTSHSIADSAALAIHTPVGTVFHSGDFKVDFTPIGGEIPDLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + I + A+ ++V TF+S++ R++ Sbjct: 180 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDSIFRKAEQRIIVATFASNIHRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 IID A + GRK+ + G S+ VV+VA+++G + D L + + P +++++I TGS Sbjct: 240 IIDSAHKYGRKVAISGRSMLNVVNVAMELGYLIVPDGLLIDIDEANKLPHDKVVIITTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V++ DTVI S+ AIPGNE I + N+L ++G VI E Sbjct: 300 QGEPMSALTRMASSEHKKVEIVPGDTVIISASAIPGNEKLISRVINQLFKKGANVIYEAL 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 360 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAETLGMPPPNIFVVDNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L + I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 419 TVLEFTKNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGG 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + + + V + + + ++ I L S L Sbjct: 479 IIAGPDIISRGF-VYVRESEDLMEESKNIVRDVLSKCEKEEVSEWATIKSMIKDNLSSFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 YEKTKRNPMILPIIMEI 554 >gi|253573583|ref|ZP_04850926.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251847111|gb|EES75116.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 559 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 181/560 (32%), Positives = 286/560 (51%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + NE+L LGGV EIG NM + Y ++ID G+ FP++D+ G+D+V PDIT+ Sbjct: 5 INNEKLTIFALGGVAEIGKNMYVVQYA----NDIVVIDSGLKFPEEDMLGIDIVIPDITY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + I +TH HEDH G L + L+VPVY + +GL+E K + + Sbjct: 61 LTENRDKVRGIVLTHGHEDHIGGLPYVLKNLNVPVYGTKLTLGLVENKLKEAGLLGETKR 120 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + A +++G R NHSIP+++ + I +P GN+VHTGD+K D + D Sbjct: 121 VLINADSVIELGTTMKASFFRTNHSIPDSVGVCIETPEGNVVHTGDFKFDHTPVNDQYAD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + IG G+LAL+ DSTNA R G SEK + + DI AK V+V TF+S+V R Sbjct: 181 LHRMGEIGKNGVLALLSDSTNAERPGFTPSEKNVGIVLSDIFHKAKQRVVVATFASNVHR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ +ID A RK+ ++G S+ VV++A ++G + D + + E ++++++ Sbjct: 241 IQQVIDAAHATNRKLTIIGRSMVNVVTIAEELGYLNVPDGIIIEPEEVNKMAADRVVILC 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++R R V + DTVI ++ +PGNE +G + L G VI Sbjct: 301 TGSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPVPGNEKYVGRTIDELFRLGAEVIY 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +LK M +RP+ + IHGE L H L GI + + Sbjct: 361 SGSNSGVHVSGHGSQEELKLMLNLMRPKYFIPIHGEYRMLRKHALLGESVGIDPDNIFLI 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G + + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 421 DIGDTIEIQNGVARKAGKVPAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ 480 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + + + + V +T+ L + L+ ++ AL Sbjct: 481 DGTIVSGPDIISRGF-VYVRESEGLLEEANRIVSSTLEKLMSENVNEWASLKTNVKDALG 539 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 RFLYEQTRRRPMILPIIMEV 559 >gi|158320689|ref|YP_001513196.1| beta-lactamase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140888|gb|ABW19200.1| beta-lactamase domain protein [Alkaliphilus oremlandii OhILAs] Length = 554 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 185/558 (33%), Positives = 306/558 (54%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ EIG NM + Y I+IDCG+SFP+DD+ G+D+V PDIT++ Sbjct: 4 KAEKIKIIPLGGLSEIGRNMTAFEY----KDDIIIIDCGLSFPEDDMLGIDIVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + I +TH HEDH GAL + L+VPVY + +GL+E K ++S Sbjct: 60 IKNKDKVKGIVLTHGHEDHIGALPYVLKKLNVPVYGTRLTLGLVEIKIKEHKLSDIQLQK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G V +G F +E +R +HS+P++ A+ + + +G I HTGD+K+D I G V D Sbjct: 120 V-DVGQMVQLGEFEVEFIRTSHSMPDSCAIALHTSLGVIFHTGDFKIDYTPIDGQVIDLH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L +M DSTN R G +SE + +I +NA+ ++V TF+S+V R++ Sbjct: 179 RIAELGKKGVLVMMADSTNVERPGYTMSESNVGATFENIFRNAENRIIVATFASNVHRVQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A RK+V+ G S+ V++VA D+G++ + L + Y ++ ++ TG Sbjct: 239 QVLDAAYNYDRKVVVSGRSMVNVIAVAQDLGVLNVPEGLIIDVNDMDQYDDNRITILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ E R + + + D V+FSS IPGNE +I + N+L E+G VI E Sbjct: 299 SQGEPMAALSRMASSEHRKLNIQQGDLVVFSSSPIPGNEKSITRVINQLFEKGAEVIYES 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH +LK M++ ++P+ + +HGE HL H +LA + +N Sbjct: 359 FE-DVHVSGHACQEELKLMHRLVKPKYFIPVHGEYKHLKQHAKLAESLGMPKENIFIGQN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + D +I V G L DG +G ++ + R+ L+ G + V V + Sbjct: 418 GTVFEFGSDYGKINGSVQSGKILVDGLGVGDVGNIVLRDRKHLAEDGLMVVVVTIAKENG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I +I+ G Y + + K V + + Q ++ LL+ SI +L+ Sbjct: 478 KIAAGLDIISRGF-VYVRESEDLIDEARKVVKSVLDGCEQQNIREWSLLKSSIRDSLKDF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYEKTKRRPMILPVIMEV 554 >gi|289578248|ref|YP_003476875.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] gi|297544528|ref|YP_003676830.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527961|gb|ADD02313.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] gi|296842303|gb|ADH60819.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 554 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 184/557 (33%), Positives = 311/557 (55%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ EIG NM ++ +G I++DCG++FP D++ G+DLV PDIT+++ Sbjct: 4 KAKLKIIPLGGLNEIGKNMTVFEFG----NDIIVVDCGLAFPDDEMLGIDLVIPDITYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R+ + AI +TH HEDH GAL + L+VPVY + IGL+E K + + K I+ Sbjct: 60 KNREKVKAIILTHGHEDHIGALPYVLKQLNVPVYGTRLTIGLVEYKLKEQGLLKDSKLIT 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + +++G F +E +R +HSI ++ AL I + VG + H+GD+K+D I G+V D Sbjct: 120 VKPREIIEIGQFKVEFIRTSHSIADSAALAIHTAVGTVFHSGDFKIDFTPIGGEVPDLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G +G+L ++CDSTN R G +SE+ + + ++ + A+ ++V TF+S++ R++ Sbjct: 180 FAQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDNLFRKAERRIIVATFASNIHRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 II+ A + GRK+ + G S+ VV+VA+++G + D L + + P +++++I TGS Sbjct: 240 IINSAHKYGRKVAISGRSMLNVVNVAMELGYLIVPDGLLVDIDEANKLPYDKVVIITTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + +++ DTVI S+ AIPGNE I + N+L ++G VI E Sbjct: 300 QGEPMSALTRMASSEHKKLEIVPGDTVIISASAIPGNEKLISRVINQLFKKGADVIYETL 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH ++K ++ I+P+ + +HGE HLV H +LA G+ + V NG Sbjct: 360 -ADIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAESLGMPPQNIFVVDNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +L + I V G L DG +G ++ + R+ L+ G L V V + Sbjct: 419 TVLEFTRNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGG 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + + + V + + + ++ I L S L Sbjct: 479 IIAGPDIISRGF-VYVRESEDLMEDSKNIVRDVLSKCEKEEISEWATIKSMIKDNLSSFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 YEKTKRNPMILPIIMEI 554 >gi|78043054|ref|YP_360002.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995169|gb|ABB14068.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 554 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 186/559 (33%), Positives = 309/559 (55%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K+ L +PLGG+GEIG NM + Y + I+ID G+ FP+++L G+D+V PD+++ Sbjct: 3 IKDGRLQIIPLGGLGEIGKNMMVIKY----NDAIIVIDAGLMFPEEELLGIDMVIPDMSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + A+ +TH HEDH G + VPVY + +GLL AK + + Sbjct: 59 LIENKEKVKAVLLTHGHEDHIGGMPYFLKQFDVPVYGTRLTLGLLSAKLKEAGI-PRASL 117 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D +++G F IE ++V+HSIP+T+ + + +PVG +VHTGD+KLD + G VTD Sbjct: 118 NVVAPRDVLNIGPFKIEFIKVSHSIPDTVGIAVHTPVGTVVHTGDFKLDPTPVDGKVTDF 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G +G+L LM DSTNA R G +SEK + + + A+G +++ TF+S+V R+ Sbjct: 178 YKLAELGEKGVLVLMSDSTNAERPGFTLSEKTVGNTFEETFRVAEGRIIIATFASNVHRL 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I A + RK+ ++G S+ VV +A ++G + D L + + YP +Q++++ T Sbjct: 238 QQAIYTAHKFKRKVAIVGRSMLNVVEIANELGYLDIPDGLLIDVDEINRYPHKQVVILTT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ E R V++ DTVI S+ IPGNE + I ++L + G +VI E Sbjct: 298 GSQGEPMSALTRMAMSEHRQVEIVAGDTVIISAMPIPGNEKLVSRIIDQLFKLGAKVIYE 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGHP +LK M ++P+ V IHGE HL+ H E+A + GI + V Sbjct: 358 AV-SGIHVSGHPSQEELKLMINLLKPKYFVPIHGEYRHLIKHAEIARELGIKPQNIFVVE 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG++L + +V G L DG +G ++ + R+QL+ G + V + L+ Sbjct: 417 NGQVLEFTKKSGRLAGKVPAGRVLVDGLGVGDVGNIVLRDRKQLAQDGIIIVVLTLNRES 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+IV G Y + ++ + V + + ++ + AL Sbjct: 477 GEIVAGPDIVTRGF-VYVRESEQLIDEAKQKVTEALNKCFNHGLLEWSAIKSQVRDALGK 535 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 536 YLFEKTRRRPMILPIIMEI 554 >gi|254519277|ref|ZP_05131333.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226913026|gb|EEH98227.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 555 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 188/561 (33%), Positives = 305/561 (54%), Gaps = 12/561 (2%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKNE+ + +PLGG+ EIG N+ Y ++IDCG+ FP +D+ G+DLV PDI Sbjct: 1 MKNEKAKVKIIPLGGINEIGKNITAIEY----KNDIVVIDCGLKFPDEDMFGIDLVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L VPVY + +G++E K + Sbjct: 57 SYLLKNKDKIRGIFLTHGHEDHIGALPYVLRQLDVPVYGTKLTLGIVETKLKEHGLLSST 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E ++ NHSI +++A+ I +P+G ++HTGD+K+D I G+ Sbjct: 117 ELIRVKPRDVIKLNSVSVEFIKTNHSIADSVAIAIHTPLGVVLHTGDFKIDYTPIDGEPM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D IG G+LA+M DSTN + G +SEK + ++ + AKG ++V TF+S+V Sbjct: 177 DFARFAEIGKRGVLAMMADSTNVEKPGYTMSEKVVGESFARLFSKAKGRIIVATFASNVH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVI 297 RI+ IID A GRK+ + G S++ +V+VA ++G + + + +S + Y +++++I Sbjct: 237 RIQQIIDAASMHGRKVAVSGRSMENIVAVAAELGYLEFEKDILVSIDQINKYTNDKVVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E R V + E DTVI S+ IPGNE + + N+L ++G VI Sbjct: 297 TTGSQGEPMSALARMASSEHRKVNIVEGDTVIISATPIPGNEKLVSKVINQLFQKGAEVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 + +HVSGH +LK M ++P+ + +HGE HL H ELA+ V Sbjct: 357 YKSL-AEIHVSGHACQEELKLMQCLVKPKFFIPVHGEYRHLKQHGELAISLGMPEENVII 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + I+ V G DG +G ++ + R+ LS G L+V V L Sbjct: 416 PENGGVIEVNRSTIKRNGSVNSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTLSK 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 N + P+I+ G Y + + + V + + D L+ + L Sbjct: 476 ENNSVIAGPDIISRGF-VYVRESEGLMDEAKEIVKDALRQCEENNITDWASLKSKVRDEL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R L + +KP++ I +I Sbjct: 535 RGYLYEKTKRKPMILPIIMEI 555 >gi|168207857|ref|ZP_02633862.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|169343772|ref|ZP_02864771.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169298332|gb|EDS80422.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|170660833|gb|EDT13516.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] Length = 555 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 191/561 (34%), Positives = 315/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEELV--FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK E+L +PLGG+ EIG N+ + + I++DCG+ FP +D+ G+D+V PD+ Sbjct: 1 MKREKLKVKIIPLGGLNEIGKNLTVIEF----KDDIIVVDCGLKFPDEDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLVKNAEKVRGIFLTHGHEDHIGALPYVLKNLNVPVYGTKLTLGIVETKLKEHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E V+ NHSI +++A+ + +P+G ++HTGD+K+D G+V Sbjct: 117 ELIRVKPRDIIKLKSSSVEFVKTNHSIADSVAIAVHTPLGVVLHTGDFKVDYTPTDGEVM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA+M DSTN R G +SE+ + +N+ I AKG +++ TF+S++ Sbjct: 177 DFARFAELGRKGVLAMMADSTNVERPGYTMSERAVGENLKKIFVGAKGRIIIATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL-FLSDESFGLYPREQLIVI 297 RI+ I++ AE GRKI + G S++ +V VAI++G + D+ F+S +S YP EQ+ +I Sbjct: 237 RIQQIVEAAEMTGRKIAVSGRSMENIVQVAIELGYLTIDKESFVSIDSINKYPNEQVTII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + V + E DTVI S+ IPGNE + + N+L ++G V+ Sbjct: 297 TTGSQGEPMSALARMASSEHKKVNIIEGDTVILSATPIPGNEKLVSKVINQLFKKGAEVV 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VHVSGH +LK M ++P+ + +HGE HL H ELA+ G+ Sbjct: 357 YGKL-ADVHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKQHAELAVDVGLSEKNFMI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V G DG +G ++ + R+ LS G L+V V + Sbjct: 416 AENGDVIEITRDSIKKNGSVTSGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTISK 475 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P+I+ G Y + + + V + D + D ++ +I L Sbjct: 476 ETASVVAGPDIISRGF-VYVRESEDLMDEAKEIVKDVLRDCEKKGICDWATMKSNIRDGL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 RS L + +KP++ I +I Sbjct: 535 RSFLYEKTKRKPMILPIIMEI 555 >gi|110799451|ref|YP_696461.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|168211400|ref|ZP_02637025.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|168214252|ref|ZP_02639877.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|168218246|ref|ZP_02643871.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|110674098|gb|ABG83085.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|170710636|gb|EDT22818.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|170714303|gb|EDT26485.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|182379742|gb|EDT77221.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 555 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 190/561 (33%), Positives = 313/561 (55%), Gaps = 12/561 (2%) Query: 1 MKNEELV--FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK E+L +PLGG+ EIG N+ + + I++DCG+ FP +D+ G+D+V PD+ Sbjct: 1 MKREKLKVKIIPLGGLNEIGKNLTVIEF----KDDIIVVDCGLKFPDEDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLVKNAEKVRGIFLTHGHEDHIGALPYVLKNLNVPVYGTKLTLGIVETKLKEHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E V+ NHSI +++A+ + +P+G ++HTGD+K+D G+V Sbjct: 117 ELIRVKPRDIIKLKSSSVEFVKTNHSIADSVAIAVHTPLGVVLHTGDFKVDYTPTDGEVM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA+M DSTN R G +SE+ + +N+ I AKG +++ TF+S++ Sbjct: 177 DFARFAELGRKGVLAMMADSTNVERPGYTMSERAVGENLKKIFVGAKGRIIIATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ I++ AE GRKI + G S++ +V VAI++G + F+S +S YP EQ+ +I Sbjct: 237 RIQQIVEAAEMTGRKIAVSGRSMENIVQVAIELGYLTIDKDSFVSIDSINKYPNEQVTII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + V + E DTVI S+ IPGNE + + N+L ++G V+ Sbjct: 297 TTGSQGEPMSALARMASSEHKKVNIIEGDTVILSATPIPGNEKLVSKVINQLFKKGAEVV 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VHVSGH +LK M ++P+ + +HGE HL H ELA+ G+ Sbjct: 357 YGKL-ADVHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKQHAELAVDVGLSEKNFMI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V G DG +G ++ + R+ LS G L+V V + Sbjct: 416 AENGDVIEITRDSIKKNGSVTSGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTISK 475 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P+I+ G Y + + + V + D + D ++ +I L Sbjct: 476 ETASVVAGPDIISRGF-VYVRESEDLMDEAKEIVKDVLRDCEKKGICDWATMKSNIRDGL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 RS L + +KP++ I +I Sbjct: 535 RSFLYEKTKRKPMILPIIMEI 555 >gi|182625684|ref|ZP_02953453.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177909086|gb|EDT71561.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 555 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 190/561 (33%), Positives = 313/561 (55%), Gaps = 12/561 (2%) Query: 1 MKNEELV--FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK E+L +PLGG+ EIG N+ + + I++DCG+ FP +D+ G+D+V PD+ Sbjct: 1 MKREKLKVKIIPLGGLNEIGKNLTVIEF----KDDIIVVDCGLKFPDEDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLVKNAEKVRGIFLTHGHEDHIGALPYVLKNLNVPVYGTKLTLGIVETKLKEHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E V+ NHSI +++A+ + +P+G ++HTGD+K+D G+V Sbjct: 117 ELIRVKPRDIIKLKSSSVEFVKTNHSIADSVAIAVHTPLGVVLHTGDFKVDYTPTDGEVM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA+M DSTN R G +SE+ + +N+ I AKG +++ TF+S++ Sbjct: 177 DFARFAELGRKGVLAMMADSTNVERPGYTMSERAVGENLKKIFVGAKGRIIIATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ I++ AE GRKI + G S++ +V VAI++G + F+S +S YP EQ+ +I Sbjct: 237 RIQQIVEAAEMTGRKIAVSGRSMENIVQVAIELGYLTIDKDSFVSIDSINKYPNEQVTII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + V + E DTVI S+ IPGNE + + N+L ++G V+ Sbjct: 297 TTGSQGEPMSALARMASSEHKKVNIIEGDTVIVSATPIPGNEKLVSKVINQLFKKGAEVV 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VHVSGH +LK M ++P+ + +HGE HL H ELA+ G+ Sbjct: 357 YGKL-ADVHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKQHAELAVDVGLSEKNFMI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V G DG +G ++ + R+ LS G L+V V + Sbjct: 416 AENGDVIEITRDSIKKNGSVTSGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTISK 475 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P+I+ G Y + + + V + D + D ++ +I L Sbjct: 476 ETASVVAGPDIISRGF-VYVRESEDLMDEAKEIVKDVLRDCEKKGICDWATMKSNIRDGL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 RS L + +KP++ I +I Sbjct: 535 RSFLYEKTKRKPMILPIIMEI 555 >gi|323705260|ref|ZP_08116835.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535162|gb|EGB24938.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] Length = 556 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 303/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L +PLGG+ EIG NM + YG I+IDCG++FP D++ G+DLV PDI+++ Sbjct: 5 NKTKLKIIPLGGLNEIGKNMTVIEYG----NDIIVIDCGLAFPDDEMLGIDLVIPDISYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + AI +TH HEDH GAL + L+VPVY + +GL+E K + + + Sbjct: 61 LKNKEKVKAIVLTHGHEDHIGALPYVLRQLNVPVYGTRLTLGLVEYKLKENGLLRDSKLV 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + V G +E +R +HSI ++ AL I +PVG + H+GD+K+D I G+V D Sbjct: 121 TVKPRETVTFGQLRVEFIRTSHSIADSAALAIHTPVGVVFHSGDFKIDFTPIGGEVADFH 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L +MCDSTN R G +SEK + +I + A+ ++V TF+S++ R++ Sbjct: 181 RFAELGEQGVLVMMCDSTNIERPGYTMSEKTVGDTFDNIFRKAEQRIIVATFASNIHRVQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID A + GRK+ + G S+ V++VA ++G + + + + P ++++I TG Sbjct: 241 QIIDSAYKYGRKVSISGRSMINVINVANELGYLSIPEGTLIDIDEANKLPYGEVVIITTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E + V++ DTV+ S+ AIPGNE I + N+L ++G VI + Sbjct: 301 SQGEPMSALTRMASSEHKKVEIVPGDTVVISASAIPGNEKLISRVINQLFKKGAEVIYDA 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH ++K ++ IRPQ + +HGE HL H +LA G+ + N Sbjct: 361 L-ADVHVSGHACQEEIKLLHTLIRPQFFIPVHGEYRHLKQHAKLAEDLGMDPKNIFIADN 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + I V G L DG +G ++ + R+ LS G L V V + Sbjct: 420 GTVIEFTKNSGRIAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLSQDGLLVVVVTISKEKG 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + + V T+ + + ++ I L S Sbjct: 480 SVIAGPDIISRGF-VYVRESEDLMEEAKNLVKETLSQCEKDDITEWSSIKTMIKECLSSF 538 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ I +I Sbjct: 539 LYEKTKRNPMILPIIMEI 556 >gi|317471882|ref|ZP_07931217.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316900655|gb|EFV22634.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 648 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 191/559 (34%), Positives = 307/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+G+IGMN+ + Y + +++DCGV+FP D++ G+DLV PD+T++ Sbjct: 99 NTGTVKIIPLGGLGQIGMNITAFEY----NNNILIVDCGVAFPDDEMLGIDLVIPDVTYL 154 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + K + + ITH HEDH GA+ + L++PVYA+ +GL++ K + K++ Sbjct: 155 KENAKKIKGLVITHGHEDHIGAIPYIEKQLNIPVYATKLTMGLIDNKLKEHGLLKQVKKT 214 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + GD + +G F++E ++ NHSI + AL I +P G I+HTGD+K+D + G+ D Sbjct: 215 VVKHGDVIKLGVFTVEFIKTNHSIADAAALAIHTPAGLIIHTGDFKIDHTPLFGEAIDLA 274 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +G EG+LALM DSTNA R G SEK + K + + KG +LV TF+S+V R+ Sbjct: 275 RFAELGREGVLALMADSTNAERPGYTQSEKNVGKTLDSLFAAHPKGRILVATFASNVDRV 334 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+ + G S+ +++ A ++G IK + + P +Q+++I T Sbjct: 335 QQIINSAYKHGRKVAVEGRSMVNIIATASELGYIKIPKNTLIETDQMRNVPDDQIVMITT 394 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R V + DT++FSS IPGNE + +I N L +G +V+ + Sbjct: 395 GSQGETMAALSRMANGTHRKVSIKPTDTIVFSSSPIPGNEKNVSNIMNELAMKGAKVVFQ 454 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +++ +Y +PQ + +HGE HLV H ELAL+ GI V + Sbjct: 455 ----DTHVSGHACREEIRLIYALTKPQYAIPVHGEYRHLVRHSELALEMGIPKENVFVME 510 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L L ++ +V L DG IG ++ + RRQLS G + V V L+ H Sbjct: 511 EGDVLELNKKAGKVTGKVPAQGILVDGLGIGDVGNIVLNDRRQLSQNGLIIVTVTLEKHG 570 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N I P+IV G Y + + + + V V D L+ I L + Sbjct: 571 NSILAGPDIVSRGF-VYVRESESLMEGARQVVEDAVEGCLTKNITDWGKLKSCIRDTLSN 629 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K + P++ I ++ Sbjct: 630 YIWKKTKRDPMILPIITEV 648 >gi|18310757|ref|NP_562691.1| hypothetical protein CPE1775 [Clostridium perfringens str. 13] gi|18145438|dbj|BAB81481.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 581 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 191/561 (34%), Positives = 315/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEELV--FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK E+L +PLGG+ EIG N+ + + I++DCG+ FP +D+ G+D+V PD+ Sbjct: 27 MKREKLKVKIIPLGGLNEIGKNLTVIEF----KDDIIVVDCGLKFPDEDMFGIDIVIPDV 82 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 83 SYLVKNAEKVRGIFLTHGHEDHIGALPYVLKNLNVPVYGTKLTLGIVETKLKEHGLLSTT 142 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E V+ NHSI +++A+ + +P+G ++HTGD+K+D G+V Sbjct: 143 ELIRVKPRDIIKLKSSSVEFVKTNHSIADSVAIAVHTPLGVVLHTGDFKVDYTPTDGEVM 202 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA+M DSTN R G +SE+ + +N+ I AKG +++ TF+S++ Sbjct: 203 DFARFAELGRKGVLAMMADSTNVERPGYTMSERAVGENLKKIFVGAKGRIIIATFASNIH 262 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL-FLSDESFGLYPREQLIVI 297 RI+ I++ AE GRKI + G S++ +V VAI++G + D+ F+S +S YP EQ+ +I Sbjct: 263 RIQQIVEAAEMTGRKIAVSGRSMENIVQVAIELGYLTIDKESFVSIDSINKYPNEQVTII 322 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + V + E DTVI S+ IPGNE + + N+L ++G V+ Sbjct: 323 TTGSQGEPMSALARMASSEHKKVNIIEGDTVILSATPIPGNEKLVSKVINQLFKKGAEVV 382 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VHVSGH +LK M ++P+ + +HGE HL H ELA+ G+ Sbjct: 383 YGKL-ADVHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKQHAELAVDVGLSEKNFMI 441 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V G DG +G ++ + R+ LS G L+V V + Sbjct: 442 AENGDVIEITRDSIKKNGSVTSGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTISK 501 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P+I+ G Y + + + V + D + D ++ +I L Sbjct: 502 ETASVVAGPDIISRGF-VYVRESEDLMDEAKEIVKDVLRDCEKKGICDWATMKSNIRDGL 560 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 RS L + +KP++ I +I Sbjct: 561 RSFLYEKTKRKPMILPIIMEI 581 >gi|167751548|ref|ZP_02423675.1| hypothetical protein EUBSIR_02549 [Eubacterium siraeum DSM 15702] gi|167655356|gb|EDR99485.1| hypothetical protein EUBSIR_02549 [Eubacterium siraeum DSM 15702] Length = 711 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 182/555 (32%), Positives = 302/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG N+ +Y +IDCG++FP DD+ GVDLV PD T++ K R Sbjct: 163 VRIMSLGGVNEIGKNIYVYECC----NDIFIIDCGLAFPDDDMLGVDLVIPDFTYLEKNR 218 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + I +TH HEDH GAL ++VPVY + +GL+E K + + Sbjct: 219 EKIRGIVLTHGHEDHIGALPYFLKKINVPVYGTRLTLGLVEGKLREHGILSQCSLNVVVP 278 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 V +G S+E +RVNHSIP+ A+ + +P G IVHTGD+K+D I G + D Sbjct: 279 RQNVRMGCMSVEFIRVNHSIPDACAMAVHTPAGVIVHTGDFKVDYTPIEGGIIDLARFGE 338 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +GN+G+LAL+ +STNA R G +E+ + ++ + A+G ++V TFSS++ RI+ II Sbjct: 339 LGNKGVLALLSESTNAERPGYTATERKVGESFKSLFAGAEGKRIIVATFSSNIHRIQQII 398 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + AE GRK+ + G S+ V++ AI++ IK + + E YP E++++I TGSQG Sbjct: 399 NNAESWGRKVAVSGRSMLNVLTTAIELNYIKVPQGMLVDIEDVNKYPPEKMVIITTGSQG 458 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++S G+ R V + D +I S+ IPGNE +G + N L++QG V+ E Sbjct: 459 EPLSALSRMSSGDHRQVSITPSDLIIISATPIPGNEKFVGKLVNELMKQGAEVVYEAM-Y 517 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH ++LK M +P+ + IHGE H+ H+ LA++ GI + + G++ Sbjct: 518 EVHVSGHACQDELKMMLALTKPKFFIPIHGEYKHMKKHEGLAIKMGIPEKNIFLLNIGQV 577 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + ++++ +V G L DG +G + + R+ LS G + V ++ + Sbjct: 578 VETDSVEMKVVGQVPAGKVLVDGLGVGDVGSVVLRDRKHLSEDGLIVVVTTINRETGMVA 637 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + ++ + V T+ ++ ++ ++ L + + + Sbjct: 638 AGPDIVSRGF-VYVRESEELMDEAKQLVKKTLQTCADRNIREWGNIKSNVRDELGNFIFQ 696 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 697 RTKRSPMILPIIMEV 711 >gi|304316720|ref|YP_003851865.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778222|gb|ADL68781.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 556 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 182/558 (32%), Positives = 303/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L +PLGG+ EIG NM + YG I+IDCG++FP D++ G+DLV PDI+++ Sbjct: 5 NKTKLKIIPLGGLNEIGKNMTVIEYG----NDIIVIDCGLAFPDDEMLGIDLVIPDISYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + AI +TH HEDH GAL + L+VPVY + +GL+E K + + + Sbjct: 61 LKNKEKVRAIVLTHGHEDHIGALPYVLRQLNVPVYGTRLTLGLVEYKLKENGLLRDSKLV 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + V G +E +R +HSI ++ AL I +P+G + H+GD+K+D I G+V D Sbjct: 121 TVKPRETVTFGQLKVEFIRTSHSIADSAALAIHTPIGTVFHSGDFKIDFTPIGGEVADFH 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L +MCDSTN R G +SEK + +I + A+ ++V TF+S++ R++ Sbjct: 181 RFAELGEQGVLVMMCDSTNIERPGYTMSEKTVGDTFDNIFRRAEQRIIVATFASNIHRVQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID A + GRK+ + G S+ V++VA ++G + + F+ + P ++++I TG Sbjct: 241 QIIDSAYKYGRKVSISGRSMINVINVANELGYLSIPEGTFIDIDEANKLPYSEVVIITTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E + V++ DTV+ S+ AIPGNE I + N+L ++G VI + Sbjct: 301 SQGEPMSALTRMASSEHKKVEIVPGDTVVISASAIPGNEKLISRVINQLFKKGAEVIYDA 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH ++K ++ I+PQ + +HGE HL H LA G+ + N Sbjct: 361 L-ADVHVSGHACQEEIKLLHTLIKPQFFIPVHGEYRHLKQHARLAEDLGMDPKNIFIADN 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + I V G L DG +G ++ + R+ LS G L V V + Sbjct: 420 GTVIEFTKNSGRIAGSVTAGKVLVDGLGVGDVGNIVLRDRKHLSQDGLLVVVVTISKEKG 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + + V T+ + + ++ I L S Sbjct: 480 SVIAGPDIISRGF-VYVRESEDLMEEAKNLVKGTLSQCEKDDITEWSSIKTMIKECLSSF 538 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ I +I Sbjct: 539 LYEKTKRNPMILPIIMEI 556 >gi|297617212|ref|YP_003702371.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus lipocalidus DSM 12680] gi|297145049|gb|ADI01806.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus lipocalidus DSM 12680] Length = 554 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 188/556 (33%), Positives = 306/556 (55%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + +PLGG+GEIG NM L Y ++ID G+ FP+++L G+D+V PD+T++ + Sbjct: 6 DRIYVIPLGGLGEIGKNMMLVRY----QDNIVVIDAGLMFPEEELLGIDIVIPDMTYLFE 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + A+ +TH HEDH GAL L + VP+Y + IG++EAK ++ I Sbjct: 62 NRDKVKAVLVTHGHEDHVGALPYLLREIDVPIYGTKLTIGIIEAKLREHGLTGARLNIV- 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + DK++VG E +RV+HSIP+T+A+ I SPVG I+HTGD+KLD + G+V D Sbjct: 121 KPRDKINVGPLEAEFIRVSHSIPDTLAIAIHSPVGTILHTGDFKLDQTPVDGEVVDFRKF 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G +G+L ++ DSTNA R G +SE+ + ++ +G +++TTF+S+V RI+ Sbjct: 181 AELGEKGVLLMLSDSTNAERPGYTMSERVVGNTFDELFGRCEGRIIITTFASNVHRIQQA 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A + RK+ ++G S+ V++A ++G I + + E YP QL+++ TGSQ Sbjct: 241 INTACKYNRKVAVVGRSMINNVNIARELGYIAIPEGTLVDVELINRYPDNQLVIVTTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL +++ E R V + DTVI S+ IPGNE + + L +QG V+ A Sbjct: 301 GEPMSALTRMATAEHRWVSIQPGDTVIISATPIPGNEKLVARTIDMLYKQGAEVVYGPAT 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +LK M IRP+ + IHGE HL H LA GI + V NG+ Sbjct: 361 G-VHVSGHASQEELKIMVNLIRPRYFIPIHGEYRHLKKHARLAENLGIPRSRIFVVENGQ 419 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ + +I +V G L DG +G ++ + R+QLS G + V V ++ + Sbjct: 420 VIEVGRKKAGVIGKVTSGRVLVDGLGVGDVGNIVLRDRKQLSSDGIIIVVVTINKETGTV 479 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + ++ + + V ++ + + ++ + AL L Sbjct: 480 IAGPDIVSRGF-VYVRESEQLIEEAREKVREALLVCEKKGATEWASIKSHVREALSKYLY 538 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 539 EKTKRRPMILPIIMEV 554 >gi|167747067|ref|ZP_02419194.1| hypothetical protein ANACAC_01779 [Anaerostipes caccae DSM 14662] gi|167654027|gb|EDR98156.1| hypothetical protein ANACAC_01779 [Anaerostipes caccae DSM 14662] Length = 663 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 191/559 (34%), Positives = 307/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+G+IGMN+ + Y + +++DCGV+FP D++ G+DLV PD+T++ Sbjct: 114 NTGTVKIIPLGGLGQIGMNITAFEY----NNNILIVDCGVAFPDDEMLGIDLVIPDVTYL 169 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + K + + ITH HEDH GA+ + L++PVYA+ +GL++ K + K++ Sbjct: 170 KENAKKIKGLVITHGHEDHIGAIPYIEKQLNIPVYATKLTMGLIDNKLKEHGLLKQVKKT 229 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + GD + +G F++E ++ NHSI + AL I +P G I+HTGD+K+D + G+ D Sbjct: 230 VVKHGDVIKLGVFTVEFIKTNHSIADAAALAIHTPAGLIIHTGDFKIDHTPLFGEAIDLA 289 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +G EG+LALM DSTNA R G SEK + K + + KG +LV TF+S+V R+ Sbjct: 290 RFAELGREGVLALMADSTNAERPGYTQSEKNVGKTLDSLFAAHPKGRILVATFASNVDRV 349 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+ + G S+ +++ A ++G IK + + P +Q+++I T Sbjct: 350 QQIINSAYKHGRKVAVEGRSMVNIIATASELGYIKIPKNTLIETDQMRNVPDDQIVMITT 409 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R V + DT++FSS IPGNE + +I N L +G +V+ + Sbjct: 410 GSQGETMAALSRMANGTHRKVSIKPTDTIVFSSSPIPGNEKNVSNIMNELAMKGAKVVFQ 469 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +++ +Y +PQ + +HGE HLV H ELAL+ GI V + Sbjct: 470 ----DTHVSGHACREEIRLIYALTKPQYAIPVHGEYRHLVRHSELALEMGIPKENVFVME 525 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L L ++ +V L DG IG ++ + RRQLS G + V V L+ H Sbjct: 526 EGDVLELNKKAGKVTGKVPAQGILVDGLGIGDVGNIVLNDRRQLSQNGLIIVTVTLEKHG 585 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N I P+IV G Y + + + + V V D L+ I L + Sbjct: 586 NSILAGPDIVSRGF-VYVRESESLMEGARQVVEDAVEGCLTKNITDWGKLKSCIRDTLSN 644 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K + P++ I ++ Sbjct: 645 YIWKKTKRDPMILPIITEV 663 >gi|226313003|ref|YP_002772897.1| hypothetical protein BBR47_34160 [Brevibacillus brevis NBRC 100599] gi|226095951|dbj|BAH44393.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 558 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 178/560 (31%), Positives = 293/560 (52%), Gaps = 11/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ++ LGGVGEIG NM + G ++ID G+ FP++++ G+D+V PDIT++ Sbjct: 4 SNHSVLVFALGGVGEIGKNMYVVQSG----DDIVVIDAGLKFPEEEMLGIDMVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + I ITH HEDH G L + L VPVYA+ +GL++AK + + + Sbjct: 60 EEHRDKVRGIIITHGHEDHIGGLSYVLKHLKVPVYATKLTLGLIDAKLKEAGILNETKRV 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +V +G RVNHSIP+ + + + +P G IVHTGD+K D + V D Sbjct: 120 LINSDSEVILGKMKATFFRVNHSIPDCVGVCLDTPEGYIVHTGDFKFDQTPVNNQVADLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+ G+L L+ DSTNA R G SE+ + K + D+ A G ++V+TF+S+V RI+ Sbjct: 180 KMAMIGDRGVLCLLSDSTNAERPGFTGSERSVGKALMDVFSKASGRIVVSTFASNVHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATG 300 ++D A Q RK+ ++G S++ V++++ D+G + + L + + P EQ+++++TG Sbjct: 240 QVVDAAAQFNRKLTVVGRSMQNVINISRDLGYLLVPEGLIVEIDEINKLPAEQVVILSTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA-- 358 SQGEP SAL +++R R + + DTVI ++ IPGNE + ++L G VI Sbjct: 300 SQGEPMSALTRMARSAHRKIDILPGDTVIIAATPIPGNEKYVARTIDQLSRIGADVIYGG 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 VHVSGH +L+ M ++P+ + +HGE L H LA Q GI + Sbjct: 360 HGPNGTVHVSGHGSQEELRLMLNLMKPKYFIPVHGEYRMLKTHALLADQVGIPEENTFLL 419 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 420 DNGDTVEFSGGKARYGGKVHAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I P+I+ G Y + ++ + V T+V + + L+ ++ +L Sbjct: 480 NGTILSGPDIISRGF-VYVRESEELLDEANRIVTQTLVKCMEENVNEWSSLKNNVKESLG 538 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 539 RYLYEQTRRRPMILPIIMEV 558 >gi|121535281|ref|ZP_01667095.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] gi|121306166|gb|EAX47094.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] Length = 554 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 314/558 (56%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +++ +PLGG+GEIG NM + YG ++ID G++FP+DD+ G+DLV PDIT++ Sbjct: 4 QPQKIQIIPLGGLGEIGKNMTVIRYG----DDILVIDSGLAFPEDDMLGIDLVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + AI +TH HEDH GAL + L+VPVY +P +G+LE + V+ + I Sbjct: 60 LENKDFVRAIVLTHGHEDHIGALPYVLKQLNVPVYGTPLTLGILEGRLRENNVAGE-KLI 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + GD++D+G F + +RV+HSI + +AL I++P+G IVHTGD+KLD + G VTD Sbjct: 119 SVKPGDQIDIGIFKVGFIRVSHSIADAVALSIKTPIGTIVHTGDFKLDQTPVDGKVTDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G++G+L L+ DSTNA R G SE+ + + + + +++ TFSS+V RI+ Sbjct: 179 KFAELGDQGVLVLLADSTNAERPGYTPSERSVGMTFDETFRTTRERIIIATFSSNVHRIQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ID A + RK+ +LG S+ VV++A+++G ++ + + + + YP ++++ TG Sbjct: 239 QAIDTACKYKRKVAILGRSMINVVNIALELGYLRVPEGVLIDIDEINNYPPSSIVIVTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + + V++ DTVI S+ IPGNE + + L QG V+ E Sbjct: 299 SQGEPMSALTRMAMSDHKKVEIMPGDTVIISATPIPGNEKLVARTVDYLFRQGAEVVYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 +HVSGH +LK M+ IRP+ V +HGE HL+ H +LA + + N Sbjct: 359 T-SGIHVSGHASQEELKLMHNLIRPKFFVPVHGEYRHLIKHAKLAQELGMPKENIFVTEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G +L + I ++ G L DG +G ++ + RRQLS G L + V +D Sbjct: 418 GSVLEFTREKGCIAGKITAGKVLVDGLGVGDVGNIVLRDRRQLSQDGILVMVVTMDKQRG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+IV G Y + ++ + V T+ + ++ ++ L Sbjct: 478 SILAGPDIVSRGF-VYVRESEQLMDEAKEKVRQTLEKCELNGVTEWASIKSNVRDVLGKF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYERTRRRPMILPIIMEV 554 >gi|110802419|ref|YP_699060.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110682920|gb|ABG86290.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 555 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 190/561 (33%), Positives = 313/561 (55%), Gaps = 12/561 (2%) Query: 1 MKNEELV--FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK E+L +PLGG+ EIG N+ + + I++DCG+ FP +D+ G+D+V PD+ Sbjct: 1 MKREKLKVKIIPLGGLNEIGKNLTVIEF----KDDIIVVDCGLKFPDEDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLVKNAEKVRGIFLTHGHEDHIGALPYVLKNLNVPVYGTKLTLGIVETKLKEHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E V+ NHSI +++A+ + +P+G ++HTGD+K+D G+V Sbjct: 117 ELIRVKPRDIIKLKSSSVEFVKTNHSIADSVAIAVHTPLGVVLHTGDFKVDYTPTDGEVM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA+M DSTN R G +SE+ + +N+ I AKG +++ TF+S++ Sbjct: 177 DFARFAELGRKGVLAMMADSTNVERPGYTMSERAVGENLKKIFIGAKGRIIIATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ I++ AE GRKI + G S++ +V VAI++G + F+S +S YP EQ+ +I Sbjct: 237 RIQQIVEAAEMTGRKIAVSGRSMENIVQVAIELGYLTIDKDSFVSIDSINKYPNEQVTII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + V + E DTVI S+ IPGNE + + N+L ++G V+ Sbjct: 297 TTGSQGEPMSALARMASSEHKKVNIIEGDTVILSATPIPGNEKLVSKVINQLFKKGAEVV 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VHVSGH +LK M ++P+ + +HGE HL H ELA+ G+ Sbjct: 357 YGKL-ADVHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKQHAELAVDLGLSEKNFMI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V G DG +G ++ + R+ LS G L+V V + Sbjct: 416 AENGDVIEITRDSIKKNGSVTSGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTISK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P+I+ G Y + + + V + D + D ++ +I L Sbjct: 476 EAASVVAGPDIISRGF-VYVRESEDLMDEAKEIVKCILRDCEKKGICDWATIKSNIRDGL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 RS L + +KP++ I +I Sbjct: 535 RSFLYEKTKRKPMILPIIMEI 555 >gi|291530328|emb|CBK95913.1| conserved hypothetical protein [Eubacterium siraeum 70/3] Length = 711 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 182/555 (32%), Positives = 302/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG N+ +Y +IDCG++FP DD+ GVDLV PD T++ K R Sbjct: 163 VRIMSLGGVNEIGKNIYVYECC----NDIFIIDCGLAFPDDDMLGVDLVIPDFTYLEKNR 218 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + I +TH HEDH GAL ++VPVY + +GL+E K + + Sbjct: 219 EKIRGIVLTHGHEDHIGALPYFLKKINVPVYGTRLTLGLVEGKLREHGILSQCSLNVVVP 278 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 V +G S+E +RVNHSIP+ A+ + +P G IVHTGD+K+D I G + D Sbjct: 279 RQNVRMGCMSVEFIRVNHSIPDACAMAVHTPAGVIVHTGDFKVDYTPIEGGIIDLARFGE 338 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +GN+G+LAL+ +STNA R G +E+ + ++ + A+G ++V TFSS++ RI+ II Sbjct: 339 LGNKGVLALLSESTNAERPGYTATERKVGESFKSLFAGAEGKRIIVATFSSNIHRIQQII 398 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + AE GRK+ + G S+ V++ AI++ IK + + E YP E++++I TGSQG Sbjct: 399 NNAESWGRKVAVSGRSMLNVLTTAIELNYIKVPQGMLVDIEDVNKYPPEKMVIITTGSQG 458 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++S G+ R V + D +I S+ IPGNE +G + N L++QG V+ E Sbjct: 459 EPLSALSRMSSGDHRQVSITPSDLIIISATPIPGNEKFVGKLVNELMKQGAEVVYEAM-Y 517 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH ++LK M +P+ + IHGE H+ H+ LA++ GI + + G++ Sbjct: 518 EVHVSGHACQDELKMMLALTKPKFFIPIHGEYKHMKKHEGLAIKMGIPEKNIFLLNIGQV 577 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + ++++ +V G L DG +G + + R+ LS G + V ++ + Sbjct: 578 VETDSVEMKVVGQVPAGKVLVDGLGVGDVGSVVLRDRKHLSEDGLIVVVTTINRETGMVA 637 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + ++ + V T+ ++ ++ ++ L + + + Sbjct: 638 AGPDIVSRGF-VYVRESEELMDDAKQLVKKTLQTCADRNIREWGNIKSNVRDELGNFIFQ 696 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 697 RTKRSPMILPIIMEV 711 >gi|310658786|ref|YP_003936507.1| ribonuclease j1 [Clostridium sticklandii DSM 519] gi|308825564|emb|CBH21602.1| ribonuclease J1 [Clostridium sticklandii] Length = 554 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 306/557 (54%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+ EIG NM + Y + I+IDCG+SFP+D++ G+D+V PDIT++ Sbjct: 4 KTSKLKIIPLGGLQEIGKNMTVIEY----KDEIIIIDCGLSFPEDEMLGIDIVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R+ + + +TH HEDH GA+ + L +P+Y AIGLLE K R+S + Sbjct: 60 IKNREKIKGLVLTHGHEDHIGAIPYVLKKLDIPIYGPNLAIGLLEIKLKEHRLSNNSLNV 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G K+ +G F +E VRV HSIP+ AL I + VG I HTGD+K+D I G V D Sbjct: 120 V-NPGSKIKLGNFEVEFVRVTHSIPDACALAITTGVGTIFHTGDFKVDYTPIDGQVMDLH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG++G+L +M +STN R G +SE + + +I A +L+ TF+S+V R++ Sbjct: 179 RIAEIGSKGVLLMMGESTNVERPGYTLSESNVGHTLDEIFSEATSRILIATFASNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A + GRK+ G S+ VV+VA ++G + + F+ + Y +L+++ TG Sbjct: 239 QIINAAYKNGRKVTTSGRSMVNVVNVARNLGYLNIPENTFIELKDINKYQDHELVIMTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E R +++ + D VIFS+ IPGNE + + N+L E+G VI E Sbjct: 299 SQGEPLSALTRMASQEHRQIEIKKGDLVIFSAHPIPGNEKLVSRVINQLFERGANVIYES 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 +HVSGH +LK M++ ++P+ + +HGE HL H ELA + V + N Sbjct: 359 I-SDIHVSGHACQEELKLMHRLVKPKFFIPVHGEYRHLKQHMELAKKLGMPEENVFMLSN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + D +I+ ++ G L DG +G ++ + R+ LS G + V V + Sbjct: 418 GCVFEIDKDQGKIVSKIPSGNILVDGLGVGDVGNIVLRDRKHLSEDGLMVVVVSMSKDTG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + + + + ++ ++ L+ +I LR+ Sbjct: 478 KVISGPDIISRGF-VYVRESEDLMDGAREVIKKSLETCENKNMREWSYLKNTIKDELRNY 536 Query: 538 LKKVWGKKPLVTVFINK 554 L + + P++ I + Sbjct: 537 LYEKTKRNPMILPIIME 553 >gi|260893524|ref|YP_003239621.1| beta-lactamase domain protein [Ammonifex degensii KC4] gi|260865665|gb|ACX52771.1| beta-lactamase domain protein [Ammonifex degensii KC4] Length = 553 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 175/557 (31%), Positives = 306/557 (54%), Gaps = 10/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+N L +PLGG+GEIG N G ++IDCG+ FP+++L G+D+V PD+++ Sbjct: 1 MRNGRLQIIPLGGLGEIGKNCMAVRCG----NDIVVIDCGLMFPEEELLGIDVVIPDVSY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R+ + AI +TH HEDH GAL + L+VPVY + +GLLE K + K Sbjct: 57 LVENRQMVRAIVLTHGHEDHIGALPYVLPQLNVPVYGTRLTLGLLEGKLEEQLPGFKADL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + D V+ G F +E +RV+HSIP+ +A+ + +P+G ++HTGD+K+D + G++ D Sbjct: 117 RVVKPRDVVECGCFKVEFIRVSHSIPDAVAVALHTPLGVVLHTGDFKVDHTPVDGELIDF 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G G+L L+ DSTNA G +SE+ + + ++ + ++G V++ TF++++ R+ Sbjct: 177 HRLAQLGERGVLVLLSDSTNAEHTGYTMSERVVGETFDEVFRRSRGRVIIATFATNIHRV 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I +A++ GRK+ + G S+ VVS+A +G + + + E PR Q+ ++ T Sbjct: 237 QQAILVAQRYGRKVAVAGRSMVNVVSIAHKLGYLNLPQGVMVELEEANRLPRHQVAILTT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ GE + +++ DT+I S+ IPGNE + + ++L ++G V+ E Sbjct: 297 GSQGEPMSALTRMATGEFKQLEIIPGDTIIISAVPIPGNEKLVARVVDQLFKRGAMVLYE 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGHP +LK M RP+ + +HGE L+ H ELA + G+ + Sbjct: 357 AVSA-VHVSGHPCQEELKLMINLTRPRYFIPVHGEYRMLIRHAELARELGLRPENIFVAE 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG+++ + P V G L DG +G ++ + R+QL+ G L V V L Sbjct: 416 NGQIIEITPKGGRFAGRVSAGRVLVDGLGVGDVGNIVLRDRKQLAQDGILIVVVALSQET 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + + + + V + + + + ++ + L Sbjct: 476 GQVVAGPDVISRGF-VYVREAEALMEEVKAQVRAILDRCIERKSLEWATIKSEVRETLSR 534 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 535 FLYERTRRRPMILPIIM 551 >gi|291543857|emb|CBL16966.1| conserved hypothetical protein [Ruminococcus sp. 18P13] Length = 686 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 295/560 (52%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + +PLGG+ EIG N+ + + +IDCG++FP D+ GVD+V PD T+ Sbjct: 132 LRKTPVRIIPLGGLNEIGKNLTVVE----CANDMFLIDCGLAFPDSDMLGVDIVIPDFTY 187 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + L + +TH HEDH G L L +++PVY + + L+E K R+ K+ Sbjct: 188 LERNVDKLRGVVLTHGHEDHIGGLAYLLKKINIPVYGTQLTLALVEGKLREHRLLGKVKL 247 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V G ++E +RVNHSIP+ + + I +P G IVHTGD+K+D I G++ D Sbjct: 248 NVVKPRQTVKFGCMAVEFIRVNHSIPDAVGMAIHTPAGVIVHTGDFKVDYTPINGEIIDL 307 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 +G++G+LAL+ DSTNA R G SE+ + ++ + A+G +++ TFSS++ R Sbjct: 308 ARFAELGSKGVLALLSDSTNAERPGFTPSERTVGESFEKLFAKAEGKRIIIATFSSNIHR 367 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ IID A + GRK+ + G S+ V++VAI++G + + + + Y E++++I Sbjct: 368 VQQIIDCAARYGRKVAIFGRSMVNVMTVAIELGYLTVPKGIIIDIDMMNRYESERIVLIT 427 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ + + V + +D +I S+ IPGNE + + N L++ G V+ Sbjct: 428 TGSQGEPMSALTRMAMNDHKKVTITPQDFIIISATPIPGNEKTVTKVVNELMKCGAEVVY 487 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E VHVSGH + K + +P+ + +HGE H K+LA+ GI + Sbjct: 488 ERM-YEVHVSGHACQEETKLILALTKPKFYMPVHGEYKHFKKQKQLAMDMGIPKENIIIG 546 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G ++ ++I+ +V G + DG +G + + R+ L+ G + V V++D Sbjct: 547 DIGNVIETDGVDMKIVSQVPAGRVMVDGLGVGDVGSIVLRDRKHLAEDGLIIVTVVIDKS 606 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+++ G Y + ++ + T+ ++ ++ + AL Sbjct: 607 IGEVVAGPDMISRGF-VYVRESEQLMDEARNLLSHTLASCTPQDFREWNSMKTKLRDALS 665 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ I++I Sbjct: 666 DFIFSKTKRSPMILPIISEI 685 >gi|291557141|emb|CBL34258.1| conserved hypothetical protein [Eubacterium siraeum V10Sc8a] Length = 711 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 182/555 (32%), Positives = 302/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG N+ +Y +IDCG++FP DD+ GVDLV PD T++ K R Sbjct: 163 VRIMSLGGVNEIGKNIYVYECC----NDIFIIDCGLAFPDDDMLGVDLVIPDFTYLEKNR 218 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + I +TH HEDH GAL ++VPVY + +GL+E K + + Sbjct: 219 EKIRGIVLTHGHEDHIGALPYFLKKINVPVYGTRLTLGLVEGKLREHGILSQCSLNVVVP 278 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 V +G S+E +RVNHSIP+ A+ + +P G IVHTGD+K+D I G + D Sbjct: 279 RQNVRMGCMSVEFIRVNHSIPDACAMAVHTPAGVIVHTGDFKVDYTPIEGGIIDLARFGE 338 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +GN+G+LAL+ +STNA R G +E+ + ++ + A+G ++V TFSS++ RI+ II Sbjct: 339 LGNKGVLALLSESTNAERPGYTATERKVGESFKSLFAGAEGKRIIVATFSSNIHRIQQII 398 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + AE GRK+ + G S+ V++ AI++ IK + + E YP E++++I TGSQG Sbjct: 399 NNAESWGRKVAVSGRSMLNVLTTAIELNYIKVPQGMLVDIEDVNKYPPEKMVIITTGSQG 458 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++S G+ R V + D +I S+ IPGNE +G + N L++QG V+ E Sbjct: 459 EPLSALSRMSSGDHRQVSITPSDLIIISATPIPGNEKFVGKLVNELMKQGAEVVYEAM-Y 517 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH ++LK M +P+ + IHGE H+ H+ LA++ GI + + G++ Sbjct: 518 EVHVSGHACQDELKMMLALTKPKFFIPIHGEYKHMKKHEGLAIKMGIPEKNIFLLNIGQV 577 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + ++++ +V G L DG +G + + R+ LS G + V ++ + Sbjct: 578 VETDSVEMKVVGQVPAGKVLVDGLGVGDVGSVVLRDRKHLSEDGLIVVVTTINRETGMVA 637 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + ++ + V T+ ++ ++ ++ L + + + Sbjct: 638 AGPDIVSRGF-VYVRESEELMDDAKQLVKKTLQTCADRNIREWGNIKSNVRDELGNFIFQ 696 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 697 RTKRSPMILPIIMEV 711 >gi|134299670|ref|YP_001113166.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052370|gb|ABO50341.1| RNase J1 [Desulfotomaculum reducens MI-1] Length = 559 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 185/560 (33%), Positives = 305/560 (54%), Gaps = 10/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+GEIG NM YG I+IDCG++FP++++ G+D+V PD T++ Sbjct: 3 KQPALAVIPLGGLGEIGKNMTAVRYG----EHIILIDCGLAFPEEEMMGIDIVLPDYTYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ ++A+ +TH HEDH G L ++VPVY S A+GL++ K R+ ++ Sbjct: 59 LDNKEKILAVLLTHGHEDHIGGLPYFLKQINVPVYGSRLALGLVDRKLKEHRIERQSDLR 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D +++G F++E +RV+HSIP+ MAL I SPVG +VHTGD+K+D + GDV D Sbjct: 119 PIIPRDMIEIGPFTVEFIRVSHSIPDAMALAIHSPVGTLVHTGDFKVDHTPVDGDVIDLH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++G G+L LM DSTN R G +SE+ + K+ + AK V++ +F+S++ R++ Sbjct: 179 KFASLGERGVLVLMSDSTNVERPGYTLSERLVGKSFDEYFLEAKERVIIASFASNIHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A + GR++ + G S+ V+SVA ++G + + + + P+ +++++ TG Sbjct: 239 QAILTAHKYGRRVAVAGRSMVNVLSVANELGYLHIPKDILIELDEVNKLPKNEVVILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ GE R V++ DTVI S+ IPGNE + I N+L + G V+ E Sbjct: 299 SQGEPMSALTRMAFGEHRQVEVLPGDTVIISATPIPGNEKLVSRIINQLFKLGCSVVYEG 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + +HVSGHP +LK M +RP+ + +HGE L H ELA GI + Sbjct: 359 S-SDIHVSGHPSQEELKLMLNLLRPKYFIPVHGEYRMLKKHAELAQDLGIPGENIFVGEI 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G++ + V G L DG +G ++ + RR ++ G L V V +D H Sbjct: 418 GQVFEFTRRYGRLAGRVHAGRVLVDGLGVGDVGNIVLRDRRDMAQEGILIVVVTMDKHTH 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P++V G Y + + + K V + +++ I AL Sbjct: 478 QVLAGPDVVSRGF-VYVRESEALMEEARKKVNVALEKCINQGHCGWSYIKQEIKGALGKF 536 Query: 538 LKKVWGKKPLVTVFINKISR 557 L + ++P++ I ++ + Sbjct: 537 LYEKTRRRPMILPIIMEVDK 556 >gi|323701886|ref|ZP_08113556.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum nigrificans DSM 574] gi|323533190|gb|EGB23059.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum nigrificans DSM 574] Length = 554 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 180/558 (32%), Positives = 309/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GEIG NM +G ++IDCG+ FP++++ G+D+V PDIT++ Sbjct: 3 KEPKLAVIPLGGLGEIGKNMTAVRFG----ENIVLIDCGLMFPEEEMLGIDIVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + I +TH HEDH GAL + ++VPVY S A+GL++ K + ++ Sbjct: 59 LENKELVRGILLTHGHEDHIGALPYVLKQINVPVYGSKLALGLVQGKLKEHNILDEVKLY 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D V +G F +E +RV+HSIP+ MAL I +PVG ++HTGD+K+D + G+V D Sbjct: 119 TVKPRDTVHIGPFKVEFIRVSHSIPDAMALAIHTPVGTVLHTGDFKIDQTPVDGEVIDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L +M DSTN R G +SE+ + + +NA+ +++ TF+++V R++ Sbjct: 179 KFAQLGEKGVLVMMSDSTNVERPGYTMSERVVGNTFDETFRNAEERIIIATFATNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I +A + GR + ++G S+ V++VA ++G ++ + + + P+ +++++ TG Sbjct: 239 QAILVAHKYGRHVAVVGRSMVNVMTVAAELGYLQIPEGTLIELDEAARLPKNKVVLLTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R V++ DTVI S+ IPGNE + I ++L + G +VI E Sbjct: 299 SQGEPMSALTRIAMSDHRQVEIMPGDTVIISATPIPGNEKLVARIIDQLFKLGAKVIYEG 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGHP +LK M IRP+ + +HGE L H +LA + GI + N Sbjct: 359 V-SGIHVSGHPSQEELKMMINLIRPKFFIPVHGEYRMLKKHADLAKELGIPSENIFVAEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G++L + V G L DG +G ++ + R+QLS G L V V +D N Sbjct: 418 GQVLEFTRRYGRVAGRVTSGKVLVDGLGVGDVGNIVLRDRKQLSQDGILIVVVTMDKETN 477 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + V T + + ++ + L Sbjct: 478 QVIAGPDIVSRGF-VYVRESEILMEEAKMKVKTALEKCNHRGVFEWAAIKSQVRDDLGKF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYERTRRRPMILPIIMEV 554 >gi|28210760|ref|NP_781704.1| Zn-dependent hydrolase [Clostridium tetani E88] gi|28203198|gb|AAO35641.1| putative Zn-dependent hydrolase (beta-lactamase superfamily) [Clostridium tetani E88] Length = 555 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 180/561 (32%), Positives = 306/561 (54%), Gaps = 12/561 (2%) Query: 1 MKN--EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK +++ +PLGG+ EIG N+ + Y ++IDCG+ FP +++ G+D+V PDI Sbjct: 1 MKKERDKVKVIPLGGLNEIGKNITAFEY----KNDIVVIDCGLKFPDEEMLGIDIVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K ++ + IF+TH HEDH GAL + L+VPVY + +G+LE K + + Sbjct: 57 SYLLKNKERVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTLGILETKLKEHNLLSSV 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + D + + ++E +R +HSI +++A+ I +PVG I+HTGD+K+D I G V Sbjct: 117 KLNCIKPRDMIKLENCTVEFIRTSHSIADSVAIAIHTPVGAILHTGDFKIDYTPIDGHVA 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+ ++ DSTN R G +SE + K +I KG ++V TF+S++ Sbjct: 177 DLSRFAELGRKGVALMLADSTNVERPGYTMSESTVGKTFDNIFTKGKGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ II A + RK+ G S++ +V VA ++G IK + F+ +S YP ++++I Sbjct: 237 RVQQIISTAVKFDRKVAFSGRSMENIVEVAKELGYIKAPLETFIDIDSINKYPDNKVVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL++++ E R V + DTV+ S+ IPGNE + + N+L ++G VI Sbjct: 297 TTGSQGEPMSALSRMAASEHRKVNIVPGDTVVISATPIPGNEKLVSRVINQLFQKGADVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 E +HVSGH +LK M+ +RP+ + +HGE HL H ELA + + Sbjct: 357 YEAL-ADIHVSGHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELAEKLGMRHENIVI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V+ G DG +G ++ + RR LS G L+V V ++ Sbjct: 416 AGNGDVIEVARDCIKKNGTVMSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVVTIER 475 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + V + + + ++ +I AL Sbjct: 476 GTGMVIAGPDIISRGF-VYVRESEYLMGEAREVVKEVLRKCEENHIVEWSTIKSNIKDAL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + ++P++ I +I Sbjct: 535 RAFLYEKTKRRPMILPIIMEI 555 >gi|160940884|ref|ZP_02088224.1| hypothetical protein CLOBOL_05776 [Clostridium bolteae ATCC BAA-613] gi|158436128|gb|EDP13895.1| hypothetical protein CLOBOL_05776 [Clostridium bolteae ATCC BAA-613] Length = 735 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 185/553 (33%), Positives = 294/553 (53%), Gaps = 14/553 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +PLGG+ +IGMN+ + Y I++DCG++FP DD+ G+DLV PD+T++ + Sbjct: 192 IIPLGGLEQIGMNITAFEY----EDSIIVVDCGLAFPGDDMLGIDLVIPDVTYLKQNIDK 247 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + ITH HEDH GAL + ++VPVY + I L+E K R+ K + G Sbjct: 248 VKGFVITHGHEDHIGALPYILQQVNVPVYGTKLTIALIEHKLEEHRLLKNTKRKVMKHGQ 307 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 V++G F +E V+ NHSI + AL I +PVG ++HTGD+K+D + GD D +G Sbjct: 308 SVNLGCFRVEFVKTNHSIQDASALAIFTPVGTVLHTGDFKIDYTPVFGDPIDLQRFAELG 367 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDI 246 +G+LALM DSTNA+R G +SE+ + K I + ++V TF+S+V R++ +++ Sbjct: 368 KKGVLALMADSTNAIRPGFTMSERTVGKTFDAIFAEHQNRRIIVATFASNVDRVQQVVNT 427 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A + GRK+V+ G S+ ++ +A +G I + + E YP E ++I TGSQGE Sbjct: 428 AYKYGRKVVVEGRSMVTIMDIASKLGYINVPEGTLIDIEHLRNYPPESTVLITTGSQGES 487 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ + V + D V+ SS IPGNE A+ ++ N L +G VI + Sbjct: 488 MAALSRMAASIHKKVSIVPGDVVVLSSTPIPGNEKAVANVVNELSMKGAEVICQ----DT 543 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 HVSGH DLK +Y + P+ + IHGE H +A +ELA G+ V +G ++ Sbjct: 544 HVSGHACQEDLKLIYSLVHPKFSIPIHGEYRHRMAQRELAQFMGVQKENAVMVNSGDVVA 603 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGV 482 L D E+ID V G DG +G ++ + R+ L+ G + V + L+ H N + Sbjct: 604 LDEDSCEVIDHVTCGGIFVDGLGVGDVGNIVLRDRQNLAQNGIIVVVLTLEKHSNQLLAG 663 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P+IV G Y + + + V V D D ++ I +L L K Sbjct: 664 PDIVSRGF-VYVRESEDLLEEAHTIVYDAVQDCLDRHVSDWGKIKNIIKDSLSDFLWKRM 722 Query: 543 GKKPLVTVFINKI 555 + P++ I ++ Sbjct: 723 KRNPMILPIIMEV 735 >gi|167772107|ref|ZP_02444160.1| hypothetical protein ANACOL_03481 [Anaerotruncus colihominis DSM 17241] gi|167665905|gb|EDS10035.1| hypothetical protein ANACOL_03481 [Anaerotruncus colihominis DSM 17241] Length = 832 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 178/555 (32%), Positives = 284/555 (51%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ E+G N+ +Y ++DCG++FP +++ GVDLV PD T++ K R Sbjct: 284 VRIIPLGGLLEVGKNITVYE----CMNDMFIVDCGMTFPDENMLGVDLVLPDFTYVQKNR 339 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I ITH HEDH GAL ++VPVYA+ +GL+E K + K+ + Sbjct: 340 DKLRGIVITHGHEDHIGALPYFLKQINVPVYATRLTLGLIENKLREHGLYGKVKLVQIAP 399 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + +G +E +RVNHSIP+ +AL I +P G I+ TGD+K+D I+GD+ D Sbjct: 400 RETIKLGCMEVEFIRVNHSIPDAVALAIHTPAGVIIQTGDFKIDYTPIIGDIIDLARFGE 459 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +G +G+LAL+ DSTNA R G +E + + + K A +++ TFSS++ R++ I Sbjct: 460 LGGQGVLALLSDSTNAERPGFTPTEVTVADSFDKLFKQAGHKRIIIATFSSNIHRMQLIC 519 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 + A + GRK+ + G S+ V+V+ ++G +K + + + Y E +++I TGSQG Sbjct: 520 EAAAKHGRKVAVSGRSMINAVAVSTELGYLKPPNGVMIDIDDINRYRPEDIVLITTGSQG 579 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ + R V + D +I S+ IPGNE +G + N L+ G VI E Sbjct: 580 EPMSALSRMASNDHRKVTVTPDDFIIISATPIPGNEKTVGRVVNELMRLGADVIYERM-Y 638 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +LK M +P+ +HGE L H L L GI + NG + Sbjct: 639 EVHVSGHACQEELKIMLALTKPKFFFPVHGEYKQLKRHASLGLAMGIPTENIFIGENGHV 698 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 L ++ + V G L DG +G + + R+ L G + V +D I Sbjct: 699 FELDGVSVKTGEIVPSGRVLVDGLGVGDVGSIVLRDRKHLGEDGLIVVVTTIDGTSGEIV 758 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y + + TV D R +D ++ + AL S Sbjct: 759 AGPDIISRGF-VYVREAEDMLSEARAIAKQTVQDCVGGRMRDWGNIKTQVRDALSSYFYG 817 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 818 RTKRSPMILPVIQEV 832 >gi|258646779|ref|ZP_05734248.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] gi|260404205|gb|EEW97752.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] Length = 553 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 182/559 (32%), Positives = 295/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGG+GE+G NM ++ YG + I+ID G++FP + +PGVD+V PD ++ Sbjct: 1 MAKSRLQIIPLGGLGEVGKNMTVFRYG----DEIIVIDAGMAFPDETMPGVDIVIPDFSY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R + AI ITH HEDH G+L L + PVYA+ GL+E K +++ K Sbjct: 57 LIENRDKIKAILITHGHEDHIGSLAYLLRDVSAPVYATRLTCGLIEGKLKEQKIGKYNLN 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + GD+ G+F V HSIP++ + +R+PVG +VHTGD+K D + G+ TD Sbjct: 117 VV-KTGDEFRRGSFRFGFFHVCHSIPDSCGVYVRTPVGTVVHTGDFKFDHSPVDGEQTDM 175 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G G+L L DSTNA G +SE + K++ D +G +++ TF+S+VSR+ Sbjct: 176 HKLAELGRNGVLVLCADSTNAQNPGYTLSEAVVSKSLRDAFHEVRGRIILATFASNVSRV 235 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ID A + RK+ + G S+ VV +A+++G +K + F+ E Y +++ ++ T Sbjct: 236 QMAIDAAVENKRKVCVFGRSMVNVVGIALEMGYLKAPEGTFIEPEELNHYRDDRICILTT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP + L++++ G R V++ DTVI S+ IPGNE ++G + L+ G +VI Sbjct: 296 GSQGEPMAGLSRMADGSHRQVQIHAGDTVIISASPIPGNETSVGRTIDNLMRLGAKVITS 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH DLK M +RP+ V +HGE L +H ELA G+ + Sbjct: 356 RT-SRVHVSGHGSQEDLKTMLSLVRPKFFVPVHGEYRMLRSHAELAESLGVPKQNILIGD 414 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG + +I +V G DG +G ++ I R+QL+ G V + L+ Sbjct: 415 NGTVFEFTNRSGKINGKVQSGAVFVDGLGVGDVGNIVIRDRQQLAQDGVFIVVIALEKGS 474 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y D ++ + + + ++ I AL Sbjct: 475 NQVAAGPDIVSRGF-VYVRDSEELMSGARSRIENVLERCNTGNVTEWNAIKTQIRDALGR 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 534 YFFEKTKRRPMILPIIQEV 552 >gi|282849635|ref|ZP_06259019.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] gi|282580572|gb|EFB85971.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] Length = 722 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 172 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L + PVYA+ GL+E K +VS K Sbjct: 228 IENKDRVKAVVITHGHEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCL-R 286 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G ++ ++ NHSIP++ A+ +P+G I+HTGD+K+D + G + D Sbjct: 287 TIAAGDEVQIGQVTVGFIQTNHSIPDSCAVYFNTPIGTILHTGDFKIDQTPVDGRLMDMH 346 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LAL+ DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 347 KFAELGNKGVLALLSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 406 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 407 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 466 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 467 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGK 526 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 527 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 585 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 586 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 645 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 646 TIVAGPDLVSRGF-VYVRDAEELMLAAERRVEQVLDDCEMQRIKDWTTIKQNVRDALGKF 704 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 705 FYDKTRRRPMILPIIQDV 722 >gi|134299786|ref|YP_001113282.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052486|gb|ABO50457.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 554 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 305/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GEIG NM +G ++IDCG+ FP++++ G+D+V PDIT++ Sbjct: 3 KEPKLAVIPLGGLGEIGKNMTAVRFG----ENIVLIDCGLMFPEEEMLGIDIVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ ++ I +TH HEDH GAL + ++VPVY S A+GL++ K + ++ Sbjct: 59 LEHKEQVLGILLTHGHEDHIGALPYVLRQINVPVYGSKLALGLVQGKLKEHNLLDQVKLH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D + +G F IE +RV+HSIP+ MA+ I +PVG ++HTGD+K+D + G+V D Sbjct: 119 TVKPRDTIHIGPFRIEFIRVSHSIPDAMAIAIHTPVGTLLHTGDFKIDQTPVDGEVIDLP 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+G +G+L +M DSTN R G +SE+ + + ++A+ +++ TF+S+V R++ Sbjct: 179 RFAALGEKGVLVMMSDSTNVERPGYTMSERVVGNTFDETFRHAQERIIIATFASNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I +A + R + ++G S+ V+ VA ++G I + + + P+ ++++I TG Sbjct: 239 QAISVAHKYDRHVAVVGRSMVNVMQVASELGYIHIPEGTLIELDEAARLPKNKVVLITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R V + DTVI S+ IPGNE + I ++L + G +VI E Sbjct: 299 SQGEPMSALTRIAMNDHRQVDIMPGDTVIISATPIPGNEKLVARIIDQLFKLGAKVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGHP +LK M +RP+ + +HGE L H ELA + GI + N Sbjct: 359 V-SGIHVSGHPSQEELKLMLNLVRPKFFIPVHGEYRMLKKHAELARELGIPGENIFVGEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ + V G L DG +G ++ + R+QLS G L V V +D + Sbjct: 418 GQVFEFSRRYGRMAGRVTSGKILVDGLGVGDVGNIVLRDRKQLSQDGILIVVVTMDKQNN 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + V + + ++ + L Sbjct: 478 KVLAGPDIVSRGF-VYVRESEILMEEAKNKVKLALDKCCTRGISEWAAIKSQVRDDLGKF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYERTRRRPMILPIIMEV 554 >gi|303243032|ref|ZP_07329484.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] gi|302589425|gb|EFL59221.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] Length = 555 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 186/552 (33%), Positives = 301/552 (54%), Gaps = 10/552 (1%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +PLGG+GEIG N+ L+ Y ++DCGV+FP+DD+ G+DLV PD+T++ K + Sbjct: 10 IIPLGGMGEIGKNITLFEY----DEDIFVVDCGVAFPEDDMLGIDLVIPDVTYLSKNIEK 65 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + I +TH HEDH GAL + L VPVY + +GL+E K + + + D Sbjct: 66 VRGIVVTHGHEDHIGALPYILKDLKVPVYGTKLTLGLIEQKLEEHGILNDVELRVVKPSD 125 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 V +G F +E +R HSI +++AL I++PVG ++HTGD+K+D I G+ D L +G Sbjct: 126 VVSLGCFKVEFIRSTHSIADSVALAIQTPVGTVIHTGDFKIDYTPIQGEAMDLARLAELG 185 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 N+G+L LM DSTN R G +SE+ + + +I NAK +LV TF+S+V RI+ I++ A Sbjct: 186 NKGVLLLMSDSTNVERPGYTMSERTVGEAFEEIFMNAKRRILVATFASNVHRIQQIVNAA 245 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + RKI + G S+ V VA+++G + + + + + YP E+L++I TGSQGEP Sbjct: 246 VKFDRKIAICGRSMINVAKVAMNLGYLDMPEGILIDIDQISKYPEEKLVIITTGSQGEPM 305 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 SALA+++ G+ + V + D VI S+ IPGNE I + N L +G VI E +H Sbjct: 306 SALARMAAGDHKKVDIVPGDLVIISASPIPGNEKTISKVINELFRKGAEVIYESL-AEIH 364 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRL 424 VSGH +LK +Y I+P+ + +HGE HL H L + + + G+++ L Sbjct: 365 VSGHACQEELKLIYSLIKPKFFMPVHGEFRHLKRHANLIHELGMPTENIFIMDIGRVMEL 424 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVP 483 D I V G L DG +G ++ + R+ LS G + + + ++ N+ P Sbjct: 425 TEDSARINGSVTSGRVLVDGLGVGDVGNIVLRDRKHLSQDGLIVIVITIEGDTGNVVAGP 484 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +++ G Y + + + + + + R+ D + I ALR L + Sbjct: 485 DVISRGF-VYVRESEDLIEQIREVSRLALQRCEDKRKNDWSTKKSIIRDALRDYLYEKTK 543 Query: 544 KKPLVTVFINKI 555 ++P++ I ++ Sbjct: 544 RRPMILPIIMEV 555 >gi|269798741|ref|YP_003312641.1| beta-lactamase [Veillonella parvula DSM 2008] gi|269095370|gb|ACZ25361.1| beta-lactamase domain protein [Veillonella parvula DSM 2008] Length = 720 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 170 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 225 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L + PVYA+ GL+E K +VS K Sbjct: 226 IENKDRVKAVVITHGHEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCL-R 284 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G ++ ++ NHSIP++ A+ +P+G I+HTGD+K+D + G + D Sbjct: 285 TIAAGDEVQIGQVTVGFIQTNHSIPDSCAVYFNTPIGTILHTGDFKIDQTPVDGRLMDMH 344 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LAL+ DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 345 KFAELGNKGVLALLSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 404 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 405 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNIIIDVDVMHNYTDDQIMILTTG 464 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 465 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGK 524 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 525 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 583 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 584 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 643 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 644 TIVAGPDLVSRGF-VYVRDAEELMLAAERRVEQVLEDCEMQRIKDWTTIKQNVRDALGKF 702 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 703 FYDKTRRRPMILPIIQDV 720 >gi|251799822|ref|YP_003014553.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247547448|gb|ACT04467.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 559 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 290/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++L LGGVGEIG NM Y I+IDCG FP ++L G+D++ PDIT+++ Sbjct: 7 EKKLTIFALGGVGEIGKNMYAVQYA----NDIIVIDCGSKFPDEELLGIDIIVPDITYLI 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + A+ ITH HEDH G L + L +PVYAS +GL+E K + Sbjct: 63 ENKDKVRALLITHGHEDHIGGLPYILKQLSMPVYASRLTMGLIEGKLKEAGLLGSTERHL 122 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ +G+ + NHSIP+++ +V+ +P G +VHTGD+K D + D Sbjct: 123 IHSDSELKLGSMKASFFKTNHSIPDSLGVVLDTPEGVVVHTGDFKFDQTPVGDYHADIHR 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+LAL+ +STNA R G SE+ + N D + A+ V+V+TF+S+V R++ Sbjct: 183 MAEIGKKGVLALLSESTNAERPGFTPSERIVGANFIDAFRKAERRVIVSTFASNVHRLQQ 242 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D A GRK+ ++G S+ ++++A ++G + D + + Y Q++++ TGS Sbjct: 243 VVDAAAASGRKLAIIGRSMVNMITIASELGYLDIPDGMLIETNEVNRYADNQVVILCTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED- 360 QGEP SAL +++R R V++ E DTVI S+ IPGNE +IG + L G VI Sbjct: 303 QGEPMSALTRMARSNHRQVEILEGDTVIISATPIPGNERSIGRTVDELFRLGANVIYGSG 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + +HVSGH +LK M Q + P+ + IHGE + HK+LA G+ V N Sbjct: 363 TQTGMHVSGHGSQEELKLMLQLMAPKYFIPIHGEYRMQLHHKKLAEAVGVEQGNTFIVDN 422 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G+++ + +V G DG IG ++ + R+ LS G L V V + Sbjct: 423 GEIVEIVNGDARKSGKVPAGNTYIDGLGIGDVGNIVLRDRKHLSQDGILVVVVTISKQDK 482 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + + + + V T+ L+ ++ AL Sbjct: 483 TIKSGPDIISRGF-VYVRESEGLLEEAGRIVTRTITKSISDNVNQWTTLKSNVKDALGRF 541 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 542 LYEQTKRKPMILPIIMEV 559 >gi|258516306|ref|YP_003192528.1| beta-lactamase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780011|gb|ACV63905.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 554 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 301/558 (53%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ +L +PLGG+GEIG NM + YG ++ID G+ FP++++ G+D+V PDIT++ Sbjct: 3 RDPKLSLIPLGGLGEIGKNMMVVRYG----ENLLIIDSGLMFPEEEMLGIDIVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH GAL + L+VPVY + +GLL+ K + + + Sbjct: 59 LENKDMVRGIVLTHGHEDHIGALPYVLRQLNVPVYGTKLTLGLLQGKLREQNLINDVVLN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + +G F +E +RV+HSIP+ +A+ I +P+G +VHTGD+K+D + G++TD Sbjct: 119 MVKVRETISIGPFKVEFIRVSHSIPDAVAIAIHTPIGTVVHTGDFKIDQTPVDGEITDFY 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L L+ DSTN R G SE+ + + + G ++V +F+S+V R++ Sbjct: 179 RFAQLGEKGVLVLLSDSTNVERPGYTESERRVGFAFDETFRTVTGRIIVASFASNVHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A + GRK+ ++G S+ VV+VA ++G + + + + EQ+ ++ TG Sbjct: 239 QVISNAYKYGRKVAVVGRSMVNVVNVASELGYLHIPEGTLIELDEAKTLAPEQVAILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R V++ DT++ S+ IPGNE + I ++L ++G VI E Sbjct: 299 SQGEPMSALTRMASSDHRQVEILPGDTIVISATPIPGNEKLVSRIIDQLFKKGAHVIYET 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGHP +LK M IRP+ V +HGE L+ H ELA GI + N Sbjct: 359 F-SGIHASGHPSQEELKLMINLIRPKFFVPVHGEYRMLIKHAELARDMGIPSDRIFVAEN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G++L + V G L DG +G ++ + R+QLS G L V V ++ Sbjct: 418 GQVLDFTRKSGRVAGRVTAGKVLVDGLGVGDVGNIVLRDRKQLSQDGILIVVVTINRENG 477 Query: 479 I-FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + V + + + ++ + AL Sbjct: 478 LVVAGPDIVSRGF-VYVRESEALMDDAKYRVKCALDKCFERNITEWAAIKSHVRDALVKF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYERTRRRPMILPIIMEV 554 >gi|78221587|ref|YP_383334.1| hypothetical protein Gmet_0366 [Geobacter metallireducens GS-15] gi|78192842|gb|ABB30609.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 558 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 188/554 (33%), Positives = 296/554 (53%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGGVGEIG+NM +Y YG I+ DCG+ FP+ + G+D+V PDIT++ + Sbjct: 11 LRVIPLGGVGEIGLNMMVYEYG----DDIIVADCGLMFPEPHMLGIDIVIPDITYLRERA 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + IF+TH HEDH GAL + L VP++ + +G + K + + Sbjct: 67 DRVRGIFLTHGHEDHIGALPYVLPELPVPIFGTALTLGFVREKLKEFDLDSSTDLSVVKP 126 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + V VG F +E +RV+HSI + AL IR+P G ++HTGD+K+D + G++TD S Sbjct: 127 RESVTVGPFKVEFIRVSHSIVDGCALAIRTPEGVVIHTGDFKIDQTPVDGELTDLASFAR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G+EG+LAL DSTN R+G +SE+ + + +I G ++V FSS++ R++ ++ Sbjct: 187 YGSEGVLALFSDSTNVERQGYTLSERLVGEAFDEIFPRCPGRIIVAAFSSNIHRVQQAVE 246 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRK++L G S+ V++A +G ++ D + + P EQ+ +I TGSQGE Sbjct: 247 SAARCGRKVLLNGRSMIANVAIARQLGYLRIPDDVLIDLREMPRLPPEQVCMITTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL +++ + + +KL + DTVI SSR IPGNE I + N L +G V E Sbjct: 307 PMSALTRIAMDDHKQIKLEKGDTVILSSRFIPGNEKTISDLINHLYRRGAEVFHEKV-SE 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 VHVSGH +LK M +RP+ V +HGE HLV H LA + G+ V NG ++ Sbjct: 366 VHVSGHASREELKLMINLVRPKFFVPVHGEYRHLVKHSRLAQRVGVPEERCLVVENGAVI 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 R E+ V +G DG IG + + R+ LS G + V + ++ I Sbjct: 426 RFADGAAEVAGSVANGRVFIDGKGIGDVGAVVLKDRKHLSEDGMVVVIISINPQTGEILY 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G ++ + + K V+ + + KD +++ + LR K Sbjct: 486 GPDIVSRGF-VFEDESQEYLDETKKIVLDLLAGMSPEVLKDWNEVKQEVRRILRRFFNKT 544 Query: 542 WGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 545 IERRPVILPLIIEM 558 >gi|326202083|ref|ZP_08191953.1| RNA-metabolising metallo-beta-lactamase [Clostridium papyrosolvens DSM 2782] gi|325987878|gb|EGD48704.1| RNA-metabolising metallo-beta-lactamase [Clostridium papyrosolvens DSM 2782] Length = 555 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 315/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L +PLGG+ EIG N+ + YG +++DCG+SFP+D++ G+DLV PD+T++ Sbjct: 4 SKKKLKVIPLGGLQEIGKNITAFEYG----DDILVVDCGLSFPEDEMLGIDLVIPDVTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + I +TH HEDH GAL + L+VP+Y + +GL++ K + + Sbjct: 60 IKNKEKVRGIVLTHGHEDHIGALPYVLRELNVPIYGTKLTLGLIKCKLEEHGLLDSVQME 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G V++GAF +E +R HSI + +AL I +P+G ++HTGD+K+D I G D Sbjct: 120 TVHQGQTVELGAFKVEFIRSTHSIADAVALAIFTPIGTVIHTGDFKIDYTPIEGQPMDLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG +G+L LMCDSTN EG +SE+ + + +I N K +LV TF+S+V R++ Sbjct: 180 RLAEIGKKGVLLLMCDSTNVENEGYTLSERTVGETFDEIFMNCKSRILVATFASNVHRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + A + GRK+ +LG S+ VV+VA+++G + + + + +S PR++L++I TG Sbjct: 240 QIFNAAVKFGRKVTVLGRSMINVVNVAMELGYLNVPEGVLIDLDSMDKVPRDKLVIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E + V++ D VI S+ IPGNE I + N L ++G +VI E Sbjct: 300 SQGEPMSALTRITFNEHKKVEIVPDDLVIISASPIPGNEKLISKVINELFKKGAKVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVRN 418 VHVSGH ++K ++ ++P+ + +HGE HL H ELAL+ + + Sbjct: 360 L-ADVHVSGHACQEEIKLIHNLVKPKFFMPVHGEHRHLRQHAELALKMGLPREKIFIMEI 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 GK+L L D +I V G L DG +G ++ + R+ LS G + V + ++ Sbjct: 419 GKVLELTNDSAKINGSVTSGKVLVDGLGVGDVGNVVLRDRKHLSQDGLIVVVITIEGDTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 N+ P+I+ G Y + + + L + + + D + + +I AL+ Sbjct: 479 NVVAGPDIISRGF-VYVRESEDLMEQLKEIAKQAIFKSSSKHQGDWSIRKSAIREALKDC 537 Query: 538 LKKVWGKKPLVTVFINKI 555 + + +KP++ I +I Sbjct: 538 IYERTKRKPMILPIIMEI 555 >gi|258511440|ref|YP_003184874.1| beta-lactamase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478166|gb|ACV58485.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 551 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 181/557 (32%), Positives = 294/557 (52%), Gaps = 14/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 L +PLGGVGEIG NM LY YG + I++D G+ FP +D+ G+D+V PDITF+ Sbjct: 4 SKSRLSIIPLGGVGEIGKNMTLYWYG----QDMIVVDAGLKFPDEDMLGIDIVIPDITFL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R+ + IF+TH HEDH G L + ++VPVY + +GL+E K V + I Sbjct: 60 VENREKIRGIFLTHGHEDHIGGLPYVLREINVPVYGTRLTLGLVENKLREAGV-HDVKLI 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +V +G F++ VNHSIP+T+ I +P G ++HTGD+K D I G D Sbjct: 119 TMDGKSRVQLGQFAVSPFYVNHSIPDTVGFAIETPEGIVIHTGDYKFDQTPIDGRHADIH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G G+LAL+ DSTNA R G SE + I +I+ A G V+++TF+S++ R++ Sbjct: 179 KLAQWGARGVLALVGDSTNAERPGYTPSEMTVGIKIDEIISQAPGRVILSTFASNIHRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I AE+ GRK+ ++G S+ V ++ +G ++ + + + P E++++++TG Sbjct: 239 LMIRAAERHGRKVAIVGRSMVNNVQTSLQLGYLEAQPDTLVDPDEVNKLPPEKVVILSTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++R R +++ DTV+ +S IPGNE + ++L G VI Sbjct: 299 SQGEPMSALTRMARAAHRKIEIVPGDTVVLASSPIPGNEKFVARTIDQLFRAGAHVIYR- 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VH SGH +LK M Q +RP+ + +HGE H +LA+Q GI + Sbjct: 358 ---GVHASGHGSQEELKWMLQLVRPKYFLPVHGEFRMQRIHADLAMQLGIQPDHIFITEI 414 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + +V G + DG +G ++ + R+ LS G L V V L Sbjct: 415 GDVVEFEDGRARLGGKVPAGSVMIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKTTG 474 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y + + + V +T+ L + L+ ++ L Sbjct: 475 HILSGPDIISRGF-VYVRESEALLDEANRLVESTLSKLVSDNVSEWSSLKTAVRDTLGRY 533 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 534 LYEQTRRRPMILPIIME 550 >gi|260881010|ref|ZP_05403378.2| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] gi|260850170|gb|EEX70177.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] Length = 564 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 192/556 (34%), Positives = 304/556 (54%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+GEIG NM + + ++ID G+ FP +D+ G+DLV PDI ++++ Sbjct: 16 QKLQIIPLGGLGEIGKNMTVIR----VDDEILVIDAGLMFPDEDMLGIDLVIPDINYLIE 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AI +TH HEDH GAL + ++VPVY + +G+LE + V Sbjct: 72 NKDKIKAIVLTHGHEDHIGALPYVLKKINVPVYGTRLTLGILEGRLKENGVDSSNLHSVM 131 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 Q GD ++VG FS+ +RVNHSIP+ + L I++PVG IVHTGD+KLD I G +TD Sbjct: 132 Q-GDIINVGCFSVGFIRVNHSIPDAVGLSIKTPVGMIVHTGDFKLDYTPIDGKMTDFRRF 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GN G+L LM DSTN+ REG SE+ + NA+G ++V TFSS+V RI+ + Sbjct: 191 SDLGNRGVLVLMADSTNSEREGHTPSERTVGAAFDRAFHNARGRIIVATFSSNVHRIQQV 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + R + +LG S+ VV++++++G I + + + Y EQ+++I TGSQ Sbjct: 251 IDTAVRYKRHVAVLGRSMVNVVNISLELGYITAPEGTIVDIDEIHNYRMEQMVIITTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL ++S + R V + DTVI S+ IPGNE + + L++ G VI Sbjct: 311 GEPMSALTRMSMSDHRKVGIVPGDTVIISATPIPGNEKLVSKTIDNLMKLGANVIYGR-N 369 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH +LK M+ +RP+ + +HGE HLV H LA + + NG+ Sbjct: 370 QGIHVSGHASREELKLMHNLVRPKFFIPVHGEYHHLVQHARLARELGMPKENIFISENGQ 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NI 479 +L D ++ +V G+ + DG +G ++ + RRQLS G L V V ++ + Sbjct: 430 ILEFTRDKGQVAGKVTAGMVMVDGLGVGDVGNIVLRDRRQLSQDGILIVVVTMNKQTHRV 489 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + V + + K+ ++ ++ AL L Sbjct: 490 VSGPDIVSRGF-VYVRESEALMDEATARVQQALDRCEDEKVKEWAAIKSNVRDALGRYLF 548 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 549 EKTRRRPMILPIIMEV 564 >gi|182418991|ref|ZP_02950247.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237667119|ref|ZP_04527103.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377274|gb|EDT74842.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237655467|gb|EEP53023.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 555 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 182/560 (32%), Positives = 313/560 (55%), Gaps = 12/560 (2%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKNE ++ +PLGG+ EIG N+ Y +++DCG+ FP DD+ G+D+V PDI Sbjct: 1 MKNERAKIKIIPLGGINEIGKNITAIEY----KEDIVIVDCGLKFPDDDMFGIDIVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLLKNSEKIKGIFLTHGHEDHIGALPYVLKQLNVPVYGTKLTLGIVETKLKEHGLLSST 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + D + + + S+E ++ NHSI +++A+ I +P+G ++HTGD+K+D I G++ Sbjct: 117 ELIRVKPKDIIKLSSVSVEFIKTNHSIADSVAIAIHTPLGVVLHTGDFKIDYTPIDGEMM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG +G+L +M DSTN R G ++EK + + + A G ++V TF+S+V Sbjct: 177 DFARLAEIGRKGVLVMMADSTNVERPGYTMTEKVVGETFNRLFGKANGRIIVATFASNVH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ II A++ +K+ + G S++ +V VAI++G ++ + + + G YP +++++I Sbjct: 237 RIQQIITAAQKYEKKVAVSGRSMENIVQVAIELGYLEVDKDVLVPIDQIGKYPNDKMVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E R + + DTVI S+ IPGNE + + N+L ++G VI Sbjct: 297 TTGSQGEPMSALARMAASEHRKIAIIPGDTVIISATPIPGNEKFVSKVVNQLFKKGAEVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + E +HVSGH +LK M ++P+ + +HGE HL H ELA++ G+ + Sbjct: 357 YDSVE-KIHVSGHACQEELKLMQALVKPKFFIPVHGEYRHLKKHGELAMELGLPEKNLVI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ L + I+ V G DG +G ++ + R+ LS G L+V V ++ Sbjct: 416 CENGDVIELTRNYIKKNGSVTSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + V + + + + + D L+ + L Sbjct: 476 QTGKVVSGPDIISRGF-VYVRESEGLMDEAREIVRSVLKNCEERQITDWATLKSKMRDEL 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 R L + +KP++ I + Sbjct: 535 REFLYEKTKRKPMILPIIME 554 >gi|323140799|ref|ZP_08075715.1| ribonuclease J 1 [Phascolarctobacterium sp. YIT 12067] gi|322414715|gb|EFY05518.1| ribonuclease J 1 [Phascolarctobacterium sp. YIT 12067] Length = 580 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 186/557 (33%), Positives = 307/557 (55%), Gaps = 11/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ +PLGG+GEIG NM ++ YG I+ID G+ FP+DD+ G+DLV PDIT+++ Sbjct: 31 QHKVQIIPLGGLGEIGKNMTVFRYG----DDMILIDAGLMFPEDDMLGIDLVIPDITYLV 86 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + IF+TH HEDH GAL + + PVY + +G+L+ + V + + Sbjct: 87 ENKDKIKGIFLTHGHEDHIGALPYVMKQIDCPVYGTALTLGILQGRLKENGVGNETLHVV 146 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + GDK++ GAF ++ +RVNHSIP+ +A+ I +P+G I+HTGD+K+D + G V + + Sbjct: 147 -KPGDKINTGAFKLDFIRVNHSIPDAVAIAITTPIGVIIHTGDFKIDHTPVDGQVMEFNK 205 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G+ G+L L+ DSTNA R G SEK + + + + AK ++V TFSS+V RI+ Sbjct: 206 FAEYGDRGVLCLLADSTNAERPGFTPSEKMVGQTFDEEFRYAKHRIIVATFSSNVHRIQQ 265 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +ID A + RK+ ++G S+ VV++A ++G +K + + + + Y E++++I TGS Sbjct: 266 VIDTAVKYDRKVAVIGRSMVNVVNIAKELGYLKVPEGVLIDIDETHNYTPEKVVIITTGS 325 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ + + V + DTVI S+ IPGNE + + L + G VI E + Sbjct: 326 QGEPMSALTRMAMNDHKKVDIMPGDTVIISATPIPGNEKLVSRTIDHLYKLGADVIYEKS 385 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 VHVSGH ++K M+ +RP+ + +HGE HLV H LA + NG Sbjct: 386 NG-VHVSGHASQEEIKMMHNLVRPRFFMPVHGEYRHLVKHANLAKSLGMPADHIVIGENG 444 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 ++ L I I +V G L DG +G ++ + RRQLS G + V V +D + Sbjct: 445 SVIELTKSSITINGKVPAGKVLVDGLGVGDVGNIVLRDRRQLSQDGIMIVVVTVDKESCH 504 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+IV G Y + + V + + + ++ ++ +L L Sbjct: 505 VVSGPDIVSRGF-VYVREAEDLMDEARDKVQAALDRCEENNVSEWSAIKSTVRDSLGRFL 563 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ I +I Sbjct: 564 FERTRRRPMILPIIMEI 580 >gi|332799235|ref|YP_004460734.1| Ribocuclease J [Tepidanaerobacter sp. Re1] gi|332696970|gb|AEE91427.1| Ribocuclease J [Tepidanaerobacter sp. Re1] Length = 557 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 192/559 (34%), Positives = 321/559 (57%), Gaps = 11/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++L+ +PLGG+GEIG NM + YG ++ ++ID G+ FP++++ G+D+V PDIT++ Sbjct: 5 EQDKLLIIPLGGMGEIGKNMTVIQYG----KEILLIDSGLMFPEEEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 ++ ++ + I ITH HEDH GAL + ++ P+Y + +GL+E K R++KK I Sbjct: 61 IENKEYIKGILITHGHEDHIGALPYVLQQINAPLYGTKLTLGLVEGKLKETRLNKKNISM 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +++G+F+++ +RVNHSIP+ + I +PVG I HTGD+KLD + G+ D Sbjct: 121 NVVKPPTTINIGSFAVDFIRVNHSIPDAVGFAIHTPVGIICHTGDFKLDQTPVNGEKADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G++G+LAL+ DSTNA REG +SEK + I DI K G ++V TF+S++ RI Sbjct: 181 HKFAELGSKGVLALLSDSTNAEREGYTMSEKVVGHTIEDIFKTVTGRIIVATFASNIHRI 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIAT 299 + I D A + RK+ ++G S+ VV++A+D+G + + L D P+E++++I T Sbjct: 241 QQIFDAAYKNDRKVAVVGRSMVNVVNIALDLGYLTIPKSLLMDLDELNRLPKEKVVIITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ E + V++ +DTV+ S+ IPGNE I + L ++G VI E Sbjct: 301 GSQGEPMSALTRMAMSEHKKVEIMPEDTVLISASPIPGNEKFIARTIDHLFKKGANVIYE 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +LK M +RP+ + +HGE HLV H LA++ GI + V Sbjct: 361 AI-SGVHVSGHASQEELKLMLNLVRPKFFIPVHGEYRHLVHHSHLAMEVGIPSENIFIVE 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG++L D ++ V G L DG +G ++ + R+QLS G L V V +D Sbjct: 420 NGRILEFTKDSCKMAGRVTAGKVLVDGLGVGDVGNIVLRDRKQLSQDGILIVVVAIDKET 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + ++ + + V + + + ++ + L Sbjct: 480 GEVVSGPDIISRGF-VYVRESEELMEQAREKVKQALRKCQEENISEWSTIKSQVREHLGK 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + ++P++ I ++ Sbjct: 539 LLFEQTRRRPMILPIIMEV 557 >gi|187934162|ref|YP_001885377.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187722315|gb|ACD23536.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 555 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 190/561 (33%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKNE ++ +PLGG+ EIG N+ Y ++IDCG+ FP DD+ G+D+V PD+ Sbjct: 1 MKNERAKVRIIPLGGINEIGKNITAIEY----KEDIVVIDCGLKFPDDDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLIKNKDRVRGIFLTHGHEDHIGALPYVLKQLNVPVYGTKLTLGIVETKLKEHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++ + D + + S+E ++ NHSI +++A+ + +P+G ++HTGD+K+D I G++ Sbjct: 117 ELVTIKPRDTIKLNNVSVEFIKTNHSIADSVAIAVHTPLGAVLHTGDFKIDYTPIDGEIM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA++ DSTN R G +SEK + ++ + NAKG ++V TF+S++ Sbjct: 177 DFARFAELGKKGVLAMLADSTNVERPGYTMSEKTVGESFIRLFDNAKGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ II A+ G+KI + G S++ +V VAI++G + + +F+S + YP E++++I Sbjct: 237 RIQQIITAAQIYGKKIAVSGRSMENIVQVAIELGYLTIEKDVFVSVDQISKYPNEKIVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + + + E DTVI S+ IPGNE + + N+L ++G VI Sbjct: 297 TTGSQGEPMSALARMAASEHKKINIIEGDTVIISATPIPGNEKLVSKVINQLFKKGAEVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E E VHVSGH +LK M + ++P+ + +HGE HL H ELA+ G+ + Sbjct: 357 YESLE-KVHVSGHACQEELKLMQRLVKPRFFIPVHGEYRHLKQHGELAISLGLSEKNLLI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + I+ V G DG +G ++ + R+ LS G L+V V ++ Sbjct: 416 PENGDVIEITRKSIKKSCTVSAGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTMER 475 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 H N+ P+I+ G Y + + + V + D + D L+ + L Sbjct: 476 HTANVIAGPDIISRGF-VYVRESEGLMDEAKELVRKVLKDCEEKNITDWATLKSRMRDEL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R LL + +KP++ I +I Sbjct: 535 RELLYEKTKRKPMILPIIMEI 555 >gi|302874710|ref|YP_003843343.1| RNA-metabolising metallo-beta-lactamase [Clostridium cellulovorans 743B] gi|307690677|ref|ZP_07633123.1| RNA-metabolising metallo-beta-lactamase [Clostridium cellulovorans 743B] gi|302577567|gb|ADL51579.1| RNA-metabolising metallo-beta-lactamase [Clostridium cellulovorans 743B] Length = 559 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 303/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++ +PLGG+ EIG NM L Y + I++DCG+ FP+D++ G+DLV PDIT++ Sbjct: 8 EKSKIKIIPLGGISEIGKNMTLIEY----KDELIIVDCGLKFPEDEMFGIDLVIPDITYL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + IF+TH HEDH GAL + +++PVY + +G++E K + + I Sbjct: 64 LKNKDRIKGIFLTHGHEDHIGALPYILKQINIPVYGTKLTLGIVETKLKEHNLLSTVELI 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V + S+E + V+HSI + ++ I +P+G I+HTGD+K+D D Sbjct: 124 KVASKDIVKLDKISVEFIGVSHSIADACSIAIHTPLGVILHTGDFKIDFTPTRKVFPDLA 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L ++ DSTN R G SE + + +I AKG ++V TF+S+V RI+ Sbjct: 184 RFAELGRKGVLCMLADSTNVERPGYTKSESVVGETFMNIFSKAKGRIIVATFASNVHRIQ 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ AE+ G+K+ + G SL+ V VA+++G + ++ +S ++ Y ++++++ TG Sbjct: 244 QIINSAERYGKKVAVSGRSLENVTGVALELGYLTAEEDTLVSVDAINRYNDDKVVIVTTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ E R + + DTVI S+ IPGNE + + N+L +G VI Sbjct: 304 SQGEPMSALSRMAYNEHRKLNIKSGDTVILSASPIPGNERLVSRVINQLFRKGADVIYSG 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 VHVSGH +LK M+ ++P+ V HGE HL H ELA++ G+ Sbjct: 364 I-AEVHVSGHACQEELKLMHTLVKPKHFVPAHGEYRHLKKHCELAVELGLDPNRTLIPEL 422 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + D I+ VV G DG +G ++ + R+ LS G L+V V ++ Sbjct: 423 GDIIEVSRDGIKRNGTVVCGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKSSG 482 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + V + + + ++ +I ALR Sbjct: 483 SVIAGPDIISRGF-VYVRESEDLMDRARAIVKEVLQKCEEDNITEWSTIKGNIKEALRVY 541 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 542 LYEKTKRKPMILPIIMEI 559 >gi|302392325|ref|YP_003828145.1| RNA-metabolising metallo-beta-lactamase [Acetohalobium arabaticum DSM 5501] gi|302204402|gb|ADL13080.1| RNA-metabolising metallo-beta-lactamase [Acetohalobium arabaticum DSM 5501] Length = 556 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 187/562 (33%), Positives = 297/562 (52%), Gaps = 13/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M N ++L +PLGGV EIG NM + + ++ID G+ FP+DDL G+DLV PD Sbjct: 1 MSNNQIDKLSCIPLGGVSEIGKNMMVVEI----EDEILIIDAGIMFPEDDLLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +T++ K R + I +TH H DH GAL L ++VPVY + +GL+ + K Sbjct: 57 MTYLKKNRDRIKGIVLTHGHLDHIGALPYLLKEINVPVYGTKLTLGLVRGNLEEHGLLKD 116 Query: 118 IPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 G +G F++E +RVNHSI + AL + +PVG +V+ D+K D + Sbjct: 117 SYLKHVYPGHTAQIGEHFNVEFIRVNHSIADACALAVHTPVGTLVYASDFKFDQTPVNDQ 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + D L +G EG+LAL DSTNA REG +SEK + + I +I +A G ++V +F+S+ Sbjct: 177 MADIHRLAELGQEGVLALFSDSTNAEREGYTMSEKVVGETIDEIFSDADGRIIVASFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + RI+ ID A RK+ + G S+ V +A ++G + D + + + +Q+ Sbjct: 237 IDRIQQFIDSAFNQNRKVAVTGRSMINNVEIASELGYLDIPDGMLVDLDELKDLRDDQIA 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP +AL ++SRG+ R + + DTV+ S+ AIPGNE ++G N+L ++G Sbjct: 297 LITTGSQGEPMAALTRMSRGDHRQINIKSGDTVVVSATAIPGNEKSVGKTINKLFKRGAD 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI E VHVSGH +LK M ++P+ + +HGE H+ H +LA + GI + Sbjct: 357 VIYESV-SGVHVSGHASQEELKLMLNLVQPEYFIPVHGEYRHMHCHAKLAREVGIPEENI 415 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 G ++ + + V G L DG +G ++ + RR LS G L V V + Sbjct: 416 FINEPGNVMEFSNNDGQTTGSVTAGRVLVDGLGVGDVGNIVLRDRRLLSQDGVLIVVVTI 475 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 D+ I P+I+ G Y + G++ + V + Q + +L+ I A Sbjct: 476 DDRGQIVAGPDIISRGF-VYIRESGELISAATRRVEKALSKCEQNNVTEWSILKSEIKDA 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L S + ++P++ I ++ Sbjct: 535 LGSFIYHKIERRPMILPIIMEV 556 >gi|227825051|ref|ZP_03989883.1| beta-lactamase [Acidaminococcus sp. D21] gi|226905550|gb|EEH91468.1| beta-lactamase [Acidaminococcus sp. D21] Length = 558 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 198/558 (35%), Positives = 320/558 (57%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +++ +PLGG+GEIG NM + YG + I++D G++FP D++ G+DLV P+ +++ Sbjct: 8 QQKKISIIPLGGLGEIGKNMTAFRYG----EEIILVDAGLAFPDDEMLGIDLVIPNFSYL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + AIF+TH HEDH GA+ + L+ PVY P +G+L + VS + C Sbjct: 64 VENKDKVKAIFLTHGHEDHIGAMPYVMKELNCPVYGCPLTLGILSGRLRENGVSDQ-KCK 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +AG V G+F +E + VNHSIP+ ++L I +PVG IVHTGD+K D + G TD Sbjct: 123 AVKAGATVRAGSFRVEFIHVNHSIPDAVSLAIHTPVGTIVHTGDYKFDQTPVDGQPTDFA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+L L+ DSTN R G SEK + K + + + AK ++V TFSS+V R++ Sbjct: 183 RLAEIGDKGVLLLLADSTNIERPGFTPSEKNVGKTLDEQFRAAKNRIIVATFSSNVHRLQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +ID A RK+ ++G S+ VV++A ++G +K + + + Y Q+ +I TG Sbjct: 243 QVIDAAVMTRRKVAVIGRSMVNVVNIASEMGYLKIPKGVLIDIDETRNYSPRQIAIITTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL ++S E + V + DTVI S+ IPGNE +GH + L + G V+ Sbjct: 303 SQGEPMSALTRMSNSEHKKVSIMPGDTVIISATPIPGNERGVGHTIDNLYKLGAEVVYGR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E +HVSGH ++K M++ IRP+ + +HGE HLV HK+LA+Q V N Sbjct: 363 -ERGIHVSGHASQEEIKMMHRLIRPKFFMPVHGEYRHLVLHKKLAMQLGMNKDNVVIAEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + P+ I I V G L DG +G ++ + RRQLS G L V V +D ++Y Sbjct: 422 GSVVDVTPNSIGISGHVTAGKTLIDGLGVGDVGNVVLRDRRQLSQDGILIVVVTIDHSNY 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+IV G Y + ++ + V++T+ + + L+ ++ +L Sbjct: 482 SIAAGPDIVSRGF-VYVRESEELMEGARDRVLSTLDKCRESHVTEWSSLKSAVRDSLGRY 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 541 LFEKTRRRPMILPLIMEV 558 >gi|313894148|ref|ZP_07827713.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440972|gb|EFR59399.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 715 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 300/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 165 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 220 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L ++ PVYA+ GL+E K +VS K Sbjct: 221 IENKDRVKAVVITHGHEDHIGSLAYLMKEINCPVYATNLVCGLIEGKFKEHKVSPKCL-R 279 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G+ ++ ++ NHSIP++ A+ +P+G ++HTGD+K+D + G + D Sbjct: 280 TIAAGDEVQIGSVNVGFIQTNHSIPDSCAVYFDTPIGTVLHTGDFKIDQTPVDGRLMDMH 339 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LALM DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 340 KFAELGNKGVLALMSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 399 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 +D A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 400 QAVDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 459 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 460 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGK 519 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 520 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 578 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 579 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 638 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 639 TIVAGPDLVSRGF-VYVRDAEELMLAAERRVEQVLDDCEAQRIKDWTTIKQNVRDALGKF 697 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 698 FYDKTRRRPMILPIIQDV 715 >gi|188590524|ref|YP_001920524.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|251779176|ref|ZP_04822096.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500805|gb|ACD53941.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|243083491|gb|EES49381.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 555 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 189/561 (33%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKNE ++ +PLGG+ EIG N+ Y ++IDCG+ FP DD+ G+D+V PD+ Sbjct: 1 MKNERAKVRIIPLGGINEIGKNITAIEY----KEDIVVIDCGLKFPDDDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VP+Y + +G++E K + Sbjct: 57 SYLIKNKDRVRGIFLTHGHEDHIGALPYVLKQLNVPIYGTKLTLGIVETKLREHGLLSTT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++ + D + + S+E ++ NHSI +++A+ + +P+G ++HTGD+K+D I G++ Sbjct: 117 ELVTIKPRDTIKLNNVSVEFIKTNHSIADSVAIAVHTPLGAVLHTGDFKIDYTPIDGEIM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G+LA++ DSTN R G +SEK + ++ + NAKG ++V TF+S++ Sbjct: 177 DFARFAELGKKGVLAMLADSTNVERPGYTMSEKTVGESFIRLFDNAKGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ II A+ G+KI + G S++ +V VAI++G + + +F+S + YP E++++I Sbjct: 237 RIQQIITAAQIYGKKIAVSGRSMENIVQVAIELGYLTIEKDVFVSVDQISKYPNEKIVII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E + + + E DTVI S+ IPGNE + + N+L ++G VI Sbjct: 297 TTGSQGEPMSALARMAASEHKKINIIEGDTVIISATPIPGNEKLVSKVINQLFKKGAEVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E E VHVSGH +LK M + ++P+ + +HGE HL H ELA+ G+ + Sbjct: 357 YESLE-KVHVSGHACQEELKLMQRLVKPRFFIPVHGEYRHLKQHGELAISLGLSEKNLLI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + I+ V G DG +G ++ + R+ LS G L+V V ++ Sbjct: 416 PENGDVIEITRKSIKKSCTVSAGQIFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTMER 475 Query: 476 HY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 H N+ P+I+ G Y + + + V + D + D L+ + L Sbjct: 476 HTANVIAGPDIISRGF-VYVRESEGLMDEAKELVRKVLKDCEEKNITDWATLKSRMRDEL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R LL + +KP++ I +I Sbjct: 535 RELLYEKTKRKPMILPIIMEI 555 >gi|313905324|ref|ZP_07838690.1| RNA-metabolising metallo-beta-lactamase [Eubacterium cellulosolvens 6] gi|313469794|gb|EFR65130.1| RNA-metabolising metallo-beta-lactamase [Eubacterium cellulosolvens 6] Length = 555 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 193/558 (34%), Positives = 311/558 (55%), Gaps = 14/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L +PLGG+ EIGMN+ + Y +++DCG++FP DD+ G+DLV PDIT++ Sbjct: 6 SDSKLKIIPLGGLEEIGMNITAFEY----EDSIVVVDCGLAFPDDDMLGIDLVIPDITYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + K + ITH HEDH GAL + ++VPVYA+ +GL+E K + + Sbjct: 62 KQNIKKVKGFVITHGHEDHIGALPYVLREINVPVYATKLTVGLIEHKLEERDMLRSTKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 122 TVKFGQSINLGKFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRI 240 IG +G+LALMCDSTNA R G +SEK + + I + +++ TF+S+V R+ Sbjct: 182 RFAEIGKKGVLALMCDSTNAERPGFTMSEKTVGRAFDTIFSEHRSQRLIIATFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + IID A + GRK+V+ G S+ ++S+A ++G +K D + YP EQ+++I T Sbjct: 242 QQIIDSAAKYGRKVVVEGRSMVNIISIAQELGYLKVPDNTLIDINMMKNYPDEQMVLITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + D ++FSS IPGNE A+ ++ N L E+G VI + Sbjct: 302 GSQGESMAALSRMAADIHKKVTIKPGDLIVFSSHPIPGNEKAVSNVINELYEKGAEVIFQ 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH D+K +Y ++P+ + +HGE HL+A K +A GI + ++ Sbjct: 362 ----DVHVSGHACQEDIKLIYSLVKPKYSIPVHGEYRHLIAQKNIAESLGIDKDNIFVIK 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L L D ++ +V G + DG +G ++ + R++LS G L V + L+ H Sbjct: 418 TGDVLELNQDGAKVTGKVETGEVMVDGLGVGDVGNIVLRDRQRLSEDGILIVVMTLEKHG 477 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N + P+IV G Y + + + V + + + D L+ SI +L S Sbjct: 478 NQLLAGPDIVSRGF-VYVRESEDLMEEARLVVEDALDECLRRNISDWGKLKSSIKDSLGS 536 Query: 537 LLKKVWGKKPLVTVFINK 554 + K + P++ I + Sbjct: 537 FVWKRTQRNPMILPIIME 554 >gi|218290113|ref|ZP_03494275.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239822|gb|EED07011.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 551 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 180/554 (32%), Positives = 294/554 (53%), Gaps = 14/554 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGGVGEIG NM LY YG + I++D G+ FP +D+ G+D+V PDITF+++ Sbjct: 7 RLSIIPLGGVGEIGKNMTLYWYG----QDMIVVDAGLKFPDEDMLGIDIVIPDITFLVEN 62 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R+ + IF+TH HEDH G L + ++VPVY + +GL+E K V + ++ Sbjct: 63 REKIRGIFLTHGHEDHIGGLPYVLREINVPVYGTRLTLGLVENKLREAGV-HDVKLVTMD 121 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +V +G F++ VNHSIP+T+ I +P G ++HTGD+K D I G D L Sbjct: 122 GKSRVQLGQFAVSPFYVNHSIPDTVGFAIETPEGIVIHTGDYKFDQTPIDGRHADIHKLA 181 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G G+LAL+ DSTNA R G SE + I +I+ A G V+++TF+S++ R++ +I Sbjct: 182 QWGARGVLALVGDSTNAERPGYTPSEMTVGIKIDEIISQAPGRVILSTFASNIHRLQLMI 241 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 AE+ GRK+ ++G S+ V ++ +G ++ + + + P E++++++TGSQG Sbjct: 242 RAAERHGRKVAIVGRSMVNNVQTSLQLGYLEAQPDTLIDPDEVNKLPPEKVVILSTGSQG 301 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++R R +++ DTV+ +S IPGNE + ++L G VI Sbjct: 302 EPMSALTRMARAAHRKIEIVPGDTVVLASSPIPGNEKFVARTIDQLFRAGAHVIYR---- 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VH SGH +LK M Q +RP+ + +HGE H +LA+Q GI + G + Sbjct: 358 GVHASGHGSQEELKWMLQLVRPKYFLPVHGEFRMQRIHADLAMQLGIQPDHIFITEIGDV 417 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + +V G + DG +G ++ + R+ LS G L V V L +I Sbjct: 418 VEFEDGRARLGGKVPAGSVMIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKTTGHIL 477 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y + + + V +T+ L + L+ ++ L L + Sbjct: 478 SGPDIISRGF-VYVRESEALLDEANRLVESTLSKLVSDNVSEWSSLKTAVRDTLGRYLYE 536 Query: 541 VWGKKPLVTVFINK 554 ++P++ I + Sbjct: 537 QTRRRPMILPIIME 550 >gi|220929194|ref|YP_002506103.1| beta-lactamase [Clostridium cellulolyticum H10] gi|219999522|gb|ACL76123.1| beta-lactamase domain protein [Clostridium cellulolyticum H10] Length = 555 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 315/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L +PLGG+ EIG N+ + YG +++DCG+SFP+D++ G+DLV PDIT++ Sbjct: 4 SKKKLKVIPLGGLQEIGKNITAFEYG----DDILVVDCGLSFPEDEMLGIDLVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + I +TH HEDH GAL + ++VP+Y + +GL++ K + + Sbjct: 60 IKNKEKVRGIVLTHGHEDHIGALPYVLREINVPIYGTKLTLGLIKCKLEEHGLLDTVQME 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G V +GAF +E +R HSI + +AL I +PVG ++HTGD+K+D I G D Sbjct: 120 TVHQGQTVQLGAFKVEFIRSTHSIADAVALAIFTPVGTVIHTGDFKIDYTPIEGQPMDLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG +G+L LMCDSTN EG +SE+ + + I N K +LV+TF+S+V R++ Sbjct: 180 RLAEIGKKGVLLLMCDSTNVENEGYTLSERTVGETFDQIFMNCKSRILVSTFASNVHRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + A + RK+ +LG S+ VV+VA+++G + + + + ++ PR++L++I+TG Sbjct: 240 QIFNAAVKFERKVTVLGRSMINVVNVAMELGYLNVPEGVLIDLDNMDKVPRDKLVIISTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E + V++ D VI S+ IPGNE I + N L ++G +VI E Sbjct: 300 SQGEPMSALTRITFNEHKKVEIVPDDLVIISASPIPGNEKLISKVINELFKKGAKVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH ++K ++ ++P+ + +HGE HL H ELA + G+ + + Sbjct: 360 L-ADVHVSGHACQEEIKLIHNIVKPKFFMPVHGEHRHLRQHAELAFKMGMPKENIFIMEI 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 GK+L L + +I V G L DG +G ++ + RR LS G + V + ++ Sbjct: 419 GKVLELTNNSAKINGAVTAGKVLVDGLGVGDVGNVVLRDRRHLSQDGLIVVVITIEGDTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 N+ P+I+ G Y + + + L + + + D + + +I ALR Sbjct: 479 NVVAGPDIISRGF-VYVRESEDLMEQLKEIAKQAIFKSSSKNQGDWSIRKSAIREALRDC 537 Query: 538 LKKVWGKKPLVTVFINKI 555 + + +KP++ I +I Sbjct: 538 IYERTKRKPMILPIIMEI 555 >gi|238924255|ref|YP_002937771.1| putative hydrolase of the metallo-beta-lactamase superfamily [Eubacterium rectale ATCC 33656] gi|238875930|gb|ACR75637.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Eubacterium rectale ATCC 33656] Length = 557 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 187/559 (33%), Positives = 309/559 (55%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L +PLGG+ +IGMN+ + Y I++DCG+SFP+DD+ G+DLV PDIT++ Sbjct: 8 NTGKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLSFPEDDMLGIDLVIPDITYL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + FITH HEDH GA+ + ++VP+YA+ IG+++ K + K + Sbjct: 64 KENIDKVKGFFITHGHEDHIGAIPYVLKEINVPIYATKLTIGIIDRKLEEHGMLKTVKRK 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F +E ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 124 VVKYGQHINLGCFRVEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLA 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 IG +G+LALMCDSTNA R G SEK + K + I ++ K +++ TF+S+V R+ Sbjct: 184 RFGEIGKKGVLALMCDSTNAERPGFTQSEKSVGKVLDGIFEDHRKNRIIIATFASNVDRV 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ GRK+ + G S+ ++S+A ++G + D + + E YP EQ ++I T Sbjct: 244 QQIINCAEKYGRKVAIEGRSMVNIISIASELGYLSLPDNILIDVEQLRSYPDEQTVIITT 303 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R V + DT++FSS IPGNE ++ I N L+ +G VI + Sbjct: 304 GSQGESMAALSRMANGTHRKVSIKPNDTIVFSSNPIPGNEKSVTGIINELMMKGADVIFQ 363 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH D+K +Y + P+ + +HGE HLVA ++A Q G + + Sbjct: 364 ----DVHVSGHACQEDIKLIYSLVNPKYAIPVHGEYKHLVAQAKIAEQLGYDTDHIKILS 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G +L + D ++ V G + DG +G ++ + R++L+ G + V + L+ Sbjct: 420 SGDVLEINEDGAKVTGRVHVGNVMVDGLGVGDVGNIVLRDRQRLAEDGIIIVVMTLEAGS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + T+ L D ++ + AL Sbjct: 480 GQLLAGPDIVSRGF-VYVRNSESLMDEAKCVLDDTMERLTDNNVTDWGKIKTEVKDALGD 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K ++P++ I ++ Sbjct: 539 FVWKETKRRPMIIPIIMEV 557 >gi|253682656|ref|ZP_04863453.1| ribonuclease J 1 (RNase J1) [Clostridium botulinum D str. 1873] gi|253562368|gb|EES91820.1| ribonuclease J 1 (RNase J1) [Clostridium botulinum D str. 1873] Length = 555 Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 306/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +++ +PLGG+ E+G N+ + Y + ++IDCG+ FP D++ G+D+V PDI ++ Sbjct: 4 EKDKIKIIPLGGLEEVGKNLTAFEY----KNEIVVIDCGLKFPDDEMLGIDVVIPDIGYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + IF+TH HEDH GAL + L+VPVY + IG++E + + Sbjct: 60 LKNKEKVKGIFLTHGHEDHIGALPYVLKDLNVPVYGTKLTIGIVENRLKESGILSSSNLK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q D + + SIE +R +HSI ++ A+ I +P+G I+HTGD+K+D I G V D Sbjct: 120 RVQPRDIIKLNNISIEFIRTSHSIADSAAIAIHTPLGVILHTGDFKIDYTPIDGQVADLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G++A++ DSTN R+G +SE+ + K +I A+G ++V TF+S++ RI+ Sbjct: 180 RFVELGKKGVIAMLADSTNVERQGYTMSERTVGKTFENIFSKAEGRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 II +E+IGRK+ + G S++ +V+VA ++G + +D +S + YP ++ +I TG Sbjct: 240 QIITASEKIGRKVAVSGRSMENIVAVASELGYLKFEDGTLISVDDIKKYPNNRISIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ + + V + D VI S+ IPGNE + + N+L +QG VI E Sbjct: 300 SQGEPMSALSRMASSDHKKVSIVPGDMVIISATPIPGNEKLVSKVINQLFKQGANVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH +LK ++ ++P+ + +HGE L H ELA++ N Sbjct: 360 L-ADVHVSGHACQEELKLIHTLVKPKFFIPVHGEYRMLKQHAELAVKLGMPEKNAIISEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + D I V+ G DG +G ++ + RR LS G L+V V + Sbjct: 419 GDVIEVTRDTIRKSGSVMSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVVTIGKDTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + + + V + + + + +++ + LR Sbjct: 479 KVIAGPDIISRGF-VYVRESEDLMEGARLIVRDALKECEEKHITEWAVIKSKVKEVLRMF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 538 LYEKTKRKPMILPIIMEV 555 >gi|196033475|ref|ZP_03100887.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus W] gi|195993909|gb|EDX57865.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus W] Length = 557 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 289/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DT I ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTFIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|257438703|ref|ZP_05614458.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] gi|257198838|gb|EEU97122.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] Length = 600 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 290/555 (52%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM +Y + I++DCG+ FP ++ GVD+V PD TF+++ + Sbjct: 52 IHIYPLGGLGEVGKNMTVYE----CNGDMIIVDCGLVFPDSEMYGVDMVIPDFTFVVQNK 107 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G++ L +P+Y + GL+ K ++ K + Sbjct: 108 DKIKGLLITHGHEDHIGSIPYLLQKFDLPIYGTRLTCGLIRNKLEEFGLAGKTKFVEITP 167 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K+ +G F++E + VNHSIP+++A I SP G I+ TGD+K+D + VTD +L Sbjct: 168 KQKIKLGCFTVEPIHVNHSIPDSVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLTTLSE 227 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 G +G+LAL+ DSTNA R G +E+ + + ++ A+ +++ TF+S++ R++ II Sbjct: 228 YGQKGVLALLSDSTNAERPGFTATEQKVAAGVRNLFARARNKRIIIATFASNIYRVQQII 287 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ G S+ ++A ++G + + +S + YP EQ+++I TGSQG Sbjct: 288 DLAVEDGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPPEQVVLITTGSQG 347 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ R V++ D +I S+ IPGNE ++ I N L+ G VI E Sbjct: 348 EPLSALSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESM-Y 406 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH + K M RP+ + +HGE L H A GI + NG Sbjct: 407 DVHVSGHACQEEQKLMLTLTRPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSN 466 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L D I++ + V G + DG +G ++ + R+ LS G + + +D+ + Sbjct: 467 VILSRDEIKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVL 526 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + V + + +D ++ + AL S + + Sbjct: 527 AGPDLVSRGF-VYVRENESLMDGAQSIVENALDRCVEEHVRDWNSVKTRVREALSSYIYR 585 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 586 RTKRSPMILPILMEV 600 >gi|196039032|ref|ZP_03106339.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus NVH0597-99] gi|196030177|gb|EDX68777.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus NVH0597-99] Length = 557 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 179/562 (31%), Positives = 290/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ R NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFRTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|15614961|ref|NP_243264.1| hypothetical protein BH2398 [Bacillus halodurans C-125] gi|10175018|dbj|BAB06117.1| BH2398 [Bacillus halodurans C-125] Length = 555 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 184/557 (33%), Positives = 291/557 (52%), Gaps = 11/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E + LGGVGEIG NM + +ID G+ FP D++ GVD+V PDI++++ Sbjct: 6 TESIRVFALGGVGEIGKNMYVVE----VDDDLFVIDAGLMFPDDEMLGVDVVIPDISYLV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + AI +TH HEDH G L + L+VPVY + +GL+E K + + Sbjct: 62 ENEERVRAILLTHGHEDHIGGLPYVLQKLNVPVYGTKLTLGLVEEKLKEAGLIRSAKLKL 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ +G+ + R NHSIP+++ + I++ G IVHTGD+K D + G + Sbjct: 122 IDSNSRLKLGSTPVSFFRTNHSIPDSVGICIQTSQGFIVHTGDFKFDQTPVDGKQAEIGK 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + AIG++G+L L+ DSTNA R G SE + + I + + KG ++VTTF+S+V R++ Sbjct: 182 MAAIGHKGVLCLLSDSTNAERPGMTKSETEVGRGIAEAFEQTKGRIIVTTFASNVHRVQQ 241 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +I A RK+ + G S+ +VVS+A +G ++ D LF+ E Y E++ +I TGS Sbjct: 242 VIHAAIATNRKLAVAGRSMVKVVSIAERLGYLEAPDDLFIDIEEVSKYDDERVAIITTGS 301 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL+++++G R + + E DTVI ++ IPGNE ++ I + L G VI Sbjct: 302 QGEPMSALSRMAKGAHRQITITENDTVIIAATPIPGNERSVSTIVDLLHRIGADVIFG-- 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VH SGH +LK M +RP+ V IHGE AHKELA GI + V G Sbjct: 360 HGKVHASGHGSAEELKLMLNLMRPKFFVPIHGEFRMQHAHKELAKSVGIREEAIFLVDKG 419 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 +++ +V G L DG +G ++ + RR LS G L V V L+ Sbjct: 420 EVVEFRNGQGRKAGKVPSGNVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKQSGT 479 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P I+ G Y + K+ + + V T+ + L+ ++ L L Sbjct: 480 ILSGPNIISRGF-VYVRESEKLIEEANELVTETLKKCVTENVNEWSSLKSNVREVLSRFL 538 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 539 FEKTKRRPMILPIIMEV 555 >gi|188586086|ref|YP_001917631.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350773|gb|ACB85043.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 566 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 177/555 (31%), Positives = 301/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGGVGEIG NM + YG I+ID G+ FP +D+ GVD V PD++++ + + Sbjct: 18 LQVIPLGGVGEIGKNMFVIKYG----NDMIVIDAGLKFPDEDMLGVDFVIPDMSYLFEHK 73 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ IF+TH HEDH GAL L + PVY + +GL E K + + K I Sbjct: 74 DNIKGIFLTHGHEDHIGALPYLMKKIDAPVYGTKLTLGLAERKLGEQPIQKSISLKKILP 133 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G + +G F +E NHSIP+++ +V+ +P G IVHTGD+K D + G V D + L Sbjct: 134 GKTMQLGPFKMEFFSTNHSIPDSIGIVVHTPEGTIVHTGDFKFDHTPVSGKVADYNKLAE 193 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +GN+G+L L+ DSTNA R G S++ + + + +I + A +++ TF+S++ RI+ +I+ Sbjct: 194 LGNKGVLCLLSDSTNAERPGYTESDRTVGERLDEIFRQAPKRIILATFASNIYRIQQVIN 253 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF--GLYPREQLIVIATGSQG 303 A++ G+K+ ++G S+ V+ A ++G ++ + D+ P E+ +++ TGSQG Sbjct: 254 SAKKYGKKVGVVGRSMINVIEAASELGYLENVDDVVIDDIERVNQLPLEKTVLLTTGSQG 313 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ + R V++ DTV+ ++ IPGNE I + L ++G VI + Sbjct: 314 EPMSALTRIATDDHRKVEIMPHDTVVIAATPIPGNEKLISRSIDNLFKRGAHVIYQSV-S 372 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKM 421 VHVSGH +LK M ++P+ L+ HGE V HK +A + V NG++ Sbjct: 373 GVHVSGHGSQEELKMMLNLVKPKYLIPFHGEYRMQVHHKNVAEKLGMPSKNVFLAENGEV 432 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 + ++ +V G L DG +G ++ + RR LS G L V + +D + Sbjct: 433 IEFNRKRGKVNGKVPAGKVLVDGLGVGDVGNIVLRDRRLLSQDGILIVVIGVDKQNKTLI 492 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + ++ + + V+ V + + + + + ++ S+ L L + Sbjct: 493 AGPDIVSRGF-VYVRESEELLEEAREHVVKAVNKMSKSKMNEWQAIKSSVKDVLGQYLWE 551 Query: 541 VWGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 552 KTRRRPMILPIIMEV 566 >gi|150015993|ref|YP_001308247.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902458|gb|ABR33291.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 555 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 184/560 (32%), Positives = 312/560 (55%), Gaps = 12/560 (2%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKNE ++ +PLGG+ EIG N+ Y I+IDCG+ FP DD+ G+D+V PD+ Sbjct: 1 MKNERAKIKIIPLGGINEIGKNITAIEY----KEDIIIIDCGLKFPDDDMFGIDIVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++++K + + IF+TH HEDH GAL + L+VPVY + +G++E K + Sbjct: 57 SYLIKNSEKIKGIFLTHGHEDHIGALPYVLRQLNVPVYGTKLTLGIVETKLKEHGLLAST 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + D + + + S+E ++ NHSI +++A+ + +P+G ++HTGD+K+D I G++ Sbjct: 117 ELVRVKPKDIIKLDSVSVEFIKTNHSIADSVAIAVHTPLGVVLHTGDFKIDYTPIDGEMM 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L +G +G+L LM DSTN R G ++EK + + + AKG ++V TF+S+V Sbjct: 177 DFGRLAELGRKGVLVLMADSTNVERPGYTMTEKVVGETFLRLFGKAKGRLIVATFASNVH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ II AE +K+ + G S++ +V VAI++G + + + + YP E+++VI Sbjct: 237 RIQQIITAAEAYEKKVAVSGRSMENIVQVAIELGYLTVGKDVLVPVDQISKYPNEKIVVI 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SALA+++ E R + + DTVI S+ IPGNE + + N+L ++G +VI Sbjct: 297 TTGSQGEPMSALARMAASEHRKINVIPGDTVIISATPIPGNEKFVSKVINQLFKKGAQVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + E +HVSGH +LK M ++P+ V +HGE HL H ELA++ G+ + Sbjct: 357 YDSQE-KIHVSGHACQEELKLMQALVKPKFFVPVHGEYRHLKKHGELAMEVGLSEKNLLI 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + + I+ VV G DG +G ++ + R+ LS G L++ V ++ Sbjct: 416 PENGDVIEVARNYIKKNGTVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTIVVTIEK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + V + + + + D L+ + L Sbjct: 476 QTGRVVSGPDIISRGF-VYVRESEGLMDEAREIVKSVLKTCEEKQITDWATLKSKMRDQL 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 R L + +KP++ I + Sbjct: 535 REYLYEKTKRKPMILPIIME 554 >gi|228932994|ref|ZP_04095857.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826595|gb|EEM72366.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 564 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|229090669|ref|ZP_04221902.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|228692611|gb|EEL46337.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] Length = 564 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|217959189|ref|YP_002337737.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH187] gi|217062946|gb|ACJ77196.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH187] Length = 557 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 288/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDDMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I+ G Y D + K L K + T+ +L + +L+ + A Sbjct: 477 KVDGEIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKFIYTNTKRKPMILPIIIEV 557 >gi|228926744|ref|ZP_04089812.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832857|gb|EEM78426.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 564 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIQTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|331269725|ref|YP_004396217.1| beta-lactamase domain-containing protein [Clostridium botulinum BKT015925] gi|329126275|gb|AEB76220.1| beta-lactamase domain protein [Clostridium botulinum BKT015925] Length = 555 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 305/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +++ +PLGG+ E+G N+ + Y + ++IDCG+ FP D++ G+D+V PDI ++ Sbjct: 4 EKDKIKIIPLGGLEEVGKNLTAFEY----KNEIVVIDCGLKFPDDEMLGIDVVIPDIGYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + IF+TH HEDH GAL + L+VPVY + IG++E + + Sbjct: 60 LKNKEKVKGIFLTHGHEDHIGALPYVLKDLNVPVYGTKLTIGIVENRLKESGMLASSTLK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q D + + SIE +R +HSI ++ A+ I +P+G I+HTGD+K+D I G V D Sbjct: 120 RVQPRDIIKLNNMSIEFIRTSHSIADSAAIAIHTPLGVILHTGDFKIDYTPIDGQVADLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G++A++ DSTN R+G +SE+ + K +I A+G ++V TF+S++ RI+ Sbjct: 180 RFVELGKKGVIAMLADSTNVERQGYTMSERTVGKTFENIFSKAEGRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II +E+IGRK+ + G S++ +V VA ++G ++ +D +S + YP ++ +I TG Sbjct: 240 QIITASEKIGRKVAVSGRSMENIVGVASELGYLQFEDGTLISIDDIKKYPNNRISIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ + + V + D VI S+ IPGNE + + N+L +QG VI E Sbjct: 300 SQGEPMSALSRMASSDHKKVSIVPGDMVIISATPIPGNEKLVSKVINQLFKQGANVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH +LK ++ ++P+ + +HGE L H ELA++ N Sbjct: 360 L-ADVHVSGHACQEELKLVHTLVKPRFFIPVHGEYRMLKQHAELAVKLGMPEKNTIISEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + D I V+ G DG +G ++ + RR LS G L+V V + Sbjct: 419 GDVIEVTRDAIRKSGSVMSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVVTIGKDTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + + V + + + + +++ + LR Sbjct: 479 KVIAGPDIISRGF-VYVRESEDLMDGARLMVRDALRECEEKHITEWAVIKSKVKEVLRMF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 538 LYEKTKRKPMILPIIMEV 555 >gi|49184537|ref|YP_027789.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|165869549|ref|ZP_02214208.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0488] gi|167639105|ref|ZP_02397378.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0193] gi|170706417|ref|ZP_02896877.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0389] gi|177650627|ref|ZP_02933594.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0174] gi|190566330|ref|ZP_03019248.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis Tsiankovskii-I] gi|254723788|ref|ZP_05185574.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254734550|ref|ZP_05192262.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254755201|ref|ZP_05207235.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254759737|ref|ZP_05211761.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|49178464|gb|AAT53840.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164714989|gb|EDR20507.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0488] gi|167512895|gb|EDR88268.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0193] gi|170128515|gb|EDS97382.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0389] gi|172083771|gb|EDT68831.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0174] gi|190562465|gb|EDV16432.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis Tsiankovskii-I] Length = 557 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 290/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|309389262|gb|ADO77142.1| RNA-metabolising metallo-beta-lactamase [Halanaerobium praevalens DSM 2228] Length = 558 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 190/564 (33%), Positives = 306/564 (54%), Gaps = 15/564 (2%) Query: 1 MKNE----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 MK+ ++ LGGVGEIG NM + G + ++ID GV FP++DL G+DLV P Sbjct: 1 MKDNNKIKDVSMTTLGGVGEIGKNMWVLEIG----DEMLIIDSGVKFPENDLLGIDLVIP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 D +++K + + I +TH H DH GAL L ++ P+Y + +GLLE R+ K Sbjct: 57 DFDYVIKNKDKINGIVLTHGHLDHIGALPYLLKEINAPIYGTKLTLGLLEGNLKEHRLLK 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 +G K VG+F +E +RVNHSI +T AL I +P+G IV+ D+K D I G Sbjct: 117 DTRLKVVNSGKKYQVGSFEVEFIRVNHSIADTCALAIHTPLGPIVYASDFKFDQTPIDGQ 176 Query: 177 VTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 V D L +G+ EG+LAL DSTN REG +SEK + + + +I + A+ ++V TF+ Sbjct: 177 VADFHKLAELGDSEEGVLALFSDSTNVEREGYTLSEKVVGETVEEIFRGARERIIVATFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 S++ R++ I+D A + RKI G S+ V +A +G ++ D + + P + Sbjct: 237 SNIHRVQQIVDAAFKYNRKIAFTGRSMINNVDIARRLGYLQVPDDMIVDIRDCSDLPDSK 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 + ++ TGSQGEP +AL +++RG+ ++ + + DTV+ S+ AIPGNE +G N+L +G Sbjct: 297 VTLLTTGSQGEPYAALTRMARGDHYHINIKKGDTVMISASAIPGNEKFVGQTINKLYRRG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 VI ED VHVSGH +LK M ++P+ V +HGE HL H +LA + GI Sbjct: 357 ANVIYEDV-SGVHVSGHASQEELKLMLNLVKPKYFVPVHGEYRHLYKHADLAEKNGIPKD 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + G + D + +++ G L DG IG ++ + R+ LS G + V V Sbjct: 416 NIYIADVGDKINFSEDKVSKAEKIQSGDVLIDGLGIGDVGNIVLRDRKLLSEDGIIIVVV 475 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 +D H NI P+I+ G Y + ++ + K V + D + + +L+++I Sbjct: 476 TIDKHGNILVGPDIITRGF-VYIRESEELIESATKRVERALKDCEENNVTEWSVLKDTIR 534 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 +L + + + + P++ I ++ Sbjct: 535 KSLNNYIYQKIKRNPMILPVIMEV 558 >gi|218902824|ref|YP_002450658.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH820] gi|218534791|gb|ACK87189.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH820] Length = 557 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 61 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 181 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 241 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 301 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 361 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 421 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 481 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYTNTKRKPMILPIIIEV 557 >gi|313113469|ref|ZP_07799058.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624196|gb|EFQ07562.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 608 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 288/555 (51%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM +Y + I++DCG+ FP D+ GVD+V PD TF+++ + Sbjct: 60 IHIYPLGGLGEVGKNMTVYE----CNGDMIIVDCGLVFPDSDMYGVDMVIPDFTFVVQNK 115 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G++ L L +P+Y + GL+ K ++ + + Sbjct: 116 DKIKGLLITHGHEDHIGSIPYLLQKLDLPIYGTRLTCGLIRNKLEEFGLAGRTKFVEITP 175 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K+ +G F+IE + VNHSIP+ +A I SP G I+ TGD+K+D + VTD +L Sbjct: 176 RQKIKLGCFTIEPIHVNHSIPDAVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLSTLAE 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 G G+LAL+ DSTN+ R G +E+ + + ++ A+ +++ TF+S++ R++ II Sbjct: 236 YGQHGVLALLSDSTNSERPGFTATEQKVAAGVRNLFARARNKRIIIATFASNIYRVQQII 295 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ G S+ ++A ++G + + +S + YP EQ+++I TGSQG Sbjct: 296 DLAVEDGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPPEQVVLITTGSQG 355 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ R V++ D +I S+ IPGNE ++ I N L+ G VI E Sbjct: 356 EPLSALSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESM-Y 414 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH + K M +P+ + +HGE L H A GI + NG Sbjct: 415 DVHVSGHACQEEQKLMLTLTKPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSN 474 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L D I++ + V G + DG +G ++ + R+ LS G + + +D+ + Sbjct: 475 VILSQDEIKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVL 534 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + V + +D ++ + AL S + + Sbjct: 535 AGPDLVSRGF-VYVRENESLMDGAQSIVENALDRCVDEHVRDWNSVKTRVREALSSYIYR 593 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 594 RTKRSPMILPILMEV 608 >gi|52143749|ref|YP_083079.1| Zn-dependent hydrolase [Bacillus cereus E33L] gi|51977218|gb|AAU18768.1| Zn-dependent hydrolase [Bacillus cereus E33L] Length = 557 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 289/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQAAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVKKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ DL + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINDLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|150390231|ref|YP_001320280.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950093|gb|ABR48621.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 554 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 307/558 (55%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ +PLGG+ EIG NM Y + ++IDCG+SFP+D++ G+D+V PDITF+ Sbjct: 4 KPTKIRIIPLGGLSEIGRNMTAIEY----KDEILIIDCGLSFPEDEMLGIDIVIPDITFL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + I +TH HEDH GAL + ++VPVY S +GL+E K ++ ++ Sbjct: 60 IKNKEKIKGIVLTHGHEDHIGALPYVLKKINVPVYGSRLTLGLVENKLKEHKI-PEVHLQ 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 AGD +++G F +E ++ HSIP+ A+ + + +G I HTGD+K+D I G D Sbjct: 119 RVNAGDMINLGVFDVEFIQSCHSIPDAYAIAVHTSLGIIFHTGDFKIDYTPIDGQFIDLH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L ++ DSTN R G+ +SEK + +I AK ++V TF+S+V R++ Sbjct: 179 RIAELGKKGVLVMLADSTNVERAGSTMSEKSVGATFENIFSKAKKRIIVATFASNVHRVQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID A + RK+V G S+ +++VA +VG + + L + Y QL ++ TG Sbjct: 239 QIIDAAHKHSRKVVTSGRSMINIIAVAQEVGALNVPEGLIIDINEMDQYEDHQLAILTTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ E R + + D V+FS+ IPGNE ++ + N+L E+G VI E Sbjct: 299 SQGEPMAALSRMASSEHRKLDIKAGDLVVFSATPIPGNEKSVTKVINQLFEKGAEVIYES 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH +LK M++ PQ + +HGEP HL H +LA + V ++N Sbjct: 359 L-AEVHVSGHACQEELKLMHRLANPQYFIPVHGEPRHLRQHGKLAEKLGMKSENVFVIQN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ D ++ V G L DG +G ++ + R+ L+ G + V V + Sbjct: 418 GSVVEFTKDHAKLAGSVPSGRVLVDGLGVGDVGNIVLRDRKHLAEDGLMVVVVTISKETG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + + K V + Q ++ +L+ +I +L+ L Sbjct: 478 KIAAGPDIISRGF-VYVRESEVLIDDAKKVVRKALDGCEQQNIREWAVLKSAIRDSLKEL 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 537 LYEKTKRRPMILPVIMEV 554 >gi|295101528|emb|CBK99073.1| conserved hypothetical protein [Faecalibacterium prausnitzii L2-6] Length = 595 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 288/555 (51%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM +Y I++DCG+ FP +D+ GVD+V PD TF+++ + Sbjct: 47 IHIYPLGGLGEVGKNMTVYECC----GDMIIVDCGLVFPDNDMFGVDMVIPDFTFVVQNK 102 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G++ L +P+Y + GL+ K ++ K + Sbjct: 103 DKIKGLLITHGHEDHIGSIPYLLQKFDLPIYGTRLTCGLIRNKLEEFGLAGKTKFVEITP 162 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K+ +G F++E + VNHSIP+ +A I SP G I+ TGD+K+D + TD +L Sbjct: 163 RQKLKLGCFTVEPIHVNHSIPDAVAFAIDSPAGTIIQTGDFKIDYTPLACGPTDLATLSE 222 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 G +G+LAL+ DSTNA R G +E+ + + + A+ +++ TF+S++ R++ II Sbjct: 223 YGQKGVLALLSDSTNAERPGFTATEQKVAAGVRSLFARAQNKRIIIATFASNIYRVQQII 282 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ G S+ ++A ++G + + +S + YP EQ++++ TGSQG Sbjct: 283 DLAVEDGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISIDEINQYPPEQVVLVTTGSQG 342 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ R V++ D +I S++ IPGNE ++ I N L+ G VI E Sbjct: 343 EPLSALSRMASCSHRQVRVGPGDFIIISAKPIPGNEKSVTKIVNGLLLLGAEVIYEGM-Y 401 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH + K M RP+ + +HGE L H A GI + NG Sbjct: 402 DVHVSGHACQEEQKLMLTLTRPKYFLPVHGEYKQLKKHAITAASLGIPTSNILIAENGSN 461 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L D +++ + V G + DG +G ++ + R+ LS G + + +D+ + Sbjct: 462 IILSQDEMKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVL 521 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + V T + +D ++ + AL S + + Sbjct: 522 AGPDLVSRGF-VYVRENESLMDGAQSIVETALDRCVDEHVRDWNSVKTRVREALSSYIYR 580 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 581 RTKRSPMILPILMEV 595 >gi|228945312|ref|ZP_04107667.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814284|gb|EEM60550.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 564 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ ++ + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|160943991|ref|ZP_02091221.1| hypothetical protein FAEPRAM212_01492 [Faecalibacterium prausnitzii M21/2] gi|158444667|gb|EDP21671.1| hypothetical protein FAEPRAM212_01492 [Faecalibacterium prausnitzii M21/2] Length = 609 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 288/555 (51%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM +Y + I++DCG+ FP ++ GVD+V PD TF+++ + Sbjct: 61 IHIYPLGGLGEVGKNMTVYE----CNGDMIIVDCGLVFPDSEMFGVDMVIPDFTFVVQNK 116 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G++ L + +PVY + GL++ K ++ K + Sbjct: 117 DKIKGLLITHGHEDHIGSIPYLLQKISLPVYGTRLTCGLIKNKLEEFGLAGKTKFVEIVP 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K+ +G F++E + VNHSIP+ +A I SP G I+ TGD+K+D + VTD +L Sbjct: 177 RQKIKLGCFTVEPIHVNHSIPDAVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLSTLSE 236 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 G G+LAL+ DSTNA R G +E+ + + + A+ +++ TF+S++ R++ II Sbjct: 237 YGQRGVLALLSDSTNAERPGFTATEQKVAAGVRSLFARARNKRIIIATFASNIYRVQQII 296 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ G S+ ++A ++G + + +S + YP EQ++++ TGSQG Sbjct: 297 DLAVEDGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPPEQVVLVTTGSQG 356 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ R V++ D +I S+ IPGNE ++ I N L+ G VI E Sbjct: 357 EPLSALSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESM-Y 415 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH + K M +P+ + +HGE L H A GI + NG Sbjct: 416 DVHVSGHACQEEQKLMLTLTKPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSN 475 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L D +++ + V G + DG +G ++ + R+ LS G + + +D+ + Sbjct: 476 VILSQDEMKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVL 535 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + V + +D ++ + AL S + + Sbjct: 536 AGPDLVSRGF-VYVRENESLMDGAQSIVENALERCVDEHVRDWNSVKTRVREALSSYIYR 594 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 595 RTKRSPMILPILMEV 609 >gi|303231742|ref|ZP_07318465.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] gi|302513691|gb|EFL55710.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] Length = 724 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 173 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDAGLAFPSEDMLGVDIVIPDMSYI 228 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L ++ PVYA+ GL+E K +VS K Sbjct: 229 IENKDRVKAVVITHGHEDHIGSLAYLMKEINCPVYATNLVCGLIEGKFKEHKVSPKCL-R 287 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G + ++ NHSIP+++A+ +P+G ++HTGD+K+D + G + D Sbjct: 288 TIAAGDEVQIGQVKVGFIQTNHSIPDSVAVYFDTPIGTVLHTGDFKIDQTPVDGKLMDIH 347 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LALM DSTN + G SE + I + AKG V++ TF+S+VSRI+ Sbjct: 348 KFAELGNKGVLALMSDSTNVEKPGFTGSESSVGPAIKQAVGAAKGRVVLATFASNVSRIQ 407 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 408 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 467 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 468 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCHVVYGK 527 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 528 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 586 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 587 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDTASG 646 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 647 TIIAGPDLVSRGF-VYVRDAEELMLEAERRVHQVLDDCEAQRIKDWTTIKQNVRDALGKF 705 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 706 FYDKTRRRPMILPIIQDV 723 >gi|167633283|ref|ZP_02391608.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0442] gi|170686219|ref|ZP_02877441.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0465] gi|254683198|ref|ZP_05147059.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254740959|ref|ZP_05198647.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|167531321|gb|EDR93999.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0442] gi|170669916|gb|EDT20657.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0465] Length = 557 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 289/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ I GNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPISGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|255527850|ref|ZP_05394698.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296185451|ref|ZP_06853861.1| hypothetical protein CLCAR_0874 [Clostridium carboxidivorans P7] gi|255508461|gb|EET84853.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296050285|gb|EFG89709.1| hypothetical protein CLCAR_0874 [Clostridium carboxidivorans P7] Length = 555 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 181/558 (32%), Positives = 307/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E++ +PLGG+ EIG N+ Y ++IDCG+SFP D++ G+DLV PDIT++ Sbjct: 4 EKEKIKIIPLGGLNEIGKNLTAIEY----KNDIVVIDCGLSFPDDEMLGIDLVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + IF+TH HEDH GAL + ++VPVY + +G+++ K + + Sbjct: 60 QKNIEKVKGIFLTHGHEDHIGALPYVLKEMNVPVYGTKLTLGIIQTKLKEHNLLSVVELK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V + S+E +R +HSI +++A+ I +P+G I+HTGD+K+D I G V D Sbjct: 120 CVKPKDIVKLENVSVEFIRTSHSIADSVAIAIHTPIGVILHTGDFKIDYTPIDGCVADLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G G+L ++ DSTN R G +SE + + I NAKG ++V TF+S++ RI+ Sbjct: 180 RFAELGKRGVLVMLADSTNVERPGYTMSESTVGETFGRIFTNAKGRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II + + RK+ + G S++ ++ VA+++G I +F++ ++ YP ++ ++ TG Sbjct: 240 QIITESIKYNRKVAVSGRSMENIMEVAMELGYIDANKDVFINVDNINKYPNNRITIVTTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ E + V + D VI S+ AIPGNE I + N+L ++G VI E Sbjct: 300 SQGEPMSALSRMASSEHKKVNIIPGDRVIISASAIPGNEKLISKVINQLFKKGADVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M+ ++P+ + +HGE HL H ELA++ G+ V N Sbjct: 360 L-ADVHVSGHACQEELKLMHTLVKPKFFMPVHGEYRHLKQHAELAVKLGLPSSNVVIADN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + D I V+ G DG +G ++ + R+ LS G L+V V ++ Sbjct: 419 GDVIEVTRDSIRKNGTVISGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKESG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + + + V + + + ++ +I LR Sbjct: 479 SVIAGPDIISRGF-VYVRESEDLMEEARELVKDALKKCEEKHITEWASIKSNIKEVLRVF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 538 LYERTRRKPMILPIIMEI 555 >gi|304440510|ref|ZP_07400397.1| metallo-beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370988|gb|EFM24607.1| metallo-beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 563 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 190/559 (33%), Positives = 303/559 (54%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ EIG NM + Y I++DCG++FP+D++ G+D+V PD T++ Sbjct: 12 NNNKLKIIPLGGLHEIGKNMTVVEY----RDSIIIVDCGLTFPEDEMLGIDIVIPDFTYL 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + + +TH HEDH GA+ L L +P+Y +P +GLLE K R+ + Sbjct: 68 INNKNKIKGLVLTHGHEDHIGAVPYLLKELDIPIYGTPLTMGLLENKLKEHRIPLSCLKV 127 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q GD++ +G F +E VRVNHSIP++ ++ I+SP+GN+ TGD+K+D I G+ D Sbjct: 128 VNQ-GDRIKLGKFEVEWVRVNHSIPDSSSIYIKSPIGNVFVTGDFKVDFTPISGEPIDLT 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 L IG EG+LA++ +STN +R+G +SE + + I ++ +++ TF+S+V R+ Sbjct: 187 RLGEIGKEGVLAMVGESTNVLRKGYTMSESNVGETFNRIFQSCMNNRIIIATFASNVHRV 246 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ GRK+VL G S++ ++ A +G + K + Y E+ +VI T Sbjct: 247 QQIINSAEKFGRKVVLSGRSMETMMDTARRLGYVDVKKNTIIDINQMKKYKPEETVVITT 306 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ GE R ++ +D +I S+ IPGNE ++ + N+L+E G +VI E Sbjct: 307 GSQGEPMSALTRIAFGEHRKIQATAEDVIILSATPIPGNENSVAKVINKLMETGSKVIYE 366 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 +HVSGH +LK M I+P+ V HGE HL+ H ELA Q G + + Sbjct: 367 AL-SEIHVSGHACQEELKMMLSLIKPKYFVPAHGEVRHLLKHAELATQMGTDPSDIFILE 425 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG +L I V G L DG IG ++ + R+ LS G + V + + Sbjct: 426 NGDVLEFNKKSAAITGSVPSGNTLVDGLGIGDVGNIVLRDRKHLSEDGLIVVVITISKQE 485 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + V T+ + D L+ +I LR Sbjct: 486 GKVVSGPDIISRGF-VYVRESVDLMDEARDMVKKTLDKCDRKSISDWSTLKTNIREDLRG 544 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + P++ I +I Sbjct: 545 FLYHRTKRNPMILPIIMEI 563 >gi|229541258|ref|ZP_04430318.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229325678|gb|EEN91353.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 555 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 289/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L ++VP+Y A+GL+ K + ++ I Sbjct: 61 VKNADKIKGLFITHGHEDHIGGIPYLLRQINVPIYGGKLALGLIRNKLEEHGLLRQTKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIKEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEVPHFTMSERRVGESIQDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GRKI + G S++ + + D+G I+ F+ + P ++ ++ TG Sbjct: 240 QMTEAAVLAGRKIAVFGRSMEAAIEIGRDLGYIRAPKDTFIDTQQLNRLPANRVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++ G R +++ DTV+FSS IPGN +I N L G VI+ Sbjct: 300 TQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSINRTINLLYRAGADVISGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VH SGH + K M + I+P+ + IHGE L H +LA G+ + N Sbjct: 360 LN-NVHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMLRMHAKLANDCGVPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D E+ ++ G DG IG ++ + RR LS G + V V ++ N + Sbjct: 419 GEVLALGHDTAEVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVAINMNEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + + + ++ I+ L Sbjct: 479 KIASGPDIISRGF-VYMRESGDLINEAQTIITKHLNKVMERKTTQWAEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMIMPIIMEV 555 >gi|222095332|ref|YP_002529392.1| zn-dependent hydrolase [Bacillus cereus Q1] gi|221239390|gb|ACM12100.1| Zn-dependent hydrolase [Bacillus cereus Q1] Length = 557 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 287/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDIT++ Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 61 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D+G+ + NHSIP+ + +V + GN+VHTGD+K D + D Sbjct: 121 IHAESEIDLGSIKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFKFDLTPVNNQHPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 181 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + Q+ ++ TGS Sbjct: 241 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNHLDPSQVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 301 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + +HGE L H LA G+ + VRN Sbjct: 361 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPVHGEFRMLHHHSLLAESIGVEKENIFIVRN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 421 GDVVDISNEVAVQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + K L K + T+ +L + +L+ + AL Sbjct: 481 EIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREALGKF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYTNTKRKPMILPIIIEV 557 >gi|49477294|ref|YP_035826.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328850|gb|AAT59496.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 557 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 290/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIIIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|169831110|ref|YP_001717092.1| beta-lactamase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637954|gb|ACA59460.1| beta-lactamase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 554 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 183/554 (33%), Positives = 303/554 (54%), Gaps = 10/554 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +PLGG+GEIG N+ YG ++IDCG+ FP++++ G+D+V PDI ++++ Sbjct: 6 KLQIIPLGGLGEIGKNIMAVRYG----EDILVIDCGLMFPEEEMLGIDIVIPDIQYLLEN 61 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R+ + I +TH HEDH GAL + ++VPV+ + +GLLEAK S++I + Sbjct: 62 RELVRGILLTHGHEDHIGALPYVLKQINVPVFGTKLTLGLLEAKFREHVFSEEIKMVVIN 121 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + V +G FS E +RV+HS+P+ + + + +P+G ++HTGD+K+D + G+V D Sbjct: 122 PRETVHIGCFSAEFIRVSHSVPDAVGIALHTPIGTVLHTGDFKVDYTPVDGEVIDLHRFA 181 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+L ++ DSTN R G +SE+ + ++ +K ++V TF+S+V R++ + Sbjct: 182 RLGEQGVLVMLSDSTNVERPGYTLSERVVGATFDEVFGVSKERIIVATFASNVHRLQQAV 241 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 A + RK+ + G S+ VV++A ++G + ++ E PR Q++++ TGSQG Sbjct: 242 YAAHRHRRKVAVAGRSMVNVVNIASELGYLDIPAGTLINLEEANRLPRSQVVLLTTGSQG 301 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R V++ DT+I S+ IPGNE + I N L + G VI E Sbjct: 302 EPMSALTRMALGDHRQVEILPGDTIIISATPIPGNEKLVSRIINHLYKHGATVIHERV-S 360 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 HVSGH +LK M + ++P+ V IHGE LV H ELA + G+ V NG + Sbjct: 361 GTHVSGHSSAEELKLMLKLVQPKFFVPIHGEYRMLVKHAELAREMGVRPENVFVAENGNI 420 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 L I +V G L DG IG ++ + R+QL G L V V +D + Sbjct: 421 LEFTRKKGRIAGKVSSGRILVDGLGIGDVGNIVLRDRKQLGQDGILIVVVTIDPESRQVI 480 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEIV G Y + ++ + + V TT+ + ++ + AL L + Sbjct: 481 AGPEIVSRGF-VYVRESEELMEDARERVRTTLDGCTGRGVGEWSAIKSEVRDALGKFLYE 539 Query: 541 VWGKKPLVTVFINK 554 G++P++ I + Sbjct: 540 RTGRRPMILPIIME 553 >gi|228914288|ref|ZP_04077903.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845282|gb|EEM90318.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 564 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRKVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ ++ + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|284048366|ref|YP_003398705.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] gi|283952587|gb|ADB47390.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] Length = 558 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 209/558 (37%), Positives = 315/558 (56%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++L +PLGG+GEIG NM + YG I++D G++FP DD+ G+DLV PD TF+ Sbjct: 8 QQKKLSIIPLGGLGEIGKNMTAFVYG----NDMILVDAGLAFPDDDMLGIDLVIPDTTFL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 M+ + AIF+TH HEDH GAL + VPVY +P +G+L + VS C Sbjct: 64 MENKDKFKAIFLTHGHEDHIGALPYVMKDFDVPVYGTPLTLGILSGRLKENGVS-DSKCK 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G V GAF +E +RVNHSIP+ +AL I +PVG IVHTGD+K D + G VTD Sbjct: 123 MVKPGATVRAGAFRVEFIRVNHSIPDAVALAIHTPVGVIVHTGDYKFDQTPVDGQVTDYA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G +G+L LM DSTN R G SEK + K + + + A+ V+V TFSS+V RI+ Sbjct: 183 KLAEVGRKGVLLLMSDSTNIERTGYTPSEKSVGKTLDEQFRLARNRVIVATFSSNVHRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +ID A RK+ ++G S+ VV+++I++G +K + + + Y Q+ +I TG Sbjct: 243 QVIDAAVMTRRKVAVIGRSMVNVVNISIEMGYLKVPQGVLIDIDECRNYAPRQIAIITTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL ++S + R V + DTVI S+ IPGNE + + L +QG VI Sbjct: 303 SQGEPMSALTRMSNSDHRKVSIMPGDTVIISATPIPGNEKGVARTIDNLYKQGAEVIYGR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 E +HVSGH ++K M++ + P+ + +HGE HLV HK+LA+Q G+ + N Sbjct: 363 -EQGIHVSGHASQEEIKLMHRLVHPKFFMPVHGEYRHLVKHKKLAMQLGMSKDNIVIAEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ L D I I +V G L DG +G ++ + RRQLS G L V V +D + Y Sbjct: 422 GSVVDLTRDSIGISGKVTAGRVLIDGLGVGDVGNVVLRDRRQLSQDGILIVVVTIDHSTY 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + ++ + V++T+ + + L+ ++ +L Sbjct: 482 RIAAGPDIVSRGF-VYVRESEELMEGARDRVLSTLDKCHENNITEWSALKSAVRDSLGRY 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 541 LFEKTRRRPMILPLIMEI 558 >gi|218132861|ref|ZP_03461665.1| hypothetical protein BACPEC_00722 [Bacteroides pectinophilus ATCC 43243] gi|217991734|gb|EEC57738.1| hypothetical protein BACPEC_00722 [Bacteroides pectinophilus ATCC 43243] Length = 556 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 188/564 (33%), Positives = 308/564 (54%), Gaps = 17/564 (3%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ + +PLGG+ +IGMNM + S I++DCG++FP DD+ G+DLV PD Sbjct: 1 MKKEKDGTVKVIPLGGLEQIGMNMTAFE----SEDSIIVVDCGLAFPDDDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++++ + + ITH HEDH GAL + ++VPVYA+ ++E+K + + Sbjct: 57 VSYLKENISKVKGFVITHGHEDHIGALPYVLKDVNVPVYATKLTTAIIESKLKEHNMLHE 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE +R NHSI + AL I +P G IVHTGD+K+D + GD Sbjct: 117 TKRKVVKYGQSINLGCFRIEFIRTNHSIADASALAIYTPAGVIVHTGDFKVDYTPVFGDP 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D IG +G+LALMCDSTN +R G +SE+ + K +I + K +++ TF+S+ Sbjct: 177 IDLQRFGEIGKKGVLALMCDSTNVLRPGFTMSERTVGKTFDNIFNDNKQSRLIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + GRK+ + G S+ +++VA ++G + D + E Y EQ++ Sbjct: 237 VDRVQQIINCAIKYGRKVCVEGRSMVNIINVASELGYLDIPDGTLIETEQMKNYANEQIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ R V + DTVIFSS IPGNE ++ + N L +G + Sbjct: 297 LITTGSQGESMAALSRMAANLHRKVTIEPGDTVIFSSTPIPGNEKSVARVINELGMKGAK 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 VI + HVSGH ++K +Y ++P+ V +HGE HL+A KELA GI + Sbjct: 357 VIFQ----DTHVSGHACEEEIKLIYSLVKPKYAVPVHGEYRHLMAQKELAEGLGIDKDDI 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + +G +L + + E++D+V G L DG +G ++ + R+ L+ G + V + L Sbjct: 413 FVLHSGDVLEMSQEKAEVVDKVQTGAVLVDGLGVGDVGNIVLRDRQNLAENGIIVVVLTL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + + P+IV G Y + + + + V+D D ++ +I Sbjct: 473 EKYSNQLLAGPDIVSRGF-VYVRESEGLMEEARAVIEQAVLDCLDRNVTDWGKIKGTIKD 531 Query: 533 ALRSLLKKVWGKKPLVTVFINKIS 556 L L K + P++ I ++ Sbjct: 532 TLSDFLWKKMKRNPVILPIIMEVD 555 >gi|154496338|ref|ZP_02035034.1| hypothetical protein BACCAP_00626 [Bacteroides capillosus ATCC 29799] gi|150274421|gb|EDN01498.1| hypothetical protein BACCAP_00626 [Bacteroides capillosus ATCC 29799] Length = 598 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 174/556 (31%), Positives = 295/556 (53%), Gaps = 10/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+L + LGG+ EIG N+ +Y YG I++D G+ FP DD+ G+D+V PD ++++K Sbjct: 49 EKLKIISLGGLNEIGKNVTVYEYG----GDIIVVDVGMGFPDDDMYGIDVVIPDFSYLIK 104 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IF+TH HEDH G++ L + P+YA+ GL++ K R+ K I+ Sbjct: 105 NKDKIRGIFLTHGHEDHIGSIPYLLRDVQAPIYATRMTAGLVKLKLEEHRLLDKTKLITC 164 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++G+ V G FS+E + VNHSI + I+ PVG +HTGD+K+D + G + D L Sbjct: 165 ESGETVKAGKFSVEFIHVNHSIADACGFAIKCPVGVCIHTGDFKIDATPVSGGMIDLARL 224 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DSTN R G SE+ + + + + + ++VTTF+S+V R++ I Sbjct: 225 GQLGKEGVLALLADSTNVERPGFTKSERSVGASFDALFRGCEERIIVTTFASNVDRMQQI 284 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I +A + GRK+ + G S++ + V+ ++G + + + P+ ++ +I TGSQ Sbjct: 285 ISVAAKYGRKVAVTGRSMENAIKVSTELGYMNIPAGVLVDVNHLKSLPKNKVCIITTGSQ 344 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE SAL +++ R V + D VI S+ AIPGNE AIG + N L +G V+ E A Sbjct: 345 GETMSALTRMAFSTHRQVDIQAGDRVIISASAIPGNENAIGSVINELYRKGAEVVNERA- 403 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 P+HVSGH ++LK ++ ++P+ + +HGE L H +LA + G+ + GK Sbjct: 404 APLHVSGHACQDELKIIHALVKPKFFIPVHGEQRMLKTHAKLAREMGMDPNNILISDIGK 463 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 ++ + I V G DG+ +G + + R+ L+ G + V + + Sbjct: 464 VMEFTRNTARINGTVPAGRVFVDGYGVGDVGAVVLRDRKHLAEDGMIVVVATMSAEDGAL 523 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + + + L + + + R KD ++ I + L + L Sbjct: 524 LSGPDIITRGF-VYVKESEGLMEELKRVAMEAIEACQDQRLKDWSAIKTQIKNDLSAFLY 582 Query: 540 KVWGKKPLVTVFINKI 555 K + P++ I + Sbjct: 583 KKTKRNPMILPVIMDV 598 >gi|295104812|emb|CBL02356.1| conserved hypothetical protein [Faecalibacterium prausnitzii SL3/3] Length = 609 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 288/555 (51%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM +Y + I++DCG+ FP ++ GVD+V PD TF+++ + Sbjct: 61 IHIYPLGGLGEVGKNMTVYE----CNGDMIIVDCGLVFPDSEMFGVDMVIPDFTFVVQNK 116 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G++ L + +PVY + GL++ K ++ K + Sbjct: 117 DKIKGLLITHGHEDHIGSIPYLLQKISLPVYGTRLTCGLIKNKLEEFGLAGKTKFVEIVP 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K+ +G F++E + VNHSIP+ +A I SP G I+ TGD+K+D + VTD +L Sbjct: 177 RQKIKLGCFTVEPIHVNHSIPDAVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLSTLSE 236 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 G G+LAL+ DSTNA R G +E+ + + + A+ +++ TF+S++ R++ II Sbjct: 237 YGQRGVLALLSDSTNAERPGFTATEQKVAAGVRSLFARARNKRIIIATFASNIYRVQQII 296 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ G S+ ++A ++G + + +S + YP EQ++++ TGSQG Sbjct: 297 DLAVEDGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPPEQVVLVTTGSQG 356 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ R V++ D +I S+ IPGNE ++ I N L+ G VI E Sbjct: 357 EPLSALSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESM-Y 415 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH + K M +P+ + +HGE L H A GI + NG Sbjct: 416 DVHVSGHACQEEQKLMLTLTKPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSN 475 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L D +++ + V G + DG +G ++ + R+ LS G + + +D+ + Sbjct: 476 VILSQDEMKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVL 535 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + V + +D ++ + AL S + + Sbjct: 536 AGPDLVSRGF-VYVRENESLMDGAQSIVENALERCVDEHVRDWNSVKTRVREALSSYIYR 594 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 595 RTKRSPMILPILMEV 609 >gi|229121261|ref|ZP_04250492.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|228662106|gb|EEL17715.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] Length = 564 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 287/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPEFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|303229778|ref|ZP_07316558.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] gi|302515538|gb|EFL57500.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] Length = 724 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 173 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDAGLAFPSEDMLGVDIVIPDMSYI 228 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L ++ PVYA+ GL+E K +VS K Sbjct: 229 IENKDRVKAVVITHGHEDHIGSLAYLMKEINCPVYATNLVCGLIEGKFKEHKVSPKCL-R 287 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G + ++ NHSIP+++A+ +P+G ++HTGD+K+D + G + D Sbjct: 288 TIAAGDEVQIGQVKVGFIQTNHSIPDSVAVYFDTPIGTVLHTGDFKIDQTPVDGKLMDIH 347 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LALM DSTN + G SE + I + AKG V++ TF+S+VSRI+ Sbjct: 348 KFAELGNKGVLALMSDSTNVEKPGFTGSESSVGPAIKQAVGAAKGRVVLATFASNVSRIQ 407 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 408 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 467 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 468 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCHVVYGK 527 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 528 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 586 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 587 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDTASG 646 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 647 TIIAGPDLVSRGF-VYVRDAEELMLEAERRVHQVLDDCEAQRIKDWTTIKQNVRDALGKF 705 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 706 FYDKTRRRPMILPIIQDV 723 >gi|292670950|ref|ZP_06604376.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292647571|gb|EFF65543.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 569 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 183/556 (32%), Positives = 309/556 (55%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+GEIG NM + +++D G+ FP++D+ GVDLV PDIT++++ Sbjct: 21 QKVQVIPLGGLGEIGKNMTAIR----VDDEILVVDSGLMFPEEDMLGVDLVIPDITYLIE 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AI +TH HEDH GAL + + PVY + +G+LE + V S Sbjct: 77 NKDKVNAIVLTHGHEDHIGALPYVMKQIPAPVYGTRLTLGILEGRLKENGV-DSANLHSV 135 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AGD +++G FS+ +RVNHSIP+ + L I++PVG IVHTGD+KLD + G +TD Sbjct: 136 MAGDIINIGCFSVGFIRVNHSIPDAVGLSIKTPVGMIVHTGDFKLDYTPVDGQMTDFRRF 195 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GN+G+L L+ DSTNA R+G SE+ + N +G ++V TFSS+V RI+ + Sbjct: 196 SDLGNKGVLLLLADSTNAERDGHTASERTVGAAFDKAFHNMRGRIIVATFSSNVHRIQQV 255 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + R++ +LG S++ VV +++++G + + +S + + +Q++++ TGSQ Sbjct: 256 IDTAVKYNRRVAVLGRSMENVVGISLELGYLTAPEGTIISIDEVNNFRADQIVIVTTGSQ 315 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL++++ + R + + DTVI S+ IPGNE + + L++ G VI + Sbjct: 316 GEPMSALSRMASSDHRKITIVPGDTVIISATPIPGNEKLVSKTVDNLMKLGANVIYGR-D 374 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH +LK M+ +RP+ + +HGE HLV H +LA + + NG+ Sbjct: 375 KGIHVSGHGSREELKLMHNLVRPKFFMPVHGEYHHLVQHADLARELGMPKENIFISENGQ 434 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + +++ V G+ + DG +G ++ + RRQLS G L + V +D N + Sbjct: 435 ILEFTKEKGQVVGRVQSGMVMVDGLGVGDVGNIVLRDRRQLSQDGILIIVVTMDRQTNQV 494 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + + V + ++ ++ ++ AL L Sbjct: 495 VSGPDIVSRGF-VYVRESEALMEEARARVQQALDRCEDENVREWSAIKSNVRDALSRYLF 553 Query: 540 KVWGKKPLVTVFINKI 555 ++P++ I +I Sbjct: 554 DKTRRRPMILPIIMEI 569 >gi|89099386|ref|ZP_01172263.1| hypothetical protein B14911_22447 [Bacillus sp. NRRL B-14911] gi|89085995|gb|EAR65119.1| hypothetical protein B14911_22447 [Bacillus sp. NRRL B-14911] Length = 555 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 163/558 (29%), Positives = 289/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY A+GLL K + +K I Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLALGLLRNKLEEHGLLRKTRMI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP++ +V+++P G +VHTGD+K D + + + Sbjct: 121 EIKEDDIIKFRKTSVTFFRTTHSIPDSYGVVVKTPPGQVVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKDGVLCLLSDSTNSEIPNFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ +++ ++G I +F+ + P Q+ ++ TG Sbjct: 240 QVIEAAVTNGRKVAVFGRSMEAAINIGRELGYISAPKDVFIDAQQINRLPANQVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQINPGDTVVFSSSPIPGNTISVSRTINMLSRAGAEVIHGP 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA+ GI + N Sbjct: 360 LN-DIHTSGHGGQQEQKLMLRLIKPKFFMPIHGEYRMQKMHSKLAIDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D ++ ++ G DG +G ++ + RR LS G + V V ++ + Sbjct: 419 GEVLALSEDTAQVAGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVVVVVSINMKDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + + + ++ I+ L Sbjct: 479 KISAGPDIISRGF-VYMRESGDLISDAQSLISKHLNKVMERKTTQWSEIKNEITDTLSPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|206975012|ref|ZP_03235927.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus H3081.97] gi|206747031|gb|EDZ58423.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus H3081.97] Length = 557 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 180/558 (32%), Positives = 287/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDIT++ Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 61 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D+G+ + NHSIP+ + +V + GN+VHTGD+K D + D Sbjct: 121 IHAESEIDLGSIKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFKFDLTPVNNQHPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 181 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + Q+ ++ TGS Sbjct: 241 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNHLDPSQVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 301 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 361 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 421 GDVVDISNEVAVQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + K L K + T+ +L + +L+ + AL Sbjct: 481 EIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREALGKF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYTNTKRKPMILPIIIEV 557 >gi|196045163|ref|ZP_03112396.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB108] gi|225863568|ref|YP_002748946.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB102] gi|196024165|gb|EDX62839.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB108] gi|225787795|gb|ACO28012.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB102] Length = 557 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 180/562 (32%), Positives = 291/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDI Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I A ++D+G+ + NHSIP+ + + +P GN+VHTGD+K D + Sbjct: 117 ELIVIHAESEIDLGSIKTTFFKTNHSIPDCLGIAFHTPEGNVVHTGDFKFDLTPVNNQHP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +D VI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDMVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEEAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|229098443|ref|ZP_04229387.1| Ribonuclease J 1 [Bacillus cereus Rock3-29] gi|229104581|ref|ZP_04235245.1| Ribonuclease J 1 [Bacillus cereus Rock3-28] gi|229117470|ref|ZP_04246844.1| Ribonuclease J 1 [Bacillus cereus Rock1-3] gi|228665975|gb|EEL21443.1| Ribonuclease J 1 [Bacillus cereus Rock1-3] gi|228678828|gb|EEL33041.1| Ribonuclease J 1 [Bacillus cereus Rock3-28] gi|228684966|gb|EEL38900.1| Ribonuclease J 1 [Bacillus cereus Rock3-29] Length = 555 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 159/559 (28%), Positives = 284/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTSQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G V+ Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGANVVHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|118477147|ref|YP_894298.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118416372|gb|ABK84791.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] Length = 564 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 290/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDIT++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D+G+ + NHSIP+ + +V + GN+VHTGD+K D + D Sbjct: 128 IHAESEIDLGSIKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEEAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|168186826|ref|ZP_02621461.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] gi|169295218|gb|EDS77351.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] Length = 555 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 176/561 (31%), Positives = 305/561 (54%), Gaps = 12/561 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK +++ +PLGG+ E+G N+ + Y + +IDCG+ FP D++ G+D+V PD+ Sbjct: 1 MKREKDKIKIIPLGGLEEVGKNLTVIEY----KNEIAVIDCGLKFPDDEMLGIDVVIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +++K ++ + IF+TH HEDH GAL + L+VPVY + IG++E + + Sbjct: 57 GYLLKNKEKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVENRLKESGLLSSC 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 Q D + + SIE +R +HSI ++ A+ I +P+G I+HTGD+K+D I G V Sbjct: 117 TLNRVQPRDIIKLDNMSIEFIRTSHSIADSAAIAIHTPLGVILHTGDFKIDYTPIDGQVA 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G++A++ DSTN R+G +SE+ + K +I A G ++V TF+S++ Sbjct: 177 DLSRFVELGKKGVIAMLADSTNVERKGYTMSERTVGKTFENIFSKADGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVI 297 RI+ II +E+IGRK+ + G S++ +V VA ++G + +D +S + Y +++ +I Sbjct: 237 RIQQIITASEKIGRKVAVSGRSMENIVGVASELGYLKFEDGTLISIDDIKKYSNDRITII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL++++ + + V + D VI S+ IPGNE + + N+L +QG VI Sbjct: 297 TTGSQGEPMSALSRMASSDHKKVSIIPGDMVIISATPIPGNEKLVSKVINQLFKQGANVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 E VHVSGH +LK ++ ++P+ + +HGE L H ELA++ Sbjct: 357 YEAL-ADVHVSGHACQEELKLIHTLVKPRFFIPVHGEYRMLKQHAELAVKLGMPEKNAII 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V+ G DG +G ++ + RR LS G L+V V + Sbjct: 416 SENGDVIEVTRDSIKKSGSVMSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVVTIGK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + V + + + + +++ + L Sbjct: 476 ETGKVIAGPDIISRGF-VYVRESEDLMEEARVIVRNALRECEEKHITEWAVIKSKVKEVL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R L + +KP++ I ++ Sbjct: 535 RMFLYEKTKRKPMILPIIMEV 555 >gi|332981856|ref|YP_004463297.1| RNA-metabolising metallo-beta-lactamase [Mahella australiensis 50-1 BON] gi|332699534|gb|AEE96475.1| RNA-metabolising metallo-beta-lactamase [Mahella australiensis 50-1 BON] Length = 556 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 304/557 (54%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L PLGG+ EIG NM +Y YGS I++DCG +FP+DD+PGVDLV PD ++++ Sbjct: 6 KTKLKVTPLGGINEIGKNMTVYEYGS----DMILVDCGSTFPEDDMPGVDLVIPDTSYLV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K + L I +TH HEDH GAL + ++VPVY + +GL+E K +S + + Sbjct: 62 KIKDKLKGIVLTHGHEDHIGALPYVLKEINVPVYGTRMTLGLVENKLKEFGLSTSVKLVH 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +AG K+ +GAF +E + VNHSI T++L IR PVG IVHTGD+K+D I G+V D Sbjct: 122 VEAGSKIQLGAFEVELINVNHSIAGTVSLAIRCPVGLIVHTGDFKVDYTPIDGEVIDLGR 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+LA+ DSTN R G +SE + + I + G ++V +F+S+V RI+ Sbjct: 182 FAQLGQEGVLAMFADSTNVERPGYTMSESVVGETFDRIFAESTGRIIVASFASNVHRIQQ 241 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I+ A RKIV+ G S+ VV+VA ++G + D + + +P E+++++ TGS Sbjct: 242 AINSALTFDRKIVISGRSMVNVVNVATELGYLSVPDGAIIDVDKMNSFPPERILILTTGS 301 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SALA+++ E + +++ D +I S+ IPGNE I + N L ++G VI E Sbjct: 302 QGEPMSALARMAASEHKKIEIMPGDLIIISAMPIPGNEKMIHRVINELFQKGADVIYESL 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +HVSGH +LK +++ +RP+ + +HGE HL H LA G+ + G Sbjct: 362 D-EIHVSGHACQEELKLIHKLVRPKYFIPVHGEYRHLKRHAMLAESLGMPPENIFIPDIG 420 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 + ++ V G L DG +G ++ + R+ LS G + V V +D Sbjct: 421 ATMEFSETSCKVAGSVPAGSVLVDGLGVGDVGNIVLRDRKHLSQDGLMVVVVTIDKETGT 480 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 P+I+ G Y + + + V + + + + ++ ++ +I L+ L Sbjct: 481 SIAGPDIISRGF-VYVRESEALMEQAKAVVKSVLEECRNGKVREWTTIKSNIRDELKKFL 539 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 540 YEKTKRNPMILPVIMEV 556 >gi|15894960|ref|NP_348309.1| metal-dependent hydrolase [Clostridium acetobutylicum ATCC 824] gi|15024646|gb|AAK79649.1|AE007678_5 Predicted metal-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] gi|325509097|gb|ADZ20733.1| metal-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum EA 2018] Length = 555 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 318/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +++ +PLGGV EIG N+ + Y + +IDCG+SFP +++ G+DLV PD+T++ Sbjct: 4 EKDKIKIIPLGGVDEIGKNLTVIEY----REEIAVIDCGLSFPDEEMFGIDLVIPDVTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R+ + IF+TH HEDH GAL + L+VPVY + IG++E K + K+ Sbjct: 60 IKNREKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVETKLKEHNLLSKVDLK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + + + SIE +R +HSI +++A+ I +P+G ++HTGD+K+D I G V D Sbjct: 120 VVKPRDIIKLNSMSIEFIRQSHSIADSVAIAIHTPMGVVLHTGDFKVDYTPIDGCVADFA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G G+LA+MCDSTN R G +SE + + + AKG ++V TF+S++ RI+ Sbjct: 180 RFAELGKRGVLAMMCDSTNVERPGYTMSETTVGETFNTVFTKAKGRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++ AE+ RK+ + G S++ +V+VAI++G +K K+ + + ++ Y ++++I TG Sbjct: 240 QIVEAAERYNRKVAVSGRSMENIVAVAIELGYLKVKEGVLIGIDAINRYADNKIVIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ E + VK+ E D V+ S+ IPGNE + + N+L ++G VI E Sbjct: 300 SQGEPMSALTRMAAQEHKKVKIQEGDMVVISANPIPGNEKLVSRVINQLFKKGAEVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M+ I+P+ + +HGE HL HKELA G+ V Sbjct: 360 L-ADVHVSGHACQEELKLMHTLIKPRFFIPVHGEYRHLKQHKELATNLGMPKANVVIPEI 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ L I+ D VV G DG +G ++ + R+ LS G ++V V ++ Sbjct: 419 GGVIELTRSSIKKTDTVVAGKVFVDGLGVGDVGNIVLRDRKHLSQDGIVTVVVTIEKVSG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + + + + V T +++ + + ++ +I LR Sbjct: 479 TVIAGPDIISRGF-VYVRESEDLMEESKEIVKTALLECEEKHITEWATIKSNIKDVLRIF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 538 LYERTKRKPMILPIIMEV 555 >gi|229183901|ref|ZP_04311117.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228599553|gb|EEK57157.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] Length = 564 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 289/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDIT++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D+G+ + NHSIP+ + + +P GN+VHTGD+K D + D Sbjct: 128 IHAESEIDLGSIKTTFFKTNHSIPDCLGIAFHTPEGNVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +D VI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDMVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEEAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 488 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|118443342|ref|YP_878348.1| metallo-beta-lactamase superfamily hydrolase [Clostridium novyi NT] gi|118133798|gb|ABK60842.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Clostridium novyi NT] Length = 555 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 306/561 (54%), Gaps = 12/561 (2%) Query: 1 MKN--EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK +++ +PLGG+ E+G N+ + Y + +IDCG+ FP D++ G+D+V PDI Sbjct: 1 MKKEKDKVKIIPLGGLEEVGKNLTVIEY----KNEIAIIDCGLKFPDDEMLGIDVVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +++K ++ + IF+TH HEDH GAL + L+VPVY + IG++E + + Sbjct: 57 GYLLKNKEKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVENRLKESGLLSSC 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 Q D + + +IE +R +HSI ++ A+ + +P+G I+HTGD+K+D I G V Sbjct: 117 TLNRVQPRDIIKLDNMAIEFIRTSHSIADSAAIAVHTPLGIILHTGDFKIDYTPIDGQVA 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D +G +G++A++ DSTN R+G +SE+ + K +I A G ++V TF+S++ Sbjct: 177 DLPRFVELGKKGVIAMLADSTNVERKGYTMSERTVGKTFENIFSKADGRIIVATFASNIH 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVI 297 RI+ II +E+IGRK+ + G S++ +V+VA ++G + +D +S + Y +++ +I Sbjct: 237 RIQQIITASEKIGRKVAVSGRSMENIVAVASELGYLKFQDGTLISIDDIKKYSNDRITII 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL++++ + + V + D VI S+ IPGNE + + N+L +QG VI Sbjct: 297 TTGSQGEPMSALSRMASSDHKKVSIIPGDMVIISATPIPGNEKLVSKVINQLFKQGANVI 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 E VHVSGH +LK ++ ++P+ + +HGE L H ELA++ Sbjct: 357 YEAL-ADVHVSGHACQEELKLIHTLVKPKFFIPVHGEYRMLKQHAELAVKLGMPEKNAII 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG ++ + D I+ V+ G DG +G ++ + RR LS G L+V V + Sbjct: 416 SENGDVIEVTRDSIKKSGSVMSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVVTIGK 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + V + + + + +++ + L Sbjct: 476 DTGKVIAGPDIISRGF-VYVRESEDLMEEARVIVRNALRECEEKHITEWAVIKSKVKEVL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R L + +KP++ I ++ Sbjct: 535 RMFLYEKTKRKPMILPIIMEV 555 >gi|114566794|ref|YP_753948.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337729|gb|ABI68577.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 553 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 176/560 (31%), Positives = 303/560 (54%), Gaps = 12/560 (2%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M E + +PLGG+GEIG NM Y ++ID G+ FP+++L G+D+V PDI+ Sbjct: 1 MSEESRIKIIPLGGLGEIGKNMTAIRY----QDSIVIIDAGLMFPEEELLGIDIVIPDIS 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++M+ + + AI +TH HEDH G L + ++VPVY S +G++E K + Sbjct: 57 YLMENKDKVKAILLTHGHEDHVGGLPYVLKEINVPVYGSRLTLGIVEEKLKEHNLGSVQL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D + + F +E +RV+HSIP+ +A+ + +P+G ++HTGD KLD + G+V D Sbjct: 117 QVV-RPRDVISISPFEVEFIRVSHSIPDALAIALHTPLGIVLHTGDIKLDQTPVDGEVVD 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G +G+L ++ DSTNA + G +SEK + ++ +G ++VTTF+S+V R Sbjct: 176 FRKFAELGEKGVLVMLGDSTNADKNGFTMSEKVVGNTFDELFGKCEGRIIVTTFASNVHR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ +I A++ GRK+ ++G S+ V ++ +G + + + + E G YP +++++ Sbjct: 236 IQQVISTAQKYGRKVAVVGRSMVNNVRISSQLGYMNIPEGILIEMEDIGKYPAGEIVIVT 295 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ + R V + DTVI S+ IPGNE + + L QG VI Sbjct: 296 TGSQGEPMSALTRIATADHRWVAIEPGDTVIISATPIPGNEKLVAKTVDLLFRQGAEVIY 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E VHVSGH +LK + IRP+ + +HGE HL+ H +LA GI + Sbjct: 356 EKG-AGVHVSGHASQEELKILLNLIRPRYFIPVHGEYRHLMKHAKLAESLGIPRSRIFVA 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG+++ + I +V G L DG +G ++ + R+QLS G + V V ++ Sbjct: 415 ENGQIIEVGKKKAVISGKVAAGKVLVDGLGVGDVGNIVLRDRKQLSQDGIMIVVVTINKD 474 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+IV G Y + ++ + + V + + + +++ + L Sbjct: 475 SGEVVAGPDIVSRGF-VYVRESERLIENAKEKVNEALEICSKRNISEWAVIKAQVREKLG 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + G++P++ I ++ Sbjct: 534 KHLFEKTGRRPMILPIIVEV 553 >gi|229138405|ref|ZP_04266996.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] gi|228645076|gb|EEL01317.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] Length = 550 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 286/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D + Sbjct: 117 ESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDDMLIEASEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ +L + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREALGKFIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|238018385|ref|ZP_04598811.1| hypothetical protein VEIDISOL_00210 [Veillonella dispar ATCC 17748] gi|237864856|gb|EEP66146.1| hypothetical protein VEIDISOL_00210 [Veillonella dispar ATCC 17748] Length = 724 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 174 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 229 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L ++ PVYA+ GL+E K +VS K Sbjct: 230 IENKDRVKAVVITHGHEDHIGSLAYLMKEINCPVYATNLVCGLIEGKFKEHKVSPKCL-R 288 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G + ++ NHSIP++ A+ +P+G ++HTGD+K+D + G + D Sbjct: 289 TIAAGDEVQIGQVKVGFIQTNHSIPDSCAVYFDTPIGTVLHTGDFKIDQTPVDGRLMDMH 348 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LALM DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 349 KFAELGNKGVLALMSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 408 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 409 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 468 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 469 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCHVVYGK 528 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 529 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 587 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 588 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 647 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ V + + R KD +++++ AL Sbjct: 648 TIVAGPDLVSRGF-VYVRDAEELMIAAEHRVDQVLEECEMQRIKDWTTIKQNVRDALGKF 706 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 707 FYDKTRRRPMILPIIQDV 724 >gi|238926973|ref|ZP_04658733.1| metallo-beta lactamase superfamily hydrolase [Selenomonas flueggei ATCC 43531] gi|304436515|ref|ZP_07396489.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238885207|gb|EEQ48845.1| metallo-beta lactamase superfamily hydrolase [Selenomonas flueggei ATCC 43531] gi|304370561|gb|EFM24212.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 567 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 183/556 (32%), Positives = 306/556 (55%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+GEIG NM + + +++D G+ FP++D+ G+DLV PDIT++++ Sbjct: 19 QKVQVIPLGGLGEIGKNMTVIR----VDDEILVVDSGLMFPEEDMLGIDLVIPDITYLIE 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + AI +TH HEDH GAL + + PVY + +G+LE + V S Sbjct: 75 NRDMVKAIVLTHGHEDHIGALPYVMKQIPCPVYGTRLTLGILEGRLKENGV-DSTNLHSV 133 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AGD +++G FS+ +RVNHSIP+ + L I++PVG IVHTGD+KLD + G +TD Sbjct: 134 MAGDIINIGCFSVGFIRVNHSIPDAVGLSIKTPVGMIVHTGDFKLDYTPVDGQMTDFRRF 193 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GN+G+L L+ DSTNA REG SE+ + N +G ++V TFSS+V RI+ + Sbjct: 194 SDLGNKGVLLLLADSTNAEREGHTASERTVGAAFDKAFHNVRGRIIVATFSSNVHRIQQV 253 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + R++ +LG S++ VV +++++G + + + + Y EQ++++ TGSQ Sbjct: 254 IDTAVKYKRRVAVLGRSMENVVGISLELGYLTAPEGTIIGIDEINNYRAEQIVIVTTGSQ 313 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL++++ + R + + DTVI S+ IPGNE + + L++ G VI + Sbjct: 314 GEPMSALSRMAASDHRKITIVPGDTVIISATPIPGNEKLVSKTVDNLMKLGANVIYGR-D 372 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH +LK M+ +RP+ + +HGE HLV H LA + + NG+ Sbjct: 373 KGIHVSGHGSREELKLMHNLVRPKFFMPVHGEYHHLVQHAGLARELGMPKENIFISENGQ 432 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + +++ V G+ + DG +G ++ + RRQLS G L + V + N + Sbjct: 433 VLEFTKEKGQVVGRVQSGMVMVDGLGVGDVGNIVLRDRRQLSQDGILIIVVAMSRQSNRV 492 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + V + ++ ++ ++ AL L Sbjct: 493 VSGPDIVSRGF-VYVRESEALMDEARARVQQALDRCEDENVREWSAIKSNVRDALSRYLF 551 Query: 540 KVWGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 552 DKTRRRPMILPIIMEV 567 >gi|300117369|ref|ZP_07055159.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] gi|298725204|gb|EFI65856.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] Length = 550 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 288/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ + NHSIP+ + + +P G +VHTGD+K D + D + Sbjct: 117 ESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + +I Sbjct: 417 VDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADGDII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ +L + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|312143633|ref|YP_003995079.1| RNA-metabolising metallo-beta-lactamase [Halanaerobium sp. 'sapolanicus'] gi|311904284|gb|ADQ14725.1| RNA-metabolising metallo-beta-lactamase [Halanaerobium sp. 'sapolanicus'] Length = 558 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 182/559 (32%), Positives = 300/559 (53%), Gaps = 11/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + + LGGVGEIG NM + G ++ID GV FP++DL G+DLV PD ++ Sbjct: 6 KIKNVTMTTLGGVGEIGKNMWVLEIG----EDMLIIDSGVKFPENDLLGIDLVIPDFEYV 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + I +TH H DH G L L ++ P+Y + +GLLE R+ K Sbjct: 62 IKNKDRINGIVLTHGHLDHIGGLPYLLKEINAPIYGTKLTLGLLEGNLKEHRLLKDCRLK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +G ++ VG F++E +RVNHSI +T AL I +P+G IV+ D+K D + G+V D Sbjct: 122 IVHSGKEIQVGNFTVEFIRVNHSIADTCALAIHTPLGPIVYASDFKFDQTPVDGEVADFH 181 Query: 182 SLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+ EG+LAL DSTN R+G +SEK + + + +I + AK ++V TF+S++ R Sbjct: 182 KFAELGDSPEGVLALFSDSTNVERDGYTLSEKVVGETVDEIFRGAKERIIVATFASNIHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + RK+ G S+ V +A +G ++ + + + P ++ ++ Sbjct: 242 VQQVVDAAFKYNRKVAFTGRSMLNNVDIARRLGYLQVPEDMIVDIRDCSSLPDNEVTLLT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++RG+ ++ + E DTV+ S+ AIPGNE +G N+L +G VI Sbjct: 302 TGSQGEPMAALTRMARGDHYHINIKEGDTVMISASAIPGNEKYVGETINKLFRRGANVIY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 ED VHVSGH +LK M ++P+ V +HGE HL H LA + GI + Sbjct: 362 EDV-SGVHVSGHASKEELKLMLNLVKPKYFVPVHGEYRHLYKHANLAEEVGIPRDNIYIA 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + D + D V G L DG IG ++ + R+ LS G + V V +D Sbjct: 421 DVGDKINFAEDKVSKKDNVQSGDVLIDGLGIGDVGNIVLRDRKMLSEDGIIIVVVTIDKK 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 NI P+I+ G Y + ++ + + V + + + + +L+ +I ++L + Sbjct: 481 GNILVGPDIITRGF-VYIRESEELIEAATQRVEDALKECEENNVTEWSVLKNTIRNSLNN 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + + P++ I ++ Sbjct: 540 YVYQKIKRNPMILPVIMEV 558 >gi|225387771|ref|ZP_03757535.1| hypothetical protein CLOSTASPAR_01541 [Clostridium asparagiforme DSM 15981] gi|225046132|gb|EEG56378.1| hypothetical protein CLOSTASPAR_01541 [Clostridium asparagiforme DSM 15981] Length = 704 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 294/558 (52%), Gaps = 14/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ +IGMN+ + Y I++DCG++FP DD+ G+DLV PD+T++ Sbjct: 156 KGKLKIIPLGGLEQIGMNITAFEY----EDTIIVVDCGLAFPGDDMLGIDLVIPDVTYLK 211 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ITH HEDH GAL + ++VPVY + + L+E K + + Sbjct: 212 NNIDKVKGFVITHGHEDHIGALPYILEQINVPVYGTKLTMALIEHKLKERGMMRNTKRKV 271 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G V++G F +E ++ NHSI + AL I +PVG ++HTGD+K+D + GD D Sbjct: 272 VKHGQSVNLGCFRVEYIKTNHSIQDAAALAIYTPVGTVLHTGDFKIDYTPVFGDPIDLQR 331 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRIR 241 +G +G+LALM DSTNA+R G +SE+ + K I K ++V TF+S+V R++ Sbjct: 332 FAELGKKGVLALMADSTNAIRPGFTMSERTVGKTFDAIFAEHKNNRIIVATFASNVDRVQ 391 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++ A + GRK+V+ G S+ V+ +A ++ I + + E YP E ++I+TG Sbjct: 392 QIVNTAHKYGRKVVVEGRSMVTVMEIARELDYINVPEGTLIDIEQLRNYPPESTVIISTG 451 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ + V + D V+ SS IPGNE A+ ++ N L +G VI Sbjct: 452 SQGESMAALSRMAASLHKKVTITPSDVVVLSSTPIPGNEKAVANVVNELSMRGATVI--- 508 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 HVSGH DLK +Y + P+ + IHGE H +A KELA G+ + + Sbjct: 509 -NQDTHVSGHACQEDLKLIYSLVHPKYAIPIHGEHRHRMAQKELAQFMGVEKDNAVIINS 567 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G +L L D E+ID V G DG +G ++ + R+ L+ G + V + L+ N Sbjct: 568 GDVLALSEDTCEVIDHVAAGGIFVDGLGVGDVGNIVLRDRQNLAQNGIIVVVLTLEKRSN 627 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + V+ V D D ++ I +L Sbjct: 628 QLLAGPDIVSRGF-VYVRESEDLLEEAHSVVVDAVDDCLNRHVSDWGKIKNVIKDSLSDF 686 Query: 538 LKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 687 LWKRMKRSPMILPIIMEV 704 >gi|42783073|ref|NP_980320.1| hypothetical protein BCE_4026 [Bacillus cereus ATCC 10987] gi|42739001|gb|AAS42928.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 555 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 161/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|324325728|gb|ADY20988.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 557 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 180/562 (32%), Positives = 290/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM + + ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYVIQF----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D GA + NHSIP+ + +V +P G IVHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNNLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGARVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNQVAIQSRKMQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I+ G Y D + K L K + T+ ++ + + +L+ + A Sbjct: 477 KVDGEIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTSTKRKPMILPIIIEV 557 >gi|266621750|ref|ZP_06114685.1| metallo-beta-lactamase family protein [Clostridium hathewayi DSM 13479] gi|288866575|gb|EFC98873.1| metallo-beta-lactamase family protein [Clostridium hathewayi DSM 13479] Length = 555 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 296/559 (52%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ++ +PLGG+ +IGMN+ + Y I++DCG++FP DD+ G+DLV PD+T++ Sbjct: 6 SNAKIKIIPLGGMEQIGMNITAFEY----EDSIIVVDCGLAFPSDDMLGIDLVIPDVTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GAL + ++VPVY + I L+E K + K Sbjct: 62 KQNIDKVKGFVITHGHEDHIGALPYILKEVNVPVYGTKLTIALIENKLKEHNLLKNTKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G I+HTGD+K+D + G+ D + Sbjct: 122 VIKHGQSINLGCFRIEFIKTNHSIADASALAIYSPAGVILHTGDFKIDYTPVFGEPADLE 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRI 240 +G +G+LALMCDSTNA+R G SEK + K +I + K ++V +F+S+V R+ Sbjct: 182 RFAELGKKGVLALMCDSTNAIRPGFTPSEKTVGKTFDNIFADHKFNRIIVASFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + GRK+V+ G S+ V+ A ++G I + + + YP EQ ++I T Sbjct: 242 QQVINSAAKYGRKVVVEGRSMVNVIGTASELGYIDIPEGTLIDIDQLKNYPDEQTVLITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + D V+ SS IPGNE A+ + N L +G VI Sbjct: 302 GSQGESMAALSRMAGSTHKKVSIKPTDVVVLSSTPIPGNEKAVSKVINELAMKGAEVI-- 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K +Y +RP+ + +HGE HL+A K L GI + + Sbjct: 360 --NQDTHVSGHACQEEIKLIYALVRPKYAIPVHGEYRHLMAQKSLVQAMGIPKDNIVIMS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G ++ L + I+D V G L DG +G ++ + R+ L+ G + V + L+ Sbjct: 418 SGDVVELGQESWGIVDHVQSGGILVDGLGVGDVGNIVLRDRQNLAQNGIIIVVLTLEKYS 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + V V D D ++ I +L Sbjct: 478 NQLLAGPDIVSRGF-VYVRESEDLMEDARAVVNDAVQDCLDRHVNDWGKIKNIIRDSLSD 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 537 FLWKRMKRNPMILPIIMEV 555 >gi|320528892|ref|ZP_08029984.1| hypothetical protein HMPREF9555_00038 [Selenomonas artemidis F0399] gi|320138522|gb|EFW30412.1| hypothetical protein HMPREF9555_00038 [Selenomonas artemidis F0399] Length = 575 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 185/556 (33%), Positives = 307/556 (55%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+GEIG NM + I+ID G+ FP++D+ G+DLV PDIT++++ Sbjct: 27 QKVQIIPLGGLGEIGKNMTAIR----VDDEIIVIDSGLMFPEEDMLGIDLVIPDITYLIE 82 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AI +TH HEDH GAL + + VPVY + +G+LE + V Sbjct: 83 NKDMVKAIVLTHGHEDHIGALPYVMKQIPVPVYGTRLTLGILEGRLKENGVDSSNLHSVM 142 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 GD +++G FS+ +RVNHSIP+ + L I++PVG IVHTGD+KLD + G +TD Sbjct: 143 A-GDIINIGCFSVGFIRVNHSIPDAVGLSIKTPVGMIVHTGDFKLDYTPVDGQMTDFRRF 201 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GN+G+L L+ DSTNA REG SE+ + + N +G ++V +FSS+V RI+ + Sbjct: 202 SDLGNKGVLLLLADSTNAEREGHTPSERTVGAALDKSFHNVRGRIIVASFSSNVHRIQQV 261 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + R++ +LG S++ VV +++++G + + +S + + +Q++V+ TGSQ Sbjct: 262 IDTAVKYKRRVAVLGRSMENVVGISLELGYLTAPEGTIISIDEVNNFRPDQIVVVTTGSQ 321 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL+++S + R + + DTVI S+ IPGNE + + L++ G VI + Sbjct: 322 GEPMSALSRMSTSDHRKITIVPGDTVIISATPIPGNEKLVSKTVDNLMKLGANVIYGR-D 380 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH +LK M+ +RP+ + +HGE HLV H ELA + + NG+ Sbjct: 381 KGIHVSGHGSREELKLMHNLVRPKFFMPVHGEYHHLVQHAELARELGMPKENIFISENGQ 440 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + ++ V G+ + DG +G ++ + RRQLS G L + V +D N + Sbjct: 441 ILEFTKEKGQVAGRVQAGMVMVDGLGVGDVGNIVLRDRRQLSQDGILIIVVAMDRQSNRV 500 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + V + ++ ++ ++ AL L Sbjct: 501 VSGPDIVSRGF-VYVRESEALMDEARARVQQALDRCEDENVREWSAIKSNVRDALSRYLF 559 Query: 540 KVWGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 560 DKTRRRPMILPIIIEV 575 >gi|301053248|ref|YP_003791459.1| Zn-dependent hydrolase [Bacillus anthracis CI] gi|300375417|gb|ADK04321.1| Zn-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 557 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 176/562 (31%), Positives = 289/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVARIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I +I+ G Y D + K L K + T+ ++ + + +L+ + A Sbjct: 477 KADGDIISGQDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|116872429|ref|YP_849210.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741307|emb|CAK20429.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 555 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 161/558 (28%), Positives = 284/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 5 KNNETAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L L++P+YA A L+ K + ++ Sbjct: 61 VKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ D SI R HSIP+T +V+++P GNIVHTGD+K D + + + Sbjct: 121 EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA +SE+ + ++I +I ++ +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKI + G S++ + + +G I+ F+ P + ++ TG Sbjct: 240 QVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN ++ N L + G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H + A + G+ + N Sbjct: 360 VN-NIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAQSAEECGVPEENSFIMAN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + ++ DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNS 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + + + ++ I+ L+ Sbjct: 479 RVMAGPDIISRGF-IYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|311029752|ref|ZP_07707842.1| ribonuclease J1 [Bacillus sp. m3-13] Length = 555 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 166/558 (29%), Positives = 290/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNNQAAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + +F+TH HEDH G + L + +PVY A+GL++ K + +K I Sbjct: 61 VKNQEKIKGLFVTHGHEDHIGGIPYLLREVDIPVYGGKLALGLIKNKLEEHGLLRKAKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q D + S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIQEDDIIKFRKTSVTFFRTTHSIPDSYGVVVKTPQGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I DI + G V+ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPDFTMSERRVGESIQDIFRKVDGRVIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A GRK+ + G S++ +++ ++G I+ F+ P ++ ++ TG Sbjct: 240 QVVEAAVAHGRKVAVFGRSMEAAINIGQELGYIQAPKDTFIETNQINRMPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTLSVNRTINMLFRAGADVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE + HK+LA+ G+ + N Sbjct: 360 L-SDIHTSGHGGQQEQKLMLRLIKPKYFMPIHGEYRMQITHKQLAIDCGVPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D + ++ G DG IG ++ + RR LS G + V V ++ + Sbjct: 419 GEVLALSEDEASVAGKIPSGNVYIDGNGIGDIGNIVLRDRRILSEEGLVVVVVSINMKDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + + R ++ I+ L Sbjct: 479 RIASGPDIISRGF-VYMRESGDLINDAQSLISKHLNKIMERRTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|228941138|ref|ZP_04103693.1| Ribonuclease J 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974070|ref|ZP_04134642.1| Ribonuclease J 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980663|ref|ZP_04140970.1| Ribonuclease J 1 [Bacillus thuringiensis Bt407] gi|228779067|gb|EEM27327.1| Ribonuclease J 1 [Bacillus thuringiensis Bt407] gi|228785647|gb|EEM33654.1| Ribonuclease J 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818532|gb|EEM64602.1| Ribonuclease J 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941750|gb|AEA17646.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 555 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 159/559 (28%), Positives = 281/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVIEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +A GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITNHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|160933731|ref|ZP_02081119.1| hypothetical protein CLOLEP_02592 [Clostridium leptum DSM 753] gi|156867608|gb|EDO60980.1| hypothetical protein CLOLEP_02592 [Clostridium leptum DSM 753] Length = 720 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 300/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG+ EIG N+ L+ G + ++DCG++FP D+ GVDLV PD +++ + + Sbjct: 172 IKVTFLGGLNEIGKNITLFECG----KDMFLLDCGMTFPDGDMLGVDLVIPDFSYVERNK 227 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + ITH HEDH GA+ L +VPVY +P IGL+ K + K + + Sbjct: 228 ERIKGLVITHGHEDHIGAIPYLLKTFNVPVYGTPLTIGLVSGKLKEHNLLGKAKLNTVRP 287 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 GD+V +G +E + VNHSIP+ +A+ I SP G +VHTGD+K+D G++ D Sbjct: 288 GDRVKLGCMEVELIHVNHSIPDAVAVAIHSPAGTVVHTGDFKIDCTPPQGEMIDLGRFAE 347 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +G EG+LAL+ +STNA R G ++E+ + + ++ A+ ++V +F+S+++RI+ II Sbjct: 348 LGKEGVLALLSESTNAERPGYTMTERKVADSFENLFLKAENKRIIVASFASNINRIQQII 407 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATGSQG 303 A++ GRK+ G S+ VS+A ++G + + + D Y ++Q+++I TGSQG Sbjct: 408 HCAQRHGRKVAFSGRSMLNYVSIANELGYMDVPESVIIDIDLINRYAKDQIVLITTGSQG 467 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SALA+++ + R V++ D VI S+R IPGNE +G++ N L+++G V+ E Sbjct: 468 EPMSALARMATSDHRKVEVGPDDFVIISARPIPGNEKTVGNVVNELMKRGCDVVYESM-Y 526 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +LK M +P+ + +HGE HL H +LA GI + G + Sbjct: 527 EVHVSGHACQEELKLMQGLTKPKYFIPVHGEQKHLHKHAQLAESMGIPKQNIYIGDIGGV 586 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + + D + + V G L DG +G + + R+ L G + V +D + ++ Sbjct: 587 VEINEDFMHPLAPVPAGRVLVDGLGVGDVGSIVLRDRKHLGQDGLIVVVATIDSSDGHVI 646 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + + + + +++ + + +++ + L LL Sbjct: 647 SGPDIVSRGF-VYVRESEPLMDDIKRQIVSVFESCADHKVHEWGVIKNKVKDDLGKLLYD 705 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 706 RTRRTPMILPIIMEV 720 >gi|153812699|ref|ZP_01965367.1| hypothetical protein RUMOBE_03106 [Ruminococcus obeum ATCC 29174] gi|149831215|gb|EDM86304.1| hypothetical protein RUMOBE_03106 [Ruminococcus obeum ATCC 29174] Length = 615 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 178/557 (31%), Positives = 301/557 (54%), Gaps = 14/557 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ +IGMN+ + Y +++DCG++FP+DD+ G+DLV PD+T++ Sbjct: 67 TSKLKIIPLGGLEQIGMNITAFEY----EDSIVVVDCGLAFPEDDMLGIDLVIPDVTYLK 122 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + ITH HEDH GAL + ++ PVY++ +GL+ K + + Sbjct: 123 ENISKVKGFVITHGHEDHIGALPYILKEVNAPVYSTKLTLGLITNKLKEHNLVRSTKLKE 182 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G +++G FSIE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 183 VKHGQVINLGDFSIEFIKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQR 242 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIR 241 IG +G+LALMCDSTNA R G +SE+ + ++ K +++ TF+S+V R++ Sbjct: 243 FAEIGKKGVLALMCDSTNAERPGFTMSERTVGHVFDNLFNEHKNARIIIATFASNVDRVQ 302 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A + GRK+ + G S+ ++SVA ++G ++ + + + YP E++++I TG Sbjct: 303 QIINTAYKFGRKVAVEGRSMVNIISVASELGYLRIPENTLIEIDQVKNYPDEKVVLITTG 362 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ + + + DT+IFSS IPGNE A+ + N L +G +VI + Sbjct: 363 SQGESMAALSRMAANIHKKITIKPNDTIIFSSNPIPGNEKAVSKVINELSMKGAKVIFQ- 421 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH ++K +Y +RP+ + +HGE HL A K + GI + + + Sbjct: 422 ---DVHVSGHACQEEIKLIYSLVRPKYAIPVHGEYRHLTAQKHVVEDLGIPKENIFILAS 478 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G +L L + + V G DG +G ++ + R+ LS G + V + L+ H N Sbjct: 479 GNVLELDANSAAVTGSVHTGAIFVDGLGVGDVGNIVLRDRQHLSEDGIMIVVMTLERHSN 538 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + + V + + D ++ ++ AL Sbjct: 539 VVLAGPDIVSRGF-VYVRESEDLMEDAKEVVENALDSCLERNITDWGKIKNTVKDALSDF 597 Query: 538 LKKVWGKKPLVTVFINK 554 L K + P++ I + Sbjct: 598 LWKRTKRSPMILPIIME 614 >gi|30264049|ref|NP_846426.1| hypothetical protein BA_4190 [Bacillus anthracis str. Ames] gi|47529485|ref|YP_020834.1| hypothetical protein GBAA_4190 [Bacillus anthracis str. 'Ames Ancestor'] gi|47565853|ref|ZP_00236892.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] gi|49186885|ref|YP_030137.1| hypothetical protein BAS3887 [Bacillus anthracis str. Sterne] gi|49478482|ref|YP_038038.1| metallo-beta-lactamase superfamily hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141514|ref|YP_085316.1| metallo-beta-lactamase superfamily hydrolase [Bacillus cereus E33L] gi|65321369|ref|ZP_00394328.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacillus anthracis str. A2012] gi|118479188|ref|YP_896339.1| metallo-beta-lactamase superfamily hydrolase [Bacillus thuringiensis str. Al Hakam] gi|165872873|ref|ZP_02217498.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167633673|ref|ZP_02391997.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167639412|ref|ZP_02397683.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170687269|ref|ZP_02878487.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170705755|ref|ZP_02896218.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177655199|ref|ZP_02936808.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190566024|ref|ZP_03018943.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196035791|ref|ZP_03103193.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus W] gi|196038869|ref|ZP_03106177.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196045923|ref|ZP_03113152.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|206978075|ref|ZP_03238959.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217961464|ref|YP_002340032.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218905108|ref|YP_002452942.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|222097426|ref|YP_002531483.1| hydrolase, metallo-beta-lactamase superfamily [Bacillus cereus Q1] gi|225865959|ref|YP_002751337.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227816751|ref|YP_002816760.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228916614|ref|ZP_04080180.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929024|ref|ZP_04092056.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935292|ref|ZP_04098118.1| Ribonuclease J 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947696|ref|ZP_04109986.1| Ribonuclease J 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987162|ref|ZP_04147285.1| Ribonuclease J 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229093026|ref|ZP_04224157.1| Ribonuclease J 1 [Bacillus cereus Rock3-42] gi|229123498|ref|ZP_04252697.1| Ribonuclease J 1 [Bacillus cereus 95/8201] gi|229140707|ref|ZP_04269255.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST26] gi|229157555|ref|ZP_04285632.1| Ribonuclease J 1 [Bacillus cereus ATCC 4342] gi|229186217|ref|ZP_04313386.1| Ribonuclease J 1 [Bacillus cereus BGSC 6E1] gi|229198094|ref|ZP_04324805.1| Ribonuclease J 1 [Bacillus cereus m1293] gi|229601983|ref|YP_002868277.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254683744|ref|ZP_05147604.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254721579|ref|ZP_05183368.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254736089|ref|ZP_05193795.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254743980|ref|ZP_05201663.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254754241|ref|ZP_05206276.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254758068|ref|ZP_05210095.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|301055468|ref|YP_003793679.1| metallo-beta-lactamase superfamily hydrolase [Bacillus anthracis CI] gi|30258694|gb|AAP27912.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47504633|gb|AAT33309.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|47557133|gb|EAL15462.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] gi|49180812|gb|AAT56188.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|49330038|gb|AAT60684.1| hydrolase, metallo-beta-lactamase superfamily [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974983|gb|AAU16533.1| hydrolase, metallo-beta-lactamase superfamily [Bacillus cereus E33L] gi|118418413|gb|ABK86832.1| RNase J1 [Bacillus thuringiensis str. Al Hakam] gi|164711360|gb|EDR16912.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167512471|gb|EDR87846.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167531079|gb|EDR93766.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170129295|gb|EDS98159.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170668886|gb|EDT19631.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172080249|gb|EDT65340.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190562943|gb|EDV16909.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|195991440|gb|EDX55406.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus W] gi|196023363|gb|EDX62041.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196030592|gb|EDX69191.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|206743702|gb|EDZ55125.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217068087|gb|ACJ82337.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218538526|gb|ACK90924.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|221241484|gb|ACM14194.1| hydrolase, metallo-beta-lactamase superfamily [Bacillus cereus Q1] gi|225789756|gb|ACO29973.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227005573|gb|ACP15316.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228585392|gb|EEK43499.1| Ribonuclease J 1 [Bacillus cereus m1293] gi|228597393|gb|EEK55044.1| Ribonuclease J 1 [Bacillus cereus BGSC 6E1] gi|228626005|gb|EEK82755.1| Ribonuclease J 1 [Bacillus cereus ATCC 4342] gi|228642779|gb|EEK99062.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST26] gi|228659985|gb|EEL15626.1| Ribonuclease J 1 [Bacillus cereus 95/8201] gi|228690397|gb|EEL44183.1| Ribonuclease J 1 [Bacillus cereus Rock3-42] gi|228772561|gb|EEM21004.1| Ribonuclease J 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228812216|gb|EEM58547.1| Ribonuclease J 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824457|gb|EEM70263.1| Ribonuclease J 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830831|gb|EEM76436.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843193|gb|EEM88275.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266391|gb|ACQ48028.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|300377637|gb|ADK06541.1| hydrolase, metallo-beta-lactamase superfamily [Bacillus cereus biovar anthracis str. CI] gi|324327878|gb|ADY23138.1| metallo-beta-lactamase superfamily hydrolase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 555 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|16800095|ref|NP_470363.1| hypothetical protein lin1026 [Listeria innocua Clip11262] gi|16803067|ref|NP_464552.1| hypothetical protein lmo1027 [Listeria monocytogenes EGD-e] gi|46907259|ref|YP_013648.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47092920|ref|ZP_00230701.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|47096113|ref|ZP_00233713.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|217964873|ref|YP_002350551.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|224500828|ref|ZP_03669177.1| metallo-beta-lactamase family protein [Listeria monocytogenes Finland 1988] gi|224502658|ref|ZP_03670965.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL R2-561] gi|226223645|ref|YP_002757752.1| hypothetical protein Lm4b_01047 [Listeria monocytogenes Clip81459] gi|254823700|ref|ZP_05228701.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|254827971|ref|ZP_05232658.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254832226|ref|ZP_05236881.1| hypothetical protein Lmon1_12809 [Listeria monocytogenes 10403S] gi|254852523|ref|ZP_05241871.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|254898799|ref|ZP_05258723.1| hypothetical protein LmonJ_03260 [Listeria monocytogenes J0161] gi|254911712|ref|ZP_05261724.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] gi|254931411|ref|ZP_05264770.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|254936038|ref|ZP_05267735.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|254993679|ref|ZP_05275869.1| hypothetical protein LmonocytoFSL_12288 [Listeria monocytogenes FSL J2-064] gi|255027198|ref|ZP_05299184.1| hypothetical protein LmonocytFSL_14233 [Listeria monocytogenes FSL J2-003] gi|255520593|ref|ZP_05387830.1| hypothetical protein LmonocFSL_05061 [Listeria monocytogenes FSL J1-175] gi|284801359|ref|YP_003413224.1| hypothetical protein LM5578_1109 [Listeria monocytogenes 08-5578] gi|284994501|ref|YP_003416269.1| hypothetical protein LM5923_1063 [Listeria monocytogenes 08-5923] gi|290893823|ref|ZP_06556802.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|300764237|ref|ZP_07074232.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|315281757|ref|ZP_07870317.1| ribonuclease J 1 [Listeria marthii FSL S4-120] gi|16410429|emb|CAC99105.1| lmo1027 [Listeria monocytogenes EGD-e] gi|16413485|emb|CAC96257.1| lin1026 [Listeria innocua Clip11262] gi|46880526|gb|AAT03825.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015462|gb|EAL06395.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|47018667|gb|EAL09419.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|217334143|gb|ACK39937.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|225876107|emb|CAS04813.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600354|gb|EEW13679.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258605831|gb|EEW18439.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|258608626|gb|EEW21234.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284056921|gb|ADB67862.1| hypothetical protein LM5578_1109 [Listeria monocytogenes 08-5578] gi|284059968|gb|ADB70907.1| hypothetical protein LM5923_1063 [Listeria monocytogenes 08-5923] gi|290556650|gb|EFD90185.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|293582961|gb|EFF94993.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|293589661|gb|EFF97995.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] gi|293592922|gb|EFG00683.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|300515227|gb|EFK42279.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|307570568|emb|CAR83747.1| Zn-dependent hydrolase [Listeria monocytogenes L99] gi|313614599|gb|EFR88183.1| ribonuclease J 1 [Listeria marthii FSL S4-120] gi|313619550|gb|EFR91221.1| ribonuclease J 1 [Listeria innocua FSL S4-378] gi|313624288|gb|EFR94335.1| ribonuclease J 1 [Listeria innocua FSL J1-023] gi|332311436|gb|EGJ24531.1| Metallo-beta-lactamase superfamily protein [Listeria monocytogenes str. Scott A] Length = 555 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 284/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 5 KNNETAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L L++P+YA A L+ K + ++ Sbjct: 61 VKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ D SI R HSIP+T +V+++P GNIVHTGD+K D + + + Sbjct: 121 EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA +SE+ + ++I +I ++ +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKI + G S++ + + +G I+ F+ P + ++ TG Sbjct: 240 QVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN ++ N L + G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H E A + G+ + N Sbjct: 360 VN-NIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMAN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + ++ DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNS 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + + + ++ I+ L+ Sbjct: 479 RVMAGPDIISRGF-IYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|206971203|ref|ZP_03232154.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218234509|ref|YP_002368778.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|228922728|ref|ZP_04086026.1| Ribonuclease J 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954253|ref|ZP_04116280.1| Ribonuclease J 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229047664|ref|ZP_04193250.1| Ribonuclease J 1 [Bacillus cereus AH676] gi|229071478|ref|ZP_04204699.1| Ribonuclease J 1 [Bacillus cereus F65185] gi|229081229|ref|ZP_04213738.1| Ribonuclease J 1 [Bacillus cereus Rock4-2] gi|229111448|ref|ZP_04240999.1| Ribonuclease J 1 [Bacillus cereus Rock1-15] gi|229129255|ref|ZP_04258227.1| Ribonuclease J 1 [Bacillus cereus BDRD-Cer4] gi|229146549|ref|ZP_04274919.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST24] gi|229152177|ref|ZP_04280370.1| Ribonuclease J 1 [Bacillus cereus m1550] gi|229180252|ref|ZP_04307596.1| Ribonuclease J 1 [Bacillus cereus 172560W] gi|229192185|ref|ZP_04319152.1| Ribonuclease J 1 [Bacillus cereus ATCC 10876] gi|296504470|ref|YP_003666170.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|206733975|gb|EDZ51146.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218162466|gb|ACK62458.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|228591296|gb|EEK49148.1| Ribonuclease J 1 [Bacillus cereus ATCC 10876] gi|228603461|gb|EEK60938.1| Ribonuclease J 1 [Bacillus cereus 172560W] gi|228631139|gb|EEK87775.1| Ribonuclease J 1 [Bacillus cereus m1550] gi|228636911|gb|EEK93371.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST24] gi|228654181|gb|EEL10047.1| Ribonuclease J 1 [Bacillus cereus BDRD-Cer4] gi|228671830|gb|EEL27123.1| Ribonuclease J 1 [Bacillus cereus Rock1-15] gi|228702091|gb|EEL54568.1| Ribonuclease J 1 [Bacillus cereus Rock4-2] gi|228711648|gb|EEL63602.1| Ribonuclease J 1 [Bacillus cereus F65185] gi|228723685|gb|EEL75044.1| Ribonuclease J 1 [Bacillus cereus AH676] gi|228805381|gb|EEM51973.1| Ribonuclease J 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836783|gb|EEM82126.1| Ribonuclease J 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325522|gb|ADH08450.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 555 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 159/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +A GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|206970858|ref|ZP_03231810.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH1134] gi|206734494|gb|EDZ51664.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH1134] Length = 557 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 288/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 61 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 121 IHSKSEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ Sbjct: 181 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 241 IVEACIKTNRKLALLGRSMVNVVEVALEEGYLHIPDGMLIEASEINRLDSKQVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 301 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 361 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 421 GDVVDISNEVAVQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + K L K + T+ +L + +L++ + AL Sbjct: 481 EIISGPDIISRGF-IYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKKEVREALGKF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYTNTKRKPMILPIIIEV 557 >gi|149181325|ref|ZP_01859822.1| hypothetical protein BSG1_06924 [Bacillus sp. SG-1] gi|148850888|gb|EDL65041.1| hypothetical protein BSG1_06924 [Bacillus sp. SG-1] Length = 549 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T+++K Sbjct: 1 DQTAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYLVK 56 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + +FITH HEDH G + L +++P+Y AIGLL+ K + + Sbjct: 57 NADKIKGLFITHGHEDHIGGIPYLLREINIPIYGGKLAIGLLKNKLEEHGLLRTAKLNII 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 Q D + ++ R HSIP++ +V+++P GN+VHTGD+K D + + + + Sbjct: 117 QEDDVIKFRKTAVSFFRTTHSIPDSYGVVVKTPPGNVVHTGDFKFDFTPVG-EPANLTKM 175 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+L L+ DSTN+ +SE+ + ++I DI + +G V+ TF+S++ R++ + Sbjct: 176 AEIGKEGVLCLLSDSTNSEVPNFTMSERKVGESINDIFRKVEGRVIFATFASNIYRLQQV 235 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A GRK+ + G S++ +++ D+G I+ F+ P ++ ++ TGSQ Sbjct: 236 IEAAVMHGRKVAVFGRSMENNIAIGQDLGYIQAPKGTFIDHGQINRLPANEVTILCTGSQ 295 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL++++ G R +++ DTVIFSS IPGN +++ N L G VI Sbjct: 296 GEPMAALSRIANGTHRQIQIHPGDTVIFSSSPIPGNTISVNRTINMLYRAGADVIHGSLN 355 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +H SGH + K M + I+P+ + IHGE H +LA+ G+ + NG+ Sbjct: 356 -DIHTSGHGSQEEQKLMLRLIKPKYFMPIHGEFRMQKMHTQLAVDCGVEPENCFIMDNGE 414 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L L D ++ ++ G DG IG ++ + RR LS G + V V ++ + + I Sbjct: 415 VLALGNDTAQVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMSDFKI 474 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + G + + + L + R ++ I+ L L Sbjct: 475 ASGPDIISRGF-VYMRESGDLINEAQTIISKHLSKLLERRTSQWSEIKNEITDTLAPFLY 533 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 534 EKTKRRPMILPIIMEV 549 >gi|229031610|ref|ZP_04187609.1| Ribonuclease J 1 [Bacillus cereus AH1271] gi|228729704|gb|EEL80685.1| Ribonuclease J 1 [Bacillus cereus AH1271] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 159/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTSQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + + + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITSHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|229019181|ref|ZP_04176014.1| Ribonuclease J 1 [Bacillus cereus AH1273] gi|229025426|ref|ZP_04181841.1| Ribonuclease J 1 [Bacillus cereus AH1272] gi|228735881|gb|EEL86461.1| Ribonuclease J 1 [Bacillus cereus AH1272] gi|228742121|gb|EEL92288.1| Ribonuclease J 1 [Bacillus cereus AH1273] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTSQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|42780804|ref|NP_978051.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|42736724|gb|AAS40659.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 557 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 179/562 (31%), Positives = 290/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK + + LGGV EIG NM + + ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNVSIVALGGVNEIGKNMYVIQF----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDNT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D GA + NHSIP+ + +V +P G IVHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNNVDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGARVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNQVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I+ G Y D + K L K + T+ ++ + + +L+ + A Sbjct: 477 KVDGEIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTSTKRKPMILPIIIEV 557 >gi|218899133|ref|YP_002447544.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228902483|ref|ZP_04066637.1| Ribonuclease J 1 [Bacillus thuringiensis IBL 4222] gi|228909803|ref|ZP_04073626.1| Ribonuclease J 1 [Bacillus thuringiensis IBL 200] gi|228967000|ref|ZP_04128038.1| Ribonuclease J 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|218541604|gb|ACK93998.1| RNA-metabolising metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228792734|gb|EEM40298.1| Ribonuclease J 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228850092|gb|EEM94923.1| Ribonuclease J 1 [Bacillus thuringiensis IBL 200] gi|228857227|gb|EEN01733.1| Ribonuclease J 1 [Bacillus thuringiensis IBL 4222] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 282/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVIEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +A GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|229162911|ref|ZP_04290868.1| Ribonuclease J 1 [Bacillus cereus R309803] gi|229174646|ref|ZP_04302174.1| Ribonuclease J 1 [Bacillus cereus MM3] gi|228608848|gb|EEK66142.1| Ribonuclease J 1 [Bacillus cereus MM3] gi|228620793|gb|EEK77662.1| Ribonuclease J 1 [Bacillus cereus R309803] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTAQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|152976391|ref|YP_001375908.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025143|gb|ABS22913.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 166/559 (29%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L ++VP+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGVFITHGHEDHIGGIPYLLRQVNVPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G IVHTGD+K D + + + Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSFGVVVKTPQGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + D+G I+ F+ P Q++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIQIGQDLGYIRCPKDTFVDAAQINKLPANQIVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H LA GI + Sbjct: 359 KLT-NIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMSLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEANIAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKIAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|315302510|ref|ZP_07873351.1| ribonuclease J 1 [Listeria ivanovii FSL F6-596] gi|313629128|gb|EFR97420.1| ribonuclease J 1 [Listeria ivanovii FSL F6-596] Length = 555 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 161/558 (28%), Positives = 284/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 5 KNNETAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L L++P+YA A L+ K + ++ Sbjct: 61 VKNKDKIKGLFITHGHEDHIGGVPYLLRELNIPIYAGKLASALIRNKLDEHGLLRQTKIY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ D SI R HSIP+T +V+++P GNIVHTGD+K D + + + Sbjct: 121 EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA +SE+ + ++I +I ++ +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKI + G S++ + + +G I+ F+ P + ++ TG Sbjct: 240 QVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN ++ N L + G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H + A + G+ + N Sbjct: 360 VN-NIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAQSAEECGVPEDNSFIMAN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + ++ DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALTSETAHVAGKIHASSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNS 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + + + ++ I+ L+ Sbjct: 479 RVMAGPDIISRGF-IYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|288556927|ref|YP_003428862.1| zinc-dependent hydrolase [Bacillus pseudofirmus OF4] gi|288548087|gb|ADC51970.1| zinc-dependent hydrolase [Bacillus pseudofirmus OF4] Length = 555 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 299/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E++ LGGVGEIG NM YG I++D G+ FP DD+ GVD+V PD++++ Sbjct: 5 QTEKVRVFALGGVGEIGKNM----YGIEVDDDIIVVDAGLMFPDDDMLGVDIVIPDVSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++++ + I +TH HEDH G L + ++VPVY + +GL+E K + ++ Sbjct: 61 VEQKDRVRGIILTHGHEDHIGGLSYVLKKINVPVYGTKLTLGLVEEKLKEAGIHRQTTLK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ VG+ ++ RVNHSIP+++ + + + G +VHTGD+K D + G D Sbjct: 121 LIDSNSRIKVGSTNVSFFRVNHSIPDSVGVCVETSQGAVVHTGDFKFDQTPVDGKQADIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + AIG++G+L LM DSTNA R GT SE + + I ++ ++ G ++VTTF+S+V RI+ Sbjct: 181 KMAAIGSKGVLCLMSDSTNAERPGTTKSETEVGQGIAEVFEHTDGRIIVTTFASNVHRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 +I A + RK+ ++G S+ RV+S+A +G + D L + + Y QL ++ TG Sbjct: 241 QVIHAAVKANRKLAVVGKSMVRVLSIASKLGYLEMPDNLLIEIDEVNKYKDHQLAILTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL ++++G R + + E DTVI ++ AIPGNE ++ I ++L G V+ Sbjct: 301 SQGEPMSALTRMAKGAHRQITITEHDTVIIAASAIPGNEQSVSGIIDKLHRIGADVVYGQ 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VH SGH +LK M ++P+ V +HGE AH+ LA++ G+ + V Sbjct: 361 T--KVHASGHGSQEELKLMLNLMKPKFFVPVHGEFRMQHAHRALAVEVGVKEEHIYLVDK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+++ +V G L DG +G ++ + RR LS G L V V L+ Sbjct: 419 GEVIEFTKGQARRGGKVPSGNVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKKTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P I+ G Y + K+ + + V + + L+ ++ L Sbjct: 479 EIVSGPNIISRGF-VYVRESEKLLEDSNELVSNILKKCVTENVNEWSSLKSNVREGLSRY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LFEQTKRRPMILPIIMEV 555 >gi|228990814|ref|ZP_04150779.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] gi|228769340|gb|EEM17938.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] Length = 557 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 283/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGGV EIG NM Y S ++IDCG FP + L G+DL+ PD T++ Sbjct: 5 ENALSIFALGGVNEIGKNMYAIQY----SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L L+VP+YA+ IGL+ K + Sbjct: 61 ENKDKIRGLVVTHGHEDHIGGIPYLLKQLNVPIYATKLTIGLIGIKLKEHGLQNLTQLFV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G+ S+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDSESVIEFGSISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ G+LAL+ +STNA R G SE+ + + I + A+ V+V+TF+S+V+R++ Sbjct: 181 MAKIGSGGVLALLSESTNAERPGFTPSERSVGERIEEAFIKARRKVIVSTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 VVDAAIKTNRKLALLGRSMVNVVSVALEQGYLNIPEGMLIEANEINQMDPERVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++L+ G R V + +DTVI ++ IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLASGNYRQVDILSEDTVILAATPIPGNERNVSRIIDNLFLLGANVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESVGVKKENIYVISN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQVAWKSRRIPAGNIYVDGLGIGDVGNAILRDRKQLSEDGMLVIVITLSKTEG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y D + + + + V+TT+ +L + +L++ I L Sbjct: 481 KIISGPDMISRGF-VYVRDSEEFLQRINQLVVTTINNLQKENVSQWNVLKKEIREVLGQF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 VYSHTKRKPMILPIIIEV 557 >gi|150396128|ref|YP_001326595.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150027643|gb|ABR59760.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 555 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 319/554 (57%), Positives = 427/554 (77%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +NEELVFLPLGGVGEIGMN+ LYGYG P SR+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 QNEELVFLPLGGVGEIGMNLGLYGYGRPGSRQWIMVDCGVTFPGPDLPGVDLVLPDIAFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +ER+NL AI ITHAHEDHYGAL+DLW L+VPVYASPF G+LEAKR +E+ +IP Sbjct: 63 AEERRNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRAFEKSRSEIPIT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ GD+++VG FS+E+V VNHSIPE MAL+IR+ +G +VHTGDWK+D + LG +TD+ Sbjct: 123 IFKQGDRINVGPFSVEAVGVNHSIPEPMALIIRTQLGTVVHTGDWKIDLEPSLGPLTDEK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG EG+LAL+CDSTNA+REG SE+ + +++ I+ +A+G V +TTFSS+V RIR Sbjct: 183 RLRQIGEEGVLALICDSTNALREGVSPSERQVSESLSKIIADAEGRVGITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+ AE GR+++LLGSS+KRVV VA DVG+++ + FL+++ FG PR++++VI TGS Sbjct: 243 SVAQAAEAAGREVLLLGSSMKRVVDVARDVGLMEGLRPFLAEDEFGYIPRDKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+++R EMRNV + DT++FSSR IPGNE AI IKN L+EQG+ +I + + Sbjct: 303 QGEPRAALAKIARDEMRNVAFSAGDTIVFSSRTIPGNEKAINDIKNGLIEQGIHIITD-S 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP N+L++MYQW++PQ++V +HGE HL AH ELALQ GI VP +RNG+M Sbjct: 362 EALVHVSGHPRRNELQQMYQWVKPQIVVPVHGEAAHLTAHAELALQSGIPSVPRLRNGEM 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E++D+ HG KDG LIG F ++GI +RR+LSF GH+SV+V+LDN Y+ G Sbjct: 422 LRLAPGPAEVVDQAPHGRIYKDGTLIGDFEEMGIGERRKLSFAGHVSVSVVLDNRYDFLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+P YD +G + L V+ V +P+ +RKDL +L+E++ A+RS +V Sbjct: 482 DPDVVPIGLPEYDDEGESMEDTLYDAVLGAVESIPRAKRKDLAMLQEAVRRAVRSTANQV 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ K+ Sbjct: 542 WGKKPVVTVFVTKV 555 >gi|327441216|dbj|BAK17581.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Solibacillus silvestris StLB046] Length = 555 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 169/558 (30%), Positives = 285/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + I+ID G+ FP+DDL G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDDLLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH G + L +++PVY A+GLL K + + I Sbjct: 61 VRNVDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLALGLLRNKLEEHGLLRTTKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ D + ++ R HSIP+ +VI++P GNIVHTGD+K D + + + Sbjct: 121 EFKENDVIKFRKTAVSFFRTTHSIPDAYGIVIKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+L L+ DSTNA + +SE+ + K+I +I + G ++ TF+S++ R++ Sbjct: 180 KMAEIGRDGVLCLLSDSTNAEKPDFTMSERTVGKSIDEIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 D A + GRK+ + G S+ +++ ++G I + F+ +S P +++++ TG Sbjct: 240 QATDAAVKYGRKVAVFGRSMDNAITIGRELGYITAPKETFVDIQSLNRLPANEVMILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS +PGN +++ I N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPVPGNTMSVNKIINLLFRAGAEVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA + + N Sbjct: 360 LN-NIHTSGHGSQQEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEACEVPLENSFVMEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + + G DG IG ++ + RR LS G + V V +D Sbjct: 419 GDVLALSANEAHVAGRIPSGDVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSVDMAKN 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + K + + Q + L+ I+ L Sbjct: 479 KIVSGPDIISRGF-VYMRESGMMINEAQKMLNHHLNSTIQEKDTQWNDLKNEITDVLGPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|225574865|ref|ZP_03783475.1| hypothetical protein RUMHYD_02943 [Blautia hydrogenotrophica DSM 10507] gi|225037939|gb|EEG48185.1| hypothetical protein RUMHYD_02943 [Blautia hydrogenotrophica DSM 10507] Length = 614 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 185/555 (33%), Positives = 302/555 (54%), Gaps = 14/555 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +PLGG+ +IGMN+ + Y +++DCG+SFP+DD+ G+DLV PDIT++ Sbjct: 68 KLKIIPLGGLEQIGMNITAFEY----EESIVVVDCGLSFPEDDMLGIDLVIPDITYLKDN 123 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + ITH HEDH GAL + ++VP+Y++ +GL+ K + K Sbjct: 124 ISKVKGFVITHGHEDHIGALPYVLKEVNVPIYSTKLTLGLITNKLKEHNLVKSTKLKEVC 183 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +++G FSIE V+ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 184 HGQVINLGHFSIEFVKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQRFA 243 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSI 243 IG +G+LALMCDSTNA R G +SE+ + ++ K +++ TF+S+V R++ I Sbjct: 244 EIGKKGVLALMCDSTNAERRGFTMSERTVGHVFDNLFNEYKDTRIIIATFASNVDRVQQI 303 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A + GRK+ + G S+ V++ A ++G +K D+ + + YP +Q+++I TGSQ Sbjct: 304 INSAYKFGRKVAVEGRSMVNVITTATELGYLKIPDKTLVEIDQIKNYPDDQVVLITTGSQ 363 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL++++ + V + DT+IFSS IPGNE A+ + N L ++G VI + Sbjct: 364 GESMAALSRMAASIHKKVTIKPNDTIIFSSNPIPGNEKAVSKVINELSQKGANVIFQ--- 420 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 HVSGH ++K +Y + P + +HGE HL A ++A GI + + +G Sbjct: 421 -DAHVSGHACQEEIKLIYSLVHPHYAIPVHGEYRHLKAQAQIAESLGISKDNIFILESGN 479 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L L D ++ +V G L DG +G ++ + R+ L+ G + V + L+ H N + Sbjct: 480 VLELDMDSAKVTGKVQTGAILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVMTLERHSNVV 539 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + K V + + + R D ++ + AL L Sbjct: 540 LAGPDIVSRGF-VYVRESEDLMGDARKVVEEALDNCLEHRVSDWSKIKNEVKDALGDFLW 598 Query: 540 KVWGKKPLVTVFINK 554 K ++P++ I + Sbjct: 599 KRTKRRPMILPIIME 613 >gi|229002771|ref|ZP_04160673.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] gi|229008525|ref|ZP_04165953.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228752749|gb|EEM02349.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228758486|gb|EEM07631.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] Length = 556 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MKNEEL---VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK +E+ LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKEIDSVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G+IV+TGD+K D I Sbjct: 117 VDLKTIDSNSAVEFNTTTVSFFGTTHSIPDSVGVCFHTSQGSIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + NA+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYNAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + D + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPDGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ + +HGE AH LA G+ + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFIPVHGEFRMQKAHAYLAEDVGVLKENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ + + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFEGEEAKQAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V T V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRTIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|228992487|ref|ZP_04152414.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] gi|228767121|gb|EEM15757.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] Length = 556 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MKNEEL---VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK +E+ LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKEIDSVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSAVEFNTTTVSFFGTTHSIPDSVGVCFHTSQGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + NA+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYNAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + D + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPDGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ + +HGE AH LA G+ + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFIPVHGEFRMQKAHAYLAEDVGVLKENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ + + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFEGEEAKQAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V T V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRTIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|302385316|ref|YP_003821138.1| RNA-metabolising metallo-beta-lactamase [Clostridium saccharolyticum WM1] gi|302195944|gb|ADL03515.1| RNA-metabolising metallo-beta-lactamase [Clostridium saccharolyticum WM1] Length = 555 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 181/559 (32%), Positives = 295/559 (52%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ++ +PLGG+ +IGMN+ + I++DCG++FP DD+ G+DLV PD++++ Sbjct: 6 SNAKVKIIPLGGMEQIGMNITAFE----CEDSIIIVDCGLAFPTDDMLGIDLVIPDVSYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GAL + ++VPVY + I L+E K + K Sbjct: 62 KQNIDKVKGFLITHGHEDHIGALPYILKDINVPVYGTKLTIALIENKLKEHNLLKNTKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G V++G F IE ++ NHSI + AL I SP G I+HTGD+K+D + G+ D + Sbjct: 122 VIKHGQSVNLGCFRIEFIKTNHSIADASALAIFSPAGVILHTGDFKIDYTPVFGEPADLE 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRI 240 +G +G+LALMCDSTNA R G SE+ + K +I + K ++V TF+S+V R+ Sbjct: 182 RFAELGKKGVLALMCDSTNATRAGFTPSERTVGKTFDNIFADHKNNRIIVATFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + GRK+V+ G S+ V+ A ++G I D + + YP EQ ++I T Sbjct: 242 QQVINSAAKYGRKVVVEGRSMVNVIGTASELGYINIPDGTLIDIDQLKNYPDEQTVLITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + + + D VI SS IPGNE A+ + N L +G VI++ Sbjct: 302 GSQGESMAALSRMASSTHKKISIKPSDVVILSSHPIPGNEKAVSKVINELSMKGAEVISD 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K MY +RP+ + +HGE H++A + L GI V + Sbjct: 362 ----DTHVSGHACQEEIKLMYALVRPKYAIPVHGEYRHIMAQRNLVQAMGIPKENVIIMS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G ++ + + + +D V G L DG +G ++ + R+ L+ G + V + L+ Sbjct: 418 SGDVVEVGQESWKTVDHVQAGGILVDGLGVGDVGNIVLRDRQNLAQNGIIVVVLTLEKYS 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + V V D D ++ I L Sbjct: 478 NQLLAGPDIVSRGF-VYVRESEDLMEEARNIVNDAVTDCLDRHVNDWGKIKNVIRDTLSD 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 537 FLWKRMKRNPMILPIIMEV 555 >gi|229086349|ref|ZP_04218526.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] gi|228696961|gb|EEL49769.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] Length = 556 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK N+ + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENDSVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + +V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSEVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + D + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPDGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ + +HGE AH LA G+ + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFIPVHGEFRMQKAHAYLAEDVGVLKENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ + + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFEGEEAKSAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V T V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRTIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|300854406|ref|YP_003779390.1| putative metal-dependent hydrolase [Clostridium ljungdahlii DSM 13528] gi|300434521|gb|ADK14288.1| predicted metal-dependent hydrolase [Clostridium ljungdahlii DSM 13528] Length = 555 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 308/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + + +PLGG+GEIG N+ + Y I+IDCG+SFP D+ G+D+V PDIT++ Sbjct: 4 EKDRVKVIPLGGLGEIGKNLTVIEY----KNDIIVIDCGMSFPDADMLGIDIVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + IF+TH HEDH GAL + ++VPVY + +G++E+K ++ + Sbjct: 60 KKNIDRVRGIFLTHGHEDHIGALPYVLKEINVPVYGTKLTLGIVESKLREHNLNDVVKLK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D + + + S+E +R +HSI ++ AL I +P+G I HTGD+K+D I G V D Sbjct: 120 CVKAKDVIKLDSMSVEFIRTSHSIADSTALAIHTPIGIIFHTGDFKVDYTPIDGSVIDFA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G +G++ ++ DSTN R G +SE+ + AK ++V TF+S++ RI+ Sbjct: 180 RLAELGKKGVILMLADSTNVERPGYTMSERTVGTTFQKFFSLAKSRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I AE+ RK+ + G S++ ++ VA+++G I K ++ ++ YP ++++I TG Sbjct: 240 QVITAAEKYDRKVAISGRSMENIMEVAMNLGYIDIKKNTLINIDNINRYPGNRIVIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ E + V + DT+I S+ IPGNE + + N+L ++G VI E Sbjct: 300 SQGEPMSALSRMAASEHKKVNIIPGDTIIISANPIPGNEKLVSGVINQLFKKGAEVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH +LK ++ ++P+ + +HGE HL HK+LA+ + N Sbjct: 360 L-ADVHVSGHACQEELKLIHTLVKPKFFMPVHGEYRHLKQHKDLAVSLGMPSNNIIIADN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + D I+ VV G DG +G ++ + RR LS G L+V + ++ Sbjct: 419 GDVIEVSRDSIKKTGTVVSGQIFVDGLGVGDVGNIVLRDRRHLSQDGILTVVITIEKQTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + + + + V + + + + ++ ++ LRS Sbjct: 479 TVIAGPDIISRGF-VYVRESEDLMEEAKELVRGALNECEEKHITEWASIKSNVKEVLRSF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 538 LYEKTKRKPMILPIIMEI 555 >gi|194015121|ref|ZP_03053738.1| protein YkqC [Bacillus pumilus ATCC 7061] gi|194014147|gb|EDW23712.1| protein YkqC [Bacillus pumilus ATCC 7061] Length = 555 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLKQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ D + ++ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IYEEEDTIKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPEFTMSERRVGESIDDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + D+G IK + F+ P ++ ++ TG Sbjct: 240 QVIESAVANGRKVAVFGRSMESAIDIGQDLGYIKCPKNTFIEHNEINRLPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNNISVSRTINQLYRAGAEVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-NIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKTHIKLANDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D + ++ G DG IG ++ + RR LS G + V V +D + Sbjct: 419 GEVLALKGDEASVAGKIPSGNVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSMDMKEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLINDAQDLISKHLEKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTRRRPMILPIIMEV 555 >gi|319649759|ref|ZP_08003912.1| ribonuclease J 1 [Bacillus sp. 2_A_57_CT2] gi|317398513|gb|EFV79198.1| ribonuclease J 1 [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY A+GLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLREVNIPVYGGKLALGLLRNKLEEHGLLRQTTLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP++ +V+++P G +VHTGD+K D + + + Sbjct: 121 EIKEDDIIKFRKTSVTFFRTTHSIPDSYGIVVKTPPGQVVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + +I+DI + +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPEFTMSERRVGDSIHDIFRKVEGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GRKI + G S++ +++ ++G I+ F+ P Q+ ++ TG Sbjct: 240 QVTEAAVTNGRKIAVFGRSMEAAINIGQELGYIQAPKDTFIDAHQINRLPANQVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++ +RL G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTIDRLSRAGAEVIYGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA+ G+ + N Sbjct: 360 L-SDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHAKLAVDCGVDEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D ++ ++ G DG IG ++ + RR LS G + V V ++ + Sbjct: 419 GEVLALSEDSAQVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMKDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + R ++ I+ L Sbjct: 479 KIAAGPDLISRGF-VYMRESGDLINDAQALITKHLSKVMERRTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|313895658|ref|ZP_07829214.1| ribonuclease J 1 [Selenomonas sp. oral taxon 137 str. F0430] gi|312975784|gb|EFR41243.1| ribonuclease J 1 [Selenomonas sp. oral taxon 137 str. F0430] Length = 562 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 185/556 (33%), Positives = 306/556 (55%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+GEIG NM + I+ID G+ FP++D+ G+DLV PDIT++++ Sbjct: 14 QKVQIIPLGGLGEIGKNMTAIR----VDDEIIVIDSGLMFPEEDMLGIDLVIPDITYLIE 69 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AI +TH HEDH GAL + + VPVY + +G+LE + V Sbjct: 70 NKDMVKAIVLTHGHEDHIGALPYVMKQIPVPVYGTRLTLGILEGRLKENGVDSSNLHSVM 129 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 GD +++G FS+ +RVNHSIP+ + L I++PVG IVHTGD+KLD + G +TD Sbjct: 130 A-GDIINIGCFSVGFIRVNHSIPDAVGLSIKTPVGMIVHTGDFKLDYTPVDGQMTDFRRF 188 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GN+G+L L+ DSTNA REG SE+ + + N +G ++V +FSS+V RI+ + Sbjct: 189 SDLGNKGVLLLLADSTNAEREGHTPSERTVGAALDKSFHNVRGRIIVASFSSNVHRIQQV 248 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + R++ +LG S++ VV +++++G + + +S + + +Q++V+ TGSQ Sbjct: 249 IDTAVKYKRRVAVLGRSMENVVGISLELGYLTAPEGTIISIDEVNNFRPDQIVVVTTGSQ 308 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL+++S + R + + DTVI S+ IPGNE + + L++ G VI + Sbjct: 309 GEPMSALSRMSTSDHRKITIVPGDTVIISATPIPGNEKLVSKTVDNLMKLGANVIYGR-D 367 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH +LK M+ +RP+ + +HGE HLV H ELA + + NG+ Sbjct: 368 KGIHVSGHGSREELKLMHNLVRPKFFMPVHGEYHHLVQHAELARELGMPKENIFISENGQ 427 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + ++ V G+ + DG +G ++ + RRQLS G L + V +D N + Sbjct: 428 ILEFTKEKGQVAGRVQAGMVMVDGLGVGDVGNIVLRDRRQLSQDGILIIVVAMDRQSNRV 487 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + V + + ++ ++ AL L Sbjct: 488 VSGPDIVSRGF-VYVRESEALMDEARARVQQALDRCEDENVCEWSAIKSNVRDALSRYLF 546 Query: 540 KVWGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 547 DKTRRRPMILPIIIEV 562 >gi|157692130|ref|YP_001486592.1| metallo-beta lactamase superfamily hydrolase [Bacillus pumilus SAFR-032] gi|157680888|gb|ABV62032.1| possible metallo-beta lactamase superfamily hydrolase [Bacillus pumilus SAFR-032] Length = 555 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 169/558 (30%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLKQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ D + ++ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IFEEEDTIKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPEFTMSERRVGESIDDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + D+G IK + F+ P ++ ++ TG Sbjct: 240 QVIESAVANGRKVAVFGRSMESAIDIGQDLGYIKCPKNTFIEHNEINRLPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNNISVSRTINQLYRAGAEVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-NIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKTHIKLANDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D + ++ G DG IG ++ + RR LS G + V V +D + Sbjct: 419 GEVLALKGDEASVAGKIPSGNVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSMDMKEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLINDAQDLISKHLEKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTRRRPMILPIIMEV 555 >gi|289434295|ref|YP_003464167.1| hydrolase, metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170539|emb|CBH27079.1| hydrolase, metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313638485|gb|EFS03660.1| ribonuclease J 1 [Listeria seeligeri FSL S4-171] Length = 555 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 283/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 5 KNNETAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L L++P+YA A L+ K + ++ Sbjct: 61 VKNKDKIKGLFITHGHEDHIGGVPYLLRELNIPIYAGKLASALIRNKLEEHGLLRQTKIY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ D SI R HSIP+T +V+++P GNIVHTGD+K D + + + Sbjct: 121 EYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA +SE+ + ++I +I ++ +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKI + G S++ + + +G I+ F+ P + ++ TG Sbjct: 240 QVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN ++ N L + G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H A + G+ + N Sbjct: 360 VN-NIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAGSAEECGVPEENSFIMAN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + I ++ DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALTSETAHIAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNS 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + + + ++ I+ L+ Sbjct: 479 RVMAGPDIISRGF-IYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|229168718|ref|ZP_04296439.1| Ribonuclease J 1 [Bacillus cereus AH621] gi|228614730|gb|EEK71834.1| Ribonuclease J 1 [Bacillus cereus AH621] Length = 555 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 282/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTSQLNRLPANKVVMLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|167630379|ref|YP_001680878.1| hypothetical protein HM1_2334 [Heliobacterium modesticaldum Ice1] gi|167593119|gb|ABZ84867.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1] Length = 553 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 173/556 (31%), Positives = 294/556 (52%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+GEIG NM + +++ ++IDCG+ FP+D++ G+D+V PDIT++++ Sbjct: 5 DKVTIIPLGGLGEIGKNMTII----KVNQELLIIDCGIMFPEDEMLGIDVVIPDITYLLE 60 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + I +TH HEDH GAL + L VPVY + + L E + + + Sbjct: 61 NRDAIRGIILTHGHEDHIGALPYMLKELKVPVYGTRLTLALAETYLKEQNMQTAAIFHTV 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + + VGAF +E +RV HSIP+ +A+ I +P G IVHTGD+K D + + TD L Sbjct: 121 KPREIIRVGAFRVEFIRVCHSIPDAVAVAIHTPAGVIVHTGDFKFDQTPVDSEATDYFRL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G G+LAL+ DSTNA + G SEK + ++ + +KG ++VTTF+SS+ RI+ Sbjct: 181 AQLGESGVLALLSDSTNAEKPGFTPSEKAAYGKLEEVFRLSKGRIIVTTFASSLYRIQQT 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +A + RK+V++G S++ VV VA G ++ +E++ + P ++L+++ TG Sbjct: 241 FQVAARYRRKVVVVGKSMQEVVQVARANGYLEIPPGTLCDEENWNIIPHDKLVLLTTGHL 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL + + R DTVI S+ + G+E ++ + L + G V E + Sbjct: 301 GEPMSALLRGPWTDARLSNYQPGDTVIISASPVAGSEKSVHRTIDGLCKLGADVYHEASG 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 H+SGH +LK M IRP+ + I GE L+ H LA G+ + + NG+ Sbjct: 361 G--HISGHASQEELKMMINLIRPKYFIPIQGEYRMLIRHARLAGDVGLSADNIFVLENGQ 418 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 +L L P + V G L DG +G ++ + RRQLS G L V + + + Sbjct: 419 VLELTPKKGSLAARVAAGRVLVDGLGVGDVGNIVLRDRRQLSQDGILIVVITISKESGQV 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++V G Y + ++ + V + + R + ++ ++ L L Sbjct: 479 VAGPDMVSRGF-VYVREAEELMEEAKIKVRQALEKSGERRVTEWAAIKTNVRDVLSKFLY 537 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 538 EKTRRRPMILPIIMEV 553 >gi|163941717|ref|YP_001646601.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229013183|ref|ZP_04170327.1| Ribonuclease J 1 [Bacillus mycoides DSM 2048] gi|229061644|ref|ZP_04198983.1| Ribonuclease J 1 [Bacillus cereus AH603] gi|229134786|ref|ZP_04263594.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST196] gi|163863914|gb|ABY44973.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] gi|228648639|gb|EEL04666.1| Ribonuclease J 1 [Bacillus cereus BDRD-ST196] gi|228717651|gb|EEL69307.1| Ribonuclease J 1 [Bacillus cereus AH603] gi|228748133|gb|EEL97994.1| Ribonuclease J 1 [Bacillus mycoides DSM 2048] Length = 555 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 282/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDTAQLNRLPANKVVMLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|228952093|ref|ZP_04114188.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229078895|ref|ZP_04211447.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228704309|gb|EEL56743.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228807625|gb|EEM54149.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 564 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEINRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|229189794|ref|ZP_04316807.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228593708|gb|EEK51514.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] Length = 550 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 287/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D + Sbjct: 117 ESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNEVAVQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ +L + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREALGKFIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|268608656|ref|ZP_06142383.1| metallo-beta-lactamase superfamily hydrolase [Ruminococcus flavefaciens FD-1] Length = 609 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 175/559 (31%), Positives = 301/559 (53%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + +PLGG+ EIG NM ++ S ++DCG++FP D+PGVD+V PD T+ Sbjct: 56 IKKTPVRIIPLGGLNEIGKNMTVFE----CSNDMFILDCGLAFPDADMPGVDIVIPDFTY 111 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + I ITH HEDH G L L ++VPVYA+ IGL+E K + + K+ Sbjct: 112 VERNADKVRGIVITHGHEDHIGGLAYLLKKINVPVYATRLTIGLIEGKLKEQGLYGKVNL 171 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V +G ++E ++VNHSIP+++ + I +P G IVHTGD+K+D I G + D Sbjct: 172 NIVEPKKTVKMGCMAVEFIKVNHSIPDSVGMAIHTPAGVIVHTGDFKVDYSPIDGKIIDL 231 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 +G+ G+LALM DSTNA R G SE+ + ++ + + +G +++ TFSS++ R Sbjct: 232 ARFGELGSRGVLALMADSTNAERPGYTHSERTVGESFDKLFQKGEGKRIIIATFSSNIHR 291 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II+ AE+ GRK+ + G S+ V++ AI++G + + + E Y E++++I Sbjct: 292 VQQIINCAERYGRKVAVFGRSMINVINTAIELGYLDVPPGIIIDIEMMNRYESERIVLIT 351 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ + + V + D +I S+ IPGNE + + N L++ G V+ Sbjct: 352 TGSQGEPMSALTRMAMNDHKKVNITPMDFIIISATPIPGNEKFVTRVVNELMKSGAEVVY 411 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E VHVSGH +LK M +P+ + +HGE HL H +LALQ G+ V Sbjct: 412 EAM-YEVHVSGHACQEELKLMQSLTKPKFFIPVHGEYKHLKKHADLALQMGMPKENVIIA 470 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G ++ + ++++ +V G L DG +G + + R+ L+ G + + + ++ Sbjct: 471 EIGNVIETDGNTMKVVSQVPAGRVLVDGLGVGDVGSIVLRDRKHLAQDGLIIIVIGIERA 530 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + ++ + T+ + ++ L+ + AL Sbjct: 531 TNEIVAGPDIISRGF-VYVRESEELMVEARLLLTDTLNNCSASELREWNSLKGKMRDALS 589 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + P++ I + Sbjct: 590 DYIYQKTKRSPMILPIIME 608 >gi|228957990|ref|ZP_04119727.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801697|gb|EEM48577.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 564 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLYIPEGMLIEANEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|229195920|ref|ZP_04322674.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228587562|gb|EEK45626.1| Zn-dependent hydrolase [Bacillus cereus m1293] Length = 550 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 179/555 (32%), Positives = 289/555 (52%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PDIT++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I A Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIVIHA 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D+G+ + NHSIP+ + +V + GN+VHTGD+K D + D + Sbjct: 117 ESEIDLGSIKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNHLDSKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNEVAVQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ +L + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|218232605|ref|YP_002366395.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus B4264] gi|296502294|ref|YP_003663994.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|218160562|gb|ACK60554.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus B4264] gi|296323346|gb|ADH06274.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 557 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 288/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKALKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I+ G Y D + + L K + T+ +L + +L+ + A Sbjct: 477 KVDGEIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|23098863|ref|NP_692329.1| hypothetical protein OB1408 [Oceanobacillus iheyensis HTE831] gi|22777090|dbj|BAC13364.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 555 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 167/558 (29%), Positives = 289/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNTYAIQF----QDEIILIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + ITH HEDH G + L ++VP+YA P AIGL+ K + + I Sbjct: 61 VQNEDKIKGLIITHGHEDHIGGIPFLLREINVPIYAGPLAIGLIRNKLEEHGLLRNAKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + Q D + S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 TIQEDDIIKFRKTSVSFFRTTHSIPDSYGVVVKTPPGNIVHTGDFKFDFTPVG-EPANLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+L L+ DSTN+ G +SE+ + ++I+DI G ++ TF+S++ R++ Sbjct: 180 KMAEIGSEGVLCLLSDSTNSEVPGFTMSERVVGESIHDIFSRVDGRLIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A + RK+ + G S++ +++ +++G I+ F+ P ++ ++ TG Sbjct: 240 QVVEAAVKYNRKVAVFGRSMESAINIGLELGYIQAPKDTFIEGNQINRLPANEVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ G R ++L DTV+FSS IPGN V++ N+L G V+ Sbjct: 300 SQGETMAALSRIANGTHRQIQLIPGDTVVFSSSPIPGNTVSVSRTINKLYRAGADVVHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H SGH + K M + IRP+ + IHGE L H +L + + N Sbjct: 360 L-SNIHTSGHGSQEEQKLMLRLIRPKFFMPIHGEYRMLKEHVKLGELCDVEAENSFVMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D I ++ G DG IG ++ + RR LS G + V V ++ + + Sbjct: 419 GDVLALSKDHAAIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMSDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + + K V + + + + ++ I+ + Sbjct: 479 KIASGPDIISRGF-VYMRESEDLINQAQKLVSNHLEKVMERKTTQWSEIKNEITDTIAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 538 LYEKTKRRPMVLPIIMEI 555 >gi|218896644|ref|YP_002445055.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus G9842] gi|218545535|gb|ACK97929.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus G9842] Length = 557 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 61 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 121 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 181 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 241 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVALLCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 301 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 361 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 421 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 481 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGRY 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYTNTKRKPMILPIIIEV 557 >gi|30019760|ref|NP_831391.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29895305|gb|AAP08592.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 557 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 288/562 (51%), Gaps = 12/562 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKALKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVVISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I+ G Y D + + L K + T+ +L + +L+ + A Sbjct: 477 KVDGEIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 536 LGKYIYTNTKRKPMILPIIIEV 557 >gi|229149913|ref|ZP_04278141.1| Zn-dependent hydrolase [Bacillus cereus m1550] gi|228633594|gb|EEK90195.1| Zn-dependent hydrolase [Bacillus cereus m1550] Length = 564 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGVLIEANEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRTIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|52785428|ref|YP_091257.1| YkqC [Bacillus licheniformis ATCC 14580] gi|163119412|ref|YP_078844.2| essential RNase J1/J2, metallo-beta-lactamase superfamily protein YkqC [Bacillus licheniformis ATCC 14580] gi|319646169|ref|ZP_08000399.1| ribonuclease J 1 [Bacillus sp. BT1B_CT2] gi|52347930|gb|AAU40564.1| YkqC [Bacillus licheniformis ATCC 14580] gi|145902918|gb|AAU23206.2| essential RNase J1/J2, metallo-beta-lactamase superfamily protein YkqC [Bacillus licheniformis ATCC 14580] gi|317391919|gb|EFV72716.1| ribonuclease J 1 [Bacillus sp. BT1B_CT2] Length = 555 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 288/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNT----YGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEEKIKGLFITHGHEDHIGGIPYLLKQVNIPVYGGQLAIGLLRKKLEEHGLLRQTKLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIEEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPQGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I DI + +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPDFTMSERKVGESIDDIFRKVEGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + +G IK + F+ P ++ ++ TG Sbjct: 240 QVIEAAVANGRKVAVFGRSMESAIEIGQTLGYIKCPKNTFVEANEINRLPAGKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGADVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 VT-NIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + + ++ G DG IG ++ + RR LS G + V V ++ + Sbjct: 419 GEVLALTSEEASVAGKIPSGNVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + G + + + + + + + ++ I+ L Sbjct: 479 KVSAGPDLISRGF-VYMRESGDLINDAQELIAGHLKKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|229109168|ref|ZP_04238767.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|229144325|ref|ZP_04272731.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228639112|gb|EEK95536.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228674178|gb|EEL29423.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] Length = 564 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|229127039|ref|ZP_04256038.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|228656392|gb|EEL12231.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] Length = 564 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVVISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|229029387|ref|ZP_04185472.1| Zn-dependent hydrolase [Bacillus cereus AH1271] gi|228731947|gb|EEL82844.1| Zn-dependent hydrolase [Bacillus cereus AH1271] Length = 564 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 178/558 (31%), Positives = 287/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGGV EIG NM + S ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNVSIVALGGVNEIGKNMYVI----QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D GA + NHSIP+ + +V +P G IVHTGD+K D + D Sbjct: 128 IHSESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNNLEPKQAAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 428 GGVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y D + K L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDMISRGF-VYVRDSEEFLKELNKLAVITINNLKKENVNSWGILKREVREALGKF 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|296331518|ref|ZP_06873989.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674179|ref|YP_003865851.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii str. W23] gi|296151331|gb|EFG92209.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412423|gb|ADM37542.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii str. W23] Length = 555 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 164/558 (29%), Positives = 283/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNTYAVQF----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D V ++ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + +G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVLNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRLPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGP 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G++L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 419 GEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMEGF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|229043465|ref|ZP_04191175.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|228725843|gb|EEL77090.1| Zn-dependent hydrolase [Bacillus cereus AH676] Length = 564 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLVEANEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 367 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 368 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 428 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 488 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKY 546 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 547 IYTNTKRKPMILPIIIEV 564 >gi|210610060|ref|ZP_03288239.1| hypothetical protein CLONEX_00425 [Clostridium nexile DSM 1787] gi|210152671|gb|EEA83677.1| hypothetical protein CLONEX_00425 [Clostridium nexile DSM 1787] Length = 567 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 303/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PDIT++ Sbjct: 18 SNSKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPDITYL 73 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + ITH HEDH G+L + +++P+YA+ +G++E K + + Sbjct: 74 RDNIKKVKGFVITHGHEDHIGSLPYVLKDMNLPIYATKLTMGIIENKLKEHNLLRSTRRK 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE +R NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 134 VVRHGQSINLGQFRIEFIRTNHSIQDAAALAIYSPAGTVVHTGDFKVDYTPVFGDAIDLQ 193 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 IG +G+LA+M DSTNA R G +SE+ + K I + +++ TF+S+V R+ Sbjct: 194 RFAEIGKKGVLAMMSDSTNAERPGFTMSERTVGKTFDQIFAEHRNTRIIIATFASNVDRV 253 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + RK+V+ G S+ ++S A ++G + D+ + + YP E+ ++I T Sbjct: 254 QQIINSAYKYDRKVVVEGRSMVNIISTASELGYLHIPDKTLIEIDQLKNYPDEKTVLITT 313 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + DTVIFSS IPGNE A+ + N L ++G VI + Sbjct: 314 GSQGESMAALSRMAADIHKKVTIKPGDTVIFSSNPIPGNEKAVSRVINELSQKGADVIFQ 373 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y ++P+ + +HGE HL A+ +LA GI + + Sbjct: 374 ----DAHVSGHACQEELKLIYSLLKPKYAIPVHGEYRHLKANAKLAESLGIPKENIFIMH 429 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G +L L +I+D+V G L DG +G ++ + R+ L+ G L V + L+ Sbjct: 430 SGDVLALDEKEAKIVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTLEKRT 489 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N + P+IV G Y + + + + + + R D ++ I + Sbjct: 490 NQLLAGPDIVSRGF-VYVRESESLMEEARQVLQEALEKCLTNRNADWSRIKLVIRDTMNE 548 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K +KP++ I + Sbjct: 549 FIWKRTKRKPMILPIIMDV 567 >gi|332654447|ref|ZP_08420190.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] gi|332516411|gb|EGJ46017.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] Length = 552 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 177/556 (31%), Positives = 306/556 (55%), Gaps = 10/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+L + LGG+ EIG N+ +Y YG I++DCG+ FP DD+ G+D+V PD+++++K Sbjct: 3 EKLKIISLGGLNEIGKNLTVYEYG----NDIIVVDCGMGFPDDDMYGIDVVIPDVSYLIK 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IFITH HEDH GAL + ++ P+YA+ + GL++ K R+ K I+ Sbjct: 59 NQSKIRGIFITHGHEDHIGALPYVLRSVNAPIYATRMSAGLIKLKLEEHRLLSKTKLITC 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +AG+ + G FS+E + VNHSI + +A IR P+G VHTGD+K+D I G + D L Sbjct: 119 EAGNVIQAGKFSVEFIHVNHSIADAVAFAIRCPLGVCVHTGDFKIDATPIQGGMIDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GNEG+LAL+ DSTN R G +E+ + + + + + ++VTTF+S+V RI+ I Sbjct: 179 GQLGNEGVLALLADSTNVERPGFTRTERSVGASFDALFRGCEERIIVTTFASNVDRIQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID+A + GRK+ + G S++ ++ V+ ++G + D + + P+ ++ +I TGSQ Sbjct: 239 IDVASRYGRKVAVTGRSMENIMKVSTELGYMNIPDGVLMDLNHIKSLPKNKVCIITTGSQ 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE SAL++++ R V + D +I S+ AIPGNE +IG++ N L +G V+ E Sbjct: 299 GETMSALSRMAFSTHRQVDIQPGDRIIISASAIPGNENSIGNVINELYRKGAEVLNERER 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH +LK ++ ++P+ + +HGE L H +LA + G+ V G+ Sbjct: 359 A-LHVSGHACQEELKIIHALVKPKYFIPVHGEQRMLQIHAKLACEVGMDPRNVIISDIGR 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 ++ ++ V G DG +G + + RR L+ G + V + + Sbjct: 418 VIEFTAKGCKLAGTVTAGKVFVDGSGVGDVGSVVLRDRRHLAEDGMVVVVAAMSGEDGAL 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + + + L + + +++ + D ++++I L + L Sbjct: 478 VSGPDIITRGF-VYVKESEGLMEELRQVALDSILSVDIRYATDWSAIKQTIKGDLSNYLY 536 Query: 540 KVWGKKPLVTVFINKI 555 K + P++ I ++ Sbjct: 537 KKTKRSPMILPVIMEV 552 >gi|294792575|ref|ZP_06757722.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] gi|294456474|gb|EFG24837.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] Length = 562 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 12 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L + PVYA+ GL+E K +VS K Sbjct: 68 IENKDRVKAVVITHGHEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCL-R 126 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G ++ ++ NHSIP++ A+ +P+G ++HTGD+K+D + G + D Sbjct: 127 TIAAGDEVQIGQVTVGFIQTNHSIPDSCAVYFNTPIGTVLHTGDFKIDQTPVDGRLMDMH 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LAL+ DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 187 KFAELGNKGVLALLSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 246 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 247 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 306 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 307 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGK 366 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 367 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 425 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 426 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 485 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 486 TIVAGPDLVSRGF-VYVRDAEELMLAAERRVEQVLEDCEMQRIKDWTTIKQNVRDALGKF 544 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 545 FYDKTRRRPMILPIIQDV 562 >gi|160880426|ref|YP_001559394.1| beta-lactamase domain-containing protein [Clostridium phytofermentans ISDg] gi|160429092|gb|ABX42655.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg] Length = 618 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 188/555 (33%), Positives = 300/555 (54%), Gaps = 14/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+G+IGMN+ + Y I++DCG++FP+D++ G+DLV PDIT++ Sbjct: 73 VKIIPLGGLGQIGMNITAFEY----QDSIIVVDCGLAFPEDEMLGIDLVIPDITYLKDNI 128 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G+L + ++VP+Y + +G++E K + K + Sbjct: 129 QKVKGFVITHGHEDHIGSLPYVIKDINVPIYGTKLTLGIIENKLKEHNLLKSTKRKVIKY 188 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +++G F IE +R NHSI + AL I SP G IVHTGD+K+D + G+ D Sbjct: 189 GQSINLGCFRIEFIRTNHSIADAAALAIYSPAGIIVHTGDFKVDYTPVFGETIDLQKFGE 248 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRSII 244 +G +G+LALMCDSTN MR G +SE+ + K +I +N+K ++V TF+S+V R++ II Sbjct: 249 LGKKGVLALMCDSTNVMRPGYTMSERTVGKTFDNIFAENSKHRIIVATFASNVDRVQQII 308 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A + RK+V+ G S+ +++ A ++G I D + + E Y EQL++I TGSQG Sbjct: 309 NSAVKYNRKVVIEGRSMVNIMTTASELGYITVPDNVLIDIEQMKNYTDEQLVLITTGSQG 368 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ R V + DTVIFSS IPGNE + I N L +G +VI + Sbjct: 369 ESMAALSRMAASIHRKVSITPGDTVIFSSTPIPGNEKNVSKIINELSMKGAKVIFQ---- 424 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 HVSGH ++K +Y +P+ + +HGE HL H ELA G+ V + +G + Sbjct: 425 DTHVSGHACQEEIKLIYALTKPKFAIPVHGEFRHLKCHAELAQDMGVKKDNVVLLTSGDV 484 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L L D +I+D + L DG +G ++ + R+ LS G + V V L+ + Sbjct: 485 LSLSEDRAKIVDHIPAQGILVDGLGVGDVGNIVLRDRQHLSENGLIIVVVTLEKFSNQVL 544 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + + + V + D ++ I +L L K Sbjct: 545 SGPDIVSRGF-VYVRESENLMEEARTVVNDALDKCLNKNMTDWGKIKNEIKDSLSDYLWK 603 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 604 KMKRNPMILPIIMEV 618 >gi|228992715|ref|ZP_04152641.1| Ribonuclease J 1 [Bacillus pseudomycoides DSM 12442] gi|228998759|ref|ZP_04158345.1| Ribonuclease J 1 [Bacillus mycoides Rock3-17] gi|229006275|ref|ZP_04163959.1| Ribonuclease J 1 [Bacillus mycoides Rock1-4] gi|228754921|gb|EEM04282.1| Ribonuclease J 1 [Bacillus mycoides Rock1-4] gi|228760934|gb|EEM09894.1| Ribonuclease J 1 [Bacillus mycoides Rock3-17] gi|228767047|gb|EEM15684.1| Ribonuclease J 1 [Bacillus pseudomycoides DSM 12442] Length = 555 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 162/559 (28%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G IVHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQIVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGHNLGYIRCPKDTFIEASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEFRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEANVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|16078517|ref|NP_389336.1| ribonuclease J1 [Bacillus subtilis subsp. subtilis str. 168] gi|221309322|ref|ZP_03591169.1| hypothetical protein Bsubs1_08056 [Bacillus subtilis subsp. subtilis str. 168] gi|221313649|ref|ZP_03595454.1| hypothetical protein BsubsN3_07992 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318571|ref|ZP_03599865.1| hypothetical protein BsubsJ_07926 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322845|ref|ZP_03604139.1| hypothetical protein BsubsS_08037 [Bacillus subtilis subsp. subtilis str. SMY] gi|321315211|ref|YP_004207498.1| ribonuclease J1 [Bacillus subtilis BSn5] gi|2833392|sp|Q45493|RNJ1_BACSU RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|2633824|emb|CAB13326.1| ribonuclease J1 [Bacillus subtilis subsp. subtilis str. 168] gi|3282138|gb|AAC24928.1| unknown [Bacillus subtilis] gi|320021485|gb|ADV96471.1| ribonuclease J1 [Bacillus subtilis BSn5] Length = 555 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 286/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNTYAVQF----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D V ++ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A Q GRK+ + G S++ + + +G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVQNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRMPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGP 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D + ++ G DG IG ++ + RR LS G + V V +D + + Sbjct: 419 GEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|15615225|ref|NP_243528.1| hypothetical protein BH2662 [Bacillus halodurans C-125] gi|10175283|dbj|BAB06381.1| BH2662 [Bacillus halodurans C-125] Length = 555 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 167/559 (29%), Positives = 291/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN + LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 4 LKNNQTAVYALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + +FITH HEDH G + L +++P+Y A+GLL K + +K Sbjct: 60 LVKNENKIKGLFITHGHEDHIGGIPYLLREVNIPIYGGKLALGLLRGKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 120 HDIQEDDIIKFAKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I I + +G ++ TF+S++ R+ Sbjct: 179 TKMAKIGEEGVLCLLSDSTNSEIPEFTMSERKVGESIDHIFRRVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ A + GRK+ + G S++ +++ ++G IK F+ P +++++ T Sbjct: 239 QQAVESAVRYGRKVAVFGRSMESAINIGQELGYIKAPKNTFIEPNQLNKLPDNEVMILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN +++ N+L + G VI Sbjct: 299 GSQGEPMAALSRVAFGTHRQIQIIPGDTVIFSSSPIPGNTLSVSKTINQLYKAGANVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE L H +LA G+ + Sbjct: 359 SLN-DIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMLKMHTKLAEDCGVPAENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L PD I ++ G DG IG ++ + RR LS G + V V L+ Sbjct: 418 NGDVLALHPDEAGIAGKIPSGSVYVDGNGIGDIGNIVLRDRRILSEEGLVVVVVSLNMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 Y + P+++ G Y + G + + + + + ++ + + ++ I+ L Sbjct: 478 YKVTAGPDLISRGF-VYMRESGDLIQEAQRLLANHLQEVMERKTNQWSEIKNEITDVLGP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L +KP++ I ++ Sbjct: 537 FLYDRTKRKPMILPIIMEV 555 >gi|294794363|ref|ZP_06759499.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] gi|294454693|gb|EFG23066.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] Length = 562 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIG NM ++ Y + I++D G++FP +D+ GVD+V PD+++I Sbjct: 12 NKGKFQIIPLGGLGEIGKNMTIFQY----EDEIIVLDSGLAFPSEDMLGVDIVIPDMSYI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G+L L + PVYA+ GL+E K +VS K Sbjct: 68 IENKDRVKAVVITHGHEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCL-R 126 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + AGD+V +G ++ ++ NHSIP++ A+ +P+G ++HTGD+K+D + G + D Sbjct: 127 TIAAGDEVQIGQVTVGFIQTNHSIPDSCAVYFNTPIGTVLHTGDFKIDQTPVDGRLMDMH 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LAL+ DSTN + GT SE + I + AKG V++ TF+S+VSRI+ Sbjct: 187 KFAELGNKGVLALLSDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQ 246 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 ID A RK+V++G S+ V +A + G + + D Y +Q++++ TG Sbjct: 247 QAIDAAVMFNRKVVVMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTG 306 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V+LA DTVI S+ IPGNE A+G + L+ G V+ Sbjct: 307 SQGEPMAGLSRMATSNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGK 366 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH +LK M +RP+ + +HGE L H EL + G+ V N Sbjct: 367 -DRGIHVSGHASQEELKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDN 425 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ D V G DG +G ++ I R+QL+ G + V + +D Sbjct: 426 GQIFEFDKDGGRKGGRVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASG 485 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y D ++ + V + D R KD +++++ AL Sbjct: 486 TIVAGPDLVSRGF-VYVRDAEELMLTAERRVEQVLEDCEMQRIKDWTTIKQNVRDALGKF 544 Query: 538 LKKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 545 FYDKTRRRPMILPIIQDV 562 >gi|299534591|ref|ZP_07047923.1| hypothetical protein BFZC1_01142 [Lysinibacillus fusiformis ZC1] gi|298729964|gb|EFI70507.1| hypothetical protein BFZC1_01142 [Lysinibacillus fusiformis ZC1] Length = 555 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 284/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+DDL G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH G + L +++PVY A+GLL K + + I Sbjct: 61 VRNVDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLALGLLRNKLEEHGLLRTTKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP+ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIKEEDVIKFRKTSVSFFRTTHSIPDAYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+L L+ DSTNA + +SE+ + K+I +I + ++ TF+S++ R++ Sbjct: 180 KMAEIGRDGVLCLLSDSTNAEKPNFTMSERTVGKSIDEIFRKVDSRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 D A + GRKI + G S+ +++ ++G I F+ +S P +++++ TG Sbjct: 240 QATDAAVKYGRKIAVFGRSMDNAITIGRELGYITAPKDTFIDAQSINRLPANEVMILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTVIFSS +PGN V++ I N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVIFSSSPVPGNTVSVNKIINLLFRAGAEVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H LA + + N Sbjct: 360 LN-NIHTSGHGSQEEQKLMLRLMKPKFFMPIHGEFRMLKMHTHLAEDCDVPLDNTFVMEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + + G DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALSANEAHVAGRIPSGDVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSVDMENQ 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + K + + + Q + L+ I+ L Sbjct: 479 KIVSGPDIISRGF-VYMRESGTMINEAQKMLNRHLNETIQSKTPQWTELKNEITDVLGPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LFEKTKRRPMILPIIMEV 555 >gi|291483995|dbj|BAI85070.1| hypothetical protein BSNT_02419 [Bacillus subtilis subsp. natto BEST195] Length = 555 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 286/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N + + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNTYAVQF----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D V ++ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A Q GRK+ + G S++ + + +G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVQNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRIPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGP 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D + ++ G DG IG ++ + RR LS G + V V +D + + Sbjct: 419 GEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|229086542|ref|ZP_04218714.1| Ribonuclease J 1 [Bacillus cereus Rock3-44] gi|228696859|gb|EEL49672.1| Ribonuclease J 1 [Bacillus cereus Rock3-44] Length = 555 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 163/559 (29%), Positives = 283/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQAAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G IVHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQIVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + D+G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGHDLGYIRCPKDTFIEASQINRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +LA GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEFRMQRMHMKLANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEANVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|229069265|ref|ZP_04202555.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|228713752|gb|EEL65637.1| Zn-dependent hydrolase [Bacillus cereus F65185] Length = 550 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 285/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIFALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D + Sbjct: 117 ESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEINRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + + G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + + L K + T+ +L + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|317129378|ref|YP_004095660.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] gi|315474326|gb|ADU30929.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] Length = 554 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 166/558 (29%), Positives = 289/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG NM YG + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 4 KNHQAAVFALGGLGEIGKNM----YGVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L +++P+Y A+ L+ K + + Sbjct: 60 VKNQDKIKGLFITHGHEDHIGGVPYLLREINIPIYGGKLALALIRNKLEEHGLMRGAQLR 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V S+ + HSIP++ +V+++P GNIVHTGD+K D + D + Sbjct: 120 EIHEDEIVKFQKTSVSFYKTTHSIPDSYGIVVKTPAGNIVHTGDFKFDFTPVG-DPANLT 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ G +SE+ + ++I I ++ +G ++ TF+S++ R++ Sbjct: 179 KMARIGEEGVLCLLSDSTNSEIPGFTMSERKVGESIDQIYRSVEGRIIFATFASNIYRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++ A + RKI + G S++ +++ +++G IK F+ P +Q+ ++ TG Sbjct: 239 QAVEAAVKYRRKIAVFGRSMESAINIGLELGYIKAPKSTFIDASQLNKLPADQVTILCTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++ I N+L G VI Sbjct: 299 SQGEPMAALSRIAHGTHRQIQIIPGDTVVFSSSPIPGNTLSVSKIINQLYRAGAEVIHGS 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + N Sbjct: 359 LN-DIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEFRMQKMHTKLAVDCGVPEENCFLMDN 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + ++ G DG IG ++ + RR LS G + V V L+ + Sbjct: 418 GDVLALDKSEGSLAGKIPSGSVYVDGNGIGDIGNIVLRDRRILSEEGLVVVVVSLNMKEF 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + +L + + ++ I+ L Sbjct: 478 KVSAGPDIISRGF-VYMRESGDLINEAQAKLAEHLNELMERKTTQWSEIKNEITDMLGPF 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 537 LYEKTKRKPMILPIIMEI 554 >gi|197303732|ref|ZP_03168769.1| hypothetical protein RUMLAC_02461 [Ruminococcus lactaris ATCC 29176] gi|197297252|gb|EDY31815.1| hypothetical protein RUMLAC_02461 [Ruminococcus lactaris ATCC 29176] Length = 556 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 178/560 (31%), Positives = 304/560 (54%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ +IGMN+ + Y +++DCG++FP+DD+ G+DLV PD+T++ Sbjct: 5 NNGKLRIIPLGGLEQIGMNITAFEY----EDSIVVVDCGLAFPEDDMLGIDLVIPDVTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ITH HEDH GAL + +++P+Y + +G++E K + + Sbjct: 61 KDNISKVKGFVITHGHEDHIGALPYVLKEINIPIYTTKLTMGIIENKLKEHNLLRSTRRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 121 VVRHGQSINLGKFRIEFIKTNHSIQDASALAIYSPAGVVVHTGDFKVDYTPVFGDAIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 IG +G+LALM DSTNA R+G SE+ + I + +++ TF+S+V R+ Sbjct: 181 RFAEIGKKGVLALMSDSTNAERKGFTQSERTVGITFDHIFAEHQNTRLIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+V+ G S+ ++S A ++G + + + + YP E++++I T Sbjct: 241 QQIINSAYKYGRKVVVEGRSMVNIISTASELGYLNVPENTLIEIDQMKNYPPEKMVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + DT+IFSS IPGNE ++ + N L +G VI + Sbjct: 301 GSQGESMAALSRMAADVHRKVTIQPNDTIIFSSNPIPGNEKSVSRVINELSAKGAEVIFQ 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI V ++ Sbjct: 361 ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGVATSLGIPKENVFIIQ 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G +L L + +++D+V G L DG +G ++ + R+ L+ G + V + L+ Sbjct: 417 SGDVLELCDESAKVVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGIIIVVLTLERRT 476 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N + P+IV G Y + ++ + K V + + + D ++ I A+ Sbjct: 477 NRLLAGPDIVSRGF-VYVRESEQLMEDARKAVADALDKCLRGKHTDWNKIKLVIRDAMND 535 Query: 537 LLKKVWGKKPLVTVFINKIS 556 + K ++P+V I + Sbjct: 536 YIWKKTKRRPMVIPIIMDVD 555 >gi|219669675|ref|YP_002460110.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219539935|gb|ACL21674.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 554 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ +PLGG+GEIG NM + Y + I+ID G++FP+D++ G+D+V PD +++ Sbjct: 3 KEHKVQIIPLGGLGEIGKNMTVIRY----DNQMIVIDAGLAFPEDEMLGIDIVIPDYSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH GAL L L P++A+ +GL+++K I Sbjct: 59 LEHKDMVQGILVTHGHEDHIGALPYLLKDLDAPIFATRLTLGLIQSKLKE-GNLDNIKAT 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V +G F +E + VNHSIP+ +AL I +P+G IVHTGD+K+D ++G+ D Sbjct: 118 VVRPRDTVKLGVFKVEFLSVNHSIPDAVALAIHTPLGTIVHTGDFKVDHTPVMGEKIDIH 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G++G+L LM DSTN R G +SE+ + + +AK +++ +F+++V R++ Sbjct: 178 KFAELGDKGVLCLMSDSTNVERPGFTMSERSVGHMFEEAFNSAKDRIIIASFATNVHRLQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A RK+ ++G S+ V++A ++G + + + + P Q ++ TG Sbjct: 238 QVITAAHHTNRKVAVVGRSMVNTVAIASELGYLDIPEDTLVDVDEVVNLPGNQACILTTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R +++ DTVI S+ IPGNE ++ + L + G VI E Sbjct: 298 SQGEPMSALTRMAMSDHRRIEIQPGDTVIISANPIPGNEKSVSKTIDLLFKLGANVIYES 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + +HVSGH +LK M IRPQ + +HGE L+ H +LA Q GI N Sbjct: 358 YQG-MHVSGHASQEELKLMLNMIRPQYFIPVHGEYRMLIKHAKLAEQMGISRENTFVADN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ I +V G L DG +G ++ + R+QLS G L V + + Sbjct: 417 GTIVEFTRHGASIAGKVPAGKVLIDGLGVGDVGNIVLRDRKQLSQDGILIVVMTISRSSG 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y + + + V T+ L + + +L+ + L Sbjct: 477 AIVAGPDVVTRGF-VYVRESESMLEEAKDKVRQTMNRLRENHVTEWAVLKGQVRETLSKH 535 Query: 538 LKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 536 FYEKTRRRPMILPIIQEV 553 >gi|317121874|ref|YP_004101877.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter marianensis DSM 12885] gi|315591854|gb|ADU51150.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter marianensis DSM 12885] Length = 589 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 306/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + +PLGG+GEIG NM + + + I+ID G++FP DD+PGVD+V PD ++ Sbjct: 38 KGSAVTIVPLGGLGEIGKNMMVLE----TEQDLIVIDAGLAFPGDDMPGVDVVIPDYGYL 93 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HEDH G + L + P+YA+ +GL+E K ++++ Sbjct: 94 IERKQKLRGIFLTHGHEDHIGGIPYLLKEIQAPIYATRLTLGLVERKLEEDKLALPPRSR 153 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G+++ G+F++E VNHSIP+++ IR+PVG +HTGD+K D I G V D Sbjct: 154 AVRPGERIRAGSFTVEPFLVNHSIPDSVGFAIRTPVGLFIHTGDFKFDQTPIDGRVADYQ 213 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L A G EG+ LM DSTNA R G SE+ + + + ++ + A+G +L+ +F+S + R++ Sbjct: 214 RLAAYGAEGVHVLMMDSTNAERPGVTGSERQVGEALANVFRQARGRILIASFASHLHRLQ 273 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATG 300 + D+A Q R++ ++G S++ V VAI +G ++ L+ G E+++V+ TG Sbjct: 274 QVFDLAAQFKRRLAVIGRSMENAVEVAIKLGYLRDTGGVLTPADKIGDLAPERVVVLMTG 333 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SALA+ + GE+R ++L DTV+ ++ IPGNE + + L +G +V+ Sbjct: 334 SQGEPLSALARAATGELRKLELIPGDTVVIAANPIPGNEKLVQRTIDNLFRRGCQVVYG- 392 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +L+ M RP+ + +HGE HL+ + ELA GI + N Sbjct: 393 PHAGVHVSGHGSREELRLMLNLTRPRFFIPVHGEYRHLLHNAELARSVGIPDNHILIGEN 452 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHY 477 G + + I +V G + DG +G ++ + RRQL+ G L V ++L Sbjct: 453 GTVFEITASSARIRGKVAAGAVMVDGLGVGDVGNVVLRDRRQLAQDGVLIVAMVLHREQR 512 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + + + + + + + + ++ ++ AL Sbjct: 513 KVVSGPDLITRGF-VYMRESEDLLAEARERAVQALNGIDEQDITEWSNIKAAVRDALGKF 571 Query: 538 LKKVWGKKPLVTVFINKI 555 L + G++P++ + ++ Sbjct: 572 LYERTGRRPVILPIVLEV 589 >gi|283796165|ref|ZP_06345318.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|291076384|gb|EFE13748.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] Length = 555 Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 187/559 (33%), Positives = 292/559 (52%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN ++ +PLGG+ +IGMNM + Y I++DCG++FP DD+ G+DLV PD+T++ Sbjct: 6 KNNKVKIIPLGGLEQIGMNMTAFEY----EDSIIVVDCGLAFPSDDMLGIDLVIPDVTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ITH HEDH GAL + + PVY + IGL+E K + + I Sbjct: 62 KNNIDKVKGFVITHGHEDHIGALPYVLKDVPAPVYGTKLTIGLIEHKLKEHNMLRTIKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F +E V+ NHSI + AL I +P G IVHTGD+K+D + G+ D Sbjct: 122 VVKHGQSINLGCFRVEFVKTNHSIVDASALAIFTPAGIIVHTGDFKIDYTPVFGEPADLQ 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +G +G+LALMCDSTNA+R G +SE+ + K I ++V TF+S+V R+ Sbjct: 182 RFAELGKKGVLALMCDSTNAIRPGFTMSERTVGKTFDAIFAEHQNNRIIVATFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II A + GRK+V+ G S+ V+ A ++G I + + E Y E ++I T Sbjct: 242 QQIISSACKYGRKVVIEGRSMVNVIGTASELGYIDIPEGTLIDIEHLKNYRPEDTVLITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + D VI SS IPGNE A+ + N L +G VI Sbjct: 302 GSQGESMAALSRMAANLHRKVSIMPGDVVILSSTPIPGNEKAVSRVINELSMKGAEVI-- 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K +Y +RP+ + +HGE HL+A K+LA GI V + Sbjct: 360 --NQDTHVSGHACQEEIKLIYSLVRPKFAIPVHGEYRHLMAQKKLAESMGIPKENVIIMS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G ++ + + + +D V G L DG IG ++ + R+ L+ G + V + L+ Sbjct: 418 SGDVIEIGEEGYKTVDHVQAGGILVDGLGIGDVGNIVLRDRQNLAQNGIIVVVLTLEKYS 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + V V D + D ++ I +L Sbjct: 478 NQLLAGPDIVSRGF-VYVRESEDLMDEAQAVVDAAVQDCLKRHVSDWGKIKNIIRDSLSD 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 537 FLWKRMKRNPMILPIIMEV 555 >gi|228996915|ref|ZP_04156548.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] gi|228762794|gb|EEM11708.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] Length = 557 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 282/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGGV EIG NM Y S ++IDCG FP + L G+DL+ PD T++ Sbjct: 5 ENALSIFALGGVNEIGKNMYAIQY----SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L L+VP+YA+ IGL+ K + Sbjct: 61 ENKDKIRGLVVTHGHEDHIGGIPYLLKQLNVPIYATKLTIGLIGIKLKEHGLQNLTQLFV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G+ S+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDSESVIEFGSISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ G+LAL+ +STNA R G SE+ + + I + A+ V+V+TF+S+V+R++ Sbjct: 181 MAKIGSGGVLALLSESTNAERPGFTPSERSVGERIEEAFIKARRKVIVSTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 VVDAAIKTNRKLALLGKSMVNVVSVALEQGYLNIPEGMLIEANEINQMDPERVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++L+ G R V + +DTVI ++ IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLASGNYRQVDILSEDTVILAATPIPGNERNVSRIIDNLFLLGAEVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESVGVKKEDIYVISN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQVAWKSRRIPAGNIYVDGLGIGDVGNAILRDRKQLSEDGMLVIVITLSKTEG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y D + + + V+TT+ +L + +L++ I L Sbjct: 481 KIISGPDMISRGF-VYVRDSEDFLQRINQLVVTTINNLQKENVSQWNVLKKEIKEVLGQF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 VYSHTKRKPMILPIIIEV 557 >gi|222056877|ref|YP_002539239.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221566166|gb|ACM22138.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 558 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 187/554 (33%), Positives = 300/554 (54%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+NMA++ YG +++DCG+ FP+ D+ G+D+V PDIT++++ Sbjct: 11 LKIIPLGGLGEIGLNMAVFEYG----DDIVIVDCGLMFPEPDMLGIDIVIPDITYLIERL 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + I +TH HEDH GAL + L+ P+Y + +G + K + K+ + Sbjct: 67 DKVRGILLTHGHEDHIGALPFVLRQLNPPIYGTALTLGFVREKLKEYELDNKVDLRVVRP 126 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D VD+G FS+E +RV HSI + L I +P G ++HTGD+KLD + G++TD + Sbjct: 127 RDVVDLGVFSVEFIRVAHSIVDGCGLAIGTPEGVVIHTGDFKLDQTPVDGELTDLATFSR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G G+LALM DSTN REG +SEK + +I V+V FSS++ R++ +++ Sbjct: 187 YGEAGVLALMADSTNVEREGYTLSEKLVGDAFDEIFPRCPQRVIVAAFSSNIHRVQQVVE 246 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRK++L G S+ V +A ++G ++ D L + + P+EQ+ +I TGSQGE Sbjct: 247 AAARCGRKVLLNGRSMIANVQIARELGYLRIPDDLLIDLKEMNRLPKEQICMITTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL +++ + + +KL E DTVI SSR IPGNE I + N L +G V E Sbjct: 307 PMSALTRIAMDDHKQIKLEEGDTVILSSRFIPGNEKTISDLINHLYRRGAEVYHEKV-SE 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 VHVSGH +LK + +RP+ + +HGE HLV H +LA + G+ NG ++ Sbjct: 366 VHVSGHASQEELKLLQNLVRPRYFIPVHGEYRHLVKHGQLAQRLGLPKERCILAVNGDVI 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFG 481 IID + G DG +G ++ + R+ LS G + V + ++ I Sbjct: 426 AFSNGEGCIIDRIETGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVIIGINQGSGEIIY 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G ++ + + K V+ T+ + R D ++ + LR K Sbjct: 486 GPDIVSRGF-VFEDESQEYLDEAKKVVVDTLALVNTEVRADWSEVKLEVRRVLRRFFNKT 544 Query: 542 WGKKPLVTVFINKI 555 ++P++ + ++ Sbjct: 545 IERRPVILPLVLEM 558 >gi|152976163|ref|YP_001375680.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024915|gb|ABS22685.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 583 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 174/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MKNEEL---VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK +E+ LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 28 MKRKEIDSVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 83 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 84 ITYLIENQERVKGLFITHGHEDHIGGIVYVMRKLSIPVYATKLTVGLIQEKLNEAGMLGR 143 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + +V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 144 VDLKTIDSNSEVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 203 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 204 ADLGKMAKIGNEGVLCLLSDSTNAERPGYTGSEKEVGMEISKVFYGAEGRIIVASFASNV 263 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + D + +S + +P +++ + Sbjct: 264 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPDGMLISLQEVENFPEKKVAI 323 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNEV++ I + L G V Sbjct: 324 LTTGSQGEPMAALSRMAKQSHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRAGAEV 383 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++PQ + +HGE AH LA GI + Sbjct: 384 VY-YGERKVHVSGHGSQEELKLMLNLMKPQYFIPVHGEFRMQKAHAYLAEDVGIARENIF 442 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D + +V G L DG +G ++ + R+ LS G L V V L Sbjct: 443 IVDKGDVIAFEGDEAKPAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 502 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V T V + + +L+++I Sbjct: 503 KEEKKIISGPEIISRGF-VYVRESEALIERSTDIVRTIVEQSIKEYSIEWSMLKQNIREL 561 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 562 LGQFLYEETKRKPMILPIIMEV 583 >gi|229004590|ref|ZP_04162328.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228756631|gb|EEM05938.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] Length = 557 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 283/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGGV EIG NM Y S ++IDCG FP + L G+DL+ PD T++ Sbjct: 5 ENALSIFALGGVNEIGKNMYAIQY----SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L L+VP+YA+ IGL+ K + Sbjct: 61 ENKDKIRGLVVTHGHEDHIGGIPYLLKQLNVPIYATKLTIGLIGIKLKEHGLQNLTQLFV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G+ S+ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDSESVIEFGSISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ G+LAL+ +STNA R G SE+ + + I + A+ V+V+TF+S+V+R++ Sbjct: 181 MAKIGSGGVLALLSESTNAERPGFTPSERSVGERIEEAFIKARRKVIVSTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 VVDAAIKTNRKLALLGKSMVNVVSVALEQGYLNIPEGMLIEANEINQMDPERVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 301 QGEPMAALSRLASGNYRQVDILSEDTVILAATPIPGNERNVSRIIDNLFLLGAKVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESVGVKKEDIYVISN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQVAWKSRRIPAGNIYVDGLGIGDVGNAILRDRKQLSEDGMLVIVITLSKTEG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y D + + + V+TT+ +L + +L++ I L Sbjct: 481 KIISGPDMISRGF-VYVRDSEDFLQRINQLVVTTINNLQKENVSQWNVLKKEIKEVLGQF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 VYSHTKRKPMILPIIIEV 557 >gi|89895243|ref|YP_518730.1| hypothetical protein DSY2497 [Desulfitobacterium hafniense Y51] gi|89334691|dbj|BAE84286.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 554 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ +PLGG+GEIG NM + Y + I+ID G++FP+D++ G+D+V PD +++ Sbjct: 3 KEHKVQIIPLGGLGEIGKNMTVIRY----DNQMIVIDAGLAFPEDEMLGIDIVIPDYSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH GAL L L P++A+ +GL+++K I Sbjct: 59 LEHKDMVQGILVTHGHEDHIGALPYLLKDLDAPIFATRLTLGLIQSKLKE-GNLDNIKAT 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V +G F +E + VNHSIP+ +AL I +P+G IVHTGD+K+D ++G+ D Sbjct: 118 VVRPRDTVKLGVFKVEFLSVNHSIPDAVALAIHTPLGTIVHTGDFKVDHTPVMGEKIDIH 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G++G+L LM DSTN R G +SE+ + + +AK +++ +F+++V R++ Sbjct: 178 KFAELGDKGVLCLMSDSTNVERPGFTMSERSVGHMFEEAFNSAKDRIIIASFATNVHRLQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A RK+ ++G S+ V++A ++G + + + + P Q ++ TG Sbjct: 238 QVITAAHHTNRKVAVVGRSMVNTVAIASELGYLDIPEDTLVDVDEVVNLPGNQACILTTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + R +++ DTVI S+ IPGNE ++ + L + G VI E Sbjct: 298 SQGEPMSALTRMAMSDHRRIEIQPGDTVIISANPIPGNEKSVSKTIDLLFKLGANVIYES 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + +HVSGH +LK M IRPQ + +HGE L+ H +LA Q GI N Sbjct: 358 YQG-MHVSGHASQEELKLMLNMIRPQYFIPVHGEYRMLIKHAKLAEQMGISRENTFVADN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ I +V G L DG +G ++ + R+QLS G L V + + Sbjct: 417 GTIIEFTRHGASIAGKVPAGKVLIDGLGVGDVGNIVLRDRKQLSQDGILIVVMTISRSSG 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y + + + V T+ L + + +L+ + L Sbjct: 477 AIVAGPDVVTRGF-VYVRESESMLEEAKDKVRQTMNRLRENHVTEWAVLKGQVRETLSKH 535 Query: 538 LKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 536 FYEKTRRRPMILPIIQEV 553 >gi|187778855|ref|ZP_02995328.1| hypothetical protein CLOSPO_02450 [Clostridium sporogenes ATCC 15579] gi|187772480|gb|EDU36282.1| hypothetical protein CLOSPO_02450 [Clostridium sporogenes ATCC 15579] Length = 567 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 183/552 (33%), Positives = 303/552 (54%), Gaps = 10/552 (1%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +PLGG+ EIG N+ + Y ++IDCG+ FP DD+ G+D+V PDIT++ K Sbjct: 22 IIPLGGLNEIGKNLTVIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINK 77 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + IF+TH HEDH GAL + ++VPVY + +G++E K + + + + Sbjct: 78 VKGIFLTHGHEDHIGALPYVLREVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIKPRE 137 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 138 IIRLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIG 197 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II A Sbjct: 198 KRGVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAA 257 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 E+ RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP Sbjct: 258 EKFKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPM 317 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 SAL++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +H Sbjct: 318 SALSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIH 376 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRL 424 VSGH +LK M+ +RP+ + +HGE HL H ELA Q G+ V G ++ + Sbjct: 377 VSGHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGLPENHVMVSDIGDVIEV 436 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVP 483 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P Sbjct: 437 SRECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGP 496 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +I+ G Y + + + V + + + + ++ +I LR L + Sbjct: 497 DIISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTK 555 Query: 544 KKPLVTVFINKI 555 +KP++ I +I Sbjct: 556 RKPMILPIIMEI 567 >gi|313888136|ref|ZP_07821810.1| ribonuclease J 1 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845826|gb|EFR33213.1| ribonuclease J 1 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 553 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 184/560 (32%), Positives = 309/560 (55%), Gaps = 12/560 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN ++ +PLGG+ EIG N+ L Y I+IDCG++FP+D++ G+D+V PD+T Sbjct: 1 MKNTNKVKIIPLGGLHEIGKNLTLVEY----RDDIIIIDCGMTFPEDEMLGIDVVIPDVT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + + +TH HEDH GA+ + L + +Y + IGLLE K R+S+ Sbjct: 57 YLENNKHRIRGLVLTHGHEDHIGAIPYVLRKLDLDIYGTGLTIGLLENKLKEHRLSRDKL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD V +G +E + VNHSIP+ AL I++P+G + H+GD+K+D I G+ + Sbjct: 117 HVVSA-GDVVKLGKMEVEWINVNHSIPDACALAIKTPLGYVYHSGDFKVDFTPISGEPIN 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSSSVS 238 + IG +G+LA++ +STN +REG +SE + + + ++ + +++ TF+S+V Sbjct: 176 LTRIAEIGQKGVLAMIGESTNVLREGYTMSESKVGETFNRLFQSLSDNRIIIATFASNVH 235 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ II+ AE+ GRK+VL G S+ V A +G + K F+ + Y +L++I Sbjct: 236 RVQQIINSAEKYGRKVVLSGRSMVNVTETARKLGQFRVKKDTFIDIKDMDKYDDSELVLI 295 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL +++ GE R ++L D +I S+ IPGNE A+ + NRL+E+G +VI Sbjct: 296 TTGSQGEPMSALTRIAYGEHRKIQLTPNDAIILSATPIPGNENAVTKVINRLLERGAKVI 355 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 E +HVSGH +LK + ++P+ + HGE HL+ H ++A Q G+ + Sbjct: 356 YETL-SEIHVSGHACQEELKLILSLVKPKYFIPAHGEVRHLMKHAKIAQQMGMDEENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG L + +++ +V G L DG +G ++ + RR LS G + V + L Sbjct: 415 MENGNCLEISQKSAKLVGDVPSGNILVDGLGVGDVGNIVLRDRRHLSEDGLIIVVISLTK 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+I+ G Y + + + V + D + +D L+ I LR Sbjct: 475 EGKVVSGPDIISRGF-VYVRESEDLIEDAKNVVRKILNDDSRDNLRDWNGLKSDIRDNLR 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S + K + P++ I ++ Sbjct: 534 SYIFKNTKRNPMILPIIMEV 553 >gi|229162733|ref|ZP_04290690.1| Zn-dependent hydrolase [Bacillus cereus R309803] gi|228620615|gb|EEK77484.1| Zn-dependent hydrolase [Bacillus cereus R309803] Length = 556 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + A V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDANSTVEFDTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLNVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|49478379|ref|YP_037858.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329935|gb|AAT60581.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 556 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGDDEASLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|153953954|ref|YP_001394719.1| metal-dependent hydrolase [Clostridium kluyveri DSM 555] gi|219854568|ref|YP_002471690.1| hypothetical protein CKR_1225 [Clostridium kluyveri NBRC 12016] gi|146346835|gb|EDK33371.1| Predicted metal-dependent hydrolase [Clostridium kluyveri DSM 555] gi|219568292|dbj|BAH06276.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 555 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 301/558 (53%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E++ +PLGG+GEIG N+ + + I+IDCG+ FP +++ G+D+V PDIT++ Sbjct: 4 EKEKVKIIPLGGLGEIGKNLTVIEF----KNDIIVIDCGLKFPDEEMLGIDVVIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + IF+TH HEDH GAL + ++VPVY S +G+++ K + + Sbjct: 60 KKNIDRVRGIFLTHGHEDHIGALPYVLKEINVPVYGSKLTLGIVQTKLKEHNLINSVDLK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D + + + +E +R +HSI ++MA+ I + G I+HTGD+K+D I G V D Sbjct: 120 HVKAKDVIKLDSMLVEFIRTSHSIADSMAIAIHTSAGIILHTGDFKVDYTPIDGSVIDLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+ ++CDSTN R G +SE+ + + +AK ++V TF+S++ RI+ Sbjct: 180 RFAELSKKGVTVMLCDSTNVERPGYTMSERTVGEAFEKFFASAKSRIIVATFASNIHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATG 300 +I AE+ RK+ + G S++ +V VA ++G + + + Y ++ +I TG Sbjct: 240 QVITAAEKYDRKVAVSGRSMENIVEVATELGYLDIKKNTIISIDNINKYNGNKIAIITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ E + V + DT+I S+ +IPGNE I + N+L ++G VI E Sbjct: 300 SQGEPMSALSRMAASEHKKVNIIPGDTIIISANSIPGNEKLISRVINQLFKKGADVIYEA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH +LK ++ ++P+ + +HGE HL H +LA+ G+ V N Sbjct: 360 L-ADVHVSGHACQEELKLIHTIVKPKFFIPVHGEYRHLKQHADLAVSLGLSPNNVVIADN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + D I VV G DG +G ++ + RR LS G L+V + ++ Sbjct: 419 GDIIEVSKDSIRKSGTVVSGQVFVDGLGVGDVGNIVLRDRRHLSQDGILTVVITMEKESG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + + + V + + + + ++ ++ LR Sbjct: 479 SVIAGPDIISRGF-VYVRESEDLMEEAKELVRNALNECEKKHITEWANIKSNVKEVLRLF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 538 LYERTKRKPMILPIIMEV 555 >gi|294498338|ref|YP_003562038.1| metallo-beta-lactamase domain-containing protein [Bacillus megaterium QM B1551] gi|294348275|gb|ADE68604.1| metallo-beta-lactamase domain protein [Bacillus megaterium QM B1551] Length = 557 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 181/559 (32%), Positives = 293/559 (52%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 L LGG+ EIG NM Y I+IDCG FP + L G+DL+ PDIT++ Sbjct: 4 NRNTLSIFALGGINEIGKNMYAVQY----DDDIIVIDCGSKFPDESLLGIDLIIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R+ + A+ +TH HEDH G + L L++P+YA+ +GL++ K ++S + I Sbjct: 60 QENREKVRALVVTHGHEDHIGGIPYLLKQLNLPIYATSLTLGLIDIKLQEHQLSAETELI 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ +G + + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 120 EINEESEITLGNIPLSFFKTNHSIPDCLGIVFHTPEGAVVHTGDFKFDLTPVNDQYPDLH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+LAL+ +STNA R G SEK + K++ + + AK V+++TF+S+V+R++ Sbjct: 180 KMAKIGSEGVLALISESTNAERPGFTPSEKLVGKHVEEAFRKAKRKVIISTFASNVNRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+D A + RK+ LLG S+ VVSVA++ G + + + + EQ+ ++ TG Sbjct: 240 QIVDAAIKTNRKLALLGRSMVNVVSVALEKGYLTIPEGMLIEPYEVHSLAPEQVAILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++L+ G R V++ +DTVI S+ IPGNE I I + L G VI Sbjct: 300 SQGEPMAALSRLASGNHRQVEILPEDTVILSAGPIPGNERNISRIVDSLFTLGAHVIYGS 359 Query: 361 AEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + Sbjct: 360 GSATGMHVSGHGYQEELKLMATLMKPKYFIPIHGEFRMLHHHSLLAESVGVEKENIFIIN 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ + ++ G DGF IG + + R+QLS G L + V L+ Sbjct: 420 NGDIVDIKGGTAVQTRKIPAGNVYVDGFGIGDVGNAILRDRKQLSEDGMLVIVVTLNKAE 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+ + G Y D ++ K + + V V L + ++++ I + L Sbjct: 480 GKIVSGPDTISRGF-VYTRDSEQLLKDVNRQVTKIVNQLQKTHVHQWSIMKKEIKTTLGQ 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 L ++P++ I ++ Sbjct: 539 FLYNQTKRRPMILPIIIEV 557 >gi|228984793|ref|ZP_04144965.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774991|gb|EEM23385.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 550 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 177/555 (31%), Positives = 288/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM + S ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYVI----QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D GA + NHSIP+ + +V +P G IVHTGD+K D + D + Sbjct: 117 ESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALISESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNRLDPSQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + I Sbjct: 417 VDINNQVAIQLRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ ++ + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 STKRKPMILPIIIEV 550 >gi|228966742|ref|ZP_04127786.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792841|gb|EEM40399.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFCDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229151997|ref|ZP_04280193.1| Zn-dependent hydrolase [Bacillus cereus m1550] gi|228631552|gb|EEK88185.1| Zn-dependent hydrolase [Bacillus cereus m1550] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFDDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|261367048|ref|ZP_05979931.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282571168|gb|EFB76703.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 662 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 178/555 (32%), Positives = 295/555 (53%), Gaps = 13/555 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 PLGG+GE+G N+ LY I++DCG+ FP D+ GVDLV PD T++++ + Sbjct: 114 ICPLGGLGEVGKNITLYE----CQGDMILVDCGLVFPDADMFGVDLVIPDFTYVLENKDK 169 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + +FITH HEDH G+L L +VP+YA+ IGL++ K ++ + Sbjct: 170 IKGLFITHGHEDHIGSLPYLLKKFNVPIYAARLTIGLIKNKLEEHGLASSAIFHEIRPRQ 229 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD-VTDKDSLCAI 186 KV +G F++E + VNHSIP+ +A I P G ++HTGD+K+D + GD VTD ++ Sbjct: 230 KVKLGCFTVEPIHVNHSIPDALAFAIECPAGIVIHTGDFKVDYTPLSGDAVTDLSTIAEY 289 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIID 245 G +G+LAL+ DSTNA R G +E+ + + + + A+ ++V TF+S++ R++ IID Sbjct: 290 GRKGVLALLADSTNAERPGFTATEQTVAEGVRRLFVRARNRRIIVATFASNIYRVQQIID 349 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A + GRK+ + G S+ +A ++G + D + + + YP E++++I TGSQGE Sbjct: 350 LAIESGRKVAVSGRSMVSNTEMARELGYLHAPDNVLIDIDEINKYPPEKVVLITTGSQGE 409 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL+++++ R VK+ D +I S+R IPGNE + + N L+ G VI E+ Sbjct: 410 PLSALSRMAQASHRQVKVGPNDFIIISARPIPGNEKTVTKVVNGLLSLGAEVIYENM-YD 468 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI---ACVPPVRNGKM 421 HVSGH + K M PQ + +HGE L H E A G + NG+ Sbjct: 469 THVSGHACQEEQKLMLTLAHPQYFLPVHGEFKQLKRHAETAEHLGYIPKQNIYIAENGQN 528 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 +RL D + + + V G + DG+ +G ++ + R LS G + V +D ++ + Sbjct: 529 IRLSVDGMTVENTVTAGAVMVDGYGVGDVGNVVLRDRHHLSEDGIIIVTAAVDGSNGQVL 588 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + ++ L V + D ++ + AL S + + Sbjct: 589 SGPDIVSRGF-VYVRESEELMDGLRTQVEMALDRSLSDNMHDWASVKARVREALSSYIYR 647 Query: 541 VWGKKPLVTVFINKI 555 + P++ + ++ Sbjct: 648 RTKRSPMILPILLEV 662 >gi|218234241|ref|YP_002368599.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218162198|gb|ACK62190.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLNVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|225375411|ref|ZP_03752632.1| hypothetical protein ROSEINA2194_01036 [Roseburia inulinivorans DSM 16841] gi|225212747|gb|EEG95101.1| hypothetical protein ROSEINA2194_01036 [Roseburia inulinivorans DSM 16841] Length = 664 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 182/558 (32%), Positives = 303/558 (54%), Gaps = 14/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + +L +PLGG+ +IGMN+ + Y I++DCG+SFP+DD+ G+DLV PDIT++ Sbjct: 116 SSKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLSFPEDDMYGIDLVIPDITYLK 171 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + FITH HEDH GA+ + ++ P+YA+ G++E K + K+ Sbjct: 172 DNIDKVKGFFITHGHEDHIGAIPYVLKEVNAPIYATKLTNGIIEHKLKEHNMLTKVKRKV 231 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G +++G F +E ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 232 VKYGQHINLGCFRVEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQR 291 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIR 241 IG +G+LALMCDSTNA R G +SEK + + I I + K +++ TF+S+V R++ Sbjct: 292 FGEIGKKGVLALMCDSTNAERPGFTMSEKTVGRTIDAIFDDNKNSRIIIATFASNVDRVQ 351 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A + GRK+++ G S+ ++ A ++G I D + E YP EQ ++I TG Sbjct: 352 QIINAAYKNGRKVIVEGRSMVNIIGTASELGYINIPDNTLIDIEQLKNYPDEQTVIITTG 411 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ G R V + DT++ SS IPGNE A+ +I N L +G +VI + Sbjct: 412 SQGESMAALSRMASGIHRKVTIKPNDTIVLSSNPIPGNEKAVSNIINELSMKGAKVIFQ- 470 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH ++K +Y +RP+ + +HGE HL+A +A + GI + + + Sbjct: 471 ---DVHVSGHACQEEIKLIYSLVRPKYAIPVHGEYRHLIAQARVAEELGIDKDNIFILSS 527 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + +V G + DG +G ++ + R+ L+ G + V + L+ Sbjct: 528 GDVLELDEESAAVTGKVHTGAIMVDGLGVGDVGNIVLRDRQHLAEDGIIIVVLTLEGGSG 587 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + + + D ++ I +L Sbjct: 588 QVLAGPDIVSRGF-VYVRGAETLMEEAKQVLDERMQYCMDKGITDWGKIKTEIKDSLSDF 646 Query: 538 LKKVWGKKPLVTVFINKI 555 + K ++P++ I ++ Sbjct: 647 VWKETKRRPMIMPIIMEV 664 >gi|229081052|ref|ZP_04213563.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228702256|gb|EEL54731.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNGG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229031428|ref|ZP_04187428.1| Zn-dependent hydrolase [Bacillus cereus AH1271] gi|228729717|gb|EEL80697.1| Zn-dependent hydrolase [Bacillus cereus AH1271] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIVSGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|206972632|ref|ZP_03233574.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228954074|ref|ZP_04116103.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229047483|ref|ZP_04193073.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|229071296|ref|ZP_04204519.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|229111269|ref|ZP_04240822.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|229129073|ref|ZP_04258046.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|229191922|ref|ZP_04318892.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|296504294|ref|YP_003665994.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|206732445|gb|EDZ49625.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228591473|gb|EEK49322.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228654310|gb|EEL10175.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|228672045|gb|EEL27336.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|228711750|gb|EEL63702.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|228723730|gb|EEL75085.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|228805640|gb|EEM52230.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296325346|gb|ADH08274.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|182419270|ref|ZP_02950523.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237667084|ref|ZP_04527068.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376910|gb|EDT74481.1| RNA-metabolising metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237655432|gb|EEP52988.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 591 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 180/557 (32%), Positives = 306/557 (54%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ +PLGG+GEIG NM + Y + I+IDCG++FP +DL G+D+V PDIT+++ Sbjct: 41 QKKIKIIPLGGLGEIGKNMTAFEY----KDEIIVIDCGLAFPDEDLYGIDMVIPDITYLV 96 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K + + I ITH HEDH GAL + ++VPVY + +GL+E K + K Sbjct: 97 KNKSKVKGILITHGHEDHIGALPYILKQINVPVYGTKLTLGLIETKLEDHEMLKDCTLTE 156 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + ++ F E +R NHSI ++ ++ + +P+G IVHTGD+K+D I +V D Sbjct: 157 VKPTEIIEFENFKAEFIRNNHSIADSCSIALHTPMGIIVHTGDFKIDFTPIDNEVIDLQR 216 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L +G +G+L LM DSTNA+ +G +SEK + + + ++ A G ++V+TF+S+V R++ Sbjct: 217 LAQLGKQGVLLLMADSTNALHKGYTMSEKTVGETLENLFGKASGRIIVSTFASNVHRLQQ 276 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I + A + RKI G S++++ VA +G + + + +S E YP +++ ++ TGS Sbjct: 277 ISNCALKYNRKIAFSGRSMEKISEVARRLGYLHIPEDMIISLEEINNYPNDRITIVTTGS 336 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE +AL +++ R V++ + D VI S+ IPGNE A+ ++ N L E+G VI + Sbjct: 337 QGESMAALTRIASSTHRYVQIEKGDMVIISASPIPGNEKAVSNVINDLTEKGANVIYKSI 396 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E +HVSGH +L+ M ++P+ + +HGE HL+ H +A G+ + + G Sbjct: 397 E-EIHVSGHACEQELRLMQALLKPKFFIPVHGEFKHLMTHGRIAESMGVNKDNIFMLEVG 455 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + L + +V G L DG IG ++ + R+ L+ G ++V V +D Sbjct: 456 DIFELTRKSGVVTGKVPSGRVLIDGMGIGDVGNMVLRDRKNLAEHGMITVVVAIDRRGKS 515 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y D + K + V +V + Q ++ SI + + + Sbjct: 516 IVCGPDIISRGF-VYVRDSEVLMKDIKDIVRESVYNCLQNNITQWAEIKNSIRREVDTFI 574 Query: 539 KKVWGKKPLVTVFINKI 555 K KKP++ I ++ Sbjct: 575 YKKMKKKPMILPVIVEL 591 >gi|229827982|ref|ZP_04454051.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM 14600] gi|229792576|gb|EEP28690.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM 14600] Length = 642 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 180/556 (32%), Positives = 298/556 (53%), Gaps = 14/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGG+G+IGMN+ + YG I++DCG++FP DD+ GVDLV PDIT++ + Sbjct: 96 TVKIIPLGGLGQIGMNITAFEYG----NDIIVVDCGLAFPDDDMYGVDLVIPDITYLKEN 151 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + FITH HEDH GA+ + + ++ P+YA+ + ++E K + + K+ + Sbjct: 152 ESKIRGFFITHGHEDHIGAIPYVLNEINAPIYATRLTMAIIEHKLEEKHMLSKVKRKVVK 211 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + G F +E ++ NHSI + AL I SP G IVHTGD+K+D + GD D Sbjct: 212 FGSTITAGQFKVEFIKTNHSIQDAAALAISSPAGTIVHTGDFKVDYTPVFGDPIDLQRFA 271 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRSI 243 +G +G+LAL+CDSTNA R G SEK + I I K +++ TF+S+V R++ I Sbjct: 272 ELGKKGVLALLCDSTNAERSGFTASEKTVGHTIDTIFAEHKTQRLIIATFASNVDRVQQI 331 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A + GRK+V+ G S+ ++ +A +G + D + YP ++ +I TGSQ Sbjct: 332 INSAYKYGRKVVVEGRSMVNIIGIASSLGYLDIPDNTLIDVNDIRNYPDNRICLITTGSQ 391 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL++++ G R V++ D V+FSS IPGNE ++ I N L+ +G + Sbjct: 392 GETMAALSRMANGIHRKVQITPNDVVVFSSHPIPGNEKSVSGIMNELIAKGAEI----VN 447 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH D+K +Y ++P V +HGE H +A LA G+ V ++ G Sbjct: 448 QDVHVSGHACAEDIKLIYSLVKPTYSVPVHGEIKHRMAQGRLAQAVGVPKDHVLMIQTGD 507 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 +L + D +++ +V G + DG +G ++ + R++L+ G + V + +D+ I Sbjct: 508 VLEINEDFHKVVGKVQTGAVMVDGLGVGDVGNIVLRDRQKLAEDGIIIVAMTMDSASGEI 567 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++V G Y + + + TV + D ++ I AL + + Sbjct: 568 VAGPDLVSRGF-VYVRGAEDLMEDARAVLNATVRKCEEDGISDWAEIKNQIKDALSAFVW 626 Query: 540 KVWGKKPLVTVFINKI 555 K + P++ I ++ Sbjct: 627 KQTQRSPMILPIIMEV 642 >gi|189426463|ref|YP_001953640.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422722|gb|ACD97120.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 593 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 197/558 (35%), Positives = 302/558 (54%), Gaps = 12/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N L + LGG+GEIG+N Y YG I++D G+ FP D+PGVD V PD +++ Sbjct: 44 SNSPLRIVALGGLGEIGINCMAYEYG----DDLILVDAGLMFPDADMPGVDYVIPDFSWL 99 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + L I +TH HEDH GAL L P+Y + +G+LE K + +V + + Sbjct: 100 RERADKLRGILLTHGHEDHIGALPFLLREFPAPIYGTALTLGILEGKLLEYKVEADLNPV 159 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D V +G+F +E +RV HS+ + AL IRSP G ++HTGD+KLD + G+VTD Sbjct: 160 --KPRDTVTLGSFQVEFIRVAHSVVDGCALAIRSPEGVVIHTGDFKLDQTPVDGEVTDLA 217 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G++G+LAL+ DSTN REG ISE+ + + + D+ KG ++V FSS++ R++ Sbjct: 218 TFARYGDQGVLALLSDSTNVEREGYTISERYVGEALSDLFPKCKGRIIVAAFSSNIHRVQ 277 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 + D+A GRK++L G S+ V +A +G +K D L + PREQ+ +I TG Sbjct: 278 QVADVAAASGRKVLLNGRSMIANVRIARQLGYLKISDDLLMDIRELPHIPREQVCMITTG 337 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ + + +KL + DTVI SSR IPGNE I + N L +G V E Sbjct: 338 SQGEPLSALSRIAMDDHKQIKLEKGDTVILSSRYIPGNERTISELINHLYRRGADVHHEK 397 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M RP+ + IHGE HLV H+ LA++ GI N Sbjct: 398 V-SEVHVSGHASQEELKLMMNITRPRFFLPIHGEYRHLVLHRRLAMKVGIPEERCLLAIN 456 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+++ + + I + V G DG +G ++ + RR LS G + V + ++ H Sbjct: 457 GEVVNFYNETACIEETVETGRVFVDGKGVGDVGEVVLKDRRHLSEDGMVLVILGVNQHTG 516 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 PEIV G ++ + + + V + +L D +R+ + L+ Sbjct: 517 EFIYGPEIVSRGF-VFEDESQAYLQTAREMVREALKELSVEFLADRDEVRQIVRQTLKRF 575 Query: 538 LKKVWGKKPLVTVFINKI 555 KK ++P+V I ++ Sbjct: 576 FKKSIERRPMVLPVILEM 593 >gi|228986941|ref|ZP_04147067.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157375|ref|ZP_04285453.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|229197908|ref|ZP_04324624.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228585626|gb|EEK43728.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228626102|gb|EEK82851.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|228772719|gb|EEM21159.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 556 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|30022065|ref|NP_833696.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29897622|gb|AAP10897.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 555 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 157/559 (28%), Positives = 282/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +F+ H HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFLPHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +A GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + ++ G DG IG ++ + RR LS G + V V +D Sbjct: 418 NGDVLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 478 FKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|218898896|ref|YP_002447307.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228902299|ref|ZP_04066458.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] gi|228922512|ref|ZP_04085813.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|218545233|gb|ACK97627.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228837107|gb|EEM82447.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228857336|gb|EEN01837.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] Length = 556 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229012980|ref|ZP_04170145.1| Zn-dependent hydrolase [Bacillus mycoides DSM 2048] gi|228748234|gb|EEL98094.1| Zn-dependent hydrolase [Bacillus mycoides DSM 2048] Length = 556 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ + ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + +++G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNEV++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRSGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA G+ + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGVARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|317501699|ref|ZP_07959890.1| metallo-beta-lactamase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088416|ref|ZP_08337331.1| hypothetical protein HMPREF1025_00914 [Lachnospiraceae bacterium 3_1_46FAA] gi|316896950|gb|EFV19030.1| metallo-beta-lactamase [Lachnospiraceae bacterium 8_1_57FAA] gi|330408183|gb|EGG87671.1| hypothetical protein HMPREF1025_00914 [Lachnospiraceae bacterium 3_1_46FAA] Length = 556 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 181/560 (32%), Positives = 302/560 (53%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ +IGMN+ + Y +++DCG++FP+DD+ G+DLV PD+T++ Sbjct: 5 NNGKLRIIPLGGLEQIGMNITAFEY----EDSIVVVDCGLAFPEDDMLGIDLVIPDVTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ITH HEDH GAL + +++P+Y + +G++E K + + Sbjct: 61 KDNASKVKGFVITHGHEDHIGALPYVLKEINLPIYTTKLTMGIIENKLKEHNLLRTTKRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G ++HTGD+K+D + GD D Sbjct: 121 VVRHGQSINLGKFRIEFIKTNHSIQDASALAIYSPAGVVIHTGDFKVDYTPVFGDAIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 IG +G+LALM DSTNA R G SEK + I + +++ TF+S+V R+ Sbjct: 181 RFAEIGKKGVLALMSDSTNAERRGFTQSEKTVGITFDHIFAEHQNTRLIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+V+ G S+ +++ A ++G + + + + YP E++++I T Sbjct: 241 QQIINSAYKYGRKVVVEGRSMVNIIATASELGYLDVPENTLIEIDQMKNYPPEKMVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + DT+IFSS IPGNE ++ + N L +G VI + Sbjct: 301 GSQGESMAALSRMAADVHRKVTIQPNDTIIFSSNPIPGNEKSVSRVINELSSKGAEVIFQ 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y ++P+ + +HGE HL A+ E+A GI V ++ Sbjct: 361 ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAEVAKSLGIPKENVFIIQ 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G +L L D E++D+V G L DG +G ++ + R+ L+ G + V + L+ Sbjct: 417 SGDVLELCDDSAEVVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGIIIVVLTLERRT 476 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N + P+IV G Y + ++ + V V R D ++ I ++ Sbjct: 477 NRLLAGPDIVSRGF-VYVRESEELMDDARRAVSEAVDKCLSGRHTDWNKIKLVIRDSMND 535 Query: 537 LLKKVWGKKPLVTVFINKIS 556 + K +KP+V I + Sbjct: 536 YIWKKTKRKPMVIPIIMDVD 555 >gi|312134548|ref|YP_004001886.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] gi|311774599|gb|ADQ04086.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] Length = 554 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 182/557 (32%), Positives = 317/557 (56%), Gaps = 9/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +++ +PLGG+ EIG NM + + + ++IDCG++FP+D++ G+DLV PDI+++ Sbjct: 4 KQDKIRIIPLGGLNEIGKNMLVVE----VNDEIVVIDCGLAFPEDEMLGIDLVIPDISYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 +K ++ + A+ +TH HEDH GA+ + L+VP+Y + +GL+E K + + + Sbjct: 60 VKNKERVKALILTHGHEDHIGAIPYVLRDLNVPIYGTKLTLGLVEIKLMEFGIDLNTVKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +AGD + +E +R HSI +++A+ I +P+G IVHTGD+K+D I G+ D Sbjct: 120 FTVKAGDVISFANMRVEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGEPIDL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+LAL+CDSTNA R G +SE+ + I A+G V+V TFSS + R+ Sbjct: 180 IRFAELGKQGVLALLCDSTNAERPGFTLSERTVGATFDRIFSQAQGRVIVATFSSHIHRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP ++++I T Sbjct: 240 QQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPLNRIVLITT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L QG +VI E Sbjct: 300 GSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFRQGAQVIYE 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D + +HVSGH ++K ++ RP+ + +HGE HL+ H +LA++ G V + NG Sbjct: 360 DID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLAMELGEKNVFVLENG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 K+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 419 KVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDSSTRD 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+I+ G Y + + + + + + + + ++ + LR+ L Sbjct: 479 VLSGPDIITRGF-IYIKESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNLRNFL 537 Query: 539 KKVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 538 FEKTRRNPMIIPIITEI 554 >gi|299822494|ref|ZP_07054380.1| metallo-beta-lactamase [Listeria grayi DSM 20601] gi|299816023|gb|EFI83261.1| metallo-beta-lactamase [Listeria grayi DSM 20601] Length = 555 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 163/558 (29%), Positives = 282/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD ++I Sbjct: 5 KNNETAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYI 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + +FITH HEDH G + L L++P+YA A L+ K + ++ Sbjct: 61 VKNKEKIKGLFITHGHEDHIGGVPYLLRELNIPIYAGKLASALIRNKLEEHGLLRQAKIY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ D S+ R HSIP+ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EFEEDDVFKFRKTSVSFFRTTHSIPDAYGVVVKTPSGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA +SE+ + ++I +I ++ +G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVPTFSLSERVVGESIKNIFRDVEGRIIFATFASNMYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKI + G S+ + + +G I+ F+ P + ++ TG Sbjct: 240 QVVEASIEAGRKIAVFGRSMDSAIEIGRQLGYIQAPKDTFIDTHQLNRLPAGNVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L + G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPNDTVVFSSSPIPGNTISVNRTINLLYQAGADVIHGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + M + ++P+ + IHGE H E A + G+ + N Sbjct: 360 VN-NIHASGHGGKQEQLLMLRLMKPKYFMPIHGEFRMQKIHSETAFETGVPLENSFVLGN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D ++ DG IG ++ + R LS G + V V +D + Sbjct: 419 GDVLALTADSARFAGKIHAASVYIDGSGIGDIGNIVLRDRHVLSEEGLVIVVVSIDMKNS 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + D+ + + ++ I+ L+ Sbjct: 479 KIMSGPDIISRGF-IYMRESGNLIGEAQSILKRHLKDVMEQQTSKWSEIKNEITDTLQPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|229174463|ref|ZP_04301995.1| Zn-dependent hydrolase [Bacillus cereus MM3] gi|228609023|gb|EEK66313.1| Zn-dependent hydrolase [Bacillus cereus MM3] Length = 556 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 173/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGADV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|226311865|ref|YP_002771759.1| hypothetical protein BBR47_22780 [Brevibacillus brevis NBRC 100599] gi|226094813|dbj|BAH43255.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 555 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 170/557 (30%), Positives = 279/557 (50%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 NE L LGGV EIG NM YG + ++IDCG FP + G+DL+ PDI++++ Sbjct: 5 NETLSIFALGGVYEIGKNMYGIQYG----DEIVLIDCGSKFPDESYLGIDLIIPDISYLL 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + A+ +TH HEDH G + L+VPVY + +GL+E K + + IS Sbjct: 61 ENQEKVRALIVTHGHEDHIGGIPYFLRQLNVPVYGTRLTLGLIELKLKEHNLLHQSTLIS 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G+ +I + NHSIP+ + +V + G IVHTGD+K D + D Sbjct: 121 IDRDSTISFGSLTISFFQTNHSIPDCLGVVFETKAGAIVHTGDFKFDLTPVHKQSPDLHR 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+LAL+ +STNA R G SEK + + + A + V+TF+S+V R++ Sbjct: 181 MAEIGQKGVLALLSESTNAERPGFTPSEKHVGDRLLEAFSKAHQKIFVSTFASNVYRLQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +ID E RK+ LLG S+ VV +A + G + + + + E G ++ ++ TGS Sbjct: 241 VIDAVEATNRKLALLGRSMVNVVRIASEQGYLHIPEGMLVEIEEVGELDPARVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++LS R+VK+ DTVI SS IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLSTSGYRHVKVERGDTVILSSSPIPGNERNVARIVDNLFIMGANVIYGSG 360 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH + +LK M ++PQ + IHGE L H++LA G+ + + NG Sbjct: 361 TG-MHVSGHGFQEELKLMLTLMKPQYFIPIHGEYRMLHQHRQLAESVGVDFESIFIINNG 419 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ + ++ G L DG IG + + R+ LS G L + V Sbjct: 420 DVVDIQDGVAVQERKIPAGNTLVDGLGIGDVGNGILRDRKHLSEDGILVIVVTRSKTDGK 479 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+++ G + + + + + + +L + L++ + ++ + Sbjct: 480 ILSGPDLISRGF-IHAPESEGLLEEATRLASEVITNLQEANVSQWNRLKQGMRESIGKFV 538 Query: 539 KKVWGKKPLVTVFINKI 555 ++P++ I + Sbjct: 539 YAKTKRRPMILPIIMDV 555 >gi|30263800|ref|NP_846177.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|42782883|ref|NP_980130.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|47778225|ref|YP_020574.2| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186647|ref|YP_029899.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|52141691|ref|YP_085138.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|65321125|ref|ZP_00394084.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacillus anthracis str. A2012] gi|118479017|ref|YP_896168.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|165872604|ref|ZP_02217235.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167635847|ref|ZP_02394156.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167639771|ref|ZP_02398040.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170687820|ref|ZP_02879034.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170706828|ref|ZP_02897286.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177652083|ref|ZP_02934629.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190568402|ref|ZP_03021309.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196038463|ref|ZP_03105772.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196044453|ref|ZP_03111688.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|206978197|ref|ZP_03239078.1| ribonuclease J 2 (RNase J2) [Bacillus cereus H3081.97] gi|217961218|ref|YP_002339786.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218904925|ref|YP_002452759.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225865777|ref|YP_002751155.1| ribonuclease J2 [Bacillus cereus 03BB102] gi|227813294|ref|YP_002813303.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228928847|ref|ZP_04091879.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935096|ref|ZP_04097924.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947518|ref|ZP_04109808.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092839|ref|ZP_04223973.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|229123311|ref|ZP_04252515.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|229601285|ref|YP_002868037.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254683495|ref|ZP_05147355.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254722016|ref|ZP_05183805.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254735836|ref|ZP_05193542.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254739638|ref|ZP_05197332.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755989|ref|ZP_05208020.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254759350|ref|ZP_05211375.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|30258444|gb|AAP27663.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|42738810|gb|AAS42738.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|47551930|gb|AAT33049.2| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180574|gb|AAT55950.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|51975160|gb|AAU16710.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|118418242|gb|ABK86661.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|164711636|gb|EDR17182.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167512172|gb|EDR87549.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167528804|gb|EDR91562.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170128246|gb|EDS97115.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170668136|gb|EDT18885.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172082452|gb|EDT67517.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190560406|gb|EDV14384.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196024488|gb|EDX63160.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196030871|gb|EDX69469.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|206743614|gb|EDZ55040.1| ribonuclease J 2 (RNase J2) [Bacillus cereus H3081.97] gi|217065243|gb|ACJ79493.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218539519|gb|ACK91917.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225787554|gb|ACO27771.1| ribonuclease J2 [Bacillus cereus 03BB102] gi|227003787|gb|ACP13530.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228660087|gb|EEL15723.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|228690461|gb|EEL44244.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|228812038|gb|EEM58369.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824566|gb|EEM70370.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830654|gb|EEM76259.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229265693|gb|ACQ47330.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|324327691|gb|ADY22951.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 556 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|297583893|ref|YP_003699673.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297142350|gb|ADH99107.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 163/560 (29%), Positives = 282/560 (50%), Gaps = 11/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN ++ LGG+GEIG NM + + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 4 KNHQVAIFSLGGLGEIGKNMYAVQF----QDEIIIIDSGIKFPEDELLGIDYVIPDYTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + IFITH HEDH G + L + P+Y A+ L+ K + + Sbjct: 60 VKNQDKIRGIFITHGHEDHIGGVPYLLREIKAPIYGGKLALALIRNKLEEHGLLRSASLH 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ R HSIP++ +V+++P GNIV TGD+K D + + + Sbjct: 120 EIEEDTVIKFQKTAVSFFRTTHSIPDSFGVVVKTPEGNIVQTGDFKFDFTPVG-EPANLA 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L LM DSTN+ G +SE+ + ++I I + G ++ TF+S++ R++ Sbjct: 179 KMAKIGEEGVLCLMSDSTNSEVPGFTMSERKVGESIDSIFRKVDGRIIFATFASNIYRLQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++ A + RK+ + G S++ + + ++G IK + F+ P +Q++++ TG Sbjct: 239 QAVEAAVKYKRKVAVFGRSMESAIRIGRELGYIKAPESTFIEPGQINRIPADQILILCTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTVIFSS IPGN ++ I N+L + G VI Sbjct: 299 SQGEPMAALSRIAHGTHRQIQIIPGDTVIFSSSPIPGNTKSVNKIINQLFKAGAEVIHGS 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA G+ + Sbjct: 359 LN-DIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKKHTELAADCGVPLEHSFVMDI 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + G DG IG ++ + RR LS G + V V ++ Sbjct: 418 GDVLAMDKKEASLAGRIPSGSIYVDGSGIGDIGNIVLRDRRILSEEGLVVVVVTINMKTS 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + L + + ++ IS L Sbjct: 478 KIVSGPDIISRGF-VYMRESGDLIHEGQRKLNAHLHGLMKNNKTQWNEIKNEISDTLGPF 536 Query: 538 LKKVWGKKPLVTVFINKISR 557 L + +KP++ I ++ + Sbjct: 537 LYERTKRKPMILPIIMEVDK 556 >gi|229146368|ref|ZP_04274739.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228637001|gb|EEK93460.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDIPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|295703687|ref|YP_003596762.1| metallo-beta-lactamase domain-containing protein [Bacillus megaterium DSM 319] gi|294801346|gb|ADF38412.1| metallo-beta-lactamase domain protein [Bacillus megaterium DSM 319] Length = 557 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 179/559 (32%), Positives = 293/559 (52%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 L LGG+ EIG NM Y I+IDCG FP + L G+DL+ PDIT++ Sbjct: 4 NRNTLSIFALGGINEIGKNMYAVQY----DDDIIVIDCGSKFPDESLLGIDLIIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R+ + A+ +TH HEDH G + L L++P+YA+ +GL++ K ++S + I Sbjct: 60 QENREKVRALVVTHGHEDHIGGIPYLLKQLNLPIYATSLTLGLIDIKLQEHQLSAETELI 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ +G + + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 120 EINEESEITLGNIPLSFFKTNHSIPDCLGIVFHTPEGAVVHTGDFKFDLTPVNDQYPDLH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+LAL+ +STNA R G SEK + K++ + + AK V+++TF+S+++R++ Sbjct: 180 KMAKIGSEGVLALISESTNAERPGFTPSEKLVGKHVEEAFRKAKRKVIISTFASNINRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+D A + RK+ LLG S+ VVSVA++ G + + + + EQ+ ++ TG Sbjct: 240 QIVDAAIKTNRKLALLGRSMVNVVSVALEKGYLTIPEGMLIEPYEVHSLAPEQVAILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++L+ G R V++ +DTVI S+ IPGNE I I + L G VI Sbjct: 300 SQGEPMAALSRLASGNHRQVEILPEDTVILSAGPIPGNERNISRIVDSLFTLGAHVIYGS 359 Query: 361 AEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + Sbjct: 360 GSATGMHVSGHGYQEELKLMATLMKPKYFIPIHGEFRMLHHHSLLAESVGVEKENIFIIN 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ + ++ G DGF IG + + R+QLS G L + + L+ Sbjct: 420 NGDIVDIKGGAAVQTRKIPAGNVYVDGFGIGDVGNAILRDRKQLSEDGMLVIVITLNKAE 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+ + G Y D ++ K + + V V L + ++++ I + L Sbjct: 480 GKIVSGPDTISRGF-VYTRDSEQLLKDVNRQVTKIVNQLQKAHVHQWSIMKKEIKTTLGQ 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 L ++P++ I ++ Sbjct: 539 FLYNQTKRRPMILPVIIEV 557 >gi|228960003|ref|ZP_04121668.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799746|gb|EEM46698.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 173/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|240145914|ref|ZP_04744515.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|257201979|gb|EEV00264.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|291535172|emb|CBL08284.1| conserved hypothetical protein [Roseburia intestinalis M50/1] gi|291539700|emb|CBL12811.1| conserved hypothetical protein [Roseburia intestinalis XB6B4] Length = 584 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 305/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+ +IGMN+ + Y I++DCG+SFP+DD+ G+DLV PD+T++ Sbjct: 35 KTSKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLSFPEDDMYGIDLVIPDVTYL 90 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + FITH HEDH GA+ + ++VP+YA+ IG++E K + K+ Sbjct: 91 KDNIDKVKGFFITHGHEDHIGAIPYVLRDINVPIYATKLTIGIIEHKLKEHNMLTKVKRK 150 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F +E +R NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 151 VVKYGQHINLGCFRVEFIRTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ 210 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 IG +G+LAL+CDSTNA R+G +SEK + K +I + K +++ TF+S+V R+ Sbjct: 211 RFGEIGKKGVLALLCDSTNAERKGFTMSEKTVGKTFDEIFADHKNTRIIIATFASNVDRV 270 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+V+ G S+ ++ +A ++G I D + E YP E+ ++I T Sbjct: 271 QQIINTAYKYGRKVVVEGRSMVNIIGIASELGYINIPDNTLIDIEELKNYPDEKTVMITT 330 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G + V + DT++ SS IPGNE A+ I N L +G VI + Sbjct: 331 GSQGESMAALSRMACGMHKKVTIKPNDTIVLSSNPIPGNEKAVSGIINELSMKGANVIFQ 390 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH ++K +Y ++P+ V +HGE HL+A +A + GI + + Sbjct: 391 ----DVHVSGHACQEEIKLIYSLVKPKYAVPVHGEYRHLLAQARVAEELGINKDNIFILT 446 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G +L L + E+ V G + DG +G ++ + R+ L+ G + V + L++ Sbjct: 447 SGDVLELDDEKAEVTGRVHVGDIMVDGLGVGDVGNIVLRDRQHLAEDGIIIVVLTLESGS 506 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + + D ++ I +L Sbjct: 507 GQVLAGPDIVSRGF-VYVRGAESLMEDAKHLLEDKMQYCMDKGITDWGKIKNEIKDSLGD 565 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K ++P++ I ++ Sbjct: 566 FVWKETKRRPMIMPIIMEV 584 >gi|228916435|ref|ZP_04080002.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229186035|ref|ZP_04313205.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228597454|gb|EEK55104.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228843238|gb|EEM88319.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|182701898|ref|ZP_02617301.2| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237795997|ref|YP_002863549.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182674227|gb|EDT86188.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229261531|gb|ACQ52564.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 569 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 183/550 (33%), Positives = 302/550 (54%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ EIG N+ + Y ++IDCG+ FP DD+ G+D+V PDIT++ K + Sbjct: 26 PLGGLNEIGKNLTVIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVK 81 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IF+TH HEDH GAL + ++VPVY + +G++E K + + + + + Sbjct: 82 GIFLTHGHEDHIGALPYVLREVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIKPREII 141 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 142 RLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIGKR 201 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II AE+ Sbjct: 202 GVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAAEK 261 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP SA Sbjct: 262 FKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPMSA 321 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +HVS Sbjct: 322 LSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIHVS 380 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH +LK M+ +RP+ + +HGE HL H ELA Q G+ V G ++ + Sbjct: 381 GHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGLPENHVMVSDIGDVIEVSR 440 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEI 485 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P+I Sbjct: 441 ECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGPDI 500 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V + + + + ++ +I LR L + +K Sbjct: 501 ISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTKRK 559 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 560 PMILPIIMEI 569 >gi|167767370|ref|ZP_02439423.1| hypothetical protein CLOSS21_01889 [Clostridium sp. SS2/1] gi|167711345|gb|EDS21924.1| hypothetical protein CLOSS21_01889 [Clostridium sp. SS2/1] Length = 603 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 302/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + +PLGG+G+IGMN+ + + + +++DCG++FP +D+ G+DLV PDIT++ Sbjct: 54 KPSSVKIIPLGGLGQIGMNITAFE----CNNQILIVDCGLAFPDEDMLGIDLVIPDITYL 109 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GA+ L+VP+YA+ + L+E K + + Sbjct: 110 KDNASKIRGLVITHGHEDHIGAIPYFEKELNVPIYATKLTMALIENKLKEHGILNNVERH 169 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GDKV +G F++E ++ NHSI + AL I +P G IVHTGD+K+D + G+ D Sbjct: 170 VVTHGDKVKLGIFNVEFIKTNHSIADAAALAITTPAGVIVHTGDFKIDHTPLFGEAIDLA 229 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +G++G+LALM DSTN R+G SEK + K + ++ KG +++ TF+S+V R+ Sbjct: 230 RFAELGSKGVLALMADSTNVERQGYTPSEKNVGKRLDNLFAEHLKGRMIIATFASNVDRV 289 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIAT 299 + II+ A + GRK+ + G S+ +++ A ++G IK + L + YP +Q+++I T Sbjct: 290 QHIINSAHKYGRKVAVEGRSMVNIIATASELGYIKIPKNTLIETDQIKNYPDDQIVLITT 349 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + DT+IFSS IPGNE I I N L +G +++ E Sbjct: 350 GSQGETMAALSRMANSTHRKVSIVPSDTIIFSSSPIPGNEKNISKIMNELALKGAQIVFE 409 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +L+ +Y +P+ + +HGE HL+ H+ELA++ GI + Sbjct: 410 ----DTHVSGHACREELRLIYALTKPKYAIPVHGEYRHLMRHRELAIEMGIPKENAFVLA 465 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L L +I +V G L DG +G ++ + R+ LS G + V L H Sbjct: 466 EGDVLELNKRQGKIAGKVQAGGILVDGLGVGDVGNIVLNDRKLLSQNGLIIATVTLQKHG 525 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N I P+IV G Y + + + V + + D ++ I L + Sbjct: 526 NMILAGPDIVSRGF-VYVRESESLMEGARDVARDAVEECLERNITDWARIKTKIKDELSN 584 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K + P++ I ++ Sbjct: 585 YIWKKTKRNPMILPIITEV 603 >gi|229178122|ref|ZP_04305493.1| Zn-dependent hydrolase [Bacillus cereus 172560W] gi|228605252|gb|EEK62702.1| Zn-dependent hydrolase [Bacillus cereus 172560W] Length = 550 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 286/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNNTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D + Sbjct: 117 ESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + + +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAERPGFTPSERSVGERVEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + + + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLHIPEGMLIEANEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + + G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + + L K + T+ +L + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 NTKRKPMILPIIIEV 550 >gi|196034203|ref|ZP_03101613.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|195993277|gb|EDX57235.1| metallo-beta-lactamase family protein [Bacillus cereus W] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGNDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|220931713|ref|YP_002508621.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219993023|gb|ACL69626.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 558 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 184/557 (33%), Positives = 303/557 (54%), Gaps = 11/557 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ +PLGGVGEIG NM L + ++ID GV FP+DDL G+DLV PD +++ + Sbjct: 8 NEVKMIPLGGVGEIGKNMMLVEMA----GEILIIDAGVMFPEDDLLGIDLVIPDFSYVKE 63 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + I +TH HEDH GAL L ++VPV+ + +GL+E K R++K Sbjct: 64 NANRVKGIVLTHGHEDHIGALPYLLKEINVPVFGTKLTLGLVEGKLKEHRINKGRKLKVV 123 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G ++VG+F ++ + VNHSI +T AL I +P+G I++ D+K D I G+V D L Sbjct: 124 NPGSSINVGSFKVDFILVNHSIADTCALAIHTPLGPIIYASDFKFDQTPIDGEVADFHKL 183 Query: 184 CAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G+ G+LAL DSTN REG +SEK + I DI + A+ ++V TF+S++ R++ Sbjct: 184 AELGDNYPGVLALFADSTNVEREGYTLSEKVVGGTIDDIFRKARNRIVVATFASNIHRVQ 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 I+D A + RKI G S+ + +A ++G + + + + + P ++++++ TG Sbjct: 244 QIVDAAFKYNRKIAFTGRSMINNIEIARELGYLIIPEDMIVDIRNISNLPDDKIVLLTTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++RG+ ++ + + DTV+ S+ AIPGNE +G N+L ++G VI ED Sbjct: 304 SQGEPMAALTRMARGDHYHINIKDGDTVVISASAIPGNEKLVGQTINQLFKRGANVIYED 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M ++P+ V +HGE HL H +LA + GI + Sbjct: 364 I-SGVHVSGHASQEELKLMLNLVKPEFFVPVHGEFRHLHRHAKLAEEVGIPEKNIYIADI 422 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ ++ + E+ G L DG +G ++ + R+ LS G + V V +D Sbjct: 423 GDVISFTKRRVKKVGEIRAGQVLVDGLGVGDVGNIVLRDRKLLSEDGIIIVVVTIDKKGK 482 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I+ G Y + ++ V + + + +L+ +I AL + Sbjct: 483 ILSGPDIITRGF-VYIRESEELIAEATSRVEKALAECEANNITEWSVLKSTIRDALNDYI 541 Query: 539 KKVWGKKPLVTVFINKI 555 K + P++ I ++ Sbjct: 542 YKKIKRNPMILPIIMQV 558 >gi|229098267|ref|ZP_04229214.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] gi|229104360|ref|ZP_04235029.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|229117284|ref|ZP_04246662.1| Zn-dependent hydrolase [Bacillus cereus Rock1-3] gi|228666184|gb|EEL21648.1| Zn-dependent hydrolase [Bacillus cereus Rock1-3] gi|228679058|gb|EEL33266.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228685165|gb|EEL39096.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] Length = 556 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I + Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNNG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ + ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDNEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|170760000|ref|YP_001787877.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406989|gb|ACA55400.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 569 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 182/550 (33%), Positives = 300/550 (54%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ EIG N+ + Y ++IDCG+ FP DD+ G+D+V PDIT++ K + Sbjct: 26 PLGGLNEIGKNLTVIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVK 81 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IF+TH HEDH GAL + ++VPVY + +G++E K + + + + + Sbjct: 82 GIFLTHGHEDHIGALPYVLREVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIRPREII 141 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 142 RLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIGKR 201 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II AE+ Sbjct: 202 GVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAAEK 261 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP SA Sbjct: 262 FKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPMSA 321 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +HVS Sbjct: 322 LSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIHVS 380 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFP 426 GH +LK M+ +RP+ + +HGE HL H ELA Q V G ++ + Sbjct: 381 GHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGSPENHVMVSDIGDVIEVSR 440 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEI 485 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P+I Sbjct: 441 ECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGPDI 500 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V + + + + ++ +I LR L + +K Sbjct: 501 ISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTKRK 559 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 560 PMILPIIMEI 569 >gi|56963978|ref|YP_175709.1| zinc-dependent hydrolase [Bacillus clausii KSM-K16] gi|56910221|dbj|BAD64748.1| beta-lactamase superfamily Zn-dependent hydrolase [Bacillus clausii KSM-K16] Length = 555 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E++ LGGVGEIG NM YG I+ID G+ FP DD+ GVD+V PD++++ Sbjct: 5 ETEKVRVFALGGVGEIGKNM----YGIEVDEDIIVIDAGLMFPDDDMLGVDIVIPDVSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + I +TH HEDH G L + ++VPVYA+ +GL+E K + + Sbjct: 61 VENEERVRGIILTHGHEDHIGGLSYVLKKINVPVYATKLTLGLVEEKLKEAGIHRHAELR 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ +G + RV+HSIP+ + + + + G IVHTGD+K D + G D Sbjct: 121 LIDSNSRIKLGNTPVSFFRVSHSIPDCVGVCVETSQGAIVHTGDFKFDQTPVDGKHADIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + AIG +G+L LM DSTNA R GT SE K I D+ KG ++VT+F+S+V RI+ Sbjct: 181 KMAAIGQKGVLCLMSDSTNAERPGTTKSEAEAGKGIKDVFARTKGRLIVTSFASNVHRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A RK+ ++G S+ RV+S+A +G +K L + + + E++ ++ TG Sbjct: 241 QVIQAASATNRKLAVVGKSMVRVISIAGKLGYLKIPKDLLIDMDEVNKHKPEKVAILTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL ++++G R++ + DTVI ++ AIPGNE ++ + ++L G VI Sbjct: 301 SQGEPMSALTRMAKGAHRHITITPNDTVIIAATAIPGNETSVSAVIDQLYRIGAEVIYGS 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 VH SGH +LK M +RP+ + IHGE AH++LALQ GI + V Sbjct: 361 Q--AVHASGHGSQEELKLMLNLMRPKFFLPIHGEIRMQHAHQQLALQVGIKKERIYIVEK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G+++ +V G L DG +G ++ + RR LS G L V V L+ N Sbjct: 419 GEVIEFTKQQARRGPKVPSGHVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKKTN 478 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P I+ G Y + ++ + + V + + + L+ +I L Sbjct: 479 TIVSGPNIISRGF-VYVRESEELLEKSNELVTSILQKCVTENVNEWSSLKSNIREGLSRY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LFEKTKRRPMILPIIMEV 555 >gi|229134604|ref|ZP_04263414.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST196] gi|229168536|ref|ZP_04296259.1| Zn-dependent hydrolase [Bacillus cereus AH621] gi|228614942|gb|EEK72044.1| Zn-dependent hydrolase [Bacillus cereus AH621] gi|228648865|gb|EEL04890.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST196] Length = 556 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ + ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + +++G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNEV++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRSGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|308173418|ref|YP_003920123.1| ribonuclease J1 [Bacillus amyloliquefaciens DSM 7] gi|307606282|emb|CBI42653.1| ribonuclease J1 [Bacillus amyloliquefaciens DSM 7] gi|328553652|gb|AEB24144.1| ribonuclease J1 [Bacillus amyloliquefaciens TA208] gi|328911502|gb|AEB63098.1| ribonuclease J1 [Bacillus amyloliquefaciens LL3] Length = 555 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 164/558 (29%), Positives = 285/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNT----YGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D V S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + +G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVLNGRKVAVFGRSMESAIEIGQTLGYISCPKNTFIEHNEINRMPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + + ++ G DG IG ++ + RR LS G + V V ++ + + Sbjct: 419 GEVLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + G + + + + + + ++ I+ L Sbjct: 479 KVSAGPDLISRGF-VYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|228943546|ref|ZP_04105981.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973795|ref|ZP_04134372.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980350|ref|ZP_04140661.1| Zn-dependent hydrolase [Bacillus thuringiensis Bt407] gi|228779455|gb|EEM27711.1| Zn-dependent hydrolase [Bacillus thuringiensis Bt407] gi|228785947|gb|EEM33949.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816133|gb|EEM62323.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941509|gb|AEA17405.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 556 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 292/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ + + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENEERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|228909622|ref|ZP_04073445.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 200] gi|228849911|gb|EEM94742.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 200] Length = 556 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 173/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDIIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229180075|ref|ZP_04307419.1| Zn-dependent hydrolase [Bacillus cereus 172560W] gi|228603284|gb|EEK60761.1| Zn-dependent hydrolase [Bacillus cereus 172560W] Length = 556 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 VDLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|163941484|ref|YP_001646368.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163863681|gb|ABY44740.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 556 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ + ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + +++G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAVETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNEV++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRSGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|322421896|ref|YP_004201119.1| RNA-metabolising metallo-beta-lactamase [Geobacter sp. M18] gi|320128283|gb|ADW15843.1| RNA-metabolising metallo-beta-lactamase [Geobacter sp. M18] Length = 558 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 304/559 (54%), Gaps = 10/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++N L F+ LGG+GEIG+NMA + YG +++DCG+ FP+ + G+D+V PDI + Sbjct: 6 IENTGLKFVALGGLGEIGLNMAAFEYG----EDIVIVDCGLMFPEPYMLGIDVVIPDIGY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + AI +TH HEDH GAL + ++ P+Y + +G ++ K + +K Sbjct: 62 LLERADRIRAILLTHGHEDHIGALPYVLRDINPPIYGTALTLGFVKEKLKEFELDQKADL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + D V++G F +E +RV HS + AL I SP G ++HTGD+KLD + G++TD Sbjct: 122 RVVKPRDLVELGDFIVEFIRVAHSTVDGCALAITSPEGVVIHTGDFKLDQTPVDGELTDL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G G+LAL DSTN REG +SE+ + + +I + G V+V FSS++ R+ Sbjct: 182 PTFARYGQAGVLALFADSTNIEREGYTLSERVVGEAFDEIFPSCAGRVIVAAFSSNIHRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ AE+ GRK++L G S+ V +A ++G +K D L + + P+EQ+ +I T Sbjct: 242 QQVVHAAEKNGRKVLLNGRSMIANVQIARELGYLKIPDGLLMDLKELPRLPKEQVCMITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEPRS+L +++ + + +KL DTVI SSR IPGNE I + N L +G VI E Sbjct: 302 GSQGEPRSSLIRIAMDDHKQIKLERGDTVILSSRFIPGNEKTISDLMNHLYRRGAEVIHE 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +LK ++ ++P+ V +HGE HLV H +LA + G Sbjct: 362 KV-SEVHVSGHASQEELKLLHNLVKPRFFVPVHGEYRHLVKHAQLAQKVGTSEERCILAV 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ I+++V G DG +G ++ + R+ LS G + V + ++ Sbjct: 421 NGDVVLFSGGEACIVEQVNTGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVLIGINQVS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+IV G ++ + + K V+ T+ + D ++ + LR Sbjct: 481 GEIIYGPDIVSRGF-VFEDESQQYLDEAKKVVLDTLALVSAEALTDWNEVKLEVRRVLRR 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 K ++P++ + ++ Sbjct: 540 FFNKTIERRPVILPLVLEM 558 >gi|229018992|ref|ZP_04175834.1| Zn-dependent hydrolase [Bacillus cereus AH1273] gi|229025237|ref|ZP_04181659.1| Zn-dependent hydrolase [Bacillus cereus AH1272] gi|228736065|gb|EEL86638.1| Zn-dependent hydrolase [Bacillus cereus AH1272] gi|228742320|gb|EEL92478.1| Zn-dependent hydrolase [Bacillus cereus AH1273] Length = 556 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + VD ++ HSIP+++ + + G +V+TGD+K D I + Sbjct: 117 VDLKTIDSNSTVDFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNNG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRSGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ + ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDEEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|253702642|ref|YP_003023831.1| beta-lactamase [Geobacter sp. M21] gi|251777492|gb|ACT20073.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 558 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 185/554 (33%), Positives = 303/554 (54%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ LGG+GEIG+NMA + YG +++DCG+ FP+ + G+D+V PDI ++++ Sbjct: 11 LKFVALGGLGEIGLNMAAFEYG----DDIVIVDCGLMFPEPYMLGIDVVIPDIGYLIERV 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + AI +TH HEDH GAL + ++ P+Y + +G ++ K + +K+ + Sbjct: 67 DRIRAILLTHGHEDHIGALPYVLRDINPPIYGTALTLGFVKEKLKEFELDQKVDLRVVKP 126 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D V +G+F +E +RV HSI + AL I P G ++HTGD+KLD + G++TD + Sbjct: 127 RDTVQLGSFEVEFIRVAHSIVDGCALAISCPEGVVIHTGDFKLDQTPVDGELTDLATFSR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G +G+LAL DSTN REG +SE+ + +I G V+V FSS++ R++ ++ Sbjct: 187 YGEKGVLALFADSTNIEREGYTLSERLVGDAFEEIFPACSGRVIVAAFSSNIHRVQQVVR 246 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 AE+ GRK++L G S+ V +A ++G +K D L + + P+EQ+ +I TGSQGE Sbjct: 247 AAEKTGRKVLLNGRSMIGNVQIARELGYLKIPDDLLIDLKELPRLPKEQVCMITTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 PRS+L +++ + + +KL DTVI SSR IPGNE I + N L +G VI E Sbjct: 307 PRSSLIRIAMDDHKQIKLERGDTVILSSRFIPGNEKTISDLMNHLYRRGAEVIHEKV-SE 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKML 422 VHVSGH +LK ++ ++P+ V +HGE HLV H +LA + NG ++ Sbjct: 366 VHVSGHASQEELKLLHNLVKPRFFVPVHGEYRHLVKHSQLAQKVGTPEERCILAVNGDVV 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFG 481 D I+D+V G DG +G ++ + R+ LS G + V + ++ I Sbjct: 426 LFAGDEACIVDQVNTGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVIIGINQTTGEIIY 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G ++ + + + K V+ T+ + D ++ + LR L K Sbjct: 486 GPDIVSRGF-VFEDESQEYLEEAKKIVLDTLALVTPEAMTDWNEVKLEVRRVLRRLFNKT 544 Query: 542 WGKKPLVTVFINKI 555 ++P++ + ++ Sbjct: 545 LERRPVILPLVLEM 558 >gi|325662155|ref|ZP_08150773.1| hypothetical protein HMPREF0490_01511 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085952|ref|ZP_08335035.1| hypothetical protein HMPREF0987_01338 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471604|gb|EGC74824.1| hypothetical protein HMPREF0490_01511 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406875|gb|EGG86380.1| hypothetical protein HMPREF0987_01338 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 555 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 180/560 (32%), Positives = 305/560 (54%), Gaps = 15/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PDIT++ Sbjct: 5 SNSKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GAL + +++P+YA+ +G++E K + + Sbjct: 61 KDNIQKVKGFVITHGHEDHIGALSYVLKEMNLPIYATKLTMGIIENKLKEHNLLRCTRRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 121 VVRHGQSINLGQFRIEFIKTNHSIADASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 IG +G+LALM DSTNA R G +SE+ + K I + +++ TF+S+V R+ Sbjct: 181 RFAEIGKKGVLALMSDSTNAERPGFTMSERTVGKTFDQIFAEHRNTRIIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + RK+V+ G S+ ++S A ++G + D+ + + YP E+ ++I T Sbjct: 241 QQIINSAYKYDRKVVVEGRSMVNIISTASELGYLNVPDKTLIEIDQLKNYPDEKTVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + DTVIFSS IPGNE A+ + N L ++G VI + Sbjct: 301 GSQGESMAALSRMAADIHKKVSIKPGDTVIFSSNPIPGNEKAVSRVINELSQKGADVIFQ 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI V ++ Sbjct: 361 ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGIATALGIPKENVFILK 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G++L L +++D+V G L DG +G ++ + R+ L+ G L V + L+ Sbjct: 417 SGEVLALDNQSAKVVDKVQTGAILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTLEKGT 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALR 535 + P+IV G Y + + + + + + + + R D ++ I + Sbjct: 477 NQLLAGPDIVSRGF-VYVRESEGLMEEARQVLSDALENCLRNNRNADWSRIKLVIRDTMN 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + K ++P++ I + Sbjct: 536 DFIWKRTKRRPMILPIIMDV 555 >gi|294498107|ref|YP_003561807.1| ribonuclease J1 [Bacillus megaterium QM B1551] gi|294348044|gb|ADE68373.1| ribonuclease J1 [Bacillus megaterium QM B1551] Length = 555 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 158/558 (28%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 5 KNNQTAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +F+TH HEDH G + L L++P+YA A+GLL K + + Sbjct: 61 VKNADKIRGLFVTHGHEDHIGGIPYLLRELNIPIYAGKLALGLLRNKLDEHGLLRTAQLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + S+ R HSIP++ +V+++P G IVHTGD+K D + + + Sbjct: 121 EITEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPNGQIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + +I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEIPNFTMSERRVGDSIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A RK+ + G S++ + + +G I F+ P ++ ++ TG Sbjct: 240 QVVEAAVLHNRKVAVFGRSMEAAIEIGQQLGYISCPKDTFIEPSQINRIPANRVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN V++ + L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSKTIDMLFRAGAEVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H +LA G+ + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEYRMQKMHIKLATDCGVPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + ++ G DG IG ++ + RR LS G + V V ++ + Sbjct: 419 GEVLALSDSEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + + R ++ I+ L Sbjct: 479 KIAAGPDIISRGF-VYMRESGDLINDAQSLITKHLNKVMERRTSQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|30021887|ref|NP_833518.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29897443|gb|AAP10719.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 556 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNLTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229061400|ref|ZP_04198745.1| Zn-dependent hydrolase [Bacillus cereus AH603] gi|228717823|gb|EEL69471.1| Zn-dependent hydrolase [Bacillus cereus AH603] Length = 556 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 294/562 (52%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ + ++ HSIP+++ + + G +V+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + +++G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTV+ ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVVIAASPIPGNEISVSKIIDLLFRSGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 IY-YGERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGIKRENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|229140439|ref|ZP_04268994.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] gi|228643000|gb|EEK99276.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] Length = 556 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 291/562 (51%), Gaps = 13/562 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGH 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I + L G V Sbjct: 297 LTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + E VHVSGH +LK M ++P+ V +HGE AH LA GI + Sbjct: 357 VY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIF 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G ++ D ++ +V G L DG +G ++ + R+ LS G L V V L Sbjct: 416 IVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLG 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + V V + + +L+++I Sbjct: 476 KDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIREL 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 535 LGQFLYEETKRKPMILPIIMEV 556 >gi|154685860|ref|YP_001421021.1| YkqC [Bacillus amyloliquefaciens FZB42] gi|154351711|gb|ABS73790.1| YkqC [Bacillus amyloliquefaciens FZB42] Length = 555 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 164/558 (29%), Positives = 286/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNT----YGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D V S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + ++G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVLNGRKVAVFGRSMESAIEIGQNLGYITCPKNTFIEHNEINRLPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE H +LA GI + N Sbjct: 360 LN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + + ++ G DG IG ++ + RR LS G + V V ++ + + Sbjct: 419 GEVLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + G + + + + + + ++ I+ L Sbjct: 479 RVSAGPDLISRGF-VYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|152975132|ref|YP_001374649.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023884|gb|ABS21654.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 557 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 289/560 (51%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L LGGV EIG NM Y + +++DCG FP + L G+DL+ PDIT+ Sbjct: 3 MSENTLSIFALGGVNEIGKNMYALQY----KNEIVVVDCGSKFPDESLLGIDLIIPDITY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + ++ + +F+TH HEDH G + + L++P+YAS +GL+E K + + Sbjct: 59 LQENKEKIRGLFVTHGHEDHIGGIPYILKQLNIPIYASKLTLGLIELKLKEHHLQNQTKL 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + ++++ + + NHSIP+ + + + G +VHTGD+K D + D Sbjct: 119 IMVDSESEIELETMRLTFFKTNHSIPDCLGIAFHTDEGTVVHTGDFKFDLTPVNEQYPDI 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+LAL+ +STNA R G SE+ + + I + + A V+++TF+S+V+R+ Sbjct: 179 HKMANIGEKGVLALLSESTNAERAGFSPSERLVGERIEEAFQKAPRKVILSTFASNVNRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ + RK+ LLG S+ VVSVA++ G + + + + + E++ ++ T Sbjct: 239 QQVVKACLKTKRKLALLGRSMVNVVSVAMEQGYLTIPEGMLIEADEINRLDPEKVAILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+L+ G R V++ +DTVI ++ IPGNE + I + L G VI Sbjct: 299 GSQGEPMAALARLASGSYRQVEILPEDTVIIAATPIPGNERNVSRIIDNLFVLGANVIYG 358 Query: 360 DAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH Y +LK M ++P+ + IHGE L H LA G+ + + Sbjct: 359 TGSSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESVGVQKENIFII 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +NG ++ + + G DG IG + + R+QLS G L + + L Sbjct: 419 KNGDVVDIRKQVAYQSRRIPAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLIIVITLSKT 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 ++ P+I+ G Y D + K + ++V+ T+ L Q +L++ I L Sbjct: 479 DGDMISEPDIISRGF-IYVRDSEEFLKEINQSVVETIQRLQQSYTGQWSILKKEIREKLG 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 538 QFIYTSTKRKPMILPIIIEV 557 >gi|238916714|ref|YP_002930231.1| hypothetical protein EUBELI_00776 [Eubacterium eligens ATCC 27750] gi|238872074|gb|ACR71784.1| Hypothetical protein EUBELI_00776 [Eubacterium eligens ATCC 27750] Length = 556 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 184/562 (32%), Positives = 301/562 (53%), Gaps = 17/562 (3%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + +PLGG+ +IGMN+ Y I++DCG+SFP++D+ G+DLV PD Sbjct: 1 MKKAENASVRIIPLGGLEQIGMNITAIEY----DDSIIVVDCGLSFPEEDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +T++ + + ITH HEDH GA+ + ++VP+YA+ +GL+E+K + K Sbjct: 57 VTYLKENLNKVKGFVITHGHEDHIGAIPYVLKDVNVPIYATKLTMGLIESKLKEHNMLKS 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + G V +G F +E +R NHSI + AL I SP G IVHTGD+K+D + GD Sbjct: 117 VKRKVVKYGQSVTLGDFRVEFIRTNHSIADAAALAIYSPAGIIVHTGDFKVDYTPVYGDP 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D L +G +G+LALMCDSTNA+R G +SEK + I + K +++ TF+S+ Sbjct: 177 IDLQRLGELGKKGVLALMCDSTNALRPGFTMSEKTVGATFEKIFNDNKNSRIIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + GRK+ + G S+ ++ VA D+ +K D + + Y EQ++ Sbjct: 237 VDRVQQIINSAVKYGRKVCVEGRSMVNIIEVAEDLDYLKIPDGTLIETDEMKNYTPEQIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ R V + D V+FSS IPGNE ++ + N L +G + Sbjct: 297 LITTGSQGESMAALSRMAANLHRKVSIQLGDCVVFSSTPIPGNEKSVAKVINELGMKGAK 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACV 413 VI + HVSGH ++K +Y ++P+ + +HGE HLVA +++ + G V Sbjct: 357 VIFQ----DTHVSGHACQEEIKLIYSLVKPKYSIPVHGEYRHLVAQRDVVMSLGYDKDHV 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 ++G +L L + +++D V G DG +G ++ + R+ L+ G + V + L Sbjct: 413 IIAKSGDVLELNDEHAQVVDHVQTGAIFVDGLGVGDVGNIVLRDRQNLAENGIIIVVLTL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + + P+IV G Y + ++ V +V D ++ I Sbjct: 473 EKYTGQLIAGPDIVTRGF-VYVREAEELLDEARAIVSDSVEKCLDKNITDWSKIKNIIKD 531 Query: 533 ALRSLLKKVWGKKPLVTVFINK 554 L L K + P++ I + Sbjct: 532 DLSEYLWKKIKRNPVILPIIME 553 >gi|253580721|ref|ZP_04857985.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848092|gb|EES76058.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 582 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 182/557 (32%), Positives = 301/557 (54%), Gaps = 14/557 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ +IGMN+ + Y +++DCG++FP+DD+ G+DLV PD+T++ Sbjct: 34 TSKLKIIPLGGLEQIGMNITAFEY----EDSIVVVDCGLAFPEDDMLGIDLVIPDVTYLK 89 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + ITH HEDH GAL + ++VPVY++ I L+ K ++ Sbjct: 90 ENISKVKGFVITHGHEDHIGALPYVLKDVNVPVYSTKLTIALIANKLKEHNMTNTTKLKE 149 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G +++G FSIE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 150 VRHGQVINLGDFSIEFIKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQR 209 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIR 241 IG +G+LALMCDSTNA R G +SE+ + ++ K +++ TF+S+V R++ Sbjct: 210 FAEIGRKGVLALMCDSTNAERTGFTMSERSVGHVFDNLFNEYKTNRIIIATFASNVDRVQ 269 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A + GRK+ + G S+ V++ A ++G ++ DQ + + YP EQ+++I TG Sbjct: 270 QIINTAYRFGRKVAVEGRSMVNVITTAAELGYLRIPDQTLIEIDQVKNYPDEQVVLITTG 329 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ + + + DT+IFSS IPGNE A+ + N L +G +VI + Sbjct: 330 SQGESMAALSRMAANIHKKIVIKPNDTIIFSSNPIPGNEKAVSKVINELSMKGAKVIFQ- 388 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH ++K +Y ++P+ + +HGE HL A K + + GI + + + Sbjct: 389 ---DVHVSGHACQEEIKLIYSLVKPKYAIPVHGEYRHLTAQKNVVEELGIPKENIFVLAS 445 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G +L L ++ V G L DG +G ++ + R+ L+ G + V V L+ H N Sbjct: 446 GNILELDSQSAQVTGTVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVVTLERHSN 505 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + + + V + + D ++ + AL Sbjct: 506 VILAGPDIVSRGF-VYVRESEDLMDGAREVVENALDSCLERNITDWGKIKTVVKDALSEF 564 Query: 538 LKKVWGKKPLVTVFINK 554 L K + P++ I + Sbjct: 565 LWKRTKRSPMILPIIME 581 >gi|308513338|ref|NP_954154.2| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|41152918|gb|AAR36504.2| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|298507141|gb|ADI85864.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 561 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 186/557 (33%), Positives = 298/557 (53%), Gaps = 10/557 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+GEIG+NM Y +G I+ DCG+ FP+ + G+DLV PDIT++ Sbjct: 11 NGGLRIIPLGGLGEIGLNMMAYEHG----EDIIVADCGLMFPEPQMLGIDLVIPDITYLR 66 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + I +TH HEDH GAL + L +P+Y + +G + K + ++ Sbjct: 67 ERAGRVRGILLTHGHEDHIGALPYVLQELSLPLYGTALTLGFIREKLKEFDLESEVELNV 126 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + D V +G FS+E +RV+HSI + AL IR+P G ++HTGD+K+D + G++TD + Sbjct: 127 VKPRDVVTLGCFSVEFIRVSHSIVDGCALAIRTPEGVVIHTGDFKIDQTPVDGELTDLAT 186 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G+EG+LAL+ DSTN REG +SE+ + + +I +G ++V FSS++ R++ Sbjct: 187 FSRYGDEGVLALLADSTNVEREGYTLSERVVGEAFDEIFPRCEGRIIVAAFSSNIHRVQQ 246 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIATGS 301 +D A + GRK++L G S+ V++A +G ++ + L + P+EQ+ +I TGS Sbjct: 247 AVDAAVRCGRKVLLNGRSMVANVAIARQLGYLRMPEGVLTDLKELQHLPKEQVCMITTGS 306 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP S+LA+++ + + +KL DTVI SSR IPGNE I + N L +G V E Sbjct: 307 QGEPMSSLARIAMDDHKQIKLEAGDTVILSSRFIPGNEKTISDLINHLYRRGAEVFHEKV 366 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH +LK M RP+ V +HGE HLV H LA + G+ NG Sbjct: 367 -SEVHVSGHASQEELKLMLNLTRPRHFVPVHGEYRHLVKHARLAQRVGVPAERCLVAVNG 425 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++R EI V G DG IG ++ + R+ LS G + V + ++ Sbjct: 426 DVIRFADGRGEIAGAVESGRVYIDGKGIGDVGEVVLKDRKHLSEDGMVVVIIAINQASGE 485 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+IV G ++ + + K V+ + + + +++ + LR Sbjct: 486 VIYGPDIVSRGF-VFEDESQQYLDETKKIVLDLLAGMSIETLGEWGEVKQEVRRILRRFF 544 Query: 539 KKVWGKKPLVTVFINKI 555 K ++P++ I ++ Sbjct: 545 NKTIERRPVILPVILEM 561 >gi|229155281|ref|ZP_04283392.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|228628206|gb|EEK84922.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] Length = 550 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 178/555 (32%), Positives = 288/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM + S ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYVI----QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D GA + NHSIP+ + +V +P G IVHTGD+K D + D + Sbjct: 117 ESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALISESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 297 PMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + ++ G DG IG + + R+QLS G L + + + I Sbjct: 417 VDISNQVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ ++ + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKHIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 STKRKPMILPIIIEV 550 >gi|295703456|ref|YP_003596531.1| ribonuclease J1 [Bacillus megaterium DSM 319] gi|294801115|gb|ADF38181.1| ribonuclease J1 [Bacillus megaterium DSM 319] Length = 557 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 158/558 (28%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 7 KNNQTAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +F+TH HEDH G + L L++P+YA A+GLL K + + Sbjct: 63 VKNADKIRGLFVTHGHEDHIGGIPYLLRELNIPIYAGKLALGLLRNKLDEHGLLRTAQLH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + S+ R HSIP++ +V+++P G IVHTGD+K D + + + Sbjct: 123 EITEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPNGQIVHTGDFKFDFTPVG-EPANLT 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + +I+DI + G ++ TF+S++ R++ Sbjct: 182 KMAEIGKEGVLCLLSDSTNSEIPNFTMSERRVGDSIHDIFRKVDGRIIFATFASNIHRLQ 241 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A RK+ + G S++ + + +G I F+ P ++ ++ TG Sbjct: 242 QVVEAAVLHNRKVAVFGRSMEAAIEIGQQLGYISCPKDTFIEPSQINRIPANRVTILCTG 301 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN V++ + L G VI Sbjct: 302 SQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSKTIDMLFRAGAEVIHGA 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H +LA G+ + N Sbjct: 362 LN-DIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEYRMQKMHIKLATDCGVPEENCFIMDN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + ++ G DG IG ++ + RR LS G + V V ++ + Sbjct: 421 GEVLALSDSEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDF 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + + + + R ++ I+ L Sbjct: 481 KIAAGPDIISRGF-VYMRESGDLINDAQSLITKHLNKVMERRTSQWSEIKNEITDTLAPF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 540 LYEKTKRRPMILPIIMEV 557 >gi|302671969|ref|YP_003831929.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] gi|302396442|gb|ADL35347.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] Length = 559 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 187/557 (33%), Positives = 298/557 (53%), Gaps = 14/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L +PLGG+ +IGMN+ + Y I++DCG+SFP DD+ G+DLV PDIT++ Sbjct: 8 NTSKLQVIPLGGLEQIGMNITAFRY----EDSIIVVDCGLSFPDDDMLGIDLVIPDITYL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GAL + L+VPVYA+ +G++E K + Sbjct: 64 QENIDKVKGFVITHGHEDHIGALPYVLHELNVPVYATRLTMGIIEHKLEEHNLLGNTRRK 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F +E +R NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 124 VVKFGQSINLGQFRVEFIRTNHSIVDAAALAIYSPAGIVVHTGDFKVDYTPVYGDPIDLQ 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRI 240 IG +G+LALMCDSTNA R G SEK + + + + + ++V TF+S+V R+ Sbjct: 184 RFAEIGKKGVLALMCDSTNAERPGFTASEKTVGRTLASLFDEHENNRIIVATFASNVDRV 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+V+ G S+ ++ +A + I+ D + + YP + ++I T Sbjct: 244 QQIINTAHKCGRKVVVEGRSMVSIIDIAQKLECIQIPDNTLIDIDQLKDYPENKTVIITT 303 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G+ R + + DTVIFSS IPGNE ++ +I N L +G VI + Sbjct: 304 GSQGESMAALSRMASGQHRKLSIGAGDTVIFSSHPIPGNEKSVTNIINELQMKGADVIFQ 363 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH D+K +Y ++P+ V +HGE HL+A +A GI + + Sbjct: 364 ----DVHVSGHACQEDIKLIYTLVKPKYSVPVHGEYRHLIAQANIARDLGIAKENIFILH 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G +L + + +I +V G L DG +G ++ + R+ L+ G + V +D + Sbjct: 420 SGDVLEMDDEGAKIKGKVPCGAILVDGLGVGDVGNVVLRDRQHLAEDGIVIVVFGIDKEN 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P IV G Y + K+ V+ V + D L+ + AL Sbjct: 480 GQLISGPSIVSRGF-VYVRESDKLIDDATDLVLDDVTEALDKGITDWGKLKNIVKDALSD 538 Query: 537 LLKKVWGKKPLVTVFIN 553 + K ++P++ I Sbjct: 539 YIWKKTKRRPMIMPIIM 555 >gi|148380514|ref|YP_001255055.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 3502] gi|148289998|emb|CAL84117.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] Length = 567 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 183/550 (33%), Positives = 301/550 (54%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ EIG N+ Y ++IDCG+ FP DD+ G+D+V PDIT++ K + Sbjct: 24 PLGGLNEIGKNLTAIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVK 79 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IF+TH HEDH GAL + ++VPVY + +G++E K + + + + + Sbjct: 80 GIFLTHGHEDHIGALPYVLRAVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIKPREII 139 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 140 RLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIGKR 199 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II AE+ Sbjct: 200 GVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAAEK 259 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP SA Sbjct: 260 FKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPMSA 319 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +HVS Sbjct: 320 LSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIHVS 378 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH +LK M+ +RP+ + +HGE HL H ELA Q G+ V G ++ + Sbjct: 379 GHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGLPENHVMVSDIGDVIEVSR 438 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEI 485 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P+I Sbjct: 439 ECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGPDI 498 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V + + + + ++ +I LR L + +K Sbjct: 499 ISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTKRK 557 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 558 PMILPIIMEI 567 >gi|212639725|ref|YP_002316245.1| mRNA degradation ribonucleases J1/J2 [Anoxybacillus flavithermus WK1] gi|212561205|gb|ACJ34260.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Anoxybacillus flavithermus WK1] Length = 555 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 166/559 (29%), Positives = 291/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N Y + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 4 LKNKQVGVFALGGLGEIGKNTYGVQY----EDEIIIIDAGIKFPEDELLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K +N+ +FITH HEDH G + L ++VP+Y A+GL+ K + ++ Sbjct: 60 LVKNAENIKGLFITHGHEDHIGGIPYLLRQVNVPIYGGKLALGLIRNKLEEHGLLRQTKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + G ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIKEDDVISFGKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVQGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + +G IK F+ P ++ ++ T Sbjct: 239 QQVTEAAVLNNRKIAVFGRSMEAAIEIGQQLGYIKCPKDTFVDATQINRLPAHRVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ I N L G VI Sbjct: 299 GSQGEPMAALSRIANGSHRQIQIMPGDTVVFSSSPIPGNTVSVNRIINMLARAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PL-SDIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHVKLAVDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L + + I+ ++ G DG IG ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGISEEGASIVGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + L + ++ I+ L Sbjct: 478 MKIAAGPDIISRGF-VYMRESGNLINDAQQLIAKHLQQLLEQGTNQWSDIKTEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 537 FLYEKTKRKPMILPIIMEV 555 >gi|153931086|ref|YP_001384801.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935734|ref|YP_001388271.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|168180552|ref|ZP_02615216.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226949914|ref|YP_002805005.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|152927130|gb|ABS32630.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931648|gb|ABS37147.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|182668628|gb|EDT80607.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226841039|gb|ACO83705.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|322806896|emb|CBZ04466.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Clostridium botulinum H04402 065] Length = 569 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 183/550 (33%), Positives = 301/550 (54%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ EIG N+ Y ++IDCG+ FP DD+ G+D+V PDIT++ K + Sbjct: 26 PLGGLNEIGKNLTAIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVK 81 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IF+TH HEDH GAL + ++VPVY + +G++E K + + + + + Sbjct: 82 GIFLTHGHEDHIGALPYVLRAVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIKPREII 141 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 142 RLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIGKR 201 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II AE+ Sbjct: 202 GVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAAEK 261 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP SA Sbjct: 262 FKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPMSA 321 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +HVS Sbjct: 322 LSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIHVS 380 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH +LK M+ +RP+ + +HGE HL H ELA Q G+ V G ++ + Sbjct: 381 GHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGLPENHVMVSDIGDVIEVSR 440 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEI 485 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P+I Sbjct: 441 ECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGPDI 500 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V + + + + ++ +I LR L + +K Sbjct: 501 ISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTKRK 559 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 560 PMILPIIMEI 569 >gi|138894587|ref|YP_001125040.1| Zn-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] gi|134266100|gb|ABO66295.1| Zn-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 555 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 161/559 (28%), Positives = 288/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 4 LTDQQVGVFALGGLGEIGKNT----YGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + + +FITH HEDH G + L +++P+Y A+GL+ K + ++ Sbjct: 60 LVKHAEKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + D+G IK F+ P Q+ ++ T Sbjct: 239 QQVTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANQVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PLN-DIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L + I+ ++ G DG +G ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGISDSEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + G + + + + + + ++ I+ L Sbjct: 478 FKIAAGPDIISRGF-VYMRESGDLISEAQALITKHLEKVLERKTNQWSEIKNEITETLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYERTKRRPMILPIIMEI 555 >gi|154504521|ref|ZP_02041259.1| hypothetical protein RUMGNA_02025 [Ruminococcus gnavus ATCC 29149] gi|153795003|gb|EDN77423.1| hypothetical protein RUMGNA_02025 [Ruminococcus gnavus ATCC 29149] Length = 554 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 182/563 (32%), Positives = 304/563 (53%), Gaps = 17/563 (3%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E +L +PLGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PD Sbjct: 1 MKKENRGKLKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +T++ + ITH HEDH GAL + +++P+Y + +G++E K + + Sbjct: 57 VTYLKDNISKVKGFVITHGHEDHIGALPYVLKEINLPIYTTKLTMGIIENKLKEHNLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD Sbjct: 117 TKRKVVRHGQSINLGQFRIEFIKTNHSIQDASALAIYSPAGTVVHTGDFKVDYTPVFGDA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D IG +G+LALM DSTNA R+G SE+ + I + +++ TF+S+ Sbjct: 177 IDLQRFAEIGKKGVLALMSDSTNAERKGFTQSERTVGITFDHIFAEHQNTRIIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + GRK+V+ G S+ +++ A ++G + + + + YP E+ + Sbjct: 237 VDRVQQIINSAYKYGRKVVVEGRSMVNIITTASELGYLNVPENTLIEIDQLKNYPPEKTV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ R V + DT+IFSS IPGNE A+ + N L +G Sbjct: 297 LITTGSQGESMAALSRMAGDVHRKVTIQPNDTIIFSSNPIPGNEKAVSRVINELSAKGAN 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI + HVSGH +LK +Y ++P+ + +HGE HL A+ E+A GI + Sbjct: 357 VIFQ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAEIAQSLGIPKENI 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +++G ++ L +I+D+V G L DG +G ++ + R+ L+ G L V + L Sbjct: 413 FIIQSGDVIELSDAEAKIVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + N+ P+IV G Y + + + K V ++ R D ++ +I Sbjct: 473 EKGSNNLLAGPDIVSRGF-VYVRESEGLMEEARKVVTDSLDKCLSGRHADWNKIKMTIRD 531 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 + + K ++P+V I + Sbjct: 532 TMNDFIWKKTKRRPMVIPIIMDV 554 >gi|260589073|ref|ZP_05854986.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|331082503|ref|ZP_08331628.1| hypothetical protein HMPREF0992_00552 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540493|gb|EEX21062.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|330400481|gb|EGG80111.1| hypothetical protein HMPREF0992_00552 [Lachnospiraceae bacterium 6_1_63FAA] Length = 555 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 180/563 (31%), Positives = 303/563 (53%), Gaps = 18/563 (3%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK +L +PLGG+ +IGMN+ + Y I++DCG+SFP+DD+ G+DLV PD Sbjct: 1 MKKNNNGKLRIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLSFPEDDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +T++ + + ITH HEDH GAL + ++VP+YA+ +GL++ K + + Sbjct: 57 VTYLKENIDKVKGFVITHGHEDHIGALPYVLREINVPIYATKLTVGLIDNKLKEHNLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE ++ NHSI + AL I SP G ++HTGD+K+D + GD Sbjct: 117 TKRKVIKHGQSINLGCFRIEFIKTNHSIQDASALAIYSPAGIVIHTGDFKVDYTPVFGDA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D IG +G+LALMCDSTNA R+G +SE+ + K +I K +++ TF+S+ Sbjct: 177 IDLQRFAEIGKKGVLALMCDSTNAERKGFTMSERTVGKTFDNIFAEHKNTRIIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + GRK+ + G S+ V+ A ++G ++ D+ + + YP ++++ Sbjct: 237 VDRVQQIINSAYKYGRKVAVEGRSMVNVIGTAAELGYLQIPDKTLIDIDQIKNYPDDKVV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ + V + DT+IFSS IPGNE A+ + N L +G Sbjct: 297 LITTGSQGESMAALSRMAANIHKKVTIKPNDTIIFSSNPIPGNEKAVSRVINELSRKGAD 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI + HVSGH ++K +Y ++P+ + +HGE HL A ++A GI + Sbjct: 357 VIFQ----DAHVSGHACQEEIKLIYSLVKPKYSIPVHGEYRHLKAQAQIASDLGIPKENI 412 Query: 414 PPVRNGKMLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 + +G +L L + ++ ++V G L DG +G ++ + R+ L+ G + V + Sbjct: 413 FILSSGDVLELNEEEPAKVKEKVRTGAILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVLT 472 Query: 473 LDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 L+ H + P+IV G Y + + V + D ++ I Sbjct: 473 LEKHSSRLLAGPDIVSRGF-VYVRESEDLMDEARIVVEDAIDVCLDKHITDWGKIKNIIK 531 Query: 532 SALRSLLKKVWGKKPLVTVFINK 554 +L L K + P++ I + Sbjct: 532 DSLGDFLWKRTKRNPMILPIIME 554 >gi|195970182|ref|NP_385387.2| hypothetical protein SMc01929 [Sinorhizobium meliloti 1021] gi|307301106|ref|ZP_07580875.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti BL225C] gi|307317840|ref|ZP_07597278.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti AK83] gi|187904167|emb|CAC45860.2| Hypothetical protein SMc01929 [Sinorhizobium meliloti 1021] gi|306896602|gb|EFN27350.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti AK83] gi|306904061|gb|EFN34647.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti BL225C] Length = 555 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 315/554 (56%), Positives = 424/554 (76%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++EELVFLPLGGVGEIGMN+ LYGYG P R+WIM+DCGV+FP +LPGVDLV PDI F+ Sbjct: 3 QDEELVFLPLGGVGEIGMNLGLYGYGRPGHRQWIMVDCGVTFPGPELPGVDLVLPDIAFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++R+NL AI ITHAHEDHYGAL+DLW L+VPVYASPF G+LEAKR +E+ +IP Sbjct: 63 AEQRRNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRAFEKSRSEIPIT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ GD+++VG FS+E+V VNHSIPE MALVIR+ +G +VHTGDWK+D + LG +TD+ Sbjct: 123 IFKQGDRINVGPFSVEAVGVNHSIPEPMALVIRTQLGTVVHTGDWKIDLEPSLGPLTDES 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 IG EG+LAL+CDSTNA+REG SE+ + +++ I+ +A+G V +TTFSS+V RIR Sbjct: 183 RFRQIGEEGVLALVCDSTNALREGVSPSERQVSESLAKIIADAEGRVGITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+ + AE GR+++LLGSS+KRVV VA DVG+++ + FL+++ FG PR++++VI TGS Sbjct: 243 SVAEAAEAAGREVLLLGSSMKRVVDVARDVGLMEGVKPFLAEDEFGYIPRDKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+++R EMRNV + DT++FSSR IPGNE AI IKN L+EQG+ +I + + Sbjct: 303 QGEPRAALAKIARDEMRNVAFSAGDTIVFSSRTIPGNEKAINDIKNGLIEQGIHIITD-S 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP +L++MYQW++PQ+LV +HGE HL AH EL LQ GI VP +RNG+M Sbjct: 362 EALVHVSGHPRRTELQQMYQWVKPQILVPVHGEAAHLTAHAELGLQSGIPSVPRLRNGEM 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E+IDE HG KDG LIG F ++GI +RR+LSF GH+SV+V+LD+ Y+ G Sbjct: 422 LRLAPGPAEVIDEAPHGRIYKDGTLIGDFEEMGIGERRKLSFAGHVSVSVVLDSRYDFLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+P +D +G + L V+ V +P+ +RKDL +L+E++ A+RS +V Sbjct: 482 DPDVVPIGLPEFDDEGEAMEDTLYDAVLGAVESIPRAKRKDLAMLQEAVRRAVRSTTNQV 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVFI K+ Sbjct: 542 WGKKPVVTVFITKV 555 >gi|255282415|ref|ZP_05346970.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] gi|255266999|gb|EET60204.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] Length = 555 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 187/561 (33%), Positives = 309/561 (55%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + N +L +PLGG+ +IGMN+ + + I++DCG+SFP+DD+ G+DLV PD+T+ Sbjct: 4 INNSKLRIIPLGGLEQIGMNITAFEF----EDSIIVVDCGLSFPEDDMLGIDLVIPDVTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + ITH HEDH GAL + ++VP+YA+ +G++E K + K Sbjct: 60 LKDNIDKVKGFVITHGHEDHIGALPYVIKEINVPIYATKLTMGIIENKFTEHNLLKSTKR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 120 KIVKHGQSINLGMFRIEFIKTNHSIADAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 IG +G+LALMCDSTNA R+G +SE+ + + +I + +++ TF+S+V R Sbjct: 180 QRFAEIGKKGVLALMCDSTNAERQGFTMSERTVGRTFDNIFAEHRNTRIIIATFASNVDR 239 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II+ A + GRK+V+ G S+ ++S+A ++G + D + E YP EQ+++I Sbjct: 240 VQQIINSAYKYGRKVVVEGRSMVSIISIAAELGYLNIPDYTLIDVEQMKNYPDEQMVLIT 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++ R V + DTVIFSS IPGNE A+ + N L +G VI Sbjct: 300 TGSQGESMAALSRMASDMHRKVSIKPGDTVIFSSHPIPGNEKAVSKVINELSAKGADVIF 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + HVSGH ++K +Y + P+ + +HGE HL A +LA GI + + Sbjct: 360 Q----DAHVSGHACQEEIKLIYSLVHPKYAIPVHGEYRHLKAQAQLAQSLGIPKDRIFIM 415 Query: 417 RNGKMLRLF-PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 ++G++L L +P +I +V G L DG +G ++ + R+ L+ G + V + L+ Sbjct: 416 KSGQVLELDENEPAKITGQVQTGAILVDGLGVGDVGNIVLRDRQHLAEDGIVIVVLTLER 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + N + P+IV G Y + + K + + R D ++ +I L Sbjct: 476 YTNQVLAGPDIVSRGF-VYVRESEDLMGEARKVIEEALAYCETKRISDWSKIKNTIRDEL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + K + P++ I ++ Sbjct: 535 NNFIWKKTKRSPMILPIIMEV 555 >gi|47566090|ref|ZP_00237128.1| Zn-dependent hydrolase [Bacillus cereus G9241] gi|47557007|gb|EAL15337.1| Zn-dependent hydrolase [Bacillus cereus G9241] Length = 550 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 176/555 (31%), Positives = 287/555 (51%), Gaps = 10/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM + S ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYVI----QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D GA + NHSIP+ + +V +P G IVHTGD+K D + D + Sbjct: 117 ESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA + G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALISESTNAEQPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNHLDPSQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G RVI Sbjct: 297 PMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGARVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + ++ G DG IG + + R+QLS G L + + + + Sbjct: 417 VDISNQVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEMI 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ ++ + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKYIYT 535 Query: 541 VWGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 536 STKRKPMILPIIIEV 550 >gi|311067968|ref|YP_003972891.1| YkqC protein [Bacillus atrophaeus 1942] gi|310868485|gb|ADP31960.1| YkqC [Bacillus atrophaeus 1942] Length = 555 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + ++ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY AIGLL K + ++ Sbjct: 61 VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + ++ R HSIP++ +V+++P GNIVHTGD+K D + + D Sbjct: 121 IIGEDDIIKFRKTAVSFFRTTHSIPDSYGVVVKTPPGNIVHTGDFKFDFTPVG-EPADLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 +I+ A GRK+ + G S++ + + ++G I + F+ P ++ ++ TG Sbjct: 240 QVIEAAVLNGRKVAVFGRSMESAIEIGQNLGYINCPKNTFIEHNEINRIPANKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ N+L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE H +LA GI + N Sbjct: 360 L-SDIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMQKMHIKLATDCGIPEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L + + ++ G DG IG ++ + RR LS G + V V +D N + Sbjct: 419 GEVLALKGNEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSMDMNEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + + + + + ++ I+ L Sbjct: 479 KISAGPDLISRGF-VYMRESGDLIHDAQELISNHLETVMERKTTQWSEIKNEITDTLAPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPIIMEV 555 >gi|126649808|ref|ZP_01722044.1| hypothetical protein BB14905_16460 [Bacillus sp. B14905] gi|126593527|gb|EAZ87472.1| hypothetical protein BB14905_16460 [Bacillus sp. B14905] Length = 555 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 283/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+DDL G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH G + L ++VPVY A+GLL K + + I Sbjct: 61 VRNVDKIKGLFITHGHEDHIGGIPYLLRQVNVPVYGGKLALGLLRNKLEEHGLLRTTKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP+ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIKEDDVIKFRKTSVSFFRTTHSIPDAYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG + +L L+ DSTNA + +SE+ + K+I +I + ++ TF+S++ R++ Sbjct: 180 KMAEIGRDCVLCLLSDSTNAEKPNFTMSERTVGKSIDEIFRKVDSRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 D A + GRKI + G S+ +++ ++G I F+ +S P +++++ TG Sbjct: 240 QATDAAIKYGRKIAVFGRSMDNAITIGRELGYINAPKDTFIDAQSINRLPANEVMILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTVIFSS +PGN V++ I N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVIFSSSPVPGNTVSVNKIINLLFRAGAEVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H LA + + N Sbjct: 360 LN-NIHTSGHGSQEEQKLMLRLMKPKFFMPIHGEYRMLKMHTHLAEDCDVPLENTFVMEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + + G DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALSANEAHVAGRIPSGDVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSVDMENQ 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + K + + + Q + L+ I+ L Sbjct: 479 KIVSGPDIISRGF-VYMRESGTMINEAQKMLNRHLNETIQSKTPQWTELKNEITDVLGPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LFEKTKRRPMILPIIMEV 555 >gi|255525919|ref|ZP_05392846.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255510413|gb|EET86726.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 556 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 191/559 (34%), Positives = 305/559 (54%), Gaps = 11/559 (1%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN+ ++ +PLGG+GEIG NM Y + I+IDCG+ FP ++ GVDLV PDIT Sbjct: 3 MKNKSKVKVIPLGGLGEIGKNMTAIEY----DNEIIVIDCGLGFPDMEMYGVDLVIPDIT 58 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ R + + +TH HEDH GAL + L+VPVY + +GL+E+K + Sbjct: 59 YLLNNRDKVKGVMLTHGHEDHIGALPYVLKQLNVPVYGTRLTLGLVESKLEEHEMLSNCT 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G++V F IE +R HSI + AL I +P G IVHTGD+K+D I GDV D Sbjct: 119 LLEVKTGEEVKTENFRIEFIRSCHSIADACALAIHTPEGVIVHTGDFKVDYMPIDGDVID 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+ G+L LM DSTN R G +SE+ I N+ I AKG V+V TF+S+ +R Sbjct: 179 LHQFAKLGSRGVLLLMADSTNVERPGYTVSERIIGDNLTGIFSKAKGRVIVATFASNTNR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 I+ II+ + GRK+ G S++++ S+A+++G +K + +S + YP +++ +I Sbjct: 239 IQQIINSSLFYGRKVAFSGRSMEKISSMAMELGYMKLSEDQLISVDDINKYPSDKITIIT 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ R + + + D VI S+ IPGNE I + + L +G VI Sbjct: 299 TGSQGEPMAALSRIAYSNHRKITIEKGDVVIISASPIPGNEKLISKLIDELFRKGAEVIY 358 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 E VHVSGH +LK M+ I+P+ + +HGE HL H+ LA + + Sbjct: 359 NALE-EVHVSGHACQEELKLMHTLIKPKFFMPVHGEYRHLKQHELLAENLGMDSKNIFVL 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG++L L + +V G + DG IG ++ + R+ LS G +++ V +D Sbjct: 418 ENGQVLELNRNSAARSAKVTCGTVMIDGLGIGDVGNIVLRDRKHLSQDGVVTIVVTIDKA 477 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 ++I P+I+ G Y + G + V + + + KD ++ +I +L Sbjct: 478 SFSILSGPDIITRGF-VYMKESGDLINEARGVVKAELDKCMESKIKDWFTIKSNIKYSLG 536 Query: 536 SLLKKVWGKKPLVTVFINK 554 L ++P++ I + Sbjct: 537 GFLYNKTRRRPIILPIIME 555 >gi|160895349|ref|ZP_02076120.1| hypothetical protein CLOL250_02908 [Clostridium sp. L2-50] gi|156863042|gb|EDO56473.1| hypothetical protein CLOL250_02908 [Clostridium sp. L2-50] Length = 554 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 182/560 (32%), Positives = 299/560 (53%), Gaps = 14/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ + +PLGG+ +IGMN+ Y I+IDCG++FP+DD+ G+DLV PD+T+ Sbjct: 4 LNSDAVKIIPLGGLEQIGMNITAIEY----EDSIIVIDCGLAFPEDDMLGIDLVIPDVTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +TH HEDH GA+ + L++P+YA+ +GL+E K + Sbjct: 60 LKENADKVKGLVVTHGHEDHIGAIPYIEKELNMPIYATKLTMGLIENKLKEHNLMNNTRR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G + +G F IE ++ NHSI ++ AL I +P G +VHTGD+K+D + GD+ D Sbjct: 120 KVVKYGQNIILGKFRIEFIKTNHSIADSAALAIYTPAGLLVHTGDFKIDYTPVFGDMIDL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 +G +G+LALM DSTNA REG SEK + + ++ N +++ TF+S+V R Sbjct: 180 QRFAELGKKGVLALMADSTNAEREGFTKSEKTVGRTFDNLFNDNQNHRIIIATFASNVDR 239 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II+ A + GRK+++ G S+ ++S A ++G I D + YP E+L++I Sbjct: 240 VQQIINSAYKYGRKVIIEGRSMVNIISTASELGYIDIPDNTLIDISQIKNYPDEKLVLIT 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++ + + D VIFSS IPGNE A+ + N L +G VI Sbjct: 300 TGSQGENMAALSRIAASIHNKISIMPGDVVIFSSHPIPGNEKAVFKVINELEMKGAHVIF 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E HVSGH +LK +Y +P+ + +HGE HL H ELA + GI + + Sbjct: 360 E----DTHVSGHACREELKLIYALTKPKYAIPVHGEYRHLKRHAELAQEMGIPKENIKIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G +L + D +E+ +V DG +G ++ + R+ LS G L + V LD Sbjct: 416 TTGDVLEVSEDKLEVTGKVPAQGVFVDGLGVGDVGNIVLRDRQLLSQNGLLIIVVTLDKY 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 N+ P+IV G Y + + + V + + D ++ +I +L Sbjct: 476 SNNLIAGPDIVSRGF-VYVRESETLMEDCRAVVEEALEKCLRKNVTDWGKIKTTIKDSLS 534 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 535 EFLWKRTKRSPMILPIITEV 554 >gi|225016520|ref|ZP_03705712.1| hypothetical protein CLOSTMETH_00426 [Clostridium methylpentosum DSM 5476] gi|224950749|gb|EEG31958.1| hypothetical protein CLOSTMETH_00426 [Clostridium methylpentosum DSM 5476] Length = 640 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 292/555 (52%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +P+GG+ EIG NM G + +IDCG++FP D+ GVDLV PD T++ K Sbjct: 92 VRIIPIGGLNEIGKNMTCIECG----QDMFIIDCGMAFPDPDMLGVDLVLPDYTYVEKNI 147 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I ITH HEDH G + +VP+Y + AIGL+E K + + Sbjct: 148 DRLRGIVITHGHEDHIGGVPFFLKRFNVPIYGTRLAIGLIEGKLKEHGLLGRAKLNVVAP 207 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + +G ++E + VNHSIP+ + L + +P G +VHTGD+K+D + G + D Sbjct: 208 KQMIKMGCMAVEMIHVNHSIPDAVGLAVHTPAGVLVHTGDFKIDYSPVEGSMIDLAKFAE 267 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRIRSII 244 +G+ G+L LM DSTNA R G SE+ + ++ ++ A ++V +F+S++ RI+ II Sbjct: 268 LGSRGVLLLMSDSTNAERPGYTPSERTVGESFSNLFNQAGNRRIIVASFASNIHRIQQII 327 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ + G S++ VV+ AI++G + D L + YP E+LIV+ TGSQG Sbjct: 328 DNAVKYGRKVAVSGRSMENVVAKAIELGYLHMPDGLMIDINQINRYPHEKLIVVTTGSQG 387 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ G+ R V + +D +I S+ IPGNE + + N L+ G +VI E Sbjct: 388 EPLSALSRMASGDHRKVSVTCEDFIIISASPIPGNEKHVTKVINDLMRLGAKVIYEKM-Y 446 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 HVSGH ++LK + +RP+ + +HGE H+ H +LA+ GI + G++ Sbjct: 447 ETHVSGHACQDELKMILSLVRPKYFMPVHGEYKHMRKHADLAIAMGIQPSHINIGEIGQV 506 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 L + + I V G DG +G + + R+ LS G + V + + + I Sbjct: 507 LEIDNVDMHIAGTVPSGKVFVDGLGVGDVGSIVLRDRKVLSEDGLIVVVMTIENESGCIV 566 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G Y + + + ++ T+ + ++ ++ ++ L S + + Sbjct: 567 SGPDLVSRGF-VYVRESEALMDEAKRLLVRTLDQCHEQHIREWGAIKSAVKDELSSFIYR 625 Query: 541 VWGKKPLVTVFINKI 555 + P++ I +I Sbjct: 626 KTHRSPMILPIIMEI 640 >gi|73663010|ref|YP_301791.1| hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642266|sp|Q49WL3|RNJ1_STAS1 RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|72495525|dbj|BAE18846.1| putative hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 620 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 171/565 (30%), Positives = 284/565 (50%), Gaps = 13/565 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQIHKNEVAVYALGGLGEIGKNTYAVEY----QDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 ITYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 I + F + HSIPE +++ +P GNIVHTGD+K D + + Sbjct: 117 TELIEIDESSVIKSKHFEVSFYLTTHSIPEAYGVIVNTPEGNIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N G ++ TF+S++ Sbjct: 176 ANIAKMAKLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVEKIFRNCSGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKHNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYRAGAEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + +RP+ + IHGE L AH + ++ G+ V Sbjct: 356 IHNKV-SNIHTSGHGSKGDQQLMLRLLRPKFFLPIHGEYRMLKAHGQSGIECGVDPDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P+I+ G G I+ + + L Q + ++ SI Sbjct: 475 FKTNKLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVIGKLNQNQDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L + +KP++ I K++ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNED 559 >gi|239826452|ref|YP_002949076.1| beta-lactamase [Geobacillus sp. WCH70] gi|239806745|gb|ACS23810.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 555 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 287/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + ++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LSDHQVGVFALGGLGEIGKNT----YGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + + +FITH HEDH G + L +++P+Y A+GL+ K + ++ Sbjct: 60 LVKNAEKVKGLFITHGHEDHIGGIPYLLKQVNIPIYGGKLALGLIRNKLEEHGLLRQAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIREDDVIRFQKTAVTFFRTTHSIPDSYGVVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + ++I+DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKKGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVQGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + ++G IK F+ P ++ ++ T Sbjct: 239 QQVTEAAVMNNRKIAVFGRSMEAAIEIGQELGYIKCPKDTFVDANEINRLPANRVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PLN-DIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L L I+ ++ G DG +G ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGLSEKDARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKD 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + + + + + + + ++ IS L Sbjct: 478 FKIAAGPDIISRGF-VYMRESSDLINDAQTLITKHLEKVLERKTNQWSEIKNEISDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|229918679|ref|YP_002887325.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229470108|gb|ACQ71880.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 555 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 178/559 (31%), Positives = 284/559 (50%), Gaps = 13/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E + LGGVGEIG NM + +ID G+ FP D++ G+D+V PDIT++ Sbjct: 5 KTENISVFALGGVGEIGKNMYVVE----LDDDIFVIDAGLMFPGDEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + AIFITH HEDH G L + L VPVY + +GL+E K + K++ Sbjct: 61 KENKDRVRAIFITHGHEDHIGGLSYVLRDLKHVPVYGTKLTLGLIELKLKEAGLLKEVDL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A K+ + I RVNHSIP+ + + I++ G IVHTGD+K D + G +D Sbjct: 121 RMIDAKTKLTIADHFITFFRVNHSIPDCVGVCIQTSQGAIVHTGDFKFDYTPVDGKQSDF 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L AIG G+LAL+ DSTNA R G SE + + D++ A+G V+V +F+S+V R+ Sbjct: 181 NKLAAIGQRGVLALLSDSTNAERPGQTGSESIVGAELNDVIYQAEGRVIVASFASNVHRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + + AE RK+ ++G S+ +V VA + + K + + P +++++ T Sbjct: 241 QQVFAAAEANDRKVAVVGRSMVNIVEVAQKLNYLRFKAKTLVELSQVNRLPDNKVVILTT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++R + V + DTV+ ++ IPGNE ++ + L G VI Sbjct: 301 GSQGEPMAALTRMARNAHKQVNIRLNDTVVIAATPIPGNEKSVSKTIDLLFRSGANVIYN 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +LK M ++P+ + IHGE +AH +LA Q G+ + V Sbjct: 361 QR--KVHVSGHGSAEELKLMLNLVKPKYFLPIHGEYRMQMAHSKLAEQVGVKPNNIFIVE 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 G ++ + +V G L DG +G ++ + RR LS G + V L+ Sbjct: 419 KGDVVEFTGRKARMSRKVPAGNVLIDGIGVGDVGNIVLRDRRLLSQDGVVLCVVTLNRKQ 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + PE++ G Y + ++ + V + Q D L+ +I L Sbjct: 479 KKLISGPELISRGF-VYMRESEEMISEANRIVTKQIEKSLQAG-SDWTELKSNIRERLSV 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLFEQTKRRPMILPIIMEI 555 >gi|153940274|ref|YP_001391856.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|170754816|ref|YP_001782174.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|152936170|gb|ABS41668.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|169120028|gb|ACA43864.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|295319881|gb|ADG00259.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 569 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 183/550 (33%), Positives = 301/550 (54%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ EIG N+ Y ++IDCG+ FP DD+ G+D+V PDIT++ K + Sbjct: 26 PLGGLNEIGKNLTAIEY----KNDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVK 81 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IF+TH HEDH GAL + ++VPVY + +G++E K + + + + + Sbjct: 82 GIFLTHGHEDHIGALPYVLRVVNVPVYGTKLTLGIVETKLKEHGLLSSVELKCIKPREII 141 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + S+E +R +HSI +T+A+ I +P+G ++HTGD+K+D I G VTD IG Sbjct: 142 RLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKIDYTPIDGHVTDLARFAEIGKR 201 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G++A+M DSTN R G +SE + + +I KG ++V TF+S + RI+ II AE+ Sbjct: 202 GVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRIIVATFASHIHRIQQIIRAAEK 261 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ + G S++ ++ VA+ +G IK + +F+S ++ YP +Q+++I TGSQGEP SA Sbjct: 262 FKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAINKYPDDQVVIITTGSQGEPMSA 321 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++++ E + V + D VI S+ IPGNE + + N+L ++G VI E +HVS Sbjct: 322 LSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVINQLFKKGADVIYETL-ADIHVS 380 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH +LK M+ +RP+ + +HGE HL H ELA Q G+ V G ++ + Sbjct: 381 GHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQLGLPENHVMVSDIGDVIEVSR 440 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEI 485 + I VV G DG +G ++ + R+ LS G L+V V ++ ++ P+I Sbjct: 441 ECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGILTVVVTIEKVSGSVIAGPDI 500 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V + + + + ++ +I LR L + +K Sbjct: 501 ISRGF-VYVRESEDLMEEAKDLVKKALEECERNHITEWAAIKTNIKDVLRGFLYEKTKRK 559 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 560 PMILPIIMEI 569 >gi|323488849|ref|ZP_08094089.1| hypothetical protein GPDM_05876 [Planococcus donghaensis MPA1U2] gi|323397547|gb|EGA90353.1| hypothetical protein GPDM_05876 [Planococcus donghaensis MPA1U2] Length = 555 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 284/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+DDL G+D V PD T++ Sbjct: 5 KNDQTAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + +FITH HEDH G + L +++PVY A+GLL K + ++ Sbjct: 61 VKNVDKIKGLFITHGHEDHIGGIPYLLKKINIPVYGGKLALGLLRKKLEEHGLLRQTKMT 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + ++ HSIP+ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIGEDDIIKFRKTAVSFFSTTHSIPDAFGVVVKTPPGNIVHTGDFKFDFTPVG-EPANLL 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+L L+ DSTNA +SE+ + ++I DIM+ G ++ TF+S++ R++ Sbjct: 180 KMAQIGSEGVLCLLSDSTNAEVPDFTMSERKVGESIKDIMRKVDGRLIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D A GRKI + G S+ +++ ++G I + F+ ++ P +++++ TG Sbjct: 240 QVTDEAVAQGRKIAVFGRSMDNAMTIGRELGYINAPEDAFVDTQTLNRLPANEVLILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN ++ N L G VI Sbjct: 300 SQGEPMAALSRIASGTHRQIQIQPNDTVVFSSSPIPGNTSSVNRTINLLFRAGADVIHGS 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + I+P+ + IHGE L H LA++ + + N Sbjct: 360 LN-NIHTSGHGSEPENKLMLRLIKPKYFMPIHGEFRMLKTHAGLAVECDVPMENTFIMEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L L D I + G DG IG ++ + RR LS G + V V +D Sbjct: 419 GEVLALGQDEASIAGRIPSGDVYIDGSGIGDIGNIVLRDRRVLSEEGLVIVVVSVDMQKN 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + + D L+ IS L Sbjct: 479 KMVSGPDIISRGF-VYMRESGTMIYEAQQMLNRHLNKKIHSKNTDWAELKNDISDVLGPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 LYEKTKRRPMILPVIMEV 555 >gi|169826931|ref|YP_001697089.1| hypothetical protein Bsph_1351 [Lysinibacillus sphaericus C3-41] gi|168991419|gb|ACA38959.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 556 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 284/559 (50%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN++ LGG+GEIG N YG + I+ID G+ FP+DDL G+D V PD T++ Sbjct: 5 KNDQAAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH G + L ++VPVY A+GLL K + + I Sbjct: 61 VRNVDKIKGLFITHGHEDHIGGIPYLLRQVNVPVYGGKLALGLLRNKLEEHGLLRTTKLI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + D + S+ R HSIP+ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIKEEDVIKFRKTSVSFFRTTHSIPDAYGIVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG +G+L L+ DSTNA + +SE+ + K+I +I + ++ TF+S++ R++ Sbjct: 180 KMAEIGRDGVLCLLSDSTNAEKPNFTMSERTVGKSIDEIFRKVDSRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 D A + GRKI + G S+ +++ ++G I F+ +S P +++++ TG Sbjct: 240 QATDAAIKYGRKIAVFGRSMDNAITIGRELGYINAPKDTFIDAQSINRLPANEVMILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTVIFSS +PGN V++ I N L G VI Sbjct: 300 SQGEPMAALSRIANGTHRQIQIQPGDTVIFSSSPVPGNTVSVNKIINLLFRAGAEVIHGA 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H LA + + N Sbjct: 360 LN-NIHTSGHGSQEEQKLMLRLMKPKFFMPIHGEYRMLKMHTHLAEDCDVPLENTFVMEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L + + + G DG IG ++ + RR LS G + V V +D + Sbjct: 419 GDVLALSANEAHVAGRIPSGDVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSVDMENQ 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRR-KDLKLLRESISSALRS 536 I P+I+ G Y + G + K + + + Q + L+ I+ L Sbjct: 479 KIVSGPDIISRGF-VYMRESGTMINEAQKMLNRHLNETIQSKTPPQWTELKNEITDVLGP 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 538 YLFEKTKRRPMILPIIMEV 556 >gi|172057836|ref|YP_001814296.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171990357|gb|ACB61279.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 554 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 274/558 (49%), Gaps = 12/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ LGG GEIG NM + +ID G+ FP D++ G+D V PDI+++ Sbjct: 5 KTEKVSVFALGGAGEIGKNMYVVE----LDEDIFVIDAGLMFPGDEMLGIDKVIPDISYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + IFITH HEDH GAL + L VPVY + +GL+E K + KK Sbjct: 61 KENKERIQGIFITHGHEDHIGALSYVLRDLKVPVYGTRLTLGLIEIKLKEAGLLKKADLR 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A K+ V I RVNHSIP+ + + I++ G IVHTGD+K D + G D Sbjct: 121 PIDAKTKLTVAGHFITFFRVNHSIPDAVGVCIQTSQGAIVHTGDFKFDYTPVDGKQADFG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + AIG G+L L+ DSTNA R G SE + + D++ A G V+V +F+S+V R++ Sbjct: 181 KIAAIGQRGVLCLLSDSTNAERPGMSGSESTVGSELNDVIYEAPGRVIVASFASNVHRLQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 + AE RK+ ++G S+ +V VA + + K + + Q++++ TG Sbjct: 241 QVFAAAEANNRKVAVVGRSMVNIVEVAQRLNYLRFKQKTLVELSDINRLDDNQVVILTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++R + V + DTV+ ++ IPGNE ++ + L G VI Sbjct: 301 SQGEPMAALTRMARNAHKQVNIRLNDTVVVAASPIPGNEKSVSKTIDLLFRAGANVIYNQ 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH + DLK M I+P+ V IHGE AH LA G+ + + N Sbjct: 361 R--KVHVSGHGHAEDLKLMLNLIKPKFFVPIHGEFRMQKAHSRLAQTIGVNANNIFIIEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ + +V G L DG +G ++ + RR LS G + + + Sbjct: 419 GDVVEFEKRKARMSRKVNAGNVLIDGIGVGDVGNIVLRDRRLLSQDGVVLCVITISRKNK 478 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + + + V + D ++ I L S Sbjct: 479 TIVSGPEIISRGF-VYMRESEDMINEANRIVAKQLQ-GKLTGELDWTEMKSLIRDKLSSY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 LYEQTKRRPMILPIIMEI 554 >gi|197120332|ref|YP_002140759.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197089692|gb|ACH40963.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 558 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 184/554 (33%), Positives = 303/554 (54%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ LGG+GEIG+NMA + YG +++DCG+ FP+ + G+D+V PDI ++++ Sbjct: 11 LKFVALGGLGEIGLNMAAFEYG----DDIVIVDCGLMFPEPYMLGIDVVIPDIGYLIERA 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + AI +TH HEDH GAL + ++ P+Y + +G ++ K + +K+ + Sbjct: 67 DRIRAILLTHGHEDHIGALPYVLRDINPPIYGTALTLGFVKEKLKEFELDQKVDLRVVKP 126 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D V +G+F +E +RV HSI + AL + P G ++HTGD+KLD + G++TD + Sbjct: 127 RDTVQLGSFEVEFIRVAHSIVDGCALALSCPEGVVIHTGDFKLDQTPVDGELTDLATFSR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G +G+LAL DSTN REG +SE+ + +I G V+V FSS++ R++ ++ Sbjct: 187 YGEKGVLALFADSTNIEREGYTLSERLVGDAFEEIFPACAGRVIVAAFSSNIHRVQQVVR 246 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 AE+ GRK++L G S+ V +A ++G +K D + + + P+EQ+ +I TGSQGE Sbjct: 247 AAEKSGRKVLLNGRSMIGNVQIARELGYLKIPDDILIDLKELPRLPKEQVCMITTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 PRS+L +++ + + +KL DTVI SSR IPGNE I + N L +G VI E Sbjct: 307 PRSSLIRIAMDDHKQIKLERGDTVILSSRFIPGNEKTISDLMNHLYRRGAEVIHEKV-SE 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKML 422 VHVSGH +LK ++ ++P+ V +HGE HLV H +LA + NG ++ Sbjct: 366 VHVSGHASQEELKLLHNLVKPRFFVPVHGEYRHLVKHSQLAQKVGTPEERCILAVNGDVI 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFG 481 D I+D+V G DG +G ++ + R+ LS G + V + ++ I Sbjct: 426 LFAGDEACIVDQVSTGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVIIGINQTTGEIIY 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G ++ D + + K V+ T+ + D ++ + LR L K Sbjct: 486 GPDIVSRGF-VFEDDSQEYLEEAKKVVLDTLALVTPEVMTDWNEVKLEVRRVLRRLFNKT 544 Query: 542 WGKKPLVTVFINKI 555 ++P++ + ++ Sbjct: 545 LERRPVILPLVLEM 558 >gi|295399641|ref|ZP_06809622.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312111836|ref|YP_003990152.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294978044|gb|EFG53641.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311216937|gb|ADP75541.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y4.1MC1] Length = 555 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 289/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + ++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LNDHQVGVFALGGLGEIGKNT----YGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + + +FITH HEDH G + L +++P+Y A+GL+ K + ++ Sbjct: 60 LVKNAEKVKGLFITHGHEDHIGGIPYLLKQINIPIYGGKLALGLIRNKLEEHGLLRQAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIREDDVIRFRKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVQGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + ++G I+ F+ P ++ ++ T Sbjct: 239 QQVTEAAVMNNRKIAVFGRSMEAAIEIGQELGYIRCPKDTFVDANEINRLPANRVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PLN-DIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L L + I+ ++ G DG +G ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGLSENDARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKD 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + G + + + + + + ++ I+ L Sbjct: 478 FKIAAGPDIISRGF-VYMRESGDLISDAQALITKHLEKVLERKTNQWSEIKNEITDTLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYEKTKRRPMILPIIMEI 555 >gi|228921804|ref|ZP_04085119.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837809|gb|EEM83135.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 557 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 174/558 (31%), Positives = 283/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N++L LGGV EIG NM + Y S ++IDCG FP + L G+DL+ PD+T++ Sbjct: 5 NDKLSIFALGGVNEIGKNMYVIQY----SDDIVIIDCGSKFPDESLLGIDLIIPDVTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L+VP+YA+ +GL+ K ++ I Sbjct: 61 ENKDKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIGIKLKEHKLQDSTQLIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G ++ + NHSIP+ + + +P G +VHTGD+K D I D Sbjct: 121 IDSESLIEFGQINLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPINNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ G+LAL+ +STNA R G SE+ + + I + A V+++TF+S+V+R++ Sbjct: 181 MANIGSNGVLALLSESTNAERSGFTPSERLVGEKIEEAFVKAHSKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I+D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 IVDAALKTNRKLALLGRSMVNVVSVALEQGYLNIPEGMLIEANEINQMEPEKVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++LS G R V + DTVI S+ IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLSSGNYRQVDILPGDTVILSASPIPGNERNVSRIIDNLYLLGANVIYRSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H++LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHRQLAESVGVKKDNIYVIGN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQTAMQTRRITAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITLSKTEE 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+ + G Y D + + V+ TV L + +L+ I +L Sbjct: 481 KIISGPDTISRGF-VYVRDSEDFLNKINQLVVETVNRLQKAHINQWNVLKREIRESLGHF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYSHTKRKPMILPIIIEV 557 >gi|56419588|ref|YP_146906.1| hypothetical protein GK1053 [Geobacillus kaustophilus HTA426] gi|261419251|ref|YP_003252933.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|297530779|ref|YP_003672054.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. C56-T3] gi|319766067|ref|YP_004131568.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y412MC52] gi|56379430|dbj|BAD75338.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|261375708|gb|ACX78451.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|297254031|gb|ADI27477.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. C56-T3] gi|317110933|gb|ADU93425.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y412MC52] Length = 555 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 288/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 4 LTDQQVGVFALGGLGEIGKNT----YGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + +FITH HEDH G + L +++P+Y A+GL+ K + ++ Sbjct: 60 LVKHADKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + +G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVEGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + D+G IK F+ P ++ ++ T Sbjct: 239 QQVTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANRVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PLN-DIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L + I+ ++ G DG +G ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGISDKEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + G + + + + + + ++ I+ L Sbjct: 478 FKIAAGPDIISRGF-VYMRESGDLISEAQVLISKHLEKVLERKTNQWSEIKNEITETLAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYERTKRRPMILPIIMEI 555 >gi|290968393|ref|ZP_06559933.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] gi|290781580|gb|EFD94168.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] Length = 553 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 176/558 (31%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E+L+ +PLGG+GEIG NM + YG +++D G++FP DD+ G+DLV PDI+++ Sbjct: 3 KKEKLMIIPLGGLGEIGKNMTVIQYG----DDIVVVDAGLAFPDDDMFGIDLVIPDISYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R + A+ ITH HEDH G+L L + ++VPVYA+ GL+E K +S+ Sbjct: 59 IENRDKVRAVVITHGHEDHIGSLAYLLNEVNVPVYATKLVCGLIEGKLKENHISRYTL-H 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GD+V + + + + NHSIP+ AL ++PVG +VHTGDWK+D + G D Sbjct: 118 EVHHGDEVQIASMRVGFIHTNHSIPDASALYFKTPVGTVVHTGDWKMDLTPVDGRQMDIH 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G G+L LM DSTNA R G SE + + A+G +++ TF+S++SRI+ Sbjct: 178 KFAELGRRGVLLLMSDSTNAERPGYTESETTVGHAFRKAFREAEGRIILATFASNISRIQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ A Q RK+ +LG S+ V +A ++G ++ + + + Y +Q++++ TG Sbjct: 238 QAINTAAQFNRKVTVLGRSMVNNVQIATELGYLEVPQGMLIEPDELNRYSADQVLILTTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R V + DTVI S+ IPGNE + + L++ G +V+A Sbjct: 298 SQGEPMAGLSRMASNNHRTVTIMPGDTVIISATPIPGNETGVSRTIDNLLKLGAKVVAGR 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + +HVSGH +LK M + I+P+ + +HGE L H +LA+ G+ V N Sbjct: 358 -DKKIHVSGHASQEELKIMLELIKPKFFLPVHGEYRMLRLHGDLAVMMGVEPDHVLIGDN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G++ V G DG +G ++ I R+QL+ G + V + L Sbjct: 417 GQVFEFTGRSGRKAGRVNAGRVFVDGLGVGDVGNIVIRDRQQLAMEGMVVVVMTLAKGTC 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+IV G Y D + + + V + ++ ++ + L Sbjct: 477 HVVAGPDIVSRGF-VYVRDSEALMEEAHERVAAVLERCETGNIREWSTIKSQVRDTLSRY 535 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 536 LYEKTRRRPMILPIIMEV 553 >gi|196247804|ref|ZP_03146506.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|196212588|gb|EDY07345.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 555 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 288/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++++ LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 4 LTDQQVGVFALGGLGEIGKNT----YGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + + +FITH HEDH G + L +++P+Y A+GL+ K + ++ Sbjct: 60 LVKHAEKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + ++ R HSIP++ +V+++PVG IVHTGD+K D + + + Sbjct: 120 IEIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I+DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A RKI + G S++ + + D+G IK F+ P Q+ ++ T Sbjct: 239 QQVTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANQVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN V++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +LA+ G+ + Sbjct: 359 PLN-DIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L + I+ ++ G DG +G ++ + RR LS G + V V ++ Sbjct: 418 NGEVLGISDSEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + I P+I+ G Y + G + + + + + + ++ I+ + Sbjct: 478 FKIAAGPDIISRGF-VYMRESGDLISEAQALITKHLEKVLERKTNQWSEIKNEITETIAP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 537 FLYERTKRRPMILPIIMEI 555 >gi|330838447|ref|YP_004413027.1| Ribocuclease J [Selenomonas sputigena ATCC 35185] gi|329746211|gb|AEB99567.1| Ribocuclease J [Selenomonas sputigena ATCC 35185] Length = 570 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 185/555 (33%), Positives = 306/555 (55%), Gaps = 11/555 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+GEIG NM + +G ++ID G+ FP +D+ G+DLV PDIT++++ Sbjct: 22 KKLQVIPLGGLGEIGKNMTVLRFG----NDILVIDAGLMFPTEDMLGIDLVIPDITYLLE 77 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + I +TH HEDH GAL + + + VPVY +P +G+L+ + VS + Sbjct: 78 NRDCIKGIVLTHGHEDHIGALPYVLTQIDVPVYGTPLTLGILKGRLEERGVSTQNL-HPI 136 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AGD++ +G F+I+ VRVNHSIP+ +AL IR+P+G I HTGD+K+D + G +TD +L Sbjct: 137 MAGDQLRLGCFAIKFVRVNHSIPDAVALAIRTPLGTIFHTGDFKMDYTPVDGKLTDFKTL 196 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +L ++ DSTNA R SE + + + A+G ++V TFSS+VSRI+ I Sbjct: 197 SEIGNKSVLLMLADSTNAERTEPVPSEATVGVAFDRVFRRARGRIIVATFSSNVSRIQQI 256 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + RK+ +LG S+ V ++A+++G + + + + G Y Q+++ TGSQ Sbjct: 257 IDSAVRYRRKVAILGRSMVNVTNIAMELGYLTAPEGTIVDIDEIGRYNDNQIVIATTGSQ 316 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL +++ R V + DT+I S+ IPGNE +G + L++ G V+ +E Sbjct: 317 GEPMSALTRMAMSSHRKVNITPMDTIIISATPIPGNERYVGKTIDLLLKLGADVVYGRSE 376 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +HVSGH + LK M+ IRP+ + +HGE LV H +LA + NG Sbjct: 377 G-IHVSGHAGQDALKLMHNLIRPRYFMPVHGEYRMLVRHAKLAQSLGMPEENIFLNENGG 435 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 +L + ++ +V G+ L DG +G ++ + R+QLS G + V V ++ + Sbjct: 436 ILEFTRNTAKLNGKVQSGIVLIDGLGVGDVGNIVLRDRQQLSREGVIIVVVTINRSSGRM 495 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+ V G Y + ++ + V + + + ++ +I L + Sbjct: 496 VSGPDFVSRGF-VYVRESEELMDTARRRVFSALKKCEDEHITEWSSIKTTIRDVLGRFIF 554 Query: 540 KVWGKKPLVTVFINK 554 ++P++ I + Sbjct: 555 DATRRRPMILPIIME 569 >gi|331091333|ref|ZP_08340173.1| hypothetical protein HMPREF9477_00816 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404494|gb|EGG84038.1| hypothetical protein HMPREF9477_00816 [Lachnospiraceae bacterium 2_1_46FAA] Length = 555 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 177/560 (31%), Positives = 302/560 (53%), Gaps = 15/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L + LGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PDIT++ Sbjct: 5 NNSKLKIIALGGLEQIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GAL + L+ P+YA+ +G++E K + + Sbjct: 61 KDNIQKVKGFVITHGHEDHIGALSYVLKDLNFPIYATKLTMGIIENKLKEHNLLRSTRRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 121 VVRHGQSINLGQFRIEFIKTNHSIADASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +G +G+LALM DSTNA R G +SE+ + K I + +++ TF+S+V R+ Sbjct: 181 RFAELGKKGVLALMSDSTNAERPGFTMSERTVGKTFDHIFAEHRNTRIIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + RK+V+ G S+ ++ A ++G + D+ ++ + YP E+ ++I T Sbjct: 241 QQIINSAYKYDRKVVVEGRSMVNIIETASELGYLNIPDKTLITIDQLKNYPDEKTVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + DTVIFSS IPGNE A+ + N L ++G VI + Sbjct: 301 GSQGESMAALSRMAADIHKKVSIKPGDTVIFSSSPIPGNEKAVSRVINELSQKGATVIFQ 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K +Y ++P+ + +HGE HL A+ +A GI + ++ Sbjct: 361 ----DTHVSGHACQEEIKLIYSLVKPKYAIPVHGEYRHLRANAGIAESLGIPKENIFLLQ 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G +L L E++D+V G L DG +G ++ + R+ L+ G L V + L+ Sbjct: 417 SGDVLALDGKGAEVVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTLEKGT 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-PQFRRKDLKLLRESISSALR 535 + P+IV G Y + + + + + + + Q + D ++ I + Sbjct: 477 NQVLAGPDIVSRGF-VYVRESEGLMEEARQILSEALENCLMQNKNADWSRIKLVIRDTMN 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + K ++P++ I + Sbjct: 536 EFIWKRTKRRPMILPIIMDV 555 >gi|317497452|ref|ZP_07955772.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895238|gb|EFV17400.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 554 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 302/559 (54%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + +PLGG+G+IGMN+ + + + +++DCG++FP +D+ G+DLV PDIT++ Sbjct: 5 KPSSVKIIPLGGLGQIGMNITAFE----CNNQILIVDCGLAFPDEDMLGIDLVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH HEDH GA+ L+VP+YA+ + L+E K + + Sbjct: 61 KDNASKIRGLVITHGHEDHIGAIPYFEKELNVPIYATKLTMALIENKLKEHGILNNVERH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GDKV +G F++E ++ NHSI + AL I +P G IVHTGD+K+D + G+ D Sbjct: 121 VVTHGDKVKLGIFNVEFIKTNHSIADAAALAITTPAGVIVHTGDFKIDHTPLFGEAIDLA 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +G++G+LALM DSTN R+G SEK + K + ++ KG +++ TF+S+V R+ Sbjct: 181 RFAELGSKGVLALMADSTNVERQGYTPSEKNVGKRLDNLFAEHLKGRMIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIAT 299 + II+ A + GRK+ + G S+ +++ A ++G IK + L + YP +Q+++I T Sbjct: 241 QHIINSAHKYGRKVAVEGRSMVNIIATASELGYIKIPKNTLIETDQIKNYPDDQIVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + DT+IFSS IPGNE I I N L +G +++ E Sbjct: 301 GSQGETMAALSRMANSTHRKVSIVPSDTIIFSSSPIPGNEKNISKIMNELALKGAQIVFE 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +L+ +Y +P+ + +HGE HL+ H+ELA++ GI + Sbjct: 361 ----DTHVSGHACREELRLIYALTKPKYAIPVHGEYRHLMRHRELAIEMGIPKENAFVLA 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L L +I +V G L DG +G ++ + R+ LS G + V L H Sbjct: 417 EGDVLELNKRQGKIAGKVQAGGILVDGLGVGDVGNIVLNDRKLLSQNGLIIATVTLQKHG 476 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N I P+IV G Y + + + V + + D ++ I L + Sbjct: 477 NMILAGPDIVSRGF-VYVRESESLMEGARDVARDAVEECLERNITDWARIKTKIKDELSN 535 Query: 537 LLKKVWGKKPLVTVFINKI 555 + K + P++ I ++ Sbjct: 536 YIWKKTKRNPMILPIITEV 554 >gi|325262835|ref|ZP_08129571.1| metallo-beta-lactamase family protein [Clostridium sp. D5] gi|324031929|gb|EGB93208.1| metallo-beta-lactamase family protein [Clostridium sp. D5] Length = 556 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 175/560 (31%), Positives = 302/560 (53%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N +L +PLGG+ +IGMN+ + + I++DCG++FP+DD+ G+DLV PD+T++ Sbjct: 5 SNGKLRIIPLGGLEQIGMNITAFEF----EDSIIVVDCGLAFPEDDMLGIDLVIPDVTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ITH HEDH GAL + +++P+Y + +G++E K + + Sbjct: 61 KDNIDKVKGFVITHGHEDHIGALPYVLKEINLPIYTTKLTMGIIENKLKEHNLLRGTKRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GDV D Sbjct: 121 VVRHGQSINLGKFRIEFIKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDVIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 + IG +G+LALM DSTNA R+G SE+ + I + +++ TF+S+V R+ Sbjct: 181 RIAEIGKKGVLALMSDSTNAERKGFTQSERTVGITFDHIFAEHQNTRIIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+ A + GRK+++ G S+ ++S A ++G + D + + YP E++++I T Sbjct: 241 QQAINSAYKYGRKVIVEGRSMVNIISTASELGYLNIPDNTLIEIDQMKKYPPEKMVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ R V + DT+IFSS IPGNE ++ + N L +G VI + Sbjct: 301 GSQGESMAALSRMAADVHRKVTIQPNDTIIFSSNPIPGNEKSVSRVINELSAKGANVIFQ 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI + ++ Sbjct: 361 ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAAIASSLGIPKENIFIIQ 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G ++ L D +I+D+V G L DG +G ++ + R+ L+ G L V + L+ Sbjct: 417 SGDVMELCEDEAKIVDKVHTGAILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTLEKGT 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + + V + + D ++ +I + Sbjct: 477 NRLLAGPDIVSRGF-VYVRESEGLMEEARQVVTEGLERCLSNKHADWNKIKLAIRDTMND 535 Query: 537 LLKKVWGKKPLVTVFINKIS 556 + K ++P++ I + Sbjct: 536 YIWKKTKRRPMIIPIIMDVD 555 >gi|148266403|ref|YP_001233109.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146399903|gb|ABQ28536.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 558 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 187/554 (33%), Positives = 300/554 (54%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+NMA++ YG I+IDCG+ FP+ + G+D+V PDI++++ Sbjct: 11 LKIIPLGGLGEIGLNMAVFEYG----DDIIIIDCGLMFPEPYMLGIDIVIPDISYLLDRA 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + I +TH HEDH GAL + ++ P+Y + +G ++ K + K+ + Sbjct: 67 DKVRGICLTHGHEDHIGALPFVLREINPPIYGTALTLGFVKEKLKEYDLDSKVDLRVVKP 126 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D V +G FS+E +RV HSI + L IRSP G ++HTGD+KLD + G++TD + Sbjct: 127 RDIVSLGVFSVEFIRVAHSIVDGCGLAIRSPEGVVIHTGDFKLDQTPVDGELTDLATFSR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G G+LALM DSTN REG +SEK + +I V+V FSS++ R++ +++ Sbjct: 187 YGEAGVLALMADSTNVEREGYTLSEKLVGDAFDEIFPRCARRVIVAAFSSNIHRVQQVVE 246 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRK++L G S+ V +A ++G ++ D+L + + P+E++ +I TGSQGE Sbjct: 247 AAARSGRKVLLNGRSMIANVQIARELGYLRIPDELLIDLKELPRLPKEEICMITTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL +++ + + +KL E DTVI SSR IPGNE I + N L +G V E Sbjct: 307 PMSALTRIAMDDHKQIKLEEGDTVILSSRFIPGNEKTISDLINHLYRRGAEVYHEKV-SE 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKML 422 VHVSGH +LK ++ +RP+ + +HGE HLV H +LA + G+ NG ++ Sbjct: 366 VHVSGHASQEELKLLHNLVRPRYFIPVHGEYRHLVKHAQLAQKVGLAKERCILAVNGDVI 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFG 481 IID V G DG +G ++ + R+ LS G + V + ++ I Sbjct: 426 AFSDGEGCIIDRVETGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVIIGINQGTGEIIY 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G ++ + + K V+ T+ + D ++ + LR K Sbjct: 486 GPDIVSRGF-VFEDESQQYLDEAKKVVVDTLALVNTEVLADWSEVKLEVRRVLRRFFNKT 544 Query: 542 WGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 545 IERRPVILPLILEM 558 >gi|299144214|ref|ZP_07037294.1| metallo-beta-lactamase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518699|gb|EFI42438.1| metallo-beta-lactamase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 554 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 191/559 (34%), Positives = 313/559 (55%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L +PLGG+ E+G N+ L Y + I++DCG++FP+D++ G+D+V PD+T++ Sbjct: 3 NSNKLKIIPLGGMREVGKNLTLIEY----RDEIIIVDCGMTFPEDEMLGIDVVIPDVTYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K ++ + A+ +TH HEDH GA+ + L +P+Y +P IGLLE K + K+ Sbjct: 59 IKNQEKIKALVLTHGHEDHIGAIPYILKKLKMPIYGTPLTIGLLENKLKEHNLG-KVELN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGDKV +G +E + VNHSIP++ AL I++P+G + H+GD+K+D I GDV D Sbjct: 118 VVRAGDKVKLGKMEVEWISVNHSIPDSCALAIKTPLGYVYHSGDFKVDFTPISGDVIDLQ 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 + IG +G+LA++ +STN +REG +SE+ + + I A +++ TF+S+V RI Sbjct: 178 RIAQIGEKGVLAMIGESTNVLREGYTMSERKVGETFNRIFSQAGTNRIIIATFASNVHRI 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ GR++VL G S+ V+ A +G +K K + + Y ++L+VI T Sbjct: 238 QQIINSAEKYGRRVVLSGRSMINVMETAQRLGYLKLKKGTLIDIKDMHKYNDDELVVITT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ GE R + + D VI S+ IPGNE ++ + N+L+E GV VI E Sbjct: 298 GSQGEPMSALTRIAYGEHRKIAVTPNDIVILSATPIPGNETSVFKVINKLLELGVNVIYE 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +LK + IRP+ + HGE HL+ H E+A G+ + + Sbjct: 358 SLT-EIHVSGHACQEELKLILSLIRPKYFIPAHGEIRHLLKHAEVANSLGVSKENIFIMS 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG L + + + +V G L DG IG ++ + R+ LS G + V + + Sbjct: 417 NGNCLEISQKDAKFVGDVPSGNILVDGLGIGDVGNIVLRDRKHLSEDGLIVVVITMSKSE 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + V T+ + D L+ SI L+ Sbjct: 477 GKLVSGPDIISRGF-VYVRESEGLIEDVRNVVKGTLGRCDRKSITDWTSLKTSIREDLKG 535 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + P++ I +I Sbjct: 536 FLFAQTKRNPMILPIIMEI 554 >gi|312623049|ref|YP_004024662.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] gi|312203516|gb|ADQ46843.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] Length = 555 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 187/561 (33%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + ++ +PLGG+ EIG NM + + + ++IDCG++FP+D++ GVDLV PD Sbjct: 1 MKKKQEHKIRIIPLGGLNEIGKNMTVIE----VNDEIVVIDCGLAFPEDEMLGVDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K ++ + A+ +TH HEDH GA+ + L+VP+Y + +GL+E K + + Sbjct: 57 ISYLLKNKEKVKALILTHGHEDHIGAIPYVLRDLNVPIYGTRLTLGLVEIKLLEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 TVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 SIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPLNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ RP+ + +HGE HL+ H +LAL+ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLALELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNILVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 ATRDVISGPDIITRGF-IYIRESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|222528642|ref|YP_002572524.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455489|gb|ACM59751.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 555 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 186/561 (33%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + ++ +PLGG+ EIG NM + + + ++IDCG++FP+D++ GVDLV PD Sbjct: 1 MKKKQEHKIRIIPLGGLNEIGKNMTVIE----VNDEIVVIDCGLAFPEDEMLGVDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K ++ + A+ +TH HEDH GA+ + L+VP+Y + +GL+E K + + Sbjct: 57 ISYLLKNKEKVKALILTHGHEDHIGAIPYVLRDLNVPIYGTRLTLGLVEIKLLEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 TVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 SIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPLNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ RP+ + +HGE HL+ H +LA++ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLAMELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 ATRDVISGPDIITRGF-IYIRESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|302380734|ref|ZP_07269199.1| putative ribonuclease J 1 [Finegoldia magna ACS-171-V-Col3] gi|303234042|ref|ZP_07320691.1| putative ribonuclease J 1 [Finegoldia magna BVS033A4] gi|302311677|gb|EFK93693.1| putative ribonuclease J 1 [Finegoldia magna ACS-171-V-Col3] gi|302494967|gb|EFL54724.1| putative ribonuclease J 1 [Finegoldia magna BVS033A4] Length = 555 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 188/556 (33%), Positives = 301/556 (54%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+ EIG NM + Y I++DCG++FP +++ GVD+V PDI+++ K Sbjct: 7 DKLKVIPLGGLNEIGKNMTVVEY----KDDIIVVDCGMTFPDEEMLGVDIVIPDISYLEK 62 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ + I ITH HEDH GA+ + L VPVY + +GLLE K + ++S K Sbjct: 63 NKEKIRGIVITHGHEDHIGAIPYVLKKLDVPVYGTKLTMGLLENKILEHKLSLKSLHTV- 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +GAFS+E V+V HSIP++ +L I +PVG + TGD+K+D I + D + Sbjct: 122 DYRKPIKLGAFSVEFVKVCHSIPDSASLAITTPVGVLFFTGDFKIDYTPIDNNRMDFGRI 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +IGN+G+LAL DSTN R+G +SEK + K ++ +A ++V TF+S+V RI+ + Sbjct: 182 ASIGNKGVLALFADSTNVERQGYTLSEKSVGKTFINLFDDAPARIIVATFASNVHRIQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I AE +K+ L G S+ V+VA ++G IK D+ + + +++++ TGSQ Sbjct: 242 ISAAEHFNKKVALSGRSMINTVNVARELGYIKVGDKTIIDINDINKHKPNEIVLLTTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SA+ +++ G R V L DTVI S+ IPGN+ + + N+L+E GV+VI Sbjct: 302 GEPMSAMTRMANGTHRKVHLDPTDTVILSATPIPGNDNQVSSVINKLMEMGVKVIYSSL- 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M+ +RP+ V +HGE HL H LAL G+ + NG Sbjct: 361 ADVHVSGHACQEELKLMHSLVRPKFFVPLHGEMRHLKCHANLALDMGMKEKDIVIADNGN 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 + I ++D L DG +G ++ + RR LS G + V + LD + + Sbjct: 421 TIEFTRKSINLVDTKFASNILVDGLGVGDVGNVVLRDRRHLSEDGLIVVVITLDARNKEV 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + + + V + + D L+ +I L+ L Sbjct: 481 IAGPDIISRGF-VYVKENNDLMEECKSVVQNVLDECYTKNIYDWSTLKHNIRETLKKFLY 539 Query: 540 KVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 540 QEIKRNPMILPVIMEV 555 >gi|169824328|ref|YP_001691939.1| putative Zn-dependent hydrolase [Finegoldia magna ATCC 29328] gi|167831133|dbj|BAG08049.1| putative Zn-dependent hydrolase [Finegoldia magna ATCC 29328] Length = 555 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 187/556 (33%), Positives = 300/556 (53%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+ EIG NM + Y I++DCG++FP +++ GVD+V PDI+++ K Sbjct: 7 DKLKVIPLGGLNEIGKNMTVVEY----KDDIIVVDCGMTFPDEEMLGVDIVIPDISYLEK 62 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ + I ITH HEDH GA+ + L PVY + +GLLE K + ++S K Sbjct: 63 NKEKIRGIVITHGHEDHIGAIPYVLKKLDAPVYGTKLTMGLLENKILEHKLSLKSLHTV- 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +GAFS+E V+V HSIP++ +L I +PVG + TGD+K+D I + D + Sbjct: 122 DYRKPIKLGAFSVEFVKVCHSIPDSASLAITTPVGVLFFTGDFKIDYTPIDNNRMDFGRI 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +IGN+G+LAL DSTN R+G +SEK + K ++ +A ++V TF+S+V RI+ + Sbjct: 182 ASIGNKGVLALFADSTNVERQGYTLSEKSVGKTFINLFDDAPARIIVATFASNVHRIQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I AE +K+ L G S+ V+VA ++G IK D+ + + +++++ TGSQ Sbjct: 242 ISAAEHFNKKVALSGRSMINTVNVARELGYIKVGDKTIIDINDINKHKPNEIVLLTTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SA+ +++ G R V L DTVI S+ IPGN+ + + N+L+E GV+VI Sbjct: 302 GEPMSAMTRMANGTHRKVHLDPTDTVILSATPIPGNDNQVSSVINKLMEMGVKVIYSSL- 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M+ +RP+ V +HGE HL H LAL G+ + NG Sbjct: 361 ADVHVSGHACQEELKLMHSLVRPKFFVPLHGEMRHLKCHANLALDMGMKEKDIVIADNGN 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 + I ++D L DG +G ++ + RR LS G + V + LD + + Sbjct: 421 TIEFTRKSINLVDTKFASNILVDGLGVGDVGNVVLRDRRHLSEDGLIVVVITLDARNKEV 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + + + V + + D L+ +I L+ L Sbjct: 481 IAGPDIISRGF-VYVKENNDLMEECKSVVQNVLDECYTKNIYDWSTLKHNIRETLKKFLY 539 Query: 540 KVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 540 QEIKRNPMILPVIMEV 555 >gi|229075128|ref|ZP_04208122.1| Zn-dependent hydrolase [Bacillus cereus Rock4-18] gi|228707905|gb|EEL60084.1| Zn-dependent hydrolase [Bacillus cereus Rock4-18] Length = 557 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 174/558 (31%), Positives = 281/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 NE+L LGGV EIG NM + Y S ++IDCG FP + L G+DL+ PDIT++ Sbjct: 5 NEKLSIFALGGVNEIGKNMYVIQY----SNDIVIIDCGSKFPDESLLGIDLIIPDITYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L+VP+YA+ +GL+ K ++ Sbjct: 61 ENKDKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIGIKLKEHKLQDSTQLTI 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G ++ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDSESLIEFGQINLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ G+LAL+ +STNA R G SE+ + I + A V+++TF+S+V+R++ Sbjct: 181 MANIGSNGVLALLSESTNAERSGFTPSERLVGGKIEEAFIKAHRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I+D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 IVDAALKTNRKLALLGRSMVNVVSVALEQGYLNIPEGMLIEANEINQLEPEKVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + DTVI S+ IPGNE + I + L G VI Sbjct: 301 QGEPMAALARLASGNYRQVDILPGDTVILSASPIPGNERNVSRIIDNLFLLGANVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H++LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHRQLAESVGVKKDNIYVIGN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQTAMQTRRIPAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITLSKTEE 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+ + G Y D K + + V+ T+ L + +L+ I L Sbjct: 481 KIISGPDTISRGF-VYVRDSEDFLKKINQLVVETINKLQKAHIYQWNVLKREIRETLGHF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYSHTKRKPMILPIIIEV 557 >gi|224476203|ref|YP_002633809.1| putative metallo-beta-lactamase superfamily hydrolase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420810|emb|CAL27624.1| putative hydrolase of the metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] Length = 650 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 174/562 (30%), Positives = 288/562 (51%), Gaps = 10/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD ++ Sbjct: 4 LKNNEVGVYALGGLGEVGKNTYAVEY----KDEIVLIDAGIKFPDDNLLGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 60 LVQNKDKIIGLFITHGHEDHIGGVPFLLKELNIPIYGGPLALGLIRNKLEEHHLLRTAEL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++ F+I HSIPE +V+ +P G IVHTGD+K D + + + Sbjct: 120 NEINEDTEINSKYFNISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGT-LANI 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA+ +SE+ + +N+ I + G ++ TF+S++ R+ Sbjct: 179 AKMAKIGEEGVLCLLSDSTNALVPNFTLSEREVGQNVDKIFRKCTGRIIFATFASNIYRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ A + RKIV+ G S++ + + +++G IK + F+ P+ +L+++ T Sbjct: 239 QQAVEAAVKYNRKIVVFGRSMENNIKIGMELGYIKAPPETFIEPNKINSVPKHELLILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYRAGADVIHS 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH D + M + IRP+ + IHGE L AH + +Q G+ V Sbjct: 359 KI-SNIHTSGHGSQGDQQLMLRLIRPKFFMPIHGEYRMLKAHSQTGVQCGVEEDNVFIFD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + G L DG IG ++ I R+ LS G + V V +D N Sbjct: 418 NGDVLALTRDSARKAGRIPSGDVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNT 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G G I+ K + L Q + ++ SI L+ Sbjct: 478 NTLLSGPDIISRGFVYMRESGHLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + +KP++ I K++ Sbjct: 538 YLYEKTARKPMILPVIMKVNED 559 >gi|228474445|ref|ZP_04059180.1| ribonuclease J 1 [Staphylococcus hominis SK119] gi|314936721|ref|ZP_07844068.1| ribonuclease J 1 (RNase J1) [Staphylococcus hominis subsp. hominis C80] gi|228271804|gb|EEK13151.1| ribonuclease J 1 [Staphylococcus hominis SK119] gi|313655340|gb|EFS19085.1| ribonuclease J 1 (RNase J1) [Staphylococcus hominis subsp. hominis C80] Length = 559 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 171/565 (30%), Positives = 281/565 (49%), Gaps = 13/565 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHNLLRN 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +V+ +P G IVHTGD+K D + Sbjct: 117 ASLNEITEDSVIKSKHFEISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGA-P 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH + + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGIDCGVKEENVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNSNDDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L + ++P++ I K++ + Sbjct: 535 LQPYLYEKTARRPMILPVIMKVNEE 559 >gi|226324643|ref|ZP_03800161.1| hypothetical protein COPCOM_02428 [Coprococcus comes ATCC 27758] gi|225207091|gb|EEG89445.1| hypothetical protein COPCOM_02428 [Coprococcus comes ATCC 27758] Length = 556 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 182/553 (32%), Positives = 300/553 (54%), Gaps = 14/553 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +PLGG+ +IGMN+ + Y I++DCG+SFP+DD+ G+DLV PDI+++ Sbjct: 13 IIPLGGLEKIGMNITAFEY----EDSIIVVDCGLSFPEDDMLGIDLVIPDISYLKSNADK 68 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + ITH HEDH GAL + +++P+Y + +G++E K + + + G Sbjct: 69 VKGFVITHGHEDHIGALPYVLKEINLPIYTTKLTMGIIEKKLTEHNLLRSTKRKVVRHGQ 128 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D IG Sbjct: 129 SINLGKFRIEFIKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQRFAEIG 188 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRSIIDI 246 +G+LALM DSTNA R G SE+ + + +++ ++V TF+S+V R++ II+ Sbjct: 189 KKGVLALMSDSTNAERPGFTQSERTVGATFDRLFAEHSNTRIIVATFASNVDRVQQIINT 248 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATGSQGEP 305 + + GRK+V+ G S+ ++SVA ++G + + L + YPRE+ +I TGSQGE Sbjct: 249 SYKYGRKVVVEGRSMVNIISVASELGYLNVPENTLIETDQLKNYPREKTTIITTGSQGES 308 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ + + + DT+I SS IPGNE A+ +I N L E+G VI + Sbjct: 309 MAALSRMAADIHKKISIMPGDTIILSSNPIPGNEKAVSNIINELSEKGANVIFQ----DT 364 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI + +++G +L Sbjct: 365 HVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGIAKSLGIPKNNIFILKSGDVLA 424 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGV 482 L + E++D+V G L DG +G ++ + R+ L+ G L V + L+ N + Sbjct: 425 LDDESAEVLDKVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTLEKRTNQLLAG 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P+IV G Y + + + K V V R D ++ I + + K Sbjct: 485 PDIVSRGF-VYVRESESLMEEARKVVTEAVEKCLMSRHADWSKIKLVIRDTMNDFIWKRT 543 Query: 543 GKKPLVTVFINKI 555 +KP++ I + Sbjct: 544 KRKPMILPIIMDV 556 >gi|239627759|ref|ZP_04670790.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239517905|gb|EEQ57771.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 567 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 301/558 (53%), Gaps = 14/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ +IGMN+ + Y I++DCG++FP DD+ G+DLV PD++++ Sbjct: 19 KGKLKIIPLGGLEQIGMNITAFEY----EDSIIIVDCGLAFPGDDMLGIDLVIPDVSYLK 74 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + ITH HEDH GAL + ++VPVY + I L+E K R+ K Sbjct: 75 QNIDKVKGFVITHGHEDHIGALPYILQQINVPVYGTKLTIALIEHKLEEHRLMKNTKRKV 134 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G V++G F +E ++ NHSI + AL I SPVG ++HTGD+K+D + GD D Sbjct: 135 VKHGQSVNLGCFRVEFIKTNHSIQDASALAIFSPVGIVLHTGDFKIDYTPVFGDPIDLQR 194 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRIR 241 +G +G+LAL+ DSTNA R G +SE+ + K +I K ++V TF+S+V R++ Sbjct: 195 FAELGKKGVLALLADSTNATRPGFTMSERTVGKTFDNIFSEHKNQRIIVATFASNVDRVQ 254 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A + GRK+V+ G S+ V+ +A +G I + + E YP E ++I TG Sbjct: 255 QVVNTAYKYGRKVVVEGRSMVTVMDIASKLGYINVPEGTLIDIEHLRNYPPESTVLITTG 314 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ G + V + +D V+ SS IPGNE A+ ++ N L +G ++I Sbjct: 315 SQGESMAALSRMASGIHKKVSITPRDVVVLSSTPIPGNEKAVSNVVNELSMKGAKII--- 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 HVSGH DLK +Y I P+ + +HGE H +A KELA G+ V + Sbjct: 372 -NQDTHVSGHACQEDLKLIYSLIHPKFAIPVHGEYRHRIAQKELAEFMGVDKDNAVLVNS 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ L + E+ID V G L DG +G ++ + R+ L+ G + V + L+ H N Sbjct: 431 GDVVALDGETCEVIDHVTCGGILVDGLGVGDVGNIVLRDRQNLAQNGIIVVVLTLEKHSN 490 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y + + + V+ V D R D ++ I +L Sbjct: 491 QLLAGPDIVSRGF-VYVRESEDLLEEAHSVVVNAVDDCMGRRVNDWGKIKNIIKDSLSDF 549 Query: 538 LKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 550 LWKRMKRNPVILPIIMEV 567 >gi|159184692|ref|NP_354295.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] gi|159139982|gb|AAK87080.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] Length = 555 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 320/554 (57%), Positives = 423/554 (76%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVF+PLGGVGEIGMN+ALYGYG S R+WIM+DCGV+F DLPGVDLV PDI++I Sbjct: 3 KQDELVFVPLGGVGEIGMNLALYGYGPESKRQWIMVDCGVTFAGPDLPGVDLVLPDISYI 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +++KNL I ITHAHEDHYGA++DLW L+VPVYASPF G+LEAKR YE +IP Sbjct: 63 AEQKKNLKGIIITHAHEDHYGAMNDLWPGLNVPVYASPFTAGMLEAKRAYEGTRAEIPVT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AGD+++VG F IE+V VNHSIPE M+L+IR+P+GN++HTGDWK+D+ LG +TD+ Sbjct: 123 IFKAGDRINVGPFEIEAVGVNHSIPEPMSLIIRTPLGNVIHTGDWKIDEAPSLGPLTDEA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG EG+LALMCDSTNA+R+G SE + + + I+++A+G V VTTFSS+V RIR Sbjct: 183 RFRAIGEEGVLALMCDSTNALRDGVSPSEHEVSEGLRQIIESAEGRVAVTTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE GR+++LLGSSLKRVV+V+ D+GI++ + FL+++ +G PR++++VI TGS Sbjct: 243 SIAQAAEAAGREVLLLGSSLKRVVNVSQDLGIMEGIKPFLAEDEYGYIPRDRVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EMRNV LA DTV+FSSRAIPGNE AI IKN L+EQGV ++ ++ Sbjct: 303 QGEPRAALAKLSRDEMRNVALASGDTVVFSSRAIPGNEKAIIEIKNGLIEQGVHIVTDN- 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP N+L RMY+W +PQ+LV +HGE HLVA KELA Q GI+ VP VRNG + Sbjct: 362 EALVHVSGHPRRNELLRMYEWTKPQILVPVHGEAAHLVAQKELAEQAGISQVPKVRNGNV 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E+I++V HG KDG L+G ++GI+ RR+LSF GH++VNV+LD+ Y+ G Sbjct: 422 LRLAPGPAEVINDVPHGRVFKDGNLVGDMDEMGISNRRKLSFAGHVAVNVVLDSRYDFLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P +D + + L V+ V +P+ RRKDL LLRES+ A+R+ + Sbjct: 482 DPDVVPFGLPEFDDEDEAMEDTLYDAVLGAVESIPRARRKDLALLRESVRRAVRAAANQS 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ K+ Sbjct: 542 WGKKPIVTVFVTKV 555 >gi|225028521|ref|ZP_03717713.1| hypothetical protein EUBHAL_02800 [Eubacterium hallii DSM 3353] gi|224954164|gb|EEG35373.1| hypothetical protein EUBHAL_02800 [Eubacterium hallii DSM 3353] Length = 554 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 304/563 (53%), Gaps = 17/563 (3%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK N+ + +PLGG+ +IGMN+ + Y I++DCG++FP D++ G+DLV PD Sbjct: 1 MKVTGNQSVKIIPLGGLEQIGMNITAFEY----EDSIIVVDCGLAFPDDEMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++ + + + ITH HEDH GA+ L++P+YA+ +GL+E K + + Sbjct: 57 ITYLKENASKVKGLVITHGHEDHIGAIPYALKELNMPIYATKLTMGLIENKLKEHNLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE ++ NHSI + AL I +P G IVHTGD+K+D + GD Sbjct: 117 TRRKVIKHGQSINLGRFRIEFIKTNHSISDAAALAIYTPAGIIVHTGDFKIDYTPVFGDA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSS 236 D +G +G+LALMC+STN REG SE+ + + + + +N ++V TF+S+ Sbjct: 177 IDLGRFAELGKKGVLALMCESTNVEREGYTPSERTVGRTLRHLFDENKDHRIIVATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ IID A G+K+V+ G S+ +S A ++G IK D + E Y EQL+ Sbjct: 237 VDRVQQIIDCAYSCGKKVVIEGRSMVSTISTAAELGYIKIPDNTLIDIEQMKNYVDEQLV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ R V + D +IFSS IPGNE A+ + N L ++G Sbjct: 297 LITTGSQGETMAALSRMAASTHRKVSIKPGDVIIFSSHPIPGNEKAVSKVMNELAKKGAS 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI + HVSGH ++K +Y +PQ + +HGE HL HK+LA++ GI V Sbjct: 357 VIFQ----DTHVSGHACQEEIKLIYTLTKPQYAIPVHGEYRHLKRHKDLAIEMGIPKENV 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +++G +L + + ++ V L DG +G ++ + R+ LS G V V L Sbjct: 413 MILQSGDVLTISKEQAKVTGHVPAQGILVDGLGVGDVGNIVLRDRQHLSQNGLFIVVVTL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 D + + P+IV G Y + K+ + V T+ + D ++ +I Sbjct: 473 DRYNGVLLAGPDIVSRGF-VYVRESEKLMEEAKSVVTNTLEHCNSKKITDWGRIKGAIRD 531 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 L + K + P++ I ++ Sbjct: 532 DLGDYIWKKMKRSPMILPIIMEV 554 >gi|313901852|ref|ZP_07835273.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter subterraneus DSM 13965] gi|313467895|gb|EFR63388.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter subterraneus DSM 13965] Length = 546 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 177/551 (32%), Positives = 304/551 (55%), Gaps = 10/551 (1%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLGG+GEIG NM + + + I+ID G++FP DD+PGVD+V PD T++++ R+ L Sbjct: 2 VPLGGLGEIGKNMMVLE----TEQDLIVIDAGLAFPGDDMPGVDVVIPDYTYLIERRQKL 57 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 IF+TH HEDH G + L + P+YA+ +GL+E K ++ + + + G++ Sbjct: 58 RGIFLTHGHEDHIGGIPYLLKEIQAPIYATRLTLGLVERKLEEDKRALPPRSRAIRPGER 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V GAF++E VNHSIP+++ IR+PVG +HTGD+K D I G V D L A G Sbjct: 118 VKAGAFTVEPFLVNHSIPDSVGFAIRTPVGLFIHTGDFKFDQTPIDGRVADYQRLAAYGA 177 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 EG+ LM DSTNA R G SE+ + + + ++ + A+G +L+ +F+S + R++ + D+A Sbjct: 178 EGVHVLMMDSTNAERPGVTGSERQVGEALANVFRQARGRILIASFASHLHRLQQVFDLAA 237 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATGSQGEPRS 307 Q R++ ++G S++ V VA+ +G ++ L+ G E+++V+ TGSQGEP S Sbjct: 238 QFKRRLAVIGRSMENAVEVAMKLGYLRDTGGVLTPAEKIGELAPERVVVLMTGSQGEPLS 297 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 ALA+ + GE+R ++L DTV+ ++ IPGNE + + L +G +V+ VHV Sbjct: 298 ALARAATGELRKLELIPGDTVVIAANPIPGNEKLVQRTVDNLFRRGCQVVYG-PHAGVHV 356 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLF 425 SGH +L+ M RP+ + +HGE HL+ + ELA GI + NG + + Sbjct: 357 SGHGSREELRLMLNLTRPRFFIPVHGEYRHLLHNAELARSVGIPDNHILIGENGSVFEVT 416 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPE 484 + +V G + DG +G ++ + RRQL+ G L V ++L + P+ Sbjct: 417 ASTARVRGKVAAGAVMVDGLGVGDVGNVVLRDRRQLAQDGVLIVAMVLSREQRKVVSGPD 476 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 ++ G Y + + + + + + + + ++ ++ AL L + G+ Sbjct: 477 LITRGF-VYMRESEDLLSEARERAVKALNGIDEQDITEWSTIKAAVRDALGKFLYERTGR 535 Query: 545 KPLVTVFINKI 555 +P++ + ++ Sbjct: 536 RPVILPIVLEV 546 >gi|229162009|ref|ZP_04289984.1| Zn-dependent hydrolase [Bacillus cereus R309803] gi|228621456|gb|EEK78307.1| Zn-dependent hydrolase [Bacillus cereus R309803] Length = 557 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 282/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N++L LGGV EIG N+ + Y S ++IDCG FP + L G+DL+ PDIT++ Sbjct: 5 NDKLSIFALGGVNEIGKNLYVLQY----SNDIVIIDCGSKFPDESLLGIDLIIPDITYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L+VP+YA+ +GL+ K ++ I Sbjct: 61 ENKDKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLINIKLKEHKLQDSTELIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G ++ + NHSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDSESLIEFGQINLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +IG+ G+LAL+ +STNA R G SE+ + I + A V+++TF+S+V+R++ Sbjct: 181 MASIGSNGVLALLSESTNAERSGFTPSERIVGDKIEEAFMKAHRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 IVNAALKTNRKLALLGRSMVNVVSVALEEGYLNIPEGMLIEANEINQMDPEKVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++L+ G R V + DTVI S+ IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLATGSYRQVDILPGDTVILSATPIPGNERNVSRIIDNLFLLGANVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H++LA GI + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHRQLAESVGIEKDNIYVINN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQNANQTRRIPAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITLSKTEE 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+ + G Y D K + K + T+ L + +L+ I L Sbjct: 481 KIISGPDTISRGF-VYVRDSEDFLKKINKLTVATINKLQKAHVYQWNVLKREIRETLGHF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYSHTKRKPMILPIIIEV 557 >gi|297588305|ref|ZP_06946948.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] gi|297573678|gb|EFH92399.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] Length = 555 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 187/556 (33%), Positives = 298/556 (53%), Gaps = 11/556 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+ EIG NM + Y I++DCG++FP +++ GVD+V PDI+++ K Sbjct: 7 DKLKVIPLGGLNEIGKNMTVIEY----KDDIIVVDCGMTFPDEEMLGVDIVIPDISYLEK 62 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ + I ITH HEDH GA+ + L VPVY + +GLLE K + ++S K Sbjct: 63 NKEKIRGIVITHGHEDHIGAIPYVLKKLDVPVYGTKLTMGLLENKILEHKLSLKSLHTV- 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +GAFS+E V+V HSIP+ +L I +PVG + TGD+K+D I + D + Sbjct: 122 DYKKSIKLGAFSVEFVKVCHSIPDAASLSITTPVGVLFFTGDFKIDYTPIDNNRMDFGRI 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIGN+G+LAL DSTN R+G +SEK + K ++ +A ++V TF+S+V RI+ + Sbjct: 182 AAIGNKGVLALFADSTNVERQGYTLSEKSVGKTFINLFDDAPARIIVATFASNVHRIQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I AE +++ L G S+ V+VA ++G IK ++ + Y +++++ TGSQ Sbjct: 242 ISAAEHFNKRVALSGRSMINTVNVARELGYIKVNEKTIIDINDINRYRPNEIVLLTTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SA+ +++ G R V L DTVI S+ IPGN+ + + N+L+E GV+VI Sbjct: 302 GEPMSAMTRMANGTHRKVHLDPTDTVILSATPIPGNDNQVSSVINKLMEMGVKVIYSSL- 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 VHVSGH +LK M+ +RP+ V +HGE HL H LAL + NG Sbjct: 361 ADVHVSGHACQEELKLMHSLVRPKFFVPLHGEMRHLKCHANLALDLGMKEKDIVIADNGN 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 + I ++D L DG +G ++ + RR LS G + V + LD + + Sbjct: 421 TIEFTRKSINLVDTKFASNILVDGLGVGDVGNVVLRDRRHLSEDGLIVVVITLDARNKEV 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y + + + V + + D L+ +I L+ L Sbjct: 481 IAGPDIISRGF-VYVKENNDLMEDCKSVVQKVLDECYTKNIYDWSTLKHNIRETLKKFLY 539 Query: 540 KVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 540 QEIKRNPMILPVIMEV 555 >gi|323483775|ref|ZP_08089155.1| hypothetical protein HMPREF9474_00904 [Clostridium symbiosum WAL-14163] gi|323692748|ref|ZP_08106976.1| beta-lactamase domain-containing protein [Clostridium symbiosum WAL-14673] gi|323402966|gb|EGA95284.1| hypothetical protein HMPREF9474_00904 [Clostridium symbiosum WAL-14163] gi|323503190|gb|EGB19024.1| beta-lactamase domain-containing protein [Clostridium symbiosum WAL-14673] Length = 555 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 190/559 (33%), Positives = 297/559 (53%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ ++ +PLGG+ +IGMNM + Y I++DCG++FP DD+ G+DLV PD+T++ Sbjct: 6 KHNKVKIIPLGGLEQIGMNMTAFEY----EDSIIVVDCGLAFPSDDMLGIDLVIPDVTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ITH HEDH GAL + + PVY + IGL++ K ++K I Sbjct: 62 KNNISKVKGFVITHGHEDHIGALPYVLKDIPAPVYGTKLTIGLIDNKLKEHNMTKTIKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE V+ NHSI + AL I +P G I+HTGD+K+D + G+ D Sbjct: 122 VVKHGQSINLGCFRIEFVKTNHSIADASALAIFTPAGIILHTGDFKIDYTPVFGEPADLQ 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRI 240 +G +G+LALMCDSTNA+R G +SE+ + + I K +LV TF+S+V R+ Sbjct: 182 RFAELGKKGVLALMCDSTNAIRPGFTMSERTVGRTFDSIFAEHKNNRILVATFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + GRK+V+ G S+ V+ A ++G I + + E Y +E ++I T Sbjct: 242 QQIINSAYKYGRKVVVEGRSMVNVIGTASELGYINIPEGTLIDIEHLKNYKKEDTVLITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + D VI SS IPGNE A+ + N L +G VI + Sbjct: 302 GSQGESMAALSRMAASLHKKVSIMPGDVVILSSTPIPGNEKAVSKVINELSMKGAEVIFQ 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K MY IRP+ + +HGE HL+A K LA GI V + Sbjct: 362 ----DTHVSGHACQEEIKLMYSLIRPKYAIPVHGEYRHLMAQKGLAESMGIPKENVIIMS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G ++ + + +I D V G L DG IG ++ + R+ L+ G + V + L+ Sbjct: 418 SGDVVEIGDEGYKIADHVQAGGILVDGLGIGDVGNIVLRDRQNLAQNGIIIVVLTLEKYS 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + K V V D + D ++ I +L Sbjct: 478 NQLMAGPDIVSRGF-VYVRESEDLMDEAQKIVDAAVQDCLRRHVSDWGKIKNIIRDSLSD 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 537 FLWKKMKRNPMILPIIMEV 555 >gi|154482588|ref|ZP_02025036.1| hypothetical protein EUBVEN_00255 [Eubacterium ventriosum ATCC 27560] gi|149736613|gb|EDM52499.1| hypothetical protein EUBVEN_00255 [Eubacterium ventriosum ATCC 27560] Length = 553 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 185/558 (33%), Positives = 307/558 (55%), Gaps = 14/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +PLGG+ +IGMNM + Y + I++DCG+SFP D++ G+D V PDITF++ Sbjct: 4 SSRIKVIPLGGLEQIGMNMTAFEY----NNGIIVVDCGLSFPDDEMLGIDCVIPDITFLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ITH HEDH GAL + ++VP+YA+ +G++E K + + Sbjct: 60 ENKDKVKGFVITHGHEDHIGALPYVLKEINVPIYATKLTMGIIEGKLSEHDLLSVVKRKV 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G + +G F IE +R NHSI + AL I +PVG IVHTGD+K+D + GD + Sbjct: 120 VKFGQSIHLGDFRIEFIRTNHSIADAAALAIHTPVGVIVHTGDFKVDYTPVFGDAINLCR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRIR 241 +G +G+LALMCDSTN +R G SE+ + K I +N K +++ TF+S+V R++ Sbjct: 180 FSELGKKGVLALMCDSTNVLRPGFTPSERKVGKTFDHIFSENTKSRIIIATFASNVDRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A + RK+++ G S+ ++SVA ++ +K D +S E Y +QL++I TG Sbjct: 240 QIINTACKYNRKVIVEGRSMVNIISVAREMDYLKIPDNTLISIEEMKNYTDDQLVLITTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ R V++ DT++FSS IPGNE A+ + N L +G VI Sbjct: 300 SQGESMAALSRMAASIHRKVQIKPGDTIVFSSTPIPGNEKAVSKVINELYMKGANVIFN- 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 HVSGH ++K MY I+P+ + +HGE HL+ H +LA GI V + + Sbjct: 359 ---ETHVSGHACQEEIKLMYSLIKPKYSIPVHGEYRHLMEHGKLAQSMGIPKKNVFLMES 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G +L + + +++ +V G L DG +G ++ + R+ L+ G + V + L+ + N Sbjct: 416 GDVLSIGKEDAKVVGKVPAGSVLVDGLGVGDVGNIVLRDRQNLAENGIIIVVLTLEKYTN 475 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + + + V + + R D ++ + +L Sbjct: 476 QILAGPDIVTRGF-VYVRESENLIENAKVVVTEALEECLSRRNADWGKIKMVVKDSLGEY 534 Query: 538 LKKVWGKKPLVTVFINKI 555 + K + P++ I ++ Sbjct: 535 IWKTMKRNPMILPIIMEV 552 >gi|315924758|ref|ZP_07920975.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621657|gb|EFV01621.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] Length = 599 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 177/557 (31%), Positives = 301/557 (54%), Gaps = 10/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++L +P+GG+GEIG NM + YG + I++DCG+ FP DD+ G+D V PD +++ Sbjct: 50 REKKLRIIPVGGLGEIGKNMTAFQYG----DEIIIVDCGLKFPDDDMYGIDTVLPDYSYL 105 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + A+ ITH HEDH G + ++ P+YA+ +GL++ K R+ K Sbjct: 106 EKNADKVKALVITHGHEDHIGGIPYFLKRVNAPIYATKLTVGLIDHKLEEHRLISKTKRH 165 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 AG +V +G F +E + VNHSI +++AL I++P + HTGD+K+D + GD+ D Sbjct: 166 IISAGSEVTIGDFRVEFIHVNHSIADSVALCIKTPAATVFHTGDFKIDFHPVDGDIIDLQ 225 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + A+GN G+ L+CDSTN G SE I K +++ + K ++VTTF+S+V RI+ Sbjct: 226 RIAALGNRGVDLLLCDSTNVEESGYAGSESDIGKTFFNLFRGNKNRIIVTTFASNVHRIQ 285 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I+ A RK+++ G S++ + SVA D+G + + + + Y QL+VI TG Sbjct: 286 QVINTAAYYNRKVIINGRSMETMTSVASDLGYLDVPKDVVIDIKDMKKYKPSQLVVITTG 345 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++ G R +++ + DT+I S+ +PGNE + I N+LV+ G VI Sbjct: 346 SQGEPMAALGRMANGNHRFLQIDKNDTIIISASPVPGNEKMVAEIMNKLVDLGAEVIYNK 405 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH +LK ++ ++P+ + +HGE L H +LA G+ + +N Sbjct: 406 F-AYIHTSGHAKCEELKIIHTLVKPRFFMPVHGEARMLKRHAKLAESLGMDPKNIRIQQN 464 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ L + +DE+ L DG +G ++ + R++LS G V + + Sbjct: 465 GDVMELSHKDFKKVDEIPAEAVLVDGLGVGDIGNIVLNDRKRLSEDGLFIVVLSM-RKGK 523 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+I+ G Y + + K V + D D K ++ +I +L L Sbjct: 524 VVAGPDIISRGF-VYMRESEDLIDGARKEVRKALSDCENKNITDWKNIKNAIQDSLFHYL 582 Query: 539 KKVWGKKPLVTVFINKI 555 K +KP++ + ++ Sbjct: 583 YKKTQRKPMILPILMEV 599 >gi|163846566|ref|YP_001634610.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524357|ref|YP_002568828.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667855|gb|ABY34221.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448236|gb|ACM52502.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 556 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 286/562 (50%), Gaps = 13/562 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L +PLGG GE+G NM + YG +++DCGV FP D+ GVDLV PDIT+ Sbjct: 1 MAKQRLRVIPLGGAGEVGRNMWVVEYG----DDIVILDCGVMFPDADMLGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ ++ I +TH HEDH GA+ L + L P +Y + +GLL + R+ K+ Sbjct: 57 LREKTDHIRGILLTHGHEDHIGAVPHLIADLGFPPIYGTKLTLGLLGNRLREHRLHDKVT 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + VG F++E+ + HSIP+ + I +P G +V+ DWKLD + G TD Sbjct: 117 TVQINERVPFQVGQFNVEAFHIAHSIPDAVGFAITTPAGLLVYLTDWKLDHTPVDGRPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +GN L L+ D +G SE + + +I A G ++V TF+S++SR Sbjct: 177 LEKIAELGNRKPLVLVTDCVRVESKGYTPSEATVGEAFDNIFATAPGRIIVATFASNISR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS-DESFGLYPREQLIVIA 298 ++ +ID AE GRK++L G S++ +A ++G ++ D+ + YP E++ ++ Sbjct: 237 VQQVIDSAEAYGRKVMLAGRSMETNARIAFELGYLRADESTIIRPHEMSAYPDEEIAIVC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ + NVK+ DTV+ S+ IPGNEV++ + N L + G VI Sbjct: 297 TGSQGEPMSALNRMANRDYPNVKIKPGDTVVLSATPIPGNEVSVNKVINNLFKLGADVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE----GIACVP 414 E VHVSGH +LK + +RP +V HG+ HL+ +++LA V Sbjct: 357 G-PEARVHVSGHAAQEELKLVLALLRPSYIVPFHGDYRHLMLYRKLATTIGAVPDSERVL 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ P +I + G DG +G ++ + R+ L+ G L V V +D Sbjct: 416 LAEGGTIMEFSPGFGKITGKAPVGYIYVDGTTVGDVGNVVVRDRQLLAKDGMLIVVVSID 475 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + + P++V G Y + + +TV + + D + I Sbjct: 476 SATGQLVAGPDVVSRGF-VYMRQSQDLIEATKETVRAALANRNGSNPVDAAYINRKIRDV 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + L + ++P+V + ++ Sbjct: 535 VSEFLYRETRRRPMVLPMVMEV 556 >gi|89096214|ref|ZP_01169107.1| Zn-dependent hydrolase [Bacillus sp. NRRL B-14911] gi|89089068|gb|EAR68176.1| Zn-dependent hydrolase [Bacillus sp. NRRL B-14911] Length = 555 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 178/560 (31%), Positives = 283/560 (50%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + LGGV EIG NM + G I+IDCG FP + L G+DL+ PDI++ Sbjct: 1 MNEGAVSIFALGGVNEIGKNMYVLQSG----DDIIVIDCGGKFPDESLMGIDLIIPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + + ITH HEDH G + ++VPVY + F +GL+E K + Sbjct: 57 LEENRSKIKGLIITHGHEDHIGGIGYFLKRVNVPVYGTRFTLGLIELKLTEHGILADTEL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + +++G+ +VNHSIP+ + + ++P G +VHTGD+K D + D Sbjct: 117 IQIDSDTVLELGSIRASFFKVNHSIPDCLGIAFQTPEGLVVHTGDFKFDLTPMNEQYADI 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G G+LAL+ +STNA R G SE+ + +I + A+ V+++TF+S+V+R+ Sbjct: 177 HKMAELGTSGVLALLSESTNAERTGFSPSERIVGDHILEAFVKAERKVIISTFASNVNRV 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + D + GRK+ LLG S+ VV VA++ G + + + + P E++ ++ T Sbjct: 237 QQVADACFKTGRKLALLGRSMINVVGVAMERGYLTIPEGMLIQGSDTDSLPPEKVCILCT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+LSR R+ ++ DTVI ++ IPGNE + I + L G VI Sbjct: 297 GSQGEPMAALARLSRNNFRDAEVLPGDTVILAAGPIPGNERGVTKIIDNLYMLGANVIYG 356 Query: 360 DAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH Y DLK M ++P+ + IHGE L H+ LA G+ V Sbjct: 357 SGSSTGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEYRMLHHHRLLAESAGVEEGHTFIV 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG ++ + EV G L DG +G ++ + R+QLS G L + Sbjct: 417 KNGDVVDIENGTARQTREVPSGNTLIDGMGVGDVGEVVLRDRKQLSEDGMLVIVFTFSKK 476 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+ + G Y + + + + V +TV DL Q ++ I A+ Sbjct: 477 ERKIVSGPDTISRGF-VYTRESDDLLRKVNSIVKSTVNDLRQENYYQRNSTKQKIKRAVG 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L +KP++ I +I Sbjct: 536 QYLFSETKRKPMILPIIIEI 555 >gi|312876084|ref|ZP_07736072.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797070|gb|EFR13411.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 555 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 185/561 (32%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ + +PLGG+ EIG NM + + + ++IDCG++FP+D++ GVDLV PD Sbjct: 1 MKKKQEHRIRIIPLGGLNEIGKNMLVVE----VNDEIVVIDCGLAFPEDEMLGVDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K ++ + A+ +TH HEDH GA+ + L++P+Y + +GL+E K + + Sbjct: 57 ISYLIKNKEKVRALILTHGHEDHIGAIPYVLRDLNIPIYGTKLTLGLVEIKLMEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 SVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 PIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPPNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ RP+ + +HGE HL+ H +LA++ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLAMELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 STRDVISGPDIITRGF-IYIRESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|312897783|ref|ZP_07757199.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310621167|gb|EFQ04711.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 553 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 298/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E+L+ +PLGG+GEIG NM YG I++D G++FP DD+ G+DLV PD++++ Sbjct: 3 KKEKLMVIPLGGLGEIGKNMTAICYG----DDIIVLDAGLAFPDDDMFGIDLVIPDMSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G L L + ++VPVYA+ GL+E K + Sbjct: 59 IENKDKVRAVVITHGHEDHIGGLAYLLNEVNVPVYATKLVCGLVEGKLKENHIGNYTL-N 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + GD+V +G + + NHSIP+ AL ++PVG IVHTGD+K+D + G + D Sbjct: 118 EVRHGDEVQIGCMKVGFIHTNHSIPDASALYFKTPVGTIVHTGDFKIDLTPVDGLLMDMH 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G G+L LM DSTNA+R G SE+ + + K+A+G +++ TF+S++SRI+ Sbjct: 178 KFAELGRRGVLLLMSDSTNALRPGYTESERTVGEAFRKEFKDAEGRIILATFASNISRIQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ A RK+++LG S+ V+++ ++G + + + + + Y +Q++++ TG Sbjct: 238 QAINTAVLYKRKVLVLGRSMVNNVAISQELGYLDVPEGVLIEADELNRYTADQVLILTTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP + L++++ R+V + DTVI S+ IPGNE +G + L+ G RV+ Sbjct: 298 SQGEPMAGLSRMASNNHRSVSIMPGDTVIISATPIPGNETGVGRTIDNLMRLGARVVFG- 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RN 418 + +HVSGH +LK M I+P+ + +HGE L H ELA++ G+ + N Sbjct: 357 SNKRIHVSGHGSQEELKIMLGLIKPKYFLPVHGEYRMLKKHGELAVEMGVEKDHVLLGDN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G++ + V G DG +G ++ I R+QL+ G + V + L Sbjct: 417 GQIFEFTSRSGQKGGRVNAGRVFVDGLGVGDVGNIVIRDRQQLAMEGMVIVVMTLAKGSS 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G Y D ++ V + ++ +++ + L Sbjct: 477 HALAGPDIVSRGF-VYVRDSEELMNEAHDKVAAVLERCEDENIREWSVIKSQVRDTLSRY 535 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I ++ Sbjct: 536 LFEKTRRRPMILPIIMEV 553 >gi|304408061|ref|ZP_07389711.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] gi|304343080|gb|EFM08924.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] Length = 560 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 283/561 (50%), Gaps = 13/561 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L +PLGGV EIG NM + Y I++DCG FP + L G+DL+ PDI +++ Sbjct: 5 KNRLSIIPLGGVNEIGKNMYVIQY----DDDIIIVDCGSKFPDESLLGIDLIVPDIAYLL 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + + ++P+YAS +GL++ K R+ Sbjct: 61 ENKEKVRGLVVTHGHEDHIGGIPYIIKQFNMPIYASRLTLGLIKGKLKEHRLLGTTALHQ 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A KV +G+ + +HSIP+ + + +P G +VHTGD+K D + D Sbjct: 121 IDADSKVVLGSIPLSFFTTSHSIPDCLGIAFHTPQGTVVHTGDFKFDFTPVNDQFADIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG G+LAL+ +STNA R G SE+ + NI + NA G + ++TF+S+V R++ Sbjct: 181 MAEIGKNGVLALLSESTNAERPGFTPSERLVGANILEAFINADGKIFISTFASNVHRLQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 I D AE+ GRK+ L G S+ VV VA +G + + Y +++V+ TGS Sbjct: 241 IFDAAEKTGRKVALAGRSMVNVVDVASTLGYLSIAANQLVELSEVNKYKNHEIVVLCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL +++ G R + +A DTVIF+S IPGNE + I + L + +VI A Sbjct: 301 QGEPMAALGRIASGNHRQIGIAPGDTVIFASSPIPGNERNVARIVDNLFARKAKVIYGSA 360 Query: 362 E-CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH +LK M ++P+ + IHGE L H+ LA G+ + V N Sbjct: 361 TVTGMHVSGHASQEELKLMLTLMQPKYFIPIHGEYRMLHLHRILAESVGVNASNIFIVSN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ +V +G L DG IG ++ + R+ LS G L + + L Sbjct: 421 GDVVDFIGSEAMQERKVANGNTLVDGLGIGDVGNIVLRDRKVLSADGILIIVLTLGKSDN 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQ---FRRKDLKLLRESISSAL 534 I PE++ G + + + + + + + + L + + ++SI ++ Sbjct: 481 KIVSGPEVISRGF-VFVKESEGLMEEIQRLTLDEIERLQEQYTKLNNHWGIYKQSIRDSI 539 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P++ I ++ Sbjct: 540 GKFLFAKTQRRPMILPIIIQV 560 >gi|167630475|ref|YP_001680974.1| metallo-beta-lactamase family protein, putative [Heliobacterium modesticaldum Ice1] gi|167593215|gb|ABZ84963.1| metallo-beta-lactamase family protein, putative [Heliobacterium modesticaldum Ice1] Length = 573 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 11/555 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGVGE+G NM + YG I+ID GV FP ++L G+DLV PDIT++++ Sbjct: 26 TVSVIPLGGVGEVGKNMLVIEYG----DDIIVIDSGVKFPGEELLGIDLVIPDITYLVQN 81 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + IF+TH HEDH G L + VPVY + +GL++ K + ++ Sbjct: 82 ADRVRGIFLTHGHEDHIGGLPFTLKQIQVPVYGTRLTLGLVKNKLTEHGLIREAKLHEIT 141 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 A D V+VGAF +E RVNHSIP+ + + IR+P G IVH+GD+KLD + V + L Sbjct: 142 ADDVVNVGAFQLEFFRVNHSIPDGIGIAIRTPAGLIVHSGDFKLDQTPVDDKVLEFSKLA 201 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G+EG+L +CDSTN R G SE+ + + +++ TF+S+V RI+ +I Sbjct: 202 RYGDEGVLLFICDSTNVERPGYTPSERTVGDTFRSVFAKTDSRIIIATFASNVHRIQQVI 261 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A + RK+ ++G S+ VV V+ +G + + + E P Q+ +I TGSQG Sbjct: 262 DTAAEFNRKVAVVGRSMVTVVDVSQQLGYLNIPRGMLIEAEEIDRLPDNQVTIITTGSQG 321 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL +++ R V + + DTVI S+ IPGNE + + L G V+ ++ Sbjct: 322 EPMAALTRMATNNHRQVAIRQGDTVIISATPIPGNEKLVSRTIDNLFRIGADVVYKEV-A 380 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK--M 421 VHVSGH ++K M ++RP+ ++ HGE H +L GI +R Sbjct: 381 NVHVSGHAAQQEIKLMLNFLRPKYVIPFHGEYRHQATFAKLGQTMGIPDEHILRVNIGER 440 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L + +++ V G + DG +G ++ + R L+ G + V +D + N+ Sbjct: 441 YELNEEMVQLTGTVEAGSVMVDGIGVGDVGNIVLRDRHHLAQDGVVIAVVTIDKENGNVL 500 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++V G + + G + V + + +L+ I L + Sbjct: 501 AGPDLVSRGF-VFVREAGDMLGEAKSRVKEAL-TGRNTGTTEWSVLKNLIRDTLNEFFYQ 558 Query: 541 VWGKKPLVTVFINKI 555 ++P+V I +I Sbjct: 559 KTKRRPIVLPIIMEI 573 >gi|320120573|gb|EFE29041.2| metallo-beta-lactamase family protein [Filifactor alocis ATCC 35896] Length = 555 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 182/559 (32%), Positives = 316/559 (56%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ +PLGG+ EIG NM Y + I+IDCG+SFP+D++ G+D+V PD++++ Sbjct: 4 KQNKIKIIPLGGLQEIGKNMTAIEY----KDEMIVIDCGLSFPEDEMLGIDVVIPDVSYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K L IF+TH HEDH GA+ + L VP+Y + F + L+E K R+S I Sbjct: 60 VKNHDKLKGIFLTHGHEDHIGAIPYVLRKLDVPIYGTKFTLALVEHKLKENRIS-NAMLI 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 AG V G F I+ +RV HSIP++ AL + +P+G I H+GD+K+D I +VTD Sbjct: 119 EVPAGTSVKAGLFKIDYIRVTHSIPDSCALAVHTPLGIIYHSGDFKIDHTPIDNEVTDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRI 240 + IG G L ++ +STN REG SEK + K + +I A+G V++ TF+S++ R+ Sbjct: 179 KMAEIGARGCLLMLAESTNVEREGYTKSEKVVGKTLDEIFLGAQGNRVIIATFASNIHRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+D++ + GRK+ + G S+ +++A+ +G ++ + + Y ++ L +I T Sbjct: 239 QQIVDMSIKYGRKVAVSGRSMVNGINIALSLGYLRIPKKTLVDINDIHKYSKDSLTIITT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ E + ++++E DTV+ S+ IPGNE ++ + N+L E+G ++ + Sbjct: 299 GSQGEPMAALSRIAASEHKKIQVSEGDTVVLSAHPIPGNEKSVAKVVNQLFERGANIVYD 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 E +HVSGH +LK +++ I+P+ + +HGE HL H ELA + V ++ Sbjct: 359 G-ESDIHVSGHAKREELKLIHRIIKPKFFMPVHGEYRHLYIHGELAQELGMPAENVVLMK 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG +L + + +I +V G L DG +G ++ + R+ LS G + V V L Sbjct: 418 NGAVLEVSRNECQINGQVPSGNVLVDGLGVGDVGNIVLRDRKHLSEDGLMVVVVNLSKQD 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I+ G Y + + + + T++ Q ++ ++ SI L+S Sbjct: 478 GSMVSEPDIISRGF-VYVREAEGLMDEAKEIIKQTLIRNQQKNNREWAYIKTSIKEDLKS 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 537 YLFQKTKRSPMILPIIMEV 555 >gi|312128234|ref|YP_003993108.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] gi|311778253|gb|ADQ07739.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] Length = 555 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 185/561 (32%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ + +PLGG+ EIG NM + + + ++IDCG++FP+D++ GVDLV PD Sbjct: 1 MKKKQEHRIRIIPLGGLNEIGKNMLVVE----VNDEIVVIDCGLAFPEDEMLGVDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K ++ + A+ +TH HEDH GA+ + L++P+Y + +GL+E K + + Sbjct: 57 ISYLIKNKEKVRALILTHGHEDHIGAIPYVLRDLNIPIYGTKLTLGLVEIKLMEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 SVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 PIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPPNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ RP+ + +HGE HL+ H +LA++ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLAMELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 ATRDVISGPDIITRGF-IYIRESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|302871251|ref|YP_003839887.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] gi|302574110|gb|ADL41901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] Length = 555 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 183/561 (32%), Positives = 318/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ + +PLGG+ EIG NM + + + ++IDCG++FP+D++ G+DLV PD Sbjct: 1 MKKKQEHRIRIIPLGGLNEIGKNMLVIE----VNDEIVVIDCGLAFPEDEMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K ++ + A+ +TH HEDH GA+ + L++P+Y + +GL+E K + + Sbjct: 57 ISYLIKNKEKVRALILTHGHEDHIGAIPYVLRDLNIPIYGTKLTLGLVEIKLIEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 SVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 PIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPLNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISATPIPGNEKFVNRVINDLFRQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ +P+ + +HGE HL+ H +LA++ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTKPKYSIPVHGEFKHLIHHAKLAMELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 STRDVLSGPDIITRGF-IYIKESEPLIEEAKRVIKDVLYFCYKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|309790325|ref|ZP_07684892.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308227659|gb|EFO81320.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 558 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 174/564 (30%), Positives = 286/564 (50%), Gaps = 15/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LPLGG GE+G NM + YG + +++DCGV FP D+ GVDLV PDIT+ Sbjct: 1 MAKQRIRVLPLGGAGEVGRNMWVLEYG----DEILILDCGVMFPDADMLGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ + AI +TH HEDH GA+ L + L P VYA+ G+L K R+ K+ Sbjct: 57 LREKTDKVKAILLTHGHEDHIGAVPHLVADLGFPPVYATRLTHGILGNKLKEHRLLDKVN 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I+ D VG F+IE + HSIP+ + I G +V+ DWKLD + G TD Sbjct: 117 TITINDKDAFQVGQFTIEPFHIAHSIPDAVGFAITCAGGLVVYLTDWKLDHTPVDGKPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G LAL+ D +G SE + + +I A G V+V TF+S++SR Sbjct: 177 LVKLAELGQRKPLALITDCVRVESKGYTPSETSVGEAFDNIFAVAPGRVIVATFASNISR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ +I+ AE GRK++LLG S++ +A+++G + + + YP +Q+ V+ Sbjct: 237 VQQVIESAEAYGRKVLLLGRSMENNSRIALEMGYLSASEGTLIRPNEMNAYPDDQIAVVC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++ + +VK+ DTV+ S+ IPGNEV++ + N L G V+ Sbjct: 297 TGSQGEPMAALNRMANRDYPHVKIKPGDTVVVSATPIPGNEVSVNRVINNLFRLGAEVVY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA----CVP 414 ++ VHVSGH +LK + +RP+ ++ HG+ H++ +++LA V Sbjct: 357 G-SQAHVHVSGHAAQEELKLVLALLRPEYVIPFHGDYRHVMLYRKLATNLNDMYTDENVL 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ P +I + G DG +G ++ + R+ L+ G L V V +D Sbjct: 416 IAEGGSIMEFAPGFGKITGKAPVGYIYVDGTTVGDVGNVVVRDRQMLAKDGMLIVVVSID 475 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR--RKDLKLLRESIS 531 + P++V G Y + + TV + R + D + + I Sbjct: 476 ATTGELVAGPDVVSRGF-VYMRQSQDLIESTKNTVRAALTSQNGGRAIQGDSQFVSRKIK 534 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 + L + ++P+V + ++ Sbjct: 535 DVVGEFLYRETRRRPMVLPVVMEV 558 >gi|312792817|ref|YP_004025740.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179957|gb|ADQ40127.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 555 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 188/561 (33%), Positives = 319/561 (56%), Gaps = 12/561 (2%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ + +PLGG+ EIG NM + S + ++IDCG++FP+D++ GVDLV PD Sbjct: 1 MKKKQEHRIRIIPLGGLNEIGKNMLVVE----VSDEIVVIDCGLAFPEDEMLGVDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-K 116 I++++K R+ + A+ +TH HEDH GA+ + L+VP+Y + +GL+E K + + Sbjct: 57 ISYLIKNREKVRALILTHGHEDHIGAIPYVLRDLNVPIYGTKLTLGLVEIKLIEFGIDLN 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +AGD + IE +R HSI +++A+ I +P+G IVHTGD+K+D I G+ Sbjct: 117 SVKLFTVRAGDVISFNNMRIEFIRTTHSIADSVAVAIHTPLGPIVHTGDFKVDFTPIEGE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS Sbjct: 177 PIDLIRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLI 295 + R++ +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP +++ Sbjct: 237 IHRVQQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELDNYPPNKIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG + Sbjct: 297 LITTGSQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQ 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI ED + +HVSGH ++K ++ RP+ + +HGE HL+ H +LA++ G V Sbjct: 357 VIYEDID-DIHVSGHACQEEIKLIHNLTRPKYSIPVHGEFKHLIHHAKLAMELGEKNVFV 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NGK+L + D +++ V G L DG +G ++ + RR L+ G V + +D+ Sbjct: 416 LENGKVLEITKDGAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDS 475 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+I+ G Y + + + + + + + + ++ + L Sbjct: 476 STRDVISGPDIITRGF-IYIRESEPLIEEAKRVIKDVLYFCNKNDITEPNAIKVILKDNL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R+ L + + P++ I +I Sbjct: 535 RNFLFEKTRRNPMIIPIITEI 555 >gi|325292649|ref|YP_004278513.1| metal dependent hydrolase [Agrobacterium sp. H13-3] gi|325060502|gb|ADY64193.1| metal dependent hydrolase [Agrobacterium sp. H13-3] Length = 555 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 323/554 (58%), Positives = 421/554 (75%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG S R+WIM+DCGV+F DLPGVDLV PDI++I Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPESKRQWIMVDCGVTFAGLDLPGVDLVLPDISYI 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +++KNL I ITHAHEDHYGAL+DLW L+VPVYAS F G+LEAKR YE +IP Sbjct: 63 AEQKKNLKGIIITHAHEDHYGALNDLWPGLNVPVYASGFTAGMLEAKRAYEGSRAEIPIT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AGD+++VG F IE+V VNHSIPE M+LVIR+P+GN++HTGDWK+D+ LG +TD+ Sbjct: 123 PFKAGDRINVGPFEIEAVGVNHSIPEPMSLVIRTPLGNVIHTGDWKIDEAPSLGPLTDEA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG EG+LALMCDSTN++R+G SE + + + I++NA+G V +TTFSS+V RIR Sbjct: 183 RFRAIGEEGVLALMCDSTNSLRDGVSPSEHEVSEGLRQIIENAEGRVAITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE GR+++LLGSSLKRVV+V+ D+GI++ + FL+++ +G PR +++VI TGS Sbjct: 243 SIAQAAEAAGREVLLLGSSLKRVVNVSQDLGIMEGIKPFLAEDEYGYIPRNKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EMRNV LA DTV+FSSRAIPGNE AI IKN L+EQG+ ++ ++ Sbjct: 303 QGEPRAALAKLSRDEMRNVALAAGDTVVFSSRAIPGNEKAIIEIKNGLIEQGIHIVTDN- 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP N+L RMY+W +PQ+LV +HGE HLVA KELA Q GI+ VP VRNG + Sbjct: 362 EALVHVSGHPRRNELLRMYEWTKPQILVPVHGEAAHLVAQKELAEQAGISQVPKVRNGNI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E+I++ HG KDG LIG ++GI+ RR+LSF GH+SVNVLLD+ Y+ G Sbjct: 422 LRLAPGPAEVINDAPHGRVFKDGNLIGDLDEMGISNRRKLSFAGHVSVNVLLDSRYDFLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P +D +G + L V+ V +P+ RRKDL LLRES+ A+R+ + Sbjct: 482 DPDVVPFGLPEFDDEGEDMEDTLYDAVLGAVESIPRARRKDLALLRESVRRAVRAAANQA 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ K+ Sbjct: 542 WGKKPIVTVFVTKV 555 >gi|187780082|ref|ZP_02996555.1| hypothetical protein CLOSPO_03678 [Clostridium sporogenes ATCC 15579] gi|187773707|gb|EDU37509.1| hypothetical protein CLOSPO_03678 [Clostridium sporogenes ATCC 15579] Length = 554 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 313/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + Y + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSIKIIPLGGLGEIGKNITAFEY----ENEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLREHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ +E +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKVEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKRGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDVITRGF-IYVKESEALINEVKEIVKEELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|150018945|ref|YP_001311199.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905410|gb|ABR36243.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 571 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 170/554 (30%), Positives = 303/554 (54%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG NM + Y + I+IDCG++FP +DL G+D+V PD+T+++K + Sbjct: 24 LKIIPLGGLGEIGKNMTAFEY----DNEIIVIDCGLAFPDEDLYGIDIVIPDVTYLIKNK 79 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + IFITH HEDH G L + ++VP+Y + +GL+E K + + Sbjct: 80 NKVKGIFITHGHEDHIGGLPYVLKQINVPIYGTRLTLGLIEGKLKEHTMLSDCTLNVVEP 139 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G+ + + IE +R NHSIP++ ++ + +P+G IVH+GD+K+D I G V D Sbjct: 140 GELIKLEQIKIEYIRNNHSIPDSCSIALHTPIGVIVHSGDFKVDFTPIDGKVMDLQRYAQ 199 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G +G+L LM DSTNA+ +G +SEK + + + ++ A G ++V+TF+S+V R++ I D Sbjct: 200 LGKKGVLLLMADSTNALHKGYTMSEKTVGETLENLFSRATGRIIVSTFASNVHRLQQISD 259 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + + RKI G S++ + VA+++G + + + +S + YP ++L ++ TGSQGE Sbjct: 260 CSIKYNRKIAFSGRSMENISEVAMELGYLLIPEDMIISLDEIKNYPDDKLTIVTTGSQGE 319 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + L++++ R++++ E D VI S+ IPGNE A+ ++ N L+++G VI + E Sbjct: 320 SMAGLSRIAASTHRHIQIIEGDMVIISASPIPGNEKAVSNLINDLIKKGANVIYKSIE-D 378 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +HVSGH +L+ + ++P+ + +HGE HL+ H ++A G+ + NG + Sbjct: 379 IHVSGHACEQELRLIQALLKPKFFIPVHGEYKHLITHAKIAESMGVDKSKTFILENGDVF 438 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 L ++ +V G L DG +G + + R+ L+ G ++V + +D I Sbjct: 439 ELTRATGKVSGKVPFGRVLVDGMGVGDIGSMVLRDRKNLAENGIITVVIAIDIRNKIIIS 498 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV G Y + ++ + V V ++ I + + + Sbjct: 499 GPDIVSRGF-VYVRNSEELIDEVRNIVTNVVEKCLDRNITQWAEIKNGIRREVDNYVYTK 557 Query: 542 WGKKPLVTVFINKI 555 +KP++ I ++ Sbjct: 558 MKRKPMILPVIVEL 571 >gi|325290341|ref|YP_004266522.1| Ribocuclease J [Syntrophobotulus glycolicus DSM 8271] gi|324965742|gb|ADY56521.1| Ribocuclease J [Syntrophobotulus glycolicus DSM 8271] Length = 554 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 297/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +L +PLGG+GE+G NM + YG + I+ID G++FP+DD+ G+D+V PD ++I Sbjct: 3 KEHKLQIIPLGGLGEVGKNMTVIRYG----NQMILIDAGLAFPEDDMFGIDIVIPDYSYI 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R L+ +F+TH HEDH G L L + +YA+ +GL+ AK + K Sbjct: 59 IDNRDQLLGVFVTHGHEDHIGTLPYLLRDVDTHIYATTLTLGLIHAKLKENSI-NKFQAT 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G+ + +G F IE +RV+HSIP+++ L I +P+G IVHTGD+KLD + GD+ D Sbjct: 118 AVKPGESIRLGHFKIEFIRVSHSIPDSVGLAIHTPLGTIVHTGDFKLDHTPVSGDILDIH 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L LM DSTN R G SE + + ++ + AK +++ +F+S+V R++ Sbjct: 178 KFSELGQKGVLCLMSDSTNVERPGFTQSESKVGQMFDEVFRAAKERIILASFASNVHRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A + RK+ ++G S+ ++A ++G +K + + + P ++ ++ TG Sbjct: 238 QVIAAAVKTDRKVAIVGRSMLNYATIAAELGYLKIPEGTMVDVDEILNLPSNRICIVTTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + + +++ DTVI S+ IPGNE ++ + L QG VI E Sbjct: 298 SQGEPMSALTRIAMNDHKKIEIQPGDTVIISATPIPGNEKSVAKTVDLLFRQGANVIHES 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 A VHVSGH +LK M ++P+ V +HGE L+ H +LA Q GI + N Sbjct: 358 A-SGVHVSGHASREELKLMLNMVKPRYFVPVHGEYRMLIKHGQLAEQLGIPEENIFIAEN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + I +V G L DG +G ++ + R+QLS G L V + L Sbjct: 417 GSIIEFTKNSACIAGKVTSGRILVDGLGVGDVGNIVLRDRKQLSQEGILIVVMTLSRSSG 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++V G Y + + + T + LL+ I L Sbjct: 477 RIVAGPDVVTRGF-VYVRESESMLDEAKAKIRQTTERCLVSGNIEWALLKNQIRDVLGKH 535 Query: 538 LKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 536 FYEKTRRRPVILPIIQEV 553 >gi|148379274|ref|YP_001253815.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A str. ATCC 3502] gi|153933923|ref|YP_001383649.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A str. ATCC 19397] gi|153934631|ref|YP_001387198.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A str. Hall] gi|148288758|emb|CAL82842.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152929967|gb|ABS35467.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A str. ATCC 19397] gi|152930545|gb|ABS36044.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A str. Hall] Length = 554 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 187/558 (33%), Positives = 314/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+I+ G Y + + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDIITRGF-IYVKESEDLINEVKGIVKKELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|150017124|ref|YP_001309378.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149903589|gb|ABR34422.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 558 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 180/550 (32%), Positives = 316/550 (57%), Gaps = 10/550 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+GEIG N+ ++ Y + ++IDCG+SFP ++L G+DLV PDIT++++ + + Sbjct: 15 PLGGLGEIGKNLTVFEY----EDEIVIIDCGMSFPDEELLGIDLVLPDITYLLRNKDKIK 70 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 FITH HEDH G L + ++VP+YA+ +GL+E+K + + GD + Sbjct: 71 GFFITHGHEDHIGGLPYVLKQINVPIYATKLTLGLIESKLEEHNILSDCTLNMVKPGDII 130 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + G F+IE +R NHSI +++++ + +P+G IVHTGD+K+D I G++ D +G + Sbjct: 131 ETGNFNIEFIRTNHSIADSVSIALHTPIGIIVHTGDFKIDFTPIDGEIIDLQRYAQLGKK 190 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+L LM DSTNA R G +SEK + + + ++ A G V+V TF+SS+ R++ I + + + Sbjct: 191 GVLLLMADSTNATRSGYTMSEKTVGETLNNLFIKADGRVIVATFASSIHRVQQIANASIK 250 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 GRKI G S++++ VA+ +G + +++ + YP ++ +I TGSQGEP +A Sbjct: 251 NGRKIAFSGRSMEKISEVAMSLGYLFIPEEMIIDLNDVKKYPDNKVTIITTGSQGEPMAA 310 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++ G R+++L + DTVI SS IPGN+ A+ + + L E+G +VI E E +HVS Sbjct: 311 LTRIAAGNHRSIQLEKGDTVIISSTPIPGNKKAVSSVVDDLTEKGAKVIYEAIE-DIHVS 369 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH +L+ + ++P+ V +HGE HL++H ++A GI + + G +L L Sbjct: 370 GHACEQELRLIQALLKPKFFVPVHGEYRHLLSHSKIAENMGINKSNIFILEIGDVLELAR 429 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 + EI ++V G L DG +G ++ + R+ L+ G ++V ++++ + P+I Sbjct: 430 NKAEITNKVPAGRVLIDGLGVGDVGNIVLRDRKNLAKDGIITVVIVINRENRTLISGPDI 489 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y D + + + + V +V ++++I + + + +K Sbjct: 490 ITRGF-VYVRDSEDLIREIRRIVFKSVERCLDNDVTGWSEIKDAIRKEVNTYVYTKMKRK 548 Query: 546 PLVTVFINKI 555 P+V I +I Sbjct: 549 PMVLPVITEI 558 >gi|289551099|ref|YP_003472003.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Staphylococcus lugdunensis HKU09-01] gi|289180631|gb|ADC87876.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Staphylococcus lugdunensis HKU09-01] Length = 559 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 169/565 (29%), Positives = 282/565 (49%), Gaps = 13/565 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHQNEVGVYALGGLGEVGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRN 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 I + F + HSIPE +++ +P G IVHTGD+K D + Sbjct: 117 AELIEITEDSVIKSKHFEVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGA-P 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKIHHIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGAEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 I +H SGH D + M + I+P+ + IHGE L AH + + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKFFLPIHGEYRMLTAHGQTGVDCGVPEENVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P+I+ G G I+ + + L + ++ SI Sbjct: 475 FKTNKLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNSNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L + +KP++ I K++ + Sbjct: 535 LQPYLYEKTARKPMILPVIMKVNEE 559 >gi|170758406|ref|YP_001786683.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A3 str. Loch Maree] gi|169405395|gb|ACA53806.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A3 str. Loch Maree] Length = 554 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 186/558 (33%), Positives = 315/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + RK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYDRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + K + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDVITRGF-IYVKESEDLIKEVKEIVKKELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|153939956|ref|YP_001390644.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum F str. Langeland] gi|168178787|ref|ZP_02613451.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum NCTC 2916] gi|152935852|gb|ABS41350.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum F str. Langeland] gi|182670933|gb|EDT82907.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum NCTC 2916] gi|295318721|gb|ADF99098.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum F str. 230613] Length = 554 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 186/558 (33%), Positives = 314/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDVITRGF-IYVKESEDLINEVKGIVKKELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|222150956|ref|YP_002560109.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] gi|222120078|dbj|BAH17413.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] Length = 562 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 165/564 (29%), Positives = 280/564 (49%), Gaps = 12/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E+ LGG+GEIG N Y + ++ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LSKNEVGVFALGGMGEIGKNTYAIEY----QDEIVVIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + +FITH HEDH G + L L+VP+Y P A+GL+ K + + Sbjct: 60 LVENKERIKGLFITHGHEDHIGGVPFLLKQLNVPIYGGPLALGLIRNKLEEHGLLRTASL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + HSIPE +++ +P G IVHTGD+K D + + + Sbjct: 120 NPITEDSIFEFKHLKVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EPANI 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA ISE+ + +N+ I + G ++ TF+S++ R+ Sbjct: 179 AKMARLGEEGVLCLLSDSTNAEVPNFTISEREVGQNVEQIFRKCTGRIIFATFASNIYRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+ A + RKIV+ G S++ + + ++G IK + F+ P+ +L+++ T Sbjct: 239 QQAIEAAVKFDRKIVIFGRSMENNIKIGTELGYIKVPPETFIEANKINTVPKHKLLILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + +DTVIFSS IPGN +++ N L + G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQISIIPEDTVIFSSSPIPGNTLSVNRTINALYKAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + IHGE H +L + G+ V Sbjct: 359 KL-SNIHTSGHGSQEEQKLMLRLMKPKYFMPIHGEYRMQSLHGQLGVDCGVNKDNVFIHE 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 418 NGDVLALTHDSARHAGRIQAGNVLVDGSGIGDIGNVVIKDRKMLSEEGLVIVVVSVDFEK 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVIT-TVVDLPQFRRKDLKLLRESISSALR 535 + P+I+ G Y + G + + + + L + ++ IS L Sbjct: 478 NQLLSGPDIISRGF-VYMRESGHMIYEASRLLKKRVIEKLNSGEDLEWHHIKNVISETLA 536 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L + +KP++ I +++ + Sbjct: 537 PYLYEKTKRKPMILPMIMDVNKDK 560 >gi|329926660|ref|ZP_08281071.1| hypothetical protein HMPREF9412_5576 [Paenibacillus sp. HGF5] gi|328939069|gb|EGG35434.1| hypothetical protein HMPREF9412_5576 [Paenibacillus sp. HGF5] Length = 557 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 176/560 (31%), Positives = 296/560 (52%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++L+ LGGV EIG NM Y + ++IDCG FP ++LPG+DL+ PD T+ Sbjct: 3 IAEKKLLVAALGGVNEIGKNMYFIQY----DQDIVVIDCGSKFPDENLPGIDLIVPDFTY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ +TH HEDH G + L L +PVY + I L++ K R+ + Sbjct: 59 LLDNADKVRALVVTHGHEDHIGGIPYLLKQLPIPVYGTKLTIELIKIKLKEHRILRNSEL 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + A + GA +HSIP+ + +V ++P GN+VHTGD+K D + G D Sbjct: 119 HTIDANSTIQAGAIHASFFSTSHSIPDCVGIVFQTPEGNVVHTGDFKFDMSPVKGPYPDL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+ L+ +STNA R G SE+ + +I + AK V ++TF+S+V+R+ Sbjct: 179 HRMAEIGKQGVKVLLSESTNAERPGFTPSERLVGGHILEAFAQAKQQVFISTFASNVNRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + IID A + RK++LLG S+ VV+VA + G + D L + YP +Q+ V+ T Sbjct: 239 QQIIDAAVETERKLILLGRSMVNVVAVAKEHGYLNMPDDLLIDAGDSERYPPDQIAVLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++L+ + ++++ DTVI ++ AIPGNE + H+ + L G +VI Sbjct: 299 GSQGEPMAALSRLANSKHPHIEILPGDTVIIAAGAIPGNERNLAHVIDNLYVLGAQVIYG 358 Query: 360 D-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH +LK M ++P L+ +HGE L H++LA GI V V Sbjct: 359 SGVTSGMHVSGHGSQEELKLMLTLMKPDYLLPVHGEFRMLYQHRQLAESVGIPNENVFIV 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +NG +++ + ++ G L DG +IG ++ + RRQLS G L + L Sbjct: 419 QNGDTIQIQQGMASLGPKIPSGNSLVDGLMIGNVGNIVLRDRRQLSSDGMLIIVTTLSKT 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PE++ G + D + + V +++ DL + L+++++ + Sbjct: 479 EKQMVAKPELISRGF-IFVKDSEEFMGQIHDIVSSSMKDLTETGSTQWNLIKQTLKDHVG 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 538 KFIYSETKRRPMILPIIIEV 557 >gi|261406803|ref|YP_003243044.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261283266|gb|ACX65237.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 557 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 177/560 (31%), Positives = 297/560 (53%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++L+ LGGV EIG NM Y + ++IDCG FP ++LPG+DL+ PD T+ Sbjct: 3 IAEQKLLVAALGGVNEIGKNMYFIQY----DQDIVVIDCGSKFPDENLPGIDLIVPDFTY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ +TH HEDH G + L L +PVY + I L++ K R+ + Sbjct: 59 LLDNADKVRALVVTHGHEDHIGGIPYLLRQLPIPVYGTKLTIELIKIKLKEHRILRNSEL 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + A + GA +HSIP+ + +V ++P GN+VHTGD+K D + G D Sbjct: 119 HTIDANSTIQAGAIHASFFSTSHSIPDCVGIVFQTPEGNVVHTGDFKFDMSPVKGPYPDL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+ L+ +STNA R G SE+ + +I + AK V ++TF+S+V+R+ Sbjct: 179 HRMAEIGKQGVKVLLSESTNAERPGFTPSERLVGGHILEAFAQAKQQVFISTFASNVNRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + IID A + RK++LLG S+ VV+VA + G + D L + YP +Q+ V+ T Sbjct: 239 QQIIDAAVETERKLILLGRSMVNVVAVAKEHGYLNMPDDLLIDAGDSERYPPDQIAVLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++L+ + ++++ DTVI ++ AIPGNE + H+ + L G +VI Sbjct: 299 GSQGEPMAALSRLANSKHPHIEILPGDTVIIAAGAIPGNERNLAHVIDNLYVLGAQVIYG 358 Query: 360 D-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 A +HVSGH +LK M ++P L+ +HGE L H++LA GI V V Sbjct: 359 SGATSGMHVSGHGSQEELKLMLTLMKPDYLLPVHGEFRMLYQHRQLAESVGIPNENVFIV 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +NG +++ + ++ G L DG +IG ++ + RRQLS G L + L Sbjct: 419 QNGDTIQIQQGMASLGPKIPSGNSLVDGLMIGNVGNIVLRDRRQLSSDGMLIIVTTLSKT 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PE++ G + D + + V +++ DL + L+++++ + Sbjct: 479 EKQMVAKPELISRGF-IFVKDSEEFMGQIHDIVSSSMKDLTETGSTQWNLIKQTLKDHVG 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 538 KFIYSETKRRPMILPIIIEV 557 >gi|70726864|ref|YP_253778.1| hypothetical protein SH1863 [Staphylococcus haemolyticus JCSC1435] gi|123659897|sp|Q4L5A3|RNJ1_STAHJ RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|68447588|dbj|BAE05172.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 559 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 171/565 (30%), Positives = 279/565 (49%), Gaps = 13/565 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHANEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRN 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE ++I +P G IVHTGD+K D + + Sbjct: 117 ASLNEITEDSVIKSKHFEISFYLTTHSIPEAYGVIIDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH + + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGVDCGVKEENVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNANPNIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L ++P++ I K++ Sbjct: 535 LQPYLYDKTARRPMILPVIMKVNED 559 >gi|325679355|ref|ZP_08158940.1| hypothetical protein CUS_6783 [Ruminococcus albus 8] gi|324108952|gb|EGC03183.1| hypothetical protein CUS_6783 [Ruminococcus albus 8] Length = 612 Score = 525 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 173/556 (31%), Positives = 288/556 (51%), Gaps = 12/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ EIG N + S +IDCG++FP ++ GVD+V PD T++ K Sbjct: 63 VKIIPLGGLNEIGKNFTVIE----CSNDMFIIDCGLAFPDSEMLGVDIVIPDFTYVEKNL 118 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + L + ITH HEDH G L VPVY + IGL+E K + + + Sbjct: 119 EKLRGVVITHGHEDHIGGLPYFLKKFPSVPVYGTRLTIGLIEGKLREHELLGSVKLNTVT 178 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G ++E +RVNHSIP+++ + I +P G ++HTGD+K+D I G + D Sbjct: 179 PRQTIRMGCMAVEFIRVNHSIPDSVGMAIHTPAGVLIHTGDFKVDYTPIEGGIIDLPRFA 238 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSI 243 +GN+G+LALM DSTN+ R G SE+ + N+ + A+G +++ TF+S++ R++ I Sbjct: 239 ELGNKGVLALMSDSTNSERPGYTASERKVGDNLEMLFAKAEGKRIIIATFASNIHRVQQI 298 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A GRK+ + G S+ V+SV I++G +K D + + + G Y EQ++++ TGSQ Sbjct: 299 INNAVNTGRKVAVSGRSMVNVISVGIELGYLKVPDGVLIDIDMIGRYLPEQIVLVTTGSQ 358 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL+++S E R V + +D +I S+ IPGNE + + N L++ G V+ E Sbjct: 359 GEPMSALSRMSMNEHRKVSITPQDFIIISANPIPGNEKLVTRVVNDLMKLGAEVVYEKM- 417 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH + K M +P+ + +HGE HL+ HK+ A+ GI + G Sbjct: 418 YEVHVSGHACQEEQKLMLSITKPKFFIPVHGEFKHLMKHKQTAMTVGIPEENIIIAGIGD 477 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ + I EV G L DG +G + + R+ L+ G + +D I Sbjct: 478 VIETDGVDMRITGEVPAGKVLVDGLGVGDVGAIVLRDRKHLAEDGLIIAVATIDRSVGEI 537 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++V G Y + ++ + + T+ + ++ + L + Sbjct: 538 LSGPDLVSRGF-VYVRESEELMNEAKELLTETLQTCLDNNMHEWNAIKGKMKDNLSDFIF 596 Query: 540 KVWGKKPLVTVFINKI 555 + + P++ I +I Sbjct: 597 RRTKRSPMILPIIMEI 612 >gi|254780869|ref|YP_003065282.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040546|gb|ACT57342.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 559 Score = 525 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 559/559 (100%), Positives = 559/559 (100%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF Sbjct: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC Sbjct: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK Sbjct: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI Sbjct: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG Sbjct: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED Sbjct: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK Sbjct: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF Sbjct: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK Sbjct: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 Query: 541 VWGKKPLVTVFINKISRQR 559 VWGKKPLVTVFINKISRQR Sbjct: 541 VWGKKPLVTVFINKISRQR 559 >gi|315658598|ref|ZP_07911469.1| ribonuclease [Staphylococcus lugdunensis M23590] gi|315496387|gb|EFU84711.1| ribonuclease [Staphylococcus lugdunensis M23590] Length = 559 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 169/565 (29%), Positives = 282/565 (49%), Gaps = 13/565 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHQNEVGVYALGGLGEVGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLDEHNLLRN 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 I + F + HSIPE +++ +P G IVHTGD+K D + Sbjct: 117 AELIEITEDSVIKSKHFEVSFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGA-P 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKIHHIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGAEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 I +H SGH D + M + I+P+ + IHGE L AH + + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKFFLPIHGEYRMLTAHGQTGVDCGVPEENVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P+I+ G G I+ + + L + ++ SI Sbjct: 475 FKTNKLLSGPDIISRGFVYMRESGQLIYNAQRRIKTDVISKLNSNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L + +KP++ I K++ + Sbjct: 535 LQPYLYEKTARKPMILPVIMKVNEE 559 >gi|164688534|ref|ZP_02212562.1| hypothetical protein CLOBAR_02179 [Clostridium bartlettii DSM 16795] gi|164602947|gb|EDQ96412.1| hypothetical protein CLOBAR_02179 [Clostridium bartlettii DSM 16795] Length = 558 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 179/559 (32%), Positives = 296/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ EIG NM L Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 7 NTNKIKVMALGGLNEIGKNMTLIEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ R + IFITH HEDH GAL + L VPVY + +IGL++ K ++S Sbjct: 63 LQNRDKVKGIFITHGHEDHIGALPYILKKLDVPVYGTMLSIGLIQVKLKEHKLS-TAKLN 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V + S+E ++ NHSIP ++ + + G I HTGD+K+D I GDV D Sbjct: 122 VITPKQIVKLSNMSVEFIKNNHSIPGACSIAVHTDQGIIYHTGDFKIDLTPIDGDVMDLH 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +C +G EG+L L+ DSTN + G +SEK + + D+ + A ++V TFSS++ R+ Sbjct: 182 RICELGQEGVLLLLADSTNVEKPGYTMSEKTVGAGLDDLFRTAGNSRIIVATFSSNIHRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + IID+A++ RK+ + G S+ V+ VA ++G + +D + + Y +L++I T Sbjct: 242 QQIIDMAKKCNRKVAISGRSMVNVIGVARELGYLDIEDDMLVDLNDISKYDDSELVIITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G RV+ Sbjct: 302 GTQGEPMSALARMASSEHKKVEIRPGDLVIISAHPIPGNEKLISKVINLLFEKGARVVYN 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK + + P+ + +HGE L H ELA + + ++ Sbjct: 362 DL-ADIHVSGHASQEELKLINRMANPKFFMPVHGEYRMLKRHSELAQELGMPAENIFVMQ 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 G++L L + ++ V G L DG +G ++ + R+ LS G + V V + Sbjct: 421 TGQVLELDKNSAKVTTTVPIGNVLVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKED 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 481 GKVLAGPDIISRGF-VYVRESEDLMDGAKTVIKEVLNECEEKNIKEWAYLKNNIKENLKE 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + P++ I ++ Sbjct: 540 YLYTKTKRNPMILPIIMEV 558 >gi|229918494|ref|YP_002887140.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229469923|gb|ACQ71695.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 555 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 164/558 (29%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N + + + I+ID G+ FP+DDL G+D V PD +++ Sbjct: 5 KNHQTAVFALGGLGEIGKNTYVVQF----QDEIIVIDAGIMFPEDDLLGIDYVIPDYSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G + L + +P+YA+ A+GL++ K + ++ Sbjct: 61 IKNKDKVKGVFITHGHEDHIGGIPFLLKQVQLPIYATKLALGLIKVKLEEHGLLREAELH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + SI R HSIP ++ +V+++P GNIVHTGD+K D + + D Sbjct: 121 EIDEDSLIKFRKTSISFFRTTHSIPNSLGVVVKTPQGNIVHTGDFKFDFTPVG-EPADLA 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+L L+ DSTNA EG +SE + I + + A G ++ TF+S++ R++ Sbjct: 180 KMAEIGKEGVLCLLSDSTNAEVEGFTMSESVVGGTISETFRKADGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D + GR +++ G S+++V+++ ++G I + + Y ++ ++ TG Sbjct: 240 QVVDACAETGRHLMIFGRSMEKVMTIGQELGFINVPKGMIIEANQMRHYDPNEIAILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V + DTVIFSS IPGN +++G ++L + G V+ Sbjct: 300 SQGEPMAALSRIANGTHRQVSIIPGDTVIFSSSPIPGNAISVGKTIDQLYKAGADVVYGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + M + + P+ + IHGE L H ELA GI + N Sbjct: 360 LT-NIHTSGHGSQQEQLLMIRLLNPKFFMPIHGEYRMLKKHAELAESVGIPKENSFVMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++L + + + ++ DG IG ++ + RR LS G + V + +D Sbjct: 419 GEVLAVDSESAAVTGKISANAVYIDGNGIGDIGNIVLRDRRILSEDGLVVVVISIDGKTR 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + + + + TV ++ +++ +S L Sbjct: 479 KLVSGPDIISRGF-VYMRESGSLIRDGERLLKKTVEQGLSNKQMKWSEMKQLVSDTLTPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P+V I ++ Sbjct: 538 LAQKTRRHPMVLPIIMEV 555 >gi|283470300|emb|CAQ49511.1| protein_0989 [Staphylococcus aureus subsp. aureus ST398] Length = 565 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|15924079|ref|NP_371613.1| hypothetical protein SAV1089 [Staphylococcus aureus subsp. aureus Mu50] gi|15926675|ref|NP_374208.1| hypothetical protein SA0940 [Staphylococcus aureus subsp. aureus N315] gi|21282701|ref|NP_645789.1| hypothetical protein MW0972 [Staphylococcus aureus subsp. aureus MW2] gi|49483252|ref|YP_040476.1| hypothetical protein SAR1063 [Staphylococcus aureus subsp. aureus MRSA252] gi|49485927|ref|YP_043148.1| hypothetical protein SAS1024 [Staphylococcus aureus subsp. aureus MSSA476] gi|57651698|ref|YP_185962.1| hypothetical protein SACOL1098 [Staphylococcus aureus subsp. aureus COL] gi|87159956|ref|YP_493687.1| hypothetical protein SAUSA300_0989 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194787|ref|YP_499584.1| hypothetical protein SAOUHSC_01035 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267582|ref|YP_001246525.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150393637|ref|YP_001316312.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|151221168|ref|YP_001331990.1| hypothetical protein NWMN_0956 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979412|ref|YP_001441671.1| hypothetical protein SAHV_1081 [Staphylococcus aureus subsp. aureus Mu3] gi|161509271|ref|YP_001574930.1| hypothetical protein USA300HOU_1031 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140511|ref|ZP_03565004.1| hypothetical protein SauraJ_02611 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316342|ref|ZP_04839555.1| hypothetical protein SauraC_09411 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731699|ref|ZP_04865864.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733676|ref|ZP_04867841.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|255005876|ref|ZP_05144477.2| hypothetical protein SauraM_05385 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425141|ref|ZP_05601567.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427804|ref|ZP_05604202.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430439|ref|ZP_05606821.1| ribonuclease [Staphylococcus aureus subsp. aureus 68-397] gi|257433141|ref|ZP_05609499.1| ribonuclease [Staphylococcus aureus subsp. aureus E1410] gi|257436040|ref|ZP_05612087.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus M876] gi|257795180|ref|ZP_05644159.1| ribonuclease J 1 [Staphylococcus aureus A9781] gi|258407111|ref|ZP_05680260.1| ribonuclease J 1 [Staphylococcus aureus A9763] gi|258421797|ref|ZP_05684718.1| ribonuclease J 1 [Staphylococcus aureus A9719] gi|258423589|ref|ZP_05686479.1| ribonuclease J 1 [Staphylococcus aureus A9635] gi|258436161|ref|ZP_05689144.1| ribonuclease J 1 [Staphylococcus aureus A9299] gi|258443350|ref|ZP_05691693.1| ribonuclease J 1 [Staphylococcus aureus A8115] gi|258444960|ref|ZP_05693277.1| ribonuclease J 1 [Staphylococcus aureus A6300] gi|258449865|ref|ZP_05697963.1| ribonuclease J 1 [Staphylococcus aureus A6224] gi|258451964|ref|ZP_05699980.1| ribonuclease J 1 [Staphylococcus aureus A5948] gi|258454964|ref|ZP_05702927.1| ribonuclease J 1 [Staphylococcus aureus A5937] gi|262052223|ref|ZP_06024429.1| hypothetical protein SA930_0914 [Staphylococcus aureus 930918-3] gi|269202700|ref|YP_003281969.1| hypothetical protein SAAV_1054 [Staphylococcus aureus subsp. aureus ED98] gi|282894116|ref|ZP_06302347.1| ribonuclease J 1 [Staphylococcus aureus A8117] gi|282903638|ref|ZP_06311526.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus C160] gi|282905407|ref|ZP_06313262.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282908379|ref|ZP_06316210.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910666|ref|ZP_06318469.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282913864|ref|ZP_06321651.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus M899] gi|282918788|ref|ZP_06326523.1| hypothetical protein SASG_00094 [Staphylococcus aureus subsp. aureus C427] gi|282923910|ref|ZP_06331586.1| hypothetical protein SARG_01451 [Staphylococcus aureus subsp. aureus C101] gi|282928611|ref|ZP_06336208.1| ribonuclease J 1 [Staphylococcus aureus A10102] gi|283770151|ref|ZP_06343043.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus H19] gi|283957833|ref|ZP_06375284.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus A017934/97] gi|284024014|ref|ZP_06378412.1| hypothetical protein Saura13_05464 [Staphylococcus aureus subsp. aureus 132] gi|293500901|ref|ZP_06666752.1| hypothetical protein SCAG_01431 [Staphylococcus aureus subsp. aureus 58-424] gi|293509857|ref|ZP_06668566.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 73 kDa -like protein [Staphylococcus aureus subsp. aureus M809] gi|293526443|ref|ZP_06671128.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus M1015] gi|294848078|ref|ZP_06788825.1| ribonuclease J 1 [Staphylococcus aureus A9754] gi|295405893|ref|ZP_06815702.1| hypothetical protein SMAG_01051 [Staphylococcus aureus A8819] gi|295427577|ref|ZP_06820209.1| hypothetical protein SIAG_00096 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276490|ref|ZP_06858997.1| hypothetical protein SauraMR_09074 [Staphylococcus aureus subsp. aureus MR1] gi|297208273|ref|ZP_06924703.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246363|ref|ZP_06930207.1| hypothetical protein SLAG_02442 [Staphylococcus aureus A8796] gi|297591469|ref|ZP_06950107.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus MN8] gi|300912350|ref|ZP_07129793.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus TCH70] gi|304381353|ref|ZP_07364006.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81649514|sp|Q6GAC5|RNJ1_STAAS RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81651358|sp|Q6GHZ6|RNJ1_STAAR RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81694759|sp|Q5HGZ5|RNJ1_STAAC RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81704520|sp|Q7A171|RNJ1_STAAW RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81705877|sp|Q7A682|RNJ1_STAAN RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81781789|sp|Q99V09|RNJ1_STAAM RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|122539808|sp|Q2FZG9|RNJ1_STAA8 RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|123486435|sp|Q2FHZ1|RNJ1_STAA3 RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|13700890|dbj|BAB42186.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14246859|dbj|BAB57251.1| similar to Zn-dependent hydrolase [Staphylococcus aureus subsp. aureus Mu50] gi|21204139|dbj|BAB94837.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241381|emb|CAG40065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49244370|emb|CAG42798.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285884|gb|AAW37978.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87125930|gb|ABD20444.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202345|gb|ABD30155.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740651|gb|ABQ48949.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149946089|gb|ABR52025.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|150373968|dbj|BAF67228.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721547|dbj|BAF77964.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368080|gb|ABX29051.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724513|gb|EES93242.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728376|gb|EES97105.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|257272117|gb|EEV04249.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257274645|gb|EEV06132.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278567|gb|EEV09186.1| ribonuclease [Staphylococcus aureus subsp. aureus 68-397] gi|257281234|gb|EEV11371.1| ribonuclease [Staphylococcus aureus subsp. aureus E1410] gi|257284322|gb|EEV14442.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus M876] gi|257789152|gb|EEV27492.1| ribonuclease J 1 [Staphylococcus aureus A9781] gi|257841266|gb|EEV65711.1| ribonuclease J 1 [Staphylococcus aureus A9763] gi|257842130|gb|EEV66558.1| ribonuclease J 1 [Staphylococcus aureus A9719] gi|257846290|gb|EEV70314.1| ribonuclease J 1 [Staphylococcus aureus A9635] gi|257848850|gb|EEV72835.1| ribonuclease J 1 [Staphylococcus aureus A9299] gi|257851440|gb|EEV75379.1| ribonuclease J 1 [Staphylococcus aureus A8115] gi|257856082|gb|EEV79000.1| ribonuclease J 1 [Staphylococcus aureus A6300] gi|257856785|gb|EEV79688.1| ribonuclease J 1 [Staphylococcus aureus A6224] gi|257860179|gb|EEV83011.1| ribonuclease J 1 [Staphylococcus aureus A5948] gi|257862844|gb|EEV85609.1| ribonuclease J 1 [Staphylococcus aureus A5937] gi|259159894|gb|EEW44932.1| hypothetical protein SA930_0914 [Staphylococcus aureus 930918-3] gi|262074990|gb|ACY10963.1| hypothetical protein SAAV_1054 [Staphylococcus aureus subsp. aureus ED98] gi|269940584|emb|CBI48963.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus TW20] gi|282313882|gb|EFB44274.1| hypothetical protein SARG_01451 [Staphylococcus aureus subsp. aureus C101] gi|282316598|gb|EFB46972.1| hypothetical protein SASG_00094 [Staphylococcus aureus subsp. aureus C427] gi|282321932|gb|EFB52256.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus M899] gi|282325271|gb|EFB55580.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282328044|gb|EFB58326.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330699|gb|EFB60213.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282589650|gb|EFB94736.1| ribonuclease J 1 [Staphylococcus aureus A10102] gi|282595256|gb|EFC00220.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus C160] gi|282763602|gb|EFC03731.1| ribonuclease J 1 [Staphylococcus aureus A8117] gi|283460298|gb|EFC07388.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus H19] gi|283789982|gb|EFC28799.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus A017934/97] gi|285816770|gb|ADC37257.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Staphylococcus aureus 04-02981] gi|290920515|gb|EFD97578.1| ribonuclease J 1 (RNase J1) [Staphylococcus aureus subsp. aureus M1015] gi|291095906|gb|EFE26167.1| hypothetical protein SCAG_01431 [Staphylococcus aureus subsp. aureus 58-424] gi|291467307|gb|EFF09824.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 73 kDa -like protein [Staphylococcus aureus subsp. aureus M809] gi|294824878|gb|EFG41300.1| ribonuclease J 1 [Staphylococcus aureus A9754] gi|294969328|gb|EFG45348.1| hypothetical protein SMAG_01051 [Staphylococcus aureus A8819] gi|295127935|gb|EFG57569.1| hypothetical protein SIAG_00096 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887012|gb|EFH25915.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176729|gb|EFH35989.1| hypothetical protein SLAG_02442 [Staphylococcus aureus A8796] gi|297576355|gb|EFH95071.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus MN8] gi|298694324|gb|ADI97546.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ED133] gi|300886596|gb|EFK81798.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus TCH70] gi|302332699|gb|ADL22892.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus JKD6159] gi|302750913|gb|ADL65090.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340336|gb|EFM06277.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438534|gb|ADQ77605.1| ribonuclease [Staphylococcus aureus subsp. aureus TCH60] gi|312829483|emb|CBX34325.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130326|gb|EFT86313.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS03] gi|315193758|gb|EFU24153.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS00] gi|315196118|gb|EFU26475.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS01] gi|320141095|gb|EFW32942.1| hypothetical protein HMPREF9528_00713 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143152|gb|EFW34942.1| hypothetical protein HMPREF9529_01384 [Staphylococcus aureus subsp. aureus MRSA177] gi|323441665|gb|EGA99311.1| hypothetical protein SAO46_2372 [Staphylococcus aureus O46] gi|329313757|gb|AEB88170.1| Ribonuclease J 1 [Staphylococcus aureus subsp. aureus T0131] gi|329725185|gb|EGG61674.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 21172] gi|329728833|gb|EGG65254.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 21193] gi|329730731|gb|EGG67110.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus 21189] Length = 565 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|310829298|ref|YP_003961655.1| beta-lactamase domain protein [Eubacterium limosum KIST612] gi|308741032|gb|ADO38692.1| beta-lactamase domain protein [Eubacterium limosum KIST612] Length = 581 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 306/558 (54%), Gaps = 12/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++L +P+GG+GEIG NM ++ Y + I++DCG+ FP D++ G+D+V PD ++I+ Sbjct: 31 KDKLKVIPIGGLGEIGKNMTVFEY----KDEMIIVDCGLKFPDDEMYGIDIVLPDFSYIV 86 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPC 120 + L +FITH HEDH G + L L + P+YA+ F +GL++ K V R+ + Sbjct: 87 ENADKLKGLFITHGHEDHIGGIVYLVKKLGITVPIYATKFTMGLIDKKLVEHRLVTSVDR 146 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +AGD+V G+F +E +RVNHS+ +++A I++P +++HTGD+K+D I G++ D Sbjct: 147 QVVKAGDRVQKGSFEVEFIRVNHSVADSVAFYIKTPAASVLHTGDFKIDYQPIDGEIMDL 206 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G++GI LM DSTN G SE + Y++ + K +++TTF+S+V R+ Sbjct: 207 QRIAKLGSQGIDLLMADSTNVEEPGFTPSESSVGATFYNLFRGCKNRIIITTFASNVHRV 266 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + IID A RK+++ G S++ +V VA D+G +K + + + Y +L+VI T Sbjct: 267 QQIIDAAASYKRKVIINGRSMENMVEVASDLGYLKIPKNILIDIKDMKSYKDSELVVITT 326 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ GE R + + ++DTVI S+ +PGNE + + N+LV+ G V+ + Sbjct: 327 GSQGEPMAALGRMAHGEHRFLNIKKEDTVIISASPVPGNEKMVAEVINKLVDLGSEVVYK 386 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +LK + ++P+ + +HGE LV H LA G + Sbjct: 387 KF-ADIHVSGHARQEELKLVQTLVKPKFFLPVHGEARMLVHHAALAESVGTDKRNIFLAE 445 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L +I +V L DG +G ++ + R++LS G V V + + Sbjct: 446 NGTILELDHRSCKITGKVQAEPVLVDGLGVGDIGNIVLNDRKRLSEDGLFIVVVTM-HKG 504 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P+I+ G Y + ++ + V ++ + D ++ I +L Sbjct: 505 KAISGPDIISRGF-VYVRESEELINTAREEVKKALLACEEKGVVDWSSIKNEIRESLFRY 563 Query: 538 LKKVWGKKPLVTVFINKI 555 L +KP++ + ++ Sbjct: 564 LYSQTNRKPMILPILMEV 581 >gi|298244005|ref|ZP_06967812.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer DSM 44963] gi|297557059|gb|EFH90923.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer DSM 44963] Length = 553 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 183/560 (32%), Positives = 296/560 (52%), Gaps = 12/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +++ +PLGG+GEIG NM + YG +++D GV FP D++ GVDLV PD ++ Sbjct: 1 MTKDKIRVVPLGGLGEIGKNMMVIEYG----DDILIVDVGVMFPDDEMFGVDLVIPDTSY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ + I ITH HEDH G+L + L P +YA+ GL++ K R+ +K Sbjct: 57 LADKKHRIRGILITHGHEDHVGSLPYVLPMLDFPPIYATRLTQGLIQVKLKEHRLLEKTI 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 DK+++G+ IE RVNHSIP+ + +VIR+P+G +VHTGD+K D + G D Sbjct: 117 INVISPEDKLELGSCGIEFFRVNHSIPDAIGIVIRTPIGTVVHTGDYKFDYTPVDGKPAD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +GN+G+L +M DST G SE+ I ++ I NA G V+V TF+S +SR Sbjct: 177 LGKLGELGNQGVLLMMGDSTRVESPGYTPSERVINDSLDKIFANAPGRVIVATFASLISR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D AE+ R + L+G S+ V +AI++G ++ + + E + Q+++I Sbjct: 237 VQQVVDTAERYERFVALVGRSMVNNVQMAIELGYLRVPKGMLIRAEDINKFNPGQVVIIC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ + R V++ E DTVI S+ +PGNE + N L QG V Sbjct: 297 TGSQGEPTSALTRIANEDHRLVRIQEADTVILSATPVPGNEKMVHRTINSLFRQGAEVFY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 + VHVSGH +LK M +RP+ + +HGE L+ H +LA + Sbjct: 357 QGL-SNVHVSGHAAQEELKLMLSLLRPKFFLPVHGEYRQLILHAKLAYSLGTPEEHIVVA 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L + IE++ G DG +G + + R+ LS G L + +D Sbjct: 416 EDGDIIELTQERIEMVGHTTSGNVYVDGLSVGDVGQIVLRDRKVLSQDGILMAVLTVDKE 475 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 P+IV G Y D ++ + VI ++ L D +++ I S L Sbjct: 476 TGQPIAGPDIVTRGF-VYMRDAEELLASARERVIDSLSGLNGHS-SDWSFVKDKIKSTLS 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + ++P++ + ++ Sbjct: 534 EYLYEKTRRRPMILPVVMEV 553 >gi|170756499|ref|YP_001780917.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum B1 str. Okra] gi|169121711|gb|ACA45547.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum B1 str. Okra] Length = 554 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 185/558 (33%), Positives = 314/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 I+D + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIVDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIESKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDVITRGF-IYVKESEDLINEVKGIVKKELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|310640232|ref|YP_003944990.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309245182|gb|ADO54749.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 556 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 296/560 (52%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L+ LGGV EIG NM Y + ++IDCG FP ++LPG+DL+ PD+T+ Sbjct: 2 LADNRLLIAALGGVNEIGKNMYFIQY----DQDIVVIDCGSKFPNENLPGIDLIVPDVTY 57 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + A+ +TH HEDH G + L +++PV+ + I L++ K + + Sbjct: 58 LLENQDKVRALIVTHGHEDHIGGIPYLLKQINIPVFGTKLTIELIKIKLKEHNLLRDAEL 117 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A +DVG HSIP+ + + ++P GN+VHTGD+K D + G D Sbjct: 118 HLIDADSTIDVGKIQTSFFTTVHSIPDCLGVFFQTPEGNVVHTGDFKFDMSPVSGPFPDL 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+ L+ +STNA R G SE+ + +I D AK V ++TF+S+V+R+ Sbjct: 178 HRMAEIGKKGVKVLLSESTNAERPGFTPSERLVGGHILDAFARAKQQVFISTFASNVNRV 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +ID A + GRK+VLLG S+ VV+VA ++G + + L + YP E++ V+ T Sbjct: 238 QQVIDAAVETGRKLVLLGRSMVNVVTVAKELGFLHMPEDLLIEAGETERYPAEKIAVLCT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++L+ +++ DTVI ++ AIPGNE + + + L G VI Sbjct: 298 GSQGEPMAALSRLANSLHPKIEILPGDTVIIAAGAIPGNERNLSQVIDNLYVLGANVIYG 357 Query: 360 DAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 +HVSGH +LK M ++PQ L+ IHGE L H++LA + V V Sbjct: 358 SGSATGMHVSGHGSQEELKLMMTLMKPQYLIPIHGEFRMLHQHRQLAESVGIPMENVFIV 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +NG+ +++ + +V G L DG + G ++ + R++L+ G L + + L Sbjct: 418 QNGETIQIAEGRASLGPKVPSGNSLVDGLVTGDVGNIVLRDRKKLASDGMLIIVMTLSKN 477 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PE++ G + D ++ + T++ TV +L + L+++ + + Sbjct: 478 EKQMLATPEVISRGF-VFVKDSEELMNQIRDTIMATVNELTEIEMSQWGLIKQMLKDNVG 536 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 537 QFIYSQTKRRPMILPIIIEV 556 >gi|282925273|ref|ZP_06332930.1| ribonuclease J 1 [Staphylococcus aureus A9765] gi|282592549|gb|EFB97559.1| ribonuclease J 1 [Staphylococcus aureus A9765] Length = 565 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPYFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|282916339|ref|ZP_06324101.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus D139] gi|282319779|gb|EFB50127.1| ribonuclease J 1 [Staphylococcus aureus subsp. aureus D139] Length = 565 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKVPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|210622577|ref|ZP_03293259.1| hypothetical protein CLOHIR_01207 [Clostridium hiranonis DSM 13275] gi|210154160|gb|EEA85166.1| hypothetical protein CLOHIR_01207 [Clostridium hiranonis DSM 13275] Length = 557 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 181/559 (32%), Positives = 310/559 (55%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +E++ +PLGG+ EIG NM + Y + I+ID G+SFP+D++ G+D+V PDIT++ Sbjct: 6 NDEQIKVIPLGGMNEIGKNMTVIEY----RDEIIIIDAGLSFPEDEMLGIDIVIPDITYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL L +++PVY S ++GLLE K ++ + Sbjct: 62 VKNRDKIKGIFITHGHEDHIGALPYLLKKINIPVYGSRLSMGLLEVKLKEHKLE-NVELH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + + +E V+ HSIP++ ++ I + G I HTGD+K+D I GDV D Sbjct: 121 IIKPREVIKLRNMEVEFVKTTHSIPDSYSIAIHTDQGVIFHTGDFKVDLTPIDGDVMDFR 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +C + EG++ ++ DSTNA R G SEK + + D+ A ++V TF+S++ R+ Sbjct: 181 RICELSEEGVILMLSDSTNAERPGYTKSEKKVGVGLDDLFTKAGDSRIIVATFASNIHRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A++ GRK+ + G S+ VV+VA ++G ++ +D + + G Y ++L++I T Sbjct: 241 QQVVDAAKKHGRKVTVSGRSMLNVVNVAKELGYLEIEDDMIIDLNDVGNYEDKELVIITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + +++ E D VI S+ IPGNE I + N L+E+G V++ Sbjct: 301 GSQGEPMSALARMANSEHKKIEIKEGDLVIISAHPIPGNEKLISKVINFLLEKGAEVVSS 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 + +HVSGH +LK M + ++P+ + HGE L H ELA G+ + + Sbjct: 361 EI-ADIHVSGHACQQELKLMLRLVKPKFFLPAHGEYRMLKKHAELARSLGMNKEDIFVIN 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG +L + D I +V G L DG +G ++ + R+ LS G +++ V + Sbjct: 420 NGDILEVGKDEASIKGKVATGNILVDGLGVGDVGNIVLRDRKHLSEDGLMTIVVTISKEE 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + V + + + K+ L+ +I L+ Sbjct: 480 GRVLAGPDIISRGF-VYVRESEDLMDGAKQIVRDVLSECEEHNIKEWAYLKNNIKEQLKE 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 539 YLYQKTKRNPMILPIIMEV 557 >gi|317129507|ref|YP_004095789.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] gi|315474455|gb|ADU31058.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] Length = 557 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 176/559 (31%), Positives = 299/559 (53%), Gaps = 10/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L LGG+ EIG NM Y I+IDCG FP + L G+DL+ PD++++ Sbjct: 4 QENTLSIFALGGLNEIGKNMYAIQY----EDDIIIIDCGNKFPDESLLGIDLIIPDMSYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ +TH HEDH G + L+VPV+A+ F +GL+E K ++ ++ Sbjct: 60 QENKEKVRALIVTHGHEDHIGGIPFFLKKLNVPVFATRFTLGLIELKLREHKILRESELK 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ G S++ +V HSIP+ + +V R+P GN+VHTGD+K D + D Sbjct: 120 EITSASELTFGKVSVDFFKVTHSIPDCLGMVFRTPEGNVVHTGDFKFDYTPAKNEHADIH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG EG+L L+ +STNA R G SE+ + +++ + A+ V+++TF+S+VSR++ Sbjct: 180 KLAEIGKEGVLLLLSESTNAERPGATPSEQMVGEHVDEAFMKAQQKVILSTFASNVSRVQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A + RK+ LLG S+ VV VA++ G ++ + + + P E++ ++ TG Sbjct: 240 QVVDAARKTNRKLALLGRSMVNVVEVAMERGYLQVPEGMIIDQNQINDLPPERVAILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++LS G R V++ DTVI ++ IPGNE + I + L G VI Sbjct: 300 SQGEPMAALSRLSTGNFRGVEVLPGDTVILAAGPIPGNERNVTRIVDNLFTIGANVIYGS 359 Query: 361 -AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH Y DLK M ++P+ + IHGE L H+ LA G+ + Sbjct: 360 GSSSGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEMRMLQKHRLLAESIGVEEGNTFIIN 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ + +V G DG +G D+ + R+QLS G L V + + Sbjct: 420 NGDVVDIKSGIARHTRKVTAGNTYVDGVGVGDVGDIVLRDRKQLSEDGMLIVVLTMSKSE 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+ + G Y + ++ K + K + TV ++P+ + + ++++ + ++ Sbjct: 480 KKLVTSPDTISRGF-VYMRESEELLKDVNKLIEKTVNEVPESNKNEWGVIKQHVKKSIGQ 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 L KKP++ I +I Sbjct: 539 YLFSHTRKKPMILPIIIEI 557 >gi|319652780|ref|ZP_08006887.1| Zn-dependent hydrolase [Bacillus sp. 2_A_57_CT2] gi|317395507|gb|EFV76238.1| Zn-dependent hydrolase [Bacillus sp. 2_A_57_CT2] Length = 557 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 178/557 (31%), Positives = 298/557 (53%), Gaps = 10/557 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L LGG+ EIG NM + Y ++ID G FP + L G+DL+ PDIT++ + Sbjct: 6 KQLSIFSLGGINEIGKNMYVIQY----DDDIVVIDAGGKFPDETLLGIDLIIPDITYLEE 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + + +TH HEDH G + L +++PVYA+ F +GL+E K R+ I+ Sbjct: 62 NRDKIRGLIVTHGHEDHIGGVAYLLKKINMPVYATRFTLGLIELKLTEHRLLGDSELITI 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +VD G + +VNHSIP+ + +V ++P GN+VHTGD+K D + + D + Sbjct: 122 DSDSRVDFGEIGVSFFKVNHSIPDCLGIVFKTPEGNVVHTGDFKFDLTPVNQEHADIHRM 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG G+LAL+ +STNA R G +E + +NI + A ++++TF+S+VSR++ + Sbjct: 182 AEIGRSGVLALLSESTNAERSGFSPTEHIVGENIEEAFMKAPRKIIISTFASNVSRVQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + A + RK+VLLG S+ VV VAI+ G + + + ++ E++ ++ TGSQ Sbjct: 242 VAAAIKTNRKLVLLGRSMVNVVDVAIERGYLTVPEGMIVNPREAINLAPEKVCILCTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL++LS G R+ ++ +DTVI ++ IPGNE + I + L + G RVI Sbjct: 302 GEPMAALSRLSAGNYRDAEIHPEDTVILAASPIPGNERDVSKIIDNLFKLGARVIYGSGS 361 Query: 363 C-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH Y DLK M ++P+ + IHGE L HK LA G+ ++NG Sbjct: 362 STGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEYRMLHHHKLLAESIGVENGHTFIIKNG 421 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 +++ + V G DG +G + + R+QLS G + + + + Sbjct: 422 EVVDIENGEARQTRRVPAGDTYVDGVGVGDIGSIVLRDRKQLSEDGMIVIVLTMSKSERK 481 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P+ + G Y + + + + + TV DLP+ + ++++SI +L L Sbjct: 482 MISRPDTISRGF-VYARESEDLLREINRIAEKTVNDLPEQDKSQWNVIKQSIKKSLGQYL 540 Query: 539 KKVWGKKPLVTVFINKI 555 + +KP++ I +I Sbjct: 541 FEKTKRKPMILPIIIEI 557 >gi|262048676|ref|ZP_06021558.1| hypothetical protein SAD30_1506 [Staphylococcus aureus D30] gi|259163132|gb|EEW47692.1| hypothetical protein SAD30_1506 [Staphylococcus aureus D30] Length = 565 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 173/566 (30%), Positives = 287/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ + ++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHESLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|317133216|ref|YP_004092530.1| RNA-metabolising metallo-beta-lactamase [Ethanoligenens harbinense YUAN-3] gi|315471195|gb|ADU27799.1| RNA-metabolising metallo-beta-lactamase [Ethanoligenens harbinense YUAN-3] Length = 596 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 290/555 (52%), Gaps = 14/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+ EIG N+ Y G +++DCG++FP D+ GVDLV PD+T+++K + Sbjct: 51 LRIVSLGGLNEIGKNITAYECG----DDIVIVDCGLAFPDSDMLGVDLVIPDVTWLVKNK 106 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + +TH HEDH GAL + +++P+Y + + L+E K ++ K+ + Sbjct: 107 DRIRGVVLTHGHEDHIGALPYVLKQVNMPLYGTELTLALVEGKLKEHGLTGKVKLHVVKP 166 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 GD V +G ++E + VNHSI ++AL I +P G V TGD+K+D I G++ D Sbjct: 167 GDTVKLGCMTVEFINVNHSIAGSVALAINTPGGLFVQTGDFKIDCTPIHGEMIDLARFGE 226 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA R G +SE+ + + + + A+G +++ TF+S+V R++ I+ Sbjct: 227 LGKEGVTGLLMDSTNAERPGYTLSERKVGEALNTLFAKAEGKRLIIATFASNVHRVQQIV 286 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A++ GR + + G S+ V +A ++G ++ + L + + +P+E+++++ TGSQG Sbjct: 287 DYAQKYGRHVAVSGRSMVNVCGIAAELGYLRVPEGLVVDIDEIDRFPKEKMVIVTTGSQG 346 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SAL +++ + R V + D VI S+ IPGNE + + N L+ G V+ E Sbjct: 347 EAMSALYRMAYSDHRKVVVGPDDFVIISANPIPGNEKTVDRVVNELMRLGAEVVYE---- 402 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +LK + +P + +HGE HL+ + LA GI + GK+ Sbjct: 403 EVHVSGHARQEELKIIMSLCKPTYFIPVHGEYKHLMKNASLARSIGIPDKNIIITDIGKV 462 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + + + V G L DG +G + + R+ L+ G + V +D + Sbjct: 463 MEFDKGNFKFVGTVPAGRVLVDGTGVGDVGSIVLRDRKHLAQDGLIVVVATIDGASGALV 522 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y + + + T ++D + ++ + AL LL + Sbjct: 523 AGPDIVSRGF-VYVRESESLMEQTRLTARDVLMDCADAHVTEWGTIKSRVKDALSKLLYE 581 Query: 541 VWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 582 RTKRSPMILPVIMEV 596 >gi|225568725|ref|ZP_03777750.1| hypothetical protein CLOHYLEM_04804 [Clostridium hylemonae DSM 15053] gi|225162224|gb|EEG74843.1| hypothetical protein CLOHYLEM_04804 [Clostridium hylemonae DSM 15053] Length = 555 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 181/564 (32%), Positives = 302/564 (53%), Gaps = 18/564 (3%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E +L +PLGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PD Sbjct: 1 MKKENNGKLRIIPLGGLEKIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +T++ + + ITH HEDH GAL + +++P+YA+ +G++E K + + Sbjct: 57 VTYLKDNIQKVKGFVITHGHEDHIGALSYVLKEMNLPIYATKLTMGIIEKKFTEHNLLRS 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD Sbjct: 117 TRRKVVKHGQSINLGQFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D IG +G+LALM DSTNA R G SE+ + I + +++ TF+S+ Sbjct: 177 IDLQRFAEIGKKGVLALMSDSTNAERPGFTQSERTVGHTFDHIFAEHQNTRIIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + RK+V+ G S+ +++VA ++G + D + + YP E+ + Sbjct: 237 VDRVQQIINSACKYDRKVVVEGRSMVNIIAVARELGYLNVPDNALIEIDQLRNYPPEKTV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ + V + DTVIFSS IPGNE ++ + N L +G Sbjct: 297 LITTGSQGESMAALSRMAADVHKKVTIMPGDTVIFSSNPIPGNEKSVSKVINELSAKGAN 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI + HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI + Sbjct: 357 VIFQ----DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGIAQTLGIPKENI 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +++G++L L ++ D+V G L DG +G ++ + R+ L+ G L V + L Sbjct: 413 FILQSGEVLELNSKEAKVADKVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLSL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESIS 531 + + P+IV G Y + K+ V V D ++ D ++ I Sbjct: 473 EKGSNQLLAGPDIVSRGF-VYVRESEKLMDEARNVVSNAVEDCLTHQKNADWSKIKLVIR 531 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 + + K ++P++ I + Sbjct: 532 DTMNEYIWKKTKRRPMILPIIMDV 555 >gi|330686206|gb|EGG97820.1| ribonuclease J 1 [Staphylococcus epidermidis VCU121] Length = 561 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 171/566 (30%), Positives = 284/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHQNEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHNLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 AQLNEINEDSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAKLGEEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAVKHNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPGKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVDCGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ + + L Q + ++ SI Sbjct: 475 FNTNTLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNQNKDIQWHQIKSSIVET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + ++P++ I K++ + Sbjct: 535 LQPYLFEKTARRPMILPVIMKVNEDK 560 >gi|168185032|ref|ZP_02619696.1| RNA-metabolizing metallo-beta-lactamase [Clostridium botulinum Bf] gi|226948561|ref|YP_002803652.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A2 str. Kyoto] gi|237794584|ref|YP_002862136.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum Ba4 str. 657] gi|182671909|gb|EDT83870.1| RNA-metabolizing metallo-beta-lactamase [Clostridium botulinum Bf] gi|226841399|gb|ACO84065.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum A2 str. Kyoto] gi|229263960|gb|ACQ54993.1| RNA-metabolising metallo-beta-lactamase [Clostridium botulinum Ba4 str. 657] Length = 554 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 185/558 (33%), Positives = 314/558 (56%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ VY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRTVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + + + V + + + + + +L+ +I ++ Sbjct: 478 SVIAGPDVITRGF-IYVKESEDLINEVKEIVKKELENCLENKIIEWYVLKSNIKKSVEKY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P+V I +I Sbjct: 537 LYEKTKRRPIVLPIIMEI 554 >gi|242373310|ref|ZP_04818884.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W1] gi|242349020|gb|EES40622.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W1] Length = 577 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 172/566 (30%), Positives = 285/566 (50%), Gaps = 13/566 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 TELHEIDENSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + IG EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAKIGEEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVECGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNGNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + ++P++ I K++ + Sbjct: 535 LQPYLFEKTARRPMILPVIMKVNEDK 560 >gi|219669537|ref|YP_002459972.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219539797|gb|ACL21536.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 552 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 186/557 (33%), Positives = 293/557 (52%), Gaps = 12/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L +PLGG GEIG N+ ++ YG I+ID GV FP D+L G+DLV PDIT++ K Sbjct: 1 MKLSIIPLGGTGEIGKNLLVFEYG----DSIIVIDGGVKFPDDELLGIDLVIPDITYLEK 56 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IFITH HEDH G L L L PVY + +GL+ AK + Sbjct: 57 RKHKIQGIFITHGHEDHIGGLPFLLPKLEAPVYGTKLTMGLVRAKLRERGGYPENLLRVI 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G+ V F +E+ RV HSIP+ + I +P+G +++TGD+K+D I G D L Sbjct: 117 DPGEPVKAKDFQVEAFRVTHSIPDAVGYGILTPLGRVIYTGDFKVDYTPIDGQEMDLGRL 176 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 A G EG+LAL+CDSTNA R G+ ISEK + K + D A+G +++ TF+S+V RI+ Sbjct: 177 AAWGQEGVLALLCDSTNAERSGSTISEKVVGKTLMDAFSRAEGKIIMATFASNVHRIQQA 236 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 ++ A + RK+ ++G S++ VV+ A ++G + + + S +L+++ TGS Sbjct: 237 LEAAALLKRKVCVVGRSMEAVVATARELGYLHLPDPDMLIETSSVNDISPSRLLILTTGS 296 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL +++ G R V ++ DTV+ S+ +PGNE IG N L + G VI +D Sbjct: 297 QGEPLAALTRMATGSHRQVNVSAGDTVVISATPVPGNEKLIGRTINHLFQIGADVITKDM 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH ++K + + RP+ L+ HGE H +A +++ G + + G Sbjct: 357 -GLVHVSGHANQEEIKLIIRLTRPKFLIPHHGEVRHQMAFRKIGNLMGYDDKKIAITQIG 415 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH--Y 477 + L D +E + V G DG IG + + R+QLS G + V L Sbjct: 416 TRVLLDTDKMECAERVESGSVFVDGLGIGDVGQIVLRDRQQLSQDGVVVVVAALSKGSPT 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G + + ++ + K V ++ R + +LR SI +L Sbjct: 476 TLVSGPDIISRGF-TFMKEAEELVEGAKKVVAASIETQINKERWEWGVLRGSIHESLSQY 534 Query: 538 LKKVWGKKPLVTVFINK 554 L ++P++ + + Sbjct: 535 LWDKTRRRPMILPVLLQ 551 >gi|223043895|ref|ZP_03613937.1| beta-lactamase domain protein [Staphylococcus capitis SK14] gi|222442799|gb|EEE48902.1| beta-lactamase domain protein [Staphylococcus capitis SK14] Length = 579 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 169/565 (29%), Positives = 284/565 (50%), Gaps = 13/565 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 TELHEIDESSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAKLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH + ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGVECGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNGNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ L + ++P++ I K++ Sbjct: 535 LQPYLYEKTARRPMILPVIMKVNED 559 >gi|154253650|ref|YP_001414474.1| beta-lactamase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157600|gb|ABS64817.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 567 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 234/552 (42%), Positives = 345/552 (62%), Gaps = 1/552 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FLPLGG GEIGMN+ LYG+G P +R+WIM+D GV+F D PGVD++ PD FI++ Sbjct: 17 DELIFLPLGGSGEIGMNLNLYGFGPPKARQWIMVDLGVTFGDDRTPGVDVIMPDPAFIVE 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +K+L+ I +THAHEDH GA+ +W L PVYA+PF ++ K + + ++P Sbjct: 77 RKKDLLGIVLTHAHEDHIGAVAHIWPRLRCPVYATPFTAAMVRGKLIEAGIENEVPMHII 136 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G + +G F IE V + HSI E L IR+P+G ++HTGDWK+D D + GD D L Sbjct: 137 PLGHRFALGPFDIELVTLTHSILEPNGLAIRTPLGLVMHTGDWKIDPDPVAGDDMDIARL 196 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG+EG+ A++CDSTN GT SE + ++ +++K+ +G V VTTF+S+V+R+ SI Sbjct: 197 SEIGDEGVRAIVCDSTNVFSPGTSGSEADVASSLIELIKSCEGRVAVTTFASNVARLESI 256 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 AE R VL+G S+ RVV A + G + F+S+ PR++++ I TGSQG Sbjct: 257 ARAAEACDRHAVLVGRSMYRVVGAARECGYLTGLAPFVSEHDAAYLPRDKVLFICTGSQG 316 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EPR+ALA+++ ++ L E DTV+FSSR IPGNE +I ++N L E+GVRV+ E + Sbjct: 317 EPRAALARIAEDGHPHIVLEEGDTVVFSSRIIPGNETSIFDLQNLLAERGVRVVTEK-DH 375 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP ++L RMYQWIRP+V V +HGE HL H LA + + +RNG M+R Sbjct: 376 FVHVSGHPCRDELARMYQWIRPEVAVPVHGEARHLAEHAVLARELQVPEQVVIRNGLMVR 435 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P P EI+ EV G DG ++ + + + +RR+L+F G + V+++LD + G P Sbjct: 436 LAPGPAEIVGEVPSGRIYLDGDVLTESDEGAVRERRKLAFAGSVFVSLVLDGKGEVRGEP 495 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 ++ +G+P DG+G L V + LP+ RR D + E + A+R +++ WG Sbjct: 496 QVRLMGLPEEDGNGVSFEDRALDAVEDALDRLPKKRRGDDDAVAEFLRRAVRGDIRRYWG 555 Query: 544 KKPLVTVFINKI 555 KK V + + +I Sbjct: 556 KKAQVAIAVIRI 567 >gi|30261710|ref|NP_844087.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|30255938|gb|AAP25573.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] Length = 549 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 176/552 (31%), Positives = 284/552 (51%), Gaps = 12/552 (2%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + ++D G+ + NHSIP+ + + +P G +VHTGD+K D + Sbjct: 117 ELIVIHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQP 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+ Sbjct: 177 DIHKMAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ Sbjct: 237 RVQQIVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 CTGSQGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + Sbjct: 357 YGSGSSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 VRNG ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 417 IVRNGDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFN 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I P+I+ G Y D + K L K + T+ +L + + +L+ + A Sbjct: 477 KADGDIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREA 535 Query: 534 LRSLLKKVWGKK 545 L + K+ Sbjct: 536 LGKYIYIRIRKE 547 >gi|187934604|ref|YP_001885784.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum B str. Eklund 17B] gi|187722757|gb|ACD23978.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum B str. Eklund 17B] Length = 572 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 307/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +L +PLGG+GEIG N+ + YG + I+IDCG++FP +DL G+D++ PD+T++ Sbjct: 21 NKPKLKIIPLGGLGEIGKNITAFEYG----DEIIVIDCGLAFPDEDLYGIDIIIPDVTYL 76 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + FITH HEDH G + + ++VPVYA+ + L+E+K + Sbjct: 77 IRNKNRVKGFFITHGHEDHIGGIPYVLQQINVPVYATKLTLALIESKLEEHHMLNDCKLN 136 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G+ V + F++E +R NHSIPE ++ + +P+G IVH+GD+K+D I G V + Sbjct: 137 LVEVGESVKLKNFNVEFIRNNHSIPEACSIAMHTPMGIIVHSGDFKIDFTPIDGHVMNLQ 196 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L LM DSTNA+ +G +SEK + + + + A G V+V+TF+S+V R++ Sbjct: 197 RYAELGKKGVLLLMADSTNALHKGYTMSEKTVGETLNGLFSKATGRVIVSTFASNVHRLQ 256 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I D + + RKI G S++++ +A+++G + ++ +S + P +Q+ ++ TG Sbjct: 257 QISDCSIKNKRKIAFSGRSMEKISEIAMNLGYLSIPKEMIVSLDEIKNCPNDQITIVTTG 316 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ + +++ D VI S+ IPGNE A+ ++ N L E+G VI + Sbjct: 317 SQGESMAALSRIAASTHKYIEIQRGDMVIISASPIPGNEKAVSNLINDLTEKGANVIYKT 376 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 E +HVSGH +L+ + ++P+ + +HGE HL+ H ++A G+ + + Sbjct: 377 IE-DIHVSGHACEQELRVIQSLLKPKFFIPVHGEYKHLITHAKIAQSMGLDENNIFLLDT 435 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + L + +++ +V G L DG IG ++ + R+ L+ G ++V V +D Sbjct: 436 GDIFELSRNKGKVVGKVPSGRVLIDGLGIGDVGNMVLRDRKNLAEDGIITVVVAIDRRNK 495 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + + + + V V ++ SI + S Sbjct: 496 VILSGPDIVSRGF-VYVRNSEDLINNVRRIVTKVVEKCLDDNITQWAEIKNSIRREVDSF 554 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I +I Sbjct: 555 VYTTMKRKPMILPVIVEI 572 >gi|82750699|ref|YP_416440.1| hypothetical protein SAB0955c [Staphylococcus aureus RF122] gi|123548933|sp|Q2YX35|RNJ1_STAAB RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|82656230|emb|CAI80643.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] Length = 565 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 173/566 (30%), Positives = 287/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + +I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHLTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|219849323|ref|YP_002463756.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543582|gb|ACL25320.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 557 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 172/563 (30%), Positives = 289/563 (51%), Gaps = 14/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L +PLGG GE+G NM + YG +++DCGV FP D+ GVDLV PDIT+ Sbjct: 1 MAKQRLRVIPLGGAGEVGRNMWVVEYG----DDIVILDCGVMFPDADMLGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ ++ I ITH HEDH GA+ L + L P VY + +GLL + R+ K+ Sbjct: 57 LREKTDHIKGILITHGHEDHIGAVPHLIADLGFPPVYGTKLTLGLLGNRLKEHRLHDKVK 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + VG F++E+ + HSIP+ + I +P G +++ DWKLD + G TD Sbjct: 117 TVQITEREPFQVGIFTVEAFHIAHSIPDAVGFAITTPAGLLIYLTDWKLDHTPVDGRPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +GN L L+ D +G SE + + +I A G ++V TF+S++SR Sbjct: 177 LEKIAELGNRKPLVLITDCVRVESKGYTPSEATVGEAFDNIFATAPGRIIVATFASNISR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS-DESFGLYPREQLIVIA 298 ++ +ID AE GRK++L G S++ +A D+G ++ D+ + YP +++ ++ Sbjct: 237 VQQVIDSAEAYGRKVMLAGRSMETNARIAFDLGYLRADERTIIRPHEMSAYPDDEIAIVC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++ + NVK+ DTV+ S+ IPGNEV++ + N L + G VI Sbjct: 297 TGSQGEPMAALNRMANRDYPNVKIKPGDTVVLSATPIPGNEVSVNKVINNLFKLGADVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE----GIACVP 414 E VHVSGH +LK + +RP +V HG+ HL+ +++LA+ V Sbjct: 357 G-PEARVHVSGHAAQEELKLILALLRPSYIVPFHGDYRHLMLYRKLAMTVGAVPDSERVL 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ P +I+ + G DG +G ++ + R+ L+ G L V V +D Sbjct: 416 LAEGGSIMEFSPGFGKIVGKAPVGYIYVDGTTVGDIGNVVVRDRQLLAKDGMLIVVVSID 475 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISS 532 + + P++V G Y + + +TV + D+ + I Sbjct: 476 SATGELVAGPDVVSRGF-IYMRQSQDLIEATKETVRAALATKNGSNSPVDVTYISRKIRD 534 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 + L + ++P+V + ++ Sbjct: 535 VVSEFLYRETRRRPMVLPMVMEV 557 >gi|108804257|ref|YP_644194.1| hypothetical protein Rxyl_1420 [Rubrobacter xylanophilus DSM 9941] gi|108765500|gb|ABG04382.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM 9941] Length = 547 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 172/552 (31%), Positives = 288/552 (52%), Gaps = 11/552 (1%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +PLGG+GEIG NM +++D G++FP +++PG+DLV PD T++ + Sbjct: 3 VVPLGGLGEIGKNMTAVH----QRSGMLVVDAGMAFPDEEMPGIDLVLPDFTYLREHADR 58 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 L I +TH HEDH GA+ L PVY + +GL+E+K V K AG+ Sbjct: 59 LRGILLTHGHEDHVGAIPYLLREFRAPVYGTRLTLGLVESKLQEFGV-KNADLREVSAGE 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 K G F++E + VNHSIP +A+ +R+ G V +GD+K+D I G+ D L A+G Sbjct: 118 KFSFGGFNVEFINVNHSIPGAVAVALRTSAGLFVFSGDYKVDLTPIEGEPIDLGRLAALG 177 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 EG+LA DSTN+ R G SE+ + + + ++ ++ +G ++V +F+S + RI+ +++ A Sbjct: 178 EEGVLAYFGDSTNSERPGYVPSERVVGETLNEVFRSVEGRIIVASFASHIHRIQQVVEAA 237 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 +Q R + + G S+ R V +A ++G + D + + P + L+V+ TGSQGEP Sbjct: 238 KQHDRLVAVTGRSMVRNVQIARELGYLDLPDAMMVDQRDIRRIPDQDLVVLTTGSQGEPL 297 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +AL++++ G R +++ D V+ ++ IPGNE + N L+ +G +V PVH Sbjct: 298 AALSRIASGTHRTIEVGPDDAVVVAAHPIPGNERGVSRTINNLMRRGAQVFYSPL-KPVH 356 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRL 424 VSGH + K M ++P+ LV +HGE HL+ H A GI + + NG L Sbjct: 357 VSGHAAQEEQKLMLSLLKPRYLVPMHGEFRHLMHHAFTARSLGIPEERIFVLENGARLEF 416 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVP 483 I+ V G+F+ DG + + + +R+QL+ G V +D+ + G P Sbjct: 417 RGREARRIENVPSGMFVVDGGGLADTSGAVMRERQQLAEEGMFIVVARIDSQSGALVGEP 476 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +++ G G + + ++ V T+ D L+ I L S L + Sbjct: 477 DVISRGFVDPQAANG-LVEASIEVVSRTLRRTASRNITDWGQLKNEIRRDLTSFLAERTN 535 Query: 544 KKPLVTVFINKI 555 K+P++ I ++ Sbjct: 536 KRPMILPLIVEV 547 >gi|149180045|ref|ZP_01858550.1| Zn-dependent hydrolase [Bacillus sp. SG-1] gi|148852237|gb|EDL66382.1| Zn-dependent hydrolase [Bacillus sp. SG-1] Length = 556 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 181/562 (32%), Positives = 286/562 (50%), Gaps = 13/562 (2%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M L LGG EIG NM + YG ++IDCG FP + L G+DL+ PDI Sbjct: 1 MSENSSLLSIFALGGCNEIGKNMYVLQYG----EDIVIIDCGGKFPDETLMGIDLIIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +++ + + A+ ITH HEDH G + L L+VPVYA+ F +GL+E K ++ ++ Sbjct: 57 SYLEENADKVKALLITHGHEDHIGGVPYLLKKLNVPVYATNFTLGLIELKLEEHKLRRET 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + A D G V HSIP+ + +V +P G +VHTGD+K D + Sbjct: 117 TLVPIDANSTADFGQIKTSFFNVTHSIPDCLGIVFDTPEGTVVHTGDFKFDWTPLNNQKG 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IG +GILAL+ +STNA R G SE+ + ++ + A G + V+TF+S+V+ Sbjct: 177 DIHRMAEIGKKGILALLSESTNAERGGLSPSEQIVSSHMDEAFMKADGKIFVSTFASNVN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++ A + RK+ LLG S+ VV VAI+ G + + + + + E++ ++ Sbjct: 237 RVQQVVHAAMKTNRKLALLGRSMINVVDVAIERGYLNVPEGMIIDHRDIDTFNSEKVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGE +AL +LS G+ R+V + DTVI ++ IPGNE + I + L G VI Sbjct: 297 CTGSQGEQMAALGRLSSGQFRDVTIDPGDTVILAASPIPGNEKGVSRIIDNLFNLGAHVI 356 Query: 358 AEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 +HVSGH Y DLK M + P + IHGE L H+ LA G+ Sbjct: 357 YGTGSSTGMHVSGHGYQEDLKLMLTLMNPTYFIPIHGETRMLHHHRMLAESVGVEPGNTF 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 ++NG+++ + + G DG +G ++ + RRQLS G L + + L Sbjct: 417 IIKNGEVVDIEGGAARQTRSLPAGDTYVDGVSVGDVGNVVLRDRRQLSEDGILVIVITLS 476 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P+ + G Y D + + + V T+ DLPQ K++++SI + Sbjct: 477 KADQQLLSGPDTISRGF-VYVKDSEGLLRKVNNIVRDTLDDLPQ-GHLQWKVIKQSIMKS 534 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + L K +KP++ I ++ Sbjct: 535 VGQYLFKQTRRKPMIIPIIIEV 556 >gi|27467705|ref|NP_764342.1| hypothetical protein SE0787 [Staphylococcus epidermidis ATCC 12228] gi|57866594|ref|YP_188260.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251810542|ref|ZP_04825015.1| metallo-beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|282876553|ref|ZP_06285418.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|293366923|ref|ZP_06613598.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|81674997|sp|Q5HQ80|RNJ1_STAEQ RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|81843878|sp|Q8CT16|RNJ1_STAES RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|27315249|gb|AAO04384.1|AE016746_174 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637252|gb|AAW54040.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251805953|gb|EES58610.1| metallo-beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|281294641|gb|EFA87170.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|291318898|gb|EFE59269.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|319401588|gb|EFV89798.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] gi|329732880|gb|EGG69226.1| ribonuclease J 1 [Staphylococcus epidermidis VCU144] gi|329734217|gb|EGG70533.1| ribonuclease J 1 [Staphylococcus epidermidis VCU028] gi|329735538|gb|EGG71826.1| ribonuclease J 1 [Staphylococcus epidermidis VCU045] Length = 560 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 173/566 (30%), Positives = 285/566 (50%), Gaps = 13/566 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 TELHEIDESSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G+EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGHEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINSVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E +Q G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVQCGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKGDVISKLNSNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + +KP++ I K++ + Sbjct: 535 LHPYLYEKTARKPMILPVIMKVNEDK 560 >gi|319892085|ref|YP_004148960.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Staphylococcus pseudintermedius HKU10-03] gi|317161781|gb|ADV05324.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Staphylococcus pseudintermedius HKU10-03] gi|323464806|gb|ADX76959.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 559 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 284/561 (50%), Gaps = 10/561 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD T+ Sbjct: 4 LQKNEVGVYALGGLGEIGKNTYAIEY----KDEIVIIDAGIKFPDDNLLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + ++ + ITH HEDH G + L ++VP+Y+ P A+GL+ K + ++ Sbjct: 60 LEQNQDRIVGLIITHGHEDHIGGVPYLLKKINVPIYSGPLALGLIRNKLEEHHLLRQAEL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I +D F + HSIPET +++ +P G IVHTGD+K D + + Sbjct: 120 IEIDEDTVIDSKHFKVSFYLTTHSIPETYGVIVDTPEGKIVHTGDFKFDFTPVGA-PANI 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L L+ DSTN++ +SE+ + +N+ I +N G ++ TF+S++ R+ Sbjct: 179 GKMAQLGDEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCTGRIIFATFASNIYRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ A + RKIV G S++ + + ++G IK + F+ P+ +L+++ T Sbjct: 239 QQAVEAAVKYNRKIVTFGRSMENNIKIGTELGYIKAPPETFVEPNKINSIPKHELLILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G VI Sbjct: 299 GSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYQAGAEVIHS 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH D + M + IRP+ + IHGE LVAH + + G+ V Sbjct: 359 KI-SNIHTSGHGSQGDQQLMLRLIRPKYFLPIHGEYRMLVAHGQTGVDCGVPEENVFIHD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 G +L L D + G L DG IG ++ I R+ LS G + V V +D N Sbjct: 418 IGDVLALTRDSARTAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNK 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G G I+ K + L ++ SI L+ Sbjct: 478 NQLLSGPDIISRGFVYMRESGQLIYDAQKKIKQDVIYKLNNNENIQWHQVKSSIIETLQP 537 Query: 537 LLKKVWGKKPLVTVFINKISR 557 L + +KP++ I K++ Sbjct: 538 YLFEKTARKPMILPVIMKVNE 558 >gi|222148290|ref|YP_002549247.1| metal dependent hydrolase [Agrobacterium vitis S4] gi|221735278|gb|ACM36241.1| metal dependent hydrolase [Agrobacterium vitis S4] Length = 555 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 316/554 (57%), Positives = 413/554 (74%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYG+G P +R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KTDELVFLPLGGVGEIGMNLALYGFGPPKNREWIMVDCGVTFPGPDLPGVDLVLPDIRFV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ L AIFITHAHEDHYG L+D+W L+VPVYAS F G+LEAKR YE +IP Sbjct: 63 LSQKNRLKAIFITHAHEDHYGGLNDIWPGLNVPVYASGFTAGMLEAKRNYEGTRAEIPVT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ GDKV VG F +E+ VNHSIPE M+L+IR+P+GN++HTGDWK+D LG +TD+ Sbjct: 123 PFKPGDKVHVGPFVVEASDVNHSIPEPMSLIIRTPLGNVIHTGDWKIDHAPSLGPLTDEA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+G+EG+LA+MCDSTNAMREG SE+ + + + I++ A+G V +TTFSS+V RIR Sbjct: 183 RFRALGDEGVLAVMCDSTNAMREGVSPSEQEVSEGLRKIIQTAEGRVAITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE GR+++LLGSSLKRVV VA DVG+++ Q F++++ +G PR++++VI TGS Sbjct: 243 SIAKAAEAAGREVLLLGSSLKRVVGVARDVGLMEGVQPFIAEDEYGYIPRDKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+ALA+LSR EMRNV L + DTV+FSSRAIPGNE I IKN L+EQGV ++ + + Sbjct: 303 QGESRAALAKLSRDEMRNVALTKGDTVVFSSRAIPGNEKPINDIKNGLIEQGVTIVTD-S 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP N+L +MYQW RPQ+LV +HGE HL A ++LAL+ GIA VP VRNG + Sbjct: 362 DALVHVSGHPRRNELLQMYQWTRPQILVPVHGEAAHLTAQQKLALEAGIAQVPKVRNGDI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E+I E +G KDG L+G F +GI +RR+LSF GH+SV+VLLD + Sbjct: 422 LRLAPGPAEVIGEAPYGRVFKDGKLLGDFEQMGIGERRKLSFAGHVSVSVLLDERFEFRD 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE+V G+PA D +G + +L V++ V +P+ RRKDL LRESI A+RS + Sbjct: 482 DPEVVAHGLPAEDLEGDDMEDILYDAVLSAVESIPRTRRKDLGALRESIRRAVRSTANEC 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ K+ Sbjct: 542 WGKKPVVTVFVTKV 555 >gi|251781074|ref|ZP_04823994.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085389|gb|EES51279.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 554 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 172/560 (30%), Positives = 308/560 (55%), Gaps = 11/560 (1%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN+ +L +PLGG+GEIG N+ + YG + I+IDCG++FP +DL G+D++ PD+T Sbjct: 1 MKNKPKLKIIPLGGLGEIGKNITAFEYG----DEIIVIDCGLAFPDEDLYGIDIIIPDVT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ + + FITH HEDH G + + ++VPVYA+ + L+E+K + Sbjct: 57 YLIRNKNKVKGFFITHGHEDHIGGIPYILQQINVPVYATKLTLALIESKLEEHHMLNDCK 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G V + F++E +R NHSIP+ ++ + +P+G IVH+GD+K+D I G V + Sbjct: 117 LNLVEVGGSVKLKNFNVEFIRNNHSIPDACSIAMHTPMGVIVHSGDFKIDFTPIDGHVMN 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G +G+L LM DSTN + +G +SEK + + + + A G V+V+TF+S+V R Sbjct: 177 LQRYAELGKKGVLLLMADSTNVLHKGYTMSEKTVGETLNGLFSKATGRVIVSTFASNVHR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I D + + RKI G S++++ +A+++G + ++ +S + P +Q+ ++ Sbjct: 237 LQQISDCSIKNKRKIAFSGRSMEKISEIAMNLGYLSIPKEMIVSLDEIKNCPNDQITIVT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++ + +++ + D VI S+ IPGNE A+ ++ N L E+G VI Sbjct: 297 TGSQGESMAALSRIAASTHKYIEIQKGDMVIISASPIPGNEKAVSNLINDLTEKGANVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + E +HVSGH +L+ + ++P+ + +HGE HL+ H ++A GI + + Sbjct: 357 KTIE-DIHVSGHACEQELRVIQSLLKPKFFIPVHGEYKHLITHAKIAKSMGIEEDNIFIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + L + ++I +V G L DG IG ++ + R+ L+ G ++V + +D Sbjct: 416 DTGDVFELSKNKGKVIGKVPSGRVLIDGLGIGDVGNMVLRDRKNLAEDGIITVVIAIDRR 475 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+IV G Y + + + V V ++ I + Sbjct: 476 NKVILSGPDIVSRGF-VYVRNSEDLINNVRCIVTKVVEKCLDDNITQWAEIKNRIRREVD 534 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S + +KP++ I +I Sbjct: 535 SFVYTTMKRKPMILPVIVEI 554 >gi|126649564|ref|ZP_01721805.1| Zn-dependent hydrolase [Bacillus sp. B14905] gi|126593889|gb|EAZ87812.1| Zn-dependent hydrolase [Bacillus sp. B14905] Length = 556 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 186/559 (33%), Positives = 299/559 (53%), Gaps = 11/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L LGG+ EIG NM + Y I+IDCG FP + L G+DL+ PDIT++ Sbjct: 4 KKQLLSIFALGGINEIGKNMYVVQYA----DDMILIDCGAKFPDETLLGIDLIIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + A+ +TH HEDH G + L L+VPVYA+ F +GL+E K ++ ++ I Sbjct: 60 LENKEKVKALIVTHGHEDHIGGIPYLLKKLNVPVYATRFTLGLIELKLKEHKLLRESDLI 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A + +G + R NHSIP+ + +V+ +P GN+VHTGD+K D + D Sbjct: 120 EIHADSALHLGEIDVSFFRTNHSIPDCLGIVLATPEGNVVHTGDFKFDLTPVNNQFADIH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG++G+L L+ +STNA R G SE+ + +I + +A+ ++++TF+S+V+RI+ Sbjct: 180 KMAEIGSKGVLVLISESTNAERPGLTPSEQLVGHHIEEAFFHAERKIIISTFASNVNRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ RK+ LLG S+ VV VAI+ G + D L + P E+++V+ TG Sbjct: 240 QIVHATIAANRKLALLGRSMVNVVDVAIERGYLFVPDDLLIDAREVKYLPPEEVVVLCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+L+ G R VK+ D VI ++ IPGNE + I + L + G +VI Sbjct: 300 SQGEPLAALARLANGNHREVKVLPDDMVILAASPIPGNEKGVSRIVDHLFQLGAKVIYGS 359 Query: 361 AEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH Y DLK M +++PQ + IHGE L H+ LA G+ ++ Sbjct: 360 SNHTGMHVSGHGYQEDLKLMLTFMKPQFFIPIHGEFRMLHQHRLLAESVGVQKGHTFIMK 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ + + +V G DG IG+ + + R+QLS G L + + L Sbjct: 420 NGDVVDIENETARQTRKVPSGDTYVDGIGIGEVEGIVLRDRKQLSEDGMLVIVLTLSKAD 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+ + G + D ++ + +++L Q R + +LR I A+ Sbjct: 480 GAIISEPDTISRGF-VFAKDFEELLNKVNVLTKEIIIELQQESR-QIHVLRREIKKAVGQ 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L +KP++ I +I Sbjct: 538 YLFTQTKRKPMILPIIIEI 556 >gi|317056310|ref|YP_004104777.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] gi|315448579|gb|ADU22143.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] Length = 614 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 170/556 (30%), Positives = 288/556 (51%), Gaps = 12/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ EIG N + S +IDCG++FP ++ GVD+V PD T++ K Sbjct: 65 VKIIPLGGLNEIGKNFTVIE----CSNDMFVIDCGLAFPDSEMLGVDIVIPDFTYVEKNL 120 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + + ITH HEDH G L VPVY + +GL+E K + + + Sbjct: 121 EKMRGVVITHGHEDHIGGLPYFLKKFPGVPVYGTRLTVGLIEGKLREHGLLDSVKLNTVT 180 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G ++E +RVNHSIP+++ + I +P G ++HTGD+K+D I G + D Sbjct: 181 PRQTIRMGCMAVEFIRVNHSIPDSVGMAIHTPAGVLIHTGDFKVDYTPIEGGIIDLPRFA 240 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSI 243 +GN+G+LALM DSTN+ R G SE+ + N+ + A+G +++ TF+S++ R++ I Sbjct: 241 ELGNKGVLALMADSTNSERPGYTASERKVGDNLEMLFSKAEGKRIIIATFASNIHRVQQI 300 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A GRK+ + G S+ V+SV I++G +K D + + + G Y +Q++++ TGSQ Sbjct: 301 INNAVNTGRKVAVSGRSMVNVISVGIELGYLKVPDGVLIDIDMIGRYLPDQIVLVTTGSQ 360 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL+++S E R V + +D +I S+ IPGNE + + N L++ G V+ E Sbjct: 361 GEPMSALSRMSMNEHRKVSITPQDFIIISANPIPGNEKLVTRVVNDLMKLGAEVVYEKM- 419 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH + K M +P+ + +HGE HL+ HK+ A+ GI + G Sbjct: 420 YEVHVSGHACQEEQKLMLSITKPKFFIPVHGEFKHLMKHKQTAMSVGIPEENIIIAGIGD 479 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ ++I EV G L DG +G + + R+ L+ G + +D I Sbjct: 480 VIETDGVDMKITGEVPAGKVLVDGLGVGDVGAIVLRDRKHLAEDGLIIAVATIDRSVGEI 539 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++V G Y + ++ + + T+ + ++ + L + Sbjct: 540 LAGPDLVSRGF-VYVRESEELMNEAKELLTETLQSCLDSNMHEWNAIKGKMKDNLSDFIF 598 Query: 540 KVWGKKPLVTVFINKI 555 + P++ I +I Sbjct: 599 GKTKRSPMILPIIMEI 614 >gi|257066434|ref|YP_003152690.1| beta-lactamase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798314|gb|ACV28969.1| beta-lactamase domain protein [Anaerococcus prevotii DSM 20548] Length = 560 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 189/563 (33%), Positives = 298/563 (52%), Gaps = 12/563 (2%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M+N++ L +PLGG+ E+G N L YG IMIDCG++FP ++ GVD+V PD T Sbjct: 1 MQNDKKLRIIPLGGLQEVGKNCTLVEYG----NDMIMIDCGLTFPDAEMLGVDIVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + L IF+TH HEDH GA+ + VY S GLLE K ++ Sbjct: 57 YVEENKNKLRGIFVTHGHEDHIGAIPYFLKNIDTNVYCSKLTKGLLENKFKEHGLNPNKI 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V VG+ S E +RV+HSIP+ ++ ++SPVG ++ TGD+K+D I D TD Sbjct: 117 KMV-NVNNTVKVGSLSAEFIRVSHSIPDACSIAVKSPVGTVIFTGDFKMDFTPIDNDPTD 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G +G+LAL DSTN REG +SEK + I AK ++V TF+S++ R Sbjct: 176 IQRLAELGRKGVLALFADSTNVEREGYSLSEKTVGDTFIQIFGRAKSRIIVATFASNLHR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II AE+ +K+ L G S+ V +A ++G +K K + ++ Y ++++V++ Sbjct: 236 VQQIIYAAERYNKKVALSGRSMLNNVRIASELGYLKVKSNTLIDMKNIKNYADDEIVVLS 295 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP SAL +++ E + + L E DTVI SS AIPGNE+AI + N L + G ++I Sbjct: 296 TGTQGEPLSALTRMANREHKQINLNETDTVILSSSAIPGNEMAINNTINNLTKIGCKIIY 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 VH SGH ++K MYQ + P+ L+ HGE L H E+A G + Sbjct: 356 SSL-AKVHASGHACQEEIKLMYQLVTPKYLIPAHGEVRQLQKHAEIAEDMGQPKENILIG 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + I V G L DG IG ++ + R+ LS G + V++ D H Sbjct: 415 KNGDVYEFTKKHGAINGRVQAGNILVDGSGIGDVGNIVLKDRKHLSEDGLVVVSITFDKH 474 Query: 477 Y-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+IV G Y + I + V+ ++ + + ++ I L+ Sbjct: 475 TQQLLAGPDIVSRGF-VYVKENQDIIENAKDIVLRSIKKCADKEIRAISQIKYKIREDLK 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 S + G+ P++ I+++ Sbjct: 534 SYIYNELGRDPMILPVISELESN 556 >gi|296139477|ref|YP_003646720.1| beta-lactamase [Tsukamurella paurometabola DSM 20162] gi|296027611|gb|ADG78381.1| beta-lactamase domain protein [Tsukamurella paurometabola DSM 20162] Length = 650 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 297/561 (52%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + + LGG+ EIG NM ++ Y K +++DCGV FP+D PGVDL+ PD + Sbjct: 101 LRKGGMRVVALGGIKEIGRNMTVFEY----DGKLLIVDCGVLFPEDQQPGVDLILPDFRY 156 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I K++ AI +TH HEDH GA+ L +PV + F + L++AK R+ K+ Sbjct: 157 IEDRIKDVEAIVLTHGHEDHIGAVPFLLRLRPDIPVIGAKFTLALIKAKCDEHRLRPKL- 215 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + G+ G F E VNHSIP+ +A+ I + +HTGD KLD + G +TD Sbjct: 216 -IEVREGESTSHGPFECEYFAVNHSIPDAIAVAIHAGGQVALHTGDIKLDQLPLDGRLTD 274 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+ G+ + DSTNA G E+ I + +++ AKG V+V +F+S V R Sbjct: 275 LAGFSRLGDAGVDLFLVDSTNAEVPGFVTPEREIGPVLDNVIGRAKGRVIVASFASHVHR 334 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D+A R++V +G S+ R + +A D+G ++ + + + ++ P ++++++ Sbjct: 335 IQQIVDVAVAHNRRVVFVGRSMVRNMQIAQDMGYLRVPEGVEVDLDTAASLPDHRIVLVS 394 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++RGE RN+ ++ D V+ +S IPGNE ++ + N L + G V+ Sbjct: 395 TGSQGEPLSALSRMARGEHRNITISPHDLVVLASSLIPGNENSVFAVVNGLAKLGATVVT 454 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + + VHVSGH +L +Y +RP+ + +HGE HL A+ LA G+ + Sbjct: 455 QQS-AKVHVSGHASAGELLYLYNAVRPRNAMPVHGEWRHLRANAALAEATGVPKDRIMLA 513 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L +I+ +V G DG +G + ++ R L G +++++++D Sbjct: 514 EDGVVVDLIDGVAKIVGQVPVGHVYVDGSSVGDVGESTLSDRLVLGEGGFIAISIVIDEE 573 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N PE+ G D K + V T+ L KD + +++ A+ Sbjct: 574 GNSVTTPEVSGRGFS----DDPTALKEAEQLVEDTLAQLSSEGIKDQHRIAQAVRRAVGR 629 Query: 537 LLKKVWGKKPLVTVFINKISR 557 + + ++P++ + + Sbjct: 630 WVSNTYRRRPMIVPTVMVVGE 650 >gi|325479455|gb|EGC82551.1| hypothetical protein HMPREF9290_1338 [Anaerococcus prevotii ACS-065-V-Col13] Length = 560 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 192/563 (34%), Positives = 298/563 (52%), Gaps = 12/563 (2%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M+N++ L +PLGG+ E+G N + YG IMIDCG++FP ++ GVD+V PD T Sbjct: 1 MQNDKKLRIIPLGGLQEVGKNCTVVEYG----NDMIMIDCGLTFPDAEMLGVDIVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + +K L IF+TH HEDH GA+ + VY S GLLE K ++ Sbjct: 57 YVEENKKKLKGIFVTHGHEDHIGAIPYFLKNIDTNVYCSKLTKGLLENKFKEHGLNPNKI 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V G+ S E +RV+HSIP+ ++ ++SPVG ++ TGD+K+D I D TD Sbjct: 117 KMV-NVNNTVKAGSLSCEFIRVSHSIPDACSIAVKSPVGTVIFTGDFKMDFTPIDNDPTD 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G +G+LAL DSTN REG +SEK + I AK ++V TF+S++ R Sbjct: 176 IQRLAELGKKGVLALFADSTNVEREGYSVSEKTVGDTFIQIFGRAKSRIIVATFASNLHR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II AE+ +K+ L G S+ V +A D+G +K K+ + +S Y ++++V++ Sbjct: 236 VQQIIYAAERYNKKVALSGRSMLNNVRIASDLGYLKIKNNTIIDMKSIKNYADDEIVVLS 295 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP SAL +++ E + + L E DTVI SS AIPGNE+AI + N L + G ++I Sbjct: 296 TGTQGEPLSALTRMANREHKQINLNETDTVILSSSAIPGNEMAINNTINNLTKIGCKIIY 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 VH SGH ++K MYQ P+ L+ HGE L H E+A G + Sbjct: 356 SSL-AKVHASGHACQEEIKLMYQLTTPKYLLPAHGEVRQLQKHAEIAEDMGQPKENILIG 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + I V G L DG IG ++ + R+ LS G + V++ D H Sbjct: 415 KNGDVYEFTKKSGTINGRVQAGNILVDGSGIGDVGNIVLKDRKHLSEDGLMVVSITFDKH 474 Query: 477 Y-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEIV G Y + I + VI ++ + + ++ I L+ Sbjct: 475 TQQLLAGPEIVSRGF-VYVKENQDIIENAKDVVIRSIKRCADKDIRAISQIKYKIREDLK 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 S + G+ P++ I+++ Sbjct: 534 SYIYNELGRDPMILPVISELETN 556 >gi|323440638|gb|EGA98348.1| hypothetical protein SAO11_0490 [Staphylococcus aureus O11] Length = 565 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 287/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GEIG N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHPNEVGVYALGGLGEIGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T +++ + ++ +FITH HEDH G + L L++P+Y P A+GL+ K + + Sbjct: 57 YTHLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F+I HSIPET +++ +P G +VHTGD+K D + Sbjct: 117 AKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVG-KP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L Q + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + +KP++ I K++ Q+ Sbjct: 535 LQPYLFEKTARKPMILPVIMKVNEQK 560 >gi|258593357|emb|CBE69696.1| Ribonuclease J 1 (RNase J1) [NC10 bacterium 'Dutch sediment'] Length = 548 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 186/554 (33%), Positives = 307/554 (55%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIG+NM + + ++ID G+ FP +++ G+D V PD+++++ R Sbjct: 1 MRIVPLGGLGEIGLNMTVVE----TEDDLLVIDAGLMFPDEEMFGIDHVIPDMSYLLARR 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +TH HEDH GAL L + + VPVY + ++GL K + + + + Sbjct: 57 AQIRAVLLTHGHEDHTGALPYLLNEIKVPVYGTRLSLGLAAEKLKEANLLPYVDLKAVRP 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D + G F++E +++ HSIP+ +AL I +P G IVHTGD+K D + +TD L Sbjct: 117 RDCLQFGCFNVEFLQICHSIPDGLALAIGTPRGMIVHTGDFKFDQSPVDVQLTDYRRLAE 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G+ G+LAL+ DSTNA R+G SE+ + + + I ++A+G V+V F+S++ RI+ I D Sbjct: 177 LGDGGVLALLSDSTNAGRDGFTPSEQVVGRALDAIFRDAQGRVIVACFASNIHRIQQIFD 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A +G+++ + G S+ +A ++G ++ D +S + P + +++ TGSQGE Sbjct: 237 AAAAMGKRVAVCGKSMVANTRIAAELGRLRIPDDTLVSLDDLERLPVGRRVIVTTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SA+A+++ E + V+++ DTVIFS+RAIPGNE +I N L QG RVI E+ Sbjct: 297 PLSAIARMAVAEHKQVQVSPGDTVIFSARAIPGNERSIARTINGLYRQGARVITEEV-AE 355 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 VHVSGH +LK M IRP V IHGE HL H +LA + G+ + +G +L Sbjct: 356 VHVSGHASREELKLMLNLIRPTFFVPIHGEYRHLRLHAQLAREVGVPEARTLVIEDGDIL 415 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 D I + G DG IG D + R++L+ G + V + +D H + Sbjct: 416 EFDGDGARIAGKAPVGRIFVDGKGIGDVGDAVLRDRQRLAQEGVVIVVLAVDRHCRKLVT 475 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I G + D + + V + + P+ DL+L+ + I +A+R L+K Sbjct: 476 EPRIAYSGF-VHAQDSKALTDSMKTLVCSVLESAPEEDLADLRLIEQRIKTAIRKQLQKE 534 Query: 542 WGKKPLVTVFINKI 555 ++P++ I ++ Sbjct: 535 IERRPMILSVIMEV 548 >gi|239636408|ref|ZP_04677410.1| ribonuclease J 1 [Staphylococcus warneri L37603] gi|239597763|gb|EEQ80258.1| ribonuclease J 1 [Staphylococcus warneri L37603] Length = 562 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 171/566 (30%), Positives = 284/566 (50%), Gaps = 13/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHQNEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHNLLRI 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 AQLNEINEDSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAKLGEEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAVKHNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPGKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E + G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVDCGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ + + L Q + ++ SI Sbjct: 475 FNTNTLLSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNQNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ L + ++P++ I K++ + Sbjct: 535 LQPYLFEKTARRPMILPVIMKVNEDK 560 >gi|172058022|ref|YP_001814482.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171990543|gb|ACB61465.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 555 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 288/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N + + + I+ID GV FP+D+L G+D V PD T++ Sbjct: 5 KNHQAAVFALGGLGEIGKNTYVVQF----QDEIIVIDAGVMFPEDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + +FITH HEDH G L L +++P+YA A+GL++ K + + Sbjct: 61 IKNKDKVKGVFITHGHEDHIGGLPFLLKQVNLPIYAGKIALGLIKVKLEEHGLLRTAELH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + SI R HSIP + +V+++P GNIVHTGD+K D + + D Sbjct: 121 EIDEDSIIKFRKTSISFFRTTHSIPNSFGVVVKTPQGNIVHTGDFKFDFTPVG-EPADLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+L L+ DSTNA EG +SE+ + I +I + A+G ++ TF+S++ R++ Sbjct: 180 KMAELGKEGVLCLLSDSTNAEIEGFTMSERVVGDTISNIFRKAEGRIIFATFASNIYRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ + + GRKIV+ G S+ +V+ + ++ IK + Y +L ++ TG Sbjct: 240 QVVNASVEAGRKIVVFGRSMDKVMMIGQELDFIKAPKGTIIEPNEMKRYKSNELTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + D VIFSS IPGN V++G N+L + G V+ Sbjct: 300 SQGEPMAALSRIANGTHRQISIIPDDLVIFSSSPIPGNVVSVGKTINQLYKAGADVMYGK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + M + ++P+ + IHGE L H LA+ G+ + N Sbjct: 360 LN-DIHTSGHGSQQEQLLMLRLLQPKYFMPIHGEYRMLKKHMSLAMDAGVPEENCFVMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G++L L + I ++ DG IG ++ + RR LS G + V V LD+ N Sbjct: 419 GEVLALDANAAAITGKIQANAVYVDGKGIGDIGNIVLRDRRILSEEGLVVVVVTLDSKTN 478 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + K + + ++ R +++ I+ L Sbjct: 479 RLVSGPDIISRGF-VYMRESGNLIKDAERLLKRSLEQSLANRNTKWTDIKQVINDTLTPY 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 538 LTEKTQRHPMIMPIIMEV 555 >gi|188587868|ref|YP_001920895.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E3 str. Alaska E43] gi|188498149|gb|ACD51285.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E3 str. Alaska E43] Length = 554 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 307/560 (54%), Gaps = 11/560 (1%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN+ +L +PLGG+GEIG N+ + YG + ++IDCG++FP +DL G+D++ PD+T Sbjct: 1 MKNKPKLKIIPLGGLGEIGKNITAFEYG----DEIVVIDCGLAFPDEDLYGIDIIIPDVT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ + + FITH HEDH G + + ++VPVYA+ + L+E+K + Sbjct: 57 YLIRNKNKVKGFFITHGHEDHIGGIPYILQQINVPVYATKLTLALIESKLEEHHMLNDCK 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G V + F++E +R NHSIP+ ++ + +P+G IVH+GD+K+D I G V + Sbjct: 117 LNLVEVGGSVKLKNFNVEFIRNNHSIPDACSIAMHTPMGVIVHSGDFKIDFTPIDGHVMN 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G +G+L LM DSTN + +G +SEK + + + + A G V+V+TF+S+V R Sbjct: 177 LQRYAELGKKGVLLLMADSTNVLHKGYTMSEKTVGETLNGLFSKATGRVIVSTFASNVHR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIA 298 ++ I D + + RKI G S++++ +A+++G + + + S + P +Q+ ++ Sbjct: 237 LQQISDCSIKNKRKIAFSGRSMEKISEIAMNLGYLSIPKEMIVSLDEIKNCPNDQITIVT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++ + +++ + D VI S+ IPGNE A+ ++ N L E+G VI Sbjct: 297 TGSQGESMAALSRIAASTHKYIEIQKGDMVIISASPIPGNEKAVSNLINDLTEKGANVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + E +HVSGH +L+ + ++P+ + +HGE HL+ H ++A GI + + Sbjct: 357 KTIE-DIHVSGHACEQELRVIQSLLKPKFFIPVHGEYKHLITHAKIAKSMGIEEDNIFIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + L + ++I +V G L DG IG ++ + R+ L+ G ++V + +D Sbjct: 416 DTGDVFELSKNKGKVIGKVPSGRVLIDGLGIGDVGNMVLRDRKNLAEDGIITVVIAIDRR 475 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+IV G Y + + + V V ++ I + Sbjct: 476 NKVILSGPDIVSRGF-VYVRNSEDLINNVRCIVTKVVEKCLDDNITQWAEIKNRIRREVD 534 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S + +KP++ I +I Sbjct: 535 SFVYTTMKRKPMILPVIVEI 554 >gi|242242394|ref|ZP_04796839.1| metallo-beta-lactamase [Staphylococcus epidermidis W23144] gi|242234150|gb|EES36462.1| metallo-beta-lactamase [Staphylococcus epidermidis W23144] Length = 560 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 172/566 (30%), Positives = 285/566 (50%), Gaps = 13/566 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAVEY----KDEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 TELHEIDESSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G+EG+L L+ DSTNA+ +SE+ + +N+ I +N KG ++ +F+S++ Sbjct: 176 ANIAKMAQLGHEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFASFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINSVPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH E +Q G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGETGVQCGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N + P+I+ G G I+ K + L + ++ SI Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKGDVISKLNSNKDIQWHQIKSSIIET 534 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + +KP++ I K++ + Sbjct: 535 LHPYLYEKTARKPMILPVIMKVNEDK 560 >gi|169825865|ref|YP_001696023.1| Zn-dependent hydrolase [Lysinibacillus sphaericus C3-41] gi|168990353|gb|ACA37893.1| Zn-dependent hydrolase [Lysinibacillus sphaericus C3-41] Length = 556 Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 187/559 (33%), Positives = 298/559 (53%), Gaps = 11/559 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L LGG+ EIG NM + Y I+IDCG FP + L G+DL+ PDIT++ Sbjct: 4 KKQLLSIFALGGINEIGKNMYVVQYA----DDMILIDCGAKFPDETLLGIDLIIPDITYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + A+ +TH HEDH G + L L+VPVYA+ F +GL+E K ++ ++ I Sbjct: 60 LENKEKVKALIVTHGHEDHIGGIPYLLKKLNVPVYATRFTLGLIELKLKEHKLLRETDLI 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A + +G + R NHSIP+ + +V+ +P GN+VHTGD+K D + D Sbjct: 120 EIHADSALHLGEIDVSFFRTNHSIPDCLGIVLATPEGNVVHTGDFKFDLTPVNNQFADIH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG++G+L L+ +STNA R G SE+ + +I + +A+ ++++TF+S+V+RI+ Sbjct: 180 KMAEIGSKGVLVLISESTNAERPGLTPSEQLVGHHIEEAFFHAERKIIISTFASNVNRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ RK+ LLG S+ VV VAI+ G + D L + P E+++V+ TG Sbjct: 240 QIVHATIAANRKLALLGRSMVNVVDVAIERGYLFVPDDLLIDAREVKYLPPEEVVVLCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE- 359 SQGEP +ALA+L+ G R VK+ D VI ++ IPGNE + I + L + G +VI Sbjct: 300 SQGEPLAALARLANGNHREVKVLPDDMVILAASPIPGNEKGVSRIVDHLFQLGAKVIYGS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH Y DLK M +++PQ + IHGE L H+ LA G+ ++ Sbjct: 360 SSHTGMHVSGHGYQEDLKLMLTFMKPQFFIPIHGEFRMLHQHRLLAEAVGVQKGHTFIMK 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG ++ + +V G DG IG+ + + R+QLS G L + + L Sbjct: 420 NGDVVDIENAVARQTRKVPSGDTYVDGIGIGEVEGIVLRDRKQLSEDGMLVIVLTLSKAD 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+ + G Y D ++ + +++L Q R + +LR I A+ Sbjct: 480 GAIISEPDTISRGF-VYAKDFEELLNKVNVLTKEIIMELQQESR-QIHVLRREIKKAVGQ 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L +KP++ I +I Sbjct: 538 YLFTKTKRKPMILPIIIEI 556 >gi|227499545|ref|ZP_03929652.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus tetradius ATCC 35098] gi|227218304|gb|EEI83558.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus tetradius ATCC 35098] Length = 568 Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 189/563 (33%), Positives = 297/563 (52%), Gaps = 12/563 (2%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M+N++ L +PLGG+ E+G N L YG IMIDCG++FP ++ GVD+V PD T Sbjct: 9 MQNDKKLRIIPLGGLQEVGKNCTLVEYG----NDMIMIDCGLTFPDAEMLGVDIVIPDFT 64 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + L IF+TH HEDH GA+ + VY S GLLE K ++ Sbjct: 65 YVEENKNKLRGIFVTHGHEDHIGAIPYFLKNVDTNVYCSKLTKGLLENKFKEHGLNPNKI 124 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V G+ S E +RV+HSIP++ A+ ++SP+G ++ TGD+K+D I D TD Sbjct: 125 KMV-NVNNTVKAGSLSAEFIRVSHSIPDSCAIAVKSPIGTVIFTGDFKMDFTPIDNDPTD 183 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G +G+LAL DSTN REG +SEK + I AK ++V TF+S++ R Sbjct: 184 IQRLAELGKKGVLALFADSTNVEREGYSLSEKTVGDTFIQIFGRAKSRIIVATFASNLHR 243 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II AE+ +K+ L G S+ V +A ++G +K K + ++ Y ++++V++ Sbjct: 244 VQQIIYAAERYNKKVALSGRSMLNNVRIASELGYLKIKSNTIIDMKNIKNYADDEIVVLS 303 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP SAL +++ E + + L E DTVI SS AIPGNE+AI + N L + G ++I Sbjct: 304 TGTQGEPLSALTRMANKEHKQINLNETDTVILSSSAIPGNEMAINNTINNLTKIGCKIIY 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 VH SGH ++K MYQ P+ L+ HGE L H E+A G + Sbjct: 364 SSL-AKVHASGHACQEEIKLMYQLTTPKYLIPAHGEVRQLQKHAEIAEDMGQAKENILIG 422 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + I V G L DG IG ++ + R+ LS G + V++ D H Sbjct: 423 KNGDVYEFTKKTGAINGRVQAGNILVDGSGIGDVGNIVLKDRKHLSEDGLMVVSLTFDKH 482 Query: 477 Y-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEIV G Y + I + V+ ++ + + ++ I L+ Sbjct: 483 TQQLLAGPEIVSRGF-VYVKENQDIIENAKDVVLRSIKKCSDKDIRAISQIKYKIREDLK 541 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 S + G+ P++ I+++ Sbjct: 542 SYIYNELGRDPMILPVISELESN 564 >gi|153854405|ref|ZP_01995683.1| hypothetical protein DORLON_01678 [Dorea longicatena DSM 13814] gi|149752931|gb|EDM62862.1| hypothetical protein DORLON_01678 [Dorea longicatena DSM 13814] Length = 547 Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 177/556 (31%), Positives = 298/556 (53%), Gaps = 15/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ +IGMN+ + Y I++DCG+SFP++D+ G+DLV PD+T++ Sbjct: 1 MRIIPLGGLEKIGMNITAFEY----EDSIIVVDCGLSFPEEDMLGIDLVIPDVTYLKDNI 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH GAL + L++P+YA+ +G++E K + + + Sbjct: 57 QKVKGFVITHGHEDHIGALPYILRELNLPIYATKLTMGIIEKKLTEHNLLRSTRRKVVRH 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 117 GQSINLGQFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVYGDAIDLQRFAE 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 IG +G+LALM DSTNA R G SE+ + I K +++ TF+S+V R++ II Sbjct: 177 IGKKGVLALMSDSTNAERPGFTQSERTVGITFDHIFAEHKDTRIIIATFASNVDRVQQII 236 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A + RK+V+ G S+ ++ VA ++G + D+ + + YP E+ ++I TGSQG Sbjct: 237 NTACKYDRKVVVEGRSMVNIIQVAQELGYLNVPDKTLIEIDQLKNYPPEKTVLITTGSQG 296 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ + V + DT+IFSS IPGNE ++ + N L +G VI + Sbjct: 297 ESMAALSRMAADVHKKVTIMPGDTIIFSSNPIPGNEKSVSKVINELTAKGANVIFQ---- 352 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 HVSGH +LK +Y ++P+ + +HGE HL A+ +A GI + +++G + Sbjct: 353 DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGIAKMLGIPKENIFILKSGNV 412 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L L +++D V G L DG +G ++ + R+ L+ G + V + L+ + Sbjct: 413 LELSDKEAKVVDNVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVLTLEKGSNQLL 472 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLK 539 P+IV G Y + + + K + V D +R D ++ I + + Sbjct: 473 AGPDIVSRGF-VYVRESESLMEEARKVLTEAVEDCLTHQRNADWSKIKLVIRDTMNDFIW 531 Query: 540 KVWGKKPLVTVFINKI 555 K ++P++ I + Sbjct: 532 KRTKRRPMILPIIMDV 547 >gi|229189800|ref|ZP_04316812.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228593664|gb|EEK51471.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] Length = 557 Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 280/558 (50%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N++L LGGV EIG NM + Y S ++I CG FP + L G+DL+ PD+T++ Sbjct: 5 NDKLSIFALGGVNEIGKNMYVIQY----SDDIVIIVCGSKFPDESLLGIDLIIPDVTYLQ 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +TH HEDH G + L+VP+YA+ +GL+ + ++ I Sbjct: 61 ENKDKIRGLIVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLISIELKEHKLQDSTQLIV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G ++ + NHSIP+ + + +P G +VHTGD+K D I D Sbjct: 121 IDSESLIEFGKINLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPINKQYPDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+ GILAL+ +STNA R G SE+ + + I + A V+++TF+S+V+R++ Sbjct: 181 MANIGSNGILALLSESTNAERSGFTPSERLVGEKIEEAFVKAHRKVIISTFASNVNRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I+D A + RK+ LLG S+ VVSVA++ G + + + + E++ ++ TGS Sbjct: 241 IVDAALKTNRKLALLGRSMVNVVSVALEQGYLNIPEGMLIEANEINQMEPEKVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++LS G R V + DTVI S+ IPGNE + I + L G VI Sbjct: 301 QGEPMAALSRLSSGNYRQVDILPGDTVILSASPIPGNERNVSRIIDNLFLLGATVIYGSG 360 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH Y +LK M ++P+ + IHGE L H++LA G+ + + N Sbjct: 361 SSTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHRQLAESVGVKKDNIYVISN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + G DG IG + + R+QLS G L + + L Sbjct: 421 GDVVDIKNQTAIQTRRITAGNIYVDGLGIGDVGNTLLRDRKQLSEDGMLVIVITLSKTEE 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+ + G Y D + V+ TV L + +L+ I L Sbjct: 481 KIISGPDTISRGF-VYVRDSEDFLNKTNQLVVETVNRLQKAHINQWNVLKREIRETLGHF 539 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 540 IYSHTKRKPMILPIIIEV 557 >gi|288556353|ref|YP_003428288.1| Zn-dependent hydrolase [Bacillus pseudofirmus OF4] gi|288547513|gb|ADC51396.1| Zn-dependent hydrolase [Bacillus pseudofirmus OF4] Length = 557 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 176/552 (31%), Positives = 297/552 (53%), Gaps = 10/552 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++L LGG+ E+G NM + YG ++ +++DCG FP + L G+DL+ PDI + Sbjct: 3 MNGDQLSVYALGGLHEVGKNMYVIEYG----QEIVVVDCGNKFPDETLLGIDLIIPDIQY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + A+ +TH HEDH G + L+VPVYA+ F +GL+E K ++ ++ Sbjct: 59 LIENQERVKALIVTHGHEDHIGGIPFFLKKLNVPVYATRFTLGLIELKLTEHKILRETEL 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I A + IE +VNHSIP+ + +V R+P G IVHTGD+K D + +D Sbjct: 119 IEILADSVITFEEIKIEFFKVNHSIPDCLGIVFRTPEGTIVHTGDFKFDLTPVNQQHSDI 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ +STNA R G SE+ + ++ +A+G V V+TF+S+VSR+ Sbjct: 179 HRMAEIGKKGVLLLLSESTNAERPGLTPSEQMVGHHLEKAFMDAEGKVFVSTFASNVSRV 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++ A RK+ L+G S+ VV VAI+ G + D++ + + +P E++ ++ T Sbjct: 239 QQVVQAAILTNRKLALIGRSMVNVVGVAIERGYLAVPDEMLIDQKQINDFPPEKVAILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++LS G R V + DTVI ++ IPGNE ++ I + L G VI Sbjct: 299 GSQGEPMAALSRLSTGNFRGVDVLHGDTVILAAGPIPGNERSVTTIVDNLFALGANVIYG 358 Query: 360 D-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH Y DLK M ++RP+ + IHGE L H++LA G+ + Sbjct: 359 SGVTTGMHVSGHGYQEDLKLMLSFMRPKYFIPIHGEYRMLYKHQQLAESVGVQEGHTFIL 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +NG ++ + +V G DG +G +L + R+QLS G L V + + Sbjct: 419 KNGDVVDIKNQEARQTRKVHAGHTYVDGMGVGDVGNLILRDRKQLSEDGMLVVVLTMSKT 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+ + G Y + + + + ++ +L + + + K +++ I ++ Sbjct: 479 KKELISDPDTISRGF-VYVKESEALMNEVNHRIKQSLAELREENKMEWKAIKQQIKKSVG 537 Query: 536 SLLKKVWGKKPL 547 L +KP+ Sbjct: 538 EFLFSKTKRKPM 549 >gi|169334464|ref|ZP_02861657.1| hypothetical protein ANASTE_00867 [Anaerofustis stercorihominis DSM 17244] gi|169259181|gb|EDS73147.1| hypothetical protein ANASTE_00867 [Anaerofustis stercorihominis DSM 17244] Length = 621 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 174/556 (31%), Positives = 295/556 (53%), Gaps = 13/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L +PLGG+GEIG N+ ++ + +++DCG+ FP +D+ G+D+V P+ T++++ Sbjct: 72 KKLKVIPLGGLGEIGKNLTVFE----TEDDIVIVDCGLKFPDEDMYGIDIVIPEFTYLIE 127 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + +FITH HEDH GA+ L +++P+Y + IGLL+ K + + Sbjct: 128 NRHKIRGLFITHGHEDHIGAIPYLLKQINIPIYGTKLTIGLLKRKLTEHGLDESAKLHIV 187 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G V + FS+E V NHSIP++ AL I+S G + HTGD+K+D + D + Sbjct: 188 KQGHIVKIKGFSVEFVTSNHSIPDSCALYIKSNCGTVFHTGDFKVDYTPVDNQQIDLQRM 247 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSSSVSRIRS 242 AIG EG+ L+ DSTNA REG SE + K + K A +++ TF+++V R++ Sbjct: 248 AAIGAEGVDLLIADSTNAEREGHAKSEASVGKTFNTLFKEGANKRIILATFATNVHRVQQ 307 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGS 301 + D A++ RK+ + G S+ V+ VA ++ + D + + Y EQ++++ TGS Sbjct: 308 VFDAAKKFKRKVAISGRSMVNVIGVAKELKYLKFNDNIMIELNDVDNYAPEQVVILTTGS 367 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ GE R K+ +D VI S+ IPGNE + + N L E G V+ + A Sbjct: 368 QGEPMAALSRMANGEHRQFKITNEDYVIISATPIPGNEKTVADVINNLFELGADVVYQGA 427 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 E +HVSGH +LK M+ I+P+ + HGE L HK+LA++ + ++NG Sbjct: 428 EG-IHVSGHAQKEELKLMHSIIKPKYFMPAHGEYKMLSKHKDLAMELGMKEENIFVMKNG 486 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L + D ++ E +GL + DG IG ++ + R++LS G V V L + Sbjct: 487 DILEI-GDKAKVNGEAPNGLIMIDGLGIGDVGNIVLKDRKKLSEDGLFVVVVSLTKE-RV 544 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P IV G Y + ++ + + R D ++ + L L Sbjct: 545 VSGPGIVSRGF-VYMRESEELLNGAKDIAKKVLNKY-KDRLFDYNSIKADMKYELEKYLY 602 Query: 540 KVWGKKPLVTVFINKI 555 ++P++ + + Sbjct: 603 DNTKRRPMILPILMYV 618 >gi|89895122|ref|YP_518609.1| hypothetical protein DSY2376 [Desulfitobacterium hafniense Y51] gi|89334570|dbj|BAE84165.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 552 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 185/557 (33%), Positives = 293/557 (52%), Gaps = 12/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L +PLGG GEIG N+ ++ YG I+ID GV FP D+L G+DLV PDI ++ K Sbjct: 1 MKLSIIPLGGTGEIGKNLLVFEYG----DSIIVIDGGVKFPDDELLGIDLVIPDIIYLEK 56 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IFITH HEDH G L L L VPVY + +GL+ AK + Sbjct: 57 RKHKIQGIFITHGHEDHIGGLPFLLPKLEVPVYGTKLTMGLVRAKLRERGGYPEDLLRVI 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G+ V F +E+ RV HSIP+ + I +P+G +++TGD+K+D I G D L Sbjct: 117 DPGEPVKAKDFQVEAFRVTHSIPDAVGYGILTPLGRVIYTGDFKVDYTPIDGQEMDLGRL 176 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 A G EG+LAL+CDSTNA R G+ ISEK + K + D A+G +++ TF+S+V RI+ Sbjct: 177 AAWGQEGVLALLCDSTNAERSGSTISEKVVGKTLMDAFSRAEGKIIMATFASNVHRIQQA 236 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 ++ A + RK+ ++G S++ VV+ A ++G + + + S +L+++ TGS Sbjct: 237 LEAAALLKRKVCVVGRSMEAVVATARELGYLHLPDPDMLIETSSVNDISPSRLLILTTGS 296 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL +++ G R V ++ DTV+ S+ +PGNE IG N L + G VI +D Sbjct: 297 QGEPLAALTRMATGSHRQVNVSAGDTVVISATPVPGNEKLIGRTINHLFQIGADVITKDM 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH ++K + + RP+ L+ HGE H +A +++ G + + G Sbjct: 357 -GLVHVSGHANQEEIKLIIRLTRPKFLIPHHGEVRHQMAFRKIGNLMGYDDKKIAITQIG 415 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH--Y 477 + L D +E + V G DG IG + + R+QLS G + V L Sbjct: 416 TRVLLDTDKMECAERVESGSVFVDGLGIGDVGQIVLRDRQQLSQDGVVVVVAALSKGSPT 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G + + ++ + + V ++ R + +LR SI +L Sbjct: 476 TLVSGPDIISRGF-TFMKEAEELVEGAKRVVAASIETQINKERWEWGVLRGSIHESLSQY 534 Query: 538 LKKVWGKKPLVTVFINK 554 L ++P++ + + Sbjct: 535 LWDKTRRRPMILPVLLQ 551 >gi|225181408|ref|ZP_03734852.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167989|gb|EEG76796.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 569 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 171/541 (31%), Positives = 286/541 (52%), Gaps = 11/541 (2%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM Y + ++ID G++FP D++ G+D+V PDIT++++ + + I +TH HE Sbjct: 36 KNMYAIRY----ENEILVIDSGLAFPGDEMLGIDVVIPDITYLVENKDKIKGIVLTHGHE 91 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH G L L VPVY + +GL+E K + + DK+ +G F +E Sbjct: 92 DHIGGLPYTLPQLDVPVYGTKLTLGLVERKLREHHILGDCTLNVVRPEDKLQLGVFKVEF 151 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 R NHSIP+++ + +++PVG IVHTGD+K D + TD L +G +G+LA+ DS Sbjct: 152 FRTNHSIPDSVGIAVKTPVGTIVHTGDFKFDQTPVNDKPTDYHRLSKLGEKGVLAM-SDS 210 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 TNA R G +SEK + +I +I + AK +++ TF+S++ RI+ +ID A RK+ ++G Sbjct: 211 TNAERPGYTLSEKEVGASIMEIFRTAKQRIILATFASNIHRIQQVIDAACHYNRKVAVVG 270 Query: 259 SSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S+ VV VA ++G +K + + + P + ++I TGSQGEP SAL ++++ E Sbjct: 271 RSMVNVVQVAQELGYLKVCNGTLVEVDELRSMPPNKAVIITTGSQGEPMSALTRIAKAEH 330 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 R V++ DTV+ ++ IPGNE + + L +G VI E VHVSGH +LK Sbjct: 331 RKVEIIPGDTVVIAATPIPGNEKLVSRTIDNLFARGANVIYERV-SGVHVSGHASQEELK 389 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEV 435 M +RP+ L+ +HGE HL+ H ++A + GI V NG++L + V Sbjct: 390 LMLNMLRPKYLIPVHGEHRHLIHHAKVAEKVGIKPDNVFIAENGQILEFTQKSGRVAGSV 449 Query: 436 VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFGVPEIVDIGIPAYD 494 G L DG +G + + R+ LS G L V + ++ + PEI G Y Sbjct: 450 TSGRILVDGLGVGDVGSIVLRDRKLLSEDGILIVALTVNKETSQVVSGPEIYSRGF-VYV 508 Query: 495 GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + + + + V T+ ++ D +++ + +L + + ++P++ + + Sbjct: 509 RESETLMEEAREHVTKTLNKAVNGKKTDWSVVKNQVKDSLSRFVWEKMHRRPMILPVVME 568 Query: 555 I 555 I Sbjct: 569 I 569 >gi|167757703|ref|ZP_02429830.1| hypothetical protein CLOSCI_00033 [Clostridium scindens ATCC 35704] gi|167664585|gb|EDS08715.1| hypothetical protein CLOSCI_00033 [Clostridium scindens ATCC 35704] Length = 555 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 181/564 (32%), Positives = 301/564 (53%), Gaps = 18/564 (3%) Query: 1 MKNE---ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E +L +PLGG+ +IGMN+ + Y I++DCG++FP+DD+ G+DLV PD Sbjct: 1 MKKENNGKLRIIPLGGLEKIGMNITAFEY----EDSIIVVDCGLAFPEDDMLGIDLVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++ + + ITH HEDH GAL + +++P+YA+ +G++E K + + Sbjct: 57 ITYLKDNIQKVKGFVITHGHEDHIGALSYVLREMNLPIYATKLTMGIIEKKLTEHNLMRS 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD Sbjct: 117 TRRKVVRHGQSINLGQFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSS 236 D IG +G+LALM DSTNA R+G SE+ + I + +++ TF+S+ Sbjct: 177 IDLQRFAEIGKKGVLALMSDSTNAERKGFTQSERTVGITFDHIFAEHQNTRIIIATFASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ A + RK+V+ G S+ ++ VA ++G + D+ + + YP E+ + Sbjct: 237 VDRVQQIINSACKYDRKVVVEGRSMVNIIQVARELGYLNVPDKTLIEIDQLRNYPPEKTV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE +AL++++ + V + DTVIFSS IPGNE ++ + N L +G Sbjct: 297 LITTGSQGESMAALSRMAADVHKKVTIMPGDTVIFSSNPIPGNEKSVSKVINELSAKGAN 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 VI + HVSGH +LK +Y ++P+ + IHGE H A+ LA GI + Sbjct: 357 VIFQ----DAHVSGHACQEELKLIYSLVKPKYAIPIHGEYRHRKANAALAENLGIPKENI 412 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + +G + + +++D+V G L DG +G ++ + R+ L+ G L V + L Sbjct: 413 FILNSGDVFEVSDKEAKVVDKVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLTL 472 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESIS 531 + + P+IV G Y + + + + + V D +R D ++ I Sbjct: 473 EKGSNQLLAGPDIVSRGF-VYVRESEGLMEEARQVLQDAVEDCLMHQRNADWSKIKLVIR 531 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 + + K +KP++ I + Sbjct: 532 DTMNEFIWKRTKRKPMILPIIMDV 555 >gi|308067474|ref|YP_003869079.1| hypothetical protein PPE_00687 [Paenibacillus polymyxa E681] gi|305856753|gb|ADM68541.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 556 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 293/558 (52%), Gaps = 10/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L+ LGGV EIG NM Y + ++IDCG FP ++LPG+DL+ PD+T+++ Sbjct: 4 DNRLLIAALGGVNEIGKNMYFIQY----DQDIVVIDCGSKFPDENLPGIDLIVPDVTYLL 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + A+ +TH HEDH G + L +++PVY + I L++ K + + Sbjct: 60 ENQDKVRALIVTHGHEDHIGGIPYLLKQINMPVYGTKLTIELIKIKLREHNLLRDAELHL 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A V G HSIP+ + + ++P GN+VHTGD+K D + G D Sbjct: 120 IDADSTVQAGTIQASFFTTVHSIPDCLGVFFQTPEGNVVHTGDFKFDMSPVSGPFPDLHR 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+ L+ +STNA R G SE+ + +I D AK V ++TF+S+V+R++ Sbjct: 180 MAEIGKQGVKVLLSESTNAERPGFTPSERLVGGHILDAFARAKQQVFISTFASNVNRVQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +ID A + GRK+VLLG S+ VVSVA ++G + + L + +P E++ V+ TGS Sbjct: 240 VIDAAVETGRKLVLLGRSMINVVSVAKELGFLHMPEDLLIEAGETERFPAEEIAVLCTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED- 360 QGEP +AL++L+ +++ DTVI ++ AIPGNE + + + L G VI Sbjct: 300 QGEPMAALSRLANSLHPRIEILPGDTVIIAAGAIPGNERNLSQVIDNLYVLGANVIYGSG 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + +HVSGH +LK M ++P+ L+ IHGE L H++LA + V V N Sbjct: 360 STTGMHVSGHGSQEELKLMMTLMKPEYLIPIHGEFRMLYQHRQLAESVGIPMENVFIVHN 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G +++ + +V G L DG + G ++ + R++LS G L + + L Sbjct: 420 GDTVQIEEGRASLGPKVSAGNSLVDGLVTGDVGNIVLRDRKKLSSDGMLIIVMTLSKNEK 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE++ G Y D ++ + T+++TV +L + L+++ + + Sbjct: 480 QMLATPEVISRGF-VYVKDSEELMSQIHDTIMSTVNELTEIEMSQWGLIKQMLKDDVGRF 538 Query: 538 LKKVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 539 IYSQTKRRPMILPIIIEV 556 >gi|297559625|ref|YP_003678599.1| RNA-metabolising metallo-beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844073|gb|ADH66093.1| RNA-metabolising metallo-beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 561 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 296/555 (53%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG NM ++ YG + +++DCGV FP+++ PGVDL+ PD +I Sbjct: 19 LRIVPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGVDLILPDFDYIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH G + L +P+ S + L+ AK R+ + + Sbjct: 75 DDIEAVVLTHGHEDHIGGVPFLLRERADIPIVGSKLTLALITAKLGEHRIKPETVLVE-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ D G F +E VNHSIP+ +A+ IR+P G+++HTGD+K+D + G +TD Sbjct: 133 EGERHDFGPFDLEFFAVNHSIPDALAVGIRTPGGSVLHTGDFKMDQLPLDGRLTDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G+EG+ L+ DSTNA + G ++E+ + + I + + ++ ++V F+S V R++ +I Sbjct: 193 RFGDEGVDLLLSDSTNAEQPGFIVNERNLTEAIDKVFRQSQKRIVVACFASHVHRVQQVI 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRKI +G S+ R +++A D+G + + + ++++++ TGSQG Sbjct: 253 DAAVEHGRKIAFVGRSMVRNMNIARDLGYLSIPGDTVVDVKQLDHLRPDEVLLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ E DT++ +S IPGNE ++ + N L G +V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIEEGDTILLASSLIPGNENSVNRVINGLTRWGAKVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L + +RP+ + +HGE H+ AH +LA G+ + +G + Sbjct: 371 LVHVSGHAPAGELMYVLNMVRPRNFMPVHGEWRHMRAHADLARLTGVPSDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L + I+ V G DG +G D + RR L G +SV V +D+ I Sbjct: 431 VDLHKNRARIVGAVQAGYVYVDGSSVGDVTDAALKDRRVLGEEGFISVVVAVDSGSGKIL 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G PEI G G + ++ + + + D LR+ I + + + Sbjct: 491 GEPEIHTRGAGI----GADAYDDVIDRIQDALDKAARDGVNDPHQLRQLIRRSAGRWVNE 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMIIPVLVEV 561 >gi|227484978|ref|ZP_03915294.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus lactolyticus ATCC 51172] gi|227237133|gb|EEI87148.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus lactolyticus ATCC 51172] Length = 558 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 193/558 (34%), Positives = 300/558 (53%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L +P+GG+ E+G N AL YG IMIDCG++FP +++ GVD+V PD T++ Sbjct: 3 NEKKLRIIPIGGLHEVGKNCALVEYG----NDMIMIDCGLTFPNEEMLGVDIVIPDFTYV 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ L IF+TH HEDH GA+ + VY S GL+E K ++ + Sbjct: 59 EENKQKLKGIFVTHGHEDHVGAIPYFLKNVDTNVYCSKLTKGLIENKFKEHGLNPNKIKM 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V G+ S E +RV+HSIP++ A+ ++SPVG I+ TGD+K+D I D TD Sbjct: 119 V-NVNNTVKAGSLSAEFIRVSHSIPDSCAIAVKSPVGTIIFTGDFKMDFTPIDNDPTDIQ 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G +G+LAL DSTN REG +SEK + + +I AK ++V TF+S++ R++ Sbjct: 178 RLAELGKKGVLALFADSTNVEREGFSLSEKVVGETFVEIFGQAKSRIIVATFASNLHRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II AE+ RK+ L G S+ V +A ++G + K + ++ Y ++L++++TG Sbjct: 238 QIITAAEKYNRKVALSGRSMLNNVRIANELGYLNIKKNTLIDMKAIKKYADDELVILSTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP SAL +++ E R + L E D VI SS AIPGNE+AI N L + G ++I Sbjct: 298 TQGEPLSALTRMANKEHRQITLNETDMVILSSSAIPGNEMAINTTINNLTKIGCKIIYSS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VH SGH ++K MYQ I+P+ L+ HGE L H E+A G + N Sbjct: 358 L-AKVHASGHACQEEIKLMYQLIKPKYLIPAHGEIRQLQKHSEIAQDMGQPKENIFICEN 416 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ I +V G L DG IG ++ + R+ LS G L V++ D H Sbjct: 417 GDVIEFTKKSAGIKGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSITFDRHTQ 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PEIV G Y + I + V+ ++ + K L ++ I L+S Sbjct: 477 ELLAGPEIVSRGF-VYVKENQDIIENAKDVVLRSINKCKKQDIKALSQIKYQIREDLKSY 535 Query: 538 LKKVWGKKPLVTVFINKI 555 + G+ P++ I++I Sbjct: 536 IYNELGRDPMILPVISEI 553 >gi|148655032|ref|YP_001275237.1| beta-lactamase domain-containing protein [Roseiflexus sp. RS-1] gi|148567142|gb|ABQ89287.1| beta-lactamase domain protein [Roseiflexus sp. RS-1] Length = 561 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 289/566 (51%), Gaps = 16/566 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGG GE+G NM + + + +++DCGV FP+ D+ GVDLV PDIT+ Sbjct: 1 MAKNRLRAIPLGGAGEVGRNMWVLE----QNDEILVLDCGVMFPEADMLGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ + AI +TH HEDH GA+ L L P +Y +P +G+L K R+ + Sbjct: 57 LRDQKDKIKAIVLTHGHEDHIGAVPYLVPELDFPPIYGTPLTLGMLAGKLKEHRLLDRAR 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + QAG+ VG+F+IE V HSIP+T+ L I +PVG ++ DWK D + G TD Sbjct: 117 LVKMQAGESFTVGSFTIEPFSVAHSIPDTVGLAIDTPVGLAIYLTDWKFDHTPVDGRPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G L L+ D +G SE+ + + I A G ++V TF+S+VSR Sbjct: 177 LVKLSELGRRSPLLLITDCVRVESKGYTPSEQVVGEAFDSIFATAPGRIIVATFASNVSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +ID AE GRK+V+ G S++ +A+++G ++ + + + +Q+ VI Sbjct: 237 VQQVIDSAEAYGRKVVVAGRSMENTTRIALELGYLRAQQGTLIRPQEAAGLADDQVAVIC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ + +VK+ E DTV+ S+ IPGNEV++ + N L G VI Sbjct: 297 TGSQGEPMSALARMANRDYPHVKIKEGDTVVVSATPIPGNEVSVNRVINNLFRLGAEVIY 356 Query: 359 EDAECPV--HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE----GIAC 412 + + HVSGH +LK +RP+ +V HG+ H++ +++LAL + Sbjct: 357 GGSPSSLAVHVSGHAAQEELKMALAILRPEFVVPFHGDYRHMMLYRKLALGMGGLFSESN 416 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 V NG ++ + +++ +V G DG +G + + R+ L+ G L V V Sbjct: 417 VIIPENGAVMEFSRNYVKVTGKVPVGYVYVDGTTVGDVGQVVVRDRQLLARDGILMVVVS 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL--LRES 529 +D + P++V G Y + + V + + ++ + Sbjct: 477 IDRTTGELVAGPDVVSRGF-VYMRQSDDLIESTKNIVRDALSKRNGSGKMEIDSAFVNRK 535 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKI 555 I + L ++P+V + ++ Sbjct: 536 IKDVVSDYLYGQTRRRPMVLPVVMEV 561 >gi|212696189|ref|ZP_03304317.1| hypothetical protein ANHYDRO_00725 [Anaerococcus hydrogenalis DSM 7454] gi|212676818|gb|EEB36425.1| hypothetical protein ANHYDRO_00725 [Anaerococcus hydrogenalis DSM 7454] Length = 558 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 190/560 (33%), Positives = 301/560 (53%), Gaps = 11/560 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+GEIG N + Y + IMIDCG++FP +D+ GVD+V PD T+I Sbjct: 4 QNKLKVIPLGGLGEIGKNCTVVEY----KNEMIMIDCGLTFPDEDMLGVDIVIPDFTYIE 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + L IFITH HEDH GA+ L + VY S GLLE K ++ + Sbjct: 60 ENKDKLKGIFITHGHEDHIGAIAYLLKLIDTNVYCSKLTKGLLENKFKEHGLNPNRLKMV 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + V VG S E +RV+HSIP++ A+ ++SP+G I+ TGD+K+D I G+ TD Sbjct: 120 -NVNNTVKVGDLSAEFIRVSHSIPDSCAIAVKSPIGTILFTGDFKMDFTPIDGEPTDIQK 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+G +G+L L DSTN EG+ +SEK + + ++ A G ++V TF+S++ R++ Sbjct: 179 LAALGKKGLLCLFSDSTNVEIEGSSMSEKKVGETFINLFGQAPGRIVVATFASNLHRVQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +I AE+ +K+ L G S+ V +A +G IK + + ++ Y +Q+++++TG+ Sbjct: 239 VIYAAEKYNKKVALSGRSMLNNVKIASSLGYIKIRSNTIIDIKNLKDYSDDQIVILSTGT 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V L DTVI SS AIPGNE++I + N L + G +I Sbjct: 299 QGEPLSALTRMANNEHKQVHLNSSDTVILSSSAIPGNEMSINNTINNLTKIGCNIIYNSL 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VH SGH ++K M+Q P+ + HGEP L HKE+A+ G+ V +NG Sbjct: 359 -AKVHASGHACQEEIKLMHQLTTPKYFIPAHGEPRQLKKHKEIAIDMGMNEDNVLVGQNG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 + I +V G L DG IG ++ + R+ LS G L V++ ++ H Sbjct: 418 DIFEFTKRGARINGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSLTIEKHTQK 477 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + PEIV G Y + + + VI T+ + + ++ I +L+S + Sbjct: 478 VLSNPEIVSRGF-IYVKENQDLIENSKDIVIRTMKKCQKKDIHAISQIKYQIRESLKSYI 536 Query: 539 KKVWGKKPLVTVFINKISRQ 558 G+ P++ + ++ Sbjct: 537 YNQTGRDPMILPVLTEVENN 556 >gi|256396958|ref|YP_003118522.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256363184|gb|ACU76681.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 561 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 282/555 (50%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG K +++DCGV FP++ PGVDL+ PD + I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GKLLIVDCGVLFPEEAQPGVDLILPDFSAIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++ + +THAHEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDVVGVVLTHAHEDHIGGVPYLLKEAPDIPLIGSKLTLALVEAKLTEHRIRPYSLQVV-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD +G F V VNHSIP+ MA+ I++P G + HTGD+K+D + +TD ++ Sbjct: 133 EGDVEQIGPFECRFVAVNHSIPDAMAVAIKTPAGTVFHTGDFKMDQLPLDDRLTDLATIA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G GI L+ DSTNA G SE+ I + + AKG ++V +F+S V R++ + Sbjct: 193 ELGKAGIDLLLADSTNAEVPGFVTSEREITPVLDRVFGRAKGRIIVASFASHVHRVQQVC 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A GRK+ L+G S+ R ++VA D+G +K L + + P ++++++ TGSQG Sbjct: 253 DVAALHGRKVALVGRSMVRNMAVARDLGYLKVPADLIIDLKEIDDLPDDKVVLMCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + V++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QVRITGDDTVILASSLIPGNENAVNRVINGLTRWGATVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L + +P+ + +HGE HL A +LA++ G+ V +G Sbjct: 371 MVHVSGHAAAGELLYFFNLAKPRNFMPVHGEWRHLRAAADLAMKTGVPEDRVVIAEDGVT 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + RR L G +SV V + I Sbjct: 431 VDLVDGVARITGKVDAGYVYVDGSSVGSVTEASLKDRRILGDEGFVSVFVAVSADTGTIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G D + ++ + D D L++ + ++ + Sbjct: 491 TGPVITARGFGLDDQ----TLEQAKPLIVQALADAAAEGIGDTHQLQQLVRRSVGRWVSN 546 Query: 541 VWGKKPLVTVFINKI 555 ++P++ + ++ Sbjct: 547 TTRRRPMILPVVVEV 561 >gi|325846725|ref|ZP_08169640.1| hypothetical protein HMPREF9246_0645 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481483|gb|EGC84524.1| hypothetical protein HMPREF9246_0645 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 558 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 190/560 (33%), Positives = 301/560 (53%), Gaps = 11/560 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+GEIG N + Y + IMIDCG++FP +D+ GVD+V PD T+I Sbjct: 4 QNKLKVIPLGGLGEIGKNCTVVEY----KNEMIMIDCGLTFPDEDMLGVDIVIPDFTYIE 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + L IFITH HEDH GA+ L + VY S GLLE K ++ + Sbjct: 60 ENKDKLKGIFITHGHEDHIGAIAYLLKLIDTNVYCSKLTKGLLENKFKEHGLNPNRLKMV 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + V VG S E +RV+HSIP++ A+ ++SP+G I+ TGD+K+D I G+ TD Sbjct: 120 -NVNNTVKVGDLSAEFIRVSHSIPDSCAIAVKSPIGTILFTGDFKMDFTPIDGEPTDIQK 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+G +G+L L DSTN EG+ +SEK + + ++ A G ++V TF+S++ R++ Sbjct: 179 LAALGKKGLLCLFSDSTNVEIEGSSMSEKKVGETFINLFGQAPGRIVVATFASNLHRVQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +I AE+ +K+ L G S+ V +A +G IK + + ++ Y +Q+++++TG+ Sbjct: 239 VIYAAEKYNKKVALSGRSMLNNVKIASSLGYIKIRSNTIIDIKNLKDYSDDQIVILSTGT 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V L DTVI SS AIPGNE++I + N L + G +I Sbjct: 299 QGEPLSALTRMANNEHKQVHLNSSDTVILSSSAIPGNEMSINNTINNLTKIGCNIIYNSL 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VH SGH ++K M+Q P+ + HGEP L HKE+A+ G+ V +NG Sbjct: 359 -AKVHASGHACQEEIKLMHQLTTPKYFIPAHGEPRQLKKHKEIAMDMGMNEDNVLVGQNG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 + I +V G L DG IG ++ + R+ LS G L V++ ++ H Sbjct: 418 DIFEFTKRGARINGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSLTIEKHTQK 477 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + PEIV G Y + + + VI T+ + + ++ I +L+S + Sbjct: 478 VLSNPEIVSRGF-IYVKENQDLIENSKDIVIRTMKKCQKKDIHAISQIKYQIRESLKSYI 536 Query: 539 KKVWGKKPLVTVFINKISRQ 558 G+ P++ + ++ Sbjct: 537 YNQTGRDPMILPVLTEVENN 556 >gi|302542105|ref|ZP_07294447.1| metallo-beta-lactamase [Streptomyces hygroscopicus ATCC 53653] gi|302459723|gb|EFL22816.1| metallo-beta-lactamase [Streptomyces himastatinicus ATCC 53653] Length = 561 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PGVDL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGVDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIDGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVE-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ +G F E V VNHSIP+ +A+ IR+P G VHTGD+K+D + G +TD + Sbjct: 133 EGNLERIGPFECEFVAVNHSIPDALAVAIRTPAGLAVHTGDFKMDQLPLDGRLTDLPAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + +A+ ++V +F+S V RI+ I+ Sbjct: 193 KLGEEGIDLLLSDSTNAEVPGFVPPERDISNVLGQVFASAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G ++ L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDDEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKNRCVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L +I +V G DG +G + + RR L G +SV V++D+ I Sbjct: 431 VDLVGGIAKITGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVFVVVDSTTGKIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G G +L + ++ D +++ + A+ + Sbjct: 491 GGPHIQARG----SGIEDGAFAAVLPKIEDSLAKAASDGVADSHQIQQLVRRAVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 SYRRRPMILPVVVEV 561 >gi|294815465|ref|ZP_06774108.1| metallo-beta-lactamase family hydrolase [Streptomyces clavuligerus ATCC 27064] gi|294328064|gb|EFG09707.1| metallo-beta-lactamase family hydrolase [Streptomyces clavuligerus ATCC 27064] Length = 580 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 287/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L PLGG+GEIG NM ++ Y + +++DCGV FP+D+ PG+DL+ PD T Sbjct: 33 LRKGGLRVTPLGGLGEIGRNMTVFEY----DGRLLIVDCGVLFPEDEQPGIDLILPDFTT 88 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 89 IRDRLDDVEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 148 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G++ +G F E + VNHSIP+ +A+ IR+P G VHTGD+K+D + G +TD Sbjct: 149 EV--AEGNRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPLDGRLTD 206 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V R Sbjct: 207 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFANAQKRIIVASFASHVHR 266 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G ++ L + ++ P +++++ Sbjct: 267 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDHEVVLVC 326 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 327 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 385 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + Sbjct: 386 KG-NAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIA 444 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L I+ +V G DG +G + + RR L G +S+ V++D+ Sbjct: 445 EDGVVVDLVDGRARIVGKVQAGYVYVDGLSVGDVTEASLKDRRILGDEGIISIFVVVDST 504 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P + G D + G + V + + L++ I + Sbjct: 505 TGKIVGGPHLQARGSGIDDSNFGGVLPK----VEEALAKSAADGVAEPHQLQQLIRRTVG 560 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 561 KWVSDTYRRRPMILPVVVEV 580 >gi|153009736|ref|YP_001370951.1| beta-lactamase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561624|gb|ABS15122.1| beta-lactamase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 558 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 282/554 (50%), Positives = 400/554 (72%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ELVFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTELVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEHGAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+K +VG F +E+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGEKFEVGPFKVEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG+ G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGDAGVLALICDSTNALREGESPSERQVGESLRELIENARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE +I IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKSILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI V VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQVAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + I Sbjct: 424 LRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKIID 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P + G + +LL I + +P+ RRKD++L+RES+ A+R+ + Sbjct: 484 EPDLVTFGVPEENAQGDLLEDILLDAAIEAIDSIPRVRRKDIELVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|239831701|ref|ZP_04680030.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239823968|gb|EEQ95536.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 585 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 283/554 (51%), Positives = 399/554 (72%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ELVFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 32 NTTELVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 91 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + IP Sbjct: 92 EAEKHNLRGIVITHAHEDHFGALLDLWPHLKVPVYATPFTAGLLEAKRQSEDGAPDIPIT 151 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+K +VG F IE+V V HSIPE ++L + +P+G +VHTGDWK+D + LG V D+ Sbjct: 152 IYKAGEKFEVGPFKIEAVAVTHSIPEPVSLALTTPLGTVVHTGDWKMDPEPSLGPVIDEA 211 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG+ G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 212 RFRAIGDAGVLALICDSTNALREGESPSERQVGESLRELIENARGRVAITTFSSNVGRIR 271 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 272 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 331 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 332 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 390 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI V VR+G M Sbjct: 391 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQVAQVRDGDM 450 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + I Sbjct: 451 LRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKIID 510 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P + G + +LL I + +P+ RRKD++L+RES+ A+R+ + Sbjct: 511 EPDLVTFGVPEENAQGDLLEDILLDAAIEAIDSIPRVRRKDIELVRESVRRAVRAAANEA 570 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 571 WGKKPVVTVFVNRI 584 >gi|260888211|ref|ZP_05899474.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|260862045|gb|EEX76545.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] Length = 542 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 182/547 (33%), Positives = 300/547 (54%), Gaps = 11/547 (2%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG+GEIG NM + +G ++ID G+ FP +D+ G+DLV PDIT++++ R + I Sbjct: 2 GGLGEIGKNMTVLRFG----NDILVIDAGLMFPTEDMLGIDLVIPDITYLLENRDCIKGI 57 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 +TH HEDH GAL + + + VPVY +P +G+L+ + VS + AGD++ + Sbjct: 58 VLTHGHEDHIGALPYVLTQIDVPVYGTPLTLGILKGRLEERGVSTQNL-HPIMAGDQLRL 116 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G F+I+ VRVNHSIP+ +AL IR+P+G I HTGD+K+D + G +TD +L IGN+ + Sbjct: 117 GCFAIKFVRVNHSIPDAVALAIRTPLGTIFHTGDFKMDYTPVDGKLTDFKTLSEIGNKSV 176 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 L ++ DSTNA R SE + + + A+G ++V TFSS+VSRI+ IID A + Sbjct: 177 LLMLADSTNAERTEPVPSEATVGVAFDRVFRRARGRIIVATFSSNVSRIQQIIDSAVRYR 236 Query: 252 RKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 RK+ +LG S+ V ++A+++G + + + + G Y Q+++ TGSQGEP SAL Sbjct: 237 RKVAILGRSMVNVTNIAMELGYLTAPEGTIVDIDEIGRYNDNQIVIATTGSQGEPMSALT 296 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 +++ R V + DT+I S+ IPGNE +G + L++ G V+ +E +HVSGH Sbjct: 297 RMAMSSHRKVNITPMDTIIISATPIPGNERYVGKTIDLLLKLGADVVYGRSEG-IHVSGH 355 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDP 428 + LK M+ IRP+ + +HGE LV H +LA + NG +L + Sbjct: 356 AGQDALKLMHNLIRPRYFMPVHGEYRMLVRHAKLAQSLGMPEENIFLNENGGILEFTRNT 415 Query: 429 IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVD 487 ++ +V G+ L DG +G ++ + R+QLS G + V V ++ + P+ V Sbjct: 416 AKLNGKVQSGIVLIDGLGVGDVGNIVLRDRQQLSREGVIIVVVTINRSSGRMVSGPDFVS 475 Query: 488 IGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPL 547 G Y + ++ + V + + + ++ +I L + ++P+ Sbjct: 476 RGF-VYVRESEELMDTARRRVFSALKKCEDEHITEWSSIKTTIRDVLGRFIFDATRRRPM 534 Query: 548 VTVFINK 554 + I + Sbjct: 535 ILPIIME 541 >gi|163759525|ref|ZP_02166610.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] gi|162283122|gb|EDQ33408.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] Length = 555 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 289/554 (52%), Positives = 399/554 (72%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ +LVF+PLGGVGEIGMN+ALYGYG+P R WIM+DCGV+FP +LPGVDLV PDI F+ Sbjct: 3 KDNDLVFIPLGGVGEIGMNLALYGYGTPKDRDWIMVDCGVTFPGPELPGVDLVLPDIDFV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K L AI ITHAHEDHYG L +W L VPVYAS F G+LEAKR YER ++P Sbjct: 63 KKLGGRLKAIIITHAHEDHYGGLAQIWPQLKVPVYASAFTAGMLEAKRAYERTRAEVPVT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AG++ VG F IE V VNHSIPE +L I +P+G ++HTGDWK+D LG +TD++ Sbjct: 123 LFKAGERFTVGPFEIEPVAVNHSIPEPFSLAIGTPLGKLIHTGDWKIDTTPSLGPLTDEN 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G EGILA+MCDSTNAMR+G SE + + D+++ A+G V +TTFSS+V RIR Sbjct: 183 RFRQLGEEGILAMMCDSTNAMRDGISPSEHEVSAGLRDVIEQAEGRVAITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++L+GSS+KRVV+VA ++G+++ FL ++ +G PR +++VI TGS Sbjct: 243 SIAEAARDAGREVLLMGSSIKRVVNVATELGMMEGLPGFLEEDEYGFIPRNKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EMR+V LA DTV+FSSR IPGNE I IKN L+++G++++++ Sbjct: 303 QGEPRAALAKLSRDEMRHVALASGDTVVFSSRTIPGNEKGILEIKNALIDRGLKIVSD-T 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP N+L +MY+W++PQ+LV +HGE HL A ELA GIA P VRNG + Sbjct: 362 DALVHVSGHPRRNELVQMYEWVKPQILVPVHGEAAHLTAQAELAQASGIAITPRVRNGSI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P ++I E HG KDG LIG + ++GI++RR+LSF GH++VNV+LD + Sbjct: 422 LRLAPGVPDVIGEAPHGRVYKDGHLIGDYDEMGISERRKLSFAGHVAVNVVLDQRFEFQR 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + +G+PA+D +G + +L +V+ V +P+ RRKD+ +RE+I ++R+ +V Sbjct: 482 DPVVSAMGLPAFDVEGDDMEDILYDSVLGAVESIPRGRRKDIDNVREAIRRSVRAAANEV 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ ++ Sbjct: 542 WGKKPVVTVFVTRV 555 >gi|227821634|ref|YP_002825604.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] gi|227340633|gb|ACP24851.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] Length = 555 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 312/554 (56%), Positives = 430/554 (77%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + EELVFLPLGGVGEIGMN+ LYGYGSP SR+WIM+DCGV+FP +LPGV+LV PDI+F+ Sbjct: 3 QEEELVFLPLGGVGEIGMNLGLYGYGSPGSRQWIMVDCGVTFPGPELPGVELVLPDISFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +ER+NL AI ITHAHEDHYGAL+DLW L+VPVYASPF G+LEAKR +E+ +IP Sbjct: 63 AEERRNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRDFEKSRGEIPIT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AGD+++VG FSIE+V VNHSIPE M+LVIR+P+G +VHTGDWK+D + LG +T++ Sbjct: 123 IFKAGDRINVGPFSIEAVGVNHSIPEPMSLVIRTPLGTVVHTGDWKIDLEPSLGPITNEA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G EG+LAL+CDSTNA+R+G SE+ + +++ I+ +A+G V +TTFSS+V RIR Sbjct: 183 RFRQVGEEGVLALVCDSTNALRDGVSPSEREVSESLAKIIADAEGRVGITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+ + AE GR+++LLGSS+KRVV+VA D+GI++ + FL+++ FG PR++++VI TGS Sbjct: 243 SVAEAAEAAGREVLLLGSSMKRVVAVARDLGIMEGLKPFLAEDEFGYIPRDKVVVILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+++R EMRNV + DT++FSSR IPGNE AI IKN L+EQG+ +I + + Sbjct: 303 QGEPRAALAKIARDEMRNVAFSAGDTIVFSSRTIPGNEKAINDIKNGLIEQGIHIITD-S 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP N+L++MYQW++P+++V +HGE HL AH ELAL GIA VP +RNG++ Sbjct: 362 EALVHVSGHPRRNELQQMYQWLKPEIVVPVHGEAAHLTAHAELALHSGIASVPRLRNGEI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P ++DE HG KDG LIG F ++GI +RR+LSF GH+SVNV+LD+ Y+ G Sbjct: 422 LRLAPGPAGVVDEARHGRIYKDGTLIGDFDEMGIGERRKLSFAGHVSVNVVLDSRYDFLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+P +D +G + +L V+ V +P+ +RKDL +L+E++ A+RS + Sbjct: 482 DPDVVPIGLPQFDDEGDDMDDVLYDAVLGAVESIPRAKRKDLSMLQEAVRRAVRSTANQT 541 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+ K+ Sbjct: 542 WGKKPIVTVFVTKV 555 >gi|163816754|ref|ZP_02208117.1| hypothetical protein COPEUT_02944 [Coprococcus eutactus ATCC 27759] gi|158448011|gb|EDP25006.1| hypothetical protein COPEUT_02944 [Coprococcus eutactus ATCC 27759] Length = 554 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 176/559 (31%), Positives = 293/559 (52%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E + +PLGG+ +IGMN+ Y I+IDCG++FP+DD+ G+DLV PD+T++ Sbjct: 5 NKETVKIIPLGGLEQIGMNITAIEY----EDSIIVIDCGLAFPEDDMLGIDLVIPDVTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + +TH HEDH GA+ + L++P+YA+ +GL+E K + Sbjct: 61 KENADKVRGLVVTHGHEDHIGAIPYIEKELNMPIYATKLTMGLIENKLKEHNLMNNTRRK 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++GAF +E +R NHSI ++ AL I +P G +VHTGD+K+D + G D Sbjct: 121 VVKYGQNINLGAFRVEFIRTNHSIADSAALAIYTPAGLLVHTGDFKIDYTPVFGGTIDLQ 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRI 240 +G +G+LALM DSTNA +EG SEK + + ++ + K +++ TF+S+V R+ Sbjct: 181 RFAELGKKGVLALMADSTNAEKEGFTQSEKTVGRTFDNLFNDNKDHRIIIATFASNVDRV 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A + RK+++ G S+ +++ A ++G I D + YP E++++I T Sbjct: 241 QQIINSAYKYDRKVIIEGRSMVNIITTASELGYINIPDNTLIDISQMKNYPDEKVVLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ V + D VIFSS IPGNE A+ + N L +G VI E Sbjct: 301 GSQGENMAALSRIAASIHNKVAIKPGDVVIFSSHPIPGNEKAVFKVINELEAKGAHVIFE 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH +LK +Y +P+ + +HGE HL H ELA + GI + + Sbjct: 361 ----DTHVSGHACREELKLIYALTKPKYAIPVHGEYRHLKRHAELAREMGIPKENIKIMT 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 G +L + D +++ +V DG +G ++ + R+ LS G + + V LD Sbjct: 417 TGDVLEIGEDKFDVVGKVPAQGVFVDGLGVGDVGNIVLRDRQLLSQNGLIIIVVTLDRYS 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + + + T + D ++ I + Sbjct: 477 NQLVAGPDIVSRGF-VYVRESETLMEDCRITCQEALDRCLSRGVTDWGKIKSVIKDDMGE 535 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 536 FLWKRTKRSPMILPIITEV 554 >gi|323340638|ref|ZP_08080890.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] gi|323091761|gb|EFZ34381.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] Length = 558 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 167/558 (29%), Positives = 277/558 (49%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E LGG+GEIG N YG + I++D G+ FP+DDL G+D V P+ ++ Sbjct: 7 KNNETAVFALGGLGEIGKNT----YGIQFQDEIIVVDAGIKFPEDDLLGIDYVIPNYQYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VP+YA P A+ L+++K + K Sbjct: 63 VANQQKIKALVITHGHEDHIGGIPYLLQQVNVPIYAGPLALALIKSKLEEHGLLKTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + S+ R HSIP+T+ I++P G IV TGD+K D I + Sbjct: 123 EINEDTVLRFRKTSVSFFRTTHSIPDTLGAAIKTPSGTIVCTGDYKFDLTPITNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+L L+ DSTNA SE+ + K+I I + +G ++ TF+S++SRI+ Sbjct: 183 KMAKLGEEGVLCLLSDSTNAEIPNFTKSERWVGKSIKRIFEKVEGRIIFATFASNISRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 D A GRKI + G S++ + ++G + + + P +++++ TG Sbjct: 243 QAADAAVNKGRKIAVFGRSMEAAIVNGRELGYLNIPEDAIVDAREINSLPANKVMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V + DTV+FSS IPGN +++ + N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQVSIQPGDTVVFSSSPIPGNTLSVNKVINELEEAGATVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE L H LA + + N Sbjct: 363 VN-NIHASGHGGQEEQKLMLRLMKPKFFMPVHGEYRMLKIHTRLAQNCDVPKENCYILEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D I DG IG ++ + RR LS G + V +D + Sbjct: 422 GDVLALTHDSARIAGHFNADDVYIDGSGIGDIGNVVLRDRRILSEEGLVVVVATIDMKNR 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + G++ K V ++ + + +L+++I S L+S Sbjct: 482 EVLSGPDLLSRGF-IYMRESGELINKGRKQVFRSIKRTLKNEKISETMLKDAIVSDLQSF 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + PL+ + + Sbjct: 541 LFEQTERHPLIIPMLVTV 558 >gi|283458485|ref|YP_003363112.1| putative hydrolase [Rothia mucilaginosa DY-18] gi|283134527|dbj|BAI65292.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Rothia mucilaginosa DY-18] Length = 616 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 305/559 (54%), Gaps = 14/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + L +PLGG+GE+G NM +Y + K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 59 LKKDTLRVVPLGGLGEVGRNMTVYEI----NGKLLIVDCGVLFPEESQPGVDLILPDFSY 114 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I+ +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 115 IVDRLDDVVAMVLTHGHEDHIGAVPYLLRRRPDIPLVGSELTLALVEAKLAEHRIKPYTL 174 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G F E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 175 AV--KEHQVERFGPFECEFVAVNHSIPDALAVYIRTKAGKVLHTGDFKMDQLPLDGRLTD 232 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G +EK I + ++ ++A+G ++V +FSS V R Sbjct: 233 LRHFARLGEEGVDLFLPDSTNAEVPGFTPTEKHIGPVLSNVFRDARGRIIVASFSSHVHR 292 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+VL+G S+ R +++A +G +K + + + Y +Q++++ Sbjct: 293 VQQVLDAAAERGRKVVLVGRSMVRNMTIAEKLGYLKVPANVLVDLKKVDDYRPDQIVMMC 352 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ + +++ DTV+ +S IPGNE ++ I N L++ G V+ Sbjct: 353 TGSQGEPMAALSRMANGDHK-IQIEPGDTVVLASSLIPGNETSVFRIINALMKLGANVVH 411 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HL+A +LA++ G+ V Sbjct: 412 KG-NAKVHVSGHAAAGELLYCYNILKPKNVMPVHGEVRHLIASGDLAMETGVPKKNVLLC 470 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L ++ EV DG +G+ + + RR L G +S+ ++D Sbjct: 471 ESGTVVDLRDGVASVVGEVPCEYLYVDGRSVGEVTESDLKDRRILGEEGFVSIVTVVDRA 530 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+I GI D +I + + + P + ++ L++ + + Sbjct: 531 TKRVVTGPDIHARGIAEDDSVFDEIVPKITAALEDALHRAP-EKVHTVQQLQQIVRRTIG 589 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + +KP++ + + Sbjct: 590 AWISRRLRRKPMIVPVVVE 608 >gi|116251482|ref|YP_767320.1| beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256130|emb|CAK07211.1| putative beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 556 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 323/555 (58%), Positives = 421/555 (75%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P Sbjct: 63 ASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKAKIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGD ++VG FSIE V VNHSIPE M+L+IR+PVGN++HTGDWK+D + LG +TD+ Sbjct: 123 TPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPVGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I++NA+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIENAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV VA DVG+++ + F+S+E +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVDVAQDVGLMEGVKPFISEEEYGYIPRDKVVVILTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+LSR EMRNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 303 SQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD- 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP N+L+RMY+W RP+++V +HGE HL AHKELA Q GIA VP VRNG Sbjct: 362 TEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGIALVPRVRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +LRL P P+E+I E HG KDG LIG F ++GI +R++LS+VGH++VNV+LD Y+I Sbjct: 422 ILRLAPGPVEVIGEAPHGRIYKDGTLIGDFDEMGIGERKKLSYVGHVAVNVVLDTRYDIV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P+++ IG+P YD +G + L ++ + +P+ RRKD+ +L+E++ A+RS Sbjct: 482 GEPDLISIGLPTYDDEGEDMEDTLFDAAVSAIESIPRARRKDIDMLQEAVRRAIRSAANN 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPLVT F+ K+ Sbjct: 542 TWGKKPLVTAFVTKV 556 >gi|156743999|ref|YP_001434128.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235327|gb|ABU60110.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 561 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 172/566 (30%), Positives = 288/566 (50%), Gaps = 16/566 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGG GE+G NM + + + +++DCGV FP+ D+ GVDLV PDIT+ Sbjct: 1 MAKNRLRAIPLGGAGEVGRNMWVLE----QNDEILVLDCGVMFPEADMLGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + ++ + AI +TH HEDH GA+ L L P +Y + +G+L K R+ ++ Sbjct: 57 LRDQKDKIKAIVLTHGHEDHIGAIPYLVPELDFPPIYGTTLTLGMLTGKLKEHRLLDRVR 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + QAG+ +G+F+IE V HSIP+T+ L I +PVG +++ DWK D + G TD Sbjct: 117 LMKMQAGEPFTIGSFTIEPFSVAHSIPDTVGLAIDTPVGLVIYLTDWKFDHTPVDGRPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G L L+ D +G SE+ + + I A G ++V TF+S+VSR Sbjct: 177 LVKLSELGRRSPLLLITDCVRVESKGYTPSEQVVGEAFDSIFATAPGRIIVATFASNVSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +ID AE GRK+++ G S++ +A+++G ++ + + + +Q+ VI Sbjct: 237 VQQVIDSAEAYGRKVIVAGRSMENTTRIALELGYLRAQQGTLIRPQEAAGLTDDQVAVIC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ + +VK+ E DTV+ S+ IPGNEV++ + N L G VI Sbjct: 297 TGSQGEPMSALARMANRDYPHVKIKEGDTVVVSATPIPGNEVSVNRVINNLFRLGAEVIY 356 Query: 359 EDAECPV--HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE----GIAC 412 D + HVSGH +LK + +RP+ +V HG+ H++ +++LAL + Sbjct: 357 SDNPSGLAVHVSGHAAQEELKMVLAILRPEFVVPFHGDYRHMMLYRKLALGMGGLFSNSN 416 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 V NG ++ + +V G DG +G + + R+ L+ G L V V Sbjct: 417 VIIPENGVVMEFSRNYARTTGKVPVGYVYVDGTTVGDVGQVVVRDRQLLARDGILMVVVS 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL--LRES 529 +D + P++V G Y + + V + + ++ + Sbjct: 477 IDRTTGELVAGPDVVSRGF-VYMRQSDDLIESTKNIVRDALSRRNGGGKTEIDSAFVNRK 535 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKI 555 I + L ++P+V + ++ Sbjct: 536 IKDVVSDYLYGQTRRRPMVLPVVMEV 561 >gi|111225096|ref|YP_715890.1| metallo-beta-lactamase family hydrolase [Frankia alni ACN14a] gi|111152628|emb|CAJ64369.1| putative hydrolase of the metallo-beta-lactamase superfamily [Frankia alni ACN14a] Length = 561 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 166/560 (29%), Positives = 285/560 (50%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGGVGEIG NM ++ + S + +++DCGV FP+D PG+DL+ PD T Sbjct: 14 LRADGLRIIPLGGVGEIGRNMTVFEH----SGRLLIVDCGVLFPEDFQPGIDLILPDFTA 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ A+ +THAHEDH GA+ L +P+ + + LL AK R+ K Sbjct: 70 IRDRLADIDALILTHAHEDHIGAVPYLLRERRDIPIVGTRLTLALLNAKLAEHRI--KAV 127 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++ G F E VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 128 TQEIREEERHTYGPFECEFFAVNHSIPDAVAVAIRTEAGLVLHTGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ L+ DSTNA G SE+ I + + ++A +++ F+S V R Sbjct: 188 LGGFARLGREGVDLLLSDSTNAEVPGFVASEREIAPVLDGVFRDATRRIIIACFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D AE GR + +G S+ R + VA D+G+++ L + P + +I+ Sbjct: 248 VQQVLDAAEAHGRSVCFVGRSMVRNMGVARDLGLLRVPPGLIVDARDVDSLPDRNICLIS 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ + +++ DTV+ +S IPGNE A+ + N L G +V+ Sbjct: 308 TGSQGEPLSALSRMANRDH-QIRIQAGDTVVLASSLIPGNENAVFRVINGLTRYGAKVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VH SGH +L + RP ++ +HGE HL AH +LA G+ V Sbjct: 367 KGV-AKVHTSGHAPAGELLYVLNATRPSNVMPVHGEWRHLRAHAKLAEATGVPADHVVLA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L I V G DG +G + + RR L G +++ V++D Sbjct: 426 EDGMVIDLIDGRARITGAVPCGYVYVDGAAVGDVGEPSLKDRRILGEEGFITITVVVDAA 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P++ G D + + V + D + D L++ + + Sbjct: 486 AGKVVVGPDLSARGF----TDSPATFDSVARLVSDGLADAMRGGMNDTSALQQLVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + + ++P++ + ++ Sbjct: 542 RWVNEHYRRRPMIVPVVLEV 561 >gi|83311870|ref|YP_422134.1| metallo-beta-lactamase superfamily hydrolase [Magnetospirillum magneticum AMB-1] gi|82946711|dbj|BAE51575.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Magnetospirillum magneticum AMB-1] Length = 549 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 224/555 (40%), Positives = 329/555 (59%), Gaps = 6/555 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M EL+FLPLGGVGEIGMN+ALYGY KW+M+DCGVSF + +P VD+V D + Sbjct: 1 MSQGELLFLPLGGVGEIGMNLALYGY----DGKWLMVDCGVSFGDETMPMVDVVMADPAW 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + R L I ITH HEDH GA+ LW L PV+A+PF+ +L+ K + ++P Sbjct: 57 IEERRDKLAGIVITHGHEDHLGAVQYLWDRLRCPVWATPFSASILKNKLHETGLQAQVPL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G + VG F IE + + HSIPE L IR+P+G +VHTGDWK D D +LG TD Sbjct: 117 NVVELGSRFKVGPFEIEMISITHSIPEPNLLAIRTPLGTVVHTGDWKFDPDPLLGLPTDT 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++L +G EG+LAL+ DSTN +G SE ++ ++ +++ G + V+ F+++V+R+ Sbjct: 177 EALRRVGKEGVLALIGDSTNVFTKGHSGSESEVRGSLIELLGRFDGRIAVSCFATNVARL 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 SI A R + L+G SL R+ A + G + FL++ G P+++++ I TG Sbjct: 237 ESITVAAMANDRSVALVGRSLWRIDKAARENGYLADLPPFLTEHDAGYLPKDKVVYICTG 296 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++ G+ +V L + D IFSSR IPGNE I ++N LV QGV V+ E Sbjct: 297 SQGEPRAALARIASGDHPHVHLGKGDVCIFSSRIIPGNEKDIFKLQNDLVRQGVEVVTEK 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP +++ MY+ +RP+V V +HGE HL H LA G+ NG Sbjct: 357 DEF-VHVSGHPARQEMEEMYRLLRPRVAVPVHGEARHLQEHARLARACGVEEAIETSNGA 415 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 MLRL P P+E+ID V G DG I + + RR++ F G V V+LD + Sbjct: 416 MLRLAPGPVEVIDHVPTGKLCVDGPRIVRLDSEILRNRRRMVFNGSAVVTVVLDKVGKLL 475 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P++ +G+ + + H +++ V + +LPQ R+D ++RE+ A+R L+ Sbjct: 476 GDPQLTALGLLDAGHEAEE-HDAVVEAVRDAIEELPQKVRRDDAVVREAARLAVRRSLRD 534 Query: 541 VWGKKPLVTVFINKI 555 GKKP+ V + ++ Sbjct: 535 THGKKPITEVHLVRV 549 >gi|65318978|ref|ZP_00391937.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacillus anthracis str. A2012] Length = 542 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 173/545 (31%), Positives = 281/545 (51%), Gaps = 10/545 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ + + Sbjct: 1 MSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + + +TH HEDH G + L+VP+YA+ +GL+E K + I + Sbjct: 57 EKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIVIHS 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++D G+ NHSIP+ + + +P G +VHTGD+K D + D + Sbjct: 117 ESEIDFGSIKTTFFXTNHSIPDCLGIAFHTPEGTVVHTGDFKFDXTPVNNQQPDIHKMAK 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ I++ Sbjct: 177 IGSEGVLALLSESTNAXRPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQIVE 236 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGSQGE Sbjct: 237 ACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGSQGE 296 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC- 363 P +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 297 PMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSGSST 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRNG + Sbjct: 357 GVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRNGDV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + ++ G DG IG + + R+QLS G L + + + +I Sbjct: 417 VDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADGDII 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G Y D + K L K + T+ +L + + +L+ + AL + Sbjct: 477 SGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKYIYI 535 Query: 541 VWGKK 545 K+ Sbjct: 536 RIRKE 540 >gi|23014037|ref|ZP_00053877.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Magnetospirillum magnetotacticum MS-1] Length = 549 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 218/555 (39%), Positives = 326/555 (58%), Gaps = 6/555 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M EL FLPLGGVGEIGMN+A+YGYG KW+++DCGVSF + +P VD+V D T+ Sbjct: 1 MSEGELTFLPLGGVGEIGMNLAVYGYG----GKWLIVDCGVSFGDETMPMVDVVMADPTW 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + R L+ I +TH HEDH GA+ LW L PV+A+PF+ +L+ K + ++P Sbjct: 57 IEERRDKLVGIVLTHGHEDHLGAVQYLWDRLRCPVWATPFSASILKNKLHETGLHTQVPL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G + G F IE + + HSIPE L IR+P+G +VHTGDWK D D +LG TD Sbjct: 117 NVVELGSRFKAGPFEIEMISITHSIPEPNLLAIRTPLGTVVHTGDWKFDPDPLLGLATDT 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++L +G EG+LAL+ DSTN +G SE ++ ++ +++ G + V+ F+++V+R+ Sbjct: 177 EALRRVGKEGVLALIGDSTNVFTKGHSGSESEVRGSLIELLGRFDGRIAVSCFATNVARL 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 SI A R + L+G SL R+ A + G + FL++ P+++++ I TG Sbjct: 237 ESIAVAAMANDRSVALVGRSLWRIDKAARENGYLADLPPFLTEHDAAYLPKDKVVYICTG 296 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++ G+ +VKL + D IFSSR IPGNE I ++N LV GV V+ E Sbjct: 297 SQGEPRAALARIASGDHPHVKLGKGDVCIFSSRIIPGNEKDIYRLQNDLVRLGVEVVTEK 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP +++ MY+ +RP+ V +HGE HL H LA G+ NG Sbjct: 357 DEF-VHVSGHPAREEMEEMYRLLRPRFAVPVHGEARHLQEHARLARSMGVEEAIETCNGT 415 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 MLRL P P+E++D V G DG I + + RR++ F G V V+LD + Sbjct: 416 MLRLAPGPVEVVDHVPTGKLCVDGPRIVRIDSEILRNRRRMVFNGSAVVTVVLDKFGKLL 475 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ +G+ + + H +++ V + +LP RKD ++RE+ A+R L+ Sbjct: 476 NDPQLTALGLLDAAHEAEE-HDTVVEAVRDAIEELPLKVRKDDGVVREAARLAVRRSLRD 534 Query: 541 VWGKKPLVTVFINKI 555 GKKP+ V + ++ Sbjct: 535 THGKKPITDVHLVRV 549 >gi|295399869|ref|ZP_06809850.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312111619|ref|YP_003989935.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294978272|gb|EFG53869.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311216720|gb|ADP75324.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y4.1MC1] Length = 554 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 169/556 (30%), Positives = 284/556 (51%), Gaps = 12/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ LGGVGEIG NM + ++ID GV FP+D++ G+D V PDI+++++ Sbjct: 7 EKIRIFSLGGVGEIGKNMYVVE----LDDDILVIDAGVMFPEDEMLGIDKVIPDISYLVE 62 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIF+TH HE+H GA+ + + VPVY + +GL E+ + V+ I Sbjct: 63 RQDRIKAIFLTHGHEEHIGAIAYVLKKITVPVYGTKLTLGLAESILKEQGVT-NAKLIEI 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++ ++ + R HSIP+++ + I + G IV+T D+K D + D + Sbjct: 122 RSDSEIFFDKAKVTFFRTIHSIPDSVGISIHTSQGAIVYTSDFKFDQTPYGKNRADLGKM 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+L L+ DSTNA R G S+ + + I D++ NA G V V ++S+V+RI+ + Sbjct: 182 AQIGEQGVLCLLSDSTNAERPGYTGSDTVVAQEIADVIYNAGGRVFVACYASNVTRIQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ++ A+Q GRK+ ++G +L +V+ +A+ +G + +++ +S Y ++LI++ TG Sbjct: 242 LNAAKQYGRKVAVVGKTLHKVMDIAVRLGYLHLPEKVTISIHDIDRYDDKELIILTTGGH 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SALA++++ + V + + DTVI ++ +PG E+ + L G V+ E Sbjct: 302 GEPMSALARMAKQAHKQVNIKKGDTVIVAASVMPGYELIFSKTIDSLYRAGANVVY--RE 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M ++P+ + +HGE AH LA GI + G Sbjct: 360 RKVHVSGHGCQEELKLMLNLMKPKYFIPVHGEYRMQKAHANLAKAVGISEERTFLIDKGD 419 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ +V +G L DG IG ++ + RR LS G L V V L I Sbjct: 420 VIEFRNGVARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIVVVTLSKESKKI 479 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + + K V V Q + L+ ++ AL L Sbjct: 480 IAGPEIISRGF-VYVRESETLLDEATKIVANIVNKCLQTYVIEWSSLKSNVREALSQFLF 538 Query: 540 KVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 539 EKTKRKPMILPIIMEV 554 >gi|126698886|ref|YP_001087783.1| metallo beta-lactamase superfamily protein [Clostridium difficile 630] gi|115250323|emb|CAJ68145.1| Ribonuclease J family protein [Clostridium difficile] Length = 558 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ E+G NM + Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 7 NTNKIKVMALGGLNEVGKNMTVVEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL + ++VPVY + +IGL++ K ++ + Sbjct: 63 VKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKM-NNVKLN 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +E ++ NHSIP+ ++ I + G I HTGD+K+D I GDV D Sbjct: 122 VIGPRQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMH 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +C + +G+L ++ DSTNA + G +SEK + + ++ G ++V TF+S++ R+ Sbjct: 182 RICELSKKGVLLMLADSTNAEKPGFTMSEKTVGVGLDELFAKGNGRRIIVATFASNIHRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ RK+ + G S+ VV VA ++G + D + + Y +L++I T Sbjct: 242 QQIINTAEKFNRKVAISGRSMVNVVGVAKELGYLDISDDMLIDLNDICKYEDSELVIITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G V+ Sbjct: 302 GSQGEPMSALARMAFSEHKKVEIKSGDLVIISAHPIPGNEKLISRVINFLFEKGAEVVYS 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK ++ +RP+ + HGE L H E+A Q + ++ Sbjct: 362 DI-ADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEIAEQLGMDKENIFVMQ 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G +L L + ++ + + G L DG +G ++ + R+ LS G + V V + Sbjct: 421 TGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKDE 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 481 GKVLAGPDIISRGF-VYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKE 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 540 YLYQKTKRNPMILPIIMEV 558 >gi|256545150|ref|ZP_05472516.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis ATCC 51170] gi|256399191|gb|EEU12802.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis ATCC 51170] Length = 556 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 186/560 (33%), Positives = 301/560 (53%), Gaps = 11/560 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+GEIG N + Y + IMIDCG++FP +D+ GVD+V PD T++ Sbjct: 2 QNKLKVIPLGGLGEIGKNCTIVEY----KNEMIMIDCGLTFPDEDMLGVDIVIPDFTYVE 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + L IFITH HEDH G + L + VY S GLLE K ++ + Sbjct: 58 ENKDKLKGIFITHGHEDHIGGIAYLLKTVDTNVYCSKLTKGLLENKFKEHGLNPNRLKMV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + V VG S E +RV+HSIP++ A+ ++SP+G I+ TGD+K+D I G+ TD Sbjct: 118 -NVNNTVKVGNLSAEFIRVSHSIPDSCAIAVKSPIGTILFTGDFKMDFTPIDGEPTDIQK 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L ++G +G+L L DSTN EG+ +SEK + + ++ A G ++V TF+S++ R++ Sbjct: 177 LASLGRKGLLCLFSDSTNVEIEGSSMSEKEVGETFINLFGQAPGRIIVATFASNLHRVQQ 236 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +I AE+ +K+VL G S+ V +A +G +K ++ + ++ Y +Q++V++TG+ Sbjct: 237 VIFAAEKYNKKVVLSGRSMINNVKIASSLGYLKIRNNTLIDMKNIKDYSDDQIVVLSTGT 296 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ E + V L DTVI SS AIPGNE+ I + N L + G +I + Sbjct: 297 QGEPLSALTRMANNEHKQVHLNSSDTVILSSSAIPGNEMPINNTINNLTKIGCDIIYDSL 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VH SGH ++K M+Q P+ + HGEP L H E+A+ G+ + +NG Sbjct: 357 -AKVHASGHACQEEIKLMHQLTTPKYFIPAHGEPRQLKKHMEIAMDMGLNKENILVGQNG 415 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 + I +V G L DG IG ++ + R+ LS G L V++ ++ H Sbjct: 416 DVFEFTKKSARINGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSLTIEKHTQR 475 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + PEIV G Y + + + V+ T+ + + ++ I AL+S + Sbjct: 476 VLSNPEIVSRGF-IYVKENQDLIENSKDIVMRTMKKCEKKDIHAISQIKYQIREALKSYI 534 Query: 539 KKVWGKKPLVTVFINKISRQ 558 G+ P++ + ++ Sbjct: 535 YNQTGRDPMILPVLTEVDSN 554 >gi|288923289|ref|ZP_06417426.1| beta-lactamase domain protein [Frankia sp. EUN1f] gi|288345376|gb|EFC79768.1| beta-lactamase domain protein [Frankia sp. EUN1f] Length = 581 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 282/557 (50%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L + LGG+GEIG NM ++ + + +++DCGV FP+ D PGVDL+ PD T I Sbjct: 37 DGLRIIALGGLGEIGRNMTVFEHA----GRLLIVDCGVLFPETDQPGVDLILPDFTAIRD 92 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ A+ +THAHEDH GA+ L +P+ + + L+ AK R+ I Sbjct: 93 RLDDIEAVILTHAHEDHIGAVPYLLRERRDIPLIGTRLTLALMVAKLQEHRIQPVTLQI- 151 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 152 -REEERHSFGPFDCEFLAVNHSIPDAVAVAIRTDAGLVLHTGDFKMDQLPLDGRLTDLGG 210 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ L+ DSTNA G SE+ I + + + A+ ++V F+S V R++ Sbjct: 211 FARLGREGVDLLLSDSTNAEVPGFVASERTIAPVLDKVFREAERRIVVACFASHVHRVQQ 270 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D AE GR + +G S+ R + VA ++G+++ L + P + +I+TGS Sbjct: 271 VLDAAEAHGRSVCFIGRSMVRNMGVARELGLLQVPPGLVIDARDVDSLPDRNICLISTGS 330 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL++++ + ++++ DTV+ +S IPGNE A+ + N L G RV+ + Sbjct: 331 QGEPLSALSRMANRDH-SIRIEAGDTVVLASSLIPGNETAVYRVINGLTRWGARVVHKGV 389 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 VH SGH +L + RP ++ +HGE HL AH LA G+ V +G Sbjct: 390 -AMVHTSGHAPAGELLYVLNATRPSNMMPVHGEWRHLRAHGALAEATGVPPDRVILAEDG 448 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ L I V G+ DG +G + + RR L G +++ V++D Sbjct: 449 TVVDLIDGQASITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITVVVDAAAGK 508 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G D + + + D + D L++ + + + Sbjct: 509 VVVGPDLSARGFS----DARGAFDEVQGRLADALNDAMRSGMTDTNALQQLVRRTVGRWV 564 Query: 539 KKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 565 NERYRRRPMILPVVLEV 581 >gi|161618781|ref|YP_001592668.1| hypothetical protein BCAN_A0832 [Brucella canis ATCC 23365] gi|254704132|ref|ZP_05165960.1| hypothetical protein Bsuib36_09414 [Brucella suis bv. 3 str. 686] gi|260566619|ref|ZP_05837089.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261754798|ref|ZP_05998507.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|161335592|gb|ABX61897.1| Hypothetical protein BCAN_A0832 [Brucella canis ATCC 23365] gi|260156137|gb|EEW91217.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261744551|gb|EEY32477.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 558 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 280/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGEPMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|255655301|ref|ZP_05400710.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-23m63] Length = 556 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ E+G NM + Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 5 NTNKIKVMALGGLNEVGKNMTVVEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL + ++VPVY + +IGL++ K ++ + Sbjct: 61 VKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKM-NNVKLN 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +E ++ NHSIP+ ++ I + G I HTGD+K+D I GDV D Sbjct: 120 VIGPRQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +C + +G+L ++ DSTNA + G +SEK + + ++ G ++V TF+S++ R+ Sbjct: 180 RICELSKKGVLLMLADSTNAEKPGFTMSEKTVGIGLDELFAKGNGRRIIVATFASNIHRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ RK+ + G S+ VV VA ++G + D + + Y +L++I T Sbjct: 240 QQIINTAEKFNRKVAISGRSMVNVVGVAKELGYLDISDDMLIDLNDIYKYEDSELVIITT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G V+ Sbjct: 300 GSQGEPMSALARMAFSEHKKVEIKSGDLVIISAHPIPGNEKLISRVINFLFEKGAEVVYS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK ++ +RP+ + HGE L H E+A Q + ++ Sbjct: 360 DI-ADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEIAEQLGMDKENIFVMQ 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G +L L + ++ + + G L DG +G ++ + R+ LS G + V V + Sbjct: 419 TGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKDE 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 479 GKVLAGPDIISRGF-VYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 538 YLYQKTKRNPMILPIIMEV 556 >gi|306841945|ref|ZP_07474623.1| metallo-beta-lactamase family protein [Brucella sp. BO2] gi|306287978|gb|EFM59386.1| metallo-beta-lactamase family protein [Brucella sp. BO2] Length = 558 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 281/554 (50%), Positives = 395/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I D Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII-GDG 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|229164572|ref|ZP_04292466.1| Ribonuclease J 1 [Bacillus cereus R309803] gi|228618888|gb|EEK75820.1| Ribonuclease J 1 [Bacillus cereus R309803] Length = 555 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 160/560 (28%), Positives = 282/560 (50%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ + LGG+GEIG NM + Y + I++D G FP +L G+D V PD T+ Sbjct: 4 LQSGKTKIFALGGLGEIGKNMYVIEY----EDEIIIVDAGFKFPDSELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +FITH HEDH G + L+ + VP+YA A L+++K + Sbjct: 60 LERNKDKIKGLFITHGHEDHIGGVPFLFKCIQVPIYAGKLAAALIKSKFEEHNIRHVEIR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V + R HSIP+ +V+ +P GN+VHTGD+K D + + Sbjct: 120 NILDETE-VKFQHTKVRFYRTTHSIPDAFGIVVTTPNGNVVHTGDFKFDFTPAGTE-ANL 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ G +SEK + +++ +I A+G +L TF+S+V R+ Sbjct: 178 HKIAEIGKEGVLCLLSDSTNSEVPGFSMSEKKVGQSVKEIFSEAQGRILFATFASNVHRL 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + RK+V++G S+++ + + D+G I+ +F+ P Q+ +I T Sbjct: 238 QQVVEASILYNRKVVVVGRSMEKTIQIGRDLGYIQAPKDIFVGVHEINHIPSHQVTIICT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +++ DTV+ SS IPGN +++ N+L G VI Sbjct: 298 GSQGEPMAALSRIAYNNHRQIQIIPGDTVVLSSSPIPGNVLSVNRTINQLYRVGANVIHH 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M ++P+ + IHGE L H ELA++ G+ + Sbjct: 358 KI-SDIHTSGHGAQEEQKLMLSLLKPKYFMPIHGEYRMLKKHVELAVECGVPLENCFVMD 416 Query: 418 NGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++L + I + + DG IG ++ + RR LS G + +++ LD Sbjct: 417 NGQVLEISKGEARISSKTISSQAVYVDGSGIGDIGNIVLRDRRILSEEGIIIISLNLDCK 476 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P IV G Y ++ K + V + +L + +++++ L Sbjct: 477 QKRLVSQPAIVTRGF-VYMRGSEELMKKIEDIVEDCICNLLNEGIINWAQIKQTLVEVLS 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L G++P++ I ++ Sbjct: 536 PFLYSKTGRRPMLLPIIMEV 555 >gi|301299261|ref|ZP_07205547.1| ribonuclease J 1 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853105|gb|EFK80703.1| ribonuclease J 1 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 558 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 276/558 (49%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I++D G+ FP+DDL G+D V PD +++ Sbjct: 7 KNNETAVFAIGGLGEIGKNT----YGIQFQDEIIIVDAGIKFPEDDLLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VPVYA P A+ L+++K + + Sbjct: 63 IANQQKIKALVITHGHEDHIGGIPYLLQKINVPVYAGPLALALIKSKLEEHGLLRTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ R HSIP+T+ + +++P G IV TGD+K D + + Sbjct: 123 EIDEDSILKFRKTTVSFFRTTHSIPDTLGVAVKTPSGTIVCTGDYKFDLTPVTNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+L L+ DSTNA SE+ + ++I I + +G ++ TF+S++SR++ Sbjct: 183 KMAKLGDEGVLCLLSDSTNAEVPNFTKSERWVGRSIRRIFEKVEGRIIFATFASNISRVQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 A GRKI + G S++ + ++G + D + P +++++ TG Sbjct: 243 QATSAAIARGRKIAVFGRSMEAAIVNGRELGYLDIPDDALVDAREISSLPANKIMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V + DTV+FSS IPGN ++ + N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQVSIQPGDTVVFSSSPIPGNTTSVNKVINELEEAGATVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE L H ELA + + ++N Sbjct: 363 VN-NIHASGHGGQEEQKLMLRLMKPKYFMPVHGEYRMLKIHTELAEKCDVPKENSFILKN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D G DG +G ++ + RR LS G + V +D Sbjct: 422 GDVLALTKDSARYAGHFNAGDVYVDGSGVGDIGNVVLRDRRLLSEEGLVVVVATIDMQKR 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + ++ + + ++ +I S L+ Sbjct: 482 QIIAGPDLLSRGF-IYMRESGDLINQGRRHLYRSIKRELKNDKVSEAQIKNTIISDLQEF 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ + I Sbjct: 541 LFEQTERHPMILPMLVTI 558 >gi|306843754|ref|ZP_07476353.1| metallo-beta-lactamase family protein [Brucella sp. BO1] gi|306275945|gb|EFM57658.1| metallo-beta-lactamase family protein [Brucella sp. BO1] Length = 558 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 281/554 (50%), Positives = 395/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAIATPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I D Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII-GDG 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|23501704|ref|NP_697831.1| metallo-beta-lactamase family protein [Brucella suis 1330] gi|148559989|ref|YP_001258795.1| metallo-beta-lactamase family protein [Brucella ovis ATCC 25840] gi|225627314|ref|ZP_03785351.1| metallo-beta-lactamase family protein [Brucella ceti str. Cudo] gi|254701585|ref|ZP_05163413.1| metallo-beta-lactamase family protein [Brucella suis bv. 5 str. 513] gi|254706967|ref|ZP_05168795.1| metallo-beta-lactamase family protein [Brucella pinnipedialis M163/99/10] gi|254709925|ref|ZP_05171736.1| metallo-beta-lactamase family protein [Brucella pinnipedialis B2/94] gi|254713926|ref|ZP_05175737.1| metallo-beta-lactamase family protein [Brucella ceti M644/93/1] gi|254717016|ref|ZP_05178827.1| metallo-beta-lactamase family protein [Brucella ceti M13/05/1] gi|254718926|ref|ZP_05180737.1| metallo-beta-lactamase family protein [Brucella sp. 83/13] gi|256031418|ref|ZP_05445032.1| metallo-beta-lactamase family protein [Brucella pinnipedialis M292/94/1] gi|256369249|ref|YP_003106757.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|260168552|ref|ZP_05755363.1| metallo-beta-lactamase family protein [Brucella sp. F5/99] gi|261218823|ref|ZP_05933104.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261314430|ref|ZP_05953627.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317471|ref|ZP_05956668.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261321678|ref|ZP_05960875.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|261752138|ref|ZP_05995847.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261758025|ref|ZP_06001734.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|265983913|ref|ZP_06096648.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|265988507|ref|ZP_06101064.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294852174|ref|ZP_06792847.1| metallo-beta-lactamase [Brucella sp. NVSL 07-0026] gi|306838226|ref|ZP_07471078.1| metallo-beta-lactamase family protein [Brucella sp. NF 2653] gi|23347628|gb|AAN29746.1| metallo-beta-lactamase family protein [Brucella suis 1330] gi|148371246|gb|ABQ61225.1| metallo-beta-lactamase family protein [Brucella ovis ATCC 25840] gi|225617319|gb|EEH14364.1| metallo-beta-lactamase family protein [Brucella ceti str. Cudo] gi|255999409|gb|ACU47808.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|260923912|gb|EEX90480.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261294368|gb|EEX97864.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|261296694|gb|EEY00191.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261303456|gb|EEY06953.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738009|gb|EEY26005.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|261741891|gb|EEY29817.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|264660704|gb|EEZ30965.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|264662505|gb|EEZ32766.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|294820763|gb|EFG37762.1| metallo-beta-lactamase [Brucella sp. NVSL 07-0026] gi|306406670|gb|EFM62897.1| metallo-beta-lactamase family protein [Brucella sp. NF 2653] Length = 558 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 280/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|166031232|ref|ZP_02234061.1| hypothetical protein DORFOR_00919 [Dorea formicigenerans ATCC 27755] gi|166029079|gb|EDR47836.1| hypothetical protein DORFOR_00919 [Dorea formicigenerans ATCC 27755] Length = 547 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 174/556 (31%), Positives = 296/556 (53%), Gaps = 15/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ +IGMN+ + Y I++DCG++FP+D + G+DLV PD+T++ Sbjct: 1 MRIIPLGGLEKIGMNITAFEY----EDSIIVVDCGLAFPEDGMLGIDLVIPDVTYLKNNI 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH GAL + +++P+YA+ +G++E K + + + Sbjct: 57 EKVKGFVITHGHEDHIGALSYILREINIPIYATKLTMGIIEKKLTEHNLLRSTRRKVVKH 116 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +++G F IE ++ NHSI + AL I SP G +VHTGD+K+D + GD D Sbjct: 117 GQSINLGQFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQRFAE 176 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 IG +G+LAL+ DSTNA R+G SE+ + I + +++ TF+S+V R++ II Sbjct: 177 IGKKGVLALLSDSTNAERKGFTQSERTVGITFDHIFAEHQNTRIIIATFASNVDRVQQII 236 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A + RK+V+ G S+ ++ VA ++G + + + + YP E+ ++I TGSQG Sbjct: 237 NSACKYDRKVVVEGRSMVNIIQVAQELGYLNVPENTMIEIDQLKNYPPEKTVLITTGSQG 296 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ + V + DTVI SS IPGNE ++ + N L E+G VI + Sbjct: 297 ESMAALSRMAADIHKKVTIMPGDTVILSSNPIPGNEKSVSRVINELSEKGANVIFQ---- 352 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 HVSGH +LK +Y ++P+ V +HGE H A+ LA GI V + +G + Sbjct: 353 DAHVSGHACQEELKLIYSLVKPKYAVPVHGEYRHRKANANLAKSLGIPKENVFMLHSGDV 412 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L + +++D+V G L DG +G ++ + R+ L+ G + V + L+ + Sbjct: 413 LEVSEQEAKVVDKVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVLTLERGSNQLL 472 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLK 539 P+IV G Y + + + + V V D +R D ++ I + + Sbjct: 473 AGPDIVSRGF-VYVRESEDLMEEARQVVTDAVEDCLNHQRNADWSKIKLVIRDTMNEFIW 531 Query: 540 KVWGKKPLVTVFINKI 555 K ++P++ I + Sbjct: 532 KKTKRRPMILPIIMDV 547 >gi|254974834|ref|ZP_05271306.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-66c26] gi|255092222|ref|ZP_05321700.1| metallo beta-lactamase superfamily protein [Clostridium difficile CIP 107932] gi|255100307|ref|ZP_05329284.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-63q42] gi|255306246|ref|ZP_05350418.1| metallo beta-lactamase superfamily protein [Clostridium difficile ATCC 43255] gi|255313961|ref|ZP_05355544.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-76w55] gi|255516641|ref|ZP_05384317.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-97b34] gi|255649740|ref|ZP_05396642.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-37x79] gi|306519849|ref|ZP_07406196.1| metallo beta-lactamase superfamily protein [Clostridium difficile QCD-32g58] Length = 556 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ E+G NM + Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 5 NTNKIKVMALGGLNEVGKNMTVVEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL + ++VPVY + +IGL++ K ++ + Sbjct: 61 VKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKM-NNVKLN 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +E ++ NHSIP+ ++ I + G I HTGD+K+D I GDV D Sbjct: 120 VIGPRQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMH 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +C + +G+L ++ DSTNA + G +SEK + + ++ G ++V TF+S++ R+ Sbjct: 180 RICELSKKGVLLMLADSTNAEKPGFTMSEKTVGVGLDELFAKGNGRRIIVATFASNIHRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ RK+ + G S+ VV VA ++G + D + + Y +L++I T Sbjct: 240 QQIINTAEKFNRKVAISGRSMVNVVGVAKELGYLDISDDMLIDLNDICKYEDSELVIITT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G V+ Sbjct: 300 GSQGEPMSALARMAFSEHKKVEIKSGDLVIISAHPIPGNEKLISRVINFLFEKGAEVVYS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK ++ +RP+ + HGE L H E+A Q + ++ Sbjct: 360 DI-ADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEIAEQLGMDKENIFVMQ 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G +L L + ++ + + G L DG +G ++ + R+ LS G + V V + Sbjct: 419 TGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKDE 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 479 GKVLAGPDIISRGF-VYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 538 YLYQKTKRNPMILPIIMEV 556 >gi|255326367|ref|ZP_05367451.1| ribonuclease J [Rothia mucilaginosa ATCC 25296] gi|255296584|gb|EET75917.1| ribonuclease J [Rothia mucilaginosa ATCC 25296] Length = 571 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 304/559 (54%), Gaps = 14/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + L +PLGG+GE+G NM +Y + K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 14 LKKDTLRVVPLGGLGEVGRNMTVYEI----NGKLLIVDCGVLFPEESQPGVDLILPDFSY 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I+ +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 70 IVDRLDDVVAMVLTHGHEDHIGAVPYLLRRRPDIPLVGSELTLALVEAKLAEHRIKPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G F E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 130 AV--KEHQVERFGPFECEFVAVNHSIPDALAVYIRTKAGKVLHTGDFKMDQLPLDGRITD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G +EK I + ++ ++A G ++V +FSS V R Sbjct: 188 LRHFARLGEEGVDLFLPDSTNAEVPGFTPTEKHIGPVLSNVFRDASGRIIVASFSSHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+VL+G S+ R +++A +G +K + + + Y +Q++++ Sbjct: 248 VQQVLDAAAERGRKVVLVGRSMVRNMTIAEKLGYLKVPANVLVDLKKVDDYRPDQIVMMC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ + +++ DTV+ +S IPGNE ++ I N L++ G V+ Sbjct: 308 TGSQGEPMAALSRMANGDHK-IQIEPGDTVVLASSLIPGNETSVFRIINALMKLGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HL+A +LA++ G+ V Sbjct: 367 KG-NAKVHVSGHAAAGELLYCYNILKPKNVMPVHGEVRHLIASGDLAMETGVPKKNVLLC 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L ++ EV DG +G+ + + RR L G +S+ ++D Sbjct: 426 ESGTVVDLRDGVASVVGEVPCEYLYVDGRSVGEVTESDLKDRRILGEEGFVSIVTVVDRA 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+I GI D +I + + + P + ++ L++ + + Sbjct: 486 TKRVVTGPDIHARGIAEDDAVFDEIVPKITAALEDALHRAP-EKVHTVQQLQQIVRRTIG 544 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + +KP++ + + Sbjct: 545 AWISRRLRRKPMIVPVVVE 563 >gi|90961623|ref|YP_535539.1| metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227890710|ref|ZP_04008515.1| metallo-beta-lactamase [Lactobacillus salivarius ATCC 11741] gi|90820817|gb|ABD99456.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227867648|gb|EEJ75069.1| metallo-beta-lactamase [Lactobacillus salivarius ATCC 11741] Length = 558 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 276/558 (49%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I++D G+ FP+DDL G+D V PD +++ Sbjct: 7 KNNETAVFAIGGLGEIGKNT----YGIQFQDEIIVVDAGIKFPEDDLLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VPVYA P A+ L+++K + + Sbjct: 63 IANQQKIKALVITHGHEDHIGGIPYLLQKINVPVYAGPLALALIKSKLEEHGLLRTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ R HSIP+T+ + +++P G IV TGD+K D + + Sbjct: 123 EIDEDSILKFRKTTVSFFRTTHSIPDTLGVAVKTPSGTIVCTGDYKFDLTPVTNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+L L+ DSTNA SE+ + ++I I + +G ++ TF+S++SR++ Sbjct: 183 KMAKLGDEGVLCLLSDSTNAEVPNFTKSERWVGRSIRRIFEKVEGRIIFATFASNISRVQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 A GRKI + G S++ + ++G + D + P +++++ TG Sbjct: 243 QATSAAIARGRKIAVFGRSMEAAIVNGRELGYLDIPDDALVDAREISSLPANKIMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V + DTV+FSS IPGN ++ + N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQVSIQPGDTVVFSSSPIPGNTTSVNKVINELEEAGATVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE L H ELA + + ++N Sbjct: 363 VN-NIHASGHGGQEEQKLMLRLMKPKYFMPVHGEYRMLKIHTELAEKCDVPKENSFILKN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D G DG +G ++ + RR LS G + V +D Sbjct: 422 GDVLALTKDSARYAGHFNAGDVYVDGSGVGDIGNVVLRDRRLLSEEGLVVVVATIDMQKR 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + ++ + + ++ +I S L+ Sbjct: 482 QIIAGPDLLSRGF-IYMRESGDLINQGRRHLYRSIKRELKNDKVSEAQIKNTIISDLQEF 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ + I Sbjct: 541 LFEQTERHPMILPMLVTI 558 >gi|296451285|ref|ZP_06893025.1| metallo-beta-lactamase [Clostridium difficile NAP08] gi|296880363|ref|ZP_06904326.1| metallo-beta-lactamase [Clostridium difficile NAP07] gi|296259891|gb|EFH06746.1| metallo-beta-lactamase [Clostridium difficile NAP08] gi|296428604|gb|EFH14488.1| metallo-beta-lactamase [Clostridium difficile NAP07] Length = 573 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ E+G NM + Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 22 NTNKIKVMALGGLNEVGKNMTVVEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 77 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL + ++VPVY + +IGL++ K ++ + Sbjct: 78 VKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKM-NNVKLN 136 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +E ++ NHSIP+ ++ I + G I HTGD+K+D I GDV D Sbjct: 137 VIGPRQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMH 196 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +C + +G+L ++ DSTNA + G +SEK + + ++ G ++V TF+S++ R+ Sbjct: 197 RICELSKKGVLLMLADSTNAEKPGFTMSEKTVGIGLDELFAKGNGRRIIVATFASNIHRL 256 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ RK+ + G S+ VV VA ++G + D + + Y +L++I T Sbjct: 257 QQIINTAEKFNRKVAISGRSMVNVVGVAKELGYLDISDDMLIDLNDIYKYEDSELVIITT 316 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G V+ Sbjct: 317 GSQGEPMSALARMAFSEHKKVEIKSGDLVIISAHPIPGNEKLISRVINFLFEKGAEVVYS 376 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK ++ +RP+ + HGE L H E+A Q + ++ Sbjct: 377 DI-ADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEIAEQLGMDKENIFVMQ 435 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G +L L + ++ + + G L DG +G ++ + R+ LS G + V V + Sbjct: 436 TGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKDE 495 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 496 GKVLAGPDIISRGF-VYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKE 554 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 555 YLYQKTKRNPMILPIIMEV 573 >gi|260438497|ref|ZP_05792313.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] gi|292809086|gb|EFF68291.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] Length = 556 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 187/560 (33%), Positives = 301/560 (53%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+ +IGMNM + Y + +++DCG+SFP DD+ GVDLV PD+TF+ Sbjct: 6 NTGSVKIIPLGGLEQIGMNMTAFMY----EDEIVVVDCGLSFPDDDMLGVDLVIPDVTFL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + +TH HEDH GA + ++ P+YA+ +G++E K + Sbjct: 62 KDNIDKVKGFVVTHGHEDHIGAFPYVIKDVNKPIYATKLTMGIIETKFREHNLIATTKRK 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G F IE +R NHSI ++ AL I +P G I HTGD+K+D + G+ D Sbjct: 122 IVNYGQSIILGKFRIEFIRTNHSIADSAALAIHTPAGVIFHTGDFKVDYTPVFGEPIDLQ 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRI 240 + IG +G+LAL+CDSTN MR G +SEK + K +I +N K ++V TF+S+V R+ Sbjct: 182 RMGEIGKKGVLALLCDSTNVMRPGYTMSEKTVGKTFENIFDENKKNRIIVATFASNVDRV 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + II+ A GRK+ + G S+ +++VA ++G I+ D + E YP +Q+ +I T Sbjct: 242 QQIINAACSHGRKVAVEGRSMVNIINVAGELGYIQIPDGTLIDTEEIKKYPDDQVTIITT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ + V + D VI S+ IPGNE ++ + N L +G +VI + Sbjct: 302 GSQGESMAALSRMAASIHKKVTIKPGDVVIVSATPIPGNEKSVARLINELSMKGAKVIFQ 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH ++K MY ++P+ + +HGE HLV H ELA GI + + Sbjct: 362 ----DTHVSGHASQEEIKMMYTILKPKYSIPVHGEYRHLVKHAELAESMGIDKKNIFILS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G +L L + +++D V G + DG +G ++ I R+ LS G + V + LD + Sbjct: 418 SGDVLELSEEEGKVVDTVPCGELMVDGLGVGDVGNIVIRDRQVLSENGIVVVVLTLDKYT 477 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 N + P+IV G Y + + + V V++ + D ++ I +L Sbjct: 478 NQLLSGPDIVTRGF-VYVRESETLIEEATDVVYHAVINCLENSNVDWAKIKLVIKDSLGE 536 Query: 537 LLKKVWGKKPLVTVFINKIS 556 K + P+V I ++S Sbjct: 537 YFWKKMKRTPMVLPIIMEVS 556 >gi|319782997|ref|YP_004142473.1| RNA-metabolising metallo-beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168885|gb|ADV12423.1| RNA-metabolising metallo-beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 556 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 293/553 (52%), Positives = 385/553 (69%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N ELVF+PLGGVGEIGMN ALYGYG PS+R+WI+ID GV+FP LPGVDLV PD FI Sbjct: 5 ENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIVIDVGVTFPDASLPGVDLVLPDTRFI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + NL I ITHAHEDHYGAL D W L PV+ +PF+ GLLEAKR E+ + KIP Sbjct: 65 EENLANLRGIIITHAHEDHYGALLDTWPKLKAPVWMTPFSAGLLEAKRQGEQGAPKIPVT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+K VG F IE++ V HSIPE M+L I SP G ++HTGDWK+D + +G TD+ Sbjct: 125 IYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPKTDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A G++G+LAL+CDSTNA+REG SE + + + +++ AKG V VTTFSS+V RI Sbjct: 185 RFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTTFSSNVGRIV 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI A GR+ ++LG SLKRV+ VA ++G + F+++E FG PRE L++I TGS Sbjct: 245 SIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVIICTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+LSR EM++V L DTV+FSSR IPGNE AI IKNRL++ GV++I ED Sbjct: 305 QGEPLAALAKLSREEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGVKII-EDG 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L++MY+W+RPQ+ V +HGE HLVA L GI V VR+G M Sbjct: 364 DALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P I+D+V G KDG LIG +GI RR+LSF GH++VNV+LD+ Y + G Sbjct: 424 LRLAPGPATIMDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYELAG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+ DG G + L++ I V +P+ RRKDL L++E++ A+R + Sbjct: 484 DPDLVAIGVAEADGRGESLEDLMIDAAIGAVDSIPRQRRKDLDLVQEAVRRAVRGAANEA 543 Query: 542 WGKKPLVTVFINK 554 WGKKPLVTVF+ + Sbjct: 544 WGKKPLVTVFVTR 556 >gi|254393058|ref|ZP_05008219.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces clavuligerus ATCC 27064] gi|326443816|ref|ZP_08218550.1| metallo-beta-lactamase family hydrolase [Streptomyces clavuligerus ATCC 27064] gi|197706706|gb|EDY52518.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces clavuligerus ATCC 27064] Length = 561 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 287/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L PLGG+GEIG NM ++ Y + +++DCGV FP+D+ PG+DL+ PD T Sbjct: 14 LRKGGLRVTPLGGLGEIGRNMTVFEY----DGRLLIVDCGVLFPEDEQPGIDLILPDFTT 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDDVEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G++ +G F E + VNHSIP+ +A+ IR+P G VHTGD+K+D + G +TD Sbjct: 130 EV--AEGNRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V R Sbjct: 188 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFANAQKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G ++ L + ++ P +++++ Sbjct: 248 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDHEVVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + Sbjct: 367 KG-NAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L I+ +V G DG +G + + RR L G +S+ V++D+ Sbjct: 426 EDGVVVDLVDGRARIVGKVQAGYVYVDGLSVGDVTEASLKDRRILGDEGIISIFVVVDST 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P + G D + G + V + + L++ I + Sbjct: 486 TGKIVGGPHLQARGSGIDDSNFGGVLPK----VEEALAKSAADGVAEPHQLQQLIRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVSDTYRRRPMILPVVVEV 561 >gi|300214434|gb|ADJ78850.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius CECT 5713] Length = 558 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 276/558 (49%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I++D G+ FP+DDL G+D V PD +++ Sbjct: 7 KNNETAVFAIGGLGEIGKNT----YGIQFQDEIIVVDAGIKFPEDDLLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VPVYA P A+ L+++K + + Sbjct: 63 IANQQKIKALVITHGHEDHIGGIPYLLQKINVPVYAGPLALALIKSKLEEHGLLRTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ R HSIP+T+ + +++P G IV TGD+K D + + Sbjct: 123 EIDEDSILKFRKTTVSFFRTTHSIPDTLGVAVKTPSGTIVCTGDYKFDLTPVTNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+L L+ DSTNA SE+ + ++I I + +G ++ TF+S++SR++ Sbjct: 183 KMAKLGDEGVLCLLSDSTNAEVPNFTKSERWVGRSIRRIFEKVEGRIIFATFASNISRVQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 A GRKI + G S++ + ++G + D + P +++++ TG Sbjct: 243 QATSAAIARGRKIAVFGRSMEAAIVNGRELGYLDIPDDALVDAREISSLPANKIMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V + DTV+FSS IPGN ++ + N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQVSIQPGDTVVFSSSPIPGNTTSVNKVINELEEAGATVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE L H ELA + + ++N Sbjct: 363 VN-NIHASGHGGQEEQKLMLRLMKPKYFMPVHGEYRMLKIHTELAEKCDVPKENSFILKN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D G DG +G ++ + RR LS G + V +D Sbjct: 422 GDVLALTKDSARYAGHFNAGDVYVDGSGVGDIGNVVLRDRRLLSEEGLVVVVATIDMQKR 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G + + + ++ + + ++ +I S L+ Sbjct: 482 QIIAGPDLLSRGF-IYMRESGDLINQGRRHLYRSIKRELKNDKVSETQIKNTIISDLQEF 540 Query: 538 LKKVWGKKPLVTVFINKI 555 L + + P++ + I Sbjct: 541 LFEQTERHPMILPMLVTI 558 >gi|115524545|ref|YP_781456.1| beta-lactamase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518492|gb|ABJ06476.1| beta-lactamase domain protein [Rhodopseudomonas palustris BisA53] Length = 556 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 244/555 (43%), Positives = 360/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL F+PLGGVGEIGMN+ +YG G+ R W+ +D GVSF ++ PG+DL+ DI F Sbjct: 3 RPDELTFVPLGGVGEIGMNLYVYGIGTGPQRSWLAVDLGVSFGDEEHLPGIDLIMADIAF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KERKNL+ + +TH HEDH+GA+ DLW L P+YA+ F+ L AK ERV KIP Sbjct: 63 LEKERKNLVGLVLTHVHEDHFGAIMDLWPRLKCPIYATQFSAALFRAKCEAERVPPKIPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++G VD+G F++E V V HSIPE AL IR+ G ++HTGDWK+D I+G TD+ Sbjct: 123 TVVRSGGSVDIGPFNVEFVPVAHSIPEAHALAIRTTAGLVLHTGDWKIDPMPIVGKPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + KNI +++K AKG V VTTF+S+VSR+ Sbjct: 183 KRLRELGDEGVLALIGDSTNAVRDGRSPSETEVAKNIAELVKKAKGRVAVTTFASNVSRL 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A + GR++V++G +++R+V VA + G + Q F + E +G +P ++++ + TG Sbjct: 243 RAVADAAREAGREVVVVGRAMERMVQVARETGYMDGVQNFRNAEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++ + V L + D VIFSSR IPGNE ++G I N L++ GV VI + Sbjct: 303 SQGEPRAALARIANDDHPQVTLNKGDCVIFSSRTIPGNEKSVGAIINGLIDLGVEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + +HVSGHP ++++ M W+RPQ+L+ +HGE LHL H +LA G+ V RNG Sbjct: 363 -DHLIHVSGHPRRDEMRDMISWVRPQLLIPVHGEALHLHEHAKLARAAGVPKVLTCRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P IID+V G KDG ++ + + +RR+L+F G + L + +F Sbjct: 422 LVRLGPGEPAIIDKVPSGRLYKDGEILEESKSRAVVERRKLAFAGCAFIAFALTDKGELF 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP + G + L V+ TV LP+ +R+D + E++ A+RS L Sbjct: 482 DDPEVDLVGIPEKNMAGEAMDDLAYDAVVATVETLPRAKRRDPDAVAEAVRRAVRSALNA 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPLV V + + Sbjct: 542 EWGKKPLVHVHVLTV 556 >gi|260682896|ref|YP_003214181.1| metallo beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260686494|ref|YP_003217627.1| metallo-beta-lactamase superfamily protein [Clostridium difficile R20291] gi|260209059|emb|CBA62187.1| metallo beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260212510|emb|CBE03446.1| metallo beta-lactamase superfamily protein [Clostridium difficile R20291] Length = 573 Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG+ E+G NM + Y + I+ID G+SFP+D++ GVD+V PDIT++ Sbjct: 22 NTNKIKVMALGGLNEVGKNMTVVEY----KDEIIVIDAGLSFPEDEMLGVDIVIPDITYL 77 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + IFITH HEDH GAL + ++VPVY + +IGL++ K ++ + Sbjct: 78 VKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKM-NNVKLN 136 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +E ++ NHSIP+ ++ I + G I HTGD+K+D I GDV D Sbjct: 137 VIGPRQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMH 196 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 +C + +G+L ++ DSTNA + G +SEK + + ++ G ++V TF+S++ R+ Sbjct: 197 RICELSKKGVLLMLADSTNAEKPGFTMSEKTVGVGLDELFAKGNGRRIIVATFASNIHRL 256 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + II+ AE+ RK+ + G S+ VV VA ++G + D + + Y +L++I T Sbjct: 257 QQIINTAEKFNRKVAISGRSMVNVVGVAKELGYLDISDDMLIDLNDICKYEDSELVIITT 316 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ D VI S+ IPGNE I + N L E+G V+ Sbjct: 317 GSQGEPMSALARMAFSEHKKVEIKSGDLVIISAHPIPGNEKLISRVINFLFEKGAEVVYS 376 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 D +HVSGH +LK ++ +RP+ + HGE L H E+A Q + ++ Sbjct: 377 DI-ADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEIAEQLGMDKENIFVMQ 435 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G +L L + ++ + + G L DG +G ++ + R+ LS G + V V + Sbjct: 436 TGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKDE 495 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + + + + + K+ L+ +I L+ Sbjct: 496 GKVLAGPDIISRGF-VYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKE 554 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I ++ Sbjct: 555 YLYQKTKRNPMILPIIMEV 573 >gi|326791234|ref|YP_004309055.1| ribocuclease J [Clostridium lentocellum DSM 5427] gi|326541998|gb|ADZ83857.1| Ribocuclease J [Clostridium lentocellum DSM 5427] Length = 556 Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 181/559 (32%), Positives = 295/559 (52%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+GEIG NM L+ Y ++DCG++FP+D++ G+DLV PDIT++M Sbjct: 7 KSKLRIIPLGGLGEIGKNMTLFEY----EDDMFIVDCGLAFPEDEMLGIDLVIPDITYVM 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K + + I +TH HEDH GAL + L+VP+Y + IGL+E K + + IS Sbjct: 63 KNIQKVRGIVLTHGHEDHIGALPYVLQELNVPIYGTKLTIGLVENKLKEHNLLRTTERIS 122 Query: 123 FQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+ + +G F IE +R NHSI + + L I +P G +VHTGD+K+D I G D Sbjct: 123 VMQGETIKLGSNFKIEFIRSNHSIADAVMLSIWTPAGIVVHTGDFKVDFTPISGATLDLH 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTFSSSVSRI 240 L IG + +LALM DSTN R G SEK + DI N ++V TF+S++ R+ Sbjct: 183 RLAEIGRKKVLALMADSTNVERPGYTQSEKMVGAKFEDIFANNIDKRIMVATFASNIDRV 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I++ A + RK+ ++G S+ VV A ++G I + + Y +Q+++I T Sbjct: 243 QQIVNAAYKYKRKVAVIGRSMVNVVKTASELGYITIPENTLIEINDVKRYKDDQVVLIMT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ + + + + D +I SS IPGNE + + N L ++G +VI E Sbjct: 303 GSQGEPMAALSRMATSDHKQIDIKPGDVIILSSTPIPGNEKTVSKVVNELCKKGAKVIRE 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 HVSGH +LK ++ I+P+ + +HGE HL H ELA++ + Sbjct: 363 ----DTHVSGHAAQEELKLIHTLIKPKYFIPVHGEYRHLQKHTELAMELGMKRNNIIIPS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 G+++ L PD I+++ V G L DG +G ++ + R+ LS G L V + L+ Sbjct: 419 IGEVIELGPDNIKVVGNVPSGQVLVDGLGVGDVGNIVLRDRKHLSQDGLLIVVMTLEKES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + + V + + ++ + LR Sbjct: 479 GMVVAGPDIISRGF-VYVREAENLMDEAKAVVRKALDRCEDKHIVEWSQIKTIVKDDLRE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + + P++ I ++ Sbjct: 538 FVWQRTKRSPMILPIIMEV 556 >gi|296129377|ref|YP_003636627.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena DSM 20109] gi|296021192|gb|ADG74428.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena DSM 20109] Length = 561 Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 164/554 (29%), Positives = 289/554 (52%), Gaps = 17/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+G NMA+ + + ++IDCGV FP+D PGVDL+ PD +I Sbjct: 19 LRVVPLGGLGEVGRNMAVLEHA----GRLLVIDCGVLFPEDHQPGVDLILPDFDYIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S + +EAK R++ + + Sbjct: 75 DDIDAIVLTHGHEDHIGAVPYLLRLRRDIPLVGSQLTLAFVEAKLKEHRIAPLTLPV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +G F E V VNHSIP+ +A+ + + G ++HTGD+K+D + G +TD + Sbjct: 133 EGQVEQLGPFECEFVAVNHSIPDALAVAVHTAAGTVLHTGDFKMDQLPLDGRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G G+ M DSTNA G E+ I + + + G V+V +F+S V R++ +I Sbjct: 193 RLGERGVDLFMVDSTNAEVPGFVTPEREIGPVLDQVFAESTGRVVVASFASHVHRVQQVI 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A RK+ L+G S+ R + +A ++G ++ D L + + P ++++++ TGSQG Sbjct: 253 DAAVANERKVALVGRSMVRNMGIASELGYLRVPDGLLVDLKQMENLPDDRVVLMCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ G+ + V + DTVI +S IPGNE A+ + N L+ G RV+ Sbjct: 313 EPMAALSRIANGDHK-VSVGPGDTVILASSLIPGNENAVFRVINGLMRLGARVVHSG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +RP+ ++ +HGE HL+A+ LA++ G+ V +G + Sbjct: 371 KVHVSGHASAGELLYCYNILRPRNVMPVHGEVRHLIANAALAVRTGVPADRVVLAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V G DG +G+ ++ + RR L G +S+ ++ + + Sbjct: 431 VDLVDGRASVVGAVPCGYVYVDGSSVGELTEVELKDRRILGDEGFVSIFAVVSSGDGKVL 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I G+ + + +L + + + + D L++ + + + Sbjct: 491 AGPQIHARGVA----EQDGVFDEILPVLTEALEEAARSGATDTHQLQQVMRRVVGRWVSN 546 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 547 KLRRRPMIIPVVVE 560 >gi|317125306|ref|YP_004099418.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] gi|315589394|gb|ADU48691.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] Length = 561 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 174/557 (31%), Positives = 296/557 (53%), Gaps = 17/557 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L + LGG+GEIG NM + + + +++DCGV FP+D PGVDL+ PD +++ Sbjct: 16 DNGLRVVALGGLGEIGRNMTVLE----TKGRLLIVDCGVLFPEDHHPGVDLILPDFSYLQ 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ AI +TH HEDH GA+ L +P+ S + L+EAK R+ + Sbjct: 72 DRLDDVEAIVLTHGHEDHIGAVPYLLRLKGDIPLIGSTLTLALVEAKLKEHRIRPFTLAV 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G + VGAF +E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 132 --KEGQRERVGAFDLEFVAVNHSIPDALAVFVRTEAGTLLHTGDFKMDQLPLDGRITDLR 189 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+ + DSTNA G E I I + ++A+ ++V FSS V R++ Sbjct: 190 AFARLGQEGVDLFLTDSTNADMPGFTTPELEIAPAIDKVFRHAQRRIIVACFSSHVHRVQ 249 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A + GRK+ +G S+ R + +A ++G + + + + + G P +L++I+TG Sbjct: 250 QVLDAAAKAGRKVAFVGRSMVRNMGIAAELGYLHVPEGILIDLKRIGDLPDNELVLISTG 309 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ GE R + + DTV+ +S IPGNE A+ + N L+ G V+ + Sbjct: 310 SQGEPMAALSRMANGEHR-INVGPGDTVLLASSLIPGNENAVYRVINGLMRLGANVVHKG 368 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +L Y ++P+ ++ +HGE H+ A+ +LA+Q G+ V + Sbjct: 369 -NAKVHVSGHASAGELLYCYNIVKPRNVMPVHGEWRHMFANAQLAIQTGVPERNVVLAED 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ L I V G DG IG + + RR L G ++ V+LD Sbjct: 428 GVVVDLVDGHARITGVVDCGYIYVDGTNIGGTDEALLKDRRILRDEGFITCIVVLDAATG 487 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G + +I + ++ V + + +D + L++ I A+ S Sbjct: 488 KIASGPEITARGFV----ESEEIFQQVIPKVERAIEEAVANGVRDDQQLQQVIRRAVGSW 543 Query: 538 LKKVWGKKPLVTVFINK 554 + ++P++ + + Sbjct: 544 VGGKIRRRPMIIPVVLQ 560 >gi|163843090|ref|YP_001627494.1| hypothetical protein BSUIS_A0856 [Brucella suis ATCC 23445] gi|163673813|gb|ABY37924.1| Hypothetical protein BSUIS_A0856 [Brucella suis ATCC 23445] Length = 558 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 280/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DTLVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|256060929|ref|ZP_05451087.1| metallo-beta-lactamase family protein [Brucella neotomae 5K33] gi|261324929|ref|ZP_05964126.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] gi|261300909|gb|EEY04406.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] Length = 558 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 279/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VT+F+N+I Sbjct: 544 WGKKPVVTIFVNRI 557 >gi|331002895|ref|ZP_08326408.1| hypothetical protein HMPREF0491_01270 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413188|gb|EGG92562.1| hypothetical protein HMPREF0491_01270 [Lachnospiraceae oral taxon 107 str. F0167] Length = 704 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 185/551 (33%), Positives = 285/551 (51%), Gaps = 14/551 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ +IGMN+ + Y I++DCG++FP DD+ G+DLV PDIT++ + Sbjct: 162 PLGGLEQIGMNITAFEY----DDSIIVVDCGLAFPSDDMLGIDLVIPDITYLKDNYLKVK 217 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 ITH HEDH GAL + L+VPVY + L+E K ++ + GD V Sbjct: 218 GFCITHGHEDHIGALPYILKQLNVPVYGTRLTCALIEKKLKEHQIEDSAKLNIVKYGDNV 277 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 +G F +E V+ NHSI + +L I +P G I HTGD+K+D + GD D + IG Sbjct: 278 SLGDFKVEFVKTNHSIADAASLAIFTPAGTIFHTGDFKVDYTPVFGDPADLGRMAEIGKA 337 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRIRSIIDIAE 248 G LA++ DSTNA R G +SEK + K I ++V TF+S+V R++ II+ A Sbjct: 338 GCLAMLSDSTNATRPGFTMSEKTVGKTFDLIFAEHRDSRIIVATFASNVDRVQQIINTAY 397 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + RK+V+ G S+ V+ A D+G I + + + YP E+ ++I TGSQGE + Sbjct: 398 KYDRKVVVEGRSMVNVIGTAADLGYIDIPEGTLIDIDHLKDYPLEKTVIITTGSQGESMA 457 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 AL++++ R V++ +D +I SS IPGNE A+ + N L +G VI + HV Sbjct: 458 ALSRMASSIHRKVEIVPEDVIIMSSTPIPGNEKAVSKVINELSMKGAEVIFQ----DTHV 513 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLF 425 SGH ++K MY ++P+ + +HGE HL+A K LA GI V + +G ++ L Sbjct: 514 SGHACQEEIKLMYSLLKPKFALPVHGEYRHLMAGKGLAEAVGIPSENVLIMSSGDVVELS 573 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPE 484 D +I V G DG +G ++ + R+ LS G + V + L++ + P+ Sbjct: 574 EDSCKITGHVEAGGVFVDGLGVGDVGNIVLRDRQSLSQNGIIIVAMSLEHGTNRLLSGPD 633 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 IV G Y + + V V D R D ++ + +L L K + Sbjct: 634 IVSRGF-VYVRESTDLMNEASAVVREAVADCLHARITDWSKIKNVVRDSLSEFLWKRMKR 692 Query: 545 KPLVTVFINKI 555 P++ I +I Sbjct: 693 NPVILPIIMEI 703 >gi|229820951|ref|YP_002882477.1| beta-lactamase [Beutenbergia cavernae DSM 12333] gi|229566864|gb|ACQ80715.1| beta-lactamase domain protein [Beutenbergia cavernae DSM 12333] Length = 561 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 167/554 (30%), Positives = 294/554 (53%), Gaps = 17/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+G NMA++ Y + +++DCGV FP+D PGVDL+ PD +++ Sbjct: 19 LRIVPLGGLGEVGRNMAVFEY----DGRLLIVDCGVLFPEDHQPGVDLILPDFSYLDGRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S + L+AK R++ +S Sbjct: 75 DDIEAIVLTHGHEDHIGAVPYLLRLRGDIPLVGSRLTLAFLDAKLREHRLTPHPVQVS-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +++G F++E V VNHSIP+ +A+ + + G ++HTGD+K+D + G +TD Sbjct: 133 EGASIELGPFALEFVAVNHSIPDALAVAVTTGAGTVLHTGDFKMDQLPLDGRITDLREFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G G+ M DSTNA G SE+ I + + NA G ++V +FSS V R++ ++ Sbjct: 193 RLGERGVDLFMVDSTNAEVPGFTTSEREIGPVLDQVFGNATGRLVVASFSSHVHRVQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A R++ L+G S+ R +++A ++G + D + + + P ++++++ TGSQG Sbjct: 253 DAAWAHRRRVALVGRSMVRNMTIAAELGYLTVPDGVLIDVKKVDSLPPDEVVLMCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + R V + DTV+ +S IPGNE A+ + N L+ G +VI + Sbjct: 313 EPMAALSRIANRDHR-VSVGPGDTVVLASSLIPGNENAVFRVINGLMRLGAQVIHQG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +RP+ ++ +HGE HLVA+ LA++ G+ V +G + Sbjct: 371 RVHVSGHASAGELLYAYNIVRPRNVMPVHGEVRHLVANGALAVKTGVDPDRVVLAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L I V G DG +G+ D + RR L+ G +SV ++D + + Sbjct: 431 VDLVDGRARIAGAVPCGYVYVDGSSVGEITDAELKDRRILAEEGFISVFAVVDSSSGAVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ G+ + + ++ V + + D L++ + + Sbjct: 491 AGPQVHARGLA----ESDAVLAEIIPEVTRALAEAAAGGVADTHQLQQVMRRVVGRWASN 546 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 547 RLRRRPMIIPVVVE 560 >gi|241204103|ref|YP_002975199.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857993|gb|ACS55660.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 556 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 321/555 (57%), Positives = 422/555 (76%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P Sbjct: 63 ASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTSGLLEAKRNFEKSKIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGD ++VG FSIE V VNHSIPE M+L+IR+PVGN++HTGDWK+D + LG +TD+ Sbjct: 123 TPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPVGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I++NA+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIENAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV+VA D+G+++ + F+S++ +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVNVAQDIGLMEGVKPFISEDEYGYIPRDKVVVILTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+LSR EMRNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 303 SQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD- 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP N+L+RMY+W RP+++V +HGE HL AHKELA Q GIA VP VRNG Sbjct: 362 TEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGIALVPRVRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +LRL P P+E+I E HG KDG LIG F ++GI +R++LS+VGH++VNV+LD Y+I Sbjct: 422 ILRLAPGPVEVIGEAPHGRIYKDGTLIGDFDEMGIGERKKLSYVGHVAVNVVLDARYDIV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P+++ IG+P YD +G + L ++ + +P+ RRKD+ +L+E++ A+RS Sbjct: 482 GEPDLISIGLPTYDDEGEDMEDTLFDAAVSAIESIPRARRKDIDMLQEAVRRAIRSAANN 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPLVT F+ K+ Sbjct: 542 TWGKKPLVTAFVTKV 556 >gi|229093544|ref|ZP_04224646.1| Ribonuclease J 1 [Bacillus cereus Rock3-42] gi|228689874|gb|EEL43679.1| Ribonuclease J 1 [Bacillus cereus Rock3-42] Length = 555 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 159/560 (28%), Positives = 284/560 (50%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ + LGG+GEIG NM + Y + ++ID G FP+ +L G+D V PD T+ Sbjct: 4 LQSGKTKIFALGGLGEIGKNMYVVEY----KDEILIIDSGFKFPETELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +FITH HEDH G + L+ + VP+YA A L+++K + Sbjct: 60 LERNKDKIKGLFITHGHEDHIGGVPFLFKRIQVPIYAGKLAAALIKSKFEEHNIHHVEIR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V+ + R HSIP+ +V+ +P GN+VHTGD+K D + + + Sbjct: 120 NILDETE-VEFQHTKVRFYRTTHSIPDAFGIVVTTPNGNVVHTGDFKFDFTPVGTE-ANL 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ G +SEK + +++ +I A+G +L TF+S+V R+ Sbjct: 178 HKIAEIGKEGVLCLLSDSTNSEVPGFSMSEKKVGQSVKEIFSGAQGRILFATFASNVHRL 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + RK++++G S+++ + + D G I+ +F+ P Q+ +I T Sbjct: 238 QQVVEASILYNRKVIVVGRSMEKTIQIGRDFGYIQAPKDIFVGVHEINHIPSHQVTIICT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +++ DTV+ SS IPGN +++ N+L G VI Sbjct: 298 GSQGEPMAALSRIAYNNHRQIQIIPGDTVVLSSSPIPGNVLSVNRTINQLYRVGANVIHH 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M ++P+ + IHGE L H ELA++ G+ + Sbjct: 358 KI-SDIHTSGHGAQEEQKLMLSLLKPKYFMPIHGEYRMLKKHVELAVECGVPLENCFVMD 416 Query: 418 NGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++L + I + + DG IG ++ + RR LS G + +++ LD Sbjct: 417 NGQVLEISKGEARISSKTIPSQAVYVDGSGIGDIGNIVLRDRRILSEEGIIIISLNLDCK 476 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P IV G Y ++ K + V + +L + +++++ L Sbjct: 477 QKRLVSQPAIVTRGF-VYMRGSEELMKKIEDIVEDCICNLLNEGIINWAQIKQTLVEVLS 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L G++P++ I ++ Sbjct: 536 PFLYSKTGRRPMLLPIIMEV 555 >gi|197105251|ref|YP_002130628.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] gi|196478671|gb|ACG78199.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] Length = 560 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 207/554 (37%), Positives = 325/554 (58%), Gaps = 1/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +ELVFLPLGG EIGMN LYG+G RKWI++D GV+F PGV+++ PD FI Sbjct: 7 TDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEVILPDPEFIE 66 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ I +THAHEDH GA+ LW L P+YA+PF +L K + + Sbjct: 67 EYADRILGIVLTHAHEDHIGAVAWLWPRLKAPIYATPFTAFVLREKLREADLLEAAQITE 126 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G +++G F +E + + HSIPE L IR+P+G I+HTGDWK+D D +LG TD+D+ Sbjct: 127 VPLGGTIELGPFKLELITLTHSIPEPNGLAIRTPLGTILHTGDWKIDPDPLLGGPTDEDA 186 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G+EG+LA++CDSTN +G SE ++ + ++ KG V V F+S+V+R+ S Sbjct: 187 IRRLGDEGVLAMVCDSTNVFVDGHAGSEAEVRAALIPLIGGLKGKVAVACFASNVARMDS 246 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + A+ GR++ L+G S+ R+ S A VG+++ F+++ +P +++ + TGSQ Sbjct: 247 VARAAQAAGRRVCLVGRSMIRMASAAKSVGLMQDLPPFVTEAEANHHPANEILYLCTGSQ 306 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+ALA+++ G +V L E D IFSSR IPGNE+ I +++N L ++GVR+ E Sbjct: 307 GEPRAALARIADGTHPHVSLGEGDHCIFSSRVIPGNEIPIRNLQNNLADRGVRLYTERDH 366 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +HVSGHP ++L MY+W RPQV V HGE HL+ H A + RNG M+ Sbjct: 367 PGIHVSGHPCRDELAEMYRWARPQVAVPTHGERRHLLEHAAFARDLQVPQQVTPRNGDMV 426 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P EI+DEV G D ++ + +RR S+ G ++V+V+LD I Sbjct: 427 RLAPGRAEIVDEVPSGRIYVDAGVLTPENGPSLRERRHASYNGVVAVSVVLDGRGRIASG 486 Query: 483 PEIVDIGIPAYDGD-GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++ +G+P + ++ + L + L +R+ + ++S A++ +++ Sbjct: 487 PQVRALGLPTDEDYPLDEVLEDLADEAKEALGRLKGEQRELDDEIETAMSRAVKKASQRI 546 Query: 542 WGKKPLVTVFINKI 555 WG++P+V + +I Sbjct: 547 WGRRPVVETTVLRI 560 >gi|260583924|ref|ZP_05851672.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] gi|260158550|gb|EEW93618.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] Length = 565 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 169/564 (29%), Positives = 281/564 (49%), Gaps = 13/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E GG+GEIG N YG + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAFGGLGEIGKNT----YGVQFQDELIILDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + +FI+H HEDH G + L +++P+YA+ A+ L+ K + + Sbjct: 61 IIQNQSKVKGLFISHGHEDHIGGIPFLIKQVNIPIYATKLAMSLIRNKLEEHGLLRDAIL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + R HSIP+ +VI++P GNIV TGD+K D + + Sbjct: 121 HEIDEDSVIKFRKTQVSFYRTTHSIPDAFGIVIKTPPGNIVFTGDYKFDFTPVG-QPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ G SE+ + ++I +I++ +G ++ TF+S+VSR+ Sbjct: 180 HKMAQIGEEGVLVLLGDSTNSEVPGFTKSEQVVGQSIKEIIQRVEGRIIFATFASNVSRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + D+A GRKI + G S++ + + ++G I D F+ YP E++I++ T Sbjct: 240 KQVTDVAVATGRKIAVFGRSMEASFATSRELGYISAPDDTFIDGRDINQYPAEEVIILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN A+ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGNHRQISVQPGDTVIFSSSPIPGNTAAVNRVINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE LA Q GI + Sbjct: 360 KLN-NIHTSGHGSQEEQKLMLRLMKPKYFMPVHGEYRMQKIQANLASQVGIPKENSFILS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L + D G DG IG ++ + R+ LS G + V +D + Sbjct: 419 NGDILAVTSDSARRAGHFYAGDVYVDGNGIGDIGNIVLRDRKTLSQDGLVIVVATVDYDE 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK--DLKLLRESISSAL 534 + PEI+ G Y + G++ + + + + + + LR I L Sbjct: 479 RELVTGPEILSRGF-IYMRESGELLNQAQQILKEELQAFINEADEPLNERSLRNLIIDTL 537 Query: 535 RSLLKKVWGKKPLVTVFINKISRQ 558 L K ++P++ + +S + Sbjct: 538 NPYLYKQTARRPMILPVLMGVSAE 561 >gi|311898702|dbj|BAJ31110.1| hypothetical protein KSE_53350 [Kitasatospora setae KM-6054] Length = 561 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 293/560 (52%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K L PLGG+GEIG NM + YG + +++DCGV FP+D+ PGVDL+ PD ++ Sbjct: 14 LKEGALRITPLGGLGEIGRNMTVLEYG----DRILIVDCGVLFPEDEQPGVDLILPDFSY 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + I +TH HEDH GA+ L +P+ S + L+EAK R+ + Sbjct: 70 IRDRLDKVDGIILTHGHEDHIGAVPYLLRENPDIPLIGSKLTLALIEAKLAEHRIHPYVL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD+ +G F + + VNHSIP+ +A+ +R+P G +V TGD+K+D + G +TD Sbjct: 130 EVV--EGDRERIGPFDCQFIAVNHSIPDALAVAVRTPAGMVVATGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EG+ L+ DSTNA G E+ I + ++ NA ++V +F+S V R Sbjct: 188 LPAFAKLAEEGMDLLLVDSTNAEVPGFIPHERDISAALRNVFANADKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIA 298 I+ ++D A + RK+ +G S+ R + +A ++G +K L + ++ P +++++I Sbjct: 248 IQQVLDAAHEYKRKVAFVGRSMVRNMGIARELGYLKVPGNLLVDVKTLDDLPDKEVVLIC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ E DTV+ +S IPGNE A+ + N L G +V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVEGDTVVLASSLIPGNENAVYRVINGLTRWGAKVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L + +P+ L+ +HGE HL A +L + GI V Sbjct: 367 KG-NAKVHVSGHASAGELLYFFNICKPKNLMPVHGEWRHLRAAADLGIATGIPRNRVVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G + L I+ +V G DG +G + + RR L G +SV V++D+ Sbjct: 426 EDGVCVDLEKGVARIVGKVRAGYVYVDGSSVGDITEASLKDRRILGEEGFISVFVVVDST 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I P I G DG G + L + + +++ +++ + + Sbjct: 486 NGKIVSGPTIQARGSGIDDGAFGAVAAKLEE----ALTRSAGEGVLEVRQIQQLVRRIIG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVADNYRRRPMILPVVVEV 561 >gi|170742526|ref|YP_001771181.1| beta-lactamase domain-containing protein [Methylobacterium sp. 4-46] gi|168196800|gb|ACA18747.1| beta-lactamase domain protein [Methylobacterium sp. 4-46] Length = 557 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 257/555 (46%), Positives = 366/555 (65%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITF 60 K +ELVF+PLGGVGEIGMN ALYGYG P+SRKWIM+DCG+ F ++ +PGVDL++PD++F Sbjct: 4 KGDELVFVPLGGVGEIGMNAALYGYGPPNSRKWIMVDCGMGFASEEHMPGVDLMYPDLSF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K+R+NL+ I ITH HEDH GAL +LW L VPVYA+ F L+E +R+ E + KI Sbjct: 64 IEKQRENLLGILITHGHEDHIGALVELWPRLKVPVYATRFTKSLIETRRLSEPGAPKIDL 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q ++ G F IE + V HSIPE AL IR+ G ++HTGDWKLDD + G+VT + Sbjct: 124 REIQVHERHRFGPFEIEYIPVAHSIPEANALAIRTAQGLVLHTGDWKLDDGPVAGNVTSE 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ +G EG+LAL+CDSTN REG SE + + ++++NA V VTTF+S+V+RI Sbjct: 184 EAFTQLGEEGVLALICDSTNVTREGRSPSETEVAAQLAELIRNAPHRVAVTTFASNVARI 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + A+ GR++V +G ++ RV+ VA + G + F E++G PRE+++ + TG Sbjct: 244 RAVAEAAKACGREVVAVGRAMDRVIDVARECGYLDGLDEFREPEAYGYLPREKIVALLTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA++SR E + L+ D VIFSSRAIPGNE +IG I N L++ GV VI + Sbjct: 304 SQGEPRAALARVSREEHPEIALSPGDRVIFSSRAIPGNERSIGAIINDLIDAGVEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++L MY+W +P++ V +HGEPLHL H A ++G+ V RNG Sbjct: 364 TE-LVHVSGHPRRDELAAMYRWTKPRIAVPVHGEPLHLAEHATFARKQGVEQVVKARNGT 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P EIID V G KDG ++ +D + +RR+LSF G +SV + +D H + Sbjct: 423 LIRLAPGEPEIIDHVTRGRLYKDGMVLIGESDRALPERRKLSFTGIISVALAVDQHGEMK 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I +G+P Y G I L+ + V T L + +R+D + + +I A+R+ + + Sbjct: 483 GEPAIDLMGLPTYGRKGEAIIDLVEEVVERTFDGLSRQKRRDSEAVENAIDRAIRAAVNE 542 Query: 541 VWGKKPLVTVFINKI 555 VWGKKP V + +I Sbjct: 543 VWGKKPACHVQVVEI 557 >gi|256832265|ref|YP_003160992.1| beta-lactamase domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685796|gb|ACV08689.1| beta-lactamase domain protein [Jonesia denitrificans DSM 20603] Length = 561 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 171/559 (30%), Positives = 297/559 (53%), Gaps = 17/559 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L + LGG+GEIG NMA+ YG + ++IDCGV FP+D PGVDL+ PD ++ Sbjct: 14 LADGTLRIVALGGLGEIGRNMAVLEYG----GRLLIIDCGVLFPEDHQPGVDLILPDFSY 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ AI +TH HEDH G + L VP+ S + +EAK R++ Sbjct: 70 IADRMDDVDAIVLTHGHEDHIGGVPYLLRLRRDVPIIGSKLTLAFIEAKLKEHRITPTT- 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + G+K+ G F +E V VNHSIP+ +A+ + +P G ++HTGD+K+D + G +TD Sbjct: 129 -IEVKEGEKLSRGIFDLEFVAVNHSIPDALAVAVSTPAGRVLHTGDFKMDQLPLDGRITD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA G E+ I + D+ ++G V+V +F+S V R Sbjct: 188 LRAFARLGEEGVDLFMVDSTNAEVPGFVTPEREIGPVLSDVFSRSEGRVVVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GR +V +G S+ R + +A D+G +K D + + ++ P +++ + Sbjct: 248 VQQVLDAAHEHGRHVVFVGRSMVRNMGIAADLGYLKVPDGVLVDLKAVDHLPDNRVVFMC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ R + + + DTVI +S IPGNE + + N L+ G +V+ Sbjct: 308 TGSQGEPMAALSRIANQSHR-IAVGQGDTVILASSMIPGNESQVYRVINGLMRLGAKVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 VHVSGH +L Y +RP+ ++ +HGE HL+A+ +A++ G+ V Sbjct: 367 SG-NAKVHVSGHSSEGELTYCYNILRPRNVMPVHGEVRHLIANGAIAVKTGVPPKNVILA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L I+ V G DG +G+ + + R+ LS G +S+ ++D + Sbjct: 426 EDGVVVDLVDGQATIVGAVPCGYVYVDGSSVGEITEAELKDRKILSEEGFISLFAVVDAS 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + G P+I+ G + + + V+ + + D L++ + + Sbjct: 486 TGKVVGGPQILARGFA----EEDSVFDDIRPQVVAALEESAASGNADTHQLQQVMRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINK 554 + +KP++ + + Sbjct: 542 RWVATKLRRKPMIIPVVVE 560 >gi|163850502|ref|YP_001638545.1| beta-lactamase domain-containing protein [Methylobacterium extorquens PA1] gi|240137567|ref|YP_002962038.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens AM1] gi|254560038|ref|YP_003067133.1| hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens DM4] gi|163662107|gb|ABY29474.1| beta-lactamase domain protein [Methylobacterium extorquens PA1] gi|240007535|gb|ACS38761.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens AM1] gi|254267316|emb|CAX23148.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens DM4] Length = 557 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 244/555 (43%), Positives = 358/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITF 60 + +ELVF+PLGGVGEIGMN LYG G RKWIM+DCG+ F ++ LPG+DL+FPD+TF Sbjct: 4 RQDELVFVPLGGVGEIGMNAGLYGIGPEKQRKWIMVDCGMGFAGEEGLPGIDLMFPDLTF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+AIFITHAHEDH GA+ +LW + PVYA+ FA LLE +R+ E + K+ Sbjct: 64 IEERKKDLLAIFITHAHEDHIGAISELWPRIKAPVYATRFAKNLLETRRLSEPGAPKVDL 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G +V VG F IE V V HSIPE+ A+ IR+ G ++HTGDWKLDD + GD T Sbjct: 124 REIKPGRRVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDSTSP 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ A+G+EGILAL+CDSTN +REG SE + ++ +++NA V VTTF+S+V+RI Sbjct: 184 EAFTALGDEGILALICDSTNVLREGRSPSESEVSATLHKLIENAPHRVAVTTFASNVARI 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + A+ GR+++ +G ++ RV+ VA + G + FLS ES+ PR++++ + TG Sbjct: 244 RAVAEAAQACGRQVIAVGRAMDRVIDVARECGYLDGLPDFLSAESYSHIPRDKVVCLLTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+A++++SR + + L D VIFSSRAIPGNE +G I N L+E G+ VI + Sbjct: 304 SQGEPRAAMSRVSRHDHPAISLTAGDRVIFSSRAIPGNERDVGSIINDLIEDGIEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY W RP+ +V +HGE LHL H A +G+ V RNG Sbjct: 364 TE-LVHVSGHPRREEMVTMYSWTRPKAVVPVHGEALHLDEHARFARSQGVESVVKARNGA 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P E+++ V G KDG ++ D I +RR+LS G +SV + +D + Sbjct: 423 VVRLAPGKPEVVEHVRAGRLYKDGNVLIDSKDRAIPERRKLSQTGIVSVAIAIDERGEVI 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + +G+P G + ++ TV T+ LP+ + KD + + ++ A+RS + + Sbjct: 483 GDPAVDIMGLPNRGRTGEPLLDTVVDTVNRTLNGLPRGKMKDSEAVENAVDRAVRSAVNE 542 Query: 541 VWGKKPLVTVFINKI 555 WGKKP V + ++ Sbjct: 543 AWGKKPACHVQVVEV 557 >gi|239982662|ref|ZP_04705186.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces albus J1074] gi|291454503|ref|ZP_06593893.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357452|gb|EFE84354.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 561 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 289/555 (52%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ Y + +++DCGV FP+++ PGVDL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEY----DGRLLIVDCGVLFPEEEQPGVDLILPDFTSIRNRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ ++ Sbjct: 75 DDIEGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVAED 134 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + VG F + + VNHSIP+ +A+ IR+P G VHTGD+K+D + +TD + Sbjct: 135 HRE--RVGPFDCQFIAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPMDRRLTDLPTFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + ++ NA ++V +F+S V RI+ I+ Sbjct: 193 KLGEEGIDLLLTDSTNAEVPGFVPPERDISNVLRNVFANADKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKALDDLPDDEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL + G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGVLTGVPPQNIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I+ +V G DG +G + + RR L G +SV V++D+ I Sbjct: 431 VDLVDGRAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFVVVDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D + + + + + Q + L++ + L + Sbjct: 491 GGPHIQARGSGIDDARFADVVPRIQEVLEKS----AQDGVVEPHQLQQLVRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 HYRRRPMILPVVVEV 561 >gi|114569921|ref|YP_756601.1| beta-lactamase domain-containing protein [Maricaulis maris MCS10] gi|114340383|gb|ABI65663.1| beta-lactamase domain protein [Maricaulis maris MCS10] Length = 556 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 208/556 (37%), Positives = 329/556 (59%), Gaps = 4/556 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L FLPLGG EIGMN+ LYGYG +KWI++DCGV+F PGVDL+ PD FI Sbjct: 2 TDSLYFLPLGGSDEIGMNLNLYGYGPEGKQKWIIVDCGVTFGDLTTPGVDLIMPDPRFIE 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + R +L+ + +THAHEDH GA+ LW L P++A+PF L+ + + ++ Sbjct: 62 ERRDDLIGMVLTHAHEDHMGAVAHLWRRLRCPIWATPFTAWLVRDRLREYGLLDEVELHE 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + D+G F+++ V + HSIPE + IR+P G ++HTGDWK+D ++G+ TD D+ Sbjct: 122 MALDCRFDLGPFNLQLVTLTHSIPEPNGIAIRTPAGMVLHTGDWKIDPAPMIGEATDIDA 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIR 241 L AIGNEG+LA++CDSTN G SE +++ + ++ K G V + +F+S+V+R++ Sbjct: 182 LTAIGNEGVLAMVCDSTNVFSPGESGSEGDVREELIKVVGECKTGKVAIASFASNVARLQ 241 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S I+ AE GR++ L+G S+ R+ + A VG++K + F+S+E +P +++ + TGS Sbjct: 242 SSIEAAEANGRRVCLVGRSMHRMTAAAKAVGMLKHVKDFVSEEEASSFPASKILYLCTGS 301 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+AL++++ G RNV L+ DTVIFSSR IPGNE+ I ++N+L E+GV +I E Sbjct: 302 QGEPRAALSRIAAGNHRNVSLSRDDTVIFSSRVIPGNELGIFELQNQLAERGVHIITEKT 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+HVSGHP ++L +MY W +P V + +HGE HL+ H + A + + VRNG M Sbjct: 362 R-PIHVSGHPCRDELAQMYAWAKPSVAIPVHGERRHLLEHADFARELQVPHSVSVRNGDM 420 Query: 422 LRL-FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +++ I+DE DG I + +RR+L+ G +++++ + I Sbjct: 421 VQIRSDGTASIVDEAPASRLHVDGNFIVDADAASMRERRKLAHAGQVTLSMAVSEKGEIV 480 Query: 481 GVPEIVDIGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PE+ G+P D + L + R+D++ E + A+R Sbjct: 481 SGPEVRLQGVPEDDNMSLDDFADAMADEAERAFDRLSKRDRRDVERAEEEVRRAVRREAN 540 Query: 540 KVWGKKPLVTVFINKI 555 ++WGKKP V + + ++ Sbjct: 541 RIWGKKPWVEIMMLEV 556 >gi|293376280|ref|ZP_06622521.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325842140|ref|ZP_08167605.1| ribonuclease J 1 [Turicibacter sp. HGF1] gi|292645098|gb|EFF63167.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325489706|gb|EGC92064.1| ribonuclease J 1 [Turicibacter sp. HGF1] Length = 564 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 277/560 (49%), Gaps = 10/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K ++ LGG+GEIG NM Y + +ID G+ FP+D L GVD V PD + Sbjct: 10 IKPNDVAVFALGGLGEIGKNMYCVQY----RDEICIIDAGIKFPEDYLLGVDYVIPDYQY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 +++ + ++ +FITH HEDH G + L L +P +YA AIGL++ K ++ ++ Sbjct: 66 LIENQDKIVGLFITHGHEDHIGGIPFLLRQLKIPKIYAGKLAIGLIKNKLEERKLLRQAN 125 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + F + + F+ E R NHSIP++ + I++P G IVHTGD+K D I + Sbjct: 126 IVEFNSDTVIKSKHFTFEFFRTNHSIPDSYGIAIKTPHGIIVHTGDFKFDFTPIGP-PAE 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+L L+ DSTN+ ISE+ + +++ DI K G +++ TF+S+V R Sbjct: 185 YAKMARLGEEGVLCLLSDSTNSELPIFTISERRVGESLGDIFKKIDGRIIIATFASNVHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I++ RKI + G S++ + + ++ G I + F+S P+ ++ ++ Sbjct: 245 VQQIVEACVATNRKIAIFGRSMEATIKIGLEYGYIHCPEDTFVSANEVKHLPQNEVTILC 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R +++ DTVIFSS IPGN +++G N L G VI Sbjct: 305 TGSQGEPLAALSRIANGTHRQIQIIPGDTVIFSSSPIPGNALSVGKTINALYRAGAEVIT 364 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH +LK M +RP+ + IHGE L H EL +Q G+ + Sbjct: 365 HSPLTDIHTSGHAGQEELKLMLNLMRPKYFLPIHGEYRMLSIHAELGVQCGVPEENCFVL 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG +L + + G D IG I R+ LS G + V V + Sbjct: 425 NNGDVLAFNQHGARVSGRIHSGTIYTDSSGIGDVGTEIIRDRKILSEDGLVIVAVSIKRA 484 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P +V G I + + L + + L+ +IS + Sbjct: 485 EKRLLNGPNVVSRGFVYMKESEDLIKNTEIAVREIVLHKLQTSKHVSTEELKSAISDVVA 544 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L ++P++ I +I Sbjct: 545 PFLFSKTQRRPMILPIIMEI 564 >gi|260462247|ref|ZP_05810491.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032107|gb|EEW33374.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 556 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 289/553 (52%), Positives = 383/553 (69%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N ELVF+PLGGVGEIGMN ALYGYG PS+R+WI+ID GV+FP PGVDL+ PD FI Sbjct: 5 ENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIIIDVGVTFPDAAHPGVDLILPDTRFI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + NL I ITHAHEDHYGAL D W L PV+ +PF+ GLLEAKR E+ + KIP Sbjct: 65 EENLANLRGIIITHAHEDHYGALLDTWPKLKAPVWMTPFSAGLLEAKRQGEQGAPKIPLT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+K VG F IE++ V HSIPE M+L I SP G ++HTGDWK+D + +G TD+ Sbjct: 125 IYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPKTDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A G++G+LAL+CDSTNA+REG SE + + + +++ AKG V VTTFSS+V RI Sbjct: 185 RFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTTFSSNVGRIV 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI A GR+ ++LG SLKRV+ VA ++G + F+++E FG PRE L++I TGS Sbjct: 245 SIARAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVIICTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+LSR EM++V L DTV+FSSR IPGNE AI IKNRL++ G+++I ED Sbjct: 305 QGEPLAALAKLSRDEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGIKII-EDG 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L++MY+W+RPQ+ V +HGE HLVA L GI V VR+G M Sbjct: 364 DALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P IID+V G KDG LIG +GI RR+LSF GH++VNV+LD+ Y + G Sbjct: 424 LRLAPGPATIIDQVPFGRIYKDGNLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYELAG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+ D G + L++ + V +P+ RRKDL L++E++ A+R + Sbjct: 484 DPDLVAIGVAEADARGETLEDLMIDAAVGAVDSIPRQRRKDLDLVQEAVRRAVRGAANEA 543 Query: 542 WGKKPLVTVFINK 554 WGKKPLVTVF+ + Sbjct: 544 WGKKPLVTVFVTR 556 >gi|118578825|ref|YP_900075.1| beta-lactamase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501535|gb|ABK98017.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379] Length = 569 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 185/558 (33%), Positives = 303/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L +PLGG+GEIG+NM Y G +++DCG+ FP+ D+ G+D V PDI ++ Sbjct: 18 NTDPLRIIPLGGLGEIGLNMMAYECG----GDILIVDCGLMFPEPDMLGIDYVIPDIGWL 73 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + I +TH HEDH GAL + L+VP++ + +G + K ++ + + Sbjct: 74 RERAGRVRGICLTHGHEDHIGALPFVLQELNVPLFGTALTLGFVNEKLREYKLDDLVELV 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + VD+G F +E +RV HS+ + AL I +P G ++HTGD+K+D + G +TD Sbjct: 134 TVRPRQSVDLGCFRVEFLRVAHSVVDGCALAITTPEGVVIHTGDFKIDQTPVDGQLTDLA 193 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 SL G+LAL+ DSTN REG +SEK + + +I G ++V FSSS+ R++ Sbjct: 194 SLSRYAEAGVLALLSDSTNVEREGFTLSEKYVGEAFAEIFPKCPGRIIVAAFSSSIHRVQ 253 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 ++D+A GRKI+L G S+ V +A +G + D + + G EQ+ +I+TG Sbjct: 254 QVVDVAVAHGRKILLNGRSMIANVRIARQLGYLTISDSDLMDLKELGHLSPEQVCIISTG 313 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ + + +KL + DTVI SSR IPGNE I + N L +G V E Sbjct: 314 SQGEPMSALTRIAMDDHKQIKLEKGDTVILSSRVIPGNERTISELINHLYRRGAEVFHEK 373 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK M +RP+ + IHGE HLV H +LA + GI N Sbjct: 374 V-SEVHVSGHASQEELKLMLNTVRPRFFIPIHGEYRHLVKHIQLARKVGIPEERCILATN 432 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + D I++++ G DG +G ++ + R+ LS G + V + ++ + Sbjct: 433 GDVVAFYADTAAIVEKIDSGRVFVDGKGVGDVGNVVLKDRKHLSEDGMVVVIIGINQSSG 492 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+IV G ++ + + V+ + +L R D + +++++ ALR Sbjct: 493 ALIYGPDIVSRGF-VFEDESQDYLETSRAVVLEALDELNDEMRCDSEEVKQAVRQALRRF 551 Query: 538 LKKVWGKKPLVTVFINKI 555 KK ++P++ I ++ Sbjct: 552 FKKSIERRPVILPVIMEM 569 >gi|86742224|ref|YP_482624.1| beta-lactamase-like protein [Frankia sp. CcI3] gi|86569086|gb|ABD12895.1| beta-lactamase-like [Frankia sp. CcI3] Length = 561 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 284/557 (50%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGGVGEIG NM ++ + + +++DCGV FP+D PG+DL+ PD T I Sbjct: 17 DGLRIIPLGGVGEIGRNMTVFEHA----GRLLIVDCGVLFPEDVQPGIDLILPDFTAIRD 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ A+ +THAHEDH GA+ L +P+ + + L+ AK RV K Sbjct: 73 RLDDIEAVILTHAHEDHIGAVPYLLRERRDIPLIGTRLTLALMNAKLAEHRV--KAVTQE 130 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G F E VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 131 IREEERHAFGPFECEFFAVNHSIPDAVAVAIRTEAGLVLHTGDFKMDQLPLDGRLTDLGG 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ L+ DSTNA G SE+ I + + + A +++ F+S V R++ Sbjct: 191 FARLGREGVDLLLSDSTNAEVPGFVTSEREIAPVLDGVFREATRRIIIACFASHVHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D AE+ GR + +G S+ R + VA D+G+++ L + P + +I+TGS Sbjct: 251 VLDAAEEHGRSVCFVGRSMVRNMGVARDLGLLRVPPGLIVDARDVDALPDRNICLISTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL++++ + +++ DTV+ +S IPGNE A+ + N L G +V+ + Sbjct: 311 QGEPLSALSRMANRDH-QIRIQAGDTVVLASSLIPGNENAVFRVINGLTRYGAKVVHKGV 369 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VH SGH +L + RP ++ +HGE HL AH +LA G+ V +G Sbjct: 370 -AKVHTSGHAPAGELLYVLNATRPSNVMPVHGEWRHLRAHAKLAEATGVPPDHVVLAEDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ L I V G DG +G + + RR L G +++ V++D Sbjct: 429 MVIDLLDGRARITGVVPCGYVYVDGAAVGDVGEPSLKDRRILGEEGFITITVVVDAAAGK 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G D + K V +VD + DL L++ + + + Sbjct: 489 VVVGPDLSARGFS----DAPGAFDSVSKLVSDGLVDAMRTGMNDLTALQQLVRRTVGRWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 545 NENYRRRPMIVPVVLEV 561 >gi|218529199|ref|YP_002420015.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|218521502|gb|ACK82087.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] Length = 557 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 244/555 (43%), Positives = 357/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITF 60 + +ELVF+PLGGVGEIGMN LYG G RKWIM+DCG+ F ++ LPG+DL+FPD+TF Sbjct: 4 RQDELVFVPLGGVGEIGMNAGLYGIGPEKQRKWIMVDCGMGFAGEEGLPGIDLMFPDLTF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+AIFITHAHEDH GA+ +LW + PVYA+ FA LLE +R+ E + K+ Sbjct: 64 IEERKKDLLAIFITHAHEDHIGAISELWPRIKAPVYATRFAKNLLETRRLSEPGAPKVDL 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G +V VG F IE V V HSIPE+ A+ IR+ G ++HTGDWKLDD + GD T Sbjct: 124 REIKPGRRVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDSTSP 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ A+G+EGILAL+CDSTN +REG SE + ++ +++NA V VTTF+S+V+RI Sbjct: 184 EAFTALGDEGILALICDSTNVLREGRSPSESEVSATLHKLIENAPHRVAVTTFASNVARI 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R + + A+ GR+++ +G ++ RV+ VA + G + FLS ES+ PR++++ + TG Sbjct: 244 RVVAEAAQACGRQVIAVGRAMDRVIDVARECGYLDGLPDFLSAESYSHIPRDKVVCLLTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+A++++SR + + L D VIFSSRAIPGNE +G I N L+E G+ VI + Sbjct: 304 SQGEPRAAMSRVSRHDHPAISLTAGDRVIFSSRAIPGNERDVGSIINDLIEDGIEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY W RP+ +V +HGE LHL H A +G+ V RNG Sbjct: 364 TE-LVHVSGHPRREEMVTMYSWTRPKAVVPVHGEALHLDEHARFARSQGVESVVKARNGA 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P E+++ V G KDG ++ D I +RR+LS G +SV + +D + Sbjct: 423 VVRLAPGKPEVVEHVRAGRLYKDGNVLIDSKDRAIPERRKLSQTGIVSVAIAIDERGEVI 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + +G+P G + ++ TV T+ LP+ + KD + + ++ A+RS + + Sbjct: 483 GDPAVDIMGLPNRGRTGEPLLDTVVDTVNRTLNGLPRGKMKDSEAVENAVDRAVRSAVNE 542 Query: 541 VWGKKPLVTVFINKI 555 WGKKP V + ++ Sbjct: 543 AWGKKPACHVQVVEV 557 >gi|239928575|ref|ZP_04685528.1| hypothetical protein SghaA1_10148 [Streptomyces ghanaensis ATCC 14672] gi|291436900|ref|ZP_06576290.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339795|gb|EFE66751.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 561 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD + + Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFSSVRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGQRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLADSTNAEVPGFVPPERDISNVLRQVFAGARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAYEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ E DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVEGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I +V G DG +G + + R+ L G +SV V++D+ I Sbjct: 431 VDLVEGKAKIAGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFVVIDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G D G + + + + + Q + L++ I L + Sbjct: 491 GGPHVQARGSGIEDSAFGGVIPKITEVLERS----AQDGVVEPHQLQQLIRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|297191689|ref|ZP_06909087.1| metallo-beta-lactamase family hydrolase [Streptomyces pristinaespiralis ATCC 25486] gi|197721455|gb|EDY65363.1| metallo-beta-lactamase family hydrolase [Streptomyces pristinaespiralis ATCC 25486] Length = 561 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 165/555 (29%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTTIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ ++ Sbjct: 75 DDIDGIVLTHGHEDHIGGVPFLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVTEG 134 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +++ G F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + G +TD + Sbjct: 135 HRERI--GPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G ++ L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDHEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I+ +V G DG +G + + RR L G +SV +++D+ + Sbjct: 431 VDLVDGKATIVGKVQAGYVYVDGLSVGDVTEPALKDRRILGEEGIISVFLVVDSTTGKVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G G + ++ + + + L++ + + + Sbjct: 491 GGPNIHARG----SGIEDSMFAAVMPKIEDAIAKAASDGVAEPHQLQQLVRRTVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|116334016|ref|YP_795543.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus brevis ATCC 367] gi|116099363|gb|ABJ64512.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus brevis ATCC 367] Length = 559 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 173/556 (31%), Positives = 279/556 (50%), Gaps = 10/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V PD ++ Sbjct: 7 KNNETAIFGVGGLGEIGKNT----YGIQFQDEIILIDAGIKFPEDELLGIDYVIPDYQYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G + L L+VPVYA P A+ L++ K + K Sbjct: 63 VENQAKIKALVITHGHEDHIGGIPYLLKALNVPVYAGPLALALIKNKLEEHGLLKSTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + S+ R HSIP+T+ + + +PVG IV TGD+K D + D Sbjct: 123 AIDDDTVLKFRKMSVSFFRTTHSIPDTLGVAVHTPVGVIVETGDYKFDLTPVTNQPPDLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EGIL LM DSTNA R SEK + K+I I +G V+ TF+S++SRI Sbjct: 183 KMAKLGAEGILCLMSDSTNAERPIWTKSEKWVGKSIRKIFDQVEGRVIFATFASNISRIE 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GRKI + G S++ + ++G + D + + P +++++ TG Sbjct: 243 TACETALAHGRKIAVFGRSMEAAIVNGRELGYLNIPDDALVDANAIRSLPANKVMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTV+FSS IPGN +++ + N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQIAIQPGDTVVFSSNPIPGNTISVNRVINELEEAGANVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA Q G+ ++N Sbjct: 363 VN-NIHTSGHGGQEEQKLMLRLMQPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFILQN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D + G DG IG ++ + R+ LS G + V +D + Sbjct: 422 GDVLALTKDSARVAGHFTAGDVYIDGSGIGDIGNVVLRDRQLLSEEGLVVVVATIDLKNQ 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+++ G Y + G++ + V T+ + + +R ++ L++ Sbjct: 482 EIKAGPDLLSRGF-VYMRESGELLNEGRRRVFQTIRRAMRNPKATEASIRNAVIDDLQNF 540 Query: 538 LKKVWGKKPLVTVFIN 553 L + + P++ Sbjct: 541 LFEKTERHPMILPMFI 556 >gi|13471391|ref|NP_102957.1| hypothetical protein mll1350 [Mesorhizobium loti MAFF303099] gi|14022133|dbj|BAB48743.1| mll1350 [Mesorhizobium loti MAFF303099] Length = 556 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 287/553 (51%), Positives = 383/553 (69%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N ELVF+PLGGVGEIGMN ALYGYG PS+R+WI+ID GV+FP PGVDL+ PD FI Sbjct: 5 ENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIVIDVGVTFPDAAHPGVDLILPDTRFI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + NL I ITHAHEDHYGAL D W L PV+ +PF+ GLLEAKR E+ + KIP Sbjct: 65 EENLANLRGIIITHAHEDHYGALLDTWPKLKAPVWMTPFSAGLLEAKRQGEQGAPKIPLT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+K VG F IE++ V HSIPE M+L I +P G ++HTGDWK+D + +G TD+ Sbjct: 125 IYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITTPAGTVIHTGDWKIDPEPTIGPKTDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A G++G+LAL+CDSTNA+REG SE + + + ++++A G V VTTFSS+V RI Sbjct: 185 RFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQSAVGRVAVTTFSSNVGRIV 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI A GR+ ++LG SLKRV+ VA ++G + F+++E FG PRE L++I TGS Sbjct: 245 SIAKAARDAGRQCLVLGRSLKRVIDVADELGYMDGLPEFIAEEDFGFIPRENLVIICTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+LSR EM++V L DTV+FSSR IPGNE AI IKNRL++ G+++I ED Sbjct: 305 QGEPLAALAKLSRDEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGIKII-EDG 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L++MY+W+RPQ+ V +HGE HLVA L GI V VR+G M Sbjct: 364 DALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P IID+V G KDG LIG +GI RR+LSF GH++VNV+LD+ Y + G Sbjct: 424 LRLAPGPATIIDQVPFGRIYKDGNLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYELAG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V IG+ D G + L++ + V +P+ RRKDL L++E++ A+R + Sbjct: 484 DPDLVAIGVAEADASGETLEDLMIDAAVGAVDSIPRQRRKDLDLVQEAVRRAVRGAANEA 543 Query: 542 WGKKPLVTVFINK 554 WGKKPLVTVF+ + Sbjct: 544 WGKKPLVTVFVTR 556 >gi|90417828|ref|ZP_01225740.1| metallo-beta-lactamase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90337500|gb|EAS51151.1| metallo-beta-lactamase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 552 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 276/551 (50%), Positives = 372/551 (67%), Gaps = 1/551 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L+F+PLGG+GEIGMN+ALYGYG +R+WI +D G+SF D PGVDLVFPDI FI + Sbjct: 2 NQLLFVPLGGIGEIGMNLALYGYGPEHAREWIAVDVGISFAGADFPGVDLVFPDIRFIEE 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L I ITHAHEDHYGAL DLW + VPVYA+ F +L AKR E + KIP F Sbjct: 62 LGDKLKGIVITHAHEDHYGALLDLWPKMKVPVYATAFTAAMLAAKREGEPGAPKIPVTQF 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AGD+ VG F IE++ V HSIPE +AL IRSP G +VHTGDWK+D LG TD+ L Sbjct: 122 SAGDRFKVGPFEIEAINVTHSIPEPVALAIRSPAGTVVHTGDWKIDPTPALGAPTDEKRL 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG+EG+LA++CDSTNA+REG SE + ++ +I++ AKG V VTTFSS+V RIRSI Sbjct: 182 REIGDEGVLAMICDSTNALREGVSPSESEVSASLGEIIRGAKGRVAVTTFSSNVGRIRSI 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A GR+++L+G S++RVV V+ ++G + FL ++ FG P E+ ++I TGSQG Sbjct: 242 AAAARDAGRQVLLMGRSMRRVVDVSTELGYMDGIPPFLGEQDFGYIPPEKAVIILTGSQG 301 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+ALA+LSR E V L++ D VIFSSRAIPGNE I IKN L+E+GV+++ ED E Sbjct: 302 ETRAALARLSRDEHPTVALSQGDLVIFSSRAIPGNEKLIIDIKNALIERGVQIL-EDGEK 360 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP +++++MY+W+RP + V HGE HL AH +LA + G+ V P RNGKM++ Sbjct: 361 LVHVSGHPRRSEMRQMYEWVRPTIAVPAHGEAAHLSAHAKLARELGVKQVVPARNGKMVQ 420 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P +I +V G KDG LIG +G+ +RR+LSFVGH+SV V LD + P Sbjct: 421 LSPGAASVIADVPVGRLFKDGRLIGTAEAMGVNERRRLSFVGHVSVLVELDAKLELREDP 480 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 ++V +G+P D G ++ ++L+ V +P RRKDL + E++ A+R + WG Sbjct: 481 DVVALGLPEDDAAGDEMEEILIDAAAGAVESIPLKRRKDLDKVSEAVRRAVRGAAFEAWG 540 Query: 544 KKPLVTVFINK 554 KKP+ TVF+ + Sbjct: 541 KKPIATVFVTR 551 >gi|229085995|ref|ZP_04218217.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] gi|228697306|gb|EEL50069.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] Length = 556 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + LGG+ EIG NM Y S ++IDCG FP + L G+DL+ PDI +++ Sbjct: 5 ENAVSIFALGGLNEIGKNMYAIEY----SNDIVIIDCGNKFPDESLLGIDLIIPDIAYLV 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + A+ +TH HEDH G + L+VPVYA+ F +GL+E K ++ + I Sbjct: 61 ENKDKVKALIVTHGHEDHIGGIPFFLKKLNVPVYATRFTLGLIEIKLKEHKLLGESELIE 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + +G S+ +V HSIP+ + +V +P GNIVHTGD+K D + +D Sbjct: 121 INSNSNLTIGGISVSFFKVTHSIPDCLGIVFHTPEGNIVHTGDFKFDLTPANNENSDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+L L+ +STNA R G SE+ + +++ + A+ V+V+TF+S++SR++ Sbjct: 181 MAEIGKDGVLLLLSESTNAERPGLTPSEQMVGEHVEAVFMKAECKVIVSTFASNISRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A++ RK+ LLG S+ VV+VA++ G + + + E++ ++ TGS Sbjct: 241 VVNAAQKTNRKLALLGRSMVNVVAVAMERGYLTVPYGMLIDPHEINEMAPERVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED- 360 QGEP +ALA+LS G R V + +DTVIF++ IPGNE I I + L G +VI Sbjct: 301 QGEPLAALARLSTGNFRGVDILPEDTVIFAAGPIPGNERNITSIVDNLFALGAKVIYGSG 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + +HVSGH Y DLK M ++P+ + IHGE L H+ L G+ + N Sbjct: 361 STSGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEFRMLHHHRLLGESVGVEQGNTFIINN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + ++ G DG + ++ + R+QL+ G L + + + Sbjct: 421 GDVVDIEHTIARQTRKIPVGNTYVDGGDVDNIGEIVLRDRKQLAEDGMLMIVLTMSKSEG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+ + G D D ++ + + + I T+ +L + R ++++ I ++R Sbjct: 481 KLISEPDTISRGFV--DRDFSELRRDVNRLTIKTINELQEANRNQWNVMKKQIKKSIRQY 538 Query: 538 LKKVWGKKPLVTVFINKI 555 + KKP++ + +I Sbjct: 539 VYTHTKKKPMIVPILIEI 556 >gi|302558052|ref|ZP_07310394.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] gi|302475670|gb|EFL38763.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] Length = 561 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + VG F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGQRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFAGARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVDGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I +V G DG +G + + R+ L G +SV V++D+ I Sbjct: 431 VDLIEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFVVIDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G D G++ + + T+ Q + +++ + L + Sbjct: 491 GGPHVQARGSGIEDSAFGEVIPKITE----TLERSAQDGVVEPHQMQQLVRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|159036987|ref|YP_001536240.1| beta-lactamase domain-containing protein [Salinispora arenicola CNS-205] gi|157915822|gb|ABV97249.1| beta-lactamase domain protein [Salinispora arenicola CNS-205] Length = 562 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 292/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+G IG NM ++ Y K +++DCGV FP + PGVDL+ PD I+ Sbjct: 19 LRIIPLGGLGAIGRNMTVFEY----DGKLLVVDCGVLFPDVEQPGVDLILPDFAPILDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK R+ + + Sbjct: 75 DDVQAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSEFTLALVEAKLAERRIQPYTLTV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD Sbjct: 133 EGGREQLGPFECEFFAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDGRITDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA G E+ I + I A+G ++V +F+S V R++ + Sbjct: 193 RLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKARGRIIVASFASHVHRVQQVF 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G++ L + + P +Q+++++TGSQG Sbjct: 253 DSAVEHGRKVALIGRSMVRNMGIARDLGLLNIPPGLVVGLDEATSMPPDQIVLMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ +A DTV+ +S +PGNE ++ + NRL G V+ +D Sbjct: 313 EPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLARAGAVVVHKDV-A 371 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L + +RP L+ +HGE HL AH L ++ G+A V +G + Sbjct: 372 KVHVSGHAPAGELLYLLNMVRPSNLMPVHGEWRHLRAHARLGIESGVASDRVVLCEDGDV 431 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V DG +G ++ + +RR L G ++ V++D+ + Sbjct: 432 VDLVEGRASLVGRVRSRYVYVDGLAVGDVSESLLTERRILGDGGFIAATVVVDSVTGKVV 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G + L+ + + D D L++ + + + Sbjct: 492 GGPTVSAKGFSEDPEAFSPVVPLITEALNRAASD----GITDPHQLQQIVRRTVGRWVND 547 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 AYRRRPMIVPNVVEV 562 >gi|116623576|ref|YP_825732.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226738|gb|ABJ85447.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 556 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 176/561 (31%), Positives = 289/561 (51%), Gaps = 11/561 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + +L +PLGG+GE GMN YG I++DCG+ FP +L GVDLV PD+TF Sbjct: 1 MTDLKLQVIPLGGLGEFGMNSTAIRYG----EDIIVVDCGMMFPDAELLGVDLVMPDLTF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + A+ +TH HEDH GA+ + S + VPVY +PF + L+E + + K+ Sbjct: 57 LKENQSQVRALILTHGHEDHIGAVPYMLSEIDVPVYGTPFTLSLVERRMEEYDLEKEPRL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + + VG F IE + V HSI +AL I +P+G I+HTGD+K+D ++ D Sbjct: 117 IKVKPKQAIAVGPFKIEFIHVTHSIVSAVALAITTPLGVIIHTGDFKVDPTPTDNELFDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G G+L L+ DSTNA R G SE+ +K + +I A+ ++V+ FSSS+ RI Sbjct: 177 HTLADYGKRGVLLLLSDSTNADRPGYTESERAVKPRMEEIFSRAEKRIVVSCFSSSIHRI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D+AE+ GR++ ++G S+ V +A G++ D + L + P ++ + + Sbjct: 237 QLVLDLAEEYGRRVAVIGRSMTSVTEIAHSHGLLSIPDGILLRPQDAMDLPAGKVAFLVS 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP SAL++++ ++V + DTV+ SSR IPGNE I + + + +G V+ Sbjct: 297 GTQGEPMSALSRVAVDNHKHVSVERGDTVVLSSRIIPGNEKGIFRMIDHMARRGADVMYG 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI---ACVPPV 416 P+HVSGH ++K + +RP+ + IHGE L H LA + Sbjct: 357 SMNPPLHVSGHGSIEEMKLVLNLVRPRFFMPIHGEFRQLSKHARLAEHLRFAGLEETFVM 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLDN 475 G +L V G D + ++ I RR LS G + + ++ Sbjct: 417 DTGDILEFDHHGARKAGRVTVGHVCIDSGSVDDVVQEMVIRDRRLLSEDGIVLAIIAINR 476 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 H + PEIV G +G + V T+ Q + D +++E + + L Sbjct: 477 HTGKLESPPEIVSRGFNV-GIEGSAFMETAKAIVAKTLESSSQEEKTDWGVMKEKVRADL 535 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + K ++PL+ I ++ Sbjct: 536 KRYIVKETSRRPLILPVIMEV 556 >gi|303238464|ref|ZP_07324998.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] gi|302593862|gb|EFL63576.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] Length = 552 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 184/547 (33%), Positives = 297/547 (54%), Gaps = 13/547 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L +PLGG+GEIG N+ ++ YG ++DCG +FP D++ G+DLV PD+T++ Sbjct: 4 SKKKLKVIPLGGLGEIGKNITVFEYG----DDIFVVDCGTAFPDDEMLGIDLVLPDVTYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + I ITH HEDH G L + ++VPV+ S A+GLLE K + K Sbjct: 60 IKNKDRVRGIIITHGHEDHIGGLPYVLKEVNVPVFGSRLALGLLEYKLEEHGILNKSKLQ 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +++G F IE +R HSI + MAL I SP G +VHT D+K+D I G+ D Sbjct: 120 PVKPGQTIELGVFKIEFIRTTHSIVDAMALAIHSPAGIVVHTSDFKVDYTPISGEPIDLP 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+L LMCDSTN R G +SE+ + + DI +NA +L+ TF+S+V RI+ Sbjct: 180 RFAELGQKGVLLLMCDSTNVERPGYTMSERTVGETFNDIFRNANSRILIATFASNVHRIQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++ A + RKI L G S+ V + A+++G + + + E Y RE++++I+TG Sbjct: 240 QIVNAAVKFERKIALCGRSMVNVCNKAMELGYLTIPEGTLIDIELTRNYNREKIVIISTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ GE R V++ D V+ S+ IPGNE +I + N L ++G +VI E Sbjct: 300 SQGEPMSALSRIAAGEHRQVEIVPGDLVVISATPIPGNEKSISGVVNDLFKKGAQVIYES 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH +LK +++ + PQ + +HGE HL H +LA + Sbjct: 360 L-AEVHVSGHACQEELKLIHRLVNPQFFMPVHGEYRHLKRHADLAHNLGMDEEKTLIMEI 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + D +I V G L DG IG ++ + R+ LS G + V + Sbjct: 419 GQVLEIDADNAKIKGSVPSGKILVDGLGIGDVGNIVLRDRKHLSEDGMIIAVVTIQKETG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 NI P+++ G Y + + + + + + + ++L + I +R Sbjct: 479 NILNGPDVLSRGF-VYGRESEEFMDDVKQV---CMDSMMKGGGRNLASKKNRIKETMRDY 534 Query: 538 LKKVWGK 544 + + + Sbjct: 535 IYQKTKR 541 >gi|261419479|ref|YP_003253161.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|319766295|ref|YP_004131796.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y412MC52] gi|261375936|gb|ACX78679.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|317111161|gb|ADU93653.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. Y412MC52] Length = 556 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 170/556 (30%), Positives = 280/556 (50%), Gaps = 12/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ LGGVGEIG NM + +ID GV FP+D++ G+D V PDIT++++ Sbjct: 9 EKIRIFALGGVGEIGKNMYVVE----LDEDIFVIDAGVMFPEDEMLGIDKVIPDITYLIE 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIF+TH HE+H GA+ + L VPVY + +GL EA + VS Sbjct: 65 RQHRIQAIFLTHGHEEHMGAIAYVLKQLSVPVYGTKLTLGLAEALLKEQGVSG-AKLNEV 123 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++ + R HSIP+++ + + + G IV+T D+K D + TD + Sbjct: 124 HPDEELVFDKAKVTFFRTIHSIPDSIGISLHTSQGAIVYTSDFKFDQTPYGNNRTDLGKM 183 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+L L+ DSTNA R G S+ + I D++ +AKG V V ++S+++RI+ + Sbjct: 184 AQIGEEGVLCLLSDSTNAERPGYSGSDTVVAYEIADVIGHAKGRVFVACYASNITRIQQV 243 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + A Q GRK+ ++G +L +V+ +A+ +G + D++ +S Y +L+++ TG Sbjct: 244 LYAAHQSGRKVAVIGKTLHKVMDIAVRLGYLHVPDKVTISAHDIDRYNDRELVILTTGGH 303 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL +++R + V + E DTVI ++ +PG E+ + L G VI + Sbjct: 304 GEPMSALWRMARQANKQVNIKEGDTVIVAASVMPGYELGFAKTIDALYRAGANVIY--RD 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M ++P+ + +HGE AH LA GI + G+ Sbjct: 362 RQVHVSGHGCQEELKLMLNLMKPKYFIPVHGEYRMQKAHARLAKAVGISEERTFLIDKGE 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ +V +G L DG IG ++ + RR LS G L V L+ I Sbjct: 422 VIEFRGGAARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIAVVTLNKEAKTI 481 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + + + K V + + + L+ +I AL L Sbjct: 482 AAGPEIISRGF-VYMRESETLLEEAEKMVAAIIERCLESYMLEWSSLKANIREALSQFLF 540 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 541 EKTKRRPMILPIIMEV 556 >gi|259046792|ref|ZP_05737193.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] gi|259036560|gb|EEW37815.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] Length = 565 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 277/559 (49%), Gaps = 13/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E GG+GEIG N YG + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAFGGLGEIGKNT----YGVQFQDELIILDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + +FI+H HEDH G + L ++P+YA+ A+ L+ K + + Sbjct: 61 IVQNINKVKGLFISHGHEDHIGGIPFLIKQANIPIYATKLAMSLIRNKLEEHGLLRDAIL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + R HSIP+ +VI++P GNIV TGD+K D + + + Sbjct: 121 HEIDEDSVIKFRKTQVSFYRTTHSIPDAFGIVIKTPPGNIVFTGDYKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG+EG+L L+ DSTN+ G SE+ + K+I +I++ G ++ TF+S+VSR+ Sbjct: 180 HRMAQIGSEGVLVLLGDSTNSEVPGFTQSEQVVGKSIKEIIQRVDGRIIFATFASNVSRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + D+A GRK+ + G S++ A ++G I+ D F+ YP E++I++ T Sbjct: 240 KQVTDVAVATGRKLAVFGRSMEASFRTARELGYIQAPDDTFIDGREINQYPSEKVIILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVIFSSSPIPGNTSSVNRVINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ V +HGE LA Q GI + Sbjct: 360 KVN-NIHTSGHGSQEEQKLMLRLMKPKYFVPVHGEYRMQKIQANLATQVGIPKENSFILS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L + D G DG IG ++ + R+ LS G + +D + Sbjct: 419 NGDVLAVTADSARRAGHFFAGDVYVDGNGIGDIGNIVLRDRKTLSQDGLVICVATVDYEN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK--DLKLLRESISSAL 534 + P+++ G Y + G++ + + +L + + + LR I+ L Sbjct: 479 RELVAGPDMLSRGF-IYMKESGQLLNEAQAILRDEIEELLLDTEEVLNERSLRNKITDVL 537 Query: 535 RSLLKKVWGKKPLVTVFIN 553 L K + P++ I Sbjct: 538 GPFLFKKTERHPMILPVIL 556 >gi|163790345|ref|ZP_02184777.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] gi|159874416|gb|EDP68488.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] Length = 556 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 169/559 (30%), Positives = 278/559 (49%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNEAAVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A L+ K + + Sbjct: 61 IVQNIHKVKALVITHGHEDHIGGIPFLLRQANIPIYAGPLASALIRNKLTEHGLLRDTEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D + S+ R HSIPE +V+++P GNIV TGD+K D + + + Sbjct: 121 HEIGEDDVIKFRKTSVSFFRTTHSIPEAFGIVVKTPPGNIVLTGDYKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG+EG+LAL+ DSTNA SE+ + ++I IM+ +G ++ TF+S++SR+ Sbjct: 180 HRMAKIGDEGVLALLSDSTNAEVPTFTKSEQVVGESITSIMQKVEGRIIFATFASNISRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A + RKI + G S++ V+ +G I ++ F+ P + I++ T Sbjct: 240 QQVANAAIKTKRKIAVFGRSMESSVATGRQLGYITAPEETFVEPREINRLPASESIILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVIFSSSPIPGNTSSVNRVINLLSEAGANVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M + ++P+ + +HGE H LA GI + Sbjct: 360 KVN-NVHTSGHGGQQEQKLMLRLMKPKYFIPVHGEYRMQKIHAGLAELVGIPKENSFILD 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ++ L D G DG IG ++ + R+ LS G + V V +D Sbjct: 419 NGDVIALTADSARHAGHFEAGDVYVDGKGIGDIGNVVLRDRKLLSEEGLVVVVVTIDYKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + G++ + + ++ + + L+ +I +L+ Sbjct: 479 KEVLAGPDILSRGF-IYMRESGELINDAQQVMTKSLNKSLANDKVTEQSLKNTIIESLKP 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + + P++ I + Sbjct: 538 FLYERTERHPMILPVIMPV 556 >gi|256159539|ref|ZP_05457307.1| metallo-beta-lactamase family protein [Brucella ceti M490/95/1] gi|256254826|ref|ZP_05460362.1| metallo-beta-lactamase family protein [Brucella ceti B1/94] gi|261222007|ref|ZP_05936288.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|265997971|ref|ZP_06110528.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|260920591|gb|EEX87244.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|262552439|gb|EEZ08429.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] Length = 558 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 279/554 (50%), Positives = 395/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L V VYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVSVYATPFTAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|311113242|ref|YP_003984464.1| metallo-beta-lactamase [Rothia dentocariosa ATCC 17931] gi|310944736|gb|ADP41030.1| metallo-beta-lactamase [Rothia dentocariosa ATCC 17931] Length = 574 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 171/559 (30%), Positives = 305/559 (54%), Gaps = 14/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+GE+G NM +Y + K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 14 LQKDTLRVVPLGGLGEVGRNMTVYEI----NGKLLIVDCGVLFPEESQPGVDLILPDFSY 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 70 VVDRLDDVVAMVLTHGHEDHIGAVPYLLKKRPDIPLIGSELTLALVEAKLAEHRIKPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 130 TV--KEHQIEKFGPFECEFIAVNHSIPDALAVFIRTAAGTVLHTGDFKMDQLPLDGRITD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+EG+ + DSTNA G +EK I I + ++A G ++V +FSS V R Sbjct: 188 LRHFSRLGDEGVDLFLPDSTNAEVPGFTPTEKNIGPVISSVFRDAPGRIIVASFSSHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+VL+G S+ R +++A +G +K + + + + Y ++L+++ Sbjct: 248 VQQVLDAAVERGRKVVLVGRSMVRNMTIAEKLGYLKVPEGVLVDLKKVDEYRPDELVLMC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ + V+L DTV+ +S IPGNE ++ I N L++ GV V+ Sbjct: 308 TGSQGEPMAALSRMANGDHK-VQLEPGDTVVLASSLIPGNETSVYRIINALMKLGVTVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + VHVSGH +L Y + P+ ++ +HGE HL+A+ ELA + G+ V Sbjct: 367 KG-NAKVHVSGHAAAGELLYCYNILEPKNVMPVHGEVRHLIANGELAKETGVPEEGVLLC 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L +I+ EV DG +G + + RR L G +S+ ++D Sbjct: 426 ESGTVVDLKDGVAKIVGEVPCEYLYVDGRSVGSVTEDDLKARRVLGEEGFVSIVTVIDRA 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+I GI D +I + + + P + ++ L++ + + Sbjct: 486 TKRVVTGPDIHARGIAEDDSVFDEITPKITAALEDALHRAP-EKVHTVQQLQQIVRRTIG 544 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + +KP++ + + Sbjct: 545 AWISRRLRRKPMIVPVVVE 563 >gi|307287381|ref|ZP_07567440.1| hypothetical protein HMPREF9505_00858 [Enterococcus faecalis TX0109] gi|306501554|gb|EFM70850.1| hypothetical protein HMPREF9505_00858 [Enterococcus faecalis TX0109] Length = 561 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 271/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 61 IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +I R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HRMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S++ + +G IK F+ P + +++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMG 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG +G ++ + RR LS G + +D + Sbjct: 419 NGDVLALTADSARPAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + L E++++AL+ Sbjct: 479 KEIMAGPDILSRGF-VYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEQTERHPMILPMIM 554 >gi|220924020|ref|YP_002499322.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219948627|gb|ACL59019.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 556 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 253/555 (45%), Positives = 368/555 (66%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITF 60 K +ELVF+PLGGVGEIGMN ALYG+G P++RKWIM+DCG+ F ++ +PGVDL++PD++F Sbjct: 3 KGDELVFVPLGGVGEIGMNAALYGFGPPTARKWIMVDCGMGFASEEHMPGVDLMYPDLSF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I ++R+NL+ I ITH HEDH GAL +LW L VPVYA+ F L+E +R+ E + KI Sbjct: 63 IEQQRENLLGILITHGHEDHIGALVELWPRLKVPVYATGFTKSLIETRRLGEPGAPKIDL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +++ G F +E V V HSIPE AL IR+ G +VHTGDWKLDD ++G+VT + Sbjct: 123 REVRPNERMSFGPFEVEYVPVAHSIPEANALAIRTAHGLVVHTGDWKLDDAPVVGNVTSE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+LAL+CDSTN REG SE + ++ +++++A V VTTF+S+V+RI Sbjct: 183 EVFTRLGEEGVLALVCDSTNVTREGRSPSEAEVAAHLAELIRSAPHRVAVTTFASNVARI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A+ GR++V +G ++ RV+ VA + G + F E++G PRE+++ + TG Sbjct: 243 RAVADAAQACGREVVAVGRAMDRVIDVARECGYLDGLPEFREPEAYGYLPREKVVALLTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+AL+++SR E + L+ D VIFSSRAIPGNE AIG I N LVE GV V+ + Sbjct: 303 SQGEPRAALSRVSRDEHPEIALSPGDRVIFSSRAIPGNERAIGAIINDLVEAGVEVVTDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++L MY+W +P++ V +HGEPLHL H A ++G+ V RNG Sbjct: 363 TE-LVHVSGHPRRDELAAMYRWTKPRIAVPVHGEPLHLAEHATFARKQGVEDVVKARNGT 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P +IID V HG KDG ++ D + +RR+LSF G +SV + +D H + Sbjct: 422 LIRLAPGAPQIIDHVSHGRLYKDGMVLITETDRALPERRKLSFTGIISVAIAIDQHGEMK 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I +G+P Y +G I ++ V T L + +R+D + + ++ A+R+ + + Sbjct: 482 GEPAIDLMGLPTYGRNGEAIIDIVEDVVERTFGGLSRQKRRDSEAVENAVDRAIRAAVNE 541 Query: 541 VWGKKPLVTVFINKI 555 VWGKKP V + +I Sbjct: 542 VWGKKPACHVQVVEI 556 >gi|15902169|ref|NP_357719.1| hypothetical protein spr0125 [Streptococcus pneumoniae R6] gi|15457664|gb|AAK98929.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 610 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 56 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 111 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 112 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 171 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 172 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 230 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 231 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 290 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 291 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 350 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 351 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 410 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 411 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 469 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 470 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 529 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 530 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 588 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 589 FLYENTEREPIIIPMILTPDEE 610 >gi|21224091|ref|NP_629870.1| hypothetical protein SCO5745 [Streptomyces coelicolor A3(2)] gi|256784830|ref|ZP_05523261.1| hypothetical protein SlivT_10098 [Streptomyces lividans TK24] gi|289768723|ref|ZP_06528101.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces lividans TK24] gi|3413828|emb|CAA20296.1| conserved hypothetical protein SC9A10.09 [Streptomyces coelicolor A3(2)] gi|289698922|gb|EFD66351.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces lividans TK24] Length = 561 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + VG F E V VNHSIP+ +A+ IR+P G +VHTGD+K+D + G +TD + Sbjct: 133 EGHRERVGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLADSTNAEVPGFVPPERDISNVLRQVFANARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I +V G DG +G + + R+ L G +SV V++D+ I Sbjct: 431 VDLVEGKAKITGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFVVMDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G G +L V + Q + +++ I L + Sbjct: 491 GGPHVQARG----SGIEDSAFAAVLPKVTEALERSAQDGVVEPHQMQQLIRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|291301736|ref|YP_003513014.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570956|gb|ADD43921.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 568 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 289/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+G IG NM + + + +++DCGV FP D PGVDL+ PD T ++ Sbjct: 19 LRVTPLGGLGAIGRNMTAFEF----DGRILIVDCGVLFPDMDQPGVDLILPDFTSLLDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK ++ + Sbjct: 75 DDIEAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSQFTLALIEAKLRERKIKPYTLSVE-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +G F E VNHSIP+ +A+ IR+ G ++HTGD+K+D + G VTD Sbjct: 133 EGGSEQLGPFGCEFFAVNHSIPDALAVAIRTEAGLVLHTGDFKMDQLPLDGRVTDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 ++G +G+ L+ DSTNA G SE+ I+ + DI +NA G ++V +F+S V R++ + Sbjct: 193 SLGEQGVDLLLSDSTNAEIPGFVTSEREIRPVLDDIFRNAAGRIIVASFASHVHRVQQVF 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ +G S+ R + +A D+G+++ +S + P ++++ ++TGSQG Sbjct: 253 DSAVEHGRKVAFIGRSMVRNMGIARDLGLLRIPGGTLVSMDEATRLPDDEIVYMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ + DTV+ +S +PGNE A+ + NRL G VI +D Sbjct: 313 EPMSALGRMASGDHRHITVESGDTVVLASSLVPGNETAVYGVINRLSRSGATVIHKDV-A 371 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L + ++P + +HGE HL AH L +Q G+ V NG + Sbjct: 372 KVHVSGHSPAGELLYVLNVVKPSNFMPVHGEWRHLRAHARLGIQSGVPSDQVVLAENGDV 431 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ + + DG +G + + +RR L G +S V++D+ + Sbjct: 432 VDLVNGIARVVGHIENNNIYVDGLAVGDVGEPVLTERRILGDGGFVSCTVVVDSVTGKVV 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G + L+ + + D D L++ + + + Sbjct: 492 GGPTVSAKGFSEDQTAFNAVLPLITEALDKAAAD----GVSDPHQLQQLVRRTVGKWVND 547 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 TYRRRPMIVPHVLEV 562 >gi|332670065|ref|YP_004453073.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas fimi ATCC 484] gi|332339103|gb|AEE45686.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas fimi ATCC 484] Length = 561 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 169/554 (30%), Positives = 285/554 (51%), Gaps = 17/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GE+G NMA+ Y + ++IDCGV FP+D PGVDL+ PD +I Sbjct: 19 LRVVALGGLGEVGRNMAVLEYA----GRLLVIDCGVLFPEDHQPGVDLILPDFDYIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S + +EAK R+ + + Sbjct: 75 DDIDAIVLTHGHEDHIGAVPYLLRLRRDIPLVGSQLTLAFVEAKLKEHRIQPLTLAV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +GAF E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD + Sbjct: 133 EGQTETLGAFECEFVAVNHSIPDALAVAVRTGAGTVLHTGDFKMDQLPLDGRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+ M DSTNA G E+GI + + + ++V +F+S V R++ ++ Sbjct: 193 RLGEQGVDLFMVDSTNAEVPGFVAQERGIGPVLDAVFAESTKRIIVASFASHVHRVQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GR++ L+G S+ R +++A D+G +K D + + ++ P ++++++ TGSQG Sbjct: 253 DAAAAHGRRVALVGRSMVRNMAIASDLGYLKVPDGVIVDLKAVDDLPDDEVVLMCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + + V + DTVI +S IPGNE A+ + N L G RV+ Sbjct: 313 EPMAALSRMANNDHK-VSVGPGDTVILASSLIPGNENAVFRVINGLTRLGARVVHSG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +RP+ ++ +HGE HLVA+ LA+Q G+ V +G + Sbjct: 371 KVHVSGHASAGELLYCYNILRPRNVMPVHGEVRHLVANAALAVQTGVPADRVVLAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V G DG +G D + RR L G +S+ ++ + + Sbjct: 431 VDLVDGRASVVGAVPCGYVYVDGSSVGGITDAELKDRRILGDEGFISIFAVVSSADGKVL 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I G D I L + + D L++ + + + Sbjct: 491 AGPQIHARGFAEQDAVFEDILPELTRALEEA----AAQGAVDTHQLQQVMRRVVGRWVSN 546 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 547 RLRRRPMIIPVVVE 560 >gi|326384511|ref|ZP_08206191.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196856|gb|EGD54050.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 616 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 173/564 (30%), Positives = 289/564 (51%), Gaps = 16/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L + LGG+GEIG NM ++ Y K +++DCGV FP+D PGVDL+ PD + Sbjct: 64 LAKGGLRVVALGGIGEIGRNMTVFEY----DGKLLIVDCGVLFPEDQQPGVDLILPDFGY 119 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ A+ +TH HEDH GA+ L +P+ S F + L+ AK R+ K+ Sbjct: 120 IEDRVDDIEAVVLTHGHEDHIGAVPFLLKLRGDIPIVGSRFTLALVAAKCREHRLRPKLV 179 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD+ D G F E VNHSIP+ +A+ IR+P G ++HTGD KLD + +TD Sbjct: 180 QV--AEGDRQDYGVFDCEFFAVNHSIPDAVAVAIRTPAGLVLHTGDIKLDQLPLDKRLTD 237 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+EG+ + DSTNA G E+ I + ++ A+ V+V +F+S V R Sbjct: 238 LAGFSRLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDTVIGKARQRVIVASFASHVHR 297 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D+A + GR++ +G S+ R + +A D+G + D + + ++ P +L++I+ Sbjct: 298 IQQIVDVAHRHGRRVTFVGRSMVRNMQIAQDLGYLTVPDGVVVDMDTAATLPDHRLVLIS 357 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++RGE R + + D V+ +S IPGNE ++ + N L ++G V+ Sbjct: 358 TGSQGEPLSALSRMARGEHRQINIRADDLVVLASSLIPGNENSVFAVVNGLAKRGATVVT 417 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + VHVSGH +L +Y +RP + +HGE HL A+ LA+ G+ V Sbjct: 418 QAS-AKVHVSGHASAGELLYLYNAVRPSNAMPVHGEWRHLRANAALAVATGVPEDRVVLA 476 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L +I V G DG +G + ++ R L G +++ V +D Sbjct: 477 EDGVVVDLVDGRAQITGRVPVGYVYVDGLSVGDVGESTLSDRLVLGEGGFIAITVAIDAA 536 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 P + G D V + +L D + + + A+ Sbjct: 537 TGATVSKPTVSGRGFS----DDPGALAAAADLVNKALTELANEGVTDTHRIAQGVRRAVG 592 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 + + + ++P++ + + R Sbjct: 593 RWVGEKYRRRPMIVPTVIAVGESR 616 >gi|257420577|ref|ZP_05597567.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|257162401|gb|EEU92361.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|315156404|gb|EFU00421.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 561 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 61 IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +I R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HRMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S++ + +G IK F+ P + +++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMG 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + DG +G ++ + RR LS G + +D + Sbjct: 419 NGDVLALTADSARPAGHINANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + L E++++AL+ Sbjct: 479 KEIMAGPDILSRGF-VYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEQTERHPMILPMIM 554 >gi|229100066|ref|ZP_04230975.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] gi|229106461|ref|ZP_04236820.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228676992|gb|EEL31479.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228683355|gb|EEL37324.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] Length = 556 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 297/558 (53%), Gaps = 11/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + LGG+ EIG NM Y S ++IDCG FP + L G+DL+ PDI +++ Sbjct: 5 ENAVSIFALGGLNEIGKNMYAIEY----SNDIVIIDCGNKFPDESLLGIDLIIPDIAYLV 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + A+ +TH HEDH G + L+VPVYA+ F +GL+E K ++ + I Sbjct: 61 ENKDKVRALIVTHGHEDHIGGIPFFLKKLNVPVYATRFTLGLIEIKLKEHKLLGESELIE 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + +G S+ +V HSIP+ + +V +P GNIVHTGD+K D + +D Sbjct: 121 INSNSNLTIGGISVSFFKVTHSIPDCLGIVFHTPEGNIVHTGDFKFDLTPANNENSDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+L L+ +STNA R G SE+ + +++ + A+ V+V+TF+S++SR++ Sbjct: 181 MAEIGKDGVLLLLSESTNAERPGLTPSEQMVGEHVEAVFMKAERKVIVSTFASNISRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A++ RK+ LLG S+ VV+VA++ G + D + ++ E++ ++ TGS Sbjct: 241 VVNAAQKTNRKLALLGRSMVNVVAVAMERGYLTIPDGMLIAPHEINEMAPERVAILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED- 360 QGEP +ALA+LS G R V + +DTVIF++ IPGNE I I + L G +VI Sbjct: 301 QGEPLAALARLSTGNFRGVDILPEDTVIFAAGPIPGNERNITSIVDNLFALGAKVIYGSG 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HVSGH Y DLK M ++P+ + IHGE L H+ L G+ + N Sbjct: 361 STSGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEFRMLHHHRLLGESVGVEQGSTFIINN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + ++ G DG + ++ + R+QLS G L + + + Sbjct: 421 GDVVDIEHTIARQTRKIPVGNTYVDGGDVDNIGEIVLRDRKQLSEDGMLMIVLTMSKSEG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+ + G D D ++ + + + I TV +L + + ++++ I ++R Sbjct: 481 KLISEPDTISRGFV--DRDFSELRRDVNRLTIKTVNELQEANKNSWNVMKKQIKKSIRQY 538 Query: 538 LKKVWGKKPLVTVFINKI 555 + KKP++ + +I Sbjct: 539 VYTHTKKKPMIVPILIEI 556 >gi|29377388|ref|NP_816542.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227518210|ref|ZP_03948259.1| metallo-beta-lactamase [Enterococcus faecalis TX0104] gi|227554371|ref|ZP_03984418.1| metallo-beta-lactamase [Enterococcus faecalis HH22] gi|229547597|ref|ZP_04436322.1| metallo-beta-lactamase [Enterococcus faecalis TX1322] gi|229548195|ref|ZP_04436920.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 29200] gi|255970847|ref|ZP_05421433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|255974422|ref|ZP_05425008.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|256618292|ref|ZP_05475138.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256761222|ref|ZP_05501802.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256852485|ref|ZP_05557861.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256958159|ref|ZP_05562330.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256960305|ref|ZP_05564476.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|256962741|ref|ZP_05566912.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|257077432|ref|ZP_05571793.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis JH1] gi|257083377|ref|ZP_05577738.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|257088065|ref|ZP_05582426.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|257091144|ref|ZP_05585505.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257417091|ref|ZP_05594085.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis AR01/DG] gi|257417805|ref|ZP_05594799.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|293382173|ref|ZP_06628116.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|293388516|ref|ZP_06633020.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|294779647|ref|ZP_06745038.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300860840|ref|ZP_07106927.1| ribonuclease J 1 [Enterococcus faecalis TUSoD Ef11] gi|307268849|ref|ZP_07550216.1| hypothetical protein HMPREF9498_00981 [Enterococcus faecalis TX4248] gi|307272663|ref|ZP_07553911.1| hypothetical protein HMPREF9514_01425 [Enterococcus faecalis TX0855] gi|307275092|ref|ZP_07556246.1| hypothetical protein HMPREF9521_00697 [Enterococcus faecalis TX2134] gi|307278555|ref|ZP_07559627.1| hypothetical protein HMPREF9515_00881 [Enterococcus faecalis TX0860] gi|307290819|ref|ZP_07570713.1| hypothetical protein HMPREF9509_01118 [Enterococcus faecalis TX0411] gi|312900400|ref|ZP_07759710.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312902909|ref|ZP_07762106.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312905732|ref|ZP_07764754.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909073|ref|ZP_07767933.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|312952212|ref|ZP_07771090.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|29344855|gb|AAO82612.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227074366|gb|EEI12329.1| metallo-beta-lactamase [Enterococcus faecalis TX0104] gi|227176490|gb|EEI57462.1| metallo-beta-lactamase [Enterococcus faecalis HH22] gi|229306674|gb|EEN72670.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 29200] gi|229307287|gb|EEN73274.1| metallo-beta-lactamase [Enterococcus faecalis TX1322] gi|255961865|gb|EET94341.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|255967294|gb|EET97916.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|256597819|gb|EEU16995.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256682473|gb|EEU22168.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256712339|gb|EEU27371.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256948655|gb|EEU65287.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256950801|gb|EEU67433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|256953237|gb|EEU69869.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|256985462|gb|EEU72764.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis JH1] gi|256991407|gb|EEU78709.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|256996095|gb|EEU83397.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|256999956|gb|EEU86476.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257158919|gb|EEU88879.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ARO1/DG] gi|257159633|gb|EEU89593.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|291080456|gb|EFE17820.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|291082120|gb|EFE19083.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|294453304|gb|EFG21715.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|295114295|emb|CBL32932.1| RNase J1 [Enterococcus sp. 7L76] gi|300849879|gb|EFK77629.1| ribonuclease J 1 [Enterococcus faecalis TUSoD Ef11] gi|306498128|gb|EFM67651.1| hypothetical protein HMPREF9509_01118 [Enterococcus faecalis TX0411] gi|306504792|gb|EFM73990.1| hypothetical protein HMPREF9515_00881 [Enterococcus faecalis TX0860] gi|306508210|gb|EFM77326.1| hypothetical protein HMPREF9521_00697 [Enterococcus faecalis TX2134] gi|306510658|gb|EFM79680.1| hypothetical protein HMPREF9514_01425 [Enterococcus faecalis TX0855] gi|306514853|gb|EFM83401.1| hypothetical protein HMPREF9498_00981 [Enterococcus faecalis TX4248] gi|310628211|gb|EFQ11494.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310629868|gb|EFQ13151.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310633681|gb|EFQ16964.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311290635|gb|EFQ69191.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311292490|gb|EFQ71046.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315028142|gb|EFT40074.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315030877|gb|EFT42809.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315032294|gb|EFT44226.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315036227|gb|EFT48159.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315145412|gb|EFT89428.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315148796|gb|EFT92812.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315151665|gb|EFT95681.1| conserved hypothetical protein [Enterococcus faecalis TX0012] gi|315154535|gb|EFT98551.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315160104|gb|EFU04121.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315163276|gb|EFU07293.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315165919|gb|EFU09936.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315169326|gb|EFU13343.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315171819|gb|EFU15836.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315174743|gb|EFU18760.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315576276|gb|EFU88467.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315578916|gb|EFU91107.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315582768|gb|EFU94959.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|323478889|gb|ADX78328.1| metallo-beta-lactamase [Enterococcus faecalis 62] gi|327536077|gb|AEA94911.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis OG1RF] gi|329573296|gb|EGG54909.1| ribonuclease J 1 [Enterococcus faecalis TX1467] Length = 561 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 271/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 61 IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +I R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HRMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S++ + +G IK F+ P + +++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMG 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG +G ++ + RR LS G + +D + Sbjct: 419 NGDVLALTADSARPAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + L E++++AL+ Sbjct: 479 KEIMAGPDILSRGF-VYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEQTERHPMILPMIM 554 >gi|293375445|ref|ZP_06621726.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|292645998|gb|EFF64027.1| conserved hypothetical protein [Turicibacter sanguinis PC909] Length = 554 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 292/558 (52%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N +L +PLGG+GEIG NM Y + I+IDCG++FP +D+ GVDL+ P+I ++ Sbjct: 3 ENIKLKVIPLGGLGEIGKNMTAIEY----DDEIIVIDCGIAFPDEDMYGVDLIIPEINYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH GA+ + L++P+Y + +GL+E K + + Sbjct: 59 LENEDKVKGLFITHGHEDHIGAIPFILKQLNMPIYGTKLTLGLVENKIREHGLLQTTKLH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + SIE +R HSI + +L I +PVG + HTGD+K+D I D + Sbjct: 119 VVNPRDVIAFNHLSIEFIRTTHSIADACSLAIHTPVGILFHTGDFKVDHTPIDNQPMDLE 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + GIL LM DSTN R+G +SEK I + A G ++V TF+S++ R++ Sbjct: 179 RISELAQAGILLLMSDSTNVERKGYTMSEKAIGDTFMKLFDRATGRIIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID + RK+ G S++ + VA+++G + D + ++ P +L +I TG Sbjct: 239 QIIDASRAFNRKVAFSGRSMENISKVAMELGYLHIDDDMLININQINTVPENELTLIVTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP ALA+++ R +KL D I S+ IPGN+ +G + N+L ++G VI +D Sbjct: 299 SQGEPMGALARIAFSTHRQLKLQPNDLFIISASPIPGNDKLVGRVINQLYKKGAEVIYKD 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 E VHVSGH +LK + + P+ + +HGE HLV HK LA+ GI + + Sbjct: 359 LES-VHVSGHACQEELKLILRLTHPKFFMPVHGEYRHLVHHKNLAVSVGIPKDHIKVLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L L + +I V G L DG +G ++ + R+ L+ G + + +D Sbjct: 418 GQILELTNNSAKINGRVRTGAILVDGIGVGDVGNIVLRDRKMLAEGGMIIIVATIDKQSK 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P I+ G Y + ++ + + + L + ++ +++ + +L Sbjct: 478 ELISEPYILTRGF-VYVKEAEELMNNIKEIAKNELQMLLENDTNEIMVMKTRVKKSLERY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P + I ++ Sbjct: 537 LYEQTKRRPSIFPIIMEV 554 >gi|325844446|ref|ZP_08168173.1| hypothetical protein HMPREF9402_0228 [Turicibacter sp. HGF1] gi|325489120|gb|EGC91504.1| hypothetical protein HMPREF9402_0228 [Turicibacter sp. HGF1] Length = 554 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 173/558 (31%), Positives = 292/558 (52%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N +L +PLGG+GEIG NM Y + I+IDCG++FP +D+ GVDL+ P+I ++ Sbjct: 3 ENIKLKVIPLGGLGEIGKNMTAIEY----DDEIIVIDCGIAFPDEDMYGVDLIIPEINYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + +FITH HEDH GA+ + L++P+Y + +GL+E K + + Sbjct: 59 LENEDKVKGLFITHGHEDHIGAIPFILKQLNMPIYGTKLTLGLVENKIREHGLLQTTKLH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D + SIE +R HSI + +L I +PVG + HTGD+K+D I D + Sbjct: 119 VVNPRDVIAFNHLSIEFIRTTHSIADACSLAIHTPVGILFHTGDFKVDHTPIDNQPMDLE 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + GIL LM DSTN R+G +SEK I + A G ++V TF+S++ R++ Sbjct: 179 RISELAQAGILLLMSDSTNVERKGYTMSEKAIGDTFMKLFDRATGRIIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID + RK+ G S++ + VA+++G + D + ++ P +L +I TG Sbjct: 239 QIIDASRAFNRKVAFSGRSMENISKVAMELGYLHIDDDMLININQINTVPENELTLIVTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP ALA+++ R +KL D I S+ IPGN+ +G + N+L ++G VI +D Sbjct: 299 SQGEPMGALARIAFSTHRQLKLQPNDLFIISASPIPGNDKLVGRVINQLYKKGAEVIYKD 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 E VHVSGH +LK + + P+ + +HGE HLV HK LA+ GI + + Sbjct: 359 LES-VHVSGHACQEELKLILRLTHPKFFMPVHGEYRHLVHHKNLAVSVGIPKDHIKVLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L L + +I V G L DG +G ++ + R+ L+ G + + +D Sbjct: 418 GQILELTNNSAKINGRVRTGAILVDGIGVGDVGNIVLRDRKMLAEGGMIIIVATIDKQSK 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P I+ G Y + ++ + + + L + ++ +++ + +L Sbjct: 478 ELISEPYILTRGF-VYVKEAEELMNNIKEIAKNELQMLLESDTNEIMVMKTRVKKSLERY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P + I ++ Sbjct: 537 LYEQTKRRPSIFPIIMEV 554 >gi|320008193|gb|ADW03043.1| RNA-metabolising metallo-beta-lactamase [Streptomyces flavogriseus ATCC 33331] Length = 561 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 289/555 (52%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTTIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ ++ Sbjct: 75 DDIEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVT-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E + VNHSIP+ +A+ IR+P G V TGD+K+D + G +TD + Sbjct: 133 EGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGLAVATGDFKMDQLPLDGRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKTLDDLPDDEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L +I+ +V G DG +G + + RR L G +SV +++D + I Sbjct: 431 VDLVDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFIVVDSSSGKIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D G ++ K V + Q + L++ + + + Sbjct: 491 GGPHIQARG---SGIDDGAFTAVVPK-VEEALNKSAQDGVMEPHQLQQLVRRTVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|56419813|ref|YP_147131.1| hypothetical protein GK1278 [Geobacillus kaustophilus HTA426] gi|297530547|ref|YP_003671822.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. C56-T3] gi|56379655|dbj|BAD75563.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|297253799|gb|ADI27245.1| RNA-metabolising metallo-beta-lactamase [Geobacillus sp. C56-T3] Length = 556 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 170/556 (30%), Positives = 279/556 (50%), Gaps = 12/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ LGGVGEIG NM + +ID GV FP+D++ G+D V PDIT++++ Sbjct: 9 EKIRIFALGGVGEIGKNMYVVE----LDEDIFVIDAGVMFPEDEMLGIDKVIPDITYLIE 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIF+TH HE+H GA+ + L VPVY + +GL EA + VS Sbjct: 65 RQHRIQAIFLTHGHEEHMGAIAYVLKQLSVPVYGTKLTLGLAEALLKEQGVSG-AKLNEV 123 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++ + R HSIP+++ + + + G IV+T D+K D + TD + Sbjct: 124 HPDAELVFDKAKVTFFRTIHSIPDSIGISLHTSQGAIVYTSDFKFDQTPYGNNRTDLGKM 183 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+L L+ DSTNA R G S+ + I D++ +AKG V V ++S+++RI+ + Sbjct: 184 AQIGEEGVLCLLSDSTNAERPGYSGSDTVVAYEIADVIGHAKGRVFVACYASNITRIQQV 243 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + A Q GRK+ ++G +L +V+ +A+ +G + D++ +S Y +L+++ TG Sbjct: 244 LYAAHQSGRKVAVIGKTLHKVMDIAVRLGYLHVPDKVTISAHDIDRYNDRELVILTTGGH 303 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL +++R + V + E DTVI ++ +PG E+ + L G VI + Sbjct: 304 GEPMSALWRMARQANKQVNIKEGDTVIVAASVMPGYELGFAKTIDALYRAGANVIY--RD 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M ++P+ + +HGE AH LA GI + G+ Sbjct: 362 RQVHVSGHGCQEELKLMLNLMKPKYFIPVHGEYRMQKAHARLAKAVGISEERTFLIDKGE 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ +V +G L DG IG ++ + RR LS G L V L+ I Sbjct: 422 VIEFRGGAARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIAVVTLNKEAKTI 481 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + + + K V + + + L+ +I AL L Sbjct: 482 AAGPEIISRGF-VYMRESETLLEEAEKMVAAIIERCLESYMLEWSSLKANIREALSQFLF 540 Query: 540 KVWGKKPLVTVFINKI 555 + ++P++ I ++ Sbjct: 541 EKTKRRPMILPIIMEV 556 >gi|17987426|ref|NP_540060.1| metal dependent hydrolase [Brucella melitensis bv. 1 str. 16M] gi|225852333|ref|YP_002732566.1| hypothetical protein BMEA_A0859 [Brucella melitensis ATCC 23457] gi|256044496|ref|ZP_05447400.1| hypothetical protein Bmelb1R_08364 [Brucella melitensis bv. 1 str. Rev.1] gi|256113352|ref|ZP_05454210.1| hypothetical protein Bmelb3E_11547 [Brucella melitensis bv. 3 str. Ether] gi|256264168|ref|ZP_05466700.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|260563850|ref|ZP_05834336.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|265990920|ref|ZP_06103477.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994758|ref|ZP_06107315.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|17983118|gb|AAL52324.1| metal dependent hydrolase [Brucella melitensis bv. 1 str. 16M] gi|225640698|gb|ACO00612.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260153866|gb|EEW88958.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|262765871|gb|EEZ11660.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263001704|gb|EEZ14279.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094386|gb|EEZ18231.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326408840|gb|ADZ65905.1| metal dependent hydrolase [Brucella melitensis M28] gi|326538556|gb|ADZ86771.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 558 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 280/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|159900929|ref|YP_001547176.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893968|gb|ABX07048.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 569 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 168/575 (29%), Positives = 281/575 (48%), Gaps = 26/575 (4%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L +PLGG E+G NM ++ Y ++ D GV FP+ ++ GVDLV PDIT+ Sbjct: 1 MTKNKLRVIPLGGASEVGRNMWVFEY----EEDIVICDMGVMFPESEMMGVDLVLPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + + N+ I +TH HEDH GA+ L L P VY + +GLL K R++ K+ Sbjct: 57 LRDKVANIRGILLTHGHEDHIGAVPWLIGDLGFPTVYGTTLTLGLLSNKLKEHRLTDKVA 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 GDK +G F+IE + HSIP+++ + SP G ++ DWKLD + T+ Sbjct: 117 TKVIAPGDKFQLGCFTIEPFHIAHSIPDSVGFGLTSPAGLALYITDWKLDHTPVDNWPTE 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L G + L+ D +G SE+ + I A G V++ TF+S++SR Sbjct: 177 IDRLVDFGRRNPIVLVTDCVRVESKGYTPSERVVGDAFDQIFATAPGRVIMATFASNISR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I+ A GRK+V +G S++ S+A ++G ++ D + P +Q+ ++ Sbjct: 237 VQMAINAAIDYGRKVVPVGRSMENNTSIARELGYLEVPDGTLIRAGDMKNLPDDQIAIVC 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + R + + DTV+ S+ IPGNEV++ + + L + G VI Sbjct: 297 TGSQGEPMAALSRMANRDHRQISIQRGDTVVISASPIPGNEVSVYKVIDNLYKLGANVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 ++ PVHVSGH +LK + ++PQ ++ HG+ HL +K+LA G V Sbjct: 357 G-SDLPVHVSGHAAQEELKMLLNLVQPQYVIPFHGDYRHLARYKQLAEGMGFNGDNVLIA 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G ++ + +++ G DG +G + R+ LS G L V V +D Sbjct: 416 EGGSIMEFSQNYGKLVSRAPVGHVFVDGVSVGDIGGAVVRDRQMLSKDGILMVVVSVDLQ 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---LPQFRRKDLKLLRE---- 528 N+ P+IV G + D + + + V + + +P D + E Sbjct: 476 TGNLVAGPDIVSRGFVST-RDSTDLIEGAKEAVRASFSESYVVPARAFSDGEETAEGNSP 534 Query: 529 --------SISSALRSLLKKVWGKKPLVTVFINKI 555 I + L + ++P+V + ++ Sbjct: 535 AVSSPAARKIKEVVGRFLYERTRRRPMVIPVVMEV 569 >gi|302865991|ref|YP_003834628.1| RNA-metabolising metallo-beta-lactamase [Micromonospora aurantiaca ATCC 27029] gi|315502551|ref|YP_004081438.1| RNA-metabolising metallo-beta-lactamase [Micromonospora sp. L5] gi|302568850|gb|ADL45052.1| RNA-metabolising metallo-beta-lactamase [Micromonospora aurantiaca ATCC 27029] gi|315409170|gb|ADU07287.1| RNA-metabolising metallo-beta-lactamase [Micromonospora sp. L5] Length = 562 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 173/555 (31%), Positives = 291/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+G IG NM ++ Y K +++DCGV FP + PGVDL+ PD I+ Sbjct: 19 LRIIPLGGLGAIGRNMTVFEY----DGKLLIVDCGVLFPDVEQPGVDLILPDFGPILDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK R+ + + Sbjct: 75 ADVQAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSQFTLALVEAKLAERRIQPYTLTV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD Sbjct: 133 EGGRERLGPFECEFFAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDGRITDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA G E+ I + I AKG ++V +F+S V R++ + Sbjct: 193 RLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKAKGRIIVASFASHVHRVQQVF 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G++ L + E P EQ+++++TGSQG Sbjct: 253 DSAVEHGRKVALIGRSMVRNMGIARDLGLLNIPPGLVVGIEEATNLPPEQIVLMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ +A DTV+ +S +PGNE ++ + NRL G V+ +D Sbjct: 313 EPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLARAGAVVVHKDV-A 371 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L + +RP L+ +HGE HL AH L ++ G+A V +G + Sbjct: 372 KVHVSGHAPAGELLYLLNVVRPSNLMPVHGEWRHLRAHARLGIESGVAPDRVVLCEDGDV 431 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V DG +G ++ + +RR L G ++ V++D+ + Sbjct: 432 VDLVEGRASLVGRVKSRYVYVDGLAVGDVSESLLTERRILGDGGFIAATVVVDSVTGKVV 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + + ++ V + D L++ + + + Sbjct: 492 AGPTVSAKGFS----EDPEAFNAVVPLVTEALNRAAADGITDPHQLQQIVRRTVGRWVND 547 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 AYRRRPMIVPTVVEV 562 >gi|49477681|ref|YP_036525.1| metallo-beta-lactamase superfamily protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329237|gb|AAT59883.1| probable metallo-beta-lactamase superfamily protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 555 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 158/560 (28%), Positives = 280/560 (50%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ + LGG+GEIG NM + Y + I++D G FP+ +L G+D V PD + Sbjct: 4 LQSGKTKIFALGGLGEIGKNMYVIEY----EDEIIIVDAGFKFPESELLGIDYVIPDYPY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +FITH HEDH G + L+ + VP+YA A L+++K + Sbjct: 60 LERNKDKIKGLFITHGHEDHIGGVPFLFKRIQVPIYAGKLAAALIKSKFEAHNIRHVEIR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V+ + R HSIP+ +V+ +P GN+VHTGD+K D + + + Sbjct: 120 NILDETE-VEFQHTKVRFYRTTHSIPDAFGIVVTTPNGNVVHTGDFKFDFTPVGTE-ANL 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ G +SEK + +++ +I A+G +L TF+S+V R+ Sbjct: 178 HKIAEIGKEGVLCLLSDSTNSEVPGFSMSEKKVGQSVKEIFSGAQGRILFATFASNVHRL 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + RK+V++G S+++ + + D+G I+ + +F+ P Q+ +I T Sbjct: 238 QQVVEASILYNRKVVVVGRSMEKTIQIGRDLGYIQAPEDIFVGVHEINHIPSHQVTIICT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +++ DTV+ SS IPGN +++ N+L G VI Sbjct: 298 GSQGEPMAALSRIAYNNHRQIQIIPGDTVVLSSSPIPGNVLSVNRTINQLYRVGANVIHH 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVR 417 +H SGH + K M ++P+ + IHGE L H ELA++ + + Sbjct: 358 KI-SDIHTSGHGAQEEQKLMLSLLKPKYFMPIHGEYRMLKKHVELAIECGVPVENCFIMD 416 Query: 418 NGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++L I + + DG IG + + RR LS G + +++ LD Sbjct: 417 NGQILEFSKGEANISGKTIPSQAVYVDGSGIGDIGSIVLRDRRILSEEGIIIISLNLDCK 476 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P IV G Y + + + V V + +++S+ + L Sbjct: 477 QKRLVSQPAIVTRGF-VYMRESEVLMIKIENVVFECVTSVLNEGIVSWAQIKQSLVNVLG 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L G++P++ I ++ Sbjct: 536 PFLFSKIGRRPMILPIIMEV 555 >gi|315122710|ref|YP_004063199.1| beta-lactamase domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496112|gb|ADR52711.1| beta-lactamase domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 560 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 432/560 (77%), Positives = 511/560 (91%), Gaps = 1/560 (0%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK E+LVFLPLGGVGEIGMNMALYG+G+P++RKWIM+DCGVSFPKDDLPGVDLVFPDIT Sbjct: 1 MKEQEDLVFLPLGGVGEIGMNMALYGFGNPNNRKWIMVDCGVSFPKDDLPGVDLVFPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 F+++ERKNLMAI ITHAHEDHYGALHDLWSFL+VPVYASPFAIGLLEAK VYER K IP Sbjct: 61 FVLEERKNLMAIIITHAHEDHYGALHDLWSFLNVPVYASPFAIGLLEAKGVYERFPKNIP 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 CISFQAGD++D+G FSI+S++VNHSIPE+MAL+IRSPVGNIVHTGDWKLDD ++LGD+TD Sbjct: 121 CISFQAGDQIDIGPFSIKSIQVNHSIPESMALIIRSPVGNIVHTGDWKLDDTSVLGDLTD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +DSL AIG+EG+LALMCDSTNAM GT +SEK + +N+Y+I+K +G ++T F+SSVSR Sbjct: 181 EDSLRAIGDEGVLALMCDSTNAMLHGTPVSEKDVAQNLYNIIKKTEGYAVITAFASSVSR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 IRSIID++E++GRK++LLGSSLKRVV+V+I +G+IKKDQ F+S+ESFGLYPRE+L+VIAT Sbjct: 241 IRSIIDVSEKLGRKVLLLGSSLKRVVNVSIGIGLIKKDQSFVSEESFGLYPREKLVVIAT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEPRSALAQLSRGEMRN+KL+ KD VIFSSR+IPGNEVAIG +KN+L+EQGV+++++ Sbjct: 301 GSQGEPRSALAQLSRGEMRNLKLSNKDKVIFSSRSIPGNEVAIGQLKNQLIEQGVQIVSD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 DAE PVHVSGHPY DLKRMYQWIRP+++VAIHGE HLVA KELALQ GIA VP VRNG Sbjct: 361 DAEHPVHVSGHPYRKDLKRMYQWIRPKIMVAIHGELSHLVAQKELALQSGIAQVPFVRNG 420 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 KMLRLFPDP+EI+DEVVHG FLKDGFL+GKF +LGIAKR+QLSFVGH+SVNVLLDNHY+I Sbjct: 421 KMLRLFPDPVEIVDEVVHGRFLKDGFLVGKFEELGIAKRKQLSFVGHISVNVLLDNHYDI 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 GVPE++DIGIP Y DG KI+KLL KTVITTVV+ PQ RRKDLK LRESI +LRS LK Sbjct: 481 IGVPEVIDIGIPTYGEDGIKINKLLSKTVITTVVNFPQNRRKDLKALRESIGRSLRSCLK 540 Query: 540 KVWGKKPLVTVFINKISRQR 559 + WGKKP+VTVF+++ISRQR Sbjct: 541 QAWGKKPIVTVFVSRISRQR 560 >gi|145593938|ref|YP_001158235.1| beta-lactamase domain-containing protein [Salinispora tropica CNB-440] gi|145303275|gb|ABP53857.1| beta-lactamase domain protein [Salinispora tropica CNB-440] Length = 562 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 292/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+G IG NM ++ Y + K +++DCGV FP + PGVDL+ PD I+ Sbjct: 19 LRIIPLGGLGAIGRNMTVFEY----NGKLLVVDCGVLFPDVEQPGVDLILPDFAPILDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK R+ + + Sbjct: 75 DDVQAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSEFTLALVEAKLAERRIQPYTLTV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ +R+P G ++HTGD+K+D + G +TD Sbjct: 133 EGGREQLGPFECEFFAVNHSIPDALAVALRTPAGLVLHTGDFKMDQLPLDGRITDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA G E+ I + I A+G ++V +F+S V R++ + Sbjct: 193 RLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKARGRIIVASFASHVHRVQQVF 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G++ L + + P +Q+++++TGSQG Sbjct: 253 DSAVEHGRKVALIGRSMVRNMGIARDLGLLNIPPGLVVGLDEATSMPPDQIVLMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ +A DTV+ +S +PGNE ++ + NRL G V+ +D Sbjct: 313 EPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLARAGAVVVHKDV-A 371 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH +L + +RP L+ +HGE HL AH L ++ G+ V +G + Sbjct: 372 KVHVSGHAPAGELLYLLNIVRPSNLMPVHGEWRHLRAHARLGVESGVAADRVVLCEDGDV 431 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V DG +G ++ + +RR L G ++ V++D+ + Sbjct: 432 VDLVEGRASLVGHVKSRYVYVDGLAVGDVSESLLTERRILGDGGFIAATVVVDSVTGKVV 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G + L+ + + D D L++ + + + Sbjct: 492 GGPTVSAKGFSEDPEAFSPVVPLITEALNRAASD----GITDPHQLQQIVRRTVGRWVND 547 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 AYRRRPMIVPNVVEV 562 >gi|239826673|ref|YP_002949297.1| beta-lactamase [Geobacillus sp. WCH70] gi|239806966|gb|ACS24031.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 555 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 283/563 (50%), Gaps = 16/563 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E++ LGGVGEIG NM + +ID GV FP+D++ G+D V PD Sbjct: 1 MKTKQVEKIRIFSLGGVGEIGKNMYVVE----LDDDIFVIDAGVMFPEDEMLGIDKVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK 116 I+++++ + + AIF+TH HE+H GA+ + + VPVY + +GL E+ + ++ Sbjct: 57 ISYLIERQDRIKAIFLTHGHEEHIGAIAYVLKKITAVPVYGTKLTLGLAESILKEQGIT- 115 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I ++ ++ + R HSIP+++ + I + G IV+T D+K D + Sbjct: 116 NAKLIEIRSDSEILFDKAKVTFFRTIHSIPDSVGISIHTSQGAIVYTSDFKFDQTPYGKN 175 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D + IG +G+L L+ DSTNA R G S+ + + I D++ NA G V V ++S+ Sbjct: 176 RADLGKMAQIGEQGVLCLLSDSTNAERPGYTGSDTLVAQEIADVIYNANGRVFVACYASN 235 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 ++RI+ ++ A+ GRK+ ++G +L +V+ +A+ +G + +++ +S Y ++LI Sbjct: 236 ITRIQQVLHAAKMYGRKVAVVGKTLHKVMDIAVRLGYLHLPEKVTISIHDIDRYDDKELI 295 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ TG G+P SALA++++ + V + E DTVI ++ +PG E+ + L G Sbjct: 296 ILTTGGHGQPMSALARMAKQVHKQVNIKEGDTVIVAASVMPGYELVFSKTIDALYRAGAN 355 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACV 413 VI E VHVSGH +LK M ++P+ + +HGE AH LA GI Sbjct: 356 VIY--RERKVHVSGHACQEELKLMLNLMKPKYFIPVHGEYRMQKAHANLAKAVGISEDRT 413 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + G ++ +V +G L DG IG ++ + RR LS G L V V L Sbjct: 414 FLIDKGDVIEFRNGVARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIVVVTL 473 Query: 474 DNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 I PEI+ G Y + + K V V Q + L+ +I Sbjct: 474 SKESKKIIAGPEIISRGF-VYVRESESLLDEATKIVANIVNKCLQTYMIEWSSLKSNIRE 532 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 AL L + +KP++ I ++ Sbjct: 533 ALSQFLFEKTKRKPMILPIIMEV 555 >gi|158313052|ref|YP_001505560.1| beta-lactamase domain-containing protein [Frankia sp. EAN1pec] gi|158108457|gb|ABW10654.1| beta-lactamase domain protein [Frankia sp. EAN1pec] Length = 561 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 165/557 (29%), Positives = 285/557 (51%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGG+GEIG NM ++ + + +++DCGV FP+ D PGVDL+ PD T I Sbjct: 17 DGLRIIPLGGLGEIGRNMTVFEHA----GRLLIVDCGVLFPETDQPGVDLILPDFTAIRD 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +++ A+ +THAHEDH GA+ L +P+ + + L+ AK R+ I Sbjct: 73 RLQDIEAVILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLAEHRIQPVTLQI- 131 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ G F +E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 132 -REEERHSFGPFDLEFLAVNHSIPDAVAVAIRTDAGLVLHTGDFKMDQLPLDGRLTDLGG 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ L+ DSTNA G SE+ I + + + A ++V F+S V R++ Sbjct: 191 FARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVACFASHVHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D AE GR + +G S+ R + VA D+G+++ L + P + +++TGS Sbjct: 251 VLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPDRNICLVSTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL++++ + +++ E DTV+ +S IPGNE A+ + N L G RV+ + Sbjct: 311 QGEPLSALSRMANRDHA-IRIQEGDTVVLASSLIPGNETAVFRVINGLTRWGARVVHKGV 369 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 VH SGH +L + +P ++ +HGE HL AH LA G+ V +G Sbjct: 370 -AMVHTSGHAPAGELLYVLNATKPSNMMPVHGEWRHLRAHGALAEATGVPPDRVIIAEDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ L EI V G+ DG +G + + RR L G +++ V++D Sbjct: 429 MVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITVVVDAAAGK 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G D + + + + D + D L++ + + + Sbjct: 489 VVVGPDLSARGFS----DSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTVGRWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 545 NDRYRRRPMILPVVLEV 561 >gi|146341098|ref|YP_001206146.1| metallo-beta-lactamase family hydrolase [Bradyrhizobium sp. ORS278] gi|146193904|emb|CAL77921.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Bradyrhizobium sp. ORS278] Length = 556 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 240/555 (43%), Positives = 360/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL F PLGGVGEIGMN+++YG G+ R W+ ID GVSF ++ PG+DL+ PD++F Sbjct: 3 RPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAIDLGVSFGDEEHLPGIDLIMPDVSF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE KNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER+ KIP Sbjct: 63 LEKEGKNLVGLVLTHAHEDHFGAIIDLWPRLKCPIYATKFSAALFEAKCEAERLPAKIPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +VD+G F++E + V HSIPE+ AL I + VG ++HTGDWK+D +LG TD+ Sbjct: 123 KVIPSGGRVDIGPFNVEFIPVAHSIPESHALAIHTEVGTVLHTGDWKIDPTPVLGAPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+LAL+ DSTNA+REG SE + K+I ++K AKG V VTTF+S+V+RI Sbjct: 183 KRLRELGDAGLLALIGDSTNAVREGRSPSEAEVAKSIAKLVKEAKGRVAVTTFASNVARI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A + R++V++G +++RVV VA + G + Q F + +G +P ++++ + TG Sbjct: 243 RAVADAAREAEREVVIVGRAMERVVQVARETGYLDGVQNFRGMDLYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++ + V L + DTVIFSSR IPGNE A+G + N LV+QG+ +I + Sbjct: 303 SQGEPRAALARIANDDHPLVTLNKGDTVIFSSRTIPGNEKAVGAVINGLVQQGIEIITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W RPQ+L+ +HGE LHL H +LA G+ V RNG Sbjct: 363 -DHLVHVSGHPRRDELRDMIAWTRPQLLIPVHGEALHLNEHAKLARACGVPRVITCRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +++L P IIDE+ G KDG ++ + +RR++SF G + V + + + Sbjct: 422 LVKLGPGDPGIIDELPSGRLYKDGTILEDSKSRAVVERRKMSFAGCIFVAMAVTEKGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP G + ++ V++T LP+ RR+D ES+ A+RS + + Sbjct: 482 DDPEVDMVGIPEKTTAGEPMDDIVFDAVVSTFEGLPRARRRDPDAAAESVRRAVRSAVNE 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKP+ V + ++ Sbjct: 542 QWGKKPICLVHVLEV 556 >gi|290957002|ref|YP_003488184.1| lactamase-b family hydrolase [Streptomyces scabiei 87.22] gi|260646528|emb|CBG69625.1| putative lactamase-b family hydrolase [Streptomyces scabiei 87.22] Length = 568 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 170/554 (30%), Positives = 288/554 (51%), Gaps = 17/554 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD + I Sbjct: 27 RVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFSSIRDRLD 82 Query: 67 NLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + Sbjct: 83 DIEGIVLTHGHEDHIGAVPYLLREKPDIPLVGSKLTLALIEAKLQEHRIRPYTLEVV--E 140 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G++ +G F E V VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 141 GNRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFAR 200 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + EGI L+ DSTNA G E+ I + + A ++V +F+S + RI+ I+D Sbjct: 201 LSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFAGASKRIIVASFASHIHRIQQILD 260 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GR++ +G S+ R + +A D+G +K L + ++ P+ +++++ TGSQGE Sbjct: 261 AAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPQHEIVLVCTGSQGE 320 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 321 PMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NAK 378 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G ++ Sbjct: 379 VHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVVV 438 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 L +I +V G DG +G + + R+ L G +SV ++LD+ I G Sbjct: 439 DLIEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFLVLDSSTGKITG 498 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I G D G + + + + + Q + L++ I L + Sbjct: 499 GPHIQARGSGIEDSAFGAVVPRITEVLERS----AQDGVVEPHQLQQLIRRTLGKWVSDT 554 Query: 542 WGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 555 YRRRPMILPVVVEV 568 >gi|270307806|ref|YP_003329864.1| metallo-beta-lactamase [Dehalococcoides sp. VS] gi|270153698|gb|ACZ61536.1| metallo-beta-lactamase [Dehalococcoides sp. VS] Length = 551 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 176/559 (31%), Positives = 289/559 (51%), Gaps = 12/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L +PLGG+GEIG NM YG I+IDCG+ FP++++ G+DLV PDI++ Sbjct: 1 MAKPKLKIVPLGGLGEIGKNMMSVEYG----EDIILIDCGLMFPEEEMLGIDLVIPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R+ + I ITH HEDH GAL + ++VP+Y + GL+ K ++ + Sbjct: 57 VLENREKVRGIVITHGHEDHIGALPYILPQINVPIYCTKLTQGLISVKLKEAKLLHQTKI 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +G ++ V HS+P+++ LVI++P+G +VH+GD+KLD + G T+ Sbjct: 117 NVIPSDGTFKLGKLKVDFYPVCHSLPDSVGLVIQTPIGAVVHSGDFKLDYTPVDGKPTNL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+L LM DST+ G SE + +NI I+ A G VLVTTF+S +SR Sbjct: 177 SRLAMLGSRGVLLLMSDSTHVELPGYTPSETVVGENIDRIIGAATGRVLVTTFASLISRQ 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +ID A + GRK+ G S+ + +A ++G +K + L + + P E+++++ T Sbjct: 237 QQVIDAAAKYGRKLFFAGRSMTEIHKMAAELGYLKVPEGLVCNIDQLQRVPPEKVVLMTT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ + R+V + + DTVI S+ IPGNE + + L QG +V + Sbjct: 297 GSQGEPTSALVRIANRDFRHVHIMKGDTVIISASPIPGNESLVSRTIDSLFRQGAKVFYD 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHV GH +LK + ++P+ V +HGE HL H ELA G+ + Sbjct: 357 RI-AKVHVHGHASQEELKLVLNLVKPKYFVPVHGEYRHLTMHAELARTMGVAPENTFIME 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G +L L I +V G DG +G + + RR LS G + V ++ Sbjct: 416 DGDILELNTKSGRITGKVPSGNVYVDGLSVGDVGGVVLRNRRMLSQDGIVVAIVAINKQT 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G P+IV G D + + +I + + + + L Sbjct: 476 GMLVGRPDIVSRGFVDPD-ESKAMLDASRDLIIKLLDH--DGKDIPEGAMYNDVKETLNK 532 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P+V + K+ Sbjct: 533 FYYEQTKRRPMVIPVMVKV 551 >gi|288553246|ref|YP_003425181.1| putative RNAse J1 [Bacillus pseudofirmus OF4] gi|288544406|gb|ADC48289.1| putative RNAse J1 [Bacillus pseudofirmus OF4] Length = 555 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 164/559 (29%), Positives = 286/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN + LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD +F Sbjct: 4 MKNNQTAVFALGGLGEIGKNTYAVQF----QDEIILIDAGIKFPEDELLGIDYVIPDYSF 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++K + +FITH HEDH G + L +++P+Y A+GLL+ K + +K Sbjct: 60 LVKNEDKIKGLFITHGHEDHIGGIPYLLRAVNIPIYGGKLALGLLKGKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 V S+ R HSIP++ +V+++P GN+VHTGD+K D + + + Sbjct: 120 HEIHEDQVVKFTKTSVTFFRTTHSIPDSYGIVVKTPPGNVVHTGDFKFDFTPVG-EPANL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ +SE+ + ++I I + G V+ TF+S++ R+ Sbjct: 179 TKMAKIGEEGVLCLLSDSTNSEIPEFTMSERKVGESIDSIFRKVDGRVIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + + GRK+ + G S++ +++ ++G IK F+ P Q+ ++ T Sbjct: 239 QQVVEASVEHGRKVAVFGRSMENALTIGQELGYIKAPKNTFIEPSQLNKLPDNQVTILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N+L G VI Sbjct: 299 GSQGEPMAALSRIAFGTHRQIQIIPGDTVVFSSSPIPGNTLSVSKTINQLYRAGANVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++PQ + IHGE L H +LA G+ + Sbjct: 359 AL-SDIHTSGHGGQEEQKLMLRLMKPQYFMPIHGEYRMLKMHVKLATDCGVEEKNCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L + P+ I+ ++ DG IG ++ + RR LS G + V V LD Sbjct: 418 NGDVLAIHPNEAGIVGKIPSSSVYVDGNGIGDIGNIVLRDRRILSEEGLVVVVVSLDMKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G Y + + K + + ++ + ++ ++ L Sbjct: 478 FKVTAGPDIISRGF-VYMRESSDLIHEAQKLLSKHLDEVMARKTSQWSEIKNEMTDLLGP 536 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 537 FLYERTKRKPMILPIIMEV 555 >gi|315652508|ref|ZP_07905492.1| metallo-beta-lactamase [Eubacterium saburreum DSM 3986] gi|315485224|gb|EFU75622.1| metallo-beta-lactamase [Eubacterium saburreum DSM 3986] Length = 688 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 182/551 (33%), Positives = 289/551 (52%), Gaps = 14/551 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGG+ +IGMN+ + Y +++DCG++FP DD+ G+DLV PDIT++ + Sbjct: 146 PLGGLEQIGMNITAFEY----EDSIMVVDCGLAFPSDDMLGIDLVIPDITYLKDNYLKVK 201 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 ITH HEDH GAL + L+VPVY + L++ K ++ + GD V Sbjct: 202 GFCITHGHEDHIGALPYILKQLNVPVYGTKLTCALIDKKLKEHQIDDTAKLNVVKYGDVV 261 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 +G F +E V+ NHSI + AL I SP G + HTGD+K+D + GD D + IG + Sbjct: 262 KLGDFKVEFVKTNHSIADAAALAIHSPAGTVFHTGDFKVDYTPVFGDPADLGRMAEIGKQ 321 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDIAE 248 G LA++CDSTNA R G +SE+ + K I K ++V TF+S+V R++ II+ A Sbjct: 322 GCLAMLCDSTNATRPGFTMSERTVGKTFDMIFAEHKDSRIIVATFASNVDRVQQIINTAY 381 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + RK+V+ G S+ V+ A D+G I + + + YP+E+ ++I TGSQGE + Sbjct: 382 KYDRKVVVEGRSMVNVIGTAADLGYIDIPEGTLIDIDHLKDYPQEKTVIITTGSQGESMA 441 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 AL++++ R V+++ +D VI SS IPGNE A+ + N L +G VI + HV Sbjct: 442 ALSRMASSVHRKVEISTEDVVIMSSTPIPGNEKAVSKVINELSMKGAEVIFQ----DTHV 497 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLF 425 SGH ++K MY ++P+ + +HGE HL+A + LA GI V + +G ++ L Sbjct: 498 SGHACQEEIKLMYSLLKPKFALPVHGEYRHLMAGRGLAEAVGIPSENVLIMSSGDVVELS 557 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPE 484 + + V G DG +G ++ + R+ LS G + V + L++ + P+ Sbjct: 558 EYSCKTVGHVEAGGVFVDGLGVGDVGNIVLRDRQSLSQNGIIIVAMSLEHGTNRLLSGPD 617 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 IV G Y + + V V D R D ++ + +L L K + Sbjct: 618 IVSRGF-VYVRESTDLMNEASAVVREAVADCLHARITDWAKIKNVVRDSLSEFLWKRMKR 676 Query: 545 KPLVTVFINKI 555 P++ I ++ Sbjct: 677 NPVILPIIMEV 687 >gi|312139354|ref|YP_004006690.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi 103S] gi|325672766|ref|ZP_08152462.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi ATCC 33707] gi|311888693|emb|CBH48005.1| secreted metallo-beta-lactamase superfamily protein [Rhodococcus equi 103S] gi|325556643|gb|EGD26309.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi ATCC 33707] Length = 639 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 171/556 (30%), Positives = 288/556 (51%), Gaps = 16/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGG+GEIG NM ++ + K +++DCGV FP+D PGVDL+ PD +I Sbjct: 92 KNGLRVVALGGIGEIGRNMTVFEH----QGKLLIVDCGVLFPEDQQPGVDLILPDFRYIE 147 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ AI +TH HEDH GA+ L +P+ + F + L+ AK R+ + + Sbjct: 148 DRMDDVEAIILTHGHEDHIGAVPFLLRLRQDIPIVGAKFTLALVAAKCREHRLRPNLVEV 207 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GDK G F E VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD Sbjct: 208 V--EGDKTTHGPFECEYFAVNHSIPDAIAVAIRTSAGVVLHTGDIKLDQLPLDGRLTDLA 265 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G+EG+ + DSTNA G E+ I + +++ A V+V +F+S V RI+ Sbjct: 266 GFSRLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKATQRVIVASFASHVHRIQ 325 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D+A++ R++ +G S+ R + +A D+G + D L + ++ P ++L++I+TG Sbjct: 326 QVVDVAKRYNRRVAFVGRSMVRNMQIAQDLGYLSVPDGLVVDIDTAANLPDDKLVLISTG 385 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++RGE R + + D V+ +S IPGNE ++ + N L ++G V+ + Sbjct: 386 SQGEPLSALSRMARGEHRQINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQ 445 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 VHVSGH +L +Y +RP + +HGE HL A+ LA G+ + + Sbjct: 446 -NAKVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAEATGVPKDRIVLAED 504 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + EI+ V G DG +G ++ R L G +S++V +DN Sbjct: 505 GVVVDMVDGLAEIVGRVPVGHVYVDGNSVGDVGHSTLSDRLILGEGGFISISVAIDNETG 564 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 PE+ G D + + V + DL D + +++ + Sbjct: 565 RAVSEPEVSGRGFS----DDPQALSEAARLVDKVLGDLAAEGINDTHRIAQAVRRVVGRW 620 Query: 538 LKKVWGKKPLVTVFIN 553 + + + ++P++ + Sbjct: 621 VAEKYRRRPMIVPTVI 636 >gi|57234760|ref|YP_181182.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] gi|57225208|gb|AAW40265.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] Length = 551 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 177/559 (31%), Positives = 289/559 (51%), Gaps = 12/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L +PLGG+GEIG NM YG I+IDCG+ FP++++ G+DLV PDI++ Sbjct: 1 MAKPKLKIVPLGGLGEIGKNMMSVEYG----EDIILIDCGLMFPEEEMLGIDLVIPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R+ + I ITH HEDH GAL + ++VP+Y + GL+ K ++ + Sbjct: 57 VLENREKVRGIVITHGHEDHIGALPYILPQINVPIYCTKLTQGLISVKLKEAKLLHQTKI 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +G ++ V HS+P+++ LVI++P+G +VH+GD+KLD + G T+ Sbjct: 117 NVIPSDGTFKLGKLKVDFYPVCHSLPDSVGLVIQTPIGAVVHSGDFKLDYTPVDGKPTNL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+L LM DST+ G SE + +NI I+ A G VLVTTF+S +SR Sbjct: 177 SRLAMLGSRGVLLLMSDSTHVELPGYTPSETVVGENIDRIIGAATGRVLVTTFASLISRQ 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +ID A + GRK+ G S+ + +A D+G +K + L + + P E+++++ T Sbjct: 237 QQVIDAAAKYGRKLFFAGRSMTEIHKMAADLGYLKVPEGLVCNIDQLQRVPPEKVVLMTT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ + R+V + + DTVI S+ IPGNE + + L QG +V + Sbjct: 297 GSQGEPTSALVRIANRDFRHVHIMKGDTVIISASPIPGNESLVSRTIDSLFRQGAKVFYD 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHV GH +LK + ++P+ V +HGE HL H ELA G+ + Sbjct: 357 RI-AKVHVHGHASQEELKLVLNLVKPKYFVPVHGEYRHLTMHAELARTMGVAPENTFIME 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G +L L I +V G DG +G + + RR LS G + V ++ Sbjct: 416 DGDILELNTKSGRITGKVPSGNVYVDGLSVGDVGGVVLRNRRMLSQDGIVVAIVAINKQT 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G P+IV G D + + +I + + + + L Sbjct: 476 GMLVGRPDIVSRGFVDPD-ESKAMLDASRDLIIKLLDH--DGKDIPEGAMYNDVKETLNK 532 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P+V + K+ Sbjct: 533 FYYEQTKRRPMVIPVMVKV 551 >gi|146296218|ref|YP_001179989.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409794|gb|ABP66798.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 555 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 178/556 (32%), Positives = 309/556 (55%), Gaps = 9/556 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + +PLGG+ EIG NM + CG++FP+D++ G+DLV PD+++++ Sbjct: 6 EHRIRIIPLGGLNEIGKNMTVVEVDDEIVVID----CGLAFPEDEMLGIDLVIPDVSYLV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCI 121 K ++ + A+ +TH HEDH GA+ + L++P+Y + +GL+E K + + + Sbjct: 62 KNKEKVRALILTHGHEDHIGAIPYVLRDLNIPIYGTKLTLGLVEIKLMEFGIDLNSVKLF 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +AGD + +E +R HSI +++A+ + +P+G IVHTGD+K+D I G+ D Sbjct: 122 TVKAGDVISFNNMRVEFIRTTHSIADSVAIALHTPLGAIVHTGDFKVDFTPIEGEPIDLI 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+LAL+CDSTNA R G +SEK + I A+G V+V TFSS + R++ Sbjct: 182 RFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSHIHRVQ 241 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATG 300 +I+ AE+ GRKI +LG S+ VV+ A+++G + D + + + YP ++++I TG Sbjct: 242 QVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELENYPPNKIVLITTG 301 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++++ E + V + D VI S+ IPGNE + + N L +QG +VI ED Sbjct: 302 SQGEPMSALSRMASAEHKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFKQGAQVIYED 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + +HVSGH ++K ++ RP+ V +HGE HL+ H +LA++ G V + NGK Sbjct: 362 ID-DIHVSGHACQEEIKLIHNLTRPKYSVPVHGEFKHLIHHAKLAMELGEKNVFILENGK 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + D +++ V G L DG +G ++ + RR L+ G V + +D+ + Sbjct: 421 VLEITKDSAKVVGMVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDSSTRDV 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + + + K + + + + ++ + L++ L Sbjct: 481 IAGPEIISRGF-IYIKESEPLIEEAKKVIKDVLYFCRKNDITEPNAIKVILKDNLKNFLF 539 Query: 540 KVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 540 EKTRRNPMIIPIITEV 555 >gi|269925912|ref|YP_003322535.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789572|gb|ACZ41713.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 553 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 178/557 (31%), Positives = 298/557 (53%), Gaps = 11/557 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + +PLGGVGE+G NM YG + +++DCG++FP++D+ GVDL+ PDI +++K Sbjct: 3 DSVRVIPLGGVGEVGKNMLAVEYG----NEILLLDCGLAFPEEDMLGVDLLIPDIQYLLK 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 RK ++A I+H HEDH GAL + + P+YA+P GL+E K + + ++ Sbjct: 59 SRKRIVAYCISHGHEDHIGALPYILRDIDAPIYATPLTRGLIEVKLKEANLLQSARLRTY 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + GD V +G F++E V HSIP+ + L I PVG IV+TGD+K D + G + + Sbjct: 119 KDGDVVKIGKFTVEPFHVTHSIPDAVGLAITCPVGTIVYTGDFKFDPTPVDGKQANYGLI 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG G+L L+ D + +G SE+ + + AKG +++ TF+S ++R++ I Sbjct: 179 AQIGRRGVLTLLSDCVHVETKGHTPSEQVVGDTFRRVFAEAKGRIIIATFASLIARVQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQ 302 I++A + GRK+ ++G SL+ V++A ++G + D + ++ ++I TGSQ Sbjct: 239 INVAAEYGRKVAVVGRSLESNVAMARELGYLDPKDGTLVPLHQLRKEDADRSVLIVTGSQ 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP S L +++ + R+VK+ DTVI S+ IPGNE A+ I N L G VI + Sbjct: 299 GEPTSVLNRIANQDYRHVKIVPGDTVIISATPIPGNETAVSRIINNLFALGADVIYSAID 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +L+ M +RP+ +V +HGE HLV +K LA+ GI + NG Sbjct: 359 T-VHVSGHASSEELRLMLNLVRPKYVVPVHGEMRHLVMYKRLAMSVGIPEDHILIPENGA 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 ++ + I++ + + DG +G + + R+ LS G + V V +D +I Sbjct: 418 IMEFSKEQARIVEVYPNNMVYVDGISVGDVDHVVLRDRKLLSRDGMVIVVVGIDRNDGSI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF-RRKDLKLLRESISSALRSLL 538 P+I+ G Y G+ + + + V ++ + + I L L Sbjct: 478 LAGPDIISRGFL-YAGEDDNLLEEAKELVSNSIRHQEESPPPPEWSWAHRKIKDILGEFL 536 Query: 539 KKVWGKKPLVTVFINKI 555 K G++P++ + +I Sbjct: 537 YKRTGRRPMILPVVMEI 553 >gi|29829057|ref|NP_823691.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces avermitilis MA-4680] gi|29606163|dbj|BAC70226.1| putative hydrolase of the metallo-beta-lactamase superfamily [Streptomyces avermitilis MA-4680] Length = 561 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 289/555 (52%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ +G F E V VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGNRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + ++ A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRNVFAGARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPEHEIVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L +I +V G DG +G + + R+ L G +SV +++D + I Sbjct: 431 VDLVEGKAKITGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFLVVDASTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D G + + + + + Q + L++ I L + Sbjct: 491 GGPHIQARGSGIDDSAFGDVIPKIAEVLERS----AQDGVMEPHQLQQLIRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|254556976|ref|YP_003063393.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|254045903|gb|ACT62696.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] Length = 558 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 169/556 (30%), Positives = 277/556 (49%), Gaps = 10/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 7 KNNETAVFAVGGLGEIGKNT----YGIQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VP+YA P A+ L++ K + K Sbjct: 63 VANQQKIKALVITHGHEDHIGGIPFLLKQINVPIYAGPLALALIKGKLEEHGLLKTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + R HSIP+T+ + +++P G IV TGD+K D I + Sbjct: 123 EINEDTVLKFRKTRVSFFRTTHSIPDTLGIAVQTPPGTIVETGDYKFDLTPITNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G G+LALM DSTNA R SE+ + ++I I + +G ++ TF+S++SRI+ Sbjct: 183 KMAHLGERGVLALMSDSTNAERPIWTKSERWVAQSIRHIFEQVEGRIIFATFASNISRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +A + RKI + G S++ + ++G + D+ + P +++++ TG Sbjct: 243 EAAQVALEHHRKIAVFGRSMEAAIVNGRELGYLNIPDEAIVDANDLRSLPANKVMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQISIEPGDTVIFSSSPIPGNTLSVNHVINELEEAGANVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M Q ++P+ + IHGE L H ELA Q G+ + N Sbjct: 363 VN-NIHTSGHGGQEEQKLMLQLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFILEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L D + G DG IG ++ + R+ LS G + V ++ N Sbjct: 422 GDVLAFTKDSARVAGHFGAGDVYVDGSGIGDIGNVVLRDRQVLSEEGLVVVVATINLNKK 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + V T+ + + +R +I L+S Sbjct: 482 EIQAGPDILSRGF-VYMRESGDLINEARRHVFRTIRRKMKSDKATEATIRNAIIDDLQSF 540 Query: 538 LKKVWGKKPLVTVFIN 553 L + P++ + Sbjct: 541 LFDKTERHPMILPMLI 556 >gi|77918259|ref|YP_356074.1| metallo-beta-lactamase superfamily hydrolase [Pelobacter carbinolicus DSM 2380] gi|77544342|gb|ABA87904.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Pelobacter carbinolicus DSM 2380] Length = 564 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 187/556 (33%), Positives = 293/556 (52%), Gaps = 12/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + LPLGG+GEIG+NM + Y + ++IDCG+ FP+ +PG+DLV PDI+ + Sbjct: 15 EAVRILPLGGLGEIGLNMMVVEY----RDELLIIDCGLMFPEPHMPGIDLVIPDISCLED 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + +TH HEDH GA+ L L P VY SP +GLL + + + Sbjct: 71 HTHRIRGLVLTHGHEDHIGAVPFLLRKLGFPTVYGSPLTLGLLRHRLAEHDLLGLAELVE 130 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +++GAF +E RV HSI + + L IR+ +G IVHTGD+KLD + TD Sbjct: 131 VAPRQALELGAFHVELFRVTHSIVDGLGLAIRTHMGWIVHTGDFKLDQTPVDNQPTDLVR 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A G EG+L L+ DSTN ++G +SE+ + +IM A+G V+V TFSS++ RI+ Sbjct: 191 LAAYGEEGVLLLLSDSTNVEKKGFTLSEREVATAFGEIMPQARGLVVVATFSSNIHRIQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++ A GRK+V+ G S++ +A ++G +K D + + PR ++ ++ TGS Sbjct: 251 VVQAAVACGRKVVITGRSMEANTRIARELGYLKIPDDVLIDVRQARDLPRHRVAMLTTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP+S L ++SR E + + L + DTVI SS+ IPGNE AI + N L +G V E Sbjct: 311 QGEPQSCLVRMSRDEFKQLPLEKGDTVILSSKFIPGNEKAINRLINHLYRRGSEVFYE-T 369 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 VHVSGH +LK + +RP V IHGE HLV H ELA G+ C+ + +G Sbjct: 370 TSEVHVSGHASQGELKMVLSLVRPDYFVPIHGEYRHLVKHAELARGMGVAGECIEVLEDG 429 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 L + D + + G L DG +G + + RR ++ G + V + + + + Sbjct: 430 YPLCVSADGLVREPRLETGRVLVDGRGVGDVGHMELRDRRHVANHGLVVVMLTVSTSDGS 489 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I PE++ G A + + + + T+ ++ + + L + LR Sbjct: 490 ILYGPELLTRGFVA--EEETDLLEAARSQLWETLEEIAPETSGERETLEVEVRKCLRRFF 547 Query: 539 KKVWGKKPLVTVFINK 554 + ++PL+ I + Sbjct: 548 NRSVERRPLILPIILE 563 >gi|188580270|ref|YP_001923715.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179343768|gb|ACB79180.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 557 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 240/555 (43%), Positives = 354/555 (63%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITF 60 + +ELVF+PLGGVGEIGMN LYG G RKWIM+DCG+ F ++ LPG+DL+FPD+TF Sbjct: 4 RQDELVFVPLGGVGEIGMNAGLYGIGPEKQRKWIMVDCGMGFAGEEGLPGIDLMFPDLTF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ IFITHAHEDH GA+ +LW + PVYA+ FA LLE +R+ E + K+ Sbjct: 64 IEERKKDLLGIFITHAHEDHIGAISELWPRIKAPVYATRFAKNLLETRRLSEPGAPKVDL 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G +V VG F IE V V HSIPE+ A+ IR+ G ++HTGDWKLDD + GD T Sbjct: 124 REIKPGRRVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDSTSP 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ A+G+EGILAL+CDSTN +REG SE + + +++N V VTTF+S+V+RI Sbjct: 184 EAFTALGDEGILALVCDSTNVLREGRSPSETEVSATLRKLIENVPHRVAVTTFASNVARI 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + A+ GR+++ +G ++ RV+ VA + G + FLS +S+ PR++++ + TG Sbjct: 244 RAVAEAAQACGRQVIAVGRAMDRVIDVARECGYLDGLPDFLSADSYSHLPRDKVVCLLTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+A++++SR + + L D VIFSSRAIPGNE +G I N L+E G+ VI + Sbjct: 304 SQGEPRAAMSRVSRHDHPAISLTAGDRVIFSSRAIPGNERDVGAIINDLIEDGIEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY W RP+ +V +HGE LHL H A +G+ V RNG Sbjct: 364 TE-LVHVSGHPRREEMVAMYSWTRPKAVVPVHGEALHLDEHARFARSQGVESVVKARNGA 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P E+++ V G KDG ++ D I +RR+LS G +SV + +D + Sbjct: 423 VVRLAPGKPEVVEHVRAGRLYKDGNVLIDSKDRAIPERRKLSQTGIVSVALAIDERGEMA 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + +G+P G + ++ TV T+ L + + KD + + ++ A+RS + + Sbjct: 483 GEPAVDIMGLPNRGRGGEPLLDTVVDTVNRTINGLSRGKMKDSEAVENAVDRAVRSAVNE 542 Query: 541 VWGKKPLVTVFINKI 555 WGKKP V + ++ Sbjct: 543 AWGKKPACHVQVVEV 557 >gi|297156769|gb|ADI06481.1| metallo-beta-lactamase family hydrolase [Streptomyces bingchenggensis BCW-1] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 290/555 (52%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG NM ++ YG + +++DCGV FP+++ PGVDL+ PD T I Sbjct: 19 LRVIPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGVDLILPDFTCIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIDGIVLTHGHEDHIGGVPFLLREKSDIPLIGSKLTLALIEAKLQEHRIRPYTLEVE-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E V VNHSIP+ +A+ IR+P G VHTGD+K+D + G +TD + Sbjct: 133 EGQRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPLDGRLTDLPAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + +A+ ++V +F+S V RI+ I+ Sbjct: 193 KLGEEGIDLLLSDSTNAEVPGFVPPERDISGVLRQVFADAQRRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G ++ L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDDEIVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLSRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGVPKNRCVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + +I+ +V G DG +G + + RR L G +SV V++D+ I Sbjct: 431 VDMVDGVAKIVGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVFVVVDSTTGKIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G G ++ + ++ + +++ + ++ + Sbjct: 491 GGPHIQARG----SGIEDAAFSAVIPKIEESLAKSASDGVAEPHQIQQLVRRSVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 SYRRRPMILPVVVEV 561 >gi|329936620|ref|ZP_08286327.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045] gi|329303850|gb|EGG47733.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 285/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ Y + +++DCGV FP+++ PG+DL+ PD + I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEY----DGRLLIVDCGVLFPEEEQPGIDLILPDFSSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E V VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLADSTNAEVPGFTPHERDISNVLRQVFAGARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDHEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICRPRNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I +V G DG +G + + RR L G +SV V++D+ I Sbjct: 431 VDLLGGKAKISGKVQAGYVYVDGSSVGDVGEPALKDRRILGDEGIISVFVVMDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G D + + + T+ Q + +++ I L + Sbjct: 491 GGPHVQARGSGIEDSAFSAVLPKITE----TLERSAQDGVVEPHQMQQLIRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|269956030|ref|YP_003325819.1| beta-lactamase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304711|gb|ACZ30261.1| beta-lactamase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 167/554 (30%), Positives = 294/554 (53%), Gaps = 17/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GE+G NMA+ Y + ++IDCGV FP+D+ PGVDL+ PD +I Sbjct: 19 LRIVALGGLGEVGRNMAVLEY----DGRLLIIDCGVLFPEDNQPGVDLILPDFDYIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +P+ S + +EAK R+S + + Sbjct: 75 DDVEAVVLTHGHEDHIGAVPYLLRLRRDIPLLGSQLTLAFVEAKLKEHRISPVTLAV--K 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +G F +E V VNHSIP+ +A+ + +P G ++HTGD+K+D + G VTD + Sbjct: 133 EGQTEKLGPFDLEFVAVNHSIPDALAVAVTTPAGTVLHTGDFKMDQLPLDGRVTDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+ M DSTNA G E I + + A+ ++V +F+S V R++ ++ Sbjct: 193 RLGEKGVDLFMVDSTNAEVPGFVTPEVEIGPVLDSVFAQAEKRIIVASFASHVHRVQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A GR++ L+G S+ R +++A D+G ++ + + + + G P +Q++ ++TGSQG Sbjct: 253 NAAHSHGRRVALVGRSMVRNMAIAADLGYLRVPEGVLIDLKKTGDLPDDQIVYMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL+++S G+ V+++ DTVI +S IPGNE ++ + N L G RV+ Sbjct: 313 EPMAALSRMSNGDH-QVRISHGDTVILASSLIPGNENSVFRVINGLTRLGARVVHSG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +RP+ ++ +HGE HLVA+ LA++ G+ V +G + Sbjct: 371 KVHVSGHASAGELLYCYNILRPKNVMPVHGEVRHLVANGALAVKTGVPPERVVLAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V G DG +G+ + + RR L G +SV ++D+ + Sbjct: 431 IDLVDGKAAVVGAVPCGYVYVDGSSVGEITEAELKDRRILGEEGFVSVFAVVDSATGKVL 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G + + + ++ + D D L++ + + + + Sbjct: 491 AGPQILARG----MAEDAAVFDEIRPELVRALEDAITGGATDTYQLQQVMRRIVGQWVSR 546 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 547 RLRRRPMIVPIVVE 560 >gi|295395388|ref|ZP_06805587.1| metallo-beta-lactamase [Brevibacterium mcbrellneri ATCC 49030] gi|294971710|gb|EFG47586.1| metallo-beta-lactamase [Brevibacterium mcbrellneri ATCC 49030] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 289/555 (52%), Gaps = 17/555 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E L + LGG+GE+G NM ++ Y K ++IDCGV FP+++ PG+DL+ PD +++ Sbjct: 17 EALRIVALGGLGEVGRNMTVFEY----RGKILVIDCGVLFPEEEQPGIDLILPDFSYLDG 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +++ I +TH HEDH GA+ L L VP+ S + L+EAK R+ ++ Sbjct: 73 RADDVVGIVLTHGHEDHIGAVPYLLKKLGDVPILGSTLTLALVEAKLKEHRIRATTRIVA 132 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D+ +G F +E V VNHSIP+ +A+ +R+ G I+HTGD+K+D + G +TD S Sbjct: 133 EDDKDQ--LGPFDLEFVAVNHSIPDALAVCVRTGAGTILHTGDFKMDQLPLDGRITDLRS 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ + DSTNA G EK I + A+ ++V +F+S V R++ Sbjct: 191 FARLGEEGVDLFLTDSTNADVPGFTSMEKDIGAVLEAQFGRAERRIIVASFASHVHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A GRK+ L+G S+ R + +A ++G + + + + P +Q++++ TGS Sbjct: 251 VLEAASAHGRKVALVGRSMVRNMKIAQELGYLNVPPGVLIDIKHVDSLPDDQVVLMCTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ G R V + E D V+ +S IPGNE A+ + N L++ G VI + Sbjct: 311 QGEPMAALSRMANGSHR-VTVNEGDMVVLASSLIPGNETAVFRVINGLMKLGATVIHKG- 368 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH +L Y ++P+ ++ +HGE H++A+ +LA+ G+ V +G Sbjct: 369 NAKVHVSGHASAGELLYAYNIVKPRGVMPVHGEWRHMLANAKLAIDTGVPEDHVVVADDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L ++ V DG +G + + RR L+ G +S+ + +D Sbjct: 429 WVVDLKDGKARVVGAVDCDYVFVDGSSVGTVTESDLQDRRILAGEGFVSIFMTVDKSDKR 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P I G+ + ++ + + V D D L++ I + + Sbjct: 489 VLAGPVIHTRGVA----ESDRVFDTIKPKIEKAVADALDDGVVDEHKLQQIIRRTIGRWI 544 Query: 539 KKVWGKKPLVTVFIN 553 +KP++ + Sbjct: 545 SSKLRRKPMIVPMVV 559 >gi|328885441|emb|CCA58680.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Streptomyces venezuelae ATCC 10712] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 174/560 (31%), Positives = 290/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L +PLGG+GEIG NM ++ + + +++DCGV FP+++ PGVDL+ PD T Sbjct: 14 LPKGALRVIPLGGLGEIGRNMTVFEF----DGRLLIVDCGVLFPEEEQPGVDLILPDFTI 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGAVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + GD+ +GAF E + VNHSIP+ +A+ IR+P G V TGD+K+D + G +TD Sbjct: 130 EV--KEGDRETLGAFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G EK I + + NA+ ++V +F+S V R Sbjct: 188 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPEKDISNVLRTVFANAQKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G ++ L + ++ P ++++++ Sbjct: 248 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDDEVVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y RP+ L+ +HGE HL A+ EL GI + Sbjct: 367 KG-NAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGIPKDHIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L I +V G DG +G + + RR L G +SV V++D+ Sbjct: 426 EDGVVVDLVDGRARITGKVQAGYVYVDGLSVGDVTETSLKDRRILGEEGIISVFVVVDSS 485 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P + G D +L + + Q + L++ I ++ Sbjct: 486 TGKIVGGPHVHARGSGIDDAA----FDAVLPKIDQALNKSFQDGVVEPHQLQQLIRRSVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVSDTYRRRPMILPVVVEV 561 >gi|282866923|ref|ZP_06275955.1| beta-lactamase domain protein [Streptomyces sp. ACTE] gi|282558236|gb|EFB63806.1| beta-lactamase domain protein [Streptomyces sp. ACTE] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTTIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDVEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVE-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E + VNHSIP+ +A+ IR+P G V TGD+K+D + G +TD + Sbjct: 133 EGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGLAVATGDFKMDQLPLDGRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKTLDDLPDDEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L +I+ +V G DG +G + + RR L G +SV +++D + I Sbjct: 431 VDLIDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFIVVDSSSGKIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D G ++ K V + Q + L++ + + + Sbjct: 491 GGPHIQARG---SGIDDGAFTAVVPK-VEEALNKSAQDGVMEPHQLQQLVRRTVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|294631774|ref|ZP_06710334.1| metallo-beta-lactamase [Streptomyces sp. e14] gi|292835107|gb|EFF93456.1| metallo-beta-lactamase [Streptomyces sp. e14] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 284/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD + I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFSSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ VG F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGNRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLADSTNAEVPGFTPHERDISGVLRQVFGGARKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + + P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVRTLDDLPDHEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ E DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVEGDTVILASSLIPGNENAVYRVINGLTRWGADVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL--ALQEGIACVPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL + +G Sbjct: 371 KVHVSGHASAGELLYFYNICRPRNLMPVHGEWRHLRANAELGAMTGVPHDHIVIAEDGVT 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L +I +V G DG +G + + R+ L G +SV V++D+ + Sbjct: 431 VDLIEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFVVVDSTTGKVT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D G + + + ++ Q D L++ I L + Sbjct: 491 GGPHIQARGSGIEDSAFGAVIPKIRE----SLEKSAQEGIADSHQLQQLIRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|239991192|ref|ZP_04711856.1| metallo-beta-lactamase family hydrolase [Streptomyces roseosporus NRRL 11379] Length = 561 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 168/560 (30%), Positives = 287/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T Sbjct: 14 LPKGALRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTT 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + Q G + +G F E + VNHSIP+ +A+ IR+P G V TGD+K+D + G +TD Sbjct: 130 EV--QEGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V R Sbjct: 188 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G + L + ++ P ++++++ Sbjct: 248 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLNVPAGLVVDVKTLDDLPDDEVVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + Sbjct: 367 KG-NAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L +I+ +V G DG +G + + RR L G +SV +++D + Sbjct: 426 EDGVVVDLIDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFIVVDSS 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P I G D + + + + Q + L++ + + Sbjct: 486 SGKIVGGPHIQARGSGIDDNAFAGVTPKIQE----ALDKSAQDGVMEPHQLQQMVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVSDTYRRRPMILPVVVEV 561 >gi|300743990|ref|ZP_07073010.1| metallo-beta-lactamase family protein [Rothia dentocariosa M567] gi|300380351|gb|EFJ76914.1| metallo-beta-lactamase family protein [Rothia dentocariosa M567] Length = 567 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 170/559 (30%), Positives = 304/559 (54%), Gaps = 14/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+GE+G NM +Y + K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 7 LQKDTLRVVPLGGLGEVGRNMTVYEI----NGKLLIVDCGVLFPEESQPGVDLILPDFSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 63 VVDRLDDVVAMVLTHGHEDHIGAVPYLLKKRPDIPLIGSELTLALVEAKLAEHRIKPYTL 122 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 123 TV--KEHQIEKFGPFECEFIAVNHSIPDALAVFIRTAAGTVLHTGDFKMDQLPLDGRITD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+EG+ + DSTNA G +EK I I + ++A ++V +FSS V R Sbjct: 181 LRHFSRLGDEGVDLFLPDSTNAEVPGFTPTEKNIGPVISSVFRDAPSRIIVASFSSHVHR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+VL+G S+ R +++A +G +K + + + + Y ++L+++ Sbjct: 241 VQQVLDAAVERGRKVVLVGRSMVRNMTIAEKLGYLKVPEGVLVDLKKVDEYRPDELVLMC 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ + V+L DTV+ +S IPGNE ++ I N L++ GV V+ Sbjct: 301 TGSQGEPMAALSRMANGDHK-VQLEPGDTVVLASSLIPGNETSVYRIINALMKLGVTVVH 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + VHVSGH +L Y + P+ ++ +HGE HL+A+ ELA + G+ V Sbjct: 360 KG-NAKVHVSGHAAAGELLYCYNILEPKNVMPVHGEVRHLIANGELAKETGVPEEGVLLC 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L +I+ EV DG +G + + RR L G +S+ ++D Sbjct: 419 ESGTVVDLKDGVAKIVGEVPCEYLYVDGRSVGSVTEDDLKARRVLGEEGFVSIVTVIDRA 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+I GI D +I + + + P + ++ L++ + + Sbjct: 479 TKRVVTGPDIHARGIAEDDSVFDEITPKITAALEDALHRAP-EKVHTVQQLQQIVRRTIG 537 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + +KP++ + + Sbjct: 538 AWISRRLRRKPMIVPVVVE 556 >gi|182435568|ref|YP_001823287.1| metallo-beta-lactamase family hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776202|ref|ZP_08235467.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] gi|178464084|dbj|BAG18604.1| putative hydrolase of the metallo-beta-lactamase superfamily [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656535|gb|EGE41381.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] Length = 561 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 288/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T Sbjct: 14 LPKGALRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTT 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + Q G + +G F E + VNHSIP+ +A+ IR+P G V TGD+K+D + G +TD Sbjct: 130 EV--QEGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V R Sbjct: 188 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G +K L + ++ P ++++++ Sbjct: 248 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKTLDDLPDDEVVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + Sbjct: 367 KG-NAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L +I+ +V G DG +G + + RR L G +SV +++D + Sbjct: 426 EDGVVVDLIDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFIVVDSS 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P I G D + + + + Q + L++ + + Sbjct: 486 SGKIVGGPHIQARGSGIDDNAFAGVTPKIQE----ALDKSAQDGVMEPHQLQQMVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVSDTYRRRPMILPVVVEV 561 >gi|228477025|ref|ZP_04061663.1| ribonuclease J 1 [Streptococcus salivarius SK126] gi|322373731|ref|ZP_08048267.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] gi|228251044|gb|EEK10215.1| ribonuclease J 1 [Streptococcus salivarius SK126] gi|321278773|gb|EFX55842.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] Length = 560 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 278/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 7 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 63 IVENVDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAQL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 123 YEINANTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 182 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + +++G IK + Y +++++ T Sbjct: 242 QQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 302 GSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 362 KIN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAVDCGVPKDNIFIME 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 421 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFKS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 481 KMILAGPDILSRGF-IYMRESGDLIRESQRILFNAIRIALKNKDASIQSVNGAIVNALRP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 540 FLYEKTEREPIIIPMIL 556 >gi|163738818|ref|ZP_02146232.1| beta-lactamase-like protein [Phaeobacter gallaeciensis BS107] gi|161388146|gb|EDQ12501.1| beta-lactamase-like protein [Phaeobacter gallaeciensis BS107] Length = 555 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 203/556 (36%), Positives = 310/556 (55%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSTERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVTFPDMDSSPGVDLIMPDIR 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L +FITHAHEDH GA+ L+ L+VP+YA F L K + + Sbjct: 61 WLKERADQLEGVFITHAHEDHIGAVAHLYRDLNVPIYARAFTANLARRKMDEAGLDSEEV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F++ ++HSIPE+ LVI +P G IVHTGD+K D I+G+ D Sbjct: 121 KTVSAWPEVTKLGPFTVGVAPISHSIPESGGLVIDTPAGRIVHTGDFKTDPTPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + I +G+ AL+CDSTN SE + I ++ A+G V+ TTF+S+V+R Sbjct: 181 PEMWAEIAKDGVKALVCDSTNVFSLHPGRSEVEVGPEITRLVGEAEGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + GR +VLLG +++R+V A + G++K +S E+ PRE L+++ T Sbjct: 241 VKTLAEAGHAAGRSVVLLGRAMQRMVEAATETGVLKNFPKVVSVEAAQELPRENLMLVVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R V++ E D +FSS+ IPGNE + I N+ E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYRGVEVKEGDLFLFSSKTIPGNERGVIRIINQFSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+RM+ I+PQ+L+ +HGE HL H L +GIA NG Sbjct: 360 DSSGLYHVSGHANRPDLERMHDIIKPQMLIPMHGEHRHLRQHARLGEAKGIASA-VAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L D +++D V G DG + D + R +++ GH+ V V+LD Sbjct: 419 MMMDLTGDSPKVVDYVDTGRTYLDGSVKYGALDGVVRDRIRMALNGHVVVTVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+ + +++ + + ++ +D L E++ R + Sbjct: 479 LGEPWCDIKGLAETGRSNAALVEVMEEDLNQFIMRAGAKTLRDDDKLEENLRRVARQSAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 NEIGKKPEVTVVVSRM 554 >gi|228933720|ref|ZP_04096567.1| Ribonuclease J 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825953|gb|EEM71739.1| Ribonuclease J 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 555 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 159/560 (28%), Positives = 279/560 (49%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ + LGG+GEIG NM + Y + I++D G FP+ +L G+D V PD T+ Sbjct: 4 LQSGKTKIFALGGLGEIGKNMYVIEY----EDEIIIVDAGFKFPESELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +FITH HEDH G + L+ + VP+YA A L+++K + Sbjct: 60 LERNKDKIKGLFITHGHEDHIGGVPFLFKRIQVPIYAGKLAAALIKSKFEAHNIHHVEIR 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V+ + R HSIP+ +V+ +P GN+VHTGD+K D + + + Sbjct: 120 NILDETE-VEFQHTKVRFYRTTHSIPDAFGIVVTTPNGNVVHTGDFKFDFTPVGTE-ANL 177 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I EG+L L+ DSTN+ G +SEK + +++ +I A+G +L TF+S+V R+ Sbjct: 178 HKIAEIAKEGVLCLLSDSTNSEVPGFSMSEKKVGQSVKEIFSGAQGRILFATFASNVHRL 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + RK+V+LG S+++ + + D+G I+ + +F+ P Q+ +I T Sbjct: 238 QQVVETSILYNRKVVVLGRSMEKTIQIGRDLGYIQAPEDIFVGVHEINHIPSHQVTIICT 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +++ DTV+ SS IPGN +++ N L G VI Sbjct: 298 GSQGEPMAALSRIAYNNHRQIQIIPGDTVVLSSSPIPGNVLSVNRTINTLYRVGANVIHH 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVR 417 +H SGH + K M ++P+ + IHGE L H ELA++ + + Sbjct: 358 KI-SDIHTSGHGAQEEQKLMLSLLKPKYFMPIHGEYRMLKKHVELAIECGVPVENCFIMD 416 Query: 418 NGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++L I + + DG IG + + RR LS G + +++ LD Sbjct: 417 NGQILEFSKGEANISGKTIPSQAVYVDGSGIGDIGSIVLRDRRILSEEGIIIISLNLDCK 476 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P IV G Y + + + V V + +++S+ + L Sbjct: 477 QKRLVSQPAIVTRGF-VYMRESEVLMTKIENVVFECVTSVLNEGIVSWAQIKQSLVNVLG 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L G++P++ I ++ Sbjct: 536 PFLFSKIGRRPMILPIIMEV 555 >gi|163741471|ref|ZP_02148862.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] gi|161385205|gb|EDQ09583.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] Length = 555 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 201/556 (36%), Positives = 310/556 (55%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSTERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVTFPDMDSSPGVDLIMPDIR 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L +FITHAHEDH GA+ L+ L+VP+YA F L K + + Sbjct: 61 WLKERADQLEGVFITHAHEDHIGAVAHLYRDLNVPIYARAFTANLARRKMDEAGLDSEEV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F++ ++HSIPE+ LVI +P G IVHTGD+K D I+G+ D Sbjct: 121 KTVSAWPEVTKLGPFTVGVAPISHSIPESGGLVIDTPAGRIVHTGDFKTDPTPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + I +G+ AL+CDSTN SE + I ++ A+G V+ TTF+S+V+R Sbjct: 181 PEMWAEIAKDGVKALVCDSTNVFSLHPGRSEVEVGPEITRLVGEAEGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + GR +VLLG +++R+V A + G+++ +S E+ PRE L+++ T Sbjct: 241 VKTLAEAGHAAGRSVVLLGRAMQRMVEAATETGVLQNFPKVVSVEAAQELPRENLMLVVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R V++ E D +FSS+ IPGNE + I N+ E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYRGVEVKEGDLFLFSSKTIPGNERGVIRIINQFSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+RM+ I+PQ+L+ +HGE HL H L +GIA NG Sbjct: 360 DSSGLYHVSGHANRPDLERMHDIIKPQMLIPMHGEHRHLRQHARLGEAKGIASA-VAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L D +++D V G DG + D + R +++ G++ V V+LD Sbjct: 419 MMMDLTGDAPKVVDYVDTGRTYLDGSVKYGALDGVVRDRIRMALNGYVVVTVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+ + +++ + + ++ +D L E++ R + Sbjct: 479 LGEPWCDIKGLAETGTSNAALVEVMEEDLNQFIMRAGAKTLRDDDKLEENLRRVARQSAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 NEIGKKPEVTVVVSRM 554 >gi|297202786|ref|ZP_06920183.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sviceus ATCC 29083] gi|197716775|gb|EDY60809.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sviceus ATCC 29083] Length = 561 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD + + Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFSSVRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIEGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--A 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E V VNHSIP+ +A+ IR+P G +VHTGD+K+D + G +TD + Sbjct: 133 EGHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G EK I + + NA+ ++V +F+S + RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPEKDISNVLRQVFGNARKRIIVASFASHIHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDHEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I+ +V G DG +G + + R+ L G +SV +++D+ I Sbjct: 431 VDLVEGKAKIVGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFLVVDSSTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G G ++ V + Q + L++ + L + Sbjct: 491 GGPHIQARG----SGIEDSAFADVIPRVTEVLERSAQDGVVEPHQLQQLVRRTLGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMILPVVVEV 561 >gi|149182482|ref|ZP_01860956.1| hypothetical protein BSG1_21350 [Bacillus sp. SG-1] gi|148849813|gb|EDL63989.1| hypothetical protein BSG1_21350 [Bacillus sp. SG-1] Length = 555 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 160/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + +PLGGVGEIG NM + + +ID G+ FP+D++ G+D+V PDI ++ Sbjct: 5 KNESIKIIPLGGVGEIGKNMYVIE----VDEEIFVIDAGLMFPEDEMFGIDMVIPDIQYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + IF+TH HED GA+ + + PVY + L++ + E + I Sbjct: 61 VENKERVKGIFLTHGHEDAIGAITYVLRKIKAPVYGTKLTNALVKGRLKDEEFKEDIKFY 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + K+ G + R HSIP+++ + I + G+IVHTG++K D A D Sbjct: 121 NVHSDSKLYFGGVDVTFFRTTHSIPDSVGVSINTSEGSIVHTGEFKFDQAAKGLYRPDMG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+ G+L L+ DST A R G SE+ I + AK ++V +++S++ RI+ Sbjct: 181 KMAKIGDNGVLCLLSDSTEAERPGYTTSEEVIANQLNSAFHAAKHRIIVASYASNLIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D A + RK+ ++G SL+RV +A+++G ++ K+ + + + Y +++++IATG Sbjct: 241 QVFDAASKNNRKVAVVGKSLERVYEIALNLGYLQIKEDVIIPIQDISKYNDDEVVIIATG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP L ++++ + V + + DTV ++ G E+ + + L G V+ Sbjct: 301 DQGEPFEVLQRMAKQNHKLVNIQDGDTVFITATPSHGMELTMSKTVDMLYRSGANVLT-- 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 A VHVSGH DLK M ++P+ + I GE L+AH ++A GI+ V + Sbjct: 359 ANKKVHVSGHGSQEDLKLMLNLMKPKYFIPIQGEYRMLIAHSKIANSVGISHNRVFILDK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + +++ V G L DG +G ++ + R+ LS G V V L Sbjct: 419 GDVAQYKDGKMKMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLSRKGK 478 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PEI+ G Y + K+ + V V + +++ I L L Sbjct: 479 TLVSGPEIISRGF-VYVRESEKLMDESTQLVKQIVDGYLAKGTFEWSNIKQDIRDQLNHL 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L ++P++ I ++ Sbjct: 538 LFGRTRRRPMILPIIMEV 555 >gi|295689608|ref|YP_003593301.1| RNA-metabolising metallo-beta-lactamase [Caulobacter segnis ATCC 21756] gi|295431511|gb|ADG10683.1| RNA-metabolising metallo-beta-lactamase [Caulobacter segnis ATCC 21756] Length = 559 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 215/555 (38%), Positives = 332/555 (59%), Gaps = 1/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ELVFLPLGG EIGMN LYG+G RKWI++D GV+F PGV+++ PD FI Sbjct: 5 KDDELVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEIILPDPEFI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +++ I +THAHEDH GA+H LW L PV+A+PF LL K + ++P Sbjct: 65 EPYADDILGIVLTHAHEDHLGAVHWLWPRLKAPVFATPFTAFLLREKLRDASLLDEVPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G ++G FS+E + + HSIPE L I++P+G I+HTGDWK+D + LG TD Sbjct: 125 EIPLGGTFELGPFSLELITLTHSIPEPNGLAIKTPLGTILHTGDWKIDPEPQLGAPTDDA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L +G+EG+LA++CDSTN EGT SE +++ + +++K+ KG + V F+S+V+R+ Sbjct: 185 ALRRLGDEGVLAMVCDSTNVFVEGTAGSEADVREALGNLIKSLKGKIAVACFASNVARMD 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++I A+ GRK+ L G S+ R+ + A VG+++ + F++D+ P +++ + TGS Sbjct: 245 TVIRAAQACGRKVCLAGRSMHRMAAAARSVGLLEGIEPFINDDQAKHLPENEILFLCTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL++++ G +VKL D VIFSSR IPGNE+ I +++N+L ++GVR+ E Sbjct: 305 QGEARAALSRIADGSHPHVKLGAGDHVIFSSRVIPGNEIPIRNLQNKLADRGVRLHTERD 364 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP +L++MYQW+RP++ V HGE HL+ H A + RNG M Sbjct: 365 TPGIHVSGHPCREELRQMYQWVRPEIAVPTHGERRHLIEHAAFAKDLQVPQAVSPRNGDM 424 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P EIIDEV G DG ++ + +RR +F G L+V+++LD I Sbjct: 425 VRLAPGRAEIIDEVPAGRLYVDGGVVTPENGEALRERRHAAFNGMLAVSIVLDGRNKIVS 484 Query: 482 VPEIVDIGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ IG+ + L + T L R+ + + +IS A++ + Sbjct: 485 GPQVRGIGLTGDEEYSLDDALDDLAEEAETAYKRLDGDAREIDETIESAISRAVKKAAFR 544 Query: 541 VWGKKPLVTVFINKI 555 +W +KP+V + +I Sbjct: 545 IWERKPVVETTVLRI 559 >gi|289432329|ref|YP_003462202.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT] gi|288946049|gb|ADC73746.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT] Length = 551 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 178/559 (31%), Positives = 289/559 (51%), Gaps = 12/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L +PLGG+GEIG NM YG I+IDCG+ FP++++ G+DLV PDI++ Sbjct: 1 MAKPKLKIVPLGGLGEIGKNMMSVEYG----EDIILIDCGLMFPEEEMLGIDLVIPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R+ + I ITH HEDH GAL + ++VP+Y + GL+ K ++ + Sbjct: 57 VLENREKVRGIVITHGHEDHIGALPYILPQINVPIYCTKLTQGLISVKLKEAKLLHQTKI 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +G ++ V HS+P+++ LVI++P+G +VH+GD+KLD + G T+ Sbjct: 117 NVIPSDGTFKLGKLKVDFYPVCHSLPDSVGLVIQTPIGAVVHSGDFKLDYTPVDGKPTNL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+L LM DST+ G SE + +NI I+ A G VLVTTF+S +SR Sbjct: 177 SRLAMLGSRGVLLLMSDSTHVELPGYTPSETVVGENIDRIIGAATGRVLVTTFASLISRQ 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +ID A + GRK+ G S+ + +A D+G +K + L + E P E+++++ T Sbjct: 237 QQVIDAAAKYGRKLFFAGRSMTEIHKMATDLGYLKVPEGLVCNIEQLQRVPPEKVVLMTT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ + R+V + + DTVI S+ IPGNE + + L QG +V + Sbjct: 297 GSQGEPTSALVRIANRDFRHVHIMKGDTVIISASPIPGNESLVSRTIDSLFRQGAKVFYD 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHV GH +LK + ++P+ V +HGE HL H ELA G+ + Sbjct: 357 RI-AKVHVHGHASQEELKLVLNLVKPKYFVPVHGEYRHLTMHAELARTMGVAPENAFVME 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G +L L I +V G DG +G + + RR LS G + V ++ Sbjct: 416 DGDILELNTKSGRITGKVPSGNVYVDGLSVGDVGGVVLRNRRMLSQDGIVVAIVAINKQT 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G P+IV G D + + +I + + + + L Sbjct: 476 GMLVGRPDIVSRGFVDPD-ESKAMLDASRDLIIKLLDH--DGKDIPEGAMYNDVKETLNK 532 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P+V + K+ Sbjct: 533 FYYEQTKRRPMVIPVMVKV 551 >gi|28378771|ref|NP_785663.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|300768290|ref|ZP_07078195.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180964|ref|YP_003925092.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271608|emb|CAD64514.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|300494354|gb|EFK29517.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046455|gb|ADN98998.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 558 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 277/556 (49%), Gaps = 10/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V PD +++ Sbjct: 7 KNNETAVFAVGGLGEIGKNT----YGIQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + A+ ITH HEDH G + L ++VP+YA P A+ L++ K + K Sbjct: 63 VANQQKIKALVITHGHEDHIGGIPFLLKQINVPIYAGPLALALIKGKLEEHGLLKTTELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + R HSIP+T+ + +++P G IV TGD+K D I + Sbjct: 123 EINEDTVLKFRKTRVSFFRTTHSIPDTLGIAVQTPPGTIVETGDYKFDLTPITNQPPNLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G G+LALM DSTNA R SE+ + ++I I + +G ++ TF+S++SRI+ Sbjct: 183 KMAHLGERGVLALMSDSTNAERPIWTKSERWVAQSIRHIFEQVEGRIIFATFASNISRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +A + RKI + G S++ + ++G + D+ + P +++++ TG Sbjct: 243 EAAQVALEHHRKIAVFGRSMEAAIVNGRELGYLNIPDEAIVDANDLRSLPANKVMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQISIEPGDTVIFSSSPIPGNTLSVNHVINELEEAGANVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA Q G+ + N Sbjct: 363 VN-NIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFILEN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L D + G DG IG ++ + R+ LS G + V ++ N Sbjct: 422 GDVLAFTKDSARVAGHFGAGDVYVDGSGIGDIGNVVLRDRQVLSEEGLVVVVATINLNKK 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G + + V T+ + + +R +I L+S Sbjct: 482 EIQAGPDILSRGF-VYMRESGDLINEARRHVFRTIRRKMKSDKATEATIRNAIIDDLQSF 540 Query: 538 LKKVWGKKPLVTVFIN 553 L + P++ + Sbjct: 541 LFDKTERHPMILPMLI 556 >gi|184201236|ref|YP_001855443.1| hypothetical protein KRH_15900 [Kocuria rhizophila DC2201] gi|183581466|dbj|BAG29937.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 564 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 174/559 (31%), Positives = 299/559 (53%), Gaps = 15/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L +PLGG+GE+G NM ++ + + +++DCGV FP++ PGVDL+ PDI Sbjct: 15 LAKDTLRVVPLGGLGEVGRNMTVFEI----NGQLLVVDCGVLFPEETQPGVDLILPDINN 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++AI +TH HEDH GA+ L +PV S + L+EAK R+ Sbjct: 71 IRDRIDDIVAIVLTHGHEDHIGAVPYLLKRRPDIPVIGSQLTLALIEAKLQEHRIKPFTM 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G +G F E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 131 AV--REGQVERLGEFECEFVAVNHSIPDALAVFLRTKAGTVLHTGDFKMDQLPLDGRITD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G SEK I + D++ AK V+V +FSS V R Sbjct: 189 LRHFARLGEEGVDLFLTDSTNAEVPGFIPSEKAIGPVLADVVARAKQRVIVASFSSHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GRK+VL+G S+ R +++A +G + + + + G YP ++++++ Sbjct: 249 VQQVLDAAVASGRKVVLMGRSMIRNMAIAEKLGYLDVPPNVLVDQKKVGDYPDDKIVIMC 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ + V++ DTVI +S IPGNE ++ + N L+ G V+ Sbjct: 309 TGSQGEPMAALSRMANGDHK-VQVNAGDTVILASSLIPGNENSVFRVINGLMRLGANVVH 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P+ ++ +HGE HL+A+ ELA + G+ V Sbjct: 368 KG-NAKVHVSGHAGAGELLYCYNIVEPEYVMPVHGEIRHLIANGELARETGVPDDHVILA 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + ++I +V G DG +G+ D + R L G +SV +++ Sbjct: 427 ENGTVVDMHAGKVKITGQVECGFIYVDGSSVGEITDADLKDRMTLGEEGFISVVTVVNRD 486 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I G+ D +I + + + + + L++ + + Sbjct: 487 TGKIVSGPDIHARGVAEEDKVFNEIRPKIAAALEDALSESGKNHTS--HQLQQIVRRTVG 544 Query: 536 SLLKKVWGKKPLVTVFINK 554 S + + +KP++ + + Sbjct: 545 SWVSRRLRRKPMIVPVVVE 563 >gi|309812544|ref|ZP_07706292.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] gi|308433522|gb|EFP57406.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] Length = 560 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 292/558 (52%), Gaps = 18/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + LGG+GE+G NM + YG + ++IDCGV FP+D PGVDL+ PD + Sbjct: 14 LAKNGARVIALGGLGEVGRNMTVVEYG----GRLLIIDCGVLFPED-HPGVDLILPDFDY 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + ++ AI +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 69 LKDRLDDIEAIVLTHGHEDHIGAVPYLLRMKNDIPLIGSTLTLALIEAKLKEHRIRPYTM 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G +G F E V VNHSIP+ +A+ +R+P GN++ TGD+K+D + G +TD Sbjct: 129 AV--KEGQLEKIGPFDCEFVAVNHSIPDALAVFVRTPAGNLLCTGDFKMDQLPLDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ + DSTNA G EK I I + + A+ ++V FSS V R Sbjct: 187 LRAFARLGEEGVDLFLTDSTNAEVPGFTTPEKDITPAIERVFEKAERRIIVACFSSHVHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D AE GRK+ ++G S+ R +++A D+G +K D + + + P ++ ++I Sbjct: 247 VQQVLDAAEAHGRKVAMVGRSMVRNMTIAADLGYLKVPDNVLVDIKKLEQMPEDKQVLIC 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ + R + + E DT++ +S IPGNE A+ + N L+ G V+ Sbjct: 307 TGSQGEPMAALARMANRDHR-IDVGEGDTILMASSLIPGNENAVYGLINGLMRLGANVVH 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ IHGE HLVA+ +LA G+ V Sbjct: 366 KG-NAMVHVSGHASAGELLYCYNVVKPKNVMPIHGEWRHLVANGKLAAATGVPSDQVLLA 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG ++ L I V G DG L+G + + RR L G ++V V+ D Sbjct: 425 ENGVVVDLVNGKAAITGAVPVGYVYVDGSLVGTTDEDMLKDRRILRDEGFVTVIVVRDAK 484 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I G +G ++ + + +++ KD + L++ I A+ Sbjct: 485 TGAILAGPDIRTRGFA----EGDEVFDRVRPKIEQALLEARNKGVKDSRQLQQVIRRAVG 540 Query: 536 SLLKKVWGKKPLVTVFIN 553 + ++P++ + Sbjct: 541 GFVGGKLRRRPMIIPVVI 558 >gi|124515834|gb|EAY57343.1| Metallo-beta-lactamase family protein [Leptospirillum rubarum] Length = 562 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 190/558 (34%), Positives = 308/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIGMNM Y + +++DCGV FP+DDL G+DL+ PD+TF+ Sbjct: 11 SEPWVRIIPLGGIGEIGMNMTAYE----TPDGIVVVDCGVLFPEDDLLGIDLIIPDMTFL 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R L+A+F+TH HEDH GA+ VPV+ +P +GL+E K + + Sbjct: 67 KENRNRLLALFLTHGHEDHIGAIPYFLREFDVPVFGTPLTLGLVEGKVRQHKSLPPPRLV 126 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +K VG F+ E +R+ HSI + +A I + G I+HTGD+K+D I + D Sbjct: 127 SIRPREKYTVGPFTFEPIRITHSIADGVAFAITTEAGTILHTGDFKIDLTPIDNEHFDMH 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 LC++G EG+L L+ DSTN+ +EG +SE+ + + + ++ A G V+V TFSS++ R++ Sbjct: 187 RLCSLGEEGVLCLISDSTNSEKEGLSLSERQVTEPLEQMISQAPGRVIVATFSSNIHRLQ 246 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D++ + GRKI L G S++ VA ++G + + + YP E++ ++ TG Sbjct: 247 QVADVSIRNGRKIALTGRSMETNARVAGELGYLSIPPDQIIRLDQVSQYPPERVTILTTG 306 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ G+ ++V + DT++ S+R IPGNE AI I N L ++G +V Sbjct: 307 SQGEPMSALFRMALGDHKHVSIGPGDTILLSARIIPGNERAINKIINLLGKKGAKVFYRR 366 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH D K M + +RP+ V +HGE L H A++ GI V + N Sbjct: 367 I-SEIHVSGHASQEDQKLMIRMLRPKYFVPMHGEFRQLSQHARTAVRTGIPEENVFVIEN 425 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G +L L + ++VV G DG IG D+ I R++L G ++V V L Sbjct: 426 GVVLELTQSRVTQREKVVSGRTFIDGKGIGDVEDMVIRDRQRLGSDGIVTVIVALSQQTG 485 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PE+ G+ D ++ +L V + +L +K++ L+ + + LR Sbjct: 486 EIVVGPEVSTRGVVLSDLSLE-MNAILKTQVELLLQELGPEVKKEVSALKTLVHNHLRRY 544 Query: 538 LKKVWGKKPLVTVFINKI 555 KK + + P++ + ++ Sbjct: 545 FKKNFERDPVIIPVLLEM 562 >gi|269127515|ref|YP_003300885.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312473|gb|ACY98847.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 561 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 172/560 (30%), Positives = 293/560 (52%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L +PLGG+GEIG NM ++ +G + ++IDCGV FP+++ PGVDL+ PD + Sbjct: 14 LPENGLRIVPLGGLGEIGRNMTVFEFG----GRLLIIDCGVLFPEEEQPGVDLILPDFDY 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + A+ +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDQVEAVVLTHGHEDHIGGVPFLLRERADIPLVGSRLTLALIEAKLTEHRLRPVTI 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G++ G F +E + VNHSIP+ +A+ +R+P G ++HTGD+K+D + G +TD Sbjct: 130 GVT--EGERRSFGPFDLEFLAVNHSIPDALAVAVRTPAGLVLHTGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EGI LMCDSTNA G SE+ I I ++ + A ++V F+S + R Sbjct: 188 LGGFARLGAEGIDLLMCDSTNAEVPGFVTSEREIGPVIDEVFRTADERIIVACFASHIHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GRK+ +G S+ R + VA ++G +K + + + P ++L+++ Sbjct: 248 VQQVLDAAAANGRKVCFVGRSMVRNMGVAGELGYLKVPEGILIEQRQIDDVPPDRLVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ + +++ E+DTV+ +S IPGNE A+ + N L G RVI Sbjct: 308 TGSQGEPMSALSRMANRDH-QIRITERDTVMLASSLIPGNETAVNRVINGLTRWGARVIH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L + +P + IHGE HL A+ LA G+ + Sbjct: 367 KG-NALVHVSGHASAGELLYVLNLTKPSNFMPIHGEWRHLKANARLAALTGVPEENIVLA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L I V G DG +G+ + + RR L G +S+ V +D + Sbjct: 426 EDGVVVDLVDGRASITGAVPAGYVYVDGLSVGEITETSLKDRRILGEEGFVSIVVGVDAS 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI G D D + +++ + + + +L L + I + Sbjct: 486 TGKVVAGPEIHARGAGIADED----FEEVIERIEEVLQEAAAEGVNELHQLSQLIRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + + ++P++ + ++ Sbjct: 542 RWVNENYRRRPMIVPVVVEV 561 >gi|226310040|ref|YP_002769934.1| ribonuclease J 1 [Brevibacillus brevis NBRC 100599] gi|226092988|dbj|BAH41430.1| ribonuclease J 1 [Brevibacillus brevis NBRC 100599] Length = 556 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 169/556 (30%), Positives = 302/556 (54%), Gaps = 13/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +GG+GEIG NM Y + I+IDCGV FP++++ G+DLV PDI+++ Sbjct: 9 DVKIFAMGGLGEIGKNMYCVEY----EDEIIIIDCGVKFPENEMFGIDLVIPDISYLKDN 64 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + A+ +TH HEDH GA+ + + VP+Y +GL++AK R+ ++ I Sbjct: 65 QHKIKALLLTHGHEDHIGAIPYILRQIKVPIYGGRLTLGLVKAKLEEHRLQNEVKLIPIS 124 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++ R NHSIP+++ +V+ +P G ++HTGD+K D + T+ + Sbjct: 125 EDTEIPFAKLKATFFRTNHSIPDSLGVVLYTPEGMVIHTGDFKFDMTPVG-QTTEYGKIA 183 Query: 185 AIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG G +LAL+ DSTN+ R G +SE+ + + I D+++ A+G +++ TF+S+V R++ + Sbjct: 184 RIGASGDVLALLSDSTNSERPGFTMSERTVGEGILDVVRKARGRIILATFASNVHRLQQV 243 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQ 302 +D AEQ RK+ ++G S+++V + ++G I + + + + Y Q+++I TGSQ Sbjct: 244 VDAAEQCNRKVAVIGRSMEKVFLIGQELGYIQMPEGMLIDIKHIDNYADNQVLIICTGSQ 303 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL +++ G R V + +DTVI S+ IPGN + + ++L G V+ A Sbjct: 304 GEPMAALTRIASGSHRTVSIYPEDTVIISASPIPGNTINVSRTIDKLYRAGANVVLSHA- 362 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +H SGH +LK M +IRP+ + IHGE L H +LA Q GI + + NG+ Sbjct: 363 FDIHASGHGSSEELKLMLNFIRPKYFIPIHGEYRMLKTHSKLAQQVGIEESNIFIMDNGE 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + + +V G+ L DG +G ++ + R+ L+ G + V V LD ++ I Sbjct: 423 VLNCNREKA-WLSKVQAGIVLIDGSGVGDVGNIVLRDRKHLAEDGLMVVVVSLDMKNFKI 481 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y + + + V + + + K+ L+ I+ ++ + Sbjct: 482 LTGPDIVSRGF-VYVRGSESLIQEATQLVRGRLQEALDKKIKEWSELKSQINEVIKPFIY 540 Query: 540 KVWGKKPLVTVFINKI 555 + G+ P++ + ++ Sbjct: 541 EKTGRNPMILTILMEV 556 >gi|73748280|ref|YP_307519.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] gi|147669060|ref|YP_001213878.1| beta-lactamase domain-containing protein [Dehalococcoides sp. BAV1] gi|73659996|emb|CAI82603.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] gi|146270008|gb|ABQ17000.1| beta-lactamase domain protein [Dehalococcoides sp. BAV1] Length = 551 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 178/559 (31%), Positives = 288/559 (51%), Gaps = 12/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L +PLGG+GEIG NM YG I+IDCG+ FP++++ G+DLV PDI++ Sbjct: 1 MAKPKLKIVPLGGLGEIGKNMMSVEYG----EDIILIDCGLMFPEEEMLGIDLVIPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R+ + I ITH HEDH GAL + ++VP+Y + GL+ K ++ + Sbjct: 57 VLENREKVRGIVITHGHEDHIGALPYILPQINVPIYCTKLTQGLISVKLKEAKLLHQTKI 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +G ++ V HS+P+++ LVI++P+G +VH+GD+KLD + G T+ Sbjct: 117 NVIPSDGTFKLGKLKVDFYPVCHSLPDSVGLVIQTPIGAVVHSGDFKLDYTPVDGKPTNL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G G+L LM DST+ G SE + +NI I+ A G VLVTTF+S +SR Sbjct: 177 SRLAMLGARGVLLLMSDSTHVELPGYTPSETVVGENIDRIIGAATGRVLVTTFASLISRQ 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +ID A + GRK+ G S+ + +A D+G +K + L + E P E+++++ T Sbjct: 237 QQVIDAAAKYGRKLFFAGRSMTEIHKMATDLGYLKVPEGLVCNIEQLQRVPPEKVVLMTT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL +++ + R+V + + DTVI S+ IPGNE + + L QG +V + Sbjct: 297 GSQGEPTSALVRIANRDFRHVHIMKGDTVIISASPIPGNESLVSRTIDSLFRQGAKVFYD 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHV GH +LK + ++P+ V +HGE HL H ELA G+ + Sbjct: 357 RI-AKVHVHGHASQEELKLVLNLVKPKYFVPVHGEYRHLTMHAELARTMGVAPENAFVME 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G +L L I +V G DG +G + + RR LS G + V ++ Sbjct: 416 DGDILELNTKSGRITGKVPSGNVYVDGLSVGDVGGVVLRNRRMLSQDGIVVAIVAINKQT 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G P+IV G D + + +I + + + + L Sbjct: 476 GMLVGRPDIVSRGFVDPD-ESKAMLDASRDLIIKLLDH--DGKDIPEGAMYNDVKETLNK 532 Query: 537 LLKKVWGKKPLVTVFINKI 555 + ++P+V + K+ Sbjct: 533 FYYEQTKRRPMVIPVMVKV 551 >gi|254466982|ref|ZP_05080393.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium Y4I] gi|206687890|gb|EDZ48372.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium Y4I] Length = 555 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 200/556 (35%), Positives = 310/556 (55%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG + +++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGPKDKERLVLVDLGVTFPDMDTTPGVDLIMPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L IFITH HEDH GA+ ++ L+VPVYA F L K Sbjct: 61 WLKERTDRLEGIFITHGHEDHIGAIAHMYGHLNVPVYARAFTANLARRKMEEAGHDPANV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F+I ++HSIPE+ LVI SP G +VHTGD+KLD + ++G+ D Sbjct: 121 HTVQAWPEVTRLGPFTIGVAPMSHSIPESGGLVIDSPAGRVVHTGDFKLDANPLVGEPFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + I +GI AL+CDSTN + SE + + I + AKG V TTF+S+V+R Sbjct: 181 PEMWAQIAGDGIQALVCDSTNVFSQHPGRSESELPEEITRLFAEAKGLVAATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ AE+ GR +VLLG +++R++ A++ G++ +S E PR+ L++I T Sbjct: 241 VKTLAVAAEKAGRSVVLLGRAMRRMIEAAVETGVLTDFPKTISPEDAVNVPRDNLMLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R ++L E D +FSS+ IPGNE + I N+ E GV V+ + Sbjct: 301 GSQGERRAATAQLARGKYRGLELKEGDLFLFSSKTIPGNEKGVIRIINQFSEMGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ +++ ++P++L+ +HGE HL H L ++GIA V NG Sbjct: 360 DSSGLYHVSGHANRPDLEEVHRLLKPKMLIPMHGEHRHLRQHARLGEEKGIASAVVV-NG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L D ++ + + G DG + D + R +++ GH+ V V+LD Sbjct: 419 MMMDLTGDVPKVTEWIETGRTYLDGTVKYGAMDGIVRDRIRMALNGHVLVTVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+P + +++ + + ++ +D L + + R Sbjct: 479 LGEPWCDVKGLPETGTSNAALVEVMEEDLNQFLMRAGAKTLRDDDKLEQELRRIARQSAF 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 SEIGKKPEVTVVVSRM 554 >gi|312863312|ref|ZP_07723550.1| ribonuclease J 1 [Streptococcus vestibularis F0396] gi|322516007|ref|ZP_08068945.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] gi|311100848|gb|EFQ59053.1| ribonuclease J 1 [Streptococcus vestibularis F0396] gi|322125542|gb|EFX96883.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] Length = 560 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 278/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 7 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 63 IVENVDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAQL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 123 YEINANTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 182 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + +++G IK + Y +++++ T Sbjct: 242 QQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHSSEILIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 302 GSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 362 KIN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAVDCGVPKDNIFIME 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 421 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFKS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 481 KMILAGPDILSRGF-IYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 540 FLYEKTEREPIIIPMIL 556 >gi|86749707|ref|YP_486203.1| Beta-lactamase-like protein [Rhodopseudomonas palustris HaA2] gi|86572735|gb|ABD07292.1| Beta-lactamase-like protein [Rhodopseudomonas palustris HaA2] Length = 556 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 242/555 (43%), Positives = 360/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + ++LVF PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PDI F Sbjct: 3 RPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE+KNL+ I +THAHEDH+GA+ DLW L P+YA+ F+ L AK ER + KIP Sbjct: 63 LEKEKKNLVGIVLTHAHEDHFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKIPI 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G ++D+G F++E + V HSIPE+ AL IR+ G ++HTGDWK+D ++G TD+ Sbjct: 123 TVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAGLVLHTGDWKIDPTPVVGPPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + ++ ++K AKG V VTTF+S+V R+ Sbjct: 183 KRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVGRM 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A+ GR++VL+G ++ RV VA + G Q F E +G +P ++++ + TG Sbjct: 243 RAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++R + +V L + D VIFSSR IPGNE A+G I N LV QG+ VI + Sbjct: 303 SQGEPRAALARIARDDHPDVTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP +L+ + W+RPQ+L+ +HGE LHL H +LA Q G+ V RNG Sbjct: 363 -DHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVLTCRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P IID++ G KDG ++ + +A+RR+++F G V + L + Sbjct: 422 LIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEMV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ IG+P + G + ++ V+ TV LP+ RR+D + ES+ +RS ++ Sbjct: 482 DDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQA 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL V + K+ Sbjct: 542 EWGKKPLCFVHVLKV 556 >gi|212639506|ref|YP_002316026.1| mRNA degradation ribonucleases J1/J2 [Anoxybacillus flavithermus WK1] gi|212560986|gb|ACJ34041.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Anoxybacillus flavithermus WK1] Length = 560 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 163/560 (29%), Positives = 294/560 (52%), Gaps = 12/560 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK E++ LGGVGE+G NM + ++D G+ FP+D++ G+D+V PDI+ Sbjct: 8 MKQAEKIRVFALGGVGEVGKNMYVVE----VDEDIFVLDAGLMFPEDEMFGIDMVIPDIS 63 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++++++ + IF+TH H+DH GA+ + + VPVY + + L+E K + ++ K Sbjct: 64 YLVEQQERIRGIFLTHGHDDHIGAIAYVLRKITVPVYGAKLTLALMEEKLKEQGITSKAK 123 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I A ++ + + NHSIP+ + + I++ G IV+T D+K D + TD Sbjct: 124 RIEIHADSEIVFDKAVVSFFQTNHSIPDCLGVSIQTSQGAIVYTSDFKFDQTPVGICRTD 183 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + IG +G+L L+ DSTNA + G SE + + I D++ NA+G V+V F+S+++R Sbjct: 184 FGKMAQIGAQGVLCLLSDSTNAEKPGYTGSEAIVGQEISDVIYNAQGRVIVACFASNITR 243 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ ++ A RK++++ + +V+ +A+ +G +K + + +S Y L+++ Sbjct: 244 IQQVLHAARDHRRKVIIMSRHMHKVIDIAVRLGYLKLDENMIISMGEVDRYNDRDLVILT 303 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +ALA++++ + + + E DTVI +S +PG+E+ I + L G V+ Sbjct: 304 TGNQGEPMAALARMAKQAHKYINIKEGDTVIVASSPMPGHELFIARTIDALYRAGANVVY 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + VHVSGH Y +LK M +++P+ + +HGE AH ++A GI + + Sbjct: 364 GQRQ--VHVSGHGYQEELKLMINFMKPKYFIPVHGEFRMQKAHGKIAQAVGIRQDAIFLI 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G+++ +V G L DG IG ++ + RR LS G + V V L Sbjct: 422 EKGEVIEFRNGHARFGGKVPSGQILIDGLGIGDVGNIVLRDRRLLSQDGIMIVVVTLSKQ 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PE++ G Y + + + +K V V + + L+ +I AL Sbjct: 482 EKRVVAGPEMISRGF-VYVRESETLFEESVKIVKEIVEKSMEDYVIEWSSLKTNIRDALS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 541 QYLFEQTKRKPMILPIIMEV 560 >gi|307331551|ref|ZP_07610663.1| RNA-metabolising metallo-beta-lactamase [Streptomyces violaceusniger Tu 4113] gi|306882822|gb|EFN13896.1| RNA-metabolising metallo-beta-lactamase [Streptomyces violaceusniger Tu 4113] Length = 561 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 289/555 (52%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PGVDL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGVDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 75 DDIDGIVLTHGHEDHIGGVPFLLREKADIPLIGSKLTLALIEAKLQEHRIRPYTLEVEEG 134 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +++ G F E + VNHSIP+ +A+ IR+P G VHTGD+K+D + G +TD + Sbjct: 135 HRERI--GPFECEFIAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPLDGRLTDLPAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V RI+ I+ Sbjct: 193 KLGEEGIDLLLVDSTNAEVPGFVPPERDISGVLRQVFSNAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G ++ L + ++ P E+++++ TGSQG Sbjct: 253 DAAHEHGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPDEEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGATVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKNRCVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +I+ +V G DG +G + + RR L G +S+ V++D+ + Sbjct: 431 VDLVDGIAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGEEGIISIFVVVDSSTGKVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D + + ++ + D D L++ A+ + Sbjct: 491 GGPHIHARGSGIEDSAFTAVIPKIEDAMVKSASD----GVVDAHQLQQLARRAVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 SYRRRPMILPVVVEV 561 >gi|62289766|ref|YP_221559.1| metallo-beta-lactamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82699694|ref|YP_414268.1| beta-lactamase-like protein [Brucella melitensis biovar Abortus 2308] gi|189024011|ref|YP_001934779.1| Beta-lactamase-like protein [Brucella abortus S19] gi|237815253|ref|ZP_04594251.1| metallo-beta-lactamase family protein [Brucella abortus str. 2308 A] gi|254689073|ref|ZP_05152327.1| Beta-lactamase-like protein [Brucella abortus bv. 6 str. 870] gi|254693556|ref|ZP_05155384.1| Beta-lactamase-like protein [Brucella abortus bv. 3 str. Tulya] gi|254697207|ref|ZP_05159035.1| Beta-lactamase-like protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730103|ref|ZP_05188681.1| Beta-lactamase-like protein [Brucella abortus bv. 4 str. 292] gi|256257322|ref|ZP_05462858.1| Beta-lactamase-like protein [Brucella abortus bv. 9 str. C68] gi|260545484|ref|ZP_05821225.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260754571|ref|ZP_05866919.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260757792|ref|ZP_05870140.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761617|ref|ZP_05873960.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883598|ref|ZP_05895212.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261213821|ref|ZP_05928102.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297248171|ref|ZP_06931889.1| beta-lactamase-like protein [Brucella abortus bv. 5 str. B3196] gi|62195898|gb|AAX74198.1| metallo-beta-lactamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82615795|emb|CAJ10793.1| Beta-lactamase-like [Brucella melitensis biovar Abortus 2308] gi|189019583|gb|ACD72305.1| Beta-lactamase-like protein [Brucella abortus S19] gi|237790090|gb|EEP64300.1| metallo-beta-lactamase family protein [Brucella abortus str. 2308 A] gi|260096891|gb|EEW80766.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260668110|gb|EEX55050.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672049|gb|EEX58870.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674679|gb|EEX61500.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873126|gb|EEX80195.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915428|gb|EEX82289.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297175340|gb|EFH34687.1| beta-lactamase-like protein [Brucella abortus bv. 5 str. B3196] Length = 558 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 280/554 (50%), Positives = 396/554 (71%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A+YG+G +R+W+++D GVSF + PG DL+ PDI ++ Sbjct: 5 NTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPDIRYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ NL I ITHAHEDH+GAL DLW L VPVYA+PF GLLEAKR E + +IP Sbjct: 65 EAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPEIPIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++AG+ +VG F IE+V V HSIPE ++L I +P+G +VHTGDWK+D + LG V D+ Sbjct: 125 IYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 AIG G+LAL+CDSTNA+REG SE+ + +++ ++++NA+G V +TTFSS+V RIR Sbjct: 185 RFRAIGEAGVLALICDSTNALREGESPSERQVDESLRELIQNARGRVAITTFSSNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A GR+++++G S+KR +SVA ++G ++ +LS+E +G PRE +++I TGS Sbjct: 245 SITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMILTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+L+R EMR++ L DTVI+SSRAIPGNE AI IKNRL+++G+++I ++ Sbjct: 305 QGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKIIGDE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L+RMY W+RPQ+LV +HGE HLVA L EGI + VR+G M Sbjct: 364 DALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRDGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P EIIDE G KDG LIG ++G+ +RR+L++VGH++V+VLLD + + Sbjct: 424 LRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHKMLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++V G+P D G + +LL I + +P+ RRKD++ +RES+ A+R+ + Sbjct: 484 EPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAANEA 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+VTVF+N+I Sbjct: 544 WGKKPVVTVFVNRI 557 >gi|257080703|ref|ZP_05575064.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|256988733|gb|EEU76035.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] Length = 561 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 162/557 (29%), Positives = 270/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 61 IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +I R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HRMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + RKI + G S++ + +G IK F+ P + +++ T Sbjct: 240 QQAADAAVKTDRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMG 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG +G ++ + RR LS G + +D + Sbjct: 419 NGDVLALTADSARPAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + L E++++AL+ Sbjct: 479 KEIMAGPDILSRGF-VYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEQTERHPMILPMIM 554 >gi|253583203|ref|ZP_04860401.1| metal-dependent hydrolase [Fusobacterium varium ATCC 27725] gi|251833775|gb|EES62338.1| metal-dependent hydrolase [Fusobacterium varium ATCC 27725] Length = 628 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 169/563 (30%), Positives = 298/563 (52%), Gaps = 14/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E++ +PLGG+ E+G NM + Y + I+ID GV+FP D+L G+DLV PD +F Sbjct: 72 IKEEKMYVIPLGGLEEVGKNMTVIQY----RDEIIIIDSGVTFPDDNLLGIDLVIPDFSF 127 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK- 117 I + + +FITH HEDH G++ L+ + ++P++ + L ++K SK+ Sbjct: 128 IENNKDKVKGLFITHGHEDHIGSIPYLYQKIDKNIPMFGGKLTLALAKSKFDNPGFSKEL 187 Query: 118 IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + +V VG F++E ++V HSI + +LVI SP G + HTGD+K+D + + Sbjct: 188 PKMKEVKGRSRVKVGKYFTVEFIKVTHSITDAYSLVITSPAGVVFHTGDFKIDLTPVDSE 247 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D L IG +G+ ++ DSTN+ EG SE+ + + AKG ++V F+S Sbjct: 248 GVDFARLSQIGEQGVDLMLSDSTNSEVEGFTPSERSVGEAFKQEFSKAKGRIIVAAFASH 307 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 V R++ II+ AE+ GR+I + G SL +V +A ++G ++ + + ++ +++ Sbjct: 308 VHRLQQIINTAEEYGRRIAIDGRSLVKVFEIASNLGYLRIPEGMMVALSEVDGLRDNKVV 367 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A+ + N L++ Sbjct: 368 ILCTGTQGEPMAALSRIAKNMHKHIKIKEGDTVIISATPIPGNEKAVSNNINNLLKYDAE 427 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 V+ + +HVSGH ++ K M I+P+ + +HGE L AHK+ A++ G+ V Sbjct: 428 VVFKKI-AGIHVSGHGSKDEQKLMLNLIKPRYFMPVHGEHKMLKAHKDTAIETGVPKNNV 486 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +NG + + ++I +V G L DG +G ++ + R+QLS G + + + Sbjct: 487 IIAQNGSKVEVTKSAVKIKGKVNAGSTLVDGLGVGDIGNIVLKDRQQLSQDGVVVIVFTI 546 Query: 474 DNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 I P+IV G Y + I K ++ + + ++ KD + + Sbjct: 547 SKETGKIIAGPDIVTRGF-VYSKESDDIIKEAIEAIKAKLSNIEGHSTKDWNTFKNTTRD 605 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 + P+V I +I Sbjct: 606 IASKYFYNKTKRNPVVLPIIMEI 628 >gi|239944728|ref|ZP_04696665.1| metallo-beta-lactamase family hydrolase [Streptomyces roseosporus NRRL 15998] gi|291448186|ref|ZP_06587576.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351133|gb|EFE78037.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 561 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 286/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD T Sbjct: 14 LPKGALRVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFTT 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + L+EAK R+ Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQEHRIRPYTL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + Q G + +G F E + VNHSIP+ + + IR+P G V TGD+K+D + G +TD Sbjct: 130 EV--QEGQRERIGVFDCEFIAVNHSIPDALVVAIRTPAGMAVATGDFKMDQLPLDGRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EGI L+ DSTNA G E+ I + + NA+ ++V +F+S V R Sbjct: 188 LHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVASFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ I+D A + GR++ +G S+ R + +A D+G + L + ++ P ++++++ Sbjct: 248 IQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLNVPAGLVVDVKTLDDLPDDEVVLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + Sbjct: 367 KG-NAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKDHIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L +I+ +V G DG +G + + RR L G +SV +++D + Sbjct: 426 EDGVVVDLIDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFIVVDSS 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G P I G D + + + + Q + L++ + + Sbjct: 486 SGKIVGGPHIQARGSGIDDNAFAGVTPKIQE----ALDKSAQDGVMEPHQLQQMVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 542 KWVSDTYRRRPMILPVVVEV 561 >gi|259419345|ref|ZP_05743262.1| metallo-beta-lactamase family protein [Silicibacter sp. TrichCH4B] gi|259345567|gb|EEW57421.1| metallo-beta-lactamase family protein [Silicibacter sp. TrichCH4B] Length = 555 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 204/556 (36%), Positives = 314/556 (56%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG+P + I++D GV+FP D PGVDL+ PDI+ Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGAPGKERLILVDLGVAFPDMDTTPGVDLIMPDIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L IFITHAHEDH GA+ L+S L+VPVYA F + K + Sbjct: 61 WLAERADQLEGIFITHAHEDHIGAVAHLYSRLNVPVYARAFTANIARRKMEEQGHDPDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F+I +V ++HSIPE+ LVI SP G ++HTGD+KLD + I+G+ D Sbjct: 121 VTISPWPEVTKLGPFTIGAVPISHSIPESGGLVIDSPAGRVIHTGDFKLDANPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D I +G+ AL+CDSTN SE + NI ++ A G V TTF+S+V+R Sbjct: 181 PDLWAEISKDGVQALVCDSTNVFSPHAGRSESDLGDNITKLISEASGMVAATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ E+ GR IVLLG +++R++ +I+ G++ + E PRE L++I T Sbjct: 241 VKTLAQAGERAGRSIVLLGRAMRRMIEASIETGVLSDFPKVVQPEEAADIPRENLMLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R ++L E D +FSS+ IPGNE + I N+ E+GV V+ + Sbjct: 301 GSQGERRAATAQLARGKYRGMELKEGDLFLFSSKTIPGNEKGVIWIINQFSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL++M+ ++P++L+ +HGE HL H L +GIA NG Sbjct: 360 DSSGLYHVSGHANRPDLEQMHDIVKPKILIPMHGEHRHLRQHARLGEDKGIASA-IAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L D ++ D + G DG + D + R +++ GH+ V +LD Sbjct: 419 MMMDLTGDTPKVADYIDTGRTYLDGSVKIGAMDGIVRDRIRMALNGHVVVTAILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + G+ + +++ + + ++ + KD L + + R + Sbjct: 479 LGEPWVDLKGLAETGQSNAALAEVMEEDLNQFLMRAGKKTLKDDDKLEQELKRIARQTAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 SEIGKKPEVTVVVSRM 554 >gi|288572942|ref|ZP_06391299.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568683|gb|EFC90240.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 601 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 189/560 (33%), Positives = 292/560 (52%), Gaps = 10/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L F+PLGG+GEIG NM L +G I+IDCG+ FP++++ G+D V PD T++ Sbjct: 48 KDGTLRFIPLGGIGEIGKNMYLLEFG----EDMIVIDCGLMFPEEEMLGIDFVIPDTTYL 103 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + I +TH HEDH GAL + L VPVY + +G+ + R K Sbjct: 104 EANKDRVKGILLTHGHEDHVGALPFVLPGLDVPVYGTKLTLGMASHRLGEARPDYKPKFK 163 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGDKV +G FS+ + V HSIP+ +AL + +P+G ++HTGD+KLD + G +TD Sbjct: 164 EIKAGDKVKLGCFSVSFIPVCHSIPDGVALAVETPIGTVIHTGDFKLDPTPVDGRITDYS 223 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 + +G +G+LALM DSTN +EG SE I + + + + V++++FSS++ R+ Sbjct: 224 AFAELGKKGVLALMSDSTNVEKEGFTQSESVISGTLERLFREQRNRRVIISSFSSNLHRV 283 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + + D+A + RKI G S+ V +A +G ++ D + + + P +L+++ T Sbjct: 284 QQVADVAARFNRKIAFAGRSMINNVDLARRLGYLQISDDMMVPLQDIDKVPHNRLVLVTT 343 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP S L +S+GE VKL KD V + +PGNE + ++ NRL VI E Sbjct: 344 GSQGEPFSGLMLMSKGEHHRVKLGPKDVVAVFATPVPGNEKMVSNMINRLFRCRCEVIYE 403 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVR 417 + HVSGH +LK M +RP+ V IHGE LV H +LA Q + + Sbjct: 404 KS-WGTHVSGHASREELKMMLSMVRPKYFVPIHGEYRMLVRHAQLANQMGVPVKNTFVMD 462 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L + + +V G L DG G+ + +R+ L+ G L V++ +D + Sbjct: 463 NGDVLSITDKSAQAKSKVQAGAVLVDGLAFGELESSVMRERKDLAEDGVLVVSMTVDRRF 522 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P G + D + K + TV R +++L I R L Sbjct: 523 KLLSDPMFESCGF-MHLHDAEHMRKEFSDAIRHTVKKASSQRGVTVEVLENKIRGRCRDL 581 Query: 538 LKKVWGKKPLVTVFINKISR 557 L+K G KP V I + R Sbjct: 582 LRKYAGTKPRVIPLITVLDR 601 >gi|94969119|ref|YP_591167.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94551169|gb|ABF41093.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 556 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 181/561 (32%), Positives = 293/561 (52%), Gaps = 11/561 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + +L +PLGG+GE GMN YG ++ID G+ FP+ +L GVD+V PDI++ Sbjct: 1 MPSGKLQVIPLGGLGEFGMNCMAVRYG----DDIVVIDAGMMFPEAELLGVDIVVPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R + AI +TH HEDH GAL + S L+VP+Y + F + +E K + Sbjct: 57 LVENRDKVRAILLTHGHEDHIGALPWILSELNVPIYGTEFTLAYVEGKLEEHGLLDDADL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + G + VG F+I +++V HS+ + +AL + +P+G I+HTGD+K+D + D Sbjct: 117 IEIRPGARFKVGIFTIHAMQVTHSLVDCVALAVHTPLGVIIHTGDFKVDPTPTDNRLFDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G E +LAL DSTN R G SE+ ++ +I A + ++ FSSS+ RI Sbjct: 177 HAFAEYGKENVLALFQDSTNVERRGYTPSERAVRARFAEIFHRAPRRLFLSCFSSSIHRI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 I+ A GRK+ L+G S+ V +A D+G I + F++ Y E++ V+ + Sbjct: 237 NLAIEAAYNNGRKVALVGRSMNESVEIAQDLGYIDMPEGAFITPGQIRDYAPEKVCVLIS 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP SAL++ + ++ K+ DTV+ SSR IPGNE +I + + L + VI + Sbjct: 297 GTQGEPMSALSRAAVDNHKHAKIEPNDTVVLSSRIIPGNEKSIYRVIDHLFRRNAHVIYD 356 Query: 360 D-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEG--IACVPPV 416 D + PVHVSGH +L+ + +RP+ + +HGE L H ELA + V + Sbjct: 357 DGSTPPVHVSGHASQEELRLIINLVRPRYFIPVHGEYRQLKLHAELAQAMRGAVGQVLMM 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLDN 475 +G +L +V G D +G+ DL I RR LS G + + ++ Sbjct: 417 ESGDVLEFDELGARKAGKVKVGRVCIDSGSMGEVVEDLVIRDRRHLSEDGFVLPIIAINK 476 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + VPEIV G A +G + +T++ T+ D +++E + L Sbjct: 477 LTGQVESVPEIVMRGF-APGSEGDAFVEKSRETIMKTLEASSPEEIADYGVIKEKVRQDL 535 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + K ++PL+ I +I Sbjct: 536 KRYIAKSTQRRPLIMPVILEI 556 >gi|322436584|ref|YP_004218796.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX9] gi|321164311|gb|ADW70016.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX9] Length = 554 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 185/561 (32%), Positives = 292/561 (52%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++L +PLGG+GE GMN I+ID G+ FP+++L GVD+V PDI++ Sbjct: 1 MAQDKLRLIPLGGLGEFGMNCMALR----WQDDIIVIDAGLMFPEEELLGVDIVVPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + AI +TH HEDH G L + S L+VPVY + F + L E K R+ Sbjct: 57 LTENRTKVKAIILTHGHEDHIGGLPWILSELNVPVYGTEFTLALAEGKLDEHRLLDDADL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G K +G F+I+ + V HS+ + +A+ I +PVG ++HTGD+K+D G D Sbjct: 117 IEMIPGKKFSIGPFTIQPIHVTHSLVDCVAVAIHTPVGVVLHTGDFKVDLSPPDGKAFDL 176 Query: 181 DSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G G+LAL+ DSTN R+G SE+ ++ + +I K + + FSSSV+R Sbjct: 177 QAFADLGKNGGVLALLQDSTNVDRKGWTPSERAVRPRLDEIFGQTKKKLFFSCFSSSVTR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I D+A + GRK+ ++G S+ +A D+G +K L ++ + E+L+V+ Sbjct: 237 IALAFDLAAKHGRKVAVIGRSMDNATEIAQDLGYLKVPQGLIINPGQMRDFAPEKLLVMI 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 +G+QGEP SAL++ + + K+ DTV+ SSR IPGNE I + + L + VI Sbjct: 297 SGTQGEPMSALSRAAVNNHKFAKIEAGDTVLMSSRVIPGNEKGIYRVIDHLERRDALVIH 356 Query: 359 ED-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP-V 416 +D +HVSGH +LK M ++P+ + +HG+ HL H ELAL G+ + Sbjct: 357 DDGTNGLIHVSGHGSQEELKLMINLVQPKFFIPVHGDYRHLKRHVELALSTGVPQKAILM 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLDN 475 +G++L L D + +V G D D+ I R+ LS G + V +D Sbjct: 417 EDGEILELTKDTAQKNGKVTTGRVCIDSGGTIDVVEDVVIRDRQHLSEDGIVIAIVAIDK 476 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 GVPEIV G D ++ V T+ R+D +++E I L Sbjct: 477 RTGQSEGVPEIVMRGFAM---DDAQLIGESRAIVKRTLEGSSAEERQDYGVIKEKIRGDL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + ++K ++PL+ I +I Sbjct: 534 KRFIQKSTSRRPLIMPVIMEI 554 >gi|55821746|ref|YP_140188.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55737731|gb|AAV61373.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] Length = 560 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 279/557 (50%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 7 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ +TH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 63 IVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAQL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 123 YEINANTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 182 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + +++G IK + Y +++++ T Sbjct: 242 QQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 302 GSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H +LA+ G+ + + Sbjct: 362 KIN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 421 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFKS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 481 KMILAGPDILSRGF-IYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 540 FLYEKTEREPIIIPMIL 556 >gi|158423307|ref|YP_001524599.1| metallo-beta-lactamase family hydrolase [Azorhizobium caulinodans ORS 571] gi|158330196|dbj|BAF87681.1| putative hydrolase of the metallo-beta-lactamase superfamily [Azorhizobium caulinodans ORS 571] Length = 555 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 236/553 (42%), Positives = 354/553 (64%), Gaps = 1/553 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ELVF PLGGVGEIGMN+ LYG G R+W+++D G+SF ++ PGVDLV PDI F+ Sbjct: 4 NNELVFAPLGGVGEIGMNLGLYGIGPRKQRQWLIVDLGMSFAGEEAPGVDLVMPDIRFLE 63 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + +TH HEDH GA+ DLW + PVY + F LL+AKR+ E + KIP Sbjct: 64 SVKDRIAGLVLTHGHEDHVGAMLDLWPRIGCPVYTTRFTAALLDAKRLQEPGAPKIPIEV 123 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++G + +G F +E V V HSIP++ AL IR+ G ++HTGDWKLD ++G VTD Sbjct: 124 VRSGGRAQIGPFEVEFVPVAHSIPDSHALAIRTAAGLVLHTGDWKLDPTPVVGHVTDIAR 183 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+G+EG+ A++CDSTNA+R+G SE + + D++ AK V TTFSS+V+R+R+ Sbjct: 184 LQALGDEGVRAMICDSTNAIRDGVSPSEADVAATLRDVVAKAKYRVAFTTFSSNVARVRA 243 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I + A R++V++G +++RV+ VA + G++ F ++FG PR++++ I TGSQ Sbjct: 244 IAEAAYANDREVVVVGRAMERVIGVAREQGMLDGLPAFRGADAFGFLPRDKVVAILTGSQ 303 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+AL++++ + + L+ D V+FSSR IPGNE + + N LV++G++V+ + + Sbjct: 304 GEPRAALSRIATDDHPEIALSHGDLVVFSSRTIPGNEKVVNTVINGLVKRGIKVMTDK-D 362 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP +L++MY+W+RPQV V +HGEPLHL H LA G+ V +G ++ Sbjct: 363 GLVHVSGHPRRGELEQMYKWVRPQVSVPVHGEPLHLTEHAALAKALGVPEVVSCADGHVI 422 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P E +++V +G KDG L+ + I +RR+L++VG +SV + +DN N+ G Sbjct: 423 RLAPGHAERVEDVPYGRLYKDGRLLIPDSARTIPERRRLAYVGIVSVALAVDNRGNLVGD 482 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P + GIP G L+L TV+TT LP+ RR+D + +SI A+R + W Sbjct: 483 PSVEITGIPERGEGGIDFLDLILDTVVTTAEGLPKARRRDPDAMSDSIERAVRGAVNGAW 542 Query: 543 GKKPLVTVFINKI 555 GKKP+ V I ++ Sbjct: 543 GKKPVCHVHIVEV 555 >gi|55823666|ref|YP_142107.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] gi|55739651|gb|AAV63292.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] Length = 560 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 279/557 (50%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 7 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ +TH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 63 IVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAQL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 123 YEINADTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 182 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + +++G IK + Y +++++ T Sbjct: 242 QQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 302 GSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H +LA+ G+ + + Sbjct: 362 KIN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 421 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFKS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 481 KMILAGPDILSRGF-IYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 540 FLYEKTEREPIIIPMIL 556 >gi|330466383|ref|YP_004404126.1| RNA-metabolising metallo-beta-lactamase [Verrucosispora maris AB-18-032] gi|328809354|gb|AEB43526.1| RNA-metabolising metallo-beta-lactamase [Verrucosispora maris AB-18-032] Length = 563 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 290/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+G IG NM ++ Y K +++DCGV FP + PGVDL+ PD I+ Sbjct: 20 LRIIPLGGLGAIGRNMTVFEY----DGKLLVVDCGVLFPDVEQPGVDLILPDFGPILDRL 75 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK R+ + + Sbjct: 76 DDIQAIVLTHGHEDHIGAVPYLLAHKADIPLVGSQFTLALVEAKLAERRIQPYTLTV--R 133 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD Sbjct: 134 EGGRERLGPFECEFFAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDGRITDLAGFA 193 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA G E+ I + I A+G ++V +F+S V R++ + Sbjct: 194 RLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKARGRIIVASFASHVHRVQQVF 253 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G++ L + + P EQ+++++TGSQG Sbjct: 254 DSALEHGRKVALIGRSMVRNMGIARDLGLLNIPAGLVVGLDEATSMPPEQIVLMSTGSQG 313 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ +A DTV+ +S +PGNE ++ + NRL G V+ +D Sbjct: 314 EPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLARAGAVVVHKDV-A 372 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L + +RP L+ +HGE HL AH L ++ G+A V +G + Sbjct: 373 KVHVSGHAPAGELLYLLNVVRPSNLMPVHGEWRHLRAHARLGIESGVAPDRVVLCEDGDV 432 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V DG +G ++ + +RR L G ++ V++D+ + Sbjct: 433 VDLVEGRASLVGRVKSRYVYVDGLAVGDVSESLLTERRILGDGGFIATTVVVDSVTGKVV 492 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + ++ V + D L++ + + + Sbjct: 493 AGPTVSAKGFS----EDAAAFNAVIPLVTEALNRAAADGITDPHQLQQIVRRTVGRWVND 548 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 549 AYRRRPMIVPTVVEV 563 >gi|227550364|ref|ZP_03980413.1| metallo-beta-lactamase [Enterococcus faecium TX1330] gi|257897229|ref|ZP_05676882.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|227180503|gb|EEI61475.1| metallo-beta-lactamase [Enterococcus faecium TX1330] gi|257833794|gb|EEV60215.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] Length = 559 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 273/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +++P+YA P A+ L+ K + ++ Sbjct: 61 IIQNLHKVKALVITHGHEDHIGGIPYLLKQVNIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|333024080|ref|ZP_08452144.1| putative metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. Tu6071] gi|332743932|gb|EGJ74373.1| putative metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. Tu6071] Length = 570 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ +G + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 28 LRVTPLGGLGEIGRNMTVFEFG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRNRL 83 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 84 NDIEGIVLTHGHEDHIGAVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--R 141 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ VG F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 142 EGNRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDHRLTDLTTFA 201 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ ++ Sbjct: 202 RLGEEGIDLLLTDSTNAEVPGFTPHERDISSVLRQVFGGARKRIIVASFASHVHRIQQVL 261 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GR++ +G S+ R + +A D+G +K L + ++ P E+++++ TGSQG Sbjct: 262 DAAHAYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLIVDVKALDDLPDEEVVLVCTGSQG 321 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE ++ + N L G V+ + Sbjct: 322 EPMAALSRMANRDH-QIRIVQGDTVVLASSLIPGNENSVYRVINGLTRWGANVVHKG-NA 379 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G Sbjct: 380 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPHDHIVIAEDGVA 439 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I +V G DG +G + + RR L G +SV +++D+ I Sbjct: 440 VDLIDGRARISGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVYLVVDSTTGKIT 499 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D + + + + + L++ I + + Sbjct: 500 GGPHIQARGSGIEDSAFAGVMPKIDDAIGRA----ARDGVLEAYQLQQLIRRTVGKWVSD 555 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 556 NYRRRPMILPVVVEV 570 >gi|295836204|ref|ZP_06823137.1| metallo-beta-lactamase [Streptomyces sp. SPB74] gi|197699236|gb|EDY46169.1| metallo-beta-lactamase [Streptomyces sp. SPB74] Length = 561 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ +G + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEFG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRNRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 75 DDVEGIVLTHGHEDHIGAVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ VG F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGNRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDHRLTDLTTFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ ++ Sbjct: 193 RLGEEGIDLLLTDSTNAEVPGFTPHERDISSVLRQVFGGARKRIIVASFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GR++ +G S+ R + +A D+G +K L + ++ P E+++++ TGSQG Sbjct: 253 DAAHAYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLIVDVKALDDLPDEEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE ++ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVVLASSLIPGNENSVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPHDHIVIAEDGVA 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I +V G DG +G + + RR L G +SV +++D+ I Sbjct: 431 VDLVDGRARISGKVQAGYVYVDGLSVGDVTETSLKDRRILGEEGIISVYLVVDSTTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D + + + + + L++ I + + Sbjct: 491 GGPHIQARGSGIEDSAFAGVMPKIDDAIGRA----ARDGVLEAYQLQQLIRRTVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 NYRRRPMILPVVVEV 561 >gi|153815345|ref|ZP_01968013.1| hypothetical protein RUMTOR_01579 [Ruminococcus torques ATCC 27756] gi|145847407|gb|EDK24325.1| hypothetical protein RUMTOR_01579 [Ruminococcus torques ATCC 27756] Length = 535 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 173/543 (31%), Positives = 290/543 (53%), Gaps = 14/543 (2%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 MN+ + Y +++DCG++FP+DD+ G+DLV PD+T++ + ITH HE Sbjct: 1 MNITAFEY----EDSIVVVDCGLAFPEDDMLGIDLVIPDVTYLKDNASKVKGFVITHGHE 56 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH GAL + +++P+Y + +G++E K + + + G +++G F IE Sbjct: 57 DHIGALPYVLKEINLPIYTTKLTMGIIENKLKEHNLLRTTKRKVVRHGQSINLGKFRIEF 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 ++ NHSI + AL I SP G ++HTGD+K+D + GD D IG +G+LALM DS Sbjct: 117 IKTNHSIQDASALAIYSPAGVVIHTGDFKVDYTPVFGDAIDLQRFAEIGKKGVLALMSDS 176 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 TNA R G SEK + I + +++ TF+S+V R++ II+ A + GRK+V+ Sbjct: 177 TNAERRGFTQSEKTVGITFDHIFAEHQNTRLIIATFASNVDRVQQIINSAYKYGRKVVVE 236 Query: 258 GSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 G S+ +++ A ++G + + + + YP E++++I TGSQGE +AL++++ Sbjct: 237 GRSMVNIIATASELGYLDVPENTLIEIDQMKNYPPEKMVLITTGSQGESMAALSRMAADV 296 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 R V + DT+IFSS IPGNE ++ + N L +G VI + HVSGH +L Sbjct: 297 HRKVTIQPNDTIIFSSNPIPGNEKSVSRVINELSSKGAEVIFQ----DAHVSGHACQEEL 352 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDE 434 K +Y ++P+ + +HGE HL A+ E+A GI V +++G +L L D E++D+ Sbjct: 353 KLIYSLVKPKYAIPVHGEYRHLKANAEVAKSLGIPKENVFIIQSGDVLELCDDSAEVVDK 412 Query: 435 VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAY 493 V G L DG +G ++ + R+ L+ G + V + L+ N + P+IV G Y Sbjct: 413 VHTGAILVDGLGVGDVGNIVLRDRQHLAEDGIIIVVLTLERRTNRLLAGPDIVSRGF-VY 471 Query: 494 DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 + ++ + V V R D ++ I ++ + K +KP+V I Sbjct: 472 VRESEELMDDARRAVSEAVDKCLSGRHTDWNKIKLVIRDSMNDYIWKKTKRKPMVIPIIM 531 Query: 554 KIS 556 + Sbjct: 532 DVD 534 >gi|254518772|ref|ZP_05130828.1| metallo-beta-lactamase superfamily protein [Clostridium sp. 7_2_43FAA] gi|226912521|gb|EEH97722.1| metallo-beta-lactamase superfamily protein [Clostridium sp. 7_2_43FAA] Length = 554 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 182/560 (32%), Positives = 305/560 (54%), Gaps = 11/560 (1%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M ++ + +PLGGVGEIG N+ S + I++DCG++FP +++ GVDL+ PDIT Sbjct: 1 MNSDLSVKIIPLGGVGEIGKNITAIE----VSDEIIVVDCGIAFPDEEMYGVDLIIPDIT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ + + FITH HEDH GA+ + L VP+Y + A+ ++E K + + Sbjct: 57 YLIQNKDKVKGFFITHGHEDHIGAIPYILKQLDVPIYGTKLALAIIENKLREHDLIETSN 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 IS G K+D+ S+E ++ HSI E+ L I++P+G I HTGD+K+D I V D Sbjct: 117 LISVDPGSKIDLENISVEFIQSTHSIAESCCLAIKTPLGVIFHTGDFKIDLTPIDDKVID 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D + IG EG++ LM DSTN R G +SEK I I + AKG +++ TF+S++ R Sbjct: 177 IDRISTIGKEGVILLMADSTNVERSGYTMSEKSIGNTFNRIFRGAKGRIIIATFASNIHR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ II+ + + R++ G S++ + VA ++ + + + + + Y E + +I Sbjct: 237 MQQIINASIENKRRVAFSGRSMESISKVAFELSYLHIPEGMLIEIDDINNYSNENVTIIT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G R +K+ D I S+ IPGN+ I + N+L ++G VI Sbjct: 297 TGSQGEPMAALARIAFGNHRKIKIERDDLFIISASPIPGNDKLISKVINQLFKKGADVIY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 ED E VHVSGH Y +LK M++ I+P+ + +HGE HL HK+LA+ V Sbjct: 357 EDLE-EVHVSGHAYREELKLMHRLIKPKYFMPVHGEYRHLKHHKDLAISLGMDSKDVFIA 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G++L + I +V G L DG +G L + R+ L+ G +++ V ++ Sbjct: 416 ERGEVLEISDKGARISGKVTTGTVLVDGLGVGDVGTLVLRDRKHLAQDGLVNIVVTIEKE 475 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 Y+I P+I+ G Y + + K L + + + + + L++ ++ AL Sbjct: 476 SYSIIAGPDIITRGF-VYVKESEDLIKELKQIATDELQNCLDDKILEWYLIKTNVKKALE 534 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + ++P + I +I Sbjct: 535 RYIYDKTKRRPTIIPIIMEI 554 >gi|293557237|ref|ZP_06675785.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|291600601|gb|EFF30905.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] Length = 559 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 270/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IIQNLHKIKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSGSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|99080604|ref|YP_612758.1| beta-lactamase-like [Ruegeria sp. TM1040] gi|99036884|gb|ABF63496.1| beta-lactamase-like protein [Ruegeria sp. TM1040] Length = 555 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 203/556 (36%), Positives = 315/556 (56%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG+P + I++D GV+FP D PGVDL+ PDI+ Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGAPGKERLILVDLGVAFPDMDTTPGVDLIMPDIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L IFITHAHEDH GA+ L+S L+VPVYA F + K + Sbjct: 61 WLAERADQLEGIFITHAHEDHIGAVAHLYSRLNVPVYARAFTANIARRKMEEQGHDPDSV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F+I +V ++HSIPE+ LVI SP G ++HTGD+KLD + I+G+ D Sbjct: 121 VTISPWPEVTKLGPFTIGAVPISHSIPESGGLVIDSPAGRVIHTGDFKLDANPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D I +G+ AL+CDSTN SE + NI ++ A G V TTF+S+V+R Sbjct: 181 PDLWAEISKDGVQALVCDSTNVFSPHAGRSESELGDNITKLIAEASGMVAATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ E+ GR IVLLG +++R++ +I+ G++ + E PRE L++I T Sbjct: 241 VKTLAQAGERAGRSIVLLGRAMRRMIEASIETGVLSDFPKVIQPEEAADIPRENLMLITT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R ++L E D +FSS+ IPGNE + I N+ E+GV V+ + Sbjct: 301 GSQGERRAATAQLARGKYRGMELKEGDLFLFSSKTIPGNEKGVIWIINQFSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL++M+ ++P++L+ +HGE HL H L ++GIA NG Sbjct: 360 DSSGLYHVSGHANRPDLEQMHDIVKPKILIPMHGEHRHLRQHARLGEEKGIASA-IAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L D ++ D + G DG + D + R +++ GH+ + +LD Sbjct: 419 MMMDLTGDAPKVADYIDTGRTYLDGSVKIGAMDGIVRDRIRMALNGHVVITAILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + G+ + +++ + + ++ + KD L + + R + Sbjct: 479 LGEPWVDLKGLAETGQSNAALAEIMEEDLNQFLMRAGKKTLKDDDKLEQELKRIARQTSQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 SEIGKKPEVTVIVSRM 554 >gi|164687211|ref|ZP_02211239.1| hypothetical protein CLOBAR_00852 [Clostridium bartlettii DSM 16795] gi|164603635|gb|EDQ97100.1| hypothetical protein CLOBAR_00852 [Clostridium bartlettii DSM 16795] Length = 551 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 186/559 (33%), Positives = 312/559 (55%), Gaps = 12/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK+ L +PLGG+GEIG N+ Y + I+IDCGVSFP DD+ G+DLV PDI + Sbjct: 1 MKSS-LKIIPLGGLGEIGKNITAIEY----EDEIIVIDCGVSFPDDDMLGIDLVIPDINY 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + +FITH HEDH G++ + L++ +YA+ IGL+ +K +SK+ Sbjct: 56 LLENQDKVKGLFITHGHEDHIGSIPYILKQLNMDIYATRLTIGLIASKLEEHNISKESL- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + GD + S+E +R HSI + +L I +P+G IVHTGD+K+D I G V D Sbjct: 115 IPVKEGDVIKFNKLSVEFIRATHSIADACSLAIFTPLGTIVHTGDFKIDYTPIDGRVMDL 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L A+G EG+L LM DSTN R G +SEK I + + I+ A G V+V TF+S++ R+ Sbjct: 175 NRLSALGEEGVLLLMADSTNVERSGHSLSEKTIGETLNRILDGATGRVIVATFASNIHRM 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+D + + RKI G S++ V VA+++G + ++ +S + + ++ +I T Sbjct: 235 QQIVDASLKESRKICFSGRSMENVSKVAMELGYLHIPEEAVISVDELNNHDNNKITIITT 294 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP + L++++ G R +KL D I S+ IPGN+ I + N+L ++G VI E Sbjct: 295 GSQGEPMAGLSRIAYGNHRKIKLERDDLFIISASPIPGNDKMISKVINQLYKKGAEVIYE 354 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D E VHVSGH Y +LK ++ +P+ + +HGE HL H +LA + G+ + + Sbjct: 355 DLE-DVHVSGHAYQEELKLIHSITKPKYFLPVHGEYRHLKHHADLAKKMGMKGENIFTME 413 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L + + +I ++ G+ DG +G ++ + RR L+ G + + +D + Sbjct: 414 NGDVLEISEEGAKISGKIRTGVLYVDGIGVGDVGNIVLRDRRNLARDGMVIIVFAIDMEN 473 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+++ G Y + I + + + + + ++L+ S+ ++ Sbjct: 474 FYLASGPDVITRGF-IYARENEDIINEIKEVSRQKIEECLLEQSTGWQVLKGSVRKSVEV 532 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + +KP V I + Sbjct: 533 LLFEKTKRKPSVFPIIMDV 551 >gi|322412699|gb|EFY03607.1| hypothetical protein SDD27957_10090 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 560 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 273/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P + L+ K + + Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLTLALIRGKLEEHGLWRDATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 HEINHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPRGTFIEANELKNYHANEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFET 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|83592906|ref|YP_426658.1| metallo-beta-lactamase [Rhodospirillum rubrum ATCC 11170] gi|83575820|gb|ABC22371.1| metallo-beta-lactamase [Rhodospirillum rubrum ATCC 11170] Length = 560 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 196/554 (35%), Positives = 320/554 (57%), Gaps = 6/554 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L F+PLGG GEIGMN+ LY + KW+M+D GV+F + PGVD++ PD +FI Sbjct: 13 EKNALYFVPLGGAGEIGMNLNLYAH----QGKWLMVDLGVTFGNETTPGVDIILPDPSFI 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + +L+ + +THAHEDH GA+ LW +L PVYA+PF L K E + + I Sbjct: 69 EERKGDLVGLVLTHAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEGIEPDVKLI 128 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + VG F IE + HSIPE L IR+ G ++HT DWK D + ++G D+ Sbjct: 129 EIPLGGRFTVGPFDIEMITTTHSIPEPNHLAIRTTAGTVLHTADWKFDPEPLVGPPADEA 188 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L +G+EG+LA++ DSTN EG SE +++++ D+ +G + V F+S+++R+ Sbjct: 189 ALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCFASNIARME 248 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I A+ GR++ L+G SL R++ A G +K FL DE PR++++ I TGS Sbjct: 249 TIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDKVVYICTGS 308 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+AL +++ G V L+ D VIFSSR IPGNE +I ++N+LVE GV++I Sbjct: 309 QGEPRAALKRIASGSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMGVKLITSR- 367 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +++ +Y +RP + + +HGE LHL H ++A G+A V + NG + Sbjct: 368 DAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGEFLHLDHHADVARDLGVAHVVRITNGAV 427 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL ++ +V G DG + + I R+++ + G ++V++ +D+ + G Sbjct: 428 VRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAIDDKGKLLG 487 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+I G+ + D ++ L V V + RKD + E++ A+R + ++ Sbjct: 488 TPKISARGLLDPEDDADEVAD-LTNRVRGAVNAVRPADRKDDAAVAEAVRLAVRRVFRQG 546 Query: 542 WGKKPLVTVFINKI 555 ++P+ + + ++ Sbjct: 547 QNRRPVTDIHVLRV 560 >gi|302554547|ref|ZP_07306889.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces viridochromogenes DSM 40736] gi|302472165|gb|EFL35258.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces viridochromogenes DSM 40736] Length = 561 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 166/554 (29%), Positives = 284/554 (51%), Gaps = 17/554 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 PLGG+GEIG NM ++ YG + +++DCGV FP+++ PG+DL+ PD + I Sbjct: 20 RVTPLGGLGEIGRNMTVFEYG----GRLLIVDCGVLFPEEEQPGIDLILPDFSSIRDRLD 75 Query: 67 NLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ I +TH HEDH G + L +P+ S + L+EAK R+ + Sbjct: 76 DIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--AE 133 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G + +G F E V VNHSIP+ +A+ IR+P G VHTGD+K+D + +TD + Sbjct: 134 GHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMAVHTGDFKMDQLPLDSRLTDLHAFAR 193 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ I+D Sbjct: 194 LSEEGIDLLLSDSTNAEVPGFVPPEREISNVLRQVFAGARKRIIVASFASHVHRIQQILD 253 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQGE Sbjct: 254 AAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQGE 313 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + +++ + DTVI +S IPGNE A+ + N L G V+ + Sbjct: 314 PMAALSRMANRDH-QIRIVQGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NAK 371 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 VHVSGH +L Y RP+ L+ +HGE HL A+ EL G+ + +G ++ Sbjct: 372 VHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVVV 431 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 L +I +V G DG +G + + R+ L G +SV V++D+ I G Sbjct: 432 DLVEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFVVIDSSTGKITG 491 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G D + + + + + Q + +++ + L + Sbjct: 492 GPHVQARGSGIEDSAFSDVIPRITEVLERS----AQDGVVEPHQMQQLVRRTLGKWVSDS 547 Query: 542 WGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 YRRRPMILPVVVEV 561 >gi|69246242|ref|ZP_00603855.1| Conserved hypothetical protein MG423 [Enterococcus faecium DO] gi|257879583|ref|ZP_05659236.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882602|ref|ZP_05662255.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257890251|ref|ZP_05669904.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257893435|ref|ZP_05673088.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|258616806|ref|ZP_05714576.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium DO] gi|260559752|ref|ZP_05831932.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|261207315|ref|ZP_05922002.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289566514|ref|ZP_06446937.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|293559751|ref|ZP_06676272.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|293567613|ref|ZP_06678957.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|294616535|ref|ZP_06696313.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|294623245|ref|ZP_06702116.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|314938911|ref|ZP_07846178.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943866|ref|ZP_07850599.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314948106|ref|ZP_07851507.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314951628|ref|ZP_07854673.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314993866|ref|ZP_07859200.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314996708|ref|ZP_07861731.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195343|gb|EAN09792.1| Conserved hypothetical protein MG423 [Enterococcus faecium DO] gi|257813811|gb|EEV42569.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257818260|gb|EEV45588.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257826611|gb|EEV53237.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257829814|gb|EEV56421.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|260074420|gb|EEW62742.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|260078375|gb|EEW66079.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289161668|gb|EFD09545.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|291589714|gb|EFF21518.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291590582|gb|EFF22313.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|291597352|gb|EFF28532.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291606299|gb|EFF35712.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|313589146|gb|EFR67991.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591676|gb|EFR70521.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313596224|gb|EFR75069.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597484|gb|EFR76329.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641785|gb|EFS06365.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313645442|gb|EFS10022.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 559 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 271/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|257888397|ref|ZP_05668050.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257899230|ref|ZP_05678883.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|293378001|ref|ZP_06624179.1| conserved hypothetical protein [Enterococcus faecium PC4.1] gi|293570376|ref|ZP_06681433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|257824451|gb|EEV51383.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257837142|gb|EEV62216.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|291609554|gb|EFF38819.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|292643366|gb|EFF61498.1| conserved hypothetical protein [Enterococcus faecium PC4.1] Length = 559 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 272/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 61 IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLREAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|116628467|ref|YP_821086.1| mRNA degradation ribonuclease J1/J2enzyme [Streptococcus thermophilus LMD-9] gi|116101744|gb|ABJ66890.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Streptococcus thermophilus LMD-9] gi|312279088|gb|ADQ63745.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Streptococcus thermophilus ND03] Length = 560 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 280/557 (50%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 7 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ +TH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 63 IVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAQL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 123 YEINADTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 182 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + +++G IK + Y +++++ T Sbjct: 242 QQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 302 GSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H +LA+ G+ + + Sbjct: 362 KIN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D N Sbjct: 421 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFNS 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 481 KMILAGPDILSRGF-IYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 540 FLYEKTEREPIIIPMIL 556 >gi|88855425|ref|ZP_01130089.1| hypothetical protein A20C1_01341 [marine actinobacterium PHSC20C1] gi|88815332|gb|EAR25190.1| hypothetical protein A20C1_01341 [marine actinobacterium PHSC20C1] Length = 558 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 290/560 (51%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L P+GG+GEIG NM + K +++DCGV FP++ PGVDL+ PD + Sbjct: 11 LEPGTLRVTPIGGLGEIGRNMTTFEI----DGKILIVDCGVLFPEEHQPGVDLILPDFSS 66 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ I +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 67 IRDRLDDILGIVLTHGHEDHIGAVPYLLRLRQDIPLIGSTLTLALIEAKLKEHRIKPYTL 126 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G K +G F +E V VNHSIP+ +A+ I + G ++HTGD+K+D + +TD Sbjct: 127 NVT--EGQKEKIGPFDLEFVAVNHSIPDALAVAITTAAGVVLHTGDFKMDQLPLDNRITD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G G+ + DSTNA G +E+ I + ++ A V+V +FSS V R Sbjct: 185 LRAFARLGEAGVDLFLSDSTNADVPGFTPNERDIGPVLEAVIAKAPRRVIVASFSSHVHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A RK+VL+G S+ R + +A D+G +K D + L + YP QL+ ++ Sbjct: 245 VQQVLDAAVANNRKVVLMGRSMVRNMGIAADLGFLKVPDGVLLDAKKAVNYPDNQLVYMS 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + LA+++ E +++ + DTVI +S IPGNE A+ + N L + G V+ Sbjct: 305 TGSQGEPMAVLARMANMEH-QIEVGQGDTVILASSLIPGNENAVYRVINGLTKLGANVVH 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +RP+ ++ +HGE HLVA+ LA+Q G+ Sbjct: 364 KA-NAKVHVSGHAAAGELLYCYNILRPKNVLPVHGEYRHLVANANLAIQSGVPSENTIIA 422 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L +I+ ++ G DG +G+ D + RR L+ G +S+ + +D Sbjct: 423 EDGTVIDLKDGHAQIVGQLDVGFVYVDGSSVGEITDADLKDRRILAEEGFISIFIAVDAQ 482 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI G + + +L V+ + D +D + + + Sbjct: 483 TGKVIVGPEIQSRGFA----EDADVFDAVLPQVVKALTDAAANGTRDSHAFAQVVRRTVG 538 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 539 RWVNTQHRRRPMIVPVVIEV 558 >gi|167646778|ref|YP_001684441.1| beta-lactamase domain-containing protein [Caulobacter sp. K31] gi|167349208|gb|ABZ71943.1| beta-lactamase domain protein [Caulobacter sp. K31] Length = 564 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 210/554 (37%), Positives = 328/554 (59%), Gaps = 1/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +ELVFLPLGG EIGMN LYGYG +RKWI++D GV+F PGV+++ PD FI Sbjct: 11 KDELVFLPLGGSNEIGMNFNLYGYGPADNRKWIVLDLGVTFGDQTTPGVEIILPDPEFIE 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +++ I +THAHEDH GA+H LW L PVYA+PF LL K + ++P Sbjct: 71 AYKDDIIGIVLTHAHEDHLGAVHWLWPRLKAPVYATPFTAFLLREKLRDAGLLGEVPITE 130 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G D+G F +E + + HSIPE + I++P+G I+HTGDWK+D + LG+ TD ++ Sbjct: 131 IPLGGSFDLGPFHLEMITLTHSIPEPNGVAIKTPLGTILHTGDWKIDPNPQLGEATDIEA 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G+EG+LA++CDSTN +G SE ++ + ++K G + V F+S+V+R+ + Sbjct: 191 IKALGDEGVLAMVCDSTNVFVDGEAGSEADVRVAMNRLIKGLTGKIAVACFASNVARMDT 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +I A+ GRK+ L G S+ R+ + A VG+++ + F++D+ P +++ + TGSQ Sbjct: 251 VIRAAQAAGRKVCLAGRSMHRMSAAARHVGLLEGLEPFITDDQAKYLPENEVLFLCTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE R+ALA+++ G +VKL++ D V+FSSR IPGNE+ I +++N+L ++GVR+ E Sbjct: 311 GEARAALARIAEGTHPHVKLSQGDHVVFSSRVIPGNEIPIRNLQNKLADRGVRLHTERDT 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +HVSGHP ++LK+MYQW RP + V HGE HL+ H A + RNG M+ Sbjct: 371 PGIHVSGHPCRDELKQMYQWARPTIAVPTHGERRHLIEHAAFAKDLQVPHAISPRNGDMV 430 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P +IIDEV G DG ++ + +RR +F G L+V+V+LD I Sbjct: 431 LLAPGHPKIIDEVPSGRLYVDGGVVTPENGEALRERRHAAFNGMLAVSVVLDGKSRIVSG 490 Query: 483 PEIVDIGIPAYDGD-GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++ +G+ L + T + R+ + + +IS A++ ++ Sbjct: 491 PQVRGLGLAGDAEYPLDDALDDLAEEAETAFKRMKDDLREIDEAIESAISKAVKKAAFRI 550 Query: 542 WGKKPLVTVFINKI 555 W +KP+V + +I Sbjct: 551 WERKPVVETTVLRI 564 >gi|241896027|ref|ZP_04783323.1| metallo-beta-lactamase [Weissella paramesenteroides ATCC 33313] gi|241870758|gb|EER74509.1| metallo-beta-lactamase [Weissella paramesenteroides ATCC 33313] Length = 559 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 274/559 (49%), Gaps = 10/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ +E LGG+GEIG N YG + I++D GV FP+DDL G+D V PD T+ Sbjct: 7 IRPDETAVYALGGLGEIGKNTYGIEYG----DEIIVVDAGVKFPEDDLLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + A+ ITH HEDH GA+H + ++VPVYA P AI L++ K + Sbjct: 63 LKENKDKIKALVITHGHEDHIGAIHFFLNAVNVPVYAGPLAIALIKNKLDEHGLLNSTEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+E R HSIP+T + + +P G IV TGD+K D + Sbjct: 123 HEINEDTVLKFDKMSVEFFRTTHSIPDTFGVAVHTPSGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG+EG+L LM DSTNA R SE+ + K I + G ++ TF+S++SRI Sbjct: 183 QKMARIGSEGVLLLMSDSTNAERPEFSKSERWVGKTIDKLFNEIDGRIIFATFASNMSRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + A + GRKI + G S++ V+ + +G + + + + P E++++++T Sbjct: 243 QMATKAAIEHGRKIAIFGRSMESAVTNGLALGYLDIPEDMLVDAHEINRLPPEEVLIMST 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G R + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 303 GSQGEPMAALARIANGTHRQISIQPNDTVIFSSSPIPGNTQSVNRVINELEEAGANVIHG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M ++P+ + IHGE L H+ L GI + Sbjct: 363 KIN-NIHASGHGGQEEQKLMLSLMKPKFFMPIHGEYRMLKVHEGLGHDIGIPEENTFVLD 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L + PD + + DG IG + R+ LS G + V +D + Sbjct: 422 NGDVLAVSPDEARVAGHIPAQDTYVDGNGIGDVGTAVLRDRQMLSEDGLVVVVATIDLKN 481 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + K + ++ + ++R ++ S L+ Sbjct: 482 KEITAGPDILSRGF-IYMRESEDLINEGRKVIFHAILSAMHEPTANEHIIRNAVVSQLQR 540 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++PL+ I Sbjct: 541 FLFEQTKRRPLILPMFIMI 559 >gi|302522249|ref|ZP_07274591.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. SPB78] gi|318062784|ref|ZP_07981505.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. SA3_actG] gi|318081036|ref|ZP_07988368.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. SA3_actF] gi|302431144|gb|EFL02960.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sp. SPB78] Length = 561 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ +G + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEFG----GRLLIVDCGVLFPEEEQPGIDLILPDFTSIRNRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 75 NDIEGIVLTHGHEDHIGAVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ VG F E + VNHSIP+ +A+ IR+P G +VHTGD+K+D + +TD + Sbjct: 133 EGNRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDHRLTDLTTFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + + A+ ++V +F+S V RI+ ++ Sbjct: 193 RLGEEGIDLLLTDSTNAEVPGFTPHERDISSVLRQVFGGARKRIIVASFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GR++ +G S+ R + +A D+G +K L + ++ P E+++++ TGSQG Sbjct: 253 DAAHAYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLIVDVKALDDLPDEEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE ++ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVQGDTVVLASSLIPGNENSVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPHDHIVIAEDGVA 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I +V G DG +G + + RR L G +SV +++D+ I Sbjct: 431 VDLIDGRARISGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVYLVVDSTTGKIT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P I G D + + + + + L++ I + + Sbjct: 491 GGPHIQARGSGIEDSAFAGVMPKIDDAIGRA----ARDGVLEAYQLQQLIRRTVGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 NYRRRPMILPVVVEV 561 >gi|27380013|ref|NP_771542.1| hypothetical protein bll4902 [Bradyrhizobium japonicum USDA 110] gi|27353167|dbj|BAC50167.1| bll4902 [Bradyrhizobium japonicum USDA 110] Length = 557 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 239/555 (43%), Positives = 356/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 K +ELVF PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PDI+F Sbjct: 4 KPDELVFAPLGGVGEIGMNLSIYGLGNRQQRAWLAVDLGVSFGDEEHLPGIDLIMPDISF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KERKNLM + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER + KIP Sbjct: 64 LEKERKNLMGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSAALFEAKCAAERNAPKIPV 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +VD+G F++E + V HSIPE+ AL I + G ++HTGDWK+D I+G TD+ Sbjct: 124 TVVPSGGRVDIGPFNVEFIPVAHSIPESHALAIHTEAGIVLHTGDWKIDPTPIIGRPTDE 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + + I ++K AKG V VTTF+S+V+RI Sbjct: 184 KRLRELGDEGVLALIGDSTNAVRDGRSPSEAEVARTIAGLVKAAKGRVAVTTFASNVARI 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +++ D A R++V++G ++ RV VA + G + Q F S + +G P+++++ + TG Sbjct: 244 KAVADAARAADREVVVVGRAMDRVSQVARETGYLDGVQNFRSIDVYGHLPQDKVLALCTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+++ + + L D VIFSSR IPGNE A+G I N LV QGV VI + Sbjct: 304 SQGEARAALARIANDDHPEITLNRGDCVIFSSRTIPGNEKAVGSIINNLVLQGVEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA G+ V RNG Sbjct: 364 -DALVHVSGHPRRDELRDMIAWVRPQLLIPVHGEALHLHEHAKLARAAGVPRVLVCRNGD 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +++L P I+ EV G KDG ++ + +RR+++F G V + + + Sbjct: 423 LVKLGPGDPGIVGEVPSGRLYKDGTILEDSKSRAVVERRRMAFSGCAFVAIAMTAQGELV 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +G+P + G L+ + V++T+ LP+ RR+D L ES+ A+R+++ + Sbjct: 483 DEPEVDLVGVPEKNRAGEAFDDLVFEAVMSTIEGLPKARRRDPDALAESVRRAVRAVINE 542 Query: 541 VWGKKPLVTVFINKI 555 WGKKP V + + Sbjct: 543 HWGKKPACLVHVLTV 557 >gi|293364410|ref|ZP_06611136.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307702625|ref|ZP_07639577.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291317256|gb|EFE57683.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307623741|gb|EFO02726.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 559 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|257885025|ref|ZP_05664678.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257820877|gb|EEV48011.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] Length = 559 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 271/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA GI + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGIPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|148255898|ref|YP_001240483.1| metallo-beta-lactamase family hydrolase [Bradyrhizobium sp. BTAi1] gi|146408071|gb|ABQ36577.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Bradyrhizobium sp. BTAi1] Length = 556 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 237/555 (42%), Positives = 357/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL F PLGGVGEIGMN+++YG G+ R W+ ID GVSF ++ PG+DL+ PD+ F Sbjct: 3 RPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAIDLGVSFGDEEHLPGIDLIMPDVAF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KER NL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER+ KIP Sbjct: 63 LEKERNNLVGLVLTHAHEDHFGAIIDLWPRLKCPIYATKFSAALFEAKCEAERLPAKIPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +VD+G F++E + V HSIPE+ AL I + VG ++HTGDWK+D +LG TD+ Sbjct: 123 TVIPSGGRVDIGPFNVEFIPVAHSIPESHALAIHTEVGTVLHTGDWKIDPTPVLGAPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+ G+LAL+ DSTNA+REG SE + K I ++K AKG V VTTF+S+V+RI Sbjct: 183 KRLRELGDAGLLALIGDSTNAVREGRSPSEAEVAKTIAMLVKEAKGRVAVTTFASNVARI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A + R++V++G +++RVV VA + G + Q F + +G +P ++++ + TG Sbjct: 243 RAVADAAREAEREVVIVGRAMERVVQVARETGYLDGVQNFRGMDLYGHFPADKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+++ + V L + DTVIFSSR IPGNE A+G + N LV+QG+ +I + Sbjct: 303 SQGEARAALARIANDDHPLVTLNKGDTVIFSSRTIPGNEKAVGAVINGLVQQGIEIITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 VHVSGHP ++L+ M W RPQ+L+ +HGE LHL H LA G+ V RNG Sbjct: 363 -NHLVHVSGHPRRDELRDMIAWTRPQLLIPVHGEALHLHEHARLARACGVPKVITCRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +++L P IIDE+ G KDG ++ + +RR+++F G + V + + + Sbjct: 422 LVKLGPGEPGIIDELPAGRLYKDGSIVEDAKSRAVVERRKMAFAGCIFVALAITEKGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP + G ++ ++ V++T LP+ RR+D ES+ A+R+ + + Sbjct: 482 DDPEVDMVGIPEKNAAGEEMDDIVFDAVVSTFEGLPRARRRDPDAAAESVRRAVRAAVNE 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKP+ V + ++ Sbjct: 542 QWGKKPICLVHVLEV 556 >gi|289423582|ref|ZP_06425383.1| putative ribonuclease J1 [Peptostreptococcus anaerobius 653-L] gi|289156084|gb|EFD04748.1| putative ribonuclease J1 [Peptostreptococcus anaerobius 653-L] Length = 556 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 182/559 (32%), Positives = 303/559 (54%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+++ +PLGG+ EIG NM + Y + I+ID G+ FP+D+L G+D+V PDIT++ Sbjct: 5 NNDKIKIIPLGGLNEIGKNMTIIEY----KDEIIVIDAGLCFPEDELLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + IFITH HEDH GA+ + ++VPVY S ++ L++ K R++ K Sbjct: 61 EKNIDKVKGIFITHGHEDHIGAMPYILKKINVPVYGSALSMELVKVKLKEHRIT-KAKLN 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D++ + S+E +RVNHSIP+ ++ + + G I HTGD+K+D I G++ D Sbjct: 120 TVGSRDQIKLKHMSVEFIRVNHSIPDAYSIAVHTNQGVIYHTGDFKIDLTPIDGEMMDIH 179 Query: 182 SLCAIGN-EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 +C I + EGIL +M DSTNA + G+ +SEK + + D+ K A+ ++V TF+S++ R Sbjct: 180 RICQISDEEGILLMMADSTNADKPGSTMSEKSVGAGLDDLFKKAQNSRIIVATFASNIHR 239 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++ I D A+Q GRK+ + G S+ ++ VA D+G + D+ + Y E+L++I T Sbjct: 240 LQQIADAAKQYGRKVAVSGRSMVNILGVAKDLGYLTTDEHIIDLNDIHKYKDEELVIITT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ + D VI S+ IPGNE + I N L+E+G V++ Sbjct: 300 GSQGEPMSALARMANSEHKKVEIKKGDLVIISAHPIPGNEKTVSKIINFLLEKGAEVVSS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 D +HVSGH ++LK M + +P+ + +HGE L H ELA G + + Sbjct: 360 DI-ADIHVSGHARQDELKLMQAFAKPKFFLPVHGEYKMLKRHAELAKSVGTNPDNIFIIS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG +L + V G L DG +G ++ + R+ LS G +++ V L Sbjct: 419 NGDILEVDRRSARKAGRVASGRILIDGLGVGDVGNIVLRDRKHLSEDGLMTIVVTLSKED 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + + K+ ++ +I L+ Sbjct: 479 GRILAGPDIISRGF-VYVRESEGLMDGAKAIINNVFEQCESKNIKEWAYIKNTIKEELKD 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + P++ + ++ Sbjct: 538 YLYIKTKRNPMILPILMEV 556 >gi|291458554|ref|ZP_06597944.1| metallo-beta-lactamase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419087|gb|EFE92806.1| metallo-beta-lactamase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 615 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 181/559 (32%), Positives = 295/559 (52%), Gaps = 18/559 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ +IGMN+ + I++DCG+SFP DD+ G+DLV PDI+++ + Sbjct: 66 VRVIPLGGLDQIGMNITAIE----TEESLIIVDCGLSFPSDDMLGIDLVIPDISYLKSKM 121 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH GAL + ++VPVYA+ + L+E K V + + + + + Sbjct: 122 EKIKGFVITHGHEDHIGALPYVLQQINVPVYATKLTLALIERKLVERGMDQLVKTKTMKF 181 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G V+ G +E V+ NHSI + AL I +P G +VHTGD+K+D + GD D Sbjct: 182 GQTVNFGDLKVEFVKTNHSIQDAAALAIYTPAGVLVHTGDFKVDYTPVFGDQIDLQRFAE 241 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRIRSII 244 +G G+LA+ DSTNA + G+ +SE+ + + I K +LV TF+S+V R++ II Sbjct: 242 LGKNGVLAMFSDSTNAEKPGSTMSERTVGRTFDLIFAEHKNNRILVATFASNVDRVQQII 301 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A + GRK+V+ G S+ V+SVA ++ I + + E+ YP E+ ++I TGSQG Sbjct: 302 NTAAKYGRKVVVEGRSMVNVISVASELHYINIPEGTLIDIENLKDYPDEKTVLITTGSQG 361 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ G R V + D ++ SS IPGNE+A+ + N L +Q +VI + Sbjct: 362 ESMAALSRMASGMHRKVHITPNDVIVMSSHPIPGNELAVDKVVNELTKQHAQVIMQ---- 417 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 HVSGH DLK +Y ++P+ + +HGE H A ELA G+ + NG + Sbjct: 418 DTHVSGHACSEDLKLLYSLVKPRYAIPVHGEYHHRRAAAELAAAVGVERENCLILENGDV 477 Query: 422 LRLFPD----PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 L+ + EI D V G DG +G ++ I R+ L+ G + V + L+ Sbjct: 478 LQFSAESGEMKAEIRDHVQAGGIFVDGLGVGDVGNIVIRDRQNLAQNGIIVVVLTLEKYS 537 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+++ G Y + + + V V D D ++ I +L Sbjct: 538 GHLLAGPDLISRGF-VYVRESEDLMEEARVQVQDAVDDCLVRHVNDWGKIKNIIKDSLAD 596 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 597 FLWKRIKRNPVILPVIMEV 615 >gi|257467714|ref|ZP_05631810.1| metal dependent hydrolase [Fusobacterium ulcerans ATCC 49185] Length = 624 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 294/562 (52%), Gaps = 14/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G NM + Y + I+ID GV+FP D+L G+DLV PD +FI Sbjct: 69 KEEKMYVIPLGGLEEVGKNMTVIQY----RDEIIIIDSGVTFPDDNLLGIDLVIPDFSFI 124 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-I 118 + + +FITH HEDH G++ L+ + VP++ + L ++K SK+ Sbjct: 125 ENNKDKVKGLFITHGHEDHIGSIPYLYQKIDKSVPMFGGKLTLALAKSKFDNPGFSKELP 184 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + KV VG F++E ++V HSI + +L I SP G + HTGD+K+D + + Sbjct: 185 KMKEVKGRSKVKVGKYFTVEFIKVTHSITDAYSLAISSPAGVVFHTGDFKIDLTPVDSEG 244 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L IG +G+ ++ DSTN+ EG SE+ + + AKG ++V F+S V Sbjct: 245 VDFARLSQIGEQGVDLMLSDSTNSEVEGFTPSERSVGEAFKQEFSKAKGRIIVAAFASHV 304 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ II+ AE+ GR+I + G SL +V +A ++G ++ + + ++ ++++ Sbjct: 305 HRLQQIINTAEEYGRRIAIDGRSLVKVFEIASNLGYLRIPEGMMVALSEVDGLKDNKVVI 364 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A+ + N L++ V Sbjct: 365 LCTGTQGEPMAALSRIAKNMHKHIKIKEGDTVIISATPIPGNEKAVSNNINNLLKYDAEV 424 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 + + +HVSGH ++ K M I+P+ + +HGE L AHK+ A++ G+ V Sbjct: 425 VFKKI-AGIHVSGHGSKDEQKLMLNLIKPRYFMPVHGEHKMLKAHKDTAIETGVPKNNVI 483 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NG + + ++I +V G L DG +G ++ + R+QLS G + + Sbjct: 484 IAQNGSKVEVTKSAVKIKGKVNAGSTLVDGLGVGDIGNIVLKDRQQLSQDGVVVIVFTTS 543 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+IV G Y + I K ++ + + ++ KD + + Sbjct: 544 KETGKIIAGPDIVTRGF-VYSKESDDIIKEAIEAIKAKLSNIEGHSTKDWNTFKNTTRDI 602 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + P+V I +I Sbjct: 603 ASKYFYNKTKRNPVVLPIIMEI 624 >gi|110680445|ref|YP_683452.1| metallo-beta-lactamase family protein [Roseobacter denitrificans OCh 114] gi|109456561|gb|ABG32766.1| metallo-beta-lactamase family protein [Roseobacter denitrificans OCh 114] Length = 555 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 194/557 (34%), Positives = 313/557 (56%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG P + + I++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGKPDAERLIVVDMGVAFPDMDGSPGVDLILPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R + A+F+THAHEDH GA+ + L PVYA F + K + Sbjct: 61 WLQERRDRIEAVFVTHAHEDHVGAVAHTYEKLGAPVYARAFTANIARRKMAEHGHPEDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V G F + + ++HSIPE+ A+VI +P G ++H+GD+KLD+ ++G+ D Sbjct: 121 HTVSPWPETVSAGPFKVSFLPISHSIPESSAMVIDTPEGRVIHSGDFKLDETPLVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + EG+ AL+CDSTN + SE + I +++++A+G V+ TTF+S+V+R Sbjct: 181 PELWAEVSKEGVKALICDSTNVFSQHPGRSEASVGPEITNLVQSAEGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ D + GR IVL+G +++R++ A + G+++ +S E PRE L+++ T Sbjct: 241 VKTLADAGVRAGRSIVLMGRAMRRMIEAAAETGVLQDFPSVVSPEDARSIPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ + +++ E D FSS+ IPGNE + I N E GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYQGMEMKEGDLFPFSSKTIPGNEKGVIRIINAFSELGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+R+ + + PQV++ +HGE HL H ++A Q G V NG Sbjct: 360 DSSGLYHVSGHANRPDLERLSEIVNPQVVIPMHGEHRHLREHVKIAEQNGRTGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + +I + V G DG + D + R +++ GH+ V +++D Sbjct: 419 MMVDLSGNQPKIAEYVETGRTYLDGTVQIGALDGVVRDRIRMALNGHVVVTLIVDEDDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+P + +L + + +D L E + +R + Sbjct: 479 LGDPWCELKGLPETGRSKASLVDVLEADLGQWLGRADPKTMRDDDKLNEGLRRVVRQTSQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP V+V ++++S Sbjct: 539 DEIGKKPEVSVIVSRLS 555 >gi|126740397|ref|ZP_01756085.1| metallo-beta-lactamase family protein [Roseobacter sp. SK209-2-6] gi|126718533|gb|EBA15247.1| metallo-beta-lactamase family protein [Roseobacter sp. SK209-2-6] Length = 556 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 200/557 (35%), Positives = 306/557 (54%), Gaps = 4/557 (0%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDI 58 M +E L++LPLGG GEIGMN +YGYG + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSTDERLIYLPLGGAGEIGMNAYVYGYGKQGQERLILVDLGVAFPDMDGTPGVDLIMPDI 60 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + L AI ITH HEDH GA+ L+ L+VPVYA F L K Sbjct: 61 TWLRERADQLEAILITHGHEDHIGAVAHLYGQLNVPVYARAFTANLARRKMEERGHDPMQ 120 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + +G F++ + HSIPE+ LVI SP G +VHTGD+KLD D ++G+ Sbjct: 121 VHTVGAWPEVTKLGPFTVGVAPMAHSIPESGGLVIDSPAGRVVHTGDFKLDRDPLVGEPF 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + I G+ AL+CDSTN + SE + + I ++ AKG V TTF+S+V+ Sbjct: 181 DPEMWTEIAKPGVKALVCDSTNVFSQHPGRSESDLPEEITKLISEAKGMVAATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + ++ GR IVLLG +++R++ A + G++ K + E PRE L++I Sbjct: 241 RVKTLAEAGDRAGRSIVLLGRAMRRMIEAATETGVLTKFPKVIQPEEARDIPRENLMLIT 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQ++RG+ R ++L E D +FSS+ IPGNE + I N+ E+GV V+ Sbjct: 301 TGSQGERRAATAQMARGKYRGLELKEGDLFLFSSKTIPGNEKGVIRIINQFSEKGVDVV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +D+ HVSGH DL+ ++ ++PQ+L+ +HGE HL H L +GI V N Sbjct: 360 DDSSGLYHVSGHANGPDLEELHDLLKPQMLIPMHGEHRHLRQHARLGEAKGIPSAVVV-N 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G M+ L D + + + G DG + D + R +++ GH+ V +++D Sbjct: 419 GMMMDLTGDTPRVTEWIETGRTYLDGSVKIGALDGVVRDRIRMALNGHVVVTLIMDEEDE 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G P G+ + ++L + + ++ KD L + + +R Sbjct: 479 PLGEPWCDVKGLAETGTSNAALIEVLEEDLNQFLMRAGAKTLKDDGKLEDELRRIVRQTS 538 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV I+++ Sbjct: 539 QAEIGKKPEVTVVISRM 555 >gi|307707799|ref|ZP_07644276.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] gi|307616059|gb|EFN95255.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] Length = 559 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|116516160|ref|YP_815649.1| metallo-beta-lactamase domain-containing protein [Streptococcus pneumoniae D39] gi|194398194|ref|YP_002036841.1| hypothetical protein SPG_0126 [Streptococcus pneumoniae G54] gi|225860170|ref|YP_002741679.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230182|ref|ZP_06963863.1| hypothetical protein SpneCMD_05881 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255776|ref|ZP_06979362.1| hypothetical protein SpneCM_09328 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501932|ref|YP_003723872.1| metallo-beta-lactamase [Streptococcus pneumoniae TCH8431/19A] gi|116076736|gb|ABJ54456.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae D39] gi|194357861|gb|ACF56309.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|225726774|gb|ACO22625.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298237527|gb|ADI68658.1| metallo-beta-lactamase [Streptococcus pneumoniae TCH8431/19A] gi|301793414|emb|CBW35781.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|327390542|gb|EGE88882.1| ribonuclease J 1 [Streptococcus pneumoniae GA04375] gi|332204146|gb|EGJ18211.1| ribonuclease J 1 [Streptococcus pneumoniae GA47901] Length = 559 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|168487077|ref|ZP_02711585.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae CDC1087-00] gi|183570017|gb|EDT90545.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae CDC1087-00] Length = 559 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|15900063|ref|NP_344667.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|111658060|ref|ZP_01408761.1| hypothetical protein SpneT_02000749 [Streptococcus pneumoniae TIGR4] gi|148987864|ref|ZP_01819327.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|148996545|ref|ZP_01824263.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|149005877|ref|ZP_01829606.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|149010998|ref|ZP_01832303.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|149017802|ref|ZP_01834261.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168483772|ref|ZP_02708724.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC1873-00] gi|168492405|ref|ZP_02716548.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC0288-04] gi|168493832|ref|ZP_02717975.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC3059-06] gi|168576442|ref|ZP_02722325.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae MLV-016] gi|169833533|ref|YP_001693657.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|221231053|ref|YP_002510205.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225853753|ref|YP_002735265.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae JJA] gi|225858001|ref|YP_002739511.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 70585] gi|237649787|ref|ZP_04524039.1| hypothetical protein SpneC1_03499 [Streptococcus pneumoniae CCRI 1974] gi|237821485|ref|ZP_04597330.1| hypothetical protein SpneC19_04087 [Streptococcus pneumoniae CCRI 1974M2] gi|303255166|ref|ZP_07341242.1| hypothetical protein CGSSpBS455_06806 [Streptococcus pneumoniae BS455] gi|303259179|ref|ZP_07345157.1| hypothetical protein CGSSp9vBS293_02262 [Streptococcus pneumoniae SP-BS293] gi|303260936|ref|ZP_07346885.1| hypothetical protein CGSSp14BS292_02143 [Streptococcus pneumoniae SP14-BS292] gi|303263262|ref|ZP_07349185.1| hypothetical protein CGSSpBS397_02811 [Streptococcus pneumoniae BS397] gi|303265427|ref|ZP_07351327.1| hypothetical protein CGSSpBS457_01237 [Streptococcus pneumoniae BS457] gi|303268015|ref|ZP_07353817.1| hypothetical protein CGSSpBS458_11273 [Streptococcus pneumoniae BS458] gi|307066807|ref|YP_003875773.1| putative metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae AP200] gi|14971589|gb|AAK74307.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|147757120|gb|EDK64159.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|147762233|gb|EDK69194.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|147764634|gb|EDK71564.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|147926328|gb|EDK77401.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|147931366|gb|EDK82344.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168996035|gb|ACA36647.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|172042859|gb|EDT50905.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC1873-00] gi|183573414|gb|EDT93942.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC0288-04] gi|183576199|gb|EDT96727.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC3059-06] gi|183577806|gb|EDT98334.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae MLV-016] gi|220673513|emb|CAR67993.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225720785|gb|ACO16639.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 70585] gi|225723536|gb|ACO19389.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae JJA] gi|302597996|gb|EFL65066.1| hypothetical protein CGSSpBS455_06806 [Streptococcus pneumoniae BS455] gi|302637773|gb|EFL68259.1| hypothetical protein CGSSp14BS292_02143 [Streptococcus pneumoniae SP14-BS292] gi|302639597|gb|EFL70054.1| hypothetical protein CGSSpBS293_02262 [Streptococcus pneumoniae SP-BS293] gi|302642711|gb|EFL73056.1| hypothetical protein CGSSpBS458_11273 [Streptococcus pneumoniae BS458] gi|302644867|gb|EFL75114.1| hypothetical protein CGSSpBS457_01237 [Streptococcus pneumoniae BS457] gi|302647035|gb|EFL77259.1| hypothetical protein CGSSpBS397_02811 [Streptococcus pneumoniae BS397] gi|306408344|gb|ADM83771.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pneumoniae AP200] gi|332076577|gb|EGI87039.1| ribonuclease J 1 [Streptococcus pneumoniae GA17545] gi|332077436|gb|EGI87897.1| ribonuclease J 1 [Streptococcus pneumoniae GA41301] gi|332202056|gb|EGJ16125.1| ribonuclease J 1 [Streptococcus pneumoniae GA41317] gi|332203295|gb|EGJ17362.1| ribonuclease J 1 [Streptococcus pneumoniae GA47368] Length = 559 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|251783316|ref|YP_002997621.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391948|dbj|BAH82407.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323128040|gb|ADX25337.1| hypothetical protein SDE12394_09555 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 560 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 274/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWRDATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 HEINHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEANELKNYHANEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFET 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|331267202|ref|YP_004326832.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326683874|emb|CBZ01492.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 559 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 KMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|163839458|ref|YP_001623863.1| RNA-metabolising metallo-beta-lactamase [Renibacterium salmoninarum ATCC 33209] gi|162952934|gb|ABY22449.1| RNA-metabolising metallo-beta-lactamase [Renibacterium salmoninarum ATCC 33209] Length = 563 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 296/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K L +PLGG+GEIG NMA++ K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 15 LKEGTLRIVPLGGLGEIGRNMAVFEI----DGKLLIVDCGVLFPEETQPGVDLILPDFSY 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 71 IEDRLDDVVAVVLTHGHEDHIGAVPYLLRLRSDIPLIGSQLTLALIEAKLQEHRIKPYTM 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G G F E V VNHSIP+ +A+ IR+ GN++HTGD+K+D + G +TD Sbjct: 131 AVT--EGQVEKFGPFECEFVAVNHSIPDALAVFIRTAGGNVLHTGDFKMDQLPLDGRITD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA G +E+ I + + A+ ++V +FSS V R Sbjct: 189 LRAFARLGEEGVDLFMADSTNADVPGFTTAEREIGPVLDTLFGQAEKRIIVASFSSHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +++ A GRK+ +G S+ R + +A +G + + + + ++ P ++++++ Sbjct: 249 VQQVLNAAALHGRKVAFVGRSMVRNMGIASQLGYLDVPENILVDMKNIENLPDSKIVLMS 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ R +++ + DTVI +S IPGNE A+ + N L++ G VI Sbjct: 309 TGSQGEPMAALSRMANGDHR-IQVGQGDTVILASSLIPGNENAVFRVINGLLKLGADVIH 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + VHVSGH +L Y I+P+ + +HGE HL+A+ ++A G+ V Sbjct: 368 KGS-AKVHVSGHAAAGELLYCYNIIKPRNAMPVHGETRHLIANGKIAQSAGVPAENVLLT 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 G ++ L I+ +V G DG +G+ + + RR L G +S+ +++ Sbjct: 427 DGGTVVDLKNHVARIVGQVECGFVYVDGSSVGEVTETDLKDRRILGDEGFISIVTVVNRT 486 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PEI G+ D +I + + V + L++ + + Sbjct: 487 TGKIVSGPEIHARGVAEEDSVFDEIIPKINAALEEAV---MASKDHTAYQLQQVVRHVVG 543 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + ++P++ + + Sbjct: 544 TWVNRKLRRRPMIIPVVLE 562 >gi|270291931|ref|ZP_06198146.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] gi|270279459|gb|EFA25301.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] Length = 560 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 KMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|148992712|ref|ZP_01822355.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|168489387|ref|ZP_02713586.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP195] gi|307126356|ref|YP_003878387.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 670-6B] gi|147928438|gb|EDK79453.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|183572015|gb|EDT92543.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP195] gi|306483418|gb|ADM90287.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 670-6B] gi|332075804|gb|EGI86271.1| ribonuclease J 1 [Streptococcus pneumoniae GA17570] Length = 559 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QGEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|315612260|ref|ZP_07887174.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315315653|gb|EFU63691.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 560 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 KMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASIQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|328957203|ref|YP_004374589.1| ribonuclease J1 [Carnobacterium sp. 17-4] gi|328673527|gb|AEB29573.1| ribonuclease J1 [Carnobacterium sp. 17-4] Length = 594 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 169/552 (30%), Positives = 277/552 (50%), Gaps = 11/552 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNEAAVFAIGGLGEIGKNT----YGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A L+ K + + Sbjct: 61 IVQNIHKVKALVITHGHEDHIGGIPFLLRQANIPIYAGPLASALIRNKLTEHGLLRDTVL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D + S+ R HSIPE +V+++P GNIV TGD+K D + + Sbjct: 121 HEIGEDDVIKFRKTSVSFFRTTHSIPEAFGIVVKTPPGNIVLTGDYKFDFTPVG-KPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG+EG+LAL+ DSTNA SE+ + ++I IM+ +G ++ TF+S++SR+ Sbjct: 180 HRMAKIGDEGVLALLSDSTNAEIPTFTKSEQVVGESITSIMQKVEGRIIFATFASNISRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + + A + GRKI + G S++ V+ +G I ++ F+ P ++ I++ T Sbjct: 240 QQVANAAIKTGRKIAVFGRSMESSVATGRQLGYITAPEETFIEPRDINRLPAKESIILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPGDTVIFSSSPIPGNTSSVNRVINLLSEAGADVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M + ++P+ + +HGE H LA GI + Sbjct: 360 RVN-NVHTSGHGGQQEQKLMLRLMKPKYFIPVHGEYRMQKIHAGLAELVGIPKENSFILD 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ++ L D G DG IG ++ + R+ LS G + V V +D Sbjct: 419 NGDVIALTADSAREAGHFEAGDVYVDGKGIGDIGNVVLRDRKLLSEEGLVVVVVTIDYKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + G++ + + ++ + + L+ +I +L+ Sbjct: 479 KEVLAGPDILSRGF-IYMRESGELINDAQQVMTKSLNKSLANDKVTEQSLKNTIIESLKP 537 Query: 537 LLKKVWGKKPLV 548 L + + P++ Sbjct: 538 FLFERTERHPMI 549 >gi|282882823|ref|ZP_06291428.1| ribonuclease J 1 [Peptoniphilus lacrimalis 315-B] gi|281297234|gb|EFA89725.1| ribonuclease J 1 [Peptoniphilus lacrimalis 315-B] Length = 553 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 187/560 (33%), Positives = 310/560 (55%), Gaps = 12/560 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN +L +PLGG+ EIG NM + Y I++DCG++FP+D++ G+D+V PD+T Sbjct: 1 MKNSNKLKIIPLGGLHEIGKNMTVIEY----RDDIIIVDCGMTFPEDEMLGIDVVIPDVT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ + + + +TH HEDH GA+ + L + +Y +P IGLLE K +SKK Sbjct: 57 YLVENKNRIRGLVLTHGHEDHIGAIPYVVKKLDMDIYGTPLTIGLLENKYKEHNLSKKRL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD V +G +E +RV+HSIP++ AL I++P+G + H+GD+K+D I G D Sbjct: 117 HVVNA-GDTVKLGKMEVEWIRVDHSIPDSTALAIKTPLGYVYHSGDFKIDMTPISGKPID 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSSSVS 238 + IG +G++A++ +STN +REG +SE + + + + +++ TF+S+V Sbjct: 176 LARISEIGRKGVVAMIGESTNVLREGYTMSESKVGETFNRLFMQLTENRIIIATFASNVH 235 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ II+ AE+ GR++VL G S+ V AI +G +K K F+ Y +L++I Sbjct: 236 RVQQIINSAEKYGRRVVLSGRSMVNVTETAIRLGQLKVKKGTFVDIRDMSKYDDSELVLI 295 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL +++ GE R ++L D +I S+ IPGNE + + NRL+E G VI Sbjct: 296 TTGSQGEPMSALTRIAYGEHRKIRLTPNDAIILSANPIPGNETDVSKVINRLLESGAEVI 355 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E +HVSGH +LK + + P+ + HGE H + H E+A Q GI + Sbjct: 356 YETL-SEIHVSGHACQEELKLILNLVNPKYFIPAHGEVRHQMKHAEIAEQMGIKPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG L + D +++ +V G L DG IG ++ + R+ L+ G + V V + + Sbjct: 415 MENGNCLEIGQDGAKLVGDVPSGNVLVDGLGIGDVGNIVLRDRKHLAEDGLVIVVVSISS 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + V + + + KD L+ I L+ Sbjct: 475 SGEIISGPDIISRGF-VYVRESGDLIEDSKSVVKKVLDSSTKKQLKDWTTLKTEIREELK 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S + + + P++ I ++ Sbjct: 534 SFIFQATKRNPMILPIIMEV 553 >gi|331701098|ref|YP_004398057.1| ribocuclease J [Lactobacillus buchneri NRRL B-30929] gi|329128441|gb|AEB72994.1| Ribocuclease J [Lactobacillus buchneri NRRL B-30929] Length = 561 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 172/556 (30%), Positives = 275/556 (49%), Gaps = 10/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I+ID G+ FP+DDL GVD V PD ++ Sbjct: 7 KNNEAAIYGVGGLGEIGKNT----YGIQFQDEIILIDAGIKFPEDDLLGVDYVIPDYQYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + A+ ITH HEDH G + L L+VP+YA P A+ L++ K + + Sbjct: 63 VENKDKIKALVITHGHEDHIGGVPYLMKVLNVPIYAGPLAMALIKNKLEEHGLLNSVELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + R HSIP+T+ + + +PVG IV TGD+K D + D Sbjct: 123 EISDKSVLKFRKMKVSFFRTTHSIPDTVGIAVHTPVGVIVETGDYKFDLTPVTNQPPDLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+L LM DSTNA + SEK + +I I N + ++ TF+S++SRI+ Sbjct: 183 EMARLGAEGVLCLMSDSTNAEKPIWTKSEKWVGTSIAHIFDNIEDRIIFATFASNISRIK 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D A GRKI + G S+ + ++G + D F+ P + +++ TG Sbjct: 243 TACDNAMAHGRKIAVFGRSMDAAIVNGRELGYLDIPDDAFVDAHELQSLPANKTLILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N+L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTTSVNSVINKLEEAGANVIHGR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA Q G+ ++N Sbjct: 363 VN-NIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFIMQN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L D + G DG IG ++ + R+ LS G + V ++ + Sbjct: 422 GDVLALSKDNARMAGHFTAGDVYIDGSGIGDVGNVVLRDRQLLSEEGIVVVVATINLANQ 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G++ + V T+ + ++ +R +I L+ Sbjct: 482 EIQSGPDILSRGF-VYMRESGELLDEGRRRVFKTIRKSMRAKKATESSIRNAIIDDLQEF 540 Query: 538 LKKVWGKKPLVTVFIN 553 L + P++ + Sbjct: 541 LYDKTERHPMILPMLI 556 >gi|332524058|ref|ZP_08400310.1| ribonuclease J 1 [Streptococcus porcinus str. Jelinkova 176] gi|332315322|gb|EGJ28307.1| ribonuclease J 1 [Streptococcus porcinus str. Jelinkova 176] Length = 561 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 275/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVSVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 62 IVDNIDRVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDSKM 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 122 YEINHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKDYHANEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE H LA GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMQKVHAGLAEDTGIPEENIFILE 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFET 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKEASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I ++ Sbjct: 539 FLFEKTEREPIIIPMILTPDKE 560 >gi|238063404|ref|ZP_04608113.1| beta-lactamase [Micromonospora sp. ATCC 39149] gi|237885215|gb|EEP74043.1| beta-lactamase [Micromonospora sp. ATCC 39149] Length = 562 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 292/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+G IG NM ++ Y K +++DCGV FP + PGVDL+ PD I+ Sbjct: 19 LRIIPLGGLGAIGRNMTVFEY----DGKLLIVDCGVLFPDVEQPGVDLILPDFGPILDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S F + L+EAK R+ + + Sbjct: 75 ADVQAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSQFTLALVEAKLAERRIQPYTLTV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD Sbjct: 133 EGGRERLGPFECEFFAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDGRITDLAGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ L+ DSTNA G E+ I + I A+G ++V +F+S V R++ + Sbjct: 193 RLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKARGRIIVASFASHVHRVQQVF 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G++ L +S E P E++++++TGSQG Sbjct: 253 DSAAEHGRKVALIGRSMVRNMGIARDLGLLNIPAGLVISIEEATALPPERIVLMSTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++ G+ R++ +A DTV+ +S +PGNE ++ + NRL G V+ +D Sbjct: 313 EPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLARAGAVVVHKDV-A 371 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L + RP L+ +HGE HL AH L ++ G+A V +G + Sbjct: 372 KVHVSGHAPAGELLYLLNVTRPSNLMPVHGEWRHLRAHARLGIESGVAPDRVVLCEDGDV 431 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L ++ V DG +G ++ + +RR L G ++ V++D+ + Sbjct: 432 VDLVEGRASLVGHVKSRYVYVDGLAVGDVSESLLTERRILGDGGFIATTVVVDSVTGKVV 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P + G + L+ + + D D L++ + + + Sbjct: 492 GGPTVSAKGFSEDPTAFNPVIPLVTEALNRAAAD----GITDPHQLQQIVRRTVGRWVND 547 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 KYRRRPMIVPTVVEV 562 >gi|182683094|ref|YP_001834841.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|182628428|gb|ACB89376.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] Length = 559 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAIKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|163732039|ref|ZP_02139485.1| metallo-beta-lactamase family protein [Roseobacter litoralis Och 149] gi|161394337|gb|EDQ18660.1| metallo-beta-lactamase family protein [Roseobacter litoralis Och 149] Length = 555 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 191/557 (34%), Positives = 314/557 (56%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG P++ + I++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGKPNAERLIVVDMGVAFPDMDGSPGVDLILPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R + A+F+THAHEDH GA+ + L P+YA F + K + Sbjct: 61 WLQERRDRIEAVFVTHAHEDHVGAVAHTYERLGAPIYARAFTANIARRKMAEHGHPEDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V G F + + ++HSIPE+ A+VI +P G ++H+GD+KLD+ ++G+ D Sbjct: 121 HTVSPWPETVSAGPFQVSFLPISHSIPESSAMVIDTPEGRVIHSGDFKLDETPLVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +G+ AL+CDSTN + SE + I ++++A+G V+ TTF+S+V+R Sbjct: 181 PELWAEVSKDGVKALICDSTNVFSQHPGRSEASVGPEITKLVQSAQGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ D + GR IVL+G +++R++ + + G+++ +S E PRE L+++ T Sbjct: 241 VKTLADAGVRAGRSIVLMGRAMRRMIEASAETGVLQDFPSVVSPEEAKSIPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ + +++ E D +FSS+ IPGNE + I N E GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYQGMEMKEGDLFLFSSKTIPGNEKGVIRIINAFSELGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+R+ + + PQV++ +HGE HL H ++A Q G V NG Sbjct: 360 DSSGLYHVSGHANRPDLERLSEIVNPQVVIPMHGEHRHLREHVKIAEQNGRTGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + +I + V G DG + D + R +++ GH+ V +++D Sbjct: 419 MMVDLSGNKPKIAEYVETGRTYLDGTVQIGALDGVVRDRIRMALNGHVVVTLIVDEDDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+P + +L + + +D L E + +R + Sbjct: 479 LGDPWCELKGLPETGRSKASLVDVLEADLGQWLGRADPKTMRDDDRLNEGLRRVVRQTSQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP V+V ++++S Sbjct: 539 DEIGKKPEVSVIVSRLS 555 >gi|81428702|ref|YP_395702.1| metallo-beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78610344|emb|CAI55393.1| Putative hydrolase, metallo-beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 562 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 168/563 (29%), Positives = 272/563 (48%), Gaps = 11/563 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG NM YG + I+ID G+ FP+D+L G+D V D + Sbjct: 5 IKNNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDELLGIDYVISDYQY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + K ++ + A+ ITH HEDH G L + +VPVYA P A+ L+ K + + Sbjct: 61 LQKNQQKIKALVITHGHEDHIGGLPFFLQQVPNVPVYAGPLALALIRGKLEEHGLLRSTE 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S++ R HSIP+T+ + I +P G +V TGD+K D + Sbjct: 121 LHEINEDTVLKFRKTSVDFFRTTHSIPDTLGVAIHTPQGVVVETGDFKFDLTPVGNQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+L LM DSTNA SE+ + +I I++ +G ++ TF+S++S Sbjct: 181 NLQKMARLGEEGVLCLMSDSTNAEVPNFTKSERFVGDSIRHIVERIEGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ D A GRKI + G S++ V ++G + D+ + P +++++I Sbjct: 241 RVSQATDAAIANGRKIAVFGRSMEAAVVNGRELGYLNIPDEALVDASQLNSLPADKVMII 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTV+FSS IPGN ++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVVFSSNPIPGNTTSVNHVINKLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +H SGH + K M + ++P+ + HGE H ELA Q G+ Sbjct: 361 HGKVN-NIHTSGHGGQEEQKLMLRLMKPKFFMPCHGEYRMQKIHTELAQQCGVEPDNCFI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG +L L D + DG IG ++ + R+ LS G + V ++ Sbjct: 420 LENGDVLALTADSAHVAGHFSADDVYVDGNGIGDIGNVVLRDRKMLSEEGLVVVVATINF 479 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 NI P+I+ G G I + + V + +RE+I L Sbjct: 480 GEKNILAGPDILSRGFVYMRESGELISEAQRRVFRMIVNTFNANDKVTENQVREAIIDGL 539 Query: 535 RSLLKKVWGKKPLVTVFINKISR 557 + L + + P++ I + + Sbjct: 540 QDFLFEKTERHPMILPMIIQSNE 562 >gi|322390305|ref|ZP_08063834.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321143036|gb|EFX38485.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 560 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK + Y +++++ T Sbjct: 240 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPAGTIIEPNEIKDYAANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRESQRILFNAIRIALKNKDANIQTVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 538 FLYESTEREPIIIPMIL 554 >gi|262202124|ref|YP_003273332.1| beta-lactamase [Gordonia bronchialis DSM 43247] gi|262085471|gb|ACY21439.1| beta-lactamase domain protein [Gordonia bronchialis DSM 43247] Length = 595 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 177/556 (31%), Positives = 292/556 (52%), Gaps = 16/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ Y + +++DCGV FP+D PGVDL+ PD +I Sbjct: 50 LRVVALGGIGEIGRNMTVFEY----DGRLLIVDCGVLFPEDAQPGVDLILPDFRYIEDRM 105 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+EAK R+ ++ + + Sbjct: 106 DDVDAVVLTHGHEDHIGAIPFLLRLRGDIPVVGSKFTLALVEAKCREHRLRPRL--VEVR 163 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ G F E VNHSIP+ +A+ IR+P G +HTGD KLD + G +TD Sbjct: 164 EGERTTHGPFDCEYFAVNHSIPDAIAVAIRTPAGLALHTGDIKLDQLPLDGRLTDLAGFS 223 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I + ++ A+G V+V +F+S V RI+ II Sbjct: 224 RLGDEGVDLFLVDSTNAEVPGFVTPERQIGGVLDQVIGKARGRVIVASFASHVHRIQQII 283 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A R+I +G S+ R + +A D+G + D + + ++ P ++++I+TGSQG Sbjct: 284 DVAHTHNRRITFVGRSMVRNMQIAQDLGYLHVPDGVEVDMDTAATLPDHRVVLISTGSQG 343 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + D V+ +S IPGNE ++ + N L + G VI + + Sbjct: 344 EPLSALSRMARGEHRQINIRPADLVVLASSLIPGNENSVFAVVNGLAKLGATVITQQS-A 402 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP + +HGE HL A+ LA+ G+ V +G + Sbjct: 403 KVHVSGHASAGELLYLYNAVRPSNAMPVHGEWRHLRANAALAVATGVPEDRVVLAEDGVV 462 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L EI+ V G DG +G + +++R L G +++ V ++ Sbjct: 463 VDLVDGRAEIVGRVPVGHVYVDGLSVGDVGESTLSERLVLGEGGFIAITVAVNTATGKAV 522 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ G D K + V T+ L D + ++I A+ + Sbjct: 523 STPEVSGRGFS----DDPGALKEAAELVNQTLDALAAEGVTDTHRIAQTIRRAVGRWVAD 578 Query: 541 VWGKKPLVTVFINKIS 556 + ++P++ + ++ Sbjct: 579 TYRRRPMIVPTVLAVN 594 >gi|332364808|gb|EGJ42577.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1059] Length = 560 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGINGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPASEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASIQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|306828721|ref|ZP_07461913.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] gi|304428899|gb|EFM31987.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] Length = 560 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|111023706|ref|YP_706678.1| hypothetical protein RHA1_ro06748 [Rhodococcus jostii RHA1] gi|110823236|gb|ABG98520.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 664 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 174/555 (31%), Positives = 291/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP+D PGVDL+ PD I Sbjct: 115 LRVVALGGIGEIGRNMTVFEH----QGKLLIVDCGVLFPEDQQPGVDLILPDFRHIEDRM 170 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ AK R + + Sbjct: 171 ADVEAVVLTHGHEDHIGAIPFLLRLRPDLPVVGSRFTLALVAAKCREHRQRPNLVEVV-- 228 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + D G F E VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD Sbjct: 229 EGQRTDHGPFQCEYFAVNHSIPDAIAVAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFS 288 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I + +++ AK V+V +F+S V RI+ ++ Sbjct: 289 RLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVV 348 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + R++ +G S+ R + +A D+G + D L + ++ P ++L++I+TGSQG Sbjct: 349 DVAHRYNRRVAFVGRSMVRNMQIAQDLGYLTVPDGLVVDIDTAANLPDDRLVLISTGSQG 408 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + D V+ +S IPGNE ++ + N L ++G V+ + + Sbjct: 409 EPLSALSRMARGEHRQINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQS-A 467 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP + +HGE HL A+ LA G+ + +G + Sbjct: 468 KVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEDRIVLAEDGVV 527 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + + EI+ +V G DG +G D ++ R L G +++NV++D+H Sbjct: 528 VDMVDGLAEIVGQVPVGHVYVDGLSVGDVGDSTLSDRLVLGEGGFIAINVVIDDHTGRAV 587 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ G D K + V ++ L D + ++I + + Sbjct: 588 STPEVSGRGFS----DDPTALKDAAQLVEAELLRLATEGINDAHRIAQAIRRVVGKWVAD 643 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 644 KYRRRPMIVPTVIAV 658 >gi|307705798|ref|ZP_07642642.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307620657|gb|EFN99749.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 559 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|307710237|ref|ZP_07646680.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307618999|gb|EFN98132.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 559 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + AI ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAILITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|327439403|dbj|BAK15768.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Solibacillus silvestris StLB046] Length = 554 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 171/558 (30%), Positives = 299/558 (53%), Gaps = 13/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM + YG ++ +++DCG F L GVDL+ PD++++ Sbjct: 5 ENTLSIFALGGINEIGKNMYVIEYG----QELVIVDCGGKFADQSLLGVDLIIPDLSYLE 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + A+ +TH HEDH G + L +++P+YAS F +GL+E K ++ + I Sbjct: 61 ENKHKIKALVVTHGHEDHIGGIPYLLRKINMPIYASRFTLGLIELKLKEHKLLRNTELIE 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A K++ S+ + +HSIP+ + +V +P G ++HTGD+K D + +D Sbjct: 121 INAESKINFDQLSLTFFKTSHSIPDCLGIVFHTPEGKVIHTGDFKFDFTPVNDQPSDIHK 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G EG+LAL+ +STNA R G SE+ I ++ + + A G + ++TF+S+V+RI+ Sbjct: 181 MAALGTEGVLALISESTNAERPGFTPSEQVIGGHLDEEFQKATGKIFISTFASNVNRIQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 I++ A++ RKIVLLG S+ V SVA+ +G + + P E+ +++ TGS Sbjct: 241 IVEAAKKTNRKIVLLGRSMVNVTSVAMRLGNLDIPGWMLIEPRELKELPPERAVILCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++LS G R+VK+ + DTVIF++ IPGNE + I + L + G +V+ ++ Sbjct: 301 QGEPLAALSRLSTGRNRDVKVVQGDTVIFAASPIPGNEKDVSKIVDNLFQLGAKVVYGNS 360 Query: 362 E-CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH Y DLK M ++P+ + IHGE L H+ LA G+ ++N Sbjct: 361 SITGMHVSGHGYQEDLKMMLTLMKPKYFIPIHGEYRMLHIHRSLAEAVGVEKGHTFILKN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G+++ + + G DG + ++ + R+QLS G L + V + Sbjct: 421 GEIVDIKGGEARQTRAIPAGDTYVDGTGSDEVGEIVLRDRKQLSEDGMLVIVVTISKFDG 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+ + G Y + + + + + V + + +++++ A+ Sbjct: 481 SIISGPDSISRGF-VYARESEGLINDINEIAQSAVENFKEANPF---AMKKAVKHAVDQY 536 Query: 538 LKKVWGKKPLVTVFINKI 555 + + KKP++ I +I Sbjct: 537 IFTLKMKKPMILPIIIEI 554 >gi|322386213|ref|ZP_08059846.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] gi|321269793|gb|EFX52720.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] Length = 560 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKKEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFGS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|300814104|ref|ZP_07094387.1| putative ribonuclease J 1 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511761|gb|EFK38978.1| putative ribonuclease J 1 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 553 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 186/560 (33%), Positives = 309/560 (55%), Gaps = 12/560 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MKN +L +PLGG+ EIG NM + Y I++DCG++FP+D++ G+D+V PD+T Sbjct: 1 MKNSNKLKIIPLGGLHEIGKNMTVIEY----RDDIIIVDCGMTFPEDEMLGIDVVIPDVT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ + + + +TH HEDH GA+ + L + +Y +P IGLLE K +SKK Sbjct: 57 YLVENKNRIRGLVLTHGHEDHIGAIPYVVKKLDMDIYGTPLTIGLLENKYKEHNLSKKRL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD V +G +E +RVNHSIP++ AL I++P+G + H+GD+K+D I G D Sbjct: 117 HVVNA-GDTVKLGKMEVEWIRVNHSIPDSTALAIKTPLGYVYHSGDFKIDMTPISGKPID 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSSSVS 238 + IG +G++A++ +STN +REG +SE + + + + +++ TF+S+V Sbjct: 176 LARISEIGRKGVVAMIGESTNVLREGYTMSESKVGETFNRLFMQLTENRIIIATFASNVH 235 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ II+ AE+ GR++VL G S+ V A+ +G +K K + Y +L++I Sbjct: 236 RVQQIINSAEKYGRRVVLSGRSMVNVTETAVRLGQLKVKKGTLVDIRDMSKYDDSELVLI 295 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL +++ GE R ++L D +I S+ IPGNE + + NRL+E G VI Sbjct: 296 TTGSQGEPMSALTRIAYGEHRKIRLTPNDAIILSANPIPGNETDVSKVINRLLESGAEVI 355 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E +HVSGH +LK + + P+ + HGE H + H E+A Q GI + Sbjct: 356 YETL-SEIHVSGHACQEELKLILNLVNPKYFIPAHGEVRHQMKHSEIAEQMGIKPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG L + D +++ +V G L DG IG ++ + R+ L+ G + V V + + Sbjct: 415 MENGNCLEIGQDGAKLVGDVPSGNVLVDGLGIGDVGNIVLRDRKHLAEDGLVIVVVSISS 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + V + + + KD L+ I L+ Sbjct: 475 SGEIISGPDIISRGF-VYVRESGDLIEDSKSVVKKVLDSSTKKQLKDWTTLKTEIREELK 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S + + + P++ I ++ Sbjct: 534 SFIFQATKRNPMILPIIMEV 553 >gi|332364361|gb|EGJ42135.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK355] Length = 560 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGINGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|322375108|ref|ZP_08049622.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] gi|321280608|gb|EFX57647.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] Length = 559 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + AI ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAILITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|146317819|ref|YP_001197531.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|146320013|ref|YP_001199724.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|223933810|ref|ZP_03625779.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|253751069|ref|YP_003024210.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253752970|ref|YP_003026110.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253754793|ref|YP_003027933.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|302023240|ref|ZP_07248451.1| metallo-beta-lactamase superfamily protein [Streptococcus suis 05HAS68] gi|330832008|ref|YP_004400833.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis ST3] gi|145688625|gb|ABP89131.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 05ZYH33] gi|145690819|gb|ABP91324.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 98HAH33] gi|223897523|gb|EEF63915.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|251815358|emb|CAZ50929.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251817257|emb|CAZ54985.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251819215|emb|CAR44414.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|292557614|gb|ADE30615.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus suis GZ1] gi|319757325|gb|ADV69267.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis JS14] gi|329306231|gb|AEB80647.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis ST3] Length = 559 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 281/557 (50%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + +++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPHEVGVFAIGGLGEIGKNTYGIEY----KDEILIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 62 IVENLDRVKGLVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 122 HEINHNTELTFKHLKVSFFRTTHSIPEPLGIVVDTPQGKIVCTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I +++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKLIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 241 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNEIKEYPASEIMILCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN + + N L+E GV VI Sbjct: 301 GSQGEPMAALSRIAHGTHRQVQLQPGDTVIFSSSPIPGNTTGVNKLINILIEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHASLAVDTGVPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + + DG IG+ + RR LS G + +D N Sbjct: 420 NGDVLALTKDSARLAGQFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFNS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + + + +++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGELIRESQRVLFNAIRIAMRNKDANIQTVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|322377300|ref|ZP_08051792.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] gi|321282013|gb|EFX59021.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] Length = 559 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|315222363|ref|ZP_07864268.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315188524|gb|EFU22234.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 560 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 280/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K+EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKSEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRIKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+LAL+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLALLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKTPKGTFIEPNEIKDYPANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGIPKKNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRHSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|332638592|ref|ZP_08417455.1| mRNA degradation ribonuclease J1/J2enzyme [Weissella cibaria KACC 11862] Length = 559 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 166/559 (29%), Positives = 274/559 (49%), Gaps = 10/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ +E LGG+GEIG N +G + I++D GV FP+D+L G+D V PD T+ Sbjct: 7 IRPDETAVYALGGLGEIGKNTYGIQFG----DEIIVVDAGVKFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + R + A+ ITH HEDH GA+H + ++VPVYA P A+ L++ K + Sbjct: 63 LKENRDKIKALVITHGHEDHIGAIHFFLNAVNVPVYAGPLALALIKNKLDEHGLLNSTEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+E R HSIP+T + + +P G IV TGD+K D + Sbjct: 123 HEIDEDTVLKFDNMSVEFFRTTHSIPDTFGIAVHTPSGTIVETGDFKFDFTPTTKQPPNV 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG+EG+L LM DSTNA R SE+ + K I + G ++ TF+S++SR+ Sbjct: 183 QKMARIGSEGVLLLMSDSTNAERAEFSKSERWVGKTIDKLFDEIDGRIIFATFASNMSRV 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A GRKI + G S++ V+ + +G + ++ + P ++++++T Sbjct: 243 QMATEAALAHGRKIAVFGRSMESAVTNGLALGYLDIPKEMLVDAHEINHLPANEVLILST 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G + + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 303 GSQGEPMAALARIANGTHKQISIQPDDTVIFSSSPIPGNTQSVNRVINELEEAGATVIHG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE L H+ ++ + G+ + Sbjct: 363 KIN-NIHASGHGGQEEQKLMLSLIKPKYFMPVHGEYRMLKVHEGMSHEVGVPKENTFVLD 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + D + DG IG + R+ LS G + V +D + Sbjct: 422 NGDVLALTADSARVADHIPAEDTYVDGNGIGDVGSAVLRDRQMLSQDGLVVVVATIDLKN 481 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + K + ++ + +R ++ S L+ Sbjct: 482 QEITAGPDILSRGF-IYMRESEDLINEGRKEIFHAILTAMREPNASEHSIRNAVVSQLQR 540 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + ++PL+ I Sbjct: 541 FLYEKTKRRPLILPMFILI 559 >gi|256824790|ref|YP_003148750.1| hydrolase [Kytococcus sedentarius DSM 20547] gi|256688183|gb|ACV05985.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Kytococcus sedentarius DSM 20547] Length = 560 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 164/558 (29%), Positives = 289/558 (51%), Gaps = 17/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + + LGG+GE+G NM + YG K +++DCGV FP D PGVDL+ PD + Sbjct: 13 LPKNGVRVVALGGLGEVGRNMTVIEYG----GKLLIVDCGVLFPDDTQPGVDLILPDFEY 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +++A+ +TH HEDH GA+ L +P+ S + L+EAK +++ + Sbjct: 69 LDGRWDDIVAVVLTHGHEDHIGAVPYLLRNRQDIPIVGSKLTLALVEAKLKEHKITPRTL 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D + G F E V VNHSIP+ +A+ I +P G ++ TGD+K+D + G +TD Sbjct: 129 TV--REDDIENFGKFECEFVAVNHSIPDALAVFIHTPGGTLLITGDFKMDQLPLDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ + DSTNA G E+ I I + ++ ++ FSS + R Sbjct: 187 LRAFARLGEEGVDLFLTDSTNADVPGFTTPERNIAPAIERVFATSEKRIIAACFSSHIHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I+D A + GRK+ +G S+ R + +A ++G + D + + P Q+++I Sbjct: 247 VQQILDAAGKTGRKVAFVGRSMIRNMGIASEMGYLHVPDNVLVDVRKLAKLPPNQVVLIC 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ E DTV+ +S IPGNE ++ + N L++ G V+ Sbjct: 307 TGSQGEPMAALSRMANQDH-QIEVGEGDTVLLASSLIPGNEKSVYKVMNGLMKLGANVVH 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE H++A+ ELA Q G+ V Sbjct: 366 KG-NAMVHVSGHASAGELLYAYNIVKPKNVLPVHGEWRHMLANAELARQTGVPDENVVVA 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L I+ +V DG +G + + RR L G +S+ V+ D Sbjct: 425 EDGVVVDLVDGKARIVGQVPAAHVYVDGGNVGTSDEDLLKDRRILRDEGFVSIVVVRDPE 484 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I G+ +G KI + + V + + D+ L++ + A+ Sbjct: 485 TGKIISGPDIHARGVS----EGEKILQRAVPKVEQALEEARLKGTTDVHQLQQVVRRAMG 540 Query: 536 SLLKKVWGKKPLVTVFIN 553 + ++P++ + Sbjct: 541 GYIGGKLKRRPMIIPVVI 558 >gi|319946203|ref|ZP_08020443.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319747585|gb|EFV99838.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 560 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRGAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELTFKHIKATFFRTTHSIPEPLGIVLHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKIV+ G S+++ + I++G IK + YP +++++ T Sbjct: 240 QQAADAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPPGTIIEPSEIKDYPANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVDVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRESQRILFNAIRIALKNKDANIQTVHGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYESTEREPIIIPMILTPDEE 559 >gi|319939992|ref|ZP_08014346.1| metallo-beta-lactamase superfamily protein domain-containing protein [Streptococcus anginosus 1_2_62CV] gi|319810706|gb|EFW07033.1| metallo-beta-lactamase superfamily protein domain-containing protein [Streptococcus anginosus 1_2_62CV] Length = 560 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 280/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRIKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+LAL+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLALLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKTPKGTFIEPNEIKDYPANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGIPKKNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGELIRHSQRILFNAIRIALKNKDASIQSVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|89101083|ref|ZP_01173921.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] gi|89084195|gb|EAR63358.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] Length = 557 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 279/560 (49%), Gaps = 11/560 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + + LGGVGEIG NM L +ID G+ FP++++ G+D+V PD++++ Sbjct: 5 KNESIRLIALGGVGEIGKNMYLAE----VDEDLYVIDAGLMFPENEMLGIDIVIPDVSYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + IF+TH HEDH GAL + + VPVY + + L +AK + K I Sbjct: 61 VQNKDRIRGIFLTHGHEDHIGALSYVLKKVSVPVYGTKLTLALAKAKMKEQDYRGKAELI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++ S+ R NHSIP+++ + I + G+IV+TGD+K D A + Sbjct: 121 EINSDSVLEFEHSSVSFFRTNHSIPDSVGICIHTSEGSIVYTGDFKFDQAAPELYKAEIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+ G+L L+ DST+A R G SE ++K + +AKG V+ F+S + +I+ Sbjct: 181 KMAGIGDNGVLCLLSDSTDAERPGYSTSEAVVQKAMAHAFYSAKGRVIAACFASDLIQIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I D AE+ GRK+ + G S+++V +A+ +G + KD + + G + +++++ G Sbjct: 241 HIFDAAEESGRKVAVAGKSIQKVYDLAVQLGYLAVKDDILIPLSELGSFRDHEVVILTAG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP AL ++++ R V + E DTV ++ I G EV I + L G VI Sbjct: 301 SQGEPIEALQKMAKRTHRQVTIQEGDTVYLAAAPIRGGEVFIYKTMDMLYRAGATVITGK 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 S H +LK M ++P+ + +HGE L +H +LA + GI+ + Sbjct: 361 NSA--TASSHGSQEELKFMINLMKPKHFIPVHGEYKTLKSHGKLAAECGISQDSILIPEK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + I+ V G L DG +G ++ + RR LS G L V V L+ H Sbjct: 419 GDVFEIKDGRIKQSGRVPAGNVLIDGIGVGDVGNIVLRDRRLLSQDGILIVVVTLNRHDK 478 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + K+ V V Q D +++ + L Sbjct: 479 QIAAGPEIISRGF-VYVRESEKLLVQAADMVKEIVHRGSQKESFDWAAVKQDMRDELNQF 537 Query: 538 LKKVWGKKPLVTVFINKISR 557 + ++P++ I ++ + Sbjct: 538 FYEKTKRRPMILPIIMEVKQ 557 >gi|312867561|ref|ZP_07727769.1| ribonuclease J 1 [Streptococcus parasanguinis F0405] gi|311096967|gb|EFQ55203.1| ribonuclease J 1 [Streptococcus parasanguinis F0405] Length = 560 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK + Y +++++ T Sbjct: 240 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPAGTIIEPNEIKDYAANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRESQRILFNAIRIALKNKDANIQTVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 538 FLYESTEREPIIIPMIL 554 >gi|296875742|ref|ZP_06899806.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] gi|296433238|gb|EFH19021.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] Length = 559 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK + Y +++++ T Sbjct: 240 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPAGTIIEPNEIKDYAANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRESQRILFNAIRIALKNKDANIQTVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 538 FLYESTEREPIIIPMIL 554 >gi|324992189|gb|EGC24111.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK405] Length = 560 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 538 FLYESTEREPIIIPMVLTPDEE 559 >gi|323356760|ref|YP_004223156.1| hydrolase of the metallo-beta-lactamase superfamily [Microbacterium testaceum StLB037] gi|323273131|dbj|BAJ73276.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Microbacterium testaceum StLB037] Length = 558 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 292/555 (52%), Gaps = 17/555 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L PLGG+GE+G NM ++ Y K +++DCGV FP++ PGVDL+ PD I Sbjct: 15 TLRVFPLGGLGEVGRNMTVFEY----EGKLLVVDCGVLFPEEHQPGVDLILPDFEPIKHR 70 Query: 65 RKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++ + +TH HEDH GA+ L +P+ S + L+EAK R+ + Sbjct: 71 LDDIVGVVLTHGHEDHIGAVPYLLKLKGDIPLIGSGLTLALIEAKLKEHRIRPYTLTV-- 128 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G + VG F +E V VNHSIP+ +A+ IR+P G ++ TGD+K+D + G +TD + Sbjct: 129 KEGQREQVGPFDLEFVAVNHSIPDALAVAIRTPAGMVLATGDFKMDQLPLDGRITDLRAF 188 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+ + DSTNA G +E+GI + ++ A V+V +FSS V R++ + Sbjct: 189 ARLGEEGVDLFLVDSTNADVPGFTPTERGIGPVLDQVIAKAPRRVVVASFSSHVHRVQQV 248 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A GR++ LLG S+ R + +A D+G + D + + + P ++++ ++TGSQ Sbjct: 249 LDAAHANGRRVALLGRSMVRNMGIAADLGYLNVPDGVLIDYKKARDLPDDKIVYMSTGSQ 308 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L++++ + ++ E DT+I +S IPGNE AI + + L + G V+ + Sbjct: 309 GEPMAVLSRMANLDHA-IEPGEGDTIILASSQIPGNENAIYRVIDGLTKLGATVVHKG-N 366 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +L Y ++P+ ++ +HGE HL+A+ +LA + GI NG Sbjct: 367 AKVHVSGHAAAGELLYCYNILKPKNVLPVHGEYRHLMANAKLAQETGIPEQNTILGENGT 426 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 ++ L ++ ++ G DG +G D + RR L G +SV V++D+ I Sbjct: 427 VVDLRDGVASVVGQLDIGFVYVDGSSVGAITDADLKDRRILGEEGFISVIVVVDSATGRI 486 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G+ + + + + + + + Q +D L + + + + Sbjct: 487 VSGPDIHARGVA----ENDSVFESVKPKIAAALTEAAQSGVRDNHALSQVVRRTIGRWVN 542 Query: 540 KVWGKKPLVTVFINK 554 + ++P++ I + Sbjct: 543 QSLRRRPMIVPLIIE 557 >gi|313889855|ref|ZP_07823497.1| ribonuclease J 1 [Streptococcus pseudoporcinus SPIN 20026] gi|313121900|gb|EFR44997.1| ribonuclease J 1 [Streptococcus pseudoporcinus SPIN 20026] Length = 561 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 275/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDSKM 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 122 YEINHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKDYHANEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVALQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE H LA GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMQKVHAGLAEDTGIPEENIFILE 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFDT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKEASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I ++ Sbjct: 539 FLFEKTEREPIIIPMILTPDKE 560 >gi|90423920|ref|YP_532290.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90105934|gb|ABD87971.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 556 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 249/555 (44%), Positives = 362/555 (65%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL F PLGGVGEIGMN+ LYG G S RKW+ +D GVSF ++ PG+DL+ PDI F Sbjct: 3 RPDELTFAPLGGVGEIGMNLYLYGIGKGSQRKWLAVDLGVSFGDEEHLPGIDLIMPDIRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KERKNL+ + +TH HEDH+GA+ DLW L P+YA+ F+ L AK ER KIP Sbjct: 63 LEKERKNLVGLVLTHVHEDHFGAILDLWPKLKCPIYATQFSAALFRAKCEAERNPPKIPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G KVD+G F++E + V HSIPE AL IR+ VG ++HTGDWK+D I+G TD+ Sbjct: 123 TVVPSGGKVDLGPFNVEFIPVAHSIPEAHALAIRTSVGVVLHTGDWKIDKTPIIGKPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+REGT SE + K + +++KNAKG V VTTF+S+VSR+ Sbjct: 183 RRLRELGDEGVLALIGDSTNAVREGTSPSETEVAKTLAELVKNAKGRVAVTTFASNVSRL 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A +GR++V++G +++RVV VA + G + Q F + +G +P ++++ + TG Sbjct: 243 RAVADAARAVGREVVVVGRAMERVVQVARESGYLDGVQNFRGADLYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++ + V L + D VIFSSR IPGNE ++G I N L++QG+ VI + Sbjct: 303 SQGEPRAALARIANDDHPQVTLNKGDCVIFSSRTIPGNEKSVGGIINGLIKQGIEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA G+ V NG Sbjct: 363 TH-LVHVSGHPRRDELREMISWVRPQLLIPVHGEALHLFEHAKLARACGVPKVLTCVNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P II+++ G KDG ++ + +RR+++F G V + LD + Sbjct: 422 LVRLGPGDPAIIEQIPSGRLYKDGNILEDAKSRAVVERRKIAFAGCAFVAIALDAKGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP + G + L+ + VI+TV LP+ +R+D + ES+ A+RS L + Sbjct: 482 DDPEVELVGIPEKNTAGEPLDDLVFELVISTVETLPKAKRRDPDAVGESVRRAVRSALNE 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL V + + Sbjct: 542 QWGKKPLCYVHVLTV 556 >gi|329116843|ref|ZP_08245560.1| ribonuclease J 1 [Streptococcus parauberis NCFD 2020] gi|326907248|gb|EGE54162.1| ribonuclease J 1 [Streptococcus parauberis NCFD 2020] Length = 560 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 162/557 (29%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP++DL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEEDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDTTL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G +V TGD+K D + D D Sbjct: 122 YEINHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFDFTPVG-DPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G I + Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYINVPKGTIIEPNELKNYHANEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINAIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE H LA+ G+ + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMQKVHAGLAMDTGVPKENIFILE 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDTARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFKS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKEASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|84502632|ref|ZP_01000751.1| metallo-beta-lactamase family protein [Oceanicola batsensis HTCC2597] gi|84389027|gb|EAQ01825.1| metallo-beta-lactamase family protein [Oceanicola batsensis HTCC2597] Length = 556 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 199/557 (35%), Positives = 310/557 (55%), Gaps = 4/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M NE L++LPLGG GEIGMN +YGYG+P + I++D GV+FP D PGVDL+F DI+ Sbjct: 1 MSNERLIYLPLGGAGEIGMNAYVYGYGAPGEERLILVDIGVTFPDMDTTPGVDLIFADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKI 118 ++ + + L A+FITHAHEDH GA+ L+ L P +YA F + K V Sbjct: 61 WLEERKDRLEAVFITHAHEDHVGAVGHLYERLGAPKIYARAFTTNIARGKLAEYGVGDNA 120 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++ D+++ G F + + ++HSIPE+ ALVI SP G ++HTGD+KLD D ++G+ Sbjct: 121 VTVANAWPDRIEAGPFRVGFLPISHSIPESSALVIDSPEGRVIHTGDFKLDTDPVVGEAF 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D++ + G+ AL+CDSTN SE + I ++ + G + TTF+S+V+ Sbjct: 181 DEELWSDVAAPGVRALVCDSTNVFSGHPGRSESTVGSEITALVNRSTGMFVATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + GR I LLG +++R++ A+ G++ +S E PRE L++I Sbjct: 241 RVKTLAEAGIAAGRSICLLGRAMRRMIEAAVQTGVLSDFPSVVSPEDARNIPRENLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQLSRG+ + L E DT +FSS+ IPGNE + I N E GV V+ Sbjct: 301 TGSQGERRAASAQLSRGKHLGIALKEGDTFLFSSKTIPGNERDVIRIINAFSEMGVDVV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +D+ HVSGH DL++++ + PQ +V +HGE HL H +LA + + N Sbjct: 360 DDSSGLYHVSGHANRPDLEKLHALVDPQFIVPMHGEHRHLREHAKLADRNRRKGI-LAVN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G M+ L + EI+D V G DG + D + R +++ GH++V V+LD Sbjct: 419 GTMVSLSGNAPEIVDYVETGRTYLDGSVQIGALDGIVRDRIRMALNGHVTVTVVLDEEDE 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G P +G+P + +L + + + D + E++ +R Sbjct: 479 PLGEPWCDLMGLPEIGRSRAPLQDVLEEDLSQFLNRAGTATMTDDDKIEEALRRTVRQTA 538 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VT+ ++++ Sbjct: 539 QNEIGKKPEVTIVVSRL 555 >gi|254453732|ref|ZP_05067169.1| metallo-beta-lactamase family protein [Octadecabacter antarcticus 238] gi|198268138|gb|EDY92408.1| metallo-beta-lactamase family protein [Octadecabacter antarcticus 238] Length = 550 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 201/550 (36%), Positives = 303/550 (55%), Gaps = 2/550 (0%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERK 66 +LPLGG GEIGMN +YGYG + + I++D GV+FP D PGVDL+ PDI+++ + Sbjct: 2 YLPLGGAGEIGMNCYVYGYGPADAERLIVVDLGVTFPDMDGTPGVDLILPDISWLAARKS 61 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + AIFITH HEDH GA+ L+ L P+YA F L K S K + Sbjct: 62 QIEAIFITHGHEDHVGAVGHLYERLGAPIYARAFTANLARRKMSEHGFSDKTVKTVGKWP 121 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + V VG F + V ++HSIPE+ LVI S G I+HTGD+K+D + +G+ D D ++ Sbjct: 122 ETVKVGPFEVGFVPISHSIPESSGLVIDSKGGRIIHTGDFKIDVEPGIGEPFDYDLWASL 181 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G +G+ AL+CDSTN SE + I + NAKG V TTF+S+VSR+R+I Sbjct: 182 GKDGVKALVCDSTNVFSREEGRSESTVGPEIEKFLINAKGMVAATTFASNVSRVRTIALA 241 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 AE+ GR + LLG S++R+V A +VGI+ + E G PRE ++++ TGSQGE R Sbjct: 242 AERAGRSVCLLGRSMRRMVEAATEVGILNDFPHVIPPEEVGNLPRENVLLLVTGSQGERR 301 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +A AQL+ G+ + + E DT +FSS+ IPGNE + HI N+ E GV V+ + + H Sbjct: 302 AASAQLANGKYMGITMREGDTFLFSSKTIPGNEKGVIHIMNQFSELGVDVVDDSSGGLYH 361 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGH DL M I+PQ L+ +HGE HL H + G+ V NG M+ L Sbjct: 362 VSGHANRPDLDTMRDLIKPQTLIPMHGEHRHLREHVNIGEAAGVQGV-LAVNGMMVDLSG 420 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIV 486 + ++++ + G DG + D + R +++ GH+ V +++D + + G P Sbjct: 421 NKAKVVEHIETGRMYLDGSVKVGQFDGVVRDRIRMALNGHVIVTLIIDENGDPMGDPWCE 480 Query: 487 DIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 +G+P + + +L + + + D + L + + + R GKKP Sbjct: 481 IMGLPKQGRNNAPLVDVLEEDLSQFLGRANDRTLADDEKLEKELRTIARKTAYSEIGKKP 540 Query: 547 LVTVFINKIS 556 VTV I++++ Sbjct: 541 EVTVVISRLA 550 >gi|289168787|ref|YP_003447056.1| hydrolase [Streptococcus mitis B6] gi|288908354|emb|CBJ23196.1| hydrolase [Streptococcus mitis B6] Length = 559 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|254512322|ref|ZP_05124389.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium KLH11] gi|221536033|gb|EEE39021.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium KLH11] Length = 555 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 202/556 (36%), Positives = 314/556 (56%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+F DI+ Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGEPGQERLILVDLGVAFPDMDSSPGVDLIFADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L AIF+THAHEDH GA+ + L P+YA F + K + Sbjct: 61 WLKERADRLEAIFVTHAHEDHVGAVAHCYEALGAPIYARAFTANIARRKMDEHGHPTEAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +++ VG FS+ + V+HSIPE+ LVI +P G +VHTGD+KLD D I+G+ D Sbjct: 121 RTASAWPEQIKVGPFSVGFLPVSHSIPESAGLVIETPAGRVVHTGDFKLDADPIVGEPFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D + G+ AL+CDSTN SE + I ++K A G V+ TTF+S+V+R Sbjct: 181 PDLWAEVAKPGVKALICDSTNVFSSHPGRSESEVGPEITRLVKEASGMVIATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR +VLLG +++R++ A + GI+ +S E PR L++I T Sbjct: 241 VKTLAEAGQNAGRSVVLLGRAMRRMIEAATETGILGDFPKVISPEEAQEVPRANLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R +++ E D +FSS+ IPGNE + I N+L E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYRGLEVKEGDLFLFSSKTIPGNERGVIRIMNQLSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL++++ + PQ++V +HGE HL H +LA G + NG Sbjct: 360 DSAGLYHVSGHANRPDLEKIHALVDPQMIVPMHGEHRHLREHAKLAEAGGRTGI-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ML L + +++D V G DG + D + R +++ GH+++ V+LD Sbjct: 419 TMLDLTGNAPKVVDYVETGRTYLDGTVKIGALDGVVRDRIRMALNGHVTITVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+P + ++L + + ++ +D L E + R + Sbjct: 479 LGEPWCDTMGLPEMGSSRAGLVEVLEEDLNQFLMRAGAKTLRDDDKLEEGLRRIARQTAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 539 AEIGKKPEVTVVVSRM 554 >gi|260905165|ref|ZP_05913487.1| RNA-metabolising metallo-beta-lactamase [Brevibacterium linens BL2] Length = 548 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 293/558 (52%), Gaps = 17/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M E + + LGG+GE+G NM ++ Y K +++DCGV FP++D PGVDL+ PD + Sbjct: 1 MDAEAVRIVALGGLGEVGRNMTVFEY----HGKLLIVDCGVLFPEEDQPGVDLILPDFAY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +++ + +TH HEDH GA+ L +P+ S I L+EAK R+ K Sbjct: 57 LDDRLDDIVGLVLTHGHEDHIGAVPYLLRRRADIPILGSKLTIALIEAKLKEHRI--KPI 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D +G F +E V VNHSIP+ +A+ IR+ GNI+HTGD+K+D + G +TD Sbjct: 115 TRVVKEDDVDQLGPFDLEFVAVNHSIPDALAVFIRTGAGNILHTGDFKMDQLPLDGRITD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA G EK I + ++ +A+ ++V +FSS + R Sbjct: 175 LRAFARLGEEGVDLFMTDSTNAEVPGFTALEKDIGPVLENLFGHAERRIIVASFSSHIHR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIA 298 ++ +++ A+ GRK+ L+G S+ R + +A D+G ++ + + P +Q++++ Sbjct: 235 VQQVLNAADAHGRKVALVGRSMVRNMKIAEDLGYLEVPRGALIDIKEVDKLPDDQVVLMC 294 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ R V++ + DTVI +S IPGNE ++ + N L++ G VI Sbjct: 295 TGSQGEPMAALSRMANRSHR-VEVGDGDTVILASSLIPGNENSVFKVINGLMKLGANVI- 352 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 A+ +HVSGH +L Y ++P+ ++ +HGE H++A+ A G+ + Sbjct: 353 SKADAKIHVSGHASGGELLYCYNIVKPRGVMPVHGEWRHMLANARHAEATGVNPDNIVLA 412 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G ++ L E++ V DG +G+ + + R LS G +++ + +++ Sbjct: 413 DDGWVVDLKDGHAEVVGAVDCNFVFVDGSSVGEITEADLKDRLVLSGEGFVTIFMAINSQ 472 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI G+ D I + K V + D D L++ + + Sbjct: 473 TKSLIAGPEIHARGVAESDSVFDSIMPKVTKAVEDALKD----GTTDQYQLQQVVRRTVG 528 Query: 536 SLLKKVWGKKPLVTVFIN 553 +KP++ + Sbjct: 529 RWASSKLRRKPMIVPMVV 546 >gi|237737745|ref|ZP_04568226.1| metal-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] gi|229419625|gb|EEO34672.1| metal-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] Length = 632 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 292/561 (52%), Gaps = 13/561 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G N + Y + I+ID GV FP ++L G+DLV PD +F+ Sbjct: 78 KEEKMYVIPLGGMEEVGKNSTVVQY----RDEIIIIDSGVIFPDENLLGIDLVIPDFSFL 133 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 + + +F+TH HEDH G++ L+ + VP++ + L ++K Sbjct: 134 ENNKDKIKGLFVTHGHEDHIGSIPYLYQKIDKSVPMFGGKLTLALAKSKFENGFTKDIPK 193 Query: 120 CISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + K+ VG F++E +++ HSI + +L++ +P G + HTGD+K+D + G+ Sbjct: 194 MKEVKGRTKIKVGKYFTVEFIKITHSITDAYSLLVTTPAGTVFHTGDFKIDLTPVDGEGV 253 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG +G+ ++ DSTN+ EG SE+ + + AKG ++V F+S V Sbjct: 254 DFARLSQIGEQGVDLMLSDSTNSEVEGFTPSERSVGEAFKVEFSKAKGRIIVAAFASHVH 313 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I+++A++ GRKI + G SL +V +A +G +K + + + +++++ Sbjct: 314 RLQQIVNVAQEYGRKIAIDGRSLVKVFEIAGSLGYLKVPNDMMVPLSEVDTLKDNKVVIL 373 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A+ + N L++ V+ Sbjct: 374 CTGTQGEPMAALSRIAKNMHKHIKIKEGDTVIISATPIPGNERAVSNNINNLLKYDAEVV 433 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + +HVSGH + K M I+P+ + +HGE L AH++ A++ GI + Sbjct: 434 FKKI-AGIHVSGHGSKEEQKLMLNLIKPKYFMPVHGEHKMLKAHQDTAMETGIPKNNIII 492 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 +NG + + +I +V G L DG +G ++ + R+QLS G + + LD Sbjct: 493 AQNGSKIEVTKSGAKIKGKVNAGCTLVDGLGVGDIGNIVLKDRQQLSQDGVVVIVFTLDK 552 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I P+IV G Y + I K ++ + + D + KD LL+ + Sbjct: 553 ETGKIVAGPDIVTRGF-VYSKESDDIIKEAIENIKEKIDDTSNYYSKDWGLLKNTTRDIA 611 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 612 AKFFYNKTKRNPMILPIIMEV 632 >gi|289644572|ref|ZP_06476642.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] gi|289505611|gb|EFD26640.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] Length = 561 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 165/554 (29%), Positives = 278/554 (50%), Gaps = 17/554 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 + LGG+GEIG NM ++ + + +++DCGV FP+ D PGVDL+ PD T I Sbjct: 20 RIVALGGLGEIGRNMTVFEF----DGRLLVVDCGVLFPESDQPGVDLILPDFTAIRDRLD 75 Query: 67 NLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +THAHEDH GA+ L +P+ S + L AK R++ + + Sbjct: 76 AIEAVVLTHAHEDHIGAIPYLLRERADIPLVGSRLTLALTVAKLAEHRITP--VTVEVRE 133 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G G F E VNHSIP+ MA+ IR+P G ++HTGD+K+D + G +TD Sbjct: 134 GQVHSFGPFGCEFFAVNHSIPDAMAVAIRTPAGLVLHTGDFKMDQLPLDGRLTDLGGFAR 193 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G EG+ L+ DSTNA G SE+ I + + + A ++V F+S V R++ ++D Sbjct: 194 LGREGVDLLLSDSTNAEVPGFVTSEREIAPVLDGVFRGANKRIIVACFASHVHRVQQVLD 253 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 AE GR + +G S+ R + VA D+G+++ L + P + +++TGSQGE Sbjct: 254 AAEAHGRSVCFVGRSMVRNMGVARDLGLLRVAPGLMVDMRDIASLPDRNVCLVSTGSQGE 313 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL++++ + +++ DTV+ +S IPGNE A+ + N L G +V+ + Sbjct: 314 PLSALSRMANRDHA-IRIEAGDTVVLASSLIPGNENAVHRVINGLTRWGAKVVHKGV-AK 371 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 VH SGH +L + RP ++ +HGE HL AH LA G+ + +G ++ Sbjct: 372 VHTSGHAPAGELLYVLNATRPSNVMPVHGEWRHLRAHGALAEATGVPADRIVLADDGMVV 431 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFG 481 L I V G DG +G + + RR L G +++ V++D + G Sbjct: 432 DLVDGQANITGVVPCGYVYVDGLAVGDVGESSLKDRRILGDDGFITITVVVDAASGKVVG 491 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE+ G D + + + V + + + D+ L++ + + + Sbjct: 492 GPELSARGFS----DAREAFEQVRGLVSEALAESMRSGMVDVAALQQLVRRTVGRWVSDT 547 Query: 542 WGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 548 YRRRPMIVPVVVEV 561 >gi|307244361|ref|ZP_07526474.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] gi|306492262|gb|EFM64302.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] Length = 556 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 179/559 (32%), Positives = 299/559 (53%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+ + +PLGG+ EIG NM + Y + I+ID G+SFP+D+L G+D+V PDI ++ Sbjct: 5 NNDIIKIIPLGGINEIGKNMTVIEY----KDEIIVIDAGLSFPEDELLGIDIVIPDILYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 M+ + IFITH HEDH GA+ L ++VPVY SP +I L+ K R++ I Sbjct: 61 MRNINKVKGIFITHGHEDHIGAIPYLLKKINVPVYGSPLSIELIRVKLKEHRITNAKLNI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ + +E +RVNHSIP+ ++ + + G I HTGD+K+D I G + D Sbjct: 121 VG-PRQQIKLKNMQVEFIRVNHSIPDAYSIAVHTNQGVIFHTGDFKIDLTPIDGQMMDIH 179 Query: 182 SLCAIGN-EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSR 239 +C I + EGIL +M DSTNA + G+ +SEK + + + ++ K A ++V TF+S++ R Sbjct: 180 RICQISDEEGILLMMADSTNADKPGSTMSEKSVGEGLDNLFKRAQDSRIIVATFASNIHR 239 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++ I ++A+ GRK+ + G S+ ++ VA ++G + D+ + S Y +L++I T Sbjct: 240 LQQIAEVAKVYGRKVAVSGRSMVNILGVAKELGYLSTDEHIIDLNSIHKYKDNELVIITT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E + V++ + D VI S+ IPGNE + + N L+E+G V++ Sbjct: 300 GSQGEPMSALARMANSEHKKVEIKKGDLVIISAHPIPGNEKTVSKVINFLLEKGADVVSS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D +HVSGH +LK M+ +P+ + +HGE L H ELA G + + Sbjct: 360 DI-ADIHVSGHARQEELKLMHAIAKPKFFLPVHGEYKMLKRHAELAKGVGTDPDNIFIIS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG +L + V G L DG +G ++ + R+ LS G +++ V L Sbjct: 419 NGDILEVDRKSARKNGRVPSGRVLIDGLGVGDVGNIVLRDRKHLSEDGLMTIVVTLSKED 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + + + V+ K+ ++ +I L+ Sbjct: 479 GRILAGPDIISRGF-VYVRESETLMDGAKEIVLNIFKQCEAKNIKEWAYIKNTIKDELKE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L + P++ + ++ Sbjct: 538 YLYIKTKRNPMILPILMEV 556 >gi|307711096|ref|ZP_07647518.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307617058|gb|EFN96236.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 559 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEILILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|148983525|ref|ZP_01816844.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP3-BS71] gi|225855910|ref|YP_002737421.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae P1031] gi|147923672|gb|EDK74784.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP3-BS71] gi|225724404|gb|ACO20256.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae P1031] gi|301799301|emb|CBW31827.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] Length = 559 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G I+ TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIICTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEILILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|324990363|gb|EGC22301.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK353] gi|324994287|gb|EGC26201.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK678] gi|325688625|gb|EGD30642.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK72] gi|325689483|gb|EGD31488.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK115] gi|325693802|gb|EGD35721.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK150] gi|325697872|gb|EGD39756.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK160] gi|327459105|gb|EGF05453.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1057] gi|327459507|gb|EGF05853.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1] gi|327490707|gb|EGF22488.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1058] gi|332358455|gb|EGJ36280.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK49] gi|332358613|gb|EGJ36437.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1056] Length = 560 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|86137577|ref|ZP_01056154.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] gi|85825912|gb|EAQ46110.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] Length = 556 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 204/557 (36%), Positives = 301/557 (54%), Gaps = 4/557 (0%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDI 58 M +E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSTDERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVAFPDMDSTPGVDLIMPDI 60 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +++ + L AIFITH HEDH GA+ L+S L+VPVYA F L K + Sbjct: 61 SWLRERVDQLEAIFITHGHEDHIGAVSHLYSQLNVPVYARAFTANLARRKMEERGHDPLV 120 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + +G FS+ + HSIPE+ LVI SP G +VHTGD+KLD ++G+ Sbjct: 121 VKTVGAWPEVTKLGPFSVGFAPMAHSIPESAGLVIDSPGGRVVHTGDFKLDRTPLVGEAF 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + I GI AL+CDSTN + SE + I ++ A G V TTF+S+V+ Sbjct: 181 DPEMWAEIAKPGIKALICDSTNVFSKTPGRSESELPDEIRRLISEAGGMVAATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ D + GR +VLLG ++ R+V A + G++ S E PR L++I Sbjct: 241 RVKTLADAGTRAGRSVVLLGRAMLRMVEAAKETGVLTDFPTVYSPEEAKDMPRNNLMLIT 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQ++RG+ R ++L E D +FSS+ IPGNE + I N+ E+GV V+ Sbjct: 301 TGSQGERRAASAQMARGKYRGLELKEGDLFLFSSKTIPGNERGVIRIINQFSERGVDVV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +D+ HVSGH DL+ ++ ++P +LV +HGE HL H L +GI + N Sbjct: 360 DDSSGLYHVSGHANGPDLEALHALLQPAMLVPMHGEHRHLRQHARLGEAKGIPSI-VAVN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ML L + +++ + G DG + D I R +++ GHL V ++LD Sbjct: 419 GMMLNLSGNRPSVLEYIDTGRTYLDGSIQIGAMDGVIRDRIRMALNGHLVVTLILDEEDE 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G P G+ + ++L + + ++ KD L + R Sbjct: 479 PLGEPWCDIKGLTDNGSSNAALTEVLEEDLNQFLMRAGAKTLKDDDKLEGELRRIARQSC 538 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV I+++ Sbjct: 539 QNEIGKKPEVTVVISRM 555 >gi|302528508|ref|ZP_07280850.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. AA4] gi|302437403|gb|EFL09219.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. AA4] Length = 594 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 173/555 (31%), Positives = 287/555 (51%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GE+G NM ++ Y + +++DCGV FP+DD PGVDL+ PD I Sbjct: 51 LRVVALGGIGEVGRNMTVFEY----DGRLLIVDCGVLFPEDDQPGVDLILPDFRAIEDRL 106 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ + +TH HEDH GA+ L VP+Y S F LL AK R K+ I + Sbjct: 107 DDIDGLVLTHGHEDHIGAVPFLLRLRPDVPIYGSRFTNALLAAKAKEHRQRPKL--IEVR 164 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+K VGAF +E VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 165 EGEKRKVGAFDLEFFAVNHSIPDALAVAIRTPAGVVLHTGDIKLDQLPLDGRLTDLAGFS 224 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ DSTNA G + E+ I + D+++ V+V F+S V R++ ++ Sbjct: 225 RLGDEGVDLFCVDSTNAEVPGFVMPERDIGPVLDDVIRRVDQRVIVACFASHVHRVQQVL 284 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A ++G++ + L + + P +++ ++TGSQG Sbjct: 285 DAAVRHGRRVAFVGRSMVRNMGIAAELGLLNVPEGLLVDLDQASNLPESKVLFVSTGSQG 344 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + DTV+ +S IPGNE A+ + N L G V+ + Sbjct: 345 EPLSALSRMARGEHRQISIRAGDTVVLASSMIPGNETAVFGVVNGLTRLGANVVHQG-NA 403 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH +L +Y +RP ++ +HGE HL A+ ELA++ G+ V +G + Sbjct: 404 KVHVSGHASAGELLYLYNAVRPSNVMPVHGEWKHLRANGELAIRTGVAPDNVVIAEDGVV 463 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L V G DG +G + ++ R L G +++ V +D++ Sbjct: 464 VDLVDGKASRTGRVEVGHVYVDGLSVGDVGESTLSDRLVLGEGGFIAITVAVDSNTGRAV 523 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G D K ++ V + D + +++ + + Sbjct: 524 SSPTISGRGFS----DDPKALDAVVPLVEMELARTEAEGITDTHRIAQAVRRVVGRWVAD 579 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 580 TYRRRPMIVPTVIPV 594 >gi|328945267|gb|EGG39420.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1087] Length = 560 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDTKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGNFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|222153722|ref|YP_002562899.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222114535|emb|CAR43458.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 560 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 169/557 (30%), Positives = 273/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 62 IVDNIDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDSKM 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G IV TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-DPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKNYHANEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE H LA GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMQKVHAGLAQDTGIPEENIFILE 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFDT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + SI +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKEASIQSVNGSIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|332685717|ref|YP_004455491.1| Zn-dependent hydrolase [Melissococcus plutonius ATCC 35311] gi|332369726|dbj|BAK20682.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog [Melissococcus plutonius ATCC 35311] Length = 558 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 160/557 (28%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGIFAVGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +++P+YA P A+ L+ K + + Sbjct: 61 IVQNINKVKALVITHGHEDHIGGVPYLLKQVNIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + ++ R HSIP+ + +V+++P GNI+ TGD+K D + + + Sbjct: 121 HEINEDSVIRFRKTAVSFFRTTHSIPDALGIVVKTPSGNIIQTGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK I +I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSILKIVEKIEGRIIFASFASNIYRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A GRKI + G S++ + +G I D F+ P +++++ T Sbjct: 240 QQAAEAAVNTGRKIAVFGRSMENAIVNGQRLGYINVPDGTFVEASELNQLPANEIMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISVHPGDTVIFSSLPIPGNTTSVNRLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + IHGE L H LA G+ ++ Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLSLIKPKFFMPIHGEYRMLKIHASLAQDIGVPSENCFIMK 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D + DG +G + + RR LS G + +D + Sbjct: 419 NGDVLALTADTARLAGHFNANDVYVDGSGVGDIGSVVLRDRRILSEEGLVIAVTTVDIKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + + E++++ L+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGDMIHEGQRLLFNAIREAMRDKHCTESKIGEAMTTTLQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ + Sbjct: 538 FLFEQTERHPMILPMVM 554 >gi|294618376|ref|ZP_06697954.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|291595353|gb|EFF26668.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] Length = 559 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 271/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+DDL G+D V PD ++ Sbjct: 5 IKNNETGVFAIGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L E G VI Sbjct: 300 GSQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA G+ + Sbjct: 360 KIN-NIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D V G DG IG ++ + R LS G + +D Sbjct: 419 NGDVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLCDRHLLSEEGLVLAVATVDIKK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + L+E+++ AL+ Sbjct: 479 KEILAGPDILSRGF-VYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + + P++ + + Sbjct: 538 FLFERTERHPMILPMVMTPDEE 559 >gi|125717186|ref|YP_001034319.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus sanguinis SK36] gi|125497103|gb|ABN43769.1| Hydrolase, metallo-beta-lactamase superfamily, putative [Streptococcus sanguinis SK36] Length = 560 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQHTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 538 FLYESTEREPIIIPMVLTPDEE 559 >gi|257056513|ref|YP_003134345.1| putative hydrolase of the metallo-beta-lactamase superfamily [Saccharomonospora viridis DSM 43017] gi|256586385|gb|ACU97518.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Saccharomonospora viridis DSM 43017] Length = 565 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 173/560 (30%), Positives = 293/560 (52%), Gaps = 16/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L + LGG+GE+G NM ++ Y + +++DCGV FP+D PGVDL+ PD Sbjct: 17 LPKGALRVVALGGIGEVGRNMTVFEY----DGRLLVVDCGVLFPEDAQPGVDLILPDFRA 72 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ A+ +TH HEDH GA+ L +PVY S F + LLEAK R + Sbjct: 73 IEDRIGDIEALVLTHGHEDHIGAVPFLLRMRPDLPVYGSRFTLALLEAKCKEHRQRPTLV 132 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G + VG F +E VNHSIP+ +A+ +R+P G ++HTGD KLD + G +TD Sbjct: 133 QV--AEGQRRRVGPFELEFFAVNHSIPDALAVALRTPAGLVLHTGDIKLDQLPLDGRLTD 190 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+EG+ L DSTNA G SE+ I + D++ A+ V+V F+S V R Sbjct: 191 LAGFSRLGDEGVDLLCIDSTNAEVPGFVTSERDIGPVLDDVIARARQRVIVACFASHVHR 250 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GR++ +G S+ R +++A ++G++ + L + + P +++ I+ Sbjct: 251 VQQVLDAAHRHGRRVTFVGRSMMRNMTIAAELGLLSIPEGLLIDLDEAVNLPESKVLFIS 310 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++RGE + + + DTV+ +S IPGNE A+ + N LV G V+ Sbjct: 311 TGSQGEPLSALSRMARGEHKQISIRAGDTVVLASSLIPGNETAVFAVINGLVRLGADVVH 370 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +L +Y +RP+ ++ +HGE HL A+ ELA++ G+ V Sbjct: 371 QG-NAKVHVSGHASAGELLFLYNALRPKNVMPVHGEWRHLRANAELAVRTGVAEDNVVLA 429 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L I V G+ DG +G + ++ R L G +++ V +D+ Sbjct: 430 EDGVVVDLVDGKASITGRVEVGMVYVDGLSVGDVGESTLSDRLILGEGGFIAITVAVDST 489 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 P + G D K + + V + D + +++ + Sbjct: 490 TGRAMSSPTLSGRGFS----DDPKALDEVTQLVEMELSRTEAEGITDTHQIAQAVRRVVG 545 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + + ++P++ + + Sbjct: 546 RWVAETYRRRPMIVPTVIPV 565 >gi|319441548|ref|ZP_07990704.1| hypothetical protein CvarD4_07251 [Corynebacterium variabile DSM 44702] Length = 711 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 176/556 (31%), Positives = 290/556 (52%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L + LGG+ EIG NM ++ Y + ++IDCGV FP PGVDL+ PD +++ Sbjct: 147 KDGLRLVALGGISEIGRNMTVFEY----HDRLLIIDCGVLFPSSGEPGVDLILPDFSYLE 202 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+ AS F L+ AK R K+ + Sbjct: 203 GKWDKVEALVVTHGHEDHIGAIPWLLKQRSDIPIIASRFTCALIAAKCQEHRQRPKLIQV 262 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +K G F I V HSIPE + + +++P G ++HTGD K+D G TD Sbjct: 263 DDTSHEKR--GPFDIRFFNVGHSIPECLGIALKTPAGLLIHTGDVKMDQTPADGRPTDLP 320 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE GI + ++ NAK VLV +F+S+VSR++ Sbjct: 321 ALSRFGDEGVDLMLCDSTNATTPGVSPSEAGIAPTLERLISNAKQRVLVASFASNVSRVQ 380 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 +D A + GRK+ G S+ R + +A +G++ +S + ++++I TG Sbjct: 381 MAVDAAVKAGRKVAFSGRSMIRNMEIAERLGLLTAPRGTIVSMDEASRLAPHKVVLITTG 440 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + D +I SS +PGNE A+ + N L + G VI Sbjct: 441 TQGEPMAALSRMARREHRQITIRPGDLIILSSSLVPGNEEAVFGVINMLSQIGATVITGK 500 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A++ELA+ G+ +N Sbjct: 501 -DAMVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANRELAISTGVNPDNTVLAQN 559 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L +++ ++ G DG +G I R Q+S G +SV V++DN Sbjct: 560 GGVVDLVNGHAKVVGQIPVGNLYVDGVTMGDVGAEEIEDRTQMSEGGLISVTVVIDNRSG 619 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P++V G ++ K + + V ++DL D + +++ + Sbjct: 620 RPLEDPQVVAKGFSEG---SKEMMKQVAEVVDNAMLDLSGQGENDPYRMAQTLRRKVAKF 676 Query: 538 LKKVWGKKPLVTVFIN 553 +K W ++P++ I Sbjct: 677 VKDKWKREPMIIPTIV 692 >gi|85717014|ref|ZP_01047976.1| hydrolase of the metallo-beta-lactamase superfamily protein [Nitrobacter sp. Nb-311A] gi|85696138|gb|EAQ34034.1| hydrolase of the metallo-beta-lactamase superfamily protein [Nitrobacter sp. Nb-311A] Length = 557 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 238/553 (43%), Positives = 353/553 (63%), Gaps = 2/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL+F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PDI F Sbjct: 4 RPDELMFAPLGGVGEIGMNLSIYGIGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +ERKNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER IP Sbjct: 64 LEQERKNLVGLVLTHAHEDHFGAIIDLWPRLKCPIYATRFSAALFEAKCAAERNPPDIPV 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +++VG F +E + V HSIPE+ AL I + G +VHTGDWK+D I+G TD+ Sbjct: 124 TVVPSGGRIEVGPFGVEFIPVAHSIPESHALAIHTAAGIVVHTGDWKIDPTPIIGPPTDE 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LAL+ DSTNA+R+G SE + + I D++K AKG V VTTF+S+V R+ Sbjct: 184 RRFRELGDEGVLALIGDSTNAVRDGRSASEAEVARTIADLVKAAKGRVAVTTFASNVGRL 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A + GR++V++G ++ RVV VA + G + Q F S + +G P ++++ + TG Sbjct: 244 RAVADAAREAGREVVVVGRAMARVVQVARETGHLNGMQDFRSADVYGHLPPDKVLALCTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++R + V L DTVIFSSR IPGNE A+G I N LV QG+ +I + Sbjct: 304 SQGEPRAALARIARDDHPEVTLNRGDTVIFSSRTIPGNEKAVGAIINGLVAQGIEIITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++L+ M W+RP++L+ +HGE LHL H LA G+ V NG Sbjct: 364 TE-LVHVSGHPRCDELRDMISWVRPRLLIPVHGEALHLSEHARLARASGVPKVLICTNGD 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P IIDE+ G KDG ++ + +RR+++F G + V + + + + Sbjct: 423 LVRLGPGEPGIIDELPSGRLYKDGAILEDSKSRAVVERRRMAFAGCVFVAIAVTDKGELV 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEI +GIP + G + ++ TV++T + R+D + ES+ A+R+ + + Sbjct: 483 EDPEIDLVGIPEKNMAGEVLDDIVFDTVVSTAKGFSRTLRRDPDAMAESLRRAVRAAVAE 542 Query: 541 VWGKKPLVTVFIN 553 WGKKPL V + Sbjct: 543 EWGKKPLCYVHVL 555 >gi|84496918|ref|ZP_00995772.1| hypothetical protein JNB_05325 [Janibacter sp. HTCC2649] gi|84383686|gb|EAP99567.1| hypothetical protein JNB_05325 [Janibacter sp. HTCC2649] Length = 561 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 172/554 (31%), Positives = 295/554 (53%), Gaps = 17/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG+GE+G NMA+ + + ++IDCGV FP D PG+DL+ PD ++I Sbjct: 19 VRIVALGGLGEVGRNMAVIEH----QGQLLIIDCGVLFPDDHHPGIDLILPDFSYIADRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 75 DDVQAIVLTHGHEDHIGAVPFLLRLKADIPLVGSNLTLALIEAKLKEHRIKPYTLAV--K 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + G F E + VNHSIP+ +A+ +R+ G I+HTGD+K+D + G +TD + Sbjct: 133 EGGRETFGVFDCEFIAVNHSIPDALAVFVRTSGGTILHTGDFKMDQLPLDGRLTDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ M DSTNA G EK I I + ++A+ V+V FSS V R++ ++ Sbjct: 193 RLGEEGVDLFMTDSTNAEVPGFTTPEKEIAPAIDRVFRDARRRVIVACFSSHVHRVQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D AE+ GRK+ ++G S+ R + +A ++G + D + + + G P ++ +I TGSQG Sbjct: 253 DAAEKSGRKVAMVGRSMVRNMGIAAELGYLHVPDGILVDFKKLGNLPDNKVTLICTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ E DTV+ +S IPGNE A+ + N L+ G V+ + Sbjct: 313 EPMAALSRMANRDH-QIEVGEGDTVLMASSLIPGNENAVYRVINGLMRLGADVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LAL G+ V V +G + Sbjct: 371 KVHVSGHASAGELLYCYNIVKPRNVMPVHGEWRHLRANADLALATGVHPKGVVVVEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L + + V G DG +G+ + + RR L G +SV V++D+ I Sbjct: 431 VDLIDGKVNVAGAVEAGYVYVDGSSVGEADEGLLKDRRILRDEGFISVIVVMDSSTGKIV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEI G +G + ++ +++ + D D L + + ++ + + Sbjct: 491 AGPEIAARGFV----EGDMVFDDVMPSLVKALDDATAQGMNDSYQLEQVMRRSVGGWVGR 546 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 547 KIRRRPMIIPVVIE 560 >gi|306826059|ref|ZP_07459395.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431775|gb|EFM34755.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 559 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMATLGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVDKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASIQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|206602078|gb|EDZ38560.1| Metallo-beta-lactamase family protein [Leptospirillum sp. Group II '5-way CG'] Length = 562 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 189/558 (33%), Positives = 308/558 (55%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG+GEIGMNM Y + +++DCGV FP+DDL G+DL+ PD+T++ Sbjct: 11 SEPWVRIIPLGGIGEIGMNMTAYE----TPDGIVVVDCGVLFPEDDLLGIDLIIPDMTYL 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R L+A+F+TH HEDH GA+ VPV+ +P +GL+E K + + Sbjct: 67 KENRNRLLALFLTHGHEDHIGAIPYFLREFDVPVFGTPLTLGLVEGKVRQHKSLPPPRLV 126 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +K VG F+ E +R+ HSI + +A I + G I+HTGD+K+D I + D Sbjct: 127 SIRPREKYTVGPFTFEPIRITHSIADGVAFAIMTEAGTILHTGDFKIDLTPIDNEHFDMH 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 LC++G EG+L L+ DSTN+ +EG +SE+ + + + ++ A G V+V TFSS++ R++ Sbjct: 187 RLCSLGEEGVLCLISDSTNSEKEGLSLSERQVTEPLEQMISQAPGRVIVATFSSNIHRLQ 246 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D++ + GRKI L G S++ VA ++G + + + YP E++ ++ TG Sbjct: 247 QVADVSIRNGRKIALTGRSMETNARVAGELGYLSIPPDQIIRLDQVSQYPPERVTILTTG 306 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ G+ ++V + DT++ S+R IPGNE AI I N L ++G +V Sbjct: 307 SQGEPMSALFRMALGDHKHVSIGPGDTILLSARIIPGNERAINKIINLLGKKGAKVFYRR 366 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH D K M + +RP+ V +HGE L H A++ GI V + N Sbjct: 367 I-SEIHVSGHASQEDQKLMIRMLRPKYFVPMHGEFRQLSQHARTAVRTGIPEENVFVIEN 425 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G +L L + ++VV G DG IG D+ I R++L G ++V V L Sbjct: 426 GVVLELTQSVVRQREKVVSGRTFIDGKGIGDVEDMVIRDRQRLGSDGIVTVIVALSQQTG 485 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PE+ G+ D ++ +L V + +L +K++ L+ + + LR Sbjct: 486 EIVVGPEVSTRGVVLSDLSLE-MNAILKTQVELLLQELEPEIKKEVSALKTLVHNHLRRY 544 Query: 538 LKKVWGKKPLVTVFINKI 555 KK + + P++ + ++ Sbjct: 545 FKKNFERDPVIIPVLLEM 562 >gi|139473132|ref|YP_001127847.1| Zn-dependent hydrolase [Streptococcus pyogenes str. Manfredo] gi|134271378|emb|CAM29598.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] Length = 560 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 164/562 (29%), Positives = 274/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L I DG IG + RR LS G + +D + Sbjct: 420 NGDVLALTSGSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 539 FLYEKTEREPIIIPMVLTPDKH 560 >gi|306821109|ref|ZP_07454725.1| metallo-beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550802|gb|EFM38777.1| metallo-beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 553 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 293/556 (52%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ ++ LGG+ EIG NM + Y ++IDCG+ FP+D++ G+D+V PD++++ Sbjct: 4 KSAKIKAFLLGGLNEIGKNMTVLEY----KNDIVVIDCGLIFPEDEMLGIDIVIPDVSYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K + + A+ ITH HEDH GA+ ++VP+Y PF +GL+ K +S + Sbjct: 60 VKNKDRIKALLITHGHEDHIGAIPFFLKKMNVPIYTMPFTMGLIALKLKENNISG-VELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q K+ +G+F+ E +RVNHSIP++ A+ + + G + HTGD+K+D + D + Sbjct: 119 VIQPNQKIVLGSFTAEFIRVNHSIPDSCAIALYTDAGTVFHTGDFKVDYTPVDDVRIDLN 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRI 240 + IG++G+ ++ +STN R G SE + + I + + V TF+S+V R+ Sbjct: 179 KIAEIGSKGVTLMLGESTNVERPGYTESEASVGNTLNQIFASVDNNRIFVATFASNVHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + IID A + G+K+ + G S+ ++ VA ++ +K D ++ Y +L++I T Sbjct: 239 QQIIDAAYKTGKKVAVSGRSMANIMDVASELNYLKIPDNTYIDLRDINKYDDNELVIITT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SAL ++S+ E R +++ D V+FS+ IPGNE + + N L G VI + Sbjct: 299 GSQGEPLSALTRMSKMEHRQIEIRRGDVVVFSAHPIPGNEKLVSRVINDLFAIGATVIYD 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE--LALQEGIACVPPVR 417 +HVSGH +LK M ++P+ + IHGE HL+ HKE L + V + Sbjct: 359 SV-SEIHVSGHARQEELKLMLSLVQPKFFIPIHGEKRHLIQHKEMSLKIGLKEENVFLLS 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ + + +I +V G L DG +G ++ + R+ LS G + V + L Sbjct: 418 NGDVVEVDKNEAKITGKVPSGNILVDGLGVGDIGNIVLRDRKHLSEDGLIVVVIPLRESE 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I EI+ G Y + ++ + V+ ++ + ++ I L++ Sbjct: 478 KIADKIEIISRGF-IYVKESEELIDDIKSVVVDSIEGFERRDMSQFNYIKNVIRDNLKAF 536 Query: 538 LKKVWGKKPLVTVFIN 553 L + G+ P++ + Sbjct: 537 LLEKTGRNPMILPIVL 552 >gi|16126177|ref|NP_420741.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] gi|221234949|ref|YP_002517385.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] gi|13423391|gb|AAK23909.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] gi|220964121|gb|ACL95477.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] Length = 559 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 208/555 (37%), Positives = 327/555 (58%), Gaps = 1/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+E VFLPLGG EIGMN LYG+G RKWI++D GV+F PGV+++ PD ++I Sbjct: 5 KNDEFVFLPLGGSNEIGMNFNLYGFGPAHDRKWIVVDLGVTFGDQTTPGVEIILPDPSYI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +++ I +THAHEDH GA+H LW L PV+A+PF LL K + ++ Sbjct: 65 EPYADDILGIVLTHAHEDHLGAVHWLWPRLKAPVFATPFTAFLLREKLRDADLLGEVEIT 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G +G F +E + + HSIPE L I++P+G ++HTGDWK+D D LG TD+ Sbjct: 125 EVPLGGSFKLGPFELELITLTHSIPEPNGLAIKTPLGTVLHTGDWKIDPDPQLGAPTDEA 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++ +G+EG+LA++CDSTN +EG+ SE ++ + D++K+ G + V F+S+V+R+ Sbjct: 185 AIRRLGDEGVLAMVCDSTNVFQEGSAGSEADVRTALGDLIKSLNGKIAVACFASNVARMD 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++I A+ GRK+ L G S+ R+ + A VG+++ + F++D+ P +++ + TGS Sbjct: 245 TVIRAAQACGRKVSLAGRSMHRMAAAARSVGLLEGLEPFINDDQAKHLPENEVLYLCTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL++++ G +VK+ D VIFSSR IPGNE+ I +++N+L ++GVR+ E Sbjct: 305 QGEARAALSRIADGSHPHVKMGSGDHVIFSSRVIPGNEIPIRNLQNKLADRGVRLHTERD 364 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP ++L++MY W+RP + V HGE HL+ H LA + RNG M Sbjct: 365 TPGIHVSGHPCRDELRQMYAWVRPHIAVPTHGERRHLIEHAALAKDLQVPHAVSPRNGDM 424 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + L P IIDEV G DG ++ + +RR +F G L+V+++LD I Sbjct: 425 VLLAPGQPGIIDEVPAGRLYVDGGVVTPENGEALRERRHAAFNGVLAVSIVLDGRNKIVS 484 Query: 482 VPEIVDIGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I IG+ D L + + L R+ + + +IS A++ + Sbjct: 485 GPQIRGIGLTGDDEYTLDDALDDLCEEAESAYKKLDGDAREIDETIESAISRAVKKAAFR 544 Query: 541 VWGKKPLVTVFINKI 555 +W +KP+V + +I Sbjct: 545 IWERKPVVETTVLRI 559 >gi|15675695|ref|NP_269869.1| Zn-dependent hydrolase [Streptococcus pyogenes M1 GAS] gi|19746803|ref|NP_607939.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS8232] gi|50914952|ref|YP_060924.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|56808615|ref|ZP_00366343.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pyogenes M49 591] gi|71911408|ref|YP_282958.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94991175|ref|YP_599275.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94995049|ref|YP_603147.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|209560032|ref|YP_002286504.1| hypothetical protein Spy49_1549 [Streptococcus pyogenes NZ131] gi|306826674|ref|ZP_07459977.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] gi|13622911|gb|AAK34590.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19749038|gb|AAL98438.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|50904026|gb|AAT87741.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71854190|gb|AAZ52213.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94544683|gb|ABF34731.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94548557|gb|ABF38603.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|209541233|gb|ACI61809.1| hypothetical protein Spy49_1549 [Streptococcus pyogenes NZ131] gi|304431122|gb|EFM34128.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] Length = 560 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 275/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 539 FLYEKTEREPIIIPMVLTPDKH 560 >gi|149914600|ref|ZP_01903130.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] gi|149811393|gb|EDM71228.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] Length = 556 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 197/558 (35%), Positives = 317/558 (56%), Gaps = 3/558 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M ++ L+++PLGG GEIGMN +YGYG + I++D GV+FP D PGVDL+FPDI Sbjct: 1 MSSDRLIYMPLGGAGEIGMNAYVYGYGPKGKERLILVDLGVTFPDMDSSPGVDLIFPDIQ 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ R+ L A+FITHAHEDH GA+ + L PVYA F + K S+K Sbjct: 61 WLAARREQLEAVFITHAHEDHVGAVAHYYEQLGAPVYARAFTANIARRKMEEFGYSEKAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + VG F++ V ++HSIPE+ LVI +P G +VH+GD+K+D + ++G+ D Sbjct: 121 RVVSPWPEVTKVGPFTVGFVPISHSIPESSGLVIDTPKGRVVHSGDFKIDANPVVGEPFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + ++ G+ ALMCDSTN SE + ++I ++ AKG V+ TTF+S+V+R Sbjct: 181 PELWASLAKPGVKALMCDSTNVFNTHAGRSESTLAEDIQALIAGAKGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + A++ GR + LLG +++R++ +++ G++ +S E PRE L++I T Sbjct: 241 LKTLAEAADRAGRSVCLLGRAMRRMIEASVETGVLTSFPKTVSPEEAKDIPRENLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL++G + + E D +FSS+ IPGNE + I N+ E GV V+ + Sbjct: 301 GSQGERRAASAQLAQGNYLGLSMKEGDMFLFSSKTIPGNERGVIKIMNQFSEMGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D++ HVSGH DL++++ ++PQ++V +HGE HL H +LA + + V NG Sbjct: 360 DSDGKYHVSGHANRPDLEKLHDLLQPQIVVPMHGEHRHLREHAKLANSKRMQGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + EI D V G DG + D + R +++ GH++VNV+LD Sbjct: 419 TMVDLTGNRAEICDYVETGRTYLDGSVKIGALDGIVRDRIRMALNGHVTVNVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+P + +L + + + D + L +++ R + Sbjct: 479 LGEPWCEIKGLPETGNSRAPLVDVLEEDLGQFLGRAGAKVLTDDEKLEDALRKITRQSAQ 538 Query: 540 KVWGKKPLVTVFINKISR 557 GK+P VTV I++++ Sbjct: 539 NEIGKRPEVTVVISRLAE 556 >gi|328553427|gb|AEB23919.1| ribonuclease J2 [Bacillus amyloliquefaciens TA208] gi|328911781|gb|AEB63377.1| ribonuclease J2 [Bacillus amyloliquefaciens LL3] Length = 555 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 164/562 (29%), Positives = 294/562 (52%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 57 ISYLVERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + + + HSIP+++ + ++ +G+IV TGD+K D Sbjct: 117 ADLREVHSKSVITFESTKVSFFKTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPAYHQS 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA R G SE + I D M ++ V+V F+S++ Sbjct: 177 CDIGEIAKIGNSGVLALLSDSANAERPGYTPSEADVSGEISDAMYISENRVIVAVFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI+ +I A Q GRK+ + G +L+ V+ +A +G I+ D+LF+ + YP+ ++ + Sbjct: 237 NRIQQVIQAAAQNGRKLAIAGKNLQNVLQLARKLGYIEADDELFIPVQDVKKYPKREVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + GS GEP +AL ++++ + + + E DTV+ +S IPG+E+ N+LV G +V Sbjct: 297 VTAGSHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELVYSKTVNQLVRAGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH ++A + + + Sbjct: 357 IF--AQKRVHVSGHGSQEELKLMLNLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIEKGDVVEFRGQNVKIGDKVTYGNVLIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N+ PEI+ G Y + + + V + V + + + L++++ A Sbjct: 475 KQKKNLVSGPEIITRGF-VYVRESEGLIVQATELVRSIVTEATETSAVEWSTLKQAMRDA 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|288958973|ref|YP_003449314.1| metallo-beta-lactamase [Azospirillum sp. B510] gi|288911281|dbj|BAI72770.1| metallo-beta-lactamase [Azospirillum sp. B510] Length = 561 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 215/556 (38%), Positives = 318/556 (57%), Gaps = 8/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L FLPLGG GEIGMN+ LYG+ KW+M+D G+SF D +PG+D++ PD FI Sbjct: 12 EEDALYFLPLGGSGEIGMNLNLYGH----RGKWLMVDLGISFADDTMPGLDVIMPDPAFI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R +L+ + +THAHEDH GA+ LW L PVY +PF L AK + +S +P Sbjct: 68 AERRADLVGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAFLRAKLHEKGLSSTVPIH 127 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G V+VG FS+E V + HSIPE AL IR+ G ++HTGDWKLD D ++G+ D+ Sbjct: 128 EIPLGGTVEVGPFSVEYVTMTHSIPEPNALAIRTSAGTVLHTGDWKLDPDPLVGETADEA 187 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRI 240 L AIG+EG+LAL+ DSTNA+ G SE ++ + ++ + + V+ F+++V+R+ Sbjct: 188 RLRAIGDEGVLALVGDSTNALVPGAAGSEATVRATLMELFGRYRDRRIAVSCFATNVARL 247 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 SI A R + L+G SL R+ A G + FLS+ PRE+L++I TG Sbjct: 248 ESIAAAAAAHDRHVALVGRSLWRINEAARATGYLADVPKFLSEHDASYLPREKLVLICTG 307 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPRSALA+++ + V L+ D VIFSSR IPGNE AIG ++N+LV QGV ++ Sbjct: 308 SQGEPRSALARIAANDHPQVTLSRGDVVIFSSREIPGNERAIGRMQNQLVAQGVELVT-A 366 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++L RMYQW+RP++ V +HGE H AH LA +A NG+ Sbjct: 367 DEAAVHVSGHPARDELVRMYQWVRPRIAVPVHGEQRHQQAHAALAEDCQVAHSIVPANGE 426 Query: 421 MLRLF-PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +LRL P+ ++ V G DG + + R ++ G V +++ + Sbjct: 427 LLRLDGPEGARVVATVRAGRMAVDGKRLVPLDTGMMRARNRMVNNGAAVVTLVMTATGEL 486 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ +G+ D + ++ V +V LP+ R D ++E+ A+R Sbjct: 487 LTAPQLAVMGLVDEATDRDLLLD-VVDAVRESVAMLPKSARADDAQVKEAARIAVRRCFN 545 Query: 540 KVWGKKPLVTVFINKI 555 GKKP+ V + ++ Sbjct: 546 ASHGKKPVTEVHLVRV 561 >gi|222085592|ref|YP_002544122.1| metallo-beta-lactamase family protein [Agrobacterium radiobacter K84] gi|221723040|gb|ACM26196.1| metallo-beta-lactamase family protein [Agrobacterium radiobacter K84] Length = 557 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 324/555 (58%), Positives = 427/555 (76%), Gaps = 1/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG+P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGTPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 KERKNL I ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR YE+ +IP Sbjct: 63 AKERKNLKGIIITHAHEDHYGALSDLWPGLNVPVYASGFTAGLLEAKRDYEKTMGQIPIT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AGD+++VG FSIE V VNHSIPE M+L+IR+PVGN++HTGDWK+D + LG +TD+ Sbjct: 123 PFKAGDRINVGPFSIEGVAVNHSIPEPMSLMIRTPVGNVIHTGDWKIDHEPSLGPLTDEA 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G+EG+LALMCDSTNA+R+G SEK + ++ I++NA+G V +TTFSS+V RIR Sbjct: 183 RFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSASLRKIIENAEGRVAITTFSSNVGRIR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I + AE GR+I+LLGSSLKRVV V+ D+GI++ + F++++ +G PR+++++I TGS Sbjct: 243 TIAEAAEAAGREILLLGSSLKRVVDVSRDIGIMEGLKPFIAEDEYGYIPRDKVVIILTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EMR+V LA D V+FSSRAIPGNE AI IKN L EQGV V+ + Sbjct: 303 QGEPRAALAKLSRDEMRHVALAAGDIVVFSSRAIPGNEKAIQDIKNGLTEQGVHVVTDA- 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP N+L++MY+W RP+V+V +HGEP HL AHKELA Q GIA VP VRNG + Sbjct: 362 EALVHVSGHPRRNELQKMYEWTRPKVVVPVHGEPTHLAAHKELAEQSGIAIVPKVRNGDI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P +E+I + HG KDG LIG F ++GI +R++LS+VGH++VNV+LD Y+I G Sbjct: 422 LRLAPGSVEVIGQAPHGRIFKDGILIGDFDEMGIGERKKLSYVGHVAVNVVLDARYDIVG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+IV IG+PAYD +G ++ L V++ + +P+ RRKD+ +L+E+ A+R+ Sbjct: 482 DPDIVAIGLPAYDDEGEEMEDTLFDAVVSAIESIPRARRKDIDMLQEAARRAVRAAANHG 541 Query: 542 WGKKPLVTVFINKIS 556 WGKKP+VTVF+ +++ Sbjct: 542 WGKKPVVTVFVTRMA 556 >gi|297189904|ref|ZP_06907302.1| beta-lactamase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150306|gb|EDY62468.2| beta-lactamase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 554 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 169/553 (30%), Positives = 286/553 (51%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 12 LRVVALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++ I +TH HEDH G + L +PV S + LEAK + + + + Sbjct: 68 DDVVGIVLTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLEAKLKEHGIRPRPVRV--R 125 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 126 EGDRRGFGPFDCEFVAVNHSIPDSLAVAIRTSAGMVLHTGDFKMDQFPLDDRITDLRAFA 185 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 186 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 245 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L + + P ++ ++ TGSQG Sbjct: 246 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVGMKDLEQLPEHKVTLVCTGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 306 EPMAALSRMANRDHV-IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGANVVHKG-NA 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 364 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANGDLAVRTGVDPDRVVIAEDGVV 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 424 VDLVDGRASITGKVPAGNVYVDGMTVGGATEASLKDRVTLAEEGVVTVVAIVDADTGALA 483 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D L + I+ A+ + + Sbjct: 484 EAPDFLARGFVHDDSTFEPVIP----VIEKTLAKAAEEGVGDAHQLEQLIARAVANWAFR 539 Query: 541 VWGKKPLVTVFIN 553 + +KPL+ I Sbjct: 540 TYRRKPLIIPVII 552 >gi|229824999|ref|ZP_04451068.1| hypothetical protein GCWU000182_00348 [Abiotrophia defectiva ATCC 49176] gi|229790746|gb|EEP26860.1| hypothetical protein GCWU000182_00348 [Abiotrophia defectiva ATCC 49176] Length = 645 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 191/555 (34%), Positives = 306/555 (55%), Gaps = 14/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ IGMN+ + Y I++DCG+SFP+DD+ G+D V P++ ++ K Sbjct: 98 LKIIPLGGLEHIGMNITAFEY----EDSIIVVDCGMSFPEDDMLGIDCVIPNVNYLKKNI 153 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + ITH HEDH GAL + ++VPVYA+ + ++E+K + K + Sbjct: 154 DKVKGFVITHGHEDHIGALPYILKDINVPVYATRLTVAIIESKLSERNMLKTTKRKIVKY 213 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +++G F IE +R NHSI + AL I SP+G I+HTGD+K+D + GD D Sbjct: 214 GQSINLGCFRIEFIRTNHSISDAAALAIYSPIGTIIHTGDFKVDYTPVFGDPIDLQRFGE 273 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRIRSII 244 IG +G+LALMC+STN ++ G +SE+ + K +I + K ++V TF+S+V R++ II Sbjct: 274 IGRKGVLALMCESTNVLKPGFTMSERSVGKTFDNIFADNKNNRIIVATFASNVDRVQQII 333 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + AE GRK+V+ G S+ ++++A ++G I K+ ++ + Y EQL++I TGSQG Sbjct: 334 NSAENFGRKVVVDGRSMVNIINIARELGYINIKENTLINIDQMKDYSDEQLVLITTGSQG 393 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ + V + DT++FSS IPGNE ++ + N L +G +VI + Sbjct: 394 EAMAALSRMAASIHKKVSIKPGDTIVFSSTPIPGNEKSVSKVINELYLKGAKVIFQ---- 449 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 HVSGH ++K MY IRP+ + IHGE HLV H ELA + GI + ++NG + Sbjct: 450 DAHVSGHACQEEIKLMYSLIRPKYSIPIHGEYRHLVRHAELAEEMGILKENIFILKNGNV 509 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI-F 480 L + D ++ID++ + DG IG + + R++LS G + V ++ N+ Sbjct: 510 LEIKEDGGKVIDQIECKGIMVDGLGIGDVGNSVMRDRQKLSEDGLVIVTFAMEKGSNLMV 569 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 EIV G Y + I K L TV ++ + +R I AL + K Sbjct: 570 SDAEIVTKGF-IYVKESDTILKDALNTVNEALIRCQDKGTIERNKIRNEIRDALSDFIWK 628 Query: 541 VWGKKPLVTVFINKI 555 + P++ I + Sbjct: 629 HTKRSPMIITIITDV 643 >gi|254456696|ref|ZP_05070125.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083698|gb|EDZ61124.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] Length = 552 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 206/554 (37%), Positives = 320/554 (57%), Gaps = 4/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL+F PLGG GEIGMNM L+GYG PS KWIM+D GV+F D +PGVDL++PD FI+ Sbjct: 2 KDELLFCPLGGSGEIGMNMNLFGYGQPSDHKWIMVDIGVTFADDTIPGVDLIYPDPGFIV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + R NL+ I +THAHEDH GA+ LW L +YA+PF L++ K +++ Sbjct: 62 ERRDNLLGIVLTHAHEDHIGAIAHLWPQLKCKIYATPFTAVLIKEKFKEKQIDITKDLKI 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + KV + F IE + + HSI E L I++P G+I+HTGDWK+D + ++GD +++ Sbjct: 122 VELNGKVSLDPFEIEYITLTHSILEPNGLKIKTPAGSILHTGDWKVDPNPLVGDKINQER 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LA++CDSTN G SE ++KN+ ++M K +++T+F+S+V+R+ + Sbjct: 182 LKQIGEEGVLAMICDSTNVFSAGRSGSELDVRKNLLNVMTRLKKRIIITSFASNVARMET 241 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 AE+ GR+I L+G S+ R+ A G +K + + RE+++ + TGSQ Sbjct: 242 AFYCAEKTGRQISLVGRSMHRIYKAARQCGYLKNTIEPIDAREAKNFSREKIVYLCTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP A+ ++S +V + + D VIFSS+ IPGNE + + N+LV+ G+ VI+E+ E Sbjct: 302 GEPMGAMMRISSYIHPDVFIEKGDAVIFSSKIIPGNEKKLYKLHNQLVKDGIEVISEETE 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +HVSGHP DLK MY W++P+ ++ +HGE H++ H A + + V NG ++ Sbjct: 362 F-IHVSGHPNREDLKDMYNWVKPKCVIPVHGEHRHMIEHINFAKEMQVPHPVQVENGDIV 420 Query: 423 RLFP-DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +L+P D E+ D+ G DG + I R+ LS G++ V +++ NI Sbjct: 421 KLYPGDKPEVYDKAPSGRLYLDGSISVDGDSQSIKDRKNLSANGYMEVTIIITPKGNIHN 480 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G+P YD D + L + T R+ L +++ A R K+ Sbjct: 481 NPVLSYRGLPVYDKD--EFDYGLEYEIEKTTRSFKVGSRQQEHNLIDALKIACRKFSKEK 538 Query: 542 WGKKPLVTVFINKI 555 GKKP + + +I Sbjct: 539 TGKKPFTNINLVRI 552 >gi|71904249|ref|YP_281052.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|71803344|gb|AAX72697.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] Length = 560 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 276/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK + F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPNGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 539 FLYEKTEREPIIIPMVLTPDKH 560 >gi|329940590|ref|ZP_08289871.1| beta-lactamase domain-containing protein [Streptomyces griseoaurantiacus M045] gi|329300651|gb|EGG44548.1| beta-lactamase domain-containing protein [Streptomyces griseoaurantiacus M045] Length = 619 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 168/553 (30%), Positives = 288/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 77 LRVTALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 132 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + L+AK + + + + Sbjct: 133 DDIVAVVLTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLDAKLKEHGIRPRTVRV--R 190 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 191 EGDRRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHTGDFKMDQFPLDDRITDLRAFA 250 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 251 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 310 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L +S + P ++ ++ TGSQG Sbjct: 311 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVSTKELEKLPDHKITLVCTGSQG 370 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 371 EPMAALSRMANRDHV-IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 428 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 429 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANADLAIRTGVDPDRVVIAEDGVV 488 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 489 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLALAAEGVVTVVAIVDADTGALA 548 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 549 EAPDFLARGFVHDDATFEPVIP----VIEKTLATAAEEGVGDARQLEQLVARAVANWAFR 604 Query: 541 VWGKKPLVTVFIN 553 + +KPL+ I Sbjct: 605 TYRRKPLIIPVII 617 >gi|116749032|ref|YP_845719.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698096|gb|ABK17284.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 561 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 302/555 (54%), Gaps = 11/555 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+NM + Y ++ID G+ FP++D+ G+D+V PD T++ K R Sbjct: 13 LKIIPLGGLGEIGLNMMVLEY----EDTIVVIDAGLMFPEEDMLGIDIVIPDFTYLQKNR 68 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +TH HEDH GA+ L + VP+YA+ + L++ K + ++ + Sbjct: 69 NRVRALLVTHGHEDHIGAIPFLLREVPVPIYATTLTLALIKEKLKEHGLLERSELCRVEP 128 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + +G F IE ++V HSIP+ + L IR+PVG I+H+GD+K+D+ + G D Sbjct: 129 RETIGIGPFDIEFIQVCHSIPDGVGLAIRTPVGVIIHSGDFKIDNTPVDGRRFDMARFGK 188 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G +G+LAL DSTN R G +SEK + + DI + G ++V F+S++ RI+ ++ Sbjct: 189 YGEQGVLALFADSTNVERPGYTLSEKDVGATLRDIFRECSGRIIVAVFASNLHRIQQVVQ 248 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A + GR+++L G S+ V +A ++G I ++ + P +++++ TGSQGE Sbjct: 249 LAREFGRRVLLNGRSMVINVRIARELGYIDFPGDDEITLQDLAYLPDSEVLMLTTGSQGE 308 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL +++ + + +K+ DT++ SS+ IPGNE I +I N L G VI E Sbjct: 309 PMSALTRMAFNDHKKLKVKPGDTIVLSSKFIPGNERTIQNIINHLYRHGAEVIYEQVR-D 367 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +HVSGH Y +LK M ++P + +HGE HLV H++LA+ G+ + NG ++ Sbjct: 368 IHVSGHAYREELKAMINVVQPNYFIPVHGEFRHLVKHRQLAVDTGVPEENCLLIENGGVV 427 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 +PD + + V G L DG +G L + RR LS G + +++ + + Sbjct: 428 EFYPDGVLTGEHVETGRVLVDGKGVGDVGGLVLRDRRHLSEDGMVIASLVFNKETQELVS 487 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G ++ ++ + T+ L + D +L+E I L+ + Sbjct: 488 GPDILSRGF-IHEEAKPELLDDAKCVIFETIDKQLSEGAELDCTVLQEDIRRELKRFFNR 546 Query: 541 VWGKKPLVTVFINKI 555 V ++P++ + +I Sbjct: 547 VLDRRPVIYPIVVEI 561 >gi|323353506|ref|ZP_08088039.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|322121452|gb|EFX93215.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|327472920|gb|EGF18347.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK408] Length = 560 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 QMILAGPDILSRGF-IYMRESGDLIRQSQRLLFNAIRIALKNKDANIQSVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYENTEREPIIIPMVLTPDED 559 >gi|262281855|ref|ZP_06059624.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus sp. 2_1_36FAA] gi|262262309|gb|EEY81006.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus sp. 2_1_36FAA] Length = 560 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELKFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ + YP +++++ T Sbjct: 240 QQAAEAAVKAGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNAIKDYPASEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 QMILAGPDILSRGF-IYMRESGDLIRQSQRLLFNAIRIALKNKDANIQSVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYENTEREPIIIPMVLTPDED 559 >gi|322392476|ref|ZP_08065936.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321144468|gb|EFX39869.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 560 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + HSIPE + +VI +P G IV TGD+K D + D D Sbjct: 121 YEINHNTELTFKHLKATFFKTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-DPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEILILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTITEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVVAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMIISGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDATVQSINGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 538 FLYENTEREPIIIPMVLTPDEE 559 >gi|310779505|ref|YP_003967838.1| RNA-metabolising metallo-beta-lactamase [Ilyobacter polytropus DSM 2926] gi|309748828|gb|ADO83490.1| RNA-metabolising metallo-beta-lactamase [Ilyobacter polytropus DSM 2926] Length = 604 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 291/562 (51%), Gaps = 14/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G NM L Y + I++D G++FP D+L G+DLV PD ++I Sbjct: 49 KEEKMYVIPLGGLDEVGKNMTLVQY----RDEIIILDAGLTFPDDELLGIDLVIPDFSYI 104 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-I 118 + + +FITH HEDH G + L++ + VP+Y + L ++K SK Sbjct: 105 ESNKNKIKGLFITHGHEDHIGGIPYLYNKIDKSVPMYGGKLTLALAKSKFDNPGFSKVLP 164 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + K+ VG F++E ++V HSI + AL I +P G IVHTGD+K+D + G Sbjct: 165 KMKEIKGRSKIKVGKYFTVEFIKVTHSIADAYALAITTPAGVIVHTGDFKIDLTPVDGVG 224 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L +G++G+ L+ DSTN+ EG SEK + + + AKG ++ +F+S + Sbjct: 225 VDFSRLAQLGDQGVDLLLSDSTNSEVEGFTPSEKSVGEAFRQEFEKAKGRIIAASFASHI 284 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ IID+A Q RKI + G S+ RV +A +G +K + L +S G +++++ Sbjct: 285 HRLQQIIDVAHQYKRKIAIDGRSMVRVFEIASKLGYLKIPEGLMVSLHEVGKLKEDKVVI 344 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG+QGEP +AL+++++ +++KL + DTVI S+ IPGNE A+ + N L++ V Sbjct: 345 LCTGTQGEPLAALSRIAKDMHKHIKLRKGDTVIISATPIPGNERAVYNNINNLLKHDAEV 404 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + +HVSGH ++ K M I+P+ + +HGE L AHK+ A++ G+ + Sbjct: 405 VFRKI-AGIHVSGHASKDEQKLMLNLIKPRHFMPVHGEYKMLKAHKQTAIETGVVEKKIL 463 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 NG + + +I +V G L DG +G ++ + R+QL G + V + + Sbjct: 464 IAVNGSKIEVTKSYAKIAGKVSAGAILVDGLGVGDIGNIVLRDRQQLGQDGVVIVVLTIS 523 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+IV G Y + K+ + + + + + L+ Sbjct: 524 KETGMILAGPDIVTRGF-VYSRESEKMINEAALCIKEKLKSYEEKKITEWAALKTVTKDV 582 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 583 ASKYFYDKIQRNPVILPIIMEV 604 >gi|301801087|emb|CBW33755.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] Length = 559 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HCMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKS 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|296269064|ref|YP_003651696.1| beta-lactamase domain-containing protein [Thermobispora bispora DSM 43833] gi|296091851|gb|ADG87803.1| beta-lactamase domain protein [Thermobispora bispora DSM 43833] Length = 561 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 179/557 (32%), Positives = 296/557 (53%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGG+GEIG NMA++ +G + ++IDCGV FP+ D PGVDL+ PD +I Sbjct: 17 DGLRIVPLGGLGEIGRNMAVFEFG----GRLLVIDCGVLFPEPDQPGVDLILPDFDYIRG 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ A+ +THAHEDH GA+ L +P+ S +GL++ K R+ + + Sbjct: 73 RLDDIEALVLTHAHEDHIGAVPYLLRERRDIPIVGSRLTLGLVDVKLSEHRL--QAVKVE 130 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ G F E + VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD + Sbjct: 131 VAENERRRFGPFDCEFIAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDGRLTDLGA 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ LM DSTNA G SE+ I I +I + A+ ++V F+S V R++ Sbjct: 191 FARLGAEGVDLLMSDSTNAEVPGFVTSEREIAPVIDEIFRTAEKRIIVACFASHVHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I+D A++ GRK+ L+G S+ R + VA D+G +K L + P E +++I TGS Sbjct: 251 IMDAAQRHGRKVALIGRSMVRNMGVARDLGYLKVPPGLLVDSREVEELPPESVVLICTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ + +++A DTV+ +S +PGNE A+ + N L G RV+ Sbjct: 311 QGEPMAALSRMANRDHP-IRIAAGDTVLLASSLVPGNESAVNKVINGLSRWGARVVH-RG 368 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH +L + +P + IHGE HL AH +LA G+ + +G Sbjct: 369 NARVHVSGHAASGELLYVLNLTKPSNFMPIHGEWRHLRAHAKLASLTGVPEENIVIAEDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L I+ V G DG +G D+ + RR L G +S+ V++D+ Sbjct: 429 VVVDLVDGRARIVGAVPCGYVFVDGTSVGDITDVALKDRRILGDEGFISIVVVVDSTTGK 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + G PEI G G + ++ + + + D LR ++ + + Sbjct: 489 LAGGPEITARG----SGIEPEAFDAVIPQIEQALHEAAASGVTDPTQLRRTVRRTVGRWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + + ++P++ + ++ Sbjct: 545 HETYRRRPMIIPVVIEV 561 >gi|94989230|ref|YP_597331.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94993118|ref|YP_601217.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94542738|gb|ABF32787.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94546626|gb|ABF36673.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] Length = 560 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 274/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ + +++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEALIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 539 FLYEKTEREPIIIPMVLTPDKH 560 >gi|317062007|ref|ZP_07926492.1| Zn-dependent hydrolase [Fusobacterium ulcerans ATCC 49185] gi|313687683|gb|EFS24518.1| Zn-dependent hydrolase [Fusobacterium ulcerans ATCC 49185] Length = 552 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 291/558 (52%), Gaps = 14/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ E+G NM + Y + I+ID GV+FP D+L G+DLV PD +FI + Sbjct: 1 MYVIPLGGLEEVGKNMTVIQY----RDEIIIIDSGVTFPDDNLLGIDLVIPDFSFIENNK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-IPCIS 122 + +FITH HEDH G++ L+ + VP++ + L ++K SK+ Sbjct: 57 DKVKGLFITHGHEDHIGSIPYLYQKIDKSVPMFGGKLTLALAKSKFDNPGFSKELPKMKE 116 Query: 123 FQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + KV VG F++E ++V HSI + +L I SP G + HTGD+K+D + + D Sbjct: 117 VKGRSKVKVGKYFTVEFIKVTHSITDAYSLAISSPAGVVFHTGDFKIDLTPVDSEGVDFA 176 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG +G+ ++ DSTN+ EG SE+ + + AKG ++V F+S V R++ Sbjct: 177 RLSQIGEQGVDLMLSDSTNSEVEGFTPSERSVGEAFKQEFSKAKGRIIVAAFASHVHRLQ 236 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ AE+ GR+I + G SL +V +A ++G ++ + + ++ +++++ TG Sbjct: 237 QIINTAEEYGRRIAIDGRSLVKVFEIASNLGYLRIPEGMMVALSEVDGLKDNKVVILCTG 296 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A+ + N L++ V+ + Sbjct: 297 TQGEPMAALSRIAKNMHKHIKIKEGDTVIISATPIPGNEKAVSNNINNLLKYDAEVVFKK 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH ++ K M I+P+ + +HGE L AHK+ A++ G+ V +N Sbjct: 357 I-AGIHVSGHGSKDEQKLMLNLIKPRYFMPVHGEHKMLKAHKDTAIETGVPKNNVIIAQN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + ++I +V G L DG +G ++ + R+QLS G + + Sbjct: 416 GSKVEVTKSAVKIKGKVNAGSTLVDGLGVGDIGNIVLKDRQQLSQDGVVVIVFTTSKETG 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+IV G Y + I K ++ + + ++ KD + + Sbjct: 476 KIIAGPDIVTRGF-VYSKESDDIIKEAIEAIKAKLSNIEGHSTKDWNTFKNTTRDIASKY 534 Query: 538 LKKVWGKKPLVTVFINKI 555 + P+V I +I Sbjct: 535 FYNKTKRNPVVLPIIMEI 552 >gi|21911156|ref|NP_665424.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS315] gi|28895159|ref|NP_801509.1| Zn-dependent hydrolase [Streptococcus pyogenes SSI-1] gi|21905367|gb|AAM80227.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810404|dbj|BAC63342.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 560 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 165/562 (29%), Positives = 275/562 (48%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPNEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + ++ Sbjct: 62 IVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREATV 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G I+ TGD+K D + D D Sbjct: 122 YEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKIHAGLAMDIGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + + Sbjct: 539 FLYEKTEREPIIIPMVLTPDKH 560 >gi|116511138|ref|YP_808354.1| mRNA degradation ribonuclease J1/J2enzyme [Lactococcus lactis subsp. cremoris SK11] gi|116106792|gb|ABJ71932.1| RNase J1 [Lactococcus lactis subsp. cremoris SK11] Length = 561 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 275/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I+ID G+ FP+DDL GVD V PD T+ Sbjct: 7 IKADEVAVYAIGGLGEIGKNTYGVEY----KDEIIIIDAGIKFPEDDLLGVDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + +FITH HEDH G + L ++P+YA P ++ L+ K + + Sbjct: 63 IVENIDRIKGLFITHGHEDHIGGIPFLLKQANIPIYAGPLSLALIRGKLEEHGLLRDAKL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A + S++ R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 123 YEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQGKIVATGDFKFDFTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L L+ DSTNA SEK + +I I + +G ++ +F+S++ R+ Sbjct: 182 HRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASIMKIFERIEGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +D A + GRKIV+ G S+++ + +++G IK F+ Y +L+++ T Sbjct: 242 QQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIKAPKGTFIEPNEVNQYASHELLIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R++ L DTV+FSS AIPGN + + N++ E GV VI Sbjct: 302 GSQGEPMAALSRIANGMHRHITLQMGDTVVFSSNAIPGNTHGVNQLINKIAEAGVEVIYG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE L H LA G+ Sbjct: 362 KMN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMLKIHAGLAQDTGVPKENCFIQE 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D D DG IG + + R +LS G + +D Sbjct: 421 NGDVLALTADSARYADHFPAADTYVDGSGIGDVGNAVLHDRHELSEDGIVLAVATVDFKK 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + G + + + + + + + + ++ AL Sbjct: 481 KTVLAGPDMLSRGF-IYMRESGDLIRSGQRVLFNAIREAMHEENANEASVARAMREALSP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + PLV I Sbjct: 540 FLYKQTERSPLVVPMIM 556 >gi|330813999|ref|YP_004358238.1| metallo-beta-lactamase family protein, RNA-specific [Candidatus Pelagibacter sp. IMCC9063] gi|327487094|gb|AEA81499.1| metallo-beta-lactamase family protein, RNA-specific [Candidatus Pelagibacter sp. IMCC9063] Length = 556 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 204/553 (36%), Positives = 321/553 (58%), Gaps = 1/553 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ELVF PLGG GEIGMNM LYGYGS +KWIMID GV F D +PG+DL+ D F++ Sbjct: 5 KNELVFCPLGGAGEIGMNMNLYGYGSQDEKKWIMIDIGVGFTDDSVPGIDLMVADPDFVV 64 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +K+L+ I +THAHEDH GA+ LW L P+YA+PF L++ K +RV Sbjct: 65 QRKKDLLGILLTHAHEDHIGAIAHLWPLLECPIYATPFTASLIKEKLREKRVQIGENLKI 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 Q V++G F I+ V + HSI E AL I++P G + HTGDWK D + ++G+ D+ Sbjct: 125 IQLNGNVNLGPFDIDYVSLTHSILEPNALSIKTPAGTLFHTGDWKCDSEPLIGEKMDEGK 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG++G+LA++CDSTN EG SEK ++ ++ IM+N K ++VTTF+S+ SR+ + Sbjct: 185 LKDIGDKGVLAMICDSTNIFSEGRSGSEKDVRDSMMTIMENIKNRIVVTTFASNASRMET 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + AE+ GR + L+G S+ R+ + A D G ++ + L PR +++ + TGSQ Sbjct: 245 VFKCAEKAGRHLSLVGRSMHRIYNTARDCGYLQDIKPPLDPRDAKKIPRNKIVYLCTGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP A+ ++ E +V L + DTVIFSSR IPGNE + + N LV++ + V++E Sbjct: 305 GEPMGAMNRIVNEEHPDVFLDKDDTVIFSSRIIPGNEKKLFKMHNILVKREINVLSE-DN 363 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +HVSGHP +++K MY WIRP++ + +HGE HL H + A +G+ + NG ++ Sbjct: 364 AFIHVSGHPARDEMKDMYSWIRPKIAIPVHGEHRHLKEHYDFAKLQGVKHPALIENGDII 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 +++P +IID+V +G L DG + + R+ ++ G + V +L+ + Sbjct: 424 KIYPGEPKIIDKVHNGKMLVDGNRLIDEDSRFLKDRKNIASNGLMDVTLLISKKGQLDRN 483 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P I G+P + + +I L ++ +K K L + + S L+ ++ Sbjct: 484 PIINLRGLPLNEEEFDEILYDLEDEIVNITSTYSLNNKKQEKNLIDGLKSNLKKIIYSKT 543 Query: 543 GKKPLVTVFINKI 555 K+P + + ++ Sbjct: 544 KKRPYTNIILIRL 556 >gi|312879542|ref|ZP_07739342.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] gi|310782833|gb|EFQ23231.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] Length = 593 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 180/557 (32%), Positives = 303/557 (54%), Gaps = 10/557 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 EL ++PLGG+GEIG N++ + YG + +++DCG+ FP++++ G+D V PD ++++ Sbjct: 31 ELRWVPLGGMGEIGKNLSFFEYG----EEILVVDCGLKFPEEEMLGIDFVIPDAQYLVEN 86 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + IF+TH HEDH G L + L VPVY + +GL+E K + + + Sbjct: 87 RHRIQGIFLTHGHEDHIGGLPFILPKLDVPVYGTRLTLGLVENKLNEACPRYRPKLVEIR 146 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 AG+ G+FS++ + V HSIP+++ IR+PVG +VHTGD+KLD I G +TD + Sbjct: 147 AGETTQAGSFSVQGISVCHSIPDSLGFAIRTPVGLVVHTGDFKLDATPIDGRITDYSAFA 206 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRSI 243 +G EG+L L+ DSTN REG SE+ + + + + K ++++TF+S++ R + + Sbjct: 207 ELGKEGVLLLLSDSTNVEREGFTASERTVGQTFEQLFRLYKDRRIVISTFASNLHRAQQV 266 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 A + RK+ L+G S+ V +A +G + D LF+S + P +L+V+ TGSQ Sbjct: 267 FQTAARYNRKVALVGRSMISYVELARKLGYVDAPDDLFISQQDIESTPPNRLVVLTTGSQ 326 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP S L +S+GE R ++L KD V+ S+ IPGNE + N L G V+ + ++ Sbjct: 327 GEPFSGLVLMSKGEHRQIRLGSKDLVVISATPIPGNEKLVSRTVNLLFACGAEVVYDRSQ 386 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH +LK + +RP+ A+HGE H V H +LA + G+ V + NG Sbjct: 387 A-IHVSGHASKEELKIILSLVRPKCFAAVHGEYRHQVRHVQLARELGVPAKQVFVLTNGD 445 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +L+L +I V G L DG +G+ + +RR+L+ G +++++++D + I Sbjct: 446 VLKLVDGKGQISGRVPSGSVLVDGVALGESEGSLLRERRELAEDGLIALSLVVDEQFRIA 505 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 I G + D +++ + V + L D + I LR +L + Sbjct: 506 SPISIESKGFL-HCQDAKDLYREMEGAVRKALEPLAGHPETDPDSVPTLIRKKLRDVLSR 564 Query: 541 VWGKKPLVTVFINKISR 557 P + + ++ + Sbjct: 565 YSRTYPTLIPLVTRLGQ 581 >gi|157151588|ref|YP_001449538.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus gordonii str. Challis substr. CH1] gi|157076382|gb|ABV11065.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus gordonii str. Challis substr. CH1] Length = 560 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 164/562 (29%), Positives = 279/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELKFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ + YP +++++ T Sbjct: 240 QQAAEAAVKAGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNAIKDYPASEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + +++ + +I +ALR Sbjct: 479 QMILAGPDILSRGF-IYMRESGDLIRQSQRLLFNAIRIALKNKDANIQSVNGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYENTEREPIIIPMVLTPDED 559 >gi|239945775|ref|ZP_04697712.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] gi|239992246|ref|ZP_04712910.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 11379] gi|291449231|ref|ZP_06588621.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] gi|291352178|gb|EFE79082.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] Length = 561 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 167/553 (30%), Positives = 287/553 (51%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ Y K +++DCGV FP++ PGVD++ PD T I Sbjct: 19 LRVVALGGLGEIGRNMTVFEYA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++ + +TH HEDH G + L +PV S + LEAK + + + Sbjct: 75 DDVVGVVLTHGHEDHIGGVPYLLRERRDIPVIGSKLTLAFLEAKLKEHHIKPVTVRV--K 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ D G F E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 133 EGERRDFGPFGCEFVAVNHSIPDGLAVAIRTGAGMVLHTGDFKMDQFPLDDRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 193 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEHVMRTAPRRVIVSSFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A ++G ++ L + P ++ ++ TGSQG Sbjct: 253 DAAHQHGRKVAFVGRSMVRNMGIARELGYLRTPPGLVVEARELEKLPDHKITLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + ++++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-SIRIGQGDTVLLASSLIPGNENAIYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE H+ A+ +LA++ G+A V +G + Sbjct: 371 KVHVSGHASAGELVYCYNIVKPRHVMPVHGEWKHMRANADLAVRTGVAPDRVIIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + RR L+ G +++ ++D + Sbjct: 431 VDLVDGRASITGKVPAGYVYVDGMTVGGATEASLKDRRVLAEEGVVTIVAIVDADTGRLA 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G + ++ + T+ Q D L + I+ A+ S + Sbjct: 491 EAPDFLARGF----EHDDSTFEPVIPLIEKTLAAAAQEGIGDHHQLEQRIARAVASWAFR 546 Query: 541 VWGKKPLVTVFIN 553 +KPL+ + Sbjct: 547 SHRRKPLIIPVVI 559 >gi|289523297|ref|ZP_06440151.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502989|gb|EFD24153.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 602 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 181/562 (32%), Positives = 305/562 (54%), Gaps = 11/562 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L F+PLGGV IG N+++ YG ++IDCG+ FP +++ GVD V PD ++ Sbjct: 34 KSASLKFIPLGGVSGIGKNISVLEYG----DDILVIDCGLMFPDEEMLGVDFVIPDPAYL 89 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + + ITH H+DH GAL + L P+YA+ +GL+ ++ ++ Sbjct: 90 LANKERIRGMVITHGHDDHIGALPYILPELDCPIYATRLTLGLIRSRMEERAPKYELKAK 149 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 QAGD +D+G F ++ V HSIP+ + I +P+G ++HTGD+KLD I G TD Sbjct: 150 EIQAGDVIDLGCFKVQPFSVCHSIPDGVGYAIHTPLGVVLHTGDFKLDPTPIDGRATDYA 209 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 L ++G +G+L ++ DSTN R+G SE+ + K + + K +++++F+S++ R+ Sbjct: 210 LLASLGTKGVLLMLSDSTNVERDGFTPSERMVGKTMEQTFRLYKNKRIIISSFASNLHRV 269 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + RK+ L+G S+ V+ A ++G + D +F+ +P +L+VI T Sbjct: 270 QQVIETAVRFNRKVALIGRSMIANVARARELGYMDVDDDVFIQPSEIEGFPNNRLVVITT 329 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP S L +SRG+ R +KL KD V+ S+ IPGNE + N L +QG VI E Sbjct: 330 GSQGEPFSGLVLMSRGDHRFIKLGPKDLVVISALPIPGNERLVHRTINDLFKQGCEVIYE 389 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 E +HVSGH +LK + I+P V +HGE HLV HK+LA + G+ + Sbjct: 390 A-EQNIHVSGHASREELKMILSLIKPSYFVPLHGEYRHLVKHKQLAEEMGVPAKNAFVME 448 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G +L + I +V G ++ DG G + +R+ L+ G ++V+LD+ Sbjct: 449 EGDVLSITKRQARISGKVPAGAYIVDGRTYGDLKGGLLGERKDLAEEGVFCISVVLDSSG 508 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRR-KDLKLLRESISSALRS 536 N+ I G D ++++ + V V + +R + + L I SA++ Sbjct: 509 NVIAPLSIESRGFLHRV-DADELYRQIEDAVEKAVKAFAREKRDRKDEDLASRIRSAIKG 567 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 +L++ P++ V +N++ Sbjct: 568 VLRRYSLSSPVILVLVNEVKEN 589 >gi|322388535|ref|ZP_08062137.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321140653|gb|EFX36156.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 559 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 280/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKALLITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRNATL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 HEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEILILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I DG IG+ + RR LS G + +D Sbjct: 419 NGDVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +A+R Sbjct: 479 QMIISGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + Sbjct: 538 FLYENTEREPIIIPMILTPDEE 559 >gi|297626615|ref|YP_003688378.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922380|emb|CBL56952.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 561 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 283/557 (50%), Gaps = 15/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGG+G++G NM + + K +++DCGV FP+D+ PGVDL+ P + ++ Sbjct: 15 DTLRIIPLGGLGDVGRNMTCFE----VNGKILLVDCGVLFPEDNQPGVDLILPGLDYLEG 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +++ + +TH HEDH G + L +P+Y S + L+E K R+ + Sbjct: 71 RLGDVVGLVLTHGHEDHIGGVPYLLRMREDIPIYGSKLTLALVEGKLREHRIRH-AELHT 129 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + D+V + F +E V HSIP+ +A+ IR+ G ++HTGD+K+D + +TD Sbjct: 130 VKERDQVALDIFDLEFYAVTHSIPDALAVFIRTKAGTVLHTGDFKMDQLPLDHRITDLRG 189 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G EG+ L+ DSTNA G E+ I + + + ++V F+S V R++ Sbjct: 190 FAHAGEEGVDILLADSTNAEVPGFTPLERDILPALERVFAESTQKLVVACFASHVHRVQQ 249 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 II++A + RK+ +G S+ R +++A ++G +K L + YP +++++I TGS Sbjct: 250 IINLAVKHDRKVCYVGRSMVRNMAIARELGYLKVPGDLLIEMSKLNDYPDDKVVIICTGS 309 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ + + + DTV+F+S IPGNE A+ + N L G V+ Sbjct: 310 QGEPLAALSRIANRDHPVISIDAGDTVLFASSLIPGNENAVYRVVNGLTRMGAHVVH-RG 368 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNG 419 VHVSGH +L +Y ++P+ + +HGEP HLVA+ +LA+ G+ ++G Sbjct: 369 NAFVHVSGHSSAGELLYLYNIVKPRNALPVHGEPRHLVANADLAVATGVPRDRAIVAQDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ L I+ V DG +G + + RR L G +SV V +D + Sbjct: 429 DVVDLKKGRARIVGRVDASYIFVDGSTVGDITESALTDRRILGEEGFISVVVAVDLRDGS 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P++ G + I + + +V D+ L++ + + + Sbjct: 489 IVSGPDLSARGFL----EDPSIFDDVTARIAKSVRSALDEGVDDVHRLQQVVRRTVGQWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 545 SNTYRRRPMIVPVVIAV 561 >gi|327468630|gb|EGF14109.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK330] Length = 560 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 278/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPKEVGVFAIGGLGEIGKNTYGIEY----QNEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVENIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A + GRKI + G S+++ + I++G IK F+ YP +++++ T Sbjct: 240 QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKDTFIEPNELKDYPAGEVLIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ G+ + + Sbjct: 360 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGECRMQKVHAGLAVDTGVPKDNIFIMS 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG+ + R+ LS G + +D Sbjct: 419 NGDVLALTADSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFES 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 479 KMILAGPDILSRGF-IYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVSGAIVNALRP 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ + Sbjct: 538 FLYESTEREPIIIPMVLTPDED 559 >gi|308173641|ref|YP_003920346.1| ribonuclease J2 [Bacillus amyloliquefaciens DSM 7] gi|307606505|emb|CBI42876.1| ribonuclease J2 [Bacillus amyloliquefaciens DSM 7] Length = 567 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 292/558 (52%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PDI+++ Sbjct: 17 NTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPDISYL 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 73 VERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKADLR 132 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + + + HSIP+++ + ++ +G+IV TGD+K D D Sbjct: 133 EVHSKSVITFESTKVSFFKTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPAYHQSCDIG 192 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IGN G+LAL+ DS NA R G SE + I D M ++ V+V F+S+++RI+ Sbjct: 193 EIAKIGNSGVLALLSDSANAERPGYTPSEADVSGEISDAMYISENRVIVAVFASNINRIQ 252 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A Q GRK+ + G +L+ V+ +A +G I+ D+LF+ + YP+ ++ ++ G Sbjct: 253 QVIQAAAQNGRKLAIAGKNLQNVLQLARKLGYIEADDELFIPVQDVKKYPKREVAIVTAG 312 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 S GEP +AL ++++ + + + E DTV+ +S IPG+E+ N+LV G +VI Sbjct: 313 SHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELVYSKTVNQLVRAGAQVIF-- 370 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 A+ VHVSGH +LK M ++P+ L+ ++GE AH ++A + + + + Sbjct: 371 AQKRVHVSGHGSQEELKLMLNLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIFLIEK 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 431 GDVVEFRGQNVKIGDKVTYGNVLIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKK 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 N+ PEI+ G Y + + + V + V + + + L++++ AL Sbjct: 491 NLVSGPEIITRGF-VYVRESEGLIVQATELVRSIVTEATETSAVEWSTLKQAMRDALNQF 549 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 550 LYEKTKRKPMIIPIIMEV 567 >gi|227874505|ref|ZP_03992677.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus F0268] gi|227839649|gb|EEJ50107.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus F0268] Length = 662 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 176/559 (31%), Positives = 287/559 (51%), Gaps = 18/559 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ +IGMN+ + I++DCG++FP DD+ G+DLV PDI++I + Sbjct: 113 VKVIPLGGLDQIGMNITAIE----TEDTMIIVDCGLAFPTDDMLGIDLVIPDISYIKSKI 168 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + ITH HEDH GAL + ++VP+YA+ + L++ K V + K + + + Sbjct: 169 HKMKGFVITHGHEDHIGALPYVLQQINVPIYATKLTLALIQRKLVENGLDKLVKMKTMKF 228 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G V+ G +E V+ NHSI + AL I +P G I+HTGD+K+D + GD D Sbjct: 229 GQTVNFGDLKVEFVKTNHSIQDAAALAITTPAGVIIHTGDFKVDYTPVFGDQIDLQRFAE 288 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSII 244 +G G+LA++ DSTN+ + G +SEK + + I + ++V TF+S+V R++ II Sbjct: 289 LGKNGVLAMLSDSTNSQKPGFTMSEKTVGRTFDLIFAEHQNSRIIVATFASNVDRVQQII 348 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + RK+V+ G S+ V+SVA ++ I + + E+ YP EQ ++I TGSQG Sbjct: 349 DTAAKYKRKVVVEGRSMVNVISVASELEYIHIPEGTLIDIENLKDYPDEQTVLITTGSQG 408 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +AL++++ G R V + D V+ SS IPGNE A+ + N L + +VI + Sbjct: 409 ESMAALSRMASGMHRKVSIGPNDVVVMSSHPIPGNERAVDRVVNELCKLHAKVIMQ---- 464 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 HVSGH DLK +Y ++P+ V HGE H + LA G+ + NG + Sbjct: 465 DTHVSGHACAEDLKLLYSLVKPKYAVPFHGEFHHRRSAATLAESVGVDKDKCLMLDNGDV 524 Query: 422 LRLFPDPIEIID----EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 L + E+ +V G DG IG ++ + R+ L+ G + V + L+ Sbjct: 525 LEFTANGEEVSYSIKEKVQAGGVYVDGLGIGDVGNIVLRDRQNLAQNGIIVVVLTLEKYS 584 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+++ G Y + + + V V D D ++ I L Sbjct: 585 GHLMAGPDLISRGF-VYVRESEDLMEEARVAVQDVVDDCLCTHVSDWGKIKTQIKDGLSD 643 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I ++ Sbjct: 644 FLWKKIKRNPVILPVIMEV 662 >gi|56964190|ref|YP_175921.1| metallo-beta-lactamase superfamily hydrolase [Bacillus clausii KSM-K16] gi|56910433|dbj|BAD64960.1| metallo-beta-lactamase superfamily hydrolase [Bacillus clausii KSM-K16] Length = 555 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 287/558 (51%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG+GEIG N YG + I+ID G+ FP+D+L G+D V PD T++ Sbjct: 5 KNNQTAVFALGGLGEIGKNT----YGVQFQDEIILIDAGIMFPQDELLGIDYVIPDYTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R + +FITH HEDH G + L +++ VY A+GLL+ K + + Sbjct: 61 IKNRDKIKGLFITHGHEDHIGGIPYLLREINIDVYGGKLALGLLKGKLEEHGLLRSAKLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V S+ R HSIP++ +V+++P GNIVHTGD+K D + + + Sbjct: 121 EIAEDQVVKFTKTSVSFFRTTHSIPDSYGVVVKTPPGNIVHTGDFKFDFTPVG-EPANLT 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+L L+ DSTN+ +SE+ + ++I ++ + G ++ TF+S++ R++ Sbjct: 180 KMAKIGDEGVLCLLSDSTNSEIPTFTMSERKVGESINNVFQKVDGRIIFATFASNIHRLQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +I A GRK+ + G S++ +++ ++G I F+ P ++ ++ TG Sbjct: 240 QVIQAAVDYGRKVCVFGRSMESAITIGQELGYINAPKHTFIEHSQLNKLPDNKVTILCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R +++ DTV+FSS IPGN +++G I N+L G VI Sbjct: 300 SQGEPMAALSRIAFGTHRQIQIIPGDTVVFSSSPIPGNTLSVGKIINQLYRVGANVIHGP 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H SGH + K M + ++PQ + IHGE L H LA G+ + N Sbjct: 360 L-SDIHTSGHGGQEEQKLMLRLMKPQYFLPIHGEYRMLRTHNRLAQDCGVKEENCFIMDN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L L P+ ++ ++ G DG IG ++ + RR LS G + V V LD + Sbjct: 419 GDVLALHPNEAGVVGKIPSGSVYVDGNGIGDIGNIVLRDRRILSEEGLVIVVVSLDMKEF 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I+ G Y + G + K + + + + + ++ ++ L Sbjct: 479 KVTAGPDIISRGF-VYMRESGDLIHEAQKMLAKHLNSVMEKKTSQWSEIKNEMTELLGPF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 538 LYERTKRKPMILPIIMEV 555 >gi|316933908|ref|YP_004108890.1| RNA-metabolising metallo-beta-lactamase [Rhodopseudomonas palustris DX-1] gi|315601622|gb|ADU44157.1| RNA-metabolising metallo-beta-lactamase [Rhodopseudomonas palustris DX-1] Length = 556 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 238/555 (42%), Positives = 360/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +E F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PDI F Sbjct: 3 RPDEFTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE+KNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L AK ER + KIP Sbjct: 63 LEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLGCPIYATKFSASLFAAKLAAERTTLKIPI 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +D+G FS+E + V HSIPE+ AL IR+ VG ++HTGDWK+D ++G TD+ Sbjct: 123 TEVPSGGTIDLGPFSVEFIPVAHSIPESHALAIRTSVGTVLHTGDWKIDPTPVVGAPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + ++ ++K+AKG V VTTF+S+V R+ Sbjct: 183 ARLRQLGDEGVLALIGDSTNAVRDGRSPSETEVAASLAGLIKSAKGRVAVTTFASNVGRL 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + A+ GR++VL+G ++ RV VA + G + Q F E +G +P ++++ + TG Sbjct: 243 RAVAEAAKAAGREVVLVGRAMDRVAQVARETGHLDGVQSFRGPEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++R + + L + D VIFSSR IPGNE A+G I N LV QG+ VI + Sbjct: 303 SQGEPRAALARIARDDHPEITLNKGDCVIFSSRTIPGNEKAVGGIINGLVTQGIEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA Q G+ V RNG Sbjct: 363 -DHLVHVSGHPRRDELREMISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVMICRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P +ID++ G KDG ++ + + +RR+++F G V + L + Sbjct: 422 LVRLGPGDPAVIDQLPSGRLYKDGTILEEDKSRAVVERRKMAFAGCAFVALALTETGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP + G + ++ V+ T+ LP+ RR+D + ES+ +RS+++ Sbjct: 482 DDPEVELVGIPENNTAGEPLEDIVFDAVVATIEGLPRARRRDPDAVAESVRRTVRSIVQM 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL TV + + Sbjct: 542 EWGKKPLCTVHVLTV 556 >gi|270291434|ref|ZP_06197656.1| metallo-beta-lactamase superfamily enzyme [Pediococcus acidilactici 7_4] gi|304385147|ref|ZP_07367493.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] gi|270280280|gb|EFA26116.1| metallo-beta-lactamase superfamily enzyme [Pediococcus acidilactici 7_4] gi|304329341|gb|EFL96561.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] Length = 558 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 278/557 (49%), Gaps = 10/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+ EIG N YG + I++D G+ FP+D+L G+D V PD F Sbjct: 6 IKNNETAVYAIGGLNEIGKNT----YGIQFQDEIIVVDAGIKFPEDELLGIDYVIPDYQF 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ ++ + A+ ITH HEDH G + L ++VP+YASP A L+ K + K Sbjct: 62 LVANQQKIKALVITHGHEDHIGGIPFLLQQINVPIYASPLAAALIRGKLEEHGLLKTTEI 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+T+ + + +P G IV TGD+K D + Sbjct: 122 HEINEDTVIKFPKTSVSFFRTTHSIPDTLGVAVHTPSGVIVETGDFKFDLTPTTHQPPNL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L LM DSTNA R+ SE+ + K+I I + +G ++ TF+S++SRI Sbjct: 182 QKMAKLGDEGVLLLMSDSTNAERDEFTKSERWVGKSIRKIFEEVQGRIIFATFASNISRI 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S++ + ++G + D+ ++ E P ++++++ T Sbjct: 242 QMAAEAALKHGRKIAVFGRSMEAALVNGRELGYLDIPDEALVNAEEIRHLPADKVLIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN +++ ++ N L E G RVI Sbjct: 302 GSQGEPMAALSRIANGTHRQISIEPGDTVVFSSNPIPGNTISVNNVINELEEAGARVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH ++ K M + ++P+ + IHGE L H ELA I + Sbjct: 362 KVN-NIHTSGHGGQDEQKLMLRLMKPKYFMPIHGEYRMLQLHTELAHDCDIPFENSFIMS 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D G DG IG ++ + R+ LS G + V ++ Sbjct: 421 NGDVLALTKDSARRCGHFNAGDVYVDGNGIGDIGNVVLRDRQLLSEEGLVVVVATINLKT 480 Query: 478 NIF-GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + G++ + + T+ + + + +I L+ Sbjct: 481 KMIESGPDLLSRGF-VYMRESGELINEGRRRMFATIRQAMRNPHANEASINRAIIDDLQK 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + P++ + Sbjct: 540 FLYDQTERHPVIIPMLI 556 >gi|254469697|ref|ZP_05083102.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062] gi|211961532|gb|EEA96727.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062] Length = 555 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 235/554 (42%), Positives = 355/554 (64%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 EELVFLPLGGVGEIGMN+ LYGYG R+W+++D GVSF ++PGVDLV PDI F+ Sbjct: 3 STEELVFLPLGGVGEIGMNLGLYGYGPEDDRRWLIVDFGVSFAGPEMPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +ER + I ITHAHEDHYGAL LW L +PVYA+PF LLEAK + + +IP Sbjct: 63 EEERSRIDGIVITHAHEDHYGALSYLWKRLELPVYATPFTARLLEAKLIGDGADYQIPVT 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GD+ G F IE V + HSIPE AL IR ++H+GDWK+D +G D Sbjct: 123 VVNQGDRFKAGIFDIELVTMTHSIPEPCALAIRIGGQLVLHSGDWKIDLTPGVGKAIDLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G+EG+ +CDSTNA+R+G SE +K+ + I+K A V VTTF+S+V+R+R Sbjct: 183 RLRELGDEGVDVFVCDSTNAVRDGVSPSEADVKEELTRIIKEAPNRVAVTTFASNVARMR 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ + A R+IV++G S++R V +A D+G + F +E++G PR++++ + TGS Sbjct: 243 AVAEAAMAAEREIVVIGRSMQRTVEIARDLGYLDGLAPFRDEETYGSLPRDKVVALCTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+A+A+++ + R + L+ D VIFSSR IPGNE A+ I N+L +QG++V+ + Sbjct: 303 QGEARAAMARIAGDQHRLIGLSAGDMVIFSSRTIPGNEKAVYGIINQLTQQGLQVVTDR- 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +L ++Y +RP+ ++ +HGEPLHL HK+ A +G+ V +R+G M Sbjct: 362 DALVHVSGHPRRGELDQVYNLVRPKKVLPVHGEPLHLQCHKDFAESKGVKDVKIIRDGDM 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P +++IDE G+ ++DG L+ + G+ +RR+LS+ G ++V+++LD + G Sbjct: 422 VRLHPGGLKVIDEAPAGILVRDGRLVAAPEETGVQERRKLSYGGCVTVSLILDGRGELLG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++V G+P DG + V V+ +P+ RR+D++L+RE+ A R + + Sbjct: 482 DIDVVLFGMPDETEDGTPFEDAVRDAVYGAVISIPKSRRRDVELVREAARRAGRYAVVEH 541 Query: 542 WGKKPLVTVFINKI 555 WGKKPL + ++ Sbjct: 542 WGKKPLCKALVQRV 555 >gi|192291655|ref|YP_001992260.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|192285404|gb|ACF01785.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 556 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 238/555 (42%), Positives = 361/555 (65%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +E F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PD+ F Sbjct: 3 RPDEFTFAPLGGVGEIGMNLSIYGLGTRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDVRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE+KNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L AK ER + KIP Sbjct: 63 LEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLGCPIYATKFSASLFAAKLAAERTTLKIPI 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +D+G FS+E + V HSIPE+ AL IR+ VG ++HTGDWK+D ++G TD+ Sbjct: 123 TEVPSGGTIDLGPFSVEFIPVAHSIPESHALAIRTSVGTVLHTGDWKIDPTPVVGPPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + ++ ++K+AKG V VTTF+S+V RI Sbjct: 183 ARLRQLGDEGVLALIGDSTNAVRDGRSPSEAEVAVSLAGLIKSAKGRVAVTTFASNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A+ GR++VL+G ++ RV VA + G + Q F E +G +P ++++ + TG Sbjct: 243 RAVADAAKAAGREVVLVGRAMDRVAQVARETGHLDGVQSFRGPEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA++++ + + L + D VIFSSR IPGNE A+G I N LV QG+ VI + Sbjct: 303 SQGEPRAALARIAKDDHPEITLNKGDCVIFSSRTIPGNEKAVGSIINGLVTQGIEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA Q G+ V RNG Sbjct: 363 -DHLVHVSGHPRRDELREMISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVMTCRNGN 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P +ID++ G KDG ++ + + +RR+++F G V + L + Sbjct: 422 LIRLGPGDPAVIDQLPSGRLYKDGTILEQDTSRAVVERRKMAFAGCAFVALALTETGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +G+P + G + ++ V++TV LP+ RR+D + ES+ +RS+++ Sbjct: 482 DDPEVDLVGMPENNTAGEPLEDIVFDAVVSTVEGLPRARRRDPDAVAESVRRTVRSIVQA 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL TV + + Sbjct: 542 EWGKKPLCTVHVLTV 556 >gi|257125130|ref|YP_003163244.1| beta-lactamase [Leptotrichia buccalis C-1013-b] gi|257049069|gb|ACV38253.1| beta-lactamase domain protein [Leptotrichia buccalis C-1013-b] Length = 557 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 152/560 (27%), Positives = 288/560 (51%), Gaps = 12/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G NM + Y + I++D G++FP+D+ G+D++ PD +++ Sbjct: 4 KEEKMYVIPLGGIEEVGKNMTAFQY----KDEIIVVDAGLTFPEDEHLGIDVIIPDFSYL 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIGLLEAKRVYERVSKKI 118 + + + +TH HEDH GA+ + L ++P+Y + L AK + Sbjct: 60 ESNKHKIKGLLLTHGHEDHIGAIPYFYQKLGSENIPMYGGRLTLALARAKFEKKDAKLPK 119 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + F++E + V HSI + A+ I++P I+H+GD+K+D + G+ Sbjct: 120 EKVISGRTILKVSKYFTVEFISVTHSIADCYAICIKTPAATILHSGDFKVDLTPVDGEGF 179 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L +G EG+ L+ DSTNA G SE+ + +++ D A+G +++ F+S V Sbjct: 180 DFGRLAQLGEEGVDLLLSDSTNAQIPGFTPSERTVGESLKDEFSKAEGRIILAAFASHVH 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++IA + GRKI + G S+ ++ + ++G +K + + + YP ++++++ Sbjct: 240 RLQQIVNIATKHGRKIAIDGRSMVKIFEICSNLGYLKIPKDIMIDIDKVETYPADRVLIL 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP +AL++++ G + + L E DTV+ S+ IPGNE A N+L+++ V+ Sbjct: 300 CTGTQGEPLAALSRIANGTHKYISLREGDTVVISATPIPGNEKAATKNINQLMKRDANVV 359 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 E +HVSGH + K M ++P+ + +HGE + HKELA+ G+ + Sbjct: 360 FEKGIG-IHVSGHGCQEEQKLMINLVKPKFFLPVHGEYAMIKKHKELAIAVGVPEKNILL 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG L L + +V G DGF IG + + R+ L+ G + +++ Sbjct: 419 SENGAKLELTKSNFRSVGKVPSGAVFIDGFGIGDIGNAVLKDRQNLADDGIVIISISQYR 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + E+V G Y+ D + + V + + K++ +++ + + + Sbjct: 479 NGKFNKQVELVTRGF-VYNKDAESLLSETKEIVKAELNSMENEGIKEIGKIKQKLRAKVG 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K ++P++ I ++ Sbjct: 538 EFLNKETDREPIILPIIMEV 557 >gi|39936000|ref|NP_948276.1| beta-lactamase-like protein [Rhodopseudomonas palustris CGA009] gi|39649854|emb|CAE28376.1| Beta-lactamase-like [Rhodopseudomonas palustris CGA009] Length = 556 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 237/555 (42%), Positives = 361/555 (65%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +E F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PD+ F Sbjct: 3 RPDEFTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDVRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE+KNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L AK ER + KIP Sbjct: 63 LEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLGCPIYATKFSASLFAAKLAAERTTLKIPI 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +D+G FS+E + V HSIPE+ AL IR+ VG ++HTGDWK+D ++G TD+ Sbjct: 123 TEVPSGGTIDLGPFSVEFIPVAHSIPESHALAIRTSVGTVLHTGDWKIDPTPVVGPPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + ++ ++K+AKG V VTTF+S+V RI Sbjct: 183 ARLRQLGDEGVLALIGDSTNAVRDGRSPSEAEVAVSLAGLIKSAKGRVAVTTFASNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A+ GR++VL+G ++ RV VA + G + Q F E +G +P ++++ + TG Sbjct: 243 RAVADAAKAAGREVVLVGRAMDRVAQVARETGHLDGVQSFRGPEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA++++ + + L + D VIFSSR IPGNE ++G I N LV QG+ VI + Sbjct: 303 SQGEPRAALARIAKDDHPEITLNKGDCVIFSSRTIPGNEKSVGSIINGLVTQGIDVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA Q G+ V RNG Sbjct: 363 -DHLVHVSGHPRRDELREMISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVMTCRNGN 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P +ID++ G KDG ++ + + +RR+++F G V + L + Sbjct: 422 LIRLGPGDPAVIDQLPSGRLYKDGTILEQDTSRAVVERRKMAFAGCAFVALALTETGELA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +G+P + G + ++ V++TV LP+ RR+D + ES+ +RS+++ Sbjct: 482 DDPEVDLVGMPENNTAGEPLEDIVFDAVVSTVEGLPRARRRDPDAVAESVRRTVRSIVQA 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL TV + + Sbjct: 542 EWGKKPLCTVHVLTV 556 >gi|302554709|ref|ZP_07307051.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302472327|gb|EFL35420.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 554 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 168/553 (30%), Positives = 288/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 12 LRVIALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + LEAK + + + + Sbjct: 68 DDIVAVVLTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLEAKLKEHGIRPRTVRV--R 125 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 126 EGDRRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHTGDFKMDQFPLDERITDLRAFA 185 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 186 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 245 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L +S + P ++ ++ TGSQG Sbjct: 246 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVSTKELEKLPDHKITLVCTGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DT++ +S IPGNE AI + N L G V+ + Sbjct: 306 EPMAALSRMANRDH-QIRIGKGDTILLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 364 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANADLAIRTGVDPERVVIAEDGVV 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 424 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLALAAEGVVTVVAIVDADTGALA 483 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 484 EPPDFLARGFVHDDATFEPVVP----VIEKTLATAAEEGVGDARQLEQLVARAVANWAFR 539 Query: 541 VWGKKPLVTVFIN 553 +KPL+ I Sbjct: 540 THRRKPLIIPVII 552 >gi|15672272|ref|NP_266446.1| hypothetical protein L89418 [Lactococcus lactis subsp. lactis Il1403] gi|281490831|ref|YP_003352811.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] gi|12723153|gb|AAK04388.1|AE006266_7 hypothetical protein L89418 [Lactococcus lactis subsp. lactis Il1403] gi|281374589|gb|ADA64109.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] gi|326405868|gb|ADZ62939.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis CV56] Length = 560 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 275/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I+ID G+ FP+DDL GVD V PD T+ Sbjct: 7 IKADEVAVYAIGGLGEIGKNTYGVEY----KDEIIIIDAGIKFPEDDLLGVDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + +FITH HEDH G + L ++P+YA P ++ L+ K + + Sbjct: 63 IVENIDRIKGLFITHGHEDHIGGIPFLLKQANIPIYAGPLSLALIRGKLEEHGLLRDAKL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A + S++ R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 123 YEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQGKIVATGDFKFDFTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L L+ DSTNA SEK + +I I + +G ++ +F+S++ R+ Sbjct: 182 HRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASIMKIFERIEGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +D A + GRKIV+ G S+++ + +++G IK F+ Y +L+++ T Sbjct: 242 QQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIKAPKGTFIEPNEVNQYASHELLIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R++ L DTV+FSS AIPGN + + N++ E GV VI Sbjct: 302 GSQGEPMAALSRIANGMHRHITLQMGDTVVFSSNAIPGNTHGVNQLINKIAEAGVEVIYG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE L H LA G+ Sbjct: 362 KMN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMLKIHAGLAQDTGVPKENCFIQE 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D D DG IG + + R +LS G + +D Sbjct: 421 NGDVLALTADSARYADHFPASDTYVDGSGIGDVGNAVLHDRHELSEDGIVLAVATVDFEK 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + G + + + + + + + + ++ AL Sbjct: 481 KTVLAGPDMLSRGF-IYMRESGDLIRSGQRVLFNAIREAMHEENANEASVARAMREALSP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + PLV I Sbjct: 540 FLYKQTERSPLVVPMIM 556 >gi|227509420|ref|ZP_03939469.1| metallo-beta-lactamase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512183|ref|ZP_03942232.1| metallo-beta-lactamase [Lactobacillus buchneri ATCC 11577] gi|227524087|ref|ZP_03954136.1| metallo-beta-lactamase [Lactobacillus hilgardii ATCC 8290] gi|227084577|gb|EEI19889.1| metallo-beta-lactamase [Lactobacillus buchneri ATCC 11577] gi|227088718|gb|EEI24030.1| metallo-beta-lactamase [Lactobacillus hilgardii ATCC 8290] gi|227191132|gb|EEI71199.1| metallo-beta-lactamase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 561 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 172/556 (30%), Positives = 271/556 (48%), Gaps = 10/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN E +GG+GEIG N YG + I+ID G+ FP+DDL GVD V PD ++ Sbjct: 7 KNNEAAIYGVGGLGEIGKNT----YGVQFQDEIILIDAGIKFPEDDLLGVDYVIPDYKYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + A+ ITH HEDH G + L L+VP+YA P A+ L++ K + + Sbjct: 63 VDNKDKIKALVITHGHEDHIGGVPYLMKVLNVPIYAGPLAMALIKNKLEEHGLLNSVELH 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + R HSIP+T+ + + +PVG IV TGD+K D + D Sbjct: 123 EISDKSVIKFRKTKVSFFRTTHSIPDTLGVAVHTPVGVIVETGDYKFDLTPVTNQPPDLQ 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+L LM DSTNA + SEK + +I I K ++ TF+S++SRI+ Sbjct: 183 EMAKLGAEGVLCLMSDSTNAEKPVWTKSEKWVGISISHIFDQVKDRIIFATFASNISRIK 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D A GRKI + G S+ + ++G + D F+ P + +++ TG Sbjct: 243 TACDNALARGRKIAVFGRSMDAAIVNGRELGYLDIPDDAFVDANQLQSLPANKTMILCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R + + DTVIFSS IPGN ++ + N+L E G VI Sbjct: 303 SQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTTSVNDVINKLEEAGANVIHGK 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + IHGE L H ELA Q G+ ++N Sbjct: 363 VN-NIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFIMQN 421 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G +L L D + G DG IG + + R+ LS G + V ++ H Sbjct: 422 GDVLALSKDTARLAGHFQAGDVYIDGSGIGDIGSIVLRDRQLLSEEGIVVVVATINLHNQ 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y + G++ + V T+ ++ +R ++ L+ Sbjct: 482 EIQSGPDILSRGF-VYMRESGELLDEGRRRVFKTIRKAMHNKKATEASIRNAVIDDLQEF 540 Query: 538 LKKVWGKKPLVTVFIN 553 L + P++ + Sbjct: 541 LYDKTERHPMILPMLI 556 >gi|269836974|ref|YP_003319202.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786237|gb|ACZ38380.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 555 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 182/562 (32%), Positives = 296/562 (52%), Gaps = 14/562 (2%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M N+ L LGG+GE+G NM + G I+ID GV FP++D+ GVDL+ PDIT Sbjct: 1 MNNDHHLDVTFLGGLGEVGKNMLVLASG----DDMIVIDAGVGFPEEDMFGVDLLLPDIT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--K 117 ++ + + IFITH HEDH GAL L ++ PVY++ GLL + ++ Sbjct: 57 YLRQNADRVRGIFITHGHEDHIGALAYLLEAVNAPVYSTRLTQGLLRNRLRERKMLDRAD 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + I + ++ G F++E RV+HSIP+ + I +PVG +VHTGD+K D + G + Sbjct: 117 LRLIVPEEDPRITAGCFTVECFRVSHSIPDAVGFAIETPVGLVVHTGDFKFDQTPVDGRL 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 TD L +G L L+ D + GT SE+ +++ D+M+ A G V+V TF+S++ Sbjct: 177 TDMAKLGELGRREPLLLISDCVHVESPGTTPSERVVEQTFDDVMRRASGRVIVATFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIV 296 SR++ ++ A + GR++ +G SL+ V VA+++G + + P EQ++ Sbjct: 237 SRVQQVLTTAHRHGRRVACVGRSLQNNVRVALELGYLTPPPDTLIRVAQAAKLPPEQVVY 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP + L++++RG+ + +++ DTV+ S+ IPGNE ++ + N+L +QG V Sbjct: 297 VCTGSQGEPMAVLSRIARGDHKEIRIQPGDTVVISATPIPGNESSVYRLINQLFKQGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VP 414 I A PVHVSGH ++L+ M +RP+ ++ HGEP HL + +LA GI + Sbjct: 357 IY-AAHAPVHVSGHASQDELRMMLNLVRPRFVLPFHGEPRHLYLYADLARSVGIPDERIM 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G + R + EI+ V G DG +G+ D I RR L+ G L + V +D Sbjct: 416 IGEVGTVFRFDGETAEIVGSVPSGTVYVDGLSVGEAGDKTIVDRRLLARDGVLLIVVTID 475 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEIV G DG G + + L R +I Sbjct: 476 RESGQVVAGPEIVGRGFLP-DGVGTAFLTAARDHLSQVLGQNGHTSHGRLAATR-AIHET 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 ++S + + ++P++ + ++ Sbjct: 534 VQSFVYQQTRRRPVILPVVLEV 555 >gi|125623174|ref|YP_001031657.1| putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|124491982|emb|CAL96909.1| Putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|300069921|gb|ADJ59321.1| putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris NZ9000] Length = 561 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 275/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG N Y + I+ID G+ FP+DDL GVD V PD T+ Sbjct: 7 IKADEVAVYAIGGLGEIGKNTYGVEY----KDEIIIIDAGIKFPEDDLLGVDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + +FITH HEDH G + L ++P+YA P ++ L+ K + + Sbjct: 63 IVENIDRIKGLFITHGHEDHIGGIPFLLKQANIPIYAGPLSLALIRGKLEEHGLLRDAKL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A + S++ R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 123 YEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQGKIVATGDFKFDFTPVG-EPADL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L L+ DSTNA SEK + +I I + +G ++ +F+S++ R+ Sbjct: 182 HRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASIMKIFERIEGRIIFASFASNIFRL 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +D A + GRKIV+ G S+++ + +++G IK F+ Y +L+++ T Sbjct: 242 QQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIKAPKGTFIEPNEVNQYASHELLIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R++ L DTV+FSS AIPGN + + N++ E GV VI Sbjct: 302 GSQGEPMAALSRIANGMHRHITLQMGDTVVFSSNAIPGNTHGVNQLINKIAEAGVEVIYG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE L H LA G+ Sbjct: 362 KMN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMLKIHAGLAQDTGVPKENCFIQE 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D D DG IG + + R +LS G + +D Sbjct: 421 NGDVLALTADSARYADHFPAADTYVDGSGIGDVGNAVLHDRHELSEDGIVLAVATVDFEK 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + G + + + + + + + + ++ AL Sbjct: 481 KTVLAGPDMLSRGF-IYMRESGDLIRSGQRVLFNAIREAMHEENANEASVARAMREALSP 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + PLV I Sbjct: 540 FLYKQTERSPLVVPMIM 556 >gi|163793203|ref|ZP_02187179.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium BAL199] gi|159181849|gb|EDP66361.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium BAL199] Length = 555 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 199/554 (35%), Positives = 308/554 (55%), Gaps = 5/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++++L FLPLGG EIGMN+ LYGY +W+M+D G++F D PG+D++ PDI I Sbjct: 7 RDDDLYFLPLGGSDEIGMNVNLYGYA----GRWLMVDLGITFADDSTPGLDIILPDIEPI 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R L + +TH HEDH GA+ LW L P++ +PF LL K + ++ Sbjct: 63 VKHRDRLEGLLLTHGHEDHIGAVPYLWPKLRCPIWCTPFTASLLRRKLDDAGLLGEVDLR 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G +G F +E VR HSIPE A+V+R G +VHTGDWK D +G+ TD D Sbjct: 123 EVPVGANFVIGPFEVELVRQTHSIPEPSAVVLRCGAGTVVHTGDWKFDPTPFVGEATDFD 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L A+G+EG+LAL+ DSTN G+ SE ++ + ++ G + VT+F+S+V+R+ Sbjct: 183 ALRAVGDEGVLALIGDSTNVFEPGSTGSEAEVRMALTELFDQYNGRIAVTSFASNVARME 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+ A R+ L+G SL R+ A + G + F+S+ G +P +++++I TGS Sbjct: 243 SVALAAAANDRQTALVGRSLWRMHDAAKENGYLAGLPPFVSEADAGFFPEDKIVLICTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+AL++++ G ++ L E D I+SSR IPGNE AIG ++N+L + V ++ + Sbjct: 303 QGEPRAALSRIADGTHPHITLGEGDVCIYSSRQIPGNERAIGRVQNKLAGRNVEILTTED 362 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 VHVSGHP +DL RMYQ IRP++ + +HG+ HL H LA + NG + Sbjct: 363 HPGVHVSGHPARDDLARMYQLIRPRIAIPVHGDARHLREHARLARACQVPEAVVPANGSL 422 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL +ID V G DG + A I RR + + G SV ++LD + Sbjct: 423 IRLRAGAAAVIDHVDTGGLTMDGGRLVPLASEAIQARRHMLYNGAASVTLVLDKVGKLRA 482 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G+ DG + V + L R+D + +RE+ +R +++ Sbjct: 483 EPLVSFQGV-TDGADGEDLELDAADAVREALRGLSVANRRDDEAVREAARRMVRRVVRAE 541 Query: 542 WGKKPLVTVFINKI 555 GK+P+ V + ++ Sbjct: 542 HGKRPVTDVHVVRV 555 >gi|171779196|ref|ZP_02920167.1| hypothetical protein STRINF_01044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282252|gb|EDT47679.1| hypothetical protein STRINF_01044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 560 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 278/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----KDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAKL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 122 YEINANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSEIKDYHASEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA+ G+ + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMLKIHAGLAVDTGVPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L + DG IG + RR LS G + +D Sbjct: 420 NGDVLALTANSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFDS 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGNLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|308176856|ref|YP_003916262.1| RNA-metabolising metallo-beta-lactamase [Arthrobacter arilaitensis Re117] gi|307744319|emb|CBT75291.1| putative RNA-metabolising metallo-beta-lactamase [Arthrobacter arilaitensis Re117] Length = 568 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 166/559 (29%), Positives = 293/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + +PLGG+GE+G NM ++ + K ++IDCGV FP++ PGVDL+ PD ++ Sbjct: 20 LKKGTMRIVPLGGLGEVGRNMTVFE----LNGKLLIIDCGVLFPEEHQPGVDLILPDFSY 75 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ + +TH HEDH GA+ L +P+Y S + +EAK R+ Sbjct: 76 IKDRLDDVVGVVLTHGHEDHIGAVPYLLRLREDIPLYGSKLTLAFVEAKLAEHRIKANSN 135 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G+ +G F E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 136 IVV--EGEVAQIGNFECEFVAVNHSIPDALAVFLRTEAGTVLHTGDFKMDQLPLDGRITD 193 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G ++E+ I + A+ ++V +FSS V R Sbjct: 194 LRHFARLGEEGVDLFLPDSTNAEVPGFTVAEREIGPVLEAKFSRARRRIIVASFSSHVHR 253 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GRK+ +G S+ R + +A +G ++ + + + P ++++++ Sbjct: 254 VQQVLDAAAVHGRKVAFIGRSMVRNMGIAERLGYLEVPQGVLVDLKQIDSLPDHKVVLMS 313 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ GE + V++ DTVI +S IPGNE ++ + N L+ G VI Sbjct: 314 TGSQGEPMAALSRMANGEHK-VQINPGDTVILASSLIPGNENSVFRVINGLMRLGAEVIH 372 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +RP+ ++ +HGE HL+A+ LA Q G+ V Sbjct: 373 KGM-AKVHVSGHASAGELLYCYNILRPKNVLPVHGETRHLIANGRLAAQSGVPEENVLLA 431 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L +++ +V G DG +G D + R L G +SV +++ Sbjct: 432 EDGSVIDLKDGVAKLVGQVECGYVYVDGSKVGTITDDDLKDRVTLGEEGFISVITVINRQ 491 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I P+I G+ D +I + ++ V + P L++ + Sbjct: 492 NGTIISGPDIHARGVAEEDSVFNEIKPKIAAAIVEAVSNNPN---HSTHQLQQITRRVIG 548 Query: 536 SLLKKVWGKKPLVTVFINK 554 S + + ++P++ + + Sbjct: 549 SWVSRKLRRRPMIVPVVLE 567 >gi|319649504|ref|ZP_08003660.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] gi|317398666|gb|EFV79348.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 159/557 (28%), Positives = 280/557 (50%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +NE + LGGVGE+G NM L +ID G+ FP++++ G+D+V PDIT++ Sbjct: 5 QNESIKLAALGGVGELGKNMYLAE----VDEDIYVIDAGLMFPENEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + IF+TH HEDH G L + + ++VPVY + + L +AK + K I Sbjct: 61 VQNKERVKGIFLTHGHEDHIGGLSYVLTKVNVPVYGTKLTLALAKAKMKEQEYRGKAKFI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + KV+ + + R HSIP+++ + I + G IV+TGD+K D A + Sbjct: 121 EINSDTKVEFDSADVTFFRTGHSIPDSVGVAIHTSEGAIVYTGDFKFDQAATALYKPEIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+L L+ DST A + G SE + + + AKG V+ +F+S + RI+ Sbjct: 181 KMARLGEEGVLCLLSDSTEAEKPGYTNSESKVAREMTAAFYAAKGRVIAASFASDLIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I D A + GRK+ ++G SL+++ +A+ +G ++ + + + Y +Q++V+ TG Sbjct: 241 HIFDAAMETGRKVAVVGRSLQKIFDIAMQLGYLQVGEDVIIPVAEISKYSDDQIVVLTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP AL ++++ R V + + DTV+ ++ + G EV I + L G VI Sbjct: 301 NQGEPIEALQKMAKQSHRQVNIKKDDTVLLAASPLRGTEVLIFKTIDMLFRAGAEVI--P 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + + S H +LK M + P+ + +HGE L AH ++A GI+ + Sbjct: 359 GKGTFNTSSHGSQEELKFMINLMSPKFFIPVHGEYRMLKAHAKIANDCGISSGQIFIPDK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + I ++ G L DG +G ++ + R+ LS G L V V L+ Sbjct: 419 GDVAEIKDGVIVPGGKIPSGNVLIDGIGVGDVGNIVLRDRKLLSQDGILLVVVTLNKKEK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + K+ + +K V V D +++ + +L Sbjct: 479 KISAGPEIITRGF-VYVRESEKLLEEAVKIVKEAVEQNLARESFDWSGIKQDMRDSLNQY 537 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ + + Sbjct: 538 LYEKTKRRPMILPILME 554 >gi|320547528|ref|ZP_08041814.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320447873|gb|EFW88630.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 560 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + + ITH HEDH G + L ++PVYA P A+ L++ K + + Sbjct: 62 IVDNIDRIKGLVITHGHEDHIGGIPFLLKQANIPVYAGPLALALIKGKLEEHGLLRDAKL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +V+ +P G IV TGD+K D + + D Sbjct: 122 YEINANTELTFKNLSVTFFRTTHSIPEPLGIVVHTPQGKIVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSEIKDYHASEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H L + GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMLKIHAGLGMDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L + DG IG + RR LS G + +D Sbjct: 420 NGDVLALTANSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFDS 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|229490895|ref|ZP_04384730.1| ribonuclease J [Rhodococcus erythropolis SK121] gi|229322285|gb|EEN88071.1| ribonuclease J [Rhodococcus erythropolis SK121] Length = 669 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 288/555 (51%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP+D PGVDL+ PD +I Sbjct: 125 LRIVALGGIGEIGRNMTVFEH----RGKLLIVDCGVLFPEDQQPGVDLILPDFRYIEDRM 180 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GAL L +PV + F + L+ AK R+ + + Sbjct: 181 DDVEAVILTHGHEDHIGALPFLLRLRADIPVIGAKFTLALVAAKCREHRLRPNLVEVV-- 238 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ G F E VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD Sbjct: 239 EGNTTTHGPFDCEYFAVNHSIPDALAIAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFS 298 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I + +++ AK V+V +F+S V RI+ ++ Sbjct: 299 RLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVV 358 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + R+IV +G S+ R + +A D+G + D L + ++ P ++L++I+TGSQG Sbjct: 359 DVAARYNRRIVFVGRSMVRNMQIAQDLGYLTVPDGLVVDIDTAATLPDDRLVLISTGSQG 418 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++RGE R + + D V+ +S IPGNE ++ + N L ++G V+ + + Sbjct: 419 EPLAALSRMARGEHRQINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQS-A 477 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP + +HGE HL A+ LA G+ + +G + Sbjct: 478 KVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVV 537 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + + EI+ V G DG +G + ++ R L G +++ ++++ Sbjct: 538 VDMVDGLAEIVGRVPVGHVYVDGLSVGDVGEPTLSDRLVLGEGGFIAITIVINESTGRAV 597 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ G D K V + + L D + +S+ + + Sbjct: 598 STPEVSGRGFS----DDPTALKAAADLVESDLARLASEGVIDAHRIAQSVRRVVGRWVAD 653 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 654 KYRRRPMIIPTVIAV 668 >gi|299135017|ref|ZP_07028208.1| RNA-metabolising metallo-beta-lactamase [Afipia sp. 1NLS2] gi|298589994|gb|EFI50198.1| RNA-metabolising metallo-beta-lactamase [Afipia sp. 1NLS2] Length = 556 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 235/553 (42%), Positives = 353/553 (63%), Gaps = 2/553 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIM 62 +EL F+PLGGVGEIGMN++LYG G R W+ +D GVSF ++ LPG+D+V PD FI Sbjct: 5 DELSFVPLGGVGEIGMNLSLYGLGKGRQRSWLAVDLGVSFGNEEHLPGIDVVMPDTRFIE 64 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 E+KNL+ + +THAHEDH+GA+ DLW L P++A+ F+ L EAK ER IP Sbjct: 65 SEKKNLVGLVLTHAHEDHFGAIIDLWPRLQCPIFATKFSAALFEAKCASERNPPNIPVTV 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++G +VD+G F++E V V HSIPE+ AL IR+ G ++HTGDWKLD ++G+ T++ Sbjct: 125 IESGGRVDIGPFNVEFVAVQHSIPESHALAIRTSEGLVLHTGDWKLDPTPLIGEPTNEKR 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L +G+EG+LAL+ DSTNA+REG SE+ + + +I+K+AKG V VTTF+S+VSR+R+ Sbjct: 185 LRELGDEGVLALIGDSTNAVREGRSPSEREVAHGLTEIIKDAKGRVAVTTFASNVSRMRA 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + + A + R++VL+G +++RV VA + G + F S + +G +P +++ + TGSQ Sbjct: 245 VAEAAREADREVVLIGRAMERVAQVARETGYLDGIAPFRSADLYGHFPPNKVLALCTGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+ALA+++ + V L DTVIFSSR IPGNE ++G I N LV QG++VI + Sbjct: 305 GEPRAALARIANDDHPEVTLNSGDTVIFSSRTIPGNEKSVGTIINGLVSQGIKVITDRTH 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L+ M W+RPQ+L+ HGE LHL H LA G+ V +NG + Sbjct: 365 M-VHVSGHPRRDELRDMISWVRPQLLIPAHGEALHLSEHASLARSCGVPKVLICKNGDQV 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P II++V G KDG ++ + RR+L+F G V + L + Sbjct: 424 RLAPGEPAIIEQVPSGRLYKDGKILEDQNARAVVARRRLAFAGSAFVALALTEQGELADD 483 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P++ +GIP + G + +L+ + T +LP+ +R+D + E++ A+RS + + W Sbjct: 484 PQVDLVGIPERNAAGELMDELIFDVAVATFDNLPRAKRRDSDAVGEAVRRAVRSAIAEQW 543 Query: 543 GKKPLVTVFINKI 555 GKK + V + ++ Sbjct: 544 GKKTVCVVHVLEV 556 >gi|325571581|ref|ZP_08147081.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325156057|gb|EGC68253.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 559 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V D ++ Sbjct: 5 LKNNETGVFGVGGLGEIGKNC----YGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + +TH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IVQNLPKVKGLIVTHGHEDHIGGIPYLLREANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + SI R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTSISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HKMAKIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIQKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVESHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN ++ + N L+E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQIQIHPDDTVIFSSSPIPGNTTSVNQLINLLLEAGANVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H +LA G+ + Sbjct: 360 KLN-NIHTSGHGGQEEQKLMLRLMKPKFFMPVHGEFRMLNIHTQLAQDVGVPKENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ML L D + DG IG ++ + RR LS G + +D Sbjct: 419 NGDMLALTADTARLAGHFNANDVYVDGSGIGDIGNVVLRDRRILSEEGLVLAVATVDVAK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + G++ + + + ++ LRE++SSAL+ Sbjct: 479 KEVLAGPDILSRGF-VYMRESGEMINEAQQILFRALREVLNQPDPTEHKLREAMSSALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEKTERHPMILSMIM 554 >gi|302537288|ref|ZP_07289630.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. C] gi|302446183|gb|EFL17999.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. C] Length = 561 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 285/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ + + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEF----DGRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 75 DDIEGIVLTHGHEDHIGAVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--K 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ ++G F E + VNHSIP+ +A+ IR+ G +V TGD+K+D + +TD + Sbjct: 133 EGERENLGPFDCEFIAVNHSIPDALAVAIRTDAGLVVATGDFKMDQLPLDNRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I I + A+ ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPERDISNAIRGVFAGAQKRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G ++ L + ++ P ++++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLIVDVKTLDDLPDDEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGAMTGVPKDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I +V G DG +G + + RR L G +SV V++D+ + Sbjct: 431 VDLIDGKARISGKVQAGYVYVDGLSVGDVTEASLKDRRILGDEGIISVYVVVDSTTGKVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G D G + + + + D + +++ I + + Sbjct: 491 TGPNIQARGSGIEDSAFGPVSAKIEEAIARAAAD----GVAEPHQIQQLIRRTMGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 SYRRRPMILPVVVEV 561 >gi|257865158|ref|ZP_05644811.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257871482|ref|ZP_05651135.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257874780|ref|ZP_05654433.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257799092|gb|EEV28144.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257805646|gb|EEV34468.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257808946|gb|EEV37766.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 559 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V D ++ Sbjct: 5 LKNNETGVFGVGGLGEIGKNC----YGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + +TH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IVQNLPKVKGLIVTHGHEDHIGGIPYLLREANIPIYAGPLALALITNKLDEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + SI R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTSISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I + G ++ +F+S++ R+ Sbjct: 180 HKMAKIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIQKIFEKIDGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVESHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN ++ + N L+E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQIQIHPDDTVIFSSSPIPGNTTSVNQLINLLLEAGANVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H +LA G+ + Sbjct: 360 KLN-NIHTSGHGGQEEQKLMLRLMKPKFFMPVHGEFRMLNIHTQLAQDVGVPKENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ML L D + DG IG ++ + RR LS G + +D Sbjct: 419 NGDMLALTADTARLAGHFNANDVYVDGSGIGDIGNVVLRDRRILSEEGLVLAVATVDVAK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + G++ + + + ++ LRE++SSAL+ Sbjct: 479 KEVLAGPDILSRGF-VYMRESGEMINEAQQILFRALREVLNQPDPTEHKLREAMSSALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEKTERHPMILSMIM 554 >gi|289705938|ref|ZP_06502314.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289557346|gb|EFD50661.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 561 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 161/559 (28%), Positives = 290/559 (51%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + LGG+ E+G NM + K +++DCGV FP++ PGVDL+ PD + Sbjct: 13 LKRGTCRIVQLGGLEEVGRNMVTFEI----DGKILIVDCGVLFPEEHQPGVDLILPDFDY 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ I +TH HEDH GA+ L +PV S + L+EAK R+ + Sbjct: 69 IRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEEHRIKPRTR 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V+ G F E V VNHSIP+ +A+ I + G I+HTGD+K+D + G +TD Sbjct: 129 VV--KEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPLDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA G +E I + AK ++V +FSS V R Sbjct: 187 LRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASFSSHVHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+ G S+ R +++A +G + + + + Y ++++++ Sbjct: 247 VQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDDEIVLMV 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ V+L E D V+ +S IPGNE ++ + N L++ G V+ Sbjct: 307 TGSQGEPMAALSRMANGDH-QVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLGATVVH 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P+ ++ +HGE HL+A+ +A + G+ V Sbjct: 366 KGM-AKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAENVILA 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + ++++ EV G DG +G+ +D + RR L G +S+ +++ Sbjct: 425 GNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFISIITVVNRQ 484 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G+ + +I +++ + V + L++ + + Sbjct: 485 TGTIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQS---SKDHTAHQLQQVVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + ++P++ + + Sbjct: 542 TWVNRKLRRRPMIIPVVLE 560 >gi|284030913|ref|YP_003380844.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283810206|gb|ADB32045.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 564 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 171/554 (30%), Positives = 283/554 (51%), Gaps = 16/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +PLGG+GE+G NM ++ Y K +++DCGV FP ++ PGVDL+ PD I + Sbjct: 20 RVIPLGGLGEVGRNMTVFEY----DGKLLVVDCGVLFPDENQPGVDLILPDFQPIRERLH 75 Query: 67 NLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++A+ +TH HEDH G L L +PV S + LLE K R + Sbjct: 76 DIVAVVLTHGHEDHIGGLPYLLRERGDIPVLGSRLTLALLEGKLREHRHRNVPQQVVV-E 134 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G+KV +G F E V VNHSIP+ +A+ IR+P G ++HTGD+K+D + +TD + Sbjct: 135 GEKVRLGPFECEFVAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLPLDDRITDLRAFAR 194 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-VLVTTFSSSVSRIRSII 244 +G EG+ DSTN+ G E+ I + + NA+ ++V F+S V R++ ++ Sbjct: 195 LGEEGVDLFCVDSTNSEVPGFTTHERDIAPVLDRVFTNARNQRIIVACFASHVHRVQQVM 254 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A + RK+ +G S+ R ++VA D+G + + + YP EQ+++++TGSQG Sbjct: 255 DAAVKHRRKVAYVGRSMVRNMAVARDLGFLTVPGETLIDMRELENYPPEQVVLVSTGSQG 314 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ + +V+L DTV+ +S IPGNE ++ + N L G VI + Sbjct: 315 EPMSALSRIAANDHNSVQLQPGDTVVLASSLIPGNENSVYRVINGLTRHGANVIHKG-NA 373 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ LA Q G+ V V +G + Sbjct: 374 LVHVSGHASAGELLYCYNIVKPRNVMPVHGEIRHLHANAALARQTGVPAENVVVVEDGVV 433 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L + +V G DG +G + + RR L G +SV ++D+ + Sbjct: 434 VDLVDRLAVVAGKVDCGYVFVDGSTVGDITETSLKDRRILGDEGFISVIAVMDSVTGKLT 493 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEI G D + + + + D+ L++ I + + Sbjct: 494 AGPEIQARGFAEDDTVFDDLRPKIEAEIEKAIGS----GVDDMYQLQQVIRRVVGKWVSD 549 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 550 THRRRPMIIPVVVE 563 >gi|239917244|ref|YP_002956802.1| beta-lactamase domain protein [Micrococcus luteus NCTC 2665] gi|281414281|ref|ZP_06246023.1| beta-lactamase domain protein [Micrococcus luteus NCTC 2665] gi|239838451|gb|ACS30248.1| beta-lactamase domain protein [Micrococcus luteus NCTC 2665] Length = 561 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 162/559 (28%), Positives = 291/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K + LGG+ E+G NM + K +++DCGV FP++ PGVDL+ PD + Sbjct: 13 LKRGTCRIVQLGGLEEVGRNMVTFEI----DGKILIVDCGVLFPEEHQPGVDLILPDFDY 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ I +TH HEDH GA+ L +PV S + L+EAK R+ + Sbjct: 69 IRDRLDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEEHRIKPRTR 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V+ G F E V VNHSIP+ +A+ I + G I+HTGD+K+D + G +TD Sbjct: 129 VV--KEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPLDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA G +E I + AK ++V +FSS V R Sbjct: 187 LRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASFSSHVHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+ G S+ R +++A +G +K + + + Y ++++++ Sbjct: 247 VQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLKVPNGILVDIRKVDKYRDDEIVLMV 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + V+L E D V+ +S IPGNE ++ + N L++ G V+ Sbjct: 307 TGSQGEPMAALSRMANADH-QVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLGATVVH 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P+ ++ +HGE HL+A+ +A + G+ V Sbjct: 366 KGM-AKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAENVILA 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + ++++ EV G DG +G+ +D + RR LS G +S+ +++ Sbjct: 425 GNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLSEEGFISIITVVNRQ 484 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G+ + +I +++ + V + L++ + + Sbjct: 485 TGAIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQS---SKDHTAHQLQQVVRRTVG 541 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + ++P++ + + Sbjct: 542 TWVNRKLRRRPMIIPVVLE 560 >gi|269118818|ref|YP_003306995.1| beta-lactamase [Sebaldella termitidis ATCC 33386] gi|268612696|gb|ACZ07064.1| beta-lactamase domain protein [Sebaldella termitidis ATCC 33386] Length = 591 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 161/560 (28%), Positives = 289/560 (51%), Gaps = 12/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G NM + Y + +++D G++FP+D+ G+D++ PD T++ Sbjct: 38 KEEKVYIIPLGGMEEVGKNMTAFQY----KDEIVIVDAGLTFPEDEHLGIDVIIPDFTYL 93 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIGLLEAKRVYERVSKKI 118 + + ++ +TH HEDH GA+ L+ L + +Y + L +AK + Sbjct: 94 ENNKDKIKSLLLTHGHEDHIGAIPYLFQKLGSTDITIYGGKLTLELAKAKFEKKDAVIPK 153 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + FS+E + V HSI + A+ I++P G IVH+GD+K+D + G+ Sbjct: 154 MKVVKGRTKLKLSKYFSVEFISVTHSIADCYAICIKTPAGIIVHSGDFKVDLTPVDGEGF 213 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L +G EG+ L+ DSTNA G SEK + +++ + AKG +++ F+S + Sbjct: 214 DFARLAQLGEEGVDLLLSDSTNAAIPGFTPSEKSVGESLREEFGKAKGRIIIAAFASHIH 273 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVI 297 R++ I+DIA+ RKI + G S+ +V +A +G +K + + P E+ I++ Sbjct: 274 RLQQIVDIAQIYNRKIAIDGRSMVKVFDIASRLGYLKFPKNMIVDLHKSDKLPPEKAIIL 333 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP +AL++++ G + + L E DTVI S+ IPGNE A+ N L+++ V+ Sbjct: 334 CTGTQGEPLAALSRIANGTHKYISLREGDTVIISATPIPGNEKAVYKNINHLLKKNANVV 393 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E +HVSGH + K M ++P+ + +HGE + L HKELA+ G+ V Sbjct: 394 FEKVVG-IHVSGHGCQEEQKIMLSLVKPKFFMPVHGEYMMLKKHKELAVATGVESDNVIL 452 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG + L + +V G+ L DGF IG ++ + R+ L+ G + + V Sbjct: 453 AENGNKIELTKSHCRVAGKVQSGMTLIDGFGIGDVGNIVLKDRQNLADDGIVIITVSQYK 512 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + E+V G Y+ + + + + + + K++ +++ + S + Sbjct: 513 NGKFNKQIELVTRGF-IYNRESENLILETKELIKLELESIETKEIKEISKVKQLLKSKVG 571 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K ++P++ I ++ Sbjct: 572 EFLYKKTNREPIILPIIMEV 591 >gi|254461956|ref|ZP_05075372.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2083] gi|206678545|gb|EDZ43032.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 555 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 197/557 (35%), Positives = 317/557 (56%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M E L++LPLGG GEIGMN +YGYG P K I++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSAERLIYLPLGGAGEIGMNAYVYGYGKPGKEKLILVDLGVTFPDMDGTPGVDLILPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R +L AIFITHAHEDH GA+ + L P+Y F + K V K Sbjct: 61 WLKERRNDLEAIFITHAHEDHVGAIGHFYEQLKAPIYTRAFTANIARRKLDEYGVEAKAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V G FS+ + ++HSIPE+ L I SP G ++HTGD+K+D ++G+ D Sbjct: 121 TTVSPWPEVVKAGPFSVGFLPISHSIPESSGLCIDSPDGRVLHTGDFKIDKTPLVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +G+ AL+CDSTN SE + I ++K+ G V+ TTF+S+V+R Sbjct: 181 EQLWRDVSKDGVKALVCDSTNVFSLNEGRSEITVGPEIEKLIKDQPGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR +VLLG +++R+V +I+ G++ ++ E PRE ++++ T Sbjct: 241 VKTLAEAGVRAGRSVVLLGRAMRRMVEASIETGVLSDFPTCINPEDATQLPRENVMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ + + L E DT +FSS+ IPGNE + +I N+L E+GV VI + Sbjct: 301 GSQGERRAASAQLARGKYQGLTLKEGDTFLFSSKTIPGNERGVIYIINQLSEKGVDVI-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL++M++ +PQ+L+ +HGE HL H ++A +G+ V NG Sbjct: 360 DSSGLYHVSGHANRPDLEKMHEITKPQMLIPMHGEHRHLRTHVKIAEAKGLKGV-VAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + ++ D + G DG + D + R +++ GH++V V++D + + Sbjct: 419 MMIDLSGNAPKVADYIETGRTYLDGSVQVGALDGVVRDRMRMAMNGHITVTVIIDENDEM 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+ + ++ + + + +D K L E+I +R Sbjct: 479 LGDPWCELMGLADQGKSRAPLVDVVEEDLSQLIGRSNGKTMRDDKKLEEAIKRQVRQSCN 538 Query: 540 KVWGKKPLVTVFINKIS 556 GK P VT+ +++++ Sbjct: 539 AEIGKNPEVTIVVSRLA 555 >gi|75676063|ref|YP_318484.1| metallo-beta-lactamase superfamily hydrolase [Nitrobacter winogradskyi Nb-255] gi|74420933|gb|ABA05132.1| hydrolase of the metallo-beta-lactamase superfamily [Nitrobacter winogradskyi Nb-255] Length = 557 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 238/553 (43%), Positives = 353/553 (63%), Gaps = 2/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL+F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PDI F Sbjct: 4 RPDELMFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +ERKNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER IP Sbjct: 64 LEQERKNLVGLVLTHAHEDHFGAIIDLWPRLKCPIYATKFSAALFEAKCAAERNPPDIPV 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G +++VG F +E + V HSIPE+ AL I + G +VHTGDWK+D I+G TD+ Sbjct: 124 TVVPSGGRIEVGPFGVEFIPVAHSIPESHALAIHTAAGIVVHTGDWKIDPTPIIGPPTDE 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + + I D++K AKG V VTTF+S+V R+ Sbjct: 184 RRLRELGDEGVLALIGDSTNAVRDGRSPSEAEVARTIADLVKAAKGRVAVTTFASNVGRL 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A + GR++V++G ++ RVV VA + G + Q F S + +G P ++++ + TG Sbjct: 244 RAVADAAREAGREVVVVGRAMARVVQVARETGHLNGMQDFRSADVYGHLPHDKVLALCTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++R + V L DTVIFSSR IPGNE A+G I N LV QG+ VI + Sbjct: 304 SQGEPRAALARIARDDHPEVTLNRGDTVIFSSRTIPGNEKAVGAIINGLVAQGIEVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP ++L+ M W+RP +L+ +HGE LHL H LA G+ V +NG Sbjct: 364 TQ-LVHVSGHPRCDELRDMISWVRPGLLIPVHGEALHLSEHARLARASGVPKVLICKNGD 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P IIDE+ G KDG ++ + +RR+++F G + V + + + Sbjct: 423 LVRLGPGEPGIIDELPSGRLYKDGAILEDSKSRAVVERRRMAFAGCVFVAIAVTAKGELI 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ +GIP + G + ++ TV++T + R+D + ES+ A+R+ + + Sbjct: 483 EDPEVDLVGIPEKNMAGEVLDDIVFDTVVSTAKGFSRTLRRDPDAMAESLRRAVRAAVAE 542 Query: 541 VWGKKPLVTVFIN 553 WGKKPL V + Sbjct: 543 QWGKKPLCYVHVL 555 >gi|170748462|ref|YP_001754722.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654984|gb|ACB24039.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 557 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 241/554 (43%), Positives = 357/554 (64%), Gaps = 2/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD-LPGVDLVFPDITFI 61 EELVFLPLGGVGEIGMN ALYG+G RKWIM+DCG+ F ++ +PGVDL+FPD++FI Sbjct: 5 QEELVFLPLGGVGEIGMNAALYGFGPEKGRKWIMVDCGMGFAGEEQMPGVDLMFPDLSFI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + RK+L+ IFITHAHEDH GA+ +LW L PVYA+ FA LLE +R+ E + K+ Sbjct: 65 EERRKDLLGIFITHAHEDHIGAISELWPRLKAPVYATRFAKNLLETRRLSEPGAPKVELR 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G +V VG F +E V V+HSIPE+ A+ IR+ G ++HTGDWK+D + G VT + Sbjct: 125 EVKPGRRVTVGPFELEYVPVSHSIPESNAIAIRTAAGLVLHTGDWKIDPTPVAGSVTSPE 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + A+G+EG+LA++CDSTN +REG SEK + + + ++ +A V VTTF+S+V+RIR Sbjct: 185 AFTALGDEGVLAIVCDSTNVVREGFSPSEKTVAETLKTLIADAPHRVAVTTFASNVARIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ + A GR+++ +G ++ RV+ VA + G + F +S+ PRE+++ + TGS Sbjct: 245 AVAEAAAACGREVIAVGRAMDRVIDVARECGYLDGLPEFRRSDSWKSLPRERVVALLTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA++SR + ++ L D VIFSSRAIPGNE +G I N L+EQGV VI + Sbjct: 305 QGEPRAALARVSRRDHPDISLTAGDQVIFSSRAIPGNERDVGSIINDLIEQGVEVITDRT 364 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +++ MY+W RP + +HGE LHL H A +G+ V RNG + Sbjct: 365 D-LVHVSGHPRRDEMVEMYRWTRPGTAIPVHGEALHLDEHARFARAQGVQNVVKARNGSL 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P E+ID V G KDG ++ D I +RR+L G +SV + +D + G Sbjct: 424 IRLSPGKPEVIDHVKAGRLFKDGDVLIDEKDRAIPERRKLMQAGLVSVAIAIDEDGVVLG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + IG+P G + + ++ V T+ + + + KD + + +++ A+R+ + +V Sbjct: 484 EPAVDIIGLPNRGRSGEPLIETVVDAVSRTLSGMSRGKLKDSESVEKTVDRAVRTAVNEV 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP V + ++ Sbjct: 544 WGKKPACHVQVVEV 557 >gi|255261863|ref|ZP_05341205.1| ribonuclease J 1 [Thalassiobium sp. R2A62] gi|255104198|gb|EET46872.1| ribonuclease J 1 [Thalassiobium sp. R2A62] Length = 554 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 190/557 (34%), Positives = 305/557 (54%), Gaps = 4/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L+++PLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PD++ Sbjct: 1 MSSERLIYVPLGGAGEIGMNCYVYGYGKPDQERLIVVDLGVTFPDMDSTPGVDLILPDVS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + A+FITHAHEDH GA+ + L P+YA PF + K + Sbjct: 61 WLEARKDRIEAVFITHAHEDHVGAVGHFYQRLGAPIYARPFTAAIARRKLDEHAAPESAL 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I D+VD G F + V ++HSIPE+ L I SP G I+HTGD+K+D+ +LG+ D Sbjct: 121 RIVGSYPDQVDAGPFKVYFVPISHSIPESAGLAIDSPEGRILHTGDFKIDETPVLGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++ + G+ AL+CDSTN SE + I +M++ G V+ TTF+S+V+R Sbjct: 181 RNLWADVAKGGVRALVCDSTNVFSADPGRSEATVGPEIEKMMRDQPGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + A++ GR + LLG +++R+V A + G++ +S E PR+ L+++ T Sbjct: 241 LKTLAEAADRAGRSVCLLGRAMRRMVEAATETGLLTDFPQTVSPEEAQSIPRQNLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ + L E DT +FSS+ IPGNE + I N L E GV VI + Sbjct: 301 GSQGERRAASAQLSRGKYLGLMLKEGDTFLFSSKIIPGNERGVISIMNALSEMGVDVIDD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + H SGH DL+ M++ +PQ+L+ +HGE HL H ++ G+A + NG Sbjct: 361 --DSRYHTSGHANRPDLEEMHRITQPQILIPMHGEHRHLRRHAQIGSDNGMASI-VAVNG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + + + + G DG D + R +++ G + V V++D H + Sbjct: 418 MMIDLSGNAPTVAEYIETGRTYLDGTAKVGQFDGIVRDRIRMALNGQVVVTVIMDEHGDP 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G G+ + +++ + + + + L E++ +R+ Sbjct: 478 LGGAWCELRGLTETGSSNAPLVEVIEEDLNQFLGRADNKTLANDDKLEEALRRVVRNTTN 537 Query: 540 KVWGKKPLVTVFINKIS 556 GKK V V I++++ Sbjct: 538 GEIGKKAEVVVVISRLA 554 >gi|312195005|ref|YP_004015066.1| RNA-metabolising metallo-beta-lactamase [Frankia sp. EuI1c] gi|311226341|gb|ADP79196.1| RNA-metabolising metallo-beta-lactamase [Frankia sp. EuI1c] Length = 561 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 165/557 (29%), Positives = 280/557 (50%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E L + LGG+GEIG NM ++ + + +++DCGV FP+ D PGVDL+ PD T I Sbjct: 17 EGLRIIALGGLGEIGRNMTVFEHA----GRLLIVDCGVLFPETDQPGVDLILPDFTAIRD 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ A+ +THAHEDH GA+ L +P+ + + L+ AK R+ I+ Sbjct: 73 RLDDIEAVILTHAHEDHIGAVPYLLRERADIPLVGTRLTLALMVAKLQEHRIKPVTLQIT 132 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ G F +E VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 133 --EEERHSFGPFDLEFFAVNHSIPDAVAVAIRTAAGLVLHTGDFKMDQLPLDGRLTDLGG 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ LM DSTNA G SE+ I + + + A ++V F+S V R++ Sbjct: 191 FARLGAEGVDLLMSDSTNAEVPGFVTSEREIAPVLDGVFREAGKRIIVACFASHVHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D AE GR + +G S+ R + VA D+G+++ L + P + +I+TGS Sbjct: 251 VLDAAEAHGRSVAFIGRSMVRNMGVARDLGLLRVPPGLIIDARDVESLPDRNICLISTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL++++ + +++ DTV+ +S IPGNE ++ + N L G +V+ + Sbjct: 311 QGEPLSALSRMANRDHA-IRIEAGDTVVLASSLIPGNEESVFRVINGLTRWGAKVVHKGV 369 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 VH SGH +L + RP ++ +HGE HL AH LA G+ + +G Sbjct: 370 -AKVHTSGHAPAGELLYVLNATRPSNMMPVHGEWRHLRAHGVLAELTGLPPERIVLAEDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ L I V G DG +G + + RR L G +++ ++D Sbjct: 429 MVVDLVEGQATITGAVPCGYVYVDGLAVGDVRESSLKDRRILGEEGFITITAVVDAAAGK 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + PE++ G D + K V + D + D+ L++ + + + Sbjct: 489 VVAGPELLARGFS----DDKVAFDKVRKLVNDGLADGMRSGMTDVNALQQLVRRIVGRWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 545 SDNYRRRPMIIPVVVEV 561 >gi|254382122|ref|ZP_04997484.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces sp. Mg1] gi|194341029|gb|EDX21995.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces sp. Mg1] Length = 561 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 165/555 (29%), Positives = 284/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ + + +++DCGV FP+++ PG+DL+ PD T I Sbjct: 19 LRVTPLGGLGEIGRNMTVFEF----DGRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ I +TH HEDH GA+ L +P+ S + L+EAK R+ + + Sbjct: 75 DDIEGIVLTHGHEDHIGAVPYLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEV--K 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ ++G F E + VNHSIP+ +A+ IR+ G +V TGD+K+D + +TD + Sbjct: 133 EGERENLGPFDCEFIAVNHSIPDALAVAIRTGAGLVVATGDFKMDQLPLDKRLTDLHAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + EGI L+ DSTNA G E+ I + + NA ++V +F+S V RI+ I+ Sbjct: 193 RLSEEGIDLLLSDSTNAEVPGFVPPEREISNVLRTVFANAHNRIIVASFASHVHRIQQIL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ +G S+ R + +A D+G +K L + ++ P +++++ TGSQG Sbjct: 253 DAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKTLDDLPAHEVVLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ DTVI +S IPGNE A+ + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIVPGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +P+ L+ +HGE HL A+ EL G+ + +G + Sbjct: 371 KVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGVPKDRIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I +V G DG +G + + RR L G +SV V++D+ + Sbjct: 431 VDLIDGKARISGKVQAGYVYVDGLSVGDVTEASLKDRRILGDEGIISVYVVVDSTTGKVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G D G + + + + D + +++ I + + Sbjct: 491 SGPNIQARGSGIEDSSFGPVIAKIEEAIARAAAD----GVAEPHQIQQLIRRTMGKWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 SYRRRPMILPVVVEV 561 >gi|68536205|ref|YP_250910.1| hypothetical protein jk1128 [Corynebacterium jeikeium K411] gi|68263804|emb|CAI37292.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length = 698 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 173/556 (31%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGG+ EIG NM ++ Y + ++IDCGV FP PGVDL+ PD +++ Sbjct: 134 KGSLRIVALGGISEIGRNMTVFEY----EGRLLIIDCGVLFPSSGEPGVDLILPDFSYLE 189 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ ITH HEDH GA+ L +P+ AS F L+ AK R K+ I Sbjct: 190 DKWDRVEALVITHGHEDHIGAIPWLLKQRADIPIIASRFTCALISAKTQEHRQRPKL--I 247 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G F + VNHSIP+ + + +++ G +VHTGD KLD + G TD Sbjct: 248 EVDENSHESRGPFDLRFFAVNHSIPDCLGIALKTGAGLLVHTGDIKLDQTPLDGRPTDLP 307 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ +CDSTNA G SE I + ++++AK V++ +F+S+VSR++ Sbjct: 308 ALSRFGDEGVDLFLCDSTNATTPGVSGSEAEIAPTLKRLVRDAKQRVIIASFASNVSRVQ 367 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 S +D A RK+ G S+ R + +A +G + +S + ++++I TG Sbjct: 368 SAVDAAVAANRKVAFNGRSMIRNMEIAERMGYLNVPRGTIVSMDEASKMAPHKVVLITTG 427 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G VI Sbjct: 428 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLSQIGATVITGR 487 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +P +N Sbjct: 488 -DAKVHTSGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVNPNNIPLAQN 546 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L +++ ++ G DG +G + R +S G +S+ ++DN Sbjct: 547 GVVVDLHNGHAKVVGQITVGNLYVDGTRMGDIDSGVLEDRTTMSEGGLISITTVIDNRTG 606 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 VP + G D + K + + V ++DL D + ++I + L Sbjct: 607 RPLEVPSVQAKGFS---DDARDMLKEIQEKVDNIMIDLAGEGENDPYRMAQAIRRKVGKL 663 Query: 538 LKKVWGKKPLVTVFIN 553 + W +KP++ + Sbjct: 664 ISDKWNRKPMIVPTVV 679 >gi|300023438|ref|YP_003756049.1| RNA-metabolising metallo-beta-lactamase [Hyphomicrobium denitrificans ATCC 51888] gi|299525259|gb|ADJ23728.1| RNA-metabolising metallo-beta-lactamase [Hyphomicrobium denitrificans ATCC 51888] Length = 571 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 226/557 (40%), Positives = 350/557 (62%), Gaps = 1/557 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ELVF+ LGG+GEIGMN LYGYG P++R W+M+D GV+FP + PG D+V PD+ +I Sbjct: 15 KSDELVFMALGGLGEIGMNTYLYGYGPPNARSWLMVDLGVTFPHESEPGADVVLPDLRYI 74 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + +RKNL+ + +THAHEDH GA+ DLW L P++A+PF G+++ K S +P Sbjct: 75 VADRKNLVGLVLTHAHEDHIGAVLDLWPSLECPIFATPFTAGMVKTKVGEAGRSAALPIR 134 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G + G F IE V + HSIPE + IR+P G + HTGDWK D ++G D + Sbjct: 135 TVPLGGRFKAGVFDIEFVGLTHSIPEPNGIAIRTPAGLVFHTGDWKFDPTPVVGKPHDPE 194 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L ++G+EG+LAL+ DSTNAMR+G SE + + I+ +A CV VT F+S+V+R+ Sbjct: 195 KLKSLGDEGVLALVGDSTNAMRDGRSASEADVAHTLMKIIADAPRCVAVTLFASNVARVA 254 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI + A + GR +V+ G +L R++ VA + G + + +L + F PR + +V+ TGS Sbjct: 255 SIAEAARKSGRTLVVAGRALHRIIEVAKETGYLPESFTYLDQQRFSDLPRNKTLVLCTGS 314 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+A+A+++ ++ L + D VIFSSR IPGNE A+ ++N L GV +I + Sbjct: 315 QGESRAAVARIAEEAHPDISLDKGDLVIFSSRTIPGNEKAVSKVQNALARIGVDLITD-T 373 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHV+GHP +LK MY W+RP++ V +HGE HL H +LA G++ + +G++ Sbjct: 374 DALVHVTGHPRREELKDMYAWLRPKLAVPMHGEARHLREHAKLARACGVSETFTIVDGEI 433 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 L+L+P +IDE G +DG LI + + RR+LSFVG V+++L ++ G Sbjct: 434 LKLWPGQAGVIDEAPVGRLYRDGNLIVPDVEGPVKARRKLSFVGIAVVSLVLSRRGDVLG 493 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P +V GIPA D DG + +++ + T +P RR DL +++E++ A+R+ + + Sbjct: 494 EPGLVLEGIPAADADGDSMREVVFDAIDGTFRSIPPKRRSDLSMVQEAVQKAVRAAINEA 553 Query: 542 WGKKPLVTVFINKISRQ 558 WGKKP+V V ++ + + Sbjct: 554 WGKKPVVKVLLSVVEAR 570 >gi|312865669|ref|ZP_07725893.1| ribonuclease J 1 [Streptococcus downei F0415] gi|311098790|gb|EFQ57010.1| ribonuclease J 1 [Streptococcus downei F0415] Length = 563 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 277/562 (49%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 62 IVENVDRIKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G IV TGD+K D + D Sbjct: 122 YEINDNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-QPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G++G+L L+ DSTNA SEK + ++I I+ G ++ +F+S++ R+ Sbjct: 181 HRMAALGDDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIGGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK D F+ Y +++++ T Sbjct: 241 QQAAEAAVKNGRKIVVFGRSMEKAIVNGIELGYIKVPDGTFIDPNELKDYHASEIMIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRMIKPKFFMPVHGEYRMQKVHAGLAEDTGIPRDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + RR LS G + +D Sbjct: 420 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFKT 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-VYMRESGDLIRQGQRILFNAIRIALKNKEASIQSINGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I ++ Sbjct: 539 FLYEQTEREPIIIPMILTPDKE 560 >gi|160947664|ref|ZP_02094831.1| hypothetical protein PEPMIC_01599 [Parvimonas micra ATCC 33270] gi|158446798|gb|EDP23793.1| hypothetical protein PEPMIC_01599 [Parvimonas micra ATCC 33270] Length = 557 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 194/559 (34%), Positives = 307/559 (54%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L +PLGGVGEIG NM++ Y + I++DCG++FP DD+PG+D+V PDIT++ Sbjct: 6 KKKTLKMIPLGGVGEIGKNMSILEY----DDEIIILDCGMTFPDDDMPGIDIVIPDITYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 MK + A+F+TH HEDH GA+ + ++VPVY + +GL+E+K +SK+ + Sbjct: 62 MKNIDRVKALFLTHGHEDHIGAVPYILKKINVPVYGTKLTLGLVESKLQEHNISKENLHL 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+ V FS+E +R HSIP++++ I++PVGNI+ TGD+K+D I GD D Sbjct: 122 VNA-GETVKTKHFSVEYIRACHSIPDSVSFGIKTPVGNIIFTGDFKIDYTPIDGDKMDLH 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G +G++ L DSTN R G +SE + ++ A G ++V TF+S++ R++ Sbjct: 181 RIAQWGMDGVMLLCADSTNVERPGYTLSESSVGDTFIELFSKAYGRIIVATFASNLHRVQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II AE+ RK+ + G S+ V+ VA ++ ++ K + + Y +++++ TG Sbjct: 241 QIIKAAEKFKRKVAVSGRSMVNVIKVATELNKLEIKKGTLIDLKDINKYDESEIVLLMTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +++ GE R + L E DTVI S+ IPGNE + NRLVE GV+VI Sbjct: 301 SQGEPMSALNRMAYGEHRKLVLTENDTVIISASPIPGNEKIFFGLVNRLVEMGVKVIHSS 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +LK ++ ++P+ + +HGE HL H +LA++ G+ + RN Sbjct: 361 L-ADVHVSGHACQEELKLIHTLVKPKYFIPVHGESRHLKRHAKLAVEMGMPEENIFIGRN 419 Query: 419 GKMLRL-FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G + + I V G L DG +G + R+ LS G + V V+L+ Sbjct: 420 GTVFEFNYKQEGFISGTVESGNILVDGLGVGDVGSAVLRDRKHLSEDGIIIVMVVLEKST 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I PEIV G Y + + + K V T+ + D+ +R +I L S Sbjct: 480 KEIISGPEIVSRGF-IYVKENLDLVSEMRKVVENTLNICKEDSITDIGTMRYNIRKDLNS 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + P++ I ++ Sbjct: 539 YIYHEIKRGPMIIPIITEL 557 >gi|288906174|ref|YP_003431396.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|306832215|ref|ZP_07465369.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979142|ref|YP_004288858.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732900|emb|CBI14479.1| putative metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|304425654|gb|EFM28772.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179070|emb|CBZ49114.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 560 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 165/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----KDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAKL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 122 YEINANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKDYHASEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA+ G+ + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMLKIHAGLAMDTGVPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L + DG IG + R LS G + +D Sbjct: 420 NGDVLALTANSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|319949590|ref|ZP_08023634.1| hypothetical protein ES5_09043 [Dietzia cinnamea P4] gi|319436741|gb|EFV91817.1| hypothetical protein ES5_09043 [Dietzia cinnamea P4] Length = 744 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 177/557 (31%), Positives = 288/557 (51%), Gaps = 16/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L + LGG+ EIG NM ++ Y K +++DCGV FP PGVDL+ PD I Sbjct: 192 RKGALRIVALGGISEIGRNMTVFEY----DSKLLIVDCGVLFPSSTEPGVDLILPDFGHI 247 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +THAHEDH GA+ L +PV S F + L+ AK R+ K Sbjct: 248 EDRLDQVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAAKCQEHRI--KPVF 305 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + D+G F + VNHSIPE + +VI++ ++ +GD KLD TD Sbjct: 306 RTVDESSVSDLGKFQVRYFDVNHSIPECLGVVIKAGDNTVMMSGDIKLDQLPTDKRPTDL 365 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G+EG+ L+ DSTNA G SE G++ + ++ +A+ V+V F+S+V R+ Sbjct: 366 PKMSRFGDEGVDLLLLDSTNATTPGISPSESGVRPALQRLIADARQLVVVACFASNVYRV 425 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIAT 299 +S++D A GRK+ L G S+ R + +A+++G++ L D P E+++V+ T Sbjct: 426 QSVVDAAAATGRKVALTGRSMLRNMEIALEMGLLTDPDRVLVDMDTAAKLPSEKVLVMTT 485 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGE + L++++R E R + L+E DTV+FSS +PGNE ++ ++N L + GV V+ Sbjct: 486 GTQGEAMAGLSRMARREHRQINLSEGDTVLFSSSIVPGNEESVFGVQNGLSQMGVNVVTS 545 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 E +HVSGH Y +L +Y +RP+ + +HGE HL A+K LA+ G+ V + Sbjct: 546 R-EADIHVSGHGYSGELLFIYNAVRPKNAMPVHGEWRHLRANKALAIATGVAEENVVLAQ 604 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ++ L ++ +V G DG G D +A R LS G + V++D Sbjct: 605 NGVVVDLVDGKASVVGQVPVGNLYVDGLSTGDIGDTVLADRTALSEDGFIVATVVVDPRT 664 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 P+I+ G D +++ V + DL D + +++ A+ Sbjct: 665 GRPVSKPQIIGKGF----TDEPGALAPVVELVENALWDLAGEGETDPYRIAQAVRRAVGR 720 Query: 537 LLKKVWGKKPLVTVFIN 553 + + W +KP++ + Sbjct: 721 WVSEKWRRKPMIVPTVI 737 >gi|221309557|ref|ZP_03591404.1| YmfA [Bacillus subtilis subsp. subtilis str. 168] gi|221313881|ref|ZP_03595686.1| YmfA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318804|ref|ZP_03600098.1| YmfA [Bacillus subtilis subsp. subtilis str. JH642] gi|221323076|ref|ZP_03604370.1| YmfA [Bacillus subtilis subsp. subtilis str. SMY] gi|255767378|ref|NP_389560.2| ribonuclease J2 [Bacillus subtilis subsp. subtilis str. 168] gi|321315445|ref|YP_004207732.1| ribonuclease J2 [Bacillus subtilis BSn5] gi|239938854|sp|O31760|RNJ2_BACSU RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|225185005|emb|CAB13551.2| ribonuclease J2 [Bacillus subtilis subsp. subtilis str. 168] gi|291484233|dbj|BAI85308.1| hypothetical protein BSNT_02722 [Bacillus subtilis subsp. natto BEST195] gi|320021719|gb|ADV96705.1| ribonuclease J2 [Bacillus subtilis BSn5] Length = 555 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 293/562 (52%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 57 ISYLIERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + + R HSIP+++ + ++ +G+IV TGD+K D L Sbjct: 117 TDLREIHSKSVITFESTKVSFFRTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPALNQT 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA R G SE + I D + N++ V++ F+S++ Sbjct: 177 CDIGEIAKIGNSGVLALLSDSANAERPGYTPSEAAVSGEISDALYNSQNRVIIAVFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI+ +I A Q GRKI + G +L+ V+ +A +G I+ D+LF+S + YP+ ++ + Sbjct: 237 NRIQQVIHAAAQNGRKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I GSQGEP +AL +++ + + + E DTV+ +S IPG E+ + L G +V Sbjct: 297 ITAGSQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLARAGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH ++A + + + Sbjct: 357 IF--AQKRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHSKIAEETGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIEKGDVVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEI+ G Y + + + V + V + + + L++++ A Sbjct: 475 KQKKHLVSGPEIITRGF-VYVRESEGLIVQATELVRSIVTEATETSNVEWSTLKQAMRDA 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|257462833|ref|ZP_05627239.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|317060460|ref|ZP_07924945.1| Zn-dependent hydrolase [Fusobacterium sp. D12] gi|313686136|gb|EFS22971.1| Zn-dependent hydrolase [Fusobacterium sp. D12] Length = 580 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 292/562 (51%), Gaps = 14/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +++ +PLGG+ E+G NM + Y + I++D G FP + LPGVDLV PD TF+ Sbjct: 25 KEDKMFVIPLGGLEEVGKNMTVLQY----KDEIIVVDVGAIFPDESLPGVDLVIPDFTFL 80 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-I 118 ++ + +FITHAHEDH GA+ L+ + +P+Y + +++K +SKK Sbjct: 81 ENNKEKIKGVFITHAHEDHIGAIPYLYEKIGKDIPIYGGKLTMAFVKSKFDNVGLSKKLP 140 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 KV VG FS+E V+V HSI ++ ++ I+SP G++ HTGD+K+D + GD Sbjct: 141 KMKVVTGRTKVKVGKYFSVEFVKVTHSITDSYSVSIKSPAGHVFHTGDFKIDLTPVDGDG 200 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L +G+EG+ L+ DSTN+ EG SEK + + AKG +++ F+S + Sbjct: 201 VDFARLAELGDEGVDLLLSDSTNSEVEGFTPSEKSVGEAFKQEFMRAKGRIIIAVFASHI 260 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ IIDIA + RKI + G SL +V +A VG + + + +S ++++ Sbjct: 261 HRIQQIIDIAVRNHRKIAIDGRSLVKVFEIAPTVGCLNIPEGVLVSLAEVDKLKDNKVVI 320 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A N L+ V Sbjct: 321 LCTGTQGEPMAALSRIAKNMHKHIKVKEGDTVIISATPIPGNEKAASSNINNLLRFDAEV 380 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + + +HVSGH + K M I+P+ + +HGE L AH + A++ G+ + Sbjct: 381 VFKKI-AGIHVSGHGSKEEQKLMLNLIKPKHFMPVHGELRMLKAHMKTAMETGVAKNNIL 439 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NG + + + +I +V G L DG IG I R+QLS G + V ++ Sbjct: 440 ITQNGNKVEVTKNYAKINGKVTAGETLVDGLGIGDIGSAVIKDRQQLSQDGIVVVAYTIE 499 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI G Y D ++ K + + ++ K+ LL+ ++ Sbjct: 500 RKTGKIIAGPEIATRGF-VYMKDAEELMKEASDLLEEKIPFSEKYLPKEWGLLKNNVKDC 558 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + P++ I ++ Sbjct: 559 AAKFFYNKTKRNPMILPIITEL 580 >gi|290963043|ref|YP_003494225.1| hydrolase (metallo-beta-lactamase superfamily) [Streptomyces scabiei 87.22] gi|260652569|emb|CBG75702.1| putative hydrolase (metallo-beta-lactamase superfamily) [Streptomyces scabiei 87.22] Length = 561 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 172/553 (31%), Positives = 290/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ + K +++DCGV FP+++ PGVD++ PD T I Sbjct: 19 LRVTALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEENQPGVDVILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH GA+ L +PV S + LEAK + + + + Sbjct: 75 DDIVALVLTHGHEDHIGAVPYLLRERSDIPVVGSKLTLAFLEAKLKEHGIRPRTVRV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 133 EADRRRFGPFDCEFVAVNHSIPDSLAVAIRTGAGMVLHTGDFKMDQFPLDDRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 193 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R +++A D+G +K L +S + P ++ ++ TGSQG Sbjct: 253 DAAHQHGRKVAFVGRSMVRNMAIARDLGYLKVPSGLVVSTKELEKLPDHKITLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ E DTV+ +S IPGNE AI + N L G V+ + Sbjct: 313 EPMAALSRMANRDHV-IRIGEGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+A V +G + Sbjct: 371 KVHVSGHASAGELVYCYNIVKPRHVMPVHGEWRHLRANGDLAIRTGVAPDRVVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R LS G ++V ++D + Sbjct: 431 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLTLSEEGVVTVVAIVDADTGALA 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 491 EAPDFLARGFVHDDTTFEPVVP----VIEKTLAAAAEEGVGDARQLEQLLARAVANWAFR 546 Query: 541 VWGKKPLVTVFIN 553 +KPL+ I Sbjct: 547 THRRKPLIIPVII 559 >gi|306834343|ref|ZP_07467460.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] gi|304423516|gb|EFM26665.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] Length = 560 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 165/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----KDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAKL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 122 YEINANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKIV+ G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKDYHASEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H LA+ G+ + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMLKIHAGLAMDTGVPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L DG IG + R LS G + +D Sbjct: 420 NGDVLALTASSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDT 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGDLIRESQRVLFNAIRIALKNQDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|254437900|ref|ZP_05051394.1| RNA-metabolising metallo-beta-lactamase family [Octadecabacter antarcticus 307] gi|198253346|gb|EDY77660.1| RNA-metabolising metallo-beta-lactamase family [Octadecabacter antarcticus 307] Length = 550 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 199/550 (36%), Positives = 303/550 (55%), Gaps = 2/550 (0%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERK 66 +LPLGG GEIGMN +YGYG + + I++D GV+FP D PGVDL+ PDI+++ + Sbjct: 2 YLPLGGAGEIGMNCYVYGYGPADAERLIVVDLGVTFPDMDGTPGVDLILPDISWLAARKS 61 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + AIFITH HEDH GA+ L+ L P+YA F L K S K + Sbjct: 62 QIEAIFITHGHEDHVGAVGHLYERLGAPIYARAFTANLARRKMSEHGFSDKTVKTVGKWP 121 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + V G F + V ++HSIPE+ LVI S G I+HTGD+K+D + +G+ D D ++ Sbjct: 122 ETVKAGPFEVGFVPISHSIPESSGLVIDSKGGRIIHTGDFKIDVEPGIGEPFDHDLWASL 181 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G +G+ AL+CDSTN SE + I + NAKG V TTF+S+VSR+R+I Sbjct: 182 GKDGVKALVCDSTNVFSREEGRSESTVGPEIEKFLINAKGMVAATTFASNVSRVRTIALA 241 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 AE+ GR + LLG S++R+V A +VGI+ + E G +PRE ++++ TGSQGE R Sbjct: 242 AERAGRSVCLLGRSMRRMVEAATEVGILNDFPNVIPPEDVGNFPRENVLLLVTGSQGERR 301 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +A AQL+ G+ + + E DT +FSS+ IPGNE + H+ N+ E GV V+ + + H Sbjct: 302 AASAQLANGKYMGITMKEGDTFLFSSKTIPGNEKGVIHVMNQFSELGVDVVDDSSGGLYH 361 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGH DL M I+PQ L+ +HGE HL H ++ G+ V NG M+ L Sbjct: 362 VSGHANRPDLDTMRDLIKPQTLIPMHGEHRHLREHVKIGEAAGVQGV-LAVNGMMIDLSG 420 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIV 486 + ++++ + G DG + D + R +++ GH+ V +++D + + G P Sbjct: 421 NKPKVVEHIETGRMYLDGSVKVGQFDGVVRDRIRMALNGHVIVTLIIDENGDPMGDPWCE 480 Query: 487 DIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 +G+P + + +L + + + D L + + + R GKKP Sbjct: 481 IMGLPKQGRNNAPLADVLEEDLSQFLARANDRTLADDDKLEKELRTITRKTAHGEIGKKP 540 Query: 547 LVTVFINKIS 556 VTV I++++ Sbjct: 541 EVTVVISRLA 550 >gi|284044691|ref|YP_003395031.1| beta-lactamase [Conexibacter woesei DSM 14684] gi|283948912|gb|ADB51656.1| beta-lactamase domain protein [Conexibacter woesei DSM 14684] Length = 556 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 179/563 (31%), Positives = 299/563 (53%), Gaps = 15/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L LPLGG+GEIG NM + Y + +++D G+ FP + G+DLV PD T+ Sbjct: 1 MSGGTLRVLPLGGLGEIGKNMTVVEY----DDRIVVVDTGLRFPTAEQMGIDLVLPDFTY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH----VPVYASPFAIGLLEAKRVYERVSK 116 + +++ AI ITH HEDH GAL + L PVY P A+ + +K R+ Sbjct: 57 LRDRVEDIEAIVITHGHEDHLGALPWVLRELGTEDAPPVYGGPLAMAMARSKLDEHRIRD 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + G+ ++ G F IE + + HSIP++ A+ I + VG ++ TGD+K D + G Sbjct: 117 VVLEDV-PDGETIEAGPFDIELIHMTHSIPDSNAVAITTDVGTVLITGDYKFDQTPVDGR 175 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D L +G +G+L L DSTNA R G SE G+ ++ ++ +G ++VT+F+S+ Sbjct: 176 PADMSRLAELGRDGVLLLCGDSTNADRPGYSPSEAGVGPHLEEVFSRCEGRIIVTSFASN 235 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + R++ ++D A +GRK+ L+G S+++ V++ +G I+ D + + +P E+++ Sbjct: 236 IHRVQQVVDAAAALGRKVALVGRSMRKNVNIGRSLGHIELPDGILVQPREIDQFPDERIV 295 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I+TGSQGEP SAL +++ + R V+L D+V+FS+ IPGNE A+ +RL G Sbjct: 296 IISTGSQGEPLSALRRMAHNDHRQVRLHAGDSVVFSATPIPGNERAVNETIDRLYHIGCD 355 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 VI A+ PVH SGH Y +LK M RP+ ++ +HG+ + H +LA GI Sbjct: 356 VIT-TADAPVHASGHGYQEELKLMLNLTRPRYVLPMHGDFKRIHLHAQLAESVGIDPDAI 414 Query: 416 V--RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG L L D+V G+ DG IG AD+ + RR LS G V + Sbjct: 415 FQGENGLPLELDERGARWGDKVQSGMIFVDGVDIGDPADVALRDRRMLSADGIFIVVATI 474 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + PE++ G+P + ++ + + V ++ + R +++ LL++ + Sbjct: 475 SEQDGSSVAPPEVIFRGVP-FLEQADELIEEIRGAVEDSLDAAAKDRVREVDLLQQQLHD 533 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 L + + ++P+V + ++ Sbjct: 534 DLAAFVYDRLKRRPMVLPVVVEV 556 >gi|229823022|ref|ZP_04449092.1| hypothetical protein GCWU000282_00315 [Catonella morbi ATCC 51271] gi|229787835|gb|EEP23949.1| hypothetical protein GCWU000282_00315 [Catonella morbi ATCC 51271] Length = 572 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 174/563 (30%), Positives = 288/563 (51%), Gaps = 13/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E LGG+GEIG NM YG + I++DCGV FP+DDL G+D V PD ++ Sbjct: 5 LKNNETGVFALGGLGEIGKNM----YGVQFQDEIILLDCGVMFPEDDLLGIDYVIPDFSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 IM+ + + A+ I+H HEDH G + L ++VP+YA A L+ K + ++ Sbjct: 61 IMQNQSKVKALIISHGHEDHIGGIPFLLQQINVPIYAGKLAASLIRNKLQERGLLRQAEI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + ++ HSIPE +V+++P GNIV TGD+K D + D Sbjct: 121 HEIDEDAVIRFRKTTVSFYLTTHSIPEAYGVVVKTPPGNIVFTGDYKFDFTPVG-KPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ SE+ + ++I +I++ +G V+ TF+S+VSR+ Sbjct: 180 HRMAKIGEEGVLVLLGDSTNSEIPTFTKSEQVVGQSIKNIIQKVEGRVIFATFASNVSRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIAT 299 + +++ A++ GRKI + G S++ + ++G IK D LF+ P EQLI++ T Sbjct: 240 QQVVETAQETGRKIAVFGRSMESAIKTGRELGYIKDDDELFVEQRDLNRVPAEQLIILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN +++ + N+L E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQIQVQPNDTVIFSSSPIPGNTMSVNRVINQLCEVGAHVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + M + ++P+ + +HGE LA Q GI + Sbjct: 360 KVN-NIHTSGHGGQQEQLLMMRLMKPKYFMPVHGEFRMQSIQAGLAQQTGIPKENCFVME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG+ML + D I + DG IG + I RR LS G + ++ LD + Sbjct: 419 NGQMLAVTADSARIAGKFTANSIYVDGSGIGDIGHVVIRDRRNLSEDGLVVISATLDYEN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL--LRESISSAL 534 + P+I+ G Y + + L ++ + + ++ +R+ I + Sbjct: 479 KQLVSGPDIMSRGF-IYMRESSDLIHSLQSSLKSAINRGLNENGNNVSERLIRDMIMDTI 537 Query: 535 RSLLKKVWGKKPLVTVFINKISR 557 L+ + + P++ + I++ Sbjct: 538 VPLIYERTERSPMIMPVLLDINK 560 >gi|254420157|ref|ZP_05033881.1| RNA-metabolising metallo-beta-lactamase family [Brevundimonas sp. BAL3] gi|196186334|gb|EDX81310.1| RNA-metabolising metallo-beta-lactamase family [Brevundimonas sp. BAL3] Length = 557 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 212/559 (37%), Positives = 330/559 (59%), Gaps = 6/559 (1%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK +ELVFLPLGG E+GMN+ YG+G + R+W+++D GV+F PGVD++ PD Sbjct: 1 MKKQNQDELVFLPLGGSDEVGMNLNAYGFGPEADREWLIVDVGVTFGDLSTPGVDVIVPD 60 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +++ + + I +THAHEDH GAL LW + P+YA+PF L+ K + + Sbjct: 61 PSYLE--GETIKGIVLTHAHEDHIGALGWLWPRIKAPIYATPFTAYLIRDKLRERGILDE 118 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + I G VD+G+F + V ++HSI E L I +P+G + HTGDWK+DD I+G+ Sbjct: 119 VQLIEVPLGGTVDIGSFGVTFVNMSHSIAEPSGLAIDTPLGVVFHTGDWKIDDQPIIGEK 178 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 TD ++ A+G+EG+LA++CDSTN G SE + I ++ + KG V V F+S+V Sbjct: 179 TDAPAIRAMGDEGVLAMVCDSTNVFVPGVAGSEGDVAVAITKLISSLKGRVAVGCFASNV 238 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 +R+ S+I AE GR++ L G S+ R+ + A VG+++ + FLSDE ++P +Q++ + Sbjct: 239 ARMDSVIRAAEACGRRVSLAGRSMHRITAAAKHVGMLQDVKPFLSDEEARVWPADQILYL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGE R+AL++++ G VKL D IFSSR IPGNE+AIG++++RL ++GVR+ Sbjct: 299 CTGSQGEARAALSRVADGTHPVVKLGLGDHCIFSSRQIPGNELAIGNLQDRLADRGVRLY 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 E +HVSGHP ++LK+MY+W+RPQ+ V HG L+ H LA G+ R Sbjct: 359 TEKDHPGIHVSGHPCRDELKQMYEWVRPQIAVPTHGVRRFLLEHANLAKDIGVKETVTPR 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG M+RL P P +IIDEV +G DG ++ + +RR S G L V+ LD Sbjct: 419 NGDMVRLAPGPAKIIDEVPNGRLYVDGGMLVTEQGEALKERRHASTNGVLIVSFALDKRG 478 Query: 478 NIFGVPEIVDIGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I +I +G+P G L + V + L D ++ ++++ L+ Sbjct: 479 RIASDIDIRSVGLPGDTATPLGDALDNLAERVEQVIKSLKGDALDDEMVIEQAVARVLKK 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 +++W ++P+V + ++ Sbjct: 539 ASQQIWDRRPIVETVVLRV 557 >gi|172040543|ref|YP_001800257.1| hypothetical protein cur_0863 [Corynebacterium urealyticum DSM 7109] gi|171851847|emb|CAQ04823.1| conserved hypothetical protein [Corynebacterium urealyticum DSM 7109] Length = 740 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 169/553 (30%), Positives = 285/553 (51%), Gaps = 15/553 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+ EIG NM ++ Y + ++IDCGV FP PGVDL+ PD +++ + Sbjct: 179 LRIVALGGISEIGRNMTVFEY----DGRLLLIDCGVLFPSSGEPGVDLILPDFSYLDDKW 234 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ ITH HEDH GA+ L +P+ AS F L++AK R KI + Sbjct: 235 DRVEALVITHGHEDHIGAIPWLLKQRADIPIVASRFTAALIQAKTQEHRQRPKI--VEVN 292 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 V+ G F + VNHSIP+ + + +++P G ++HTGD KLD I TD +L Sbjct: 293 DQSHVNYGPFDLRFWNVNHSIPDCLGIALKTPAGLVIHTGDIKLDQTPIDDRPTDLPALS 352 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G+EG+ ++CDSTNA G SE + + ++ +AK V++ +F+S+V+RI+S + Sbjct: 353 RFGDEGVDLMLCDSTNAATPGFSGSEADVAPTLTRLICDAKQRVILASFASNVARIQSAV 412 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 + A RK+ G S+ R + +A +G + +S + ++++I TG+QG Sbjct: 413 NAAVAANRKVAFTGRSMIRNMEIAERMGYLNAPRGTIVSMDEASRMAPHKVVLITTGTQG 472 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++R E R + + D +I SS +PGNE A+ + N L + G V+ + Sbjct: 473 EPMAALSRMARREHRQITVRNGDLIILSSSLVPGNEEAVFGVINMLSQIGATVVTSR-DA 531 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VH SGH +L +Y RP+ + +HGE HL A+++LA+ G+ VP +NG + Sbjct: 532 NVHTSGHGLAGELLFLYNAARPRNAMPVHGEWRHLRANRDLAISTGVDPKNVPLAQNGVV 591 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L +++ ++ G DG +G + R ++ G ++V+V++DN Sbjct: 592 VDLHNGHAKVVGQITVGNLYVDGTRMGDVDADTLEDRTAMAEGGLIAVSVVIDNRTGRPL 651 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G GD + K L + ++DL + + +++ L + Sbjct: 652 EAPHIQAKGFS---GDAKDLLKELGEIADDVMMDLAGEGENNPYRMAQTLRRRLARHVSD 708 Query: 541 VWGKKPLVTVFIN 553 W +KPL+ + Sbjct: 709 KWNRKPLIVPTVV 721 >gi|260434159|ref|ZP_05788130.1| metallo-beta-lactamase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417987|gb|EEX11246.1| metallo-beta-lactamase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 555 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 201/556 (36%), Positives = 315/556 (56%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG+P + I++D GV+FP D PGVDL++ DI+ Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGAPGKERLILVDLGVTFPDMDTTPGVDLIYADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L AIF+THAHEDH GA+ L P++A F + K + Sbjct: 61 WLKERADRLEAIFVTHAHEDHVGAVALCHEMLGAPIHARAFTANIARKKMEEAGHPEDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G F++ + V+HSIPE+ ALVI +P G IVH+GD+KLD ++G+ D Sbjct: 121 RTVSAWPEQIKAGPFTVGFLPVSHSIPESAALVIDTPAGRIVHSGDFKLDTTPVVGEPFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + G+ AL+CDSTN SE + I +++ A G V+ TTF+S+V+R Sbjct: 181 EALWAEVAKPGVKALVCDSTNVFSPHPGRSESEVGPAITQLVEQASGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR +VLLG +++R++ A + GI+ LS E PR+ L++I T Sbjct: 241 VKTLAEAGHRAGRSVVLLGRAMRRMIEAATETGILTDFPRVLSAEEALDLPRQNLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R ++L E D +FSS+ IPGNE + I N+L E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYRGIELKEGDLFLFSSKTIPGNERGVIRIMNQLSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+R++ I PQ+++ +HGE HL H +LA G A V NG Sbjct: 360 DSNGLYHVSGHANRPDLERVHALIDPQMVIPMHGEHRHLREHAKLAEAGGRAGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ML L + +++D V G DG + D + R +++ GH+ V V+LD Sbjct: 419 TMLDLSGNAPQVVDYVETGRTYLDGSVKIGALDGVVRDRIRMALNGHVIVTVILDEDDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+P + ++L + + ++ ++ L E++ +R + Sbjct: 479 LGEPWCDTMGLPETGASRAGLVEVLEEDLNQFLMRADGKTLRNDDKLEEAMRRIVRQSAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV I+++ Sbjct: 539 IEIGKKPEVTVVISRM 554 >gi|326790921|ref|YP_004308742.1| ribocuclease J [Clostridium lentocellum DSM 5427] gi|326541685|gb|ADZ83544.1| Ribocuclease J [Clostridium lentocellum DSM 5427] Length = 552 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 180/559 (32%), Positives = 295/559 (52%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN + +PLGG+G IG N+ + Y DCG+ FP + + GVDLV PDIT+ Sbjct: 1 MKN-AVKVIPLGGLGSIGKNITVIEYEEEIIVI----DCGMGFPDEQMYGVDLVIPDITY 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IF TH HEDH GA+ + +++P+Y +P +G++E K + K C Sbjct: 56 LLQNKNKVKGIFFTHGHEDHIGAVPYILKQMNIPLYGTPLTLGIIENKLQEHGLLTKSEC 115 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +AGD + + +E VR HSI + + +P G I HTGD+K+D + D Sbjct: 116 HCVEAGDVIALEQIKVEFVRSTHSIAGACCIAVHTPEGIIFHTGDFKVDYTPVDQKGMDL 175 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EGIL L+ DSTN R+G SE I K + + N KG ++V TF+S++ RI Sbjct: 176 QRIGELGKEGILLLLADSTNVERKGHSPSEVTIGKTLERLFDNVKGRIIVATFASNIHRI 235 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIAT 299 + II+ A GRK+ G S++ + VA +G + + + E Y +Q+ ++ T Sbjct: 236 QQIINAAVLYGRKVAFSGRSMENITKVASSLGYLNIPEATLIEGEQIKNYSNDQITIVTT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +ALA+++ G+ R++++ D I S+ IPGN+ + + N L ++G +VI + Sbjct: 296 GSQGEPMAALARIAFGKHRSIQIEPNDLFIISASPIPGNDKLVSKVINELYKKGAQVIYK 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 D E VHVSGH Y +LK M+ PQ + +HGE HL+ H+ LA Q G+ + + Sbjct: 356 DLE-EVHVSGHAYKEELKLMHTLTHPQYFMPVHGEYRHLIHHRNLARQMGMPHDHIFILE 414 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G +L + +I V G L DG IG ++ + R+ L+ G L V +D Sbjct: 415 DGDVLEVNKVTAGVIGRVRAGNILVDGIGIGDVGNIVLRDRKHLAEEGMLIVVAAIDLET 474 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 Y+I P+I+ G Y D + + + + ++ + +L+ SI + Sbjct: 475 YSIMSGPDIITRGF-VYAKDSEDLIEEVKAVANKELEMCLAYQMTEWHILKTSIKKVVEQ 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + ++P + I ++ Sbjct: 534 LLYEKTKRRPTILPIIMEV 552 >gi|254475247|ref|ZP_05088633.1| metallo-beta-lactamase family protein [Ruegeria sp. R11] gi|214029490|gb|EEB70325.1| metallo-beta-lactamase family protein [Ruegeria sp. R11] Length = 550 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 197/551 (35%), Positives = 307/551 (55%), Gaps = 3/551 (0%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 +++LPLGG GEIGMN +YGYG P + +++D GV+FP D PGVDL+ PDI ++ + Sbjct: 1 MIYLPLGGAGEIGMNAYVYGYGKPGKERLVLVDLGVTFPDMDSTPGVDLIMPDIRWLKER 60 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L IFITHAHEDH GA+ L+ L+ P+YA F L K + + Sbjct: 61 ADQLEGIFITHAHEDHIGAVAHLYRDLNTPIYARAFTANLARRKMDEAGLDSEQVKTVSA 120 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G F+I ++HSIPE+ LVI +P G +VHTGD+K D I+G+ D + Sbjct: 121 WPEVTQLGPFTIGVAPISHSIPESGGLVIDTPAGRVVHTGDFKTDPTPIVGEPFDPEMWA 180 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 I +G+ AL+CDSTN SE + I ++ A+G V+ TTF+S+V+R++++ Sbjct: 181 EIAKDGVKALVCDSTNVFSLNPGRSEVEVGPEITRLVGEAEGMVVATTFASNVARVKTLA 240 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + GR +VLLG +++R++ A + G+++ +S E+ PR+ L++I TGSQGE Sbjct: 241 EAGHAAGRSVVLLGRAMQRMIDAATETGVLQGFPKVVSVEAAQELPRDNLMLIVTGSQGE 300 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 R+A AQL+RG+ R V++ E D +FSS+ IPGNE + I N+ E+GV V+ +D+ Sbjct: 301 RRAASAQLARGKYRGVEVKEGDLFLFSSKTIPGNERGVIRIINQFSEKGVDVV-DDSSGL 359 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 HVSGH DL+RM+ I+PQ+L+ +HGE HL H L +GIA NG M+ L Sbjct: 360 YHVSGHANRPDLERMHDIIKPQMLIPMHGEHRHLRQHARLGEAKGIASA-VAVNGMMMDL 418 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPE 484 D +++D V G DG + D + R +++ GH+ V ++LD G P Sbjct: 419 TGDAPKVVDYVDTGRTYLDGSVKYGALDGVVRDRIRMALNGHVVVTLILDEEDEPLGEPW 478 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 G+ + +++ + + V+ ++ L E++ R + GK Sbjct: 479 CDIKGLAETGSSNAALVEVMEEDLNQFVMRADAKTLRNDDKLEENLRRVARQTAQNEIGK 538 Query: 545 KPLVTVFINKI 555 KP VTV I+++ Sbjct: 539 KPEVTVVISRM 549 >gi|311744170|ref|ZP_07717975.1| metallo-beta-lactamase [Aeromicrobium marinum DSM 15272] gi|311312525|gb|EFQ82437.1| metallo-beta-lactamase [Aeromicrobium marinum DSM 15272] Length = 559 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 172/551 (31%), Positives = 284/551 (51%), Gaps = 13/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ Y K +++DCGV FP++ PGVDL+ PD I Sbjct: 19 LRVFALGGLGEIGRNMTVFEY----DGKLLVVDCGVLFPEEHHPGVDLILPDFGPIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G L L ++PV S + L+ K R+ K++P Sbjct: 75 DDIVAVVLTHGHEDHIGGLPYLLRERGNIPVAGSQLTLAFLDPKLKEHRL-KEVPKHIVS 133 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD G F E V VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD + Sbjct: 134 EGDIETFGPFECEFVAVNHSIPDALAVAIRTPAGVVLHTGDFKMDQLPLDGRITDLRAFA 193 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G G+ + DSTNA G SE+ I I + + ++V +F+S + R++ ++ Sbjct: 194 RLGEAGVDLFLTDSTNADVPGFTTSERNITPAIEAVFARSTKRIIVASFASHIHRVQQVL 253 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 D A + RK+ +G S+ R + +A D+G +K + D+ P E++++++TGSQGE Sbjct: 254 DTAVKYDRKVAYVGRSMVRNMQIARDLGYLKVPDGVVVDKIDAA-PPERMVLMSTGSQGE 312 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ V L DTV+ +S IPGNE AI + + L + G +V+ + Sbjct: 313 PMAALSRMANNSHPQVSLEPGDTVLLASSLIPGNENAIYRVIDGLTKLGAKVVHKG-NAL 371 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 VHVSGH +L Y ++P ++ +HGE HL A+ LA Q G+ V +G ++ L Sbjct: 372 VHVSGHASAGELLYCYNIVQPTNVMPVHGEIRHLHANGALATQTGVPNVLLAEDGYVVDL 431 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVP 483 I G DG +G +D + RR L G +SV V++D+ I P Sbjct: 432 VDGHASITGAFDCGYVYVDGSSVGDISDSDLKDRRVLGEEGFISVVVVVDSTSGKIVTGP 491 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 EI GI + + + ++ + +D + L +++ L S + Sbjct: 492 EIHARGIA----EDDSVFDEVRSKIVVDLERAMADGTRDARQLEQTVRRTLGSYAGRRLR 547 Query: 544 KKPLVTVFINK 554 ++P++ + + Sbjct: 548 RRPMIVPIVLE 558 >gi|294632191|ref|ZP_06710751.1| metallo-beta-lactamase [Streptomyces sp. e14] gi|292835524|gb|EFF93873.1| metallo-beta-lactamase [Streptomyces sp. e14] Length = 554 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 168/553 (30%), Positives = 288/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 12 LRVTALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + LEAK + + + + Sbjct: 68 DDIVAMVLTHGHEDHIGGVPYLLRERSDIPVVGSRLTLAFLEAKLKEHGIRPRTVRV--R 125 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 126 EGDRRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHTGDFKMDQFPLDDRITDLRAFA 185 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 186 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 245 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L ++ + P ++ ++ TGSQG Sbjct: 246 DAAHQYGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVTTKELEKLPDHKITLVCTGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 306 EPMAALSRMANRDHM-IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 364 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANADLAIRTGVDPDRVVIAEDGVV 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 424 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLALAAEGVVTVVAIVDADTGALA 483 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G + ++ + T+ + D + L + I+ A+ + + Sbjct: 484 EAPDFLARGFV----HDESTFEPVVPVIEKTLATAAEEGVGDARQLEQLIARAVANWAFR 539 Query: 541 VWGKKPLVTVFIN 553 +KPL+ I Sbjct: 540 AHRRKPLIIPVII 552 >gi|226366143|ref|YP_002783926.1| hypothetical protein ROP_67340 [Rhodococcus opacus B4] gi|226244633|dbj|BAH54981.1| hypothetical protein [Rhodococcus opacus B4] Length = 600 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 291/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP+D PGVDL+ PD I Sbjct: 51 LRVVALGGIGEIGRNMTVFEH----QGKLLIVDCGVLFPEDQQPGVDLILPDFRHIEDRM 106 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ AK R + + Sbjct: 107 DDVEAVVLTHGHEDHIGAIPFLLRLRPDLPVVGSRFTLALVAAKCREHRQRPNLVEVV-- 164 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + + G F E VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD Sbjct: 165 EGQRTEHGPFECEYFAVNHSIPDAIAVAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFS 224 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I + +++ A+ V+V +F+S V RI+ ++ Sbjct: 225 RLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKARQRVIVASFASHVHRIQQVV 284 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + R++ +G S+ R + +A D+G + D L + ++ P ++L++I+TGSQG Sbjct: 285 DVAHRYNRRVAFVGRSMVRNMQIAQDLGYLSVPDGLVVDIDTAANLPDDRLVLISTGSQG 344 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + D V+ +S IPGNE ++ + N L ++G V+ + + Sbjct: 345 EPLSALSRMARGEHRQINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQS-A 403 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP + +HGE HL A+ LA G+ + +G + Sbjct: 404 KVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVV 463 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + + EI+ +V G DG +G D ++ R L G +++NV++D+H Sbjct: 464 VDMVDGLAEIVGQVPVGHVYVDGLSVGDVGDSTLSDRLVLGEGGFIAINVVIDDHTGRAV 523 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ G D K + V ++ L D + ++I + + Sbjct: 524 STPEVSGRGFS----DDPTALKDAAQLVEAELLRLATEGINDAHRIAQAIRRVVGRWVAD 579 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 580 KYRRRPMIVPTVIAV 594 >gi|327194823|gb|EGE61657.1| putative beta-lactamase family protein [Rhizobium etli CNPAF512] Length = 556 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 317/555 (57%), Positives = 421/555 (75%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPV+AS F GLLEAKR +E+ ++P Sbjct: 63 ANERKNLKAIIITHAHEDHYGALADLWPGLNVPVFASAFTSGLLEAKRNFEKARIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGD ++VG FSIE V VNHSIPE M+L+IR+P GN++HTGDWK+D + LG +TD+ Sbjct: 123 TPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I+++A+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVILTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+LSR EMRNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 303 SQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD- 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP N+L+RMY+W RP+++V +HGE HL AHKELA Q GI VP VRNG Sbjct: 362 TEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGIPLVPRVRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +LRL P P+E+I E HG KDG LIG F ++GI +R++LS+VGH++V+++LD Y+I Sbjct: 422 ILRLAPGPVEVIGEAPHGRIYKDGMLIGDFDEMGIGERKKLSYVGHVAVSIVLDARYDIV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P++V IG+P YD +G ++ L I+ + +P+ RRKDL +L+E++ A+R+ + Sbjct: 482 GDPDLVSIGLPVYDDEGDEMEDTLFDAAISAIESIPRARRKDLDMLQEAVRRAIRAAANQ 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKP+VT F+ K+ Sbjct: 542 SWGKKPVVTAFVTKV 556 >gi|229815350|ref|ZP_04445685.1| hypothetical protein COLINT_02396 [Collinsella intestinalis DSM 13280] gi|229809130|gb|EEP44897.1| hypothetical protein COLINT_02396 [Collinsella intestinalis DSM 13280] Length = 559 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 182/561 (32%), Positives = 285/561 (50%), Gaps = 16/561 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N L +PLGG+ IG NM + G +++D G+ FP D+ PG+DLV PD T++ Sbjct: 8 SNVTLKVIPLGGLDGIGKNMTAFECG----DDMVLVDAGLMFPDDNQPGIDLVLPDYTYV 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L I ITH HEDH GAL L L+ VP+++S +G +E K R+ Sbjct: 64 LENEHKLRGIIITHGHEDHTGALPYLLQDLNNKVPIFSSKLTLGFIEGKLSEFRIRA-PK 122 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G V++G FSIE HSIP + + +++P G +VHTGD+KLD I G D Sbjct: 123 FREVKGGSHVNLGCFSIEFFSTTHSIPGALGVFLKTPAGTVVHTGDFKLDQTPIDGVTPD 182 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L G +G+ LM DSTNA G SE + +I +KNAKG V V +FSS + R Sbjct: 183 YGALAKFGKQGVDLLMSDSTNATVPGFTKSEAEVGPSILHAIKNAKGRVFVASFSSHIHR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIA 298 ++ I D A++ RKIV+ G S+ VA ++G +K D+ L P ++L+V+ Sbjct: 243 LQQICDAAKKCNRKIVVTGRSMLTNTRVARELGYLKVDENDLLDAFEINGIPEDKLVVMC 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ GE + + + E DTVI S+ +PGNE A+ + N L + G V Sbjct: 303 TGSQGEPLSALSRMANGEHKTLSIHEGDTVIISATPVPGNEKAVQQVVNSLAKLGCDV-Y 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + VHVSGH +LK M +P + +HGE +HL AH L + G+ + + Sbjct: 362 DKSRALVHVSGHASQEELKLMLALTKPSYFMPVHGEAVHLRAHAALGQKMGVPAKNIFVI 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L + ++ V G+ DG IG + + R++L+ G ++V +LD Sbjct: 422 DNGDSLEMRDGIVKRGRSVESGVVYVDGLRIGDTDPIVLRDRQKLASDGMVTVVAMLDMK 481 Query: 477 YNIFGVPEIVDIG--IPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 G E G P D + + + + +R+++ AL Sbjct: 482 RKKIGDLEFSGRGVSFPIDDQFSADASAAIQRAIEKGKFNFSSSGT---DAIRKAVRDAL 538 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + +P++ + ++ Sbjct: 539 SNYIWNNNRTRPMIIPVVMEV 559 >gi|210633034|ref|ZP_03297634.1| hypothetical protein COLSTE_01542 [Collinsella stercoris DSM 13279] gi|210159321|gb|EEA90292.1| hypothetical protein COLSTE_01542 [Collinsella stercoris DSM 13279] Length = 559 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 177/557 (31%), Positives = 284/557 (50%), Gaps = 16/557 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ IG NM + G ++ID G+ FP D+ PG+DLV PD T++++ Sbjct: 12 LKVIPLGGLDGIGKNMTAFECG----DDMVLIDAGLMFPDDNQPGIDLVLPDYTYVLENE 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L I ITH HEDH GAL L L+ VP+++S +G +E K R+ Sbjct: 68 HKLRGIIITHGHEDHTGALPYLLQDLNNKVPIFSSKLTLGFIEGKLSEFRIRA-PKFREV 126 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G +++G FSIE HSIP + + +++P G +VHTGD+KLD I G D ++ Sbjct: 127 KGGSHINLGCFSIEFFSTTHSIPGALGVFLKTPAGTVVHTGDFKLDQTPIDGVTPDYGAI 186 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+ LM DSTNA G SE + ++ I+KNAKG V V +FSS + R++ I Sbjct: 187 AKFGKQGVDLLMSDSTNATVPGFTKSEAEVGPSLLHIIKNAKGRVFVASFSSHIHRLQQI 246 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQ 302 + A+ RK+V+ G S+ VA ++G +K D+ + P ++++V+ TGSQ Sbjct: 247 CNAAKTCNRKVVVTGRSMLTNTRVARELGYLKVDESDLVDAFDINGLPEDKIVVMCTGSQ 306 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL++++ GE + + + E DTVI S+ +PGNE A+ + N L + G V + + Sbjct: 307 GEPLSALSRMANGEHKTLSIHEGDTVIISATPVPGNEKAVQQVINSLAKLGCDV-YDKSR 365 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +LK M +P + +HGE +HL AH L + GI + + NG Sbjct: 366 ALVHVSGHASQEELKLMLALTKPTFFMPVHGEAVHLRAHAALGEKMGIPAKNIFVIDNGD 425 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 L + ++ V G+ DG IG + + R++L+ G ++V +LD Sbjct: 426 TLEMRDGRVKRGRSVESGVVYVDGLRIGDTDPIVLRDRQKLASDGMVTVVAMLDMKRKQI 485 Query: 481 GVPEIVDIG--IPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G E G P D + + + + +R+++ AL + + Sbjct: 486 GDIEFSGRGVSFPIDDQFSADASAAVQRAIEKGKFNFSSSGT---DAIRKAVRDALSNYI 542 Query: 539 KKVWGKKPLVTVFINKI 555 +P++ + ++ Sbjct: 543 WNNNRTRPMIIPVVMEV 559 >gi|209548879|ref|YP_002280796.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534635|gb|ACI54570.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 556 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 317/555 (57%), Positives = 421/555 (75%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P Sbjct: 63 ASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKARIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGD +++G FSIE V VNHSIPE M+L+IR+PVGN++HTGDWK+D + LG +TD+ Sbjct: 123 TPFKAGDTINIGPFSIEGVAVNHSIPEPMSLMIRTPVGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I+++A+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVILTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+LSR EMRNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 303 SQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD- 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP N+L+RMY+W RP+++V +HGE HL AHKELA Q GIA VP VRNG Sbjct: 362 TEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGIALVPRVRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +LRL P P E+I + HG KDG LIG F ++GI +R++LS+VGH++V+V+LD Y+I Sbjct: 422 ILRLAPGPAEVIGQAPHGRIYKDGSLIGDFDEMGIGERKKLSYVGHVAVSVVLDARYDIV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P++V IG+P YD +G ++ L I+ + +P+ RRKD+ +++E++ A+R+ Sbjct: 482 GDPDLVSIGLPVYDDEGEEMEDTLFDAAISAIESIPRARRKDIDMVQEAVRRAIRAAANH 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKP+VT F+ K+ Sbjct: 542 AWGKKPVVTAFVTKV 556 >gi|49475643|ref|YP_033684.1| hypothetical protein BH08800 [Bartonella henselae str. Houston-1] gi|49238450|emb|CAF27678.1| hypothetical protein BH08800 [Bartonella henselae str. Houston-1] Length = 558 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 251/553 (45%), Positives = 389/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +E VFLPLGGVGEIGMN+A YG+G + R+W+++D GVSF +LPG DL+ PDI F+ Sbjct: 5 NKDEFVFLPLGGVGEIGMNLAAYGFGPQNLREWLLVDMGVSFAGPELPGADLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L VP+Y +PF GLLE+KR + S +I Sbjct: 65 ENEKHNVRGLVLTHAHEDHYGAVLDLWPKLKVPLYCTPFTAGLLESKRQSDFDSHQISLN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQ GD G F++E++ VNHSIPE+++L I + +G ++HTGDWK+D G VTD+ Sbjct: 125 IFQVGDCFQAGPFAVEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSFGAVTDEK 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+G +GILAL+CDSTNA R+G SE+ ++ ++ +I+ A+G V + TF+S+V RIR Sbjct: 185 RFRALGKKGILALLCDSTNACRDGISPSEQQVQTSLSEIIAKAEGRVALATFASNVGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE +GR+++++G SLKR + +A ++G + F+S++ +G PR+++++I TGS Sbjct: 245 SIALAAESVGRQVLVVGRSLKRSIMIAQELGYMNGLAPFVSEDDYGYIPRKEIVLIVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+ALA+LSR EMRN++L+ DTVI+SSR+IPGNE +I I+NR ++ G+++I + Sbjct: 305 QGESRAALAKLSRNEMRNLQLSAGDTVIYSSRSIPGNEKSIIEIQNRFIDMGIKIITNE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +L +MY W++PQ+LV +HGE +HL A +LA Q GI V +RNG M Sbjct: 364 DALVHVSGHPRRLELLKMYDWVKPQILVPVHGEAMHLAAQADLARQAGIKMVADIRNGNM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P+P+++ID+V G KDG LIG +LGI +RR+LS+ G++++++ +++ +++ G Sbjct: 424 LRLAPEPVKVIDQVPVGRLYKDGCLIGDEDELGIRERRKLSYAGYVAISLQMNSKHDLQG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 + G+P + G + +LL V T+ ++P+ +RK+ +L++E+ A+R+ + + Sbjct: 484 DIGLTTFGLPESNEKGESLKDILLDVVENTIYNIPRIKRKNNELIQEATRRAVRAAVNEA 543 Query: 542 WGKKPLVTVFINK 554 W KKP+ TVF+++ Sbjct: 544 WQKKPVCTVFLHR 556 >gi|311030815|ref|ZP_07708905.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) protein [Bacillus sp. m3-13] Length = 558 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 284/562 (50%), Gaps = 11/562 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + LGG+GEIG N + Y + I++D G+ FP D+L G+D V PD ++ Sbjct: 4 INETNISIFALGGLGEIGKNTYVIKY----QDEIIIVDAGIKFPTDELFGIDYVIPDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + IFITH HEDH G + L + P+YA A+ L++ + + KK Sbjct: 60 LIQNKEKIKGIFITHGHEDHIGGIPYLLKEIDAPIYAGRLALELIKERLKEHGLLKKARL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + V +++ R HSIP++ + +R+P GNIVHTGD+K D I +T+ Sbjct: 120 VEIEEDKLVSFEYLAVDFFRTTHSIPDSYGICVRTPYGNIVHTGDFKFDLTPIGP-LTNM 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTN+ G +SEK I + I+++ G ++ TF+S++ R Sbjct: 179 SKIADIGKEGVLCLLSDSTNSEIPGFSLSEKEISRTIHELFSQIDGRIIFATFASNMYRF 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+ A RKIV+LG SL R V + ++G +K + + + YP +Q++VI T Sbjct: 239 KQAIEAAVLHNRKIVVLGRSLLRAVRIGTELGYLKIPKESLIEASAVNDYPDDQILVICT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ + + + +KDTVIFSS IPGN ++I I ++L G V+ Sbjct: 299 GSQGEPFAALSRIAYNKHPQLSVRKKDTVIFSSSPIPGNTLSINRIIDQLSRAGASVLHH 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH +LK M ++P V IHGE L H LA + G+ + Sbjct: 359 KL-KKIHTSGHGAQEELKLMISLLKPNFFVPIHGEYKMLKKHVSLAEECGVPLEKSFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L + I V DG IG + + R+ S G L V V +D Sbjct: 418 NGTILELNENEASITGTVPANAIYVDGDGIGDIGTIVLRDRKIFSESGILLVVVAIDFRE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+++ G + + ++ L T + + +R I + Sbjct: 478 KKIISGPQVISRGF-VFIRESEQLMGKLRDIAHTATTQSLESGNRRWSDVRSDILDQVEP 536 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + K+ ++P++ + +S++ Sbjct: 537 YIYKITKRRPMILPILMDVSKR 558 >gi|257870007|ref|ZP_05649660.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804171|gb|EEV32993.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 559 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 167/557 (29%), Positives = 274/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V D ++ Sbjct: 5 LKNNETGVFGVGGLGEIGKNC----YGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IVQNITKVKGLVITHGHEDHIGGIPYLLREANIPIYAGPLALALITNKLDEHGLLRDATL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ + +V+++P GNIV TGD+K D + + + Sbjct: 121 HEINEDTVIRFRKTSVSFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I + +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIRKIFEKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G IK D F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVESHEINRLPANETMILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L+E G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQIQIHPDDTVIFSSSPIPGNTTSVNHLINLLLEAGAHVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H +LA G+ + Sbjct: 360 KLN-NIHTSGHGGQEEQKLMLRLMKPKFFMPVHGEFRMLNIHTQLAQDVGVPKENCFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ML L D G DG IG ++ + RR LS G + +D Sbjct: 419 NGDMLALTADSARRAGHFNAGDVYVDGSGIGDIGNVVLRDRRILSEEGLVLAVATVDLTK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G Y + G++ + + + ++ +RE++S+AL+ Sbjct: 479 KEVLAGPDILSRGF-VYMRESGEMINEAQQILFRALREVLNQPDPSEHKMREAMSAALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 538 FLFEKTERHPMILSMIM 554 >gi|114765016|ref|ZP_01444163.1| metallo-beta-lactamase family protein [Pelagibaca bermudensis HTCC2601] gi|114542563|gb|EAU45588.1| metallo-beta-lactamase family protein [Roseovarius sp. HTCC2601] Length = 555 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 195/557 (35%), Positives = 312/557 (56%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M NE +++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVD++F DI Sbjct: 1 MSNERIIYLPLGGAGEIGMNCYVYGYGEPGKERLIVVDLGVAFPDMDSSPGVDIIFADIA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R + A+FITHAHEDH GA+ + L V ++A F L K S+ Sbjct: 61 WLEQNRDRIEAVFITHAHEDHIGAVGHCFERLGVRIHARAFTANLARQKLAEYGYSEDTV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V+ G F + + ++HSIPE+ ALVI +P G ++H+GD+KLD I+G+ D Sbjct: 121 QTCSKWPETVEAGPFKVGFLPISHSIPESSALVIDTPGGRLIHSGDFKLDPTPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + G+ AL+CDSTN SE + NI +++ A V+ TTF+S+V+R Sbjct: 181 PELFAEVSAGGVKALICDSTNVFSPNPGRSEVEVGPNIEELVAGAPNMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR I LLG +++R++ AI+ G++ + E PRE +++I T Sbjct: 241 VKTLAEAGSKAGRSICLLGRAMRRMIEAAIETGVLTDFPPVIGPEDAVQIPRENVMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ ++L E D +FSS+ IPGNE + I N L E+GV V+ + Sbjct: 301 GSQGERRAASAQLSRGKYNGIELKEGDMFLFSSKTIPGNEKDVIRIMNNLSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+R+++ + PQ+++ +HGE HL H +LA +G A V NG Sbjct: 360 DSAGKYHVSGHANGPDLERLHEIVSPQLVIPMHGEHRHLREHVKLAKAKGRAGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + + + + G DG + D + R +++ GH+ V V+LD Sbjct: 419 MMMDLSGNEPTVAEWIDAGRTYLDGSVQIGALDGIVRDRIRMALNGHVIVTVILDEDDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+P + ++L + + + + D + E + +R+ + Sbjct: 479 LGEPWCELKGLPETGRSNASLVEVLEEDLSQFLGRAGEKTLTDDDKIEEGMRRIVRNTAQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VT+ ++++S Sbjct: 539 NEIGKKPEVTIVVSRLS 555 >gi|329889345|ref|ZP_08267688.1| RNA-metabolising metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] gi|328844646|gb|EGF94210.1| RNA-metabolising metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] Length = 558 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 209/555 (37%), Positives = 335/555 (60%), Gaps = 3/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ELVFLPLGG E+GMN+ YG+G RKWI++D GV+F PGVD++ PD TF+ Sbjct: 6 QNDELVFLPLGGSNEVGMNLNAYGFGPAHDRKWIIVDVGVTFGDQSTPGVDVIVPDPTFL 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +N++ I +THAHEDH GAL LW + P+YA+PF L+ K + + + Sbjct: 66 E--GENILGIVLTHAHEDHIGALGWLWPRIQAPLYATPFTAFLIREKLRDAGIYEDVELH 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G V++G F + V + HSI E L I++P+G ++HTGDWK+D+D ++G+ TD D Sbjct: 124 EAPLGSTVNLGPFEVTYVTITHSIAEPNGLAIKTPLGTVLHTGDWKIDNDPVVGERTDVD 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+LA++CDSTN +G SE +K + ++++ KG V V F+S+V+R+ Sbjct: 184 FIQKLGDEGVLAMVCDSTNVFVDGVAGSEGDVKVKLAELIQGLKGRVAVGCFASNVARMH 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+I AE GR++ L G S+ R+ + A VG++ + FLS++ ++P ++++ + TGS Sbjct: 244 SVISAAEAAGRRVALAGRSMHRITAAAKSVGMLNDIKPFLSEQEAKVWPADEILYLCTGS 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL++++ G +KL E D IFSSR IPGNE++IG +++++ E+G+R+ E Sbjct: 304 QGEARAALSRVAEGTHPFIKLGEGDHCIFSSRVIPGNELSIGRLQDKMAERGIRIYTEKD 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP ++L++MYQW RPQ+ V HG HL+ H LA + RNG M Sbjct: 364 HPGIHVSGHPCRDELRQMYQWARPQIAVPTHGMRRHLIEHGNLAKDMQVPETVTPRNGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P P IIDEV G DG ++ + A + +R+ + G L V+ LD I Sbjct: 424 VRLAPGPAAIIDEVPSGRLFVDGGMLVEEAGEALRERKHAASNGILIVSFALDRRGRIAS 483 Query: 482 VPEIVDIGIPAY-DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 ++ IG+P D G + + + V TV L +D ++ +++S L+ ++ Sbjct: 484 DIDVRGIGLPGDADRPLGDVLDDMAERVENTVRGLRGEALEDEAVIEQAVSRTLKKASQQ 543 Query: 541 VWGKKPLVTVFINKI 555 +W ++P+V + ++ Sbjct: 544 IWDRRPIVETVVLRL 558 >gi|290581108|ref|YP_003485500.1| hypothetical protein SmuNN2025_1582 [Streptococcus mutans NN2025] gi|254998007|dbj|BAH88608.1| hypothetical protein [Streptococcus mutans NN2025] Length = 560 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 275/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 62 IVDNVDRIKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDAKM 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G +V TGD+K D + + D Sbjct: 122 YEINHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I +I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKEYHASEIMIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAIDTGIPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + R LS G + +D Sbjct: 420 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRHDLSEDGVVLAVATVDFKT 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRSSQRILFNAIRIALKNKEASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|322805614|emb|CBZ03179.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Clostridium botulinum H04402 065] Length = 538 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 182/541 (33%), Positives = 304/541 (56%), Gaps = 10/541 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG N+ + YG + ++IDCG+SFP +++ GVDLV PDIT++ Sbjct: 3 NKDSVKVIPLGGLGEIGKNITAFEYG----NEIVIIDCGISFPDEEMYGVDLVIPDITYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + AIF+TH HEDH G+L + L+ PVY + +G++E K + Sbjct: 59 LNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVENKLKEHNMLSDCELN 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AGD V++ IE +R HSI ++ ++ I +PVG I+HTGD+K+D I G V D Sbjct: 119 KVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDFKIDYTPIDGLVMDFH 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L LM DSTN R+G ISEK I + + I NAKG V+V TF+S++ R++ Sbjct: 179 RIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAKGRVIVATFASNIHRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATG 300 IID + + GRK+ G S++ + VA+D+G + + + ++ + YP EQ+ +I TG Sbjct: 239 QIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITVDEMKNYPNEQITIITTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ R + + KD I S+ IPGNE I + N L ++G VI E Sbjct: 299 SQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLISRVINELFKKGADVIYEA 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 E VHVSGH Y +LK ++ + P+ + +HGE HL H +LA++ + + Sbjct: 359 LE-EVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHVDLAMELGMERENIFSLET 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G++L + + ++ +V G DG +G ++ + RR L+ G L++ V L+ Y Sbjct: 418 GQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRRYLAQDGMLTIVVTLEKESY 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P+++ G Y + + + V + + + + + +L+ +I R + Sbjct: 478 SVIAGPDVITRGF-IYVKESEDLINEVKGIVKKELENCLENKIIEWYVLKSNIKKYCRKI 536 Query: 538 L 538 Sbjct: 537 F 537 >gi|91977340|ref|YP_569999.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] gi|91683796|gb|ABE40098.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 556 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 239/555 (43%), Positives = 359/555 (64%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PD+ F Sbjct: 3 RPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDVRF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KE+KNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L AK ER + KIP Sbjct: 63 LEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLRCPIYATKFSAALFAAKLAAERTTLKIPI 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +G ++D+G F+IE + V HSIPE+ AL IR+ G ++HTGDWK+D ++G TD+ Sbjct: 123 TEVPSGGRIDLGPFNIEFIPVAHSIPESHALAIRTSAGLVLHTGDWKIDPTPVVGPPTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + ++ ++K AKG V VTTF+S+V RI Sbjct: 183 KRLRELGDEGVLALIGDSTNAVRDGRSPSETEVGASLTGLIKAAKGRVAVTTFASNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 ++ A+ GR++VL+G ++ RV +VA + G + Q F E +G +P ++++ + TG Sbjct: 243 HAVAQAAKAAGREVVLVGRAMDRVSNVARECGYLDGIQGFRGPEYYGHFPPDKVLALCTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA+++R + + L + D VIFSSR IPGNE A+G I N LV QG+ VI + Sbjct: 303 SQGEPRAALARIARDDHPEITLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVITDR 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + VHVSGHP +L+ M W+RPQ+L+ +HGE LHL H +LA Q G+ V RNG Sbjct: 363 -DHLVHVSGHPRREELREMISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVMVCRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P II+++ G KDG ++ + + +RR+++F G V + L + Sbjct: 422 LVRLGPGDPAIIEQLPSGRLYKDGAILEEEKSRAVVERRKMAFAGCAFVTLALTQAGELV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ IGIP + G + ++ V++TV LP+ RR+D + ES+ +RS+++ Sbjct: 482 DDPEVELIGIPENNSAGEPLDDIVFDAVVSTVEGLPKARRRDPDAVAESVRRTVRSVVQT 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL V + K+ Sbjct: 542 EWGKKPLCFVHVLKV 556 >gi|313884725|ref|ZP_07818481.1| ribonuclease J 1 [Eremococcus coleocola ACS-139-V-Col8] gi|312620093|gb|EFR31526.1| ribonuclease J 1 [Eremococcus coleocola ACS-139-V-Col8] Length = 570 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 172/564 (30%), Positives = 289/564 (51%), Gaps = 14/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM YG + +++DCGV FP+DDL G+D V D + Sbjct: 5 LKNNEVGVFAVGGLEEIGKNM----YGVQFQDEIVLLDCGVLFPEDDLLGIDYVINDFQY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + + A+ I+H HEDH G + L L+VP+YA P A L+ K + + Sbjct: 61 IIENQHKVKALVISHGHEDHIGGIPFLLQQLNVPIYADPLAAALIRNKLQERGLLRDAQI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ +++ + R HSIPE +VI SPVGNIV TGD+K D + + + Sbjct: 121 TEYKEDTEINFRKLKVSFYRTTHSIPEAYGIVINSPVGNIVFTGDYKFDFTPVG-EPANL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L LM DSTNA +SE+ + ++I+ I+K+ +G V+ TF+S+VSR+ Sbjct: 180 HKMARIGEEGVLLLMGDSTNAEIPNFTMSERIVGQSIHSIIKSVQGRVIFATFASNVSRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF--LSDESFGLYPREQLIVIA 298 + +++ A + RKI + G S++ ++G I L + + YP E+LI++ Sbjct: 240 QQVVEAAVETDRKIAVFGRSMENAFKNGRELGYIDDKGLDVIIESKDINRYPTEKLIILC 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++S G R +++ DTVIFSS IPGN V++ + N L+E G VI Sbjct: 300 TGSQGEPMAALSRISNGTHRQIQIQPNDTVIFSSSPIPGNTVSVNRVINSLIEAGAEVIH 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + M + ++P+ + +HGE L +LA GI Sbjct: 360 GKLN-NIHTSGHGSQQEQLLMMRLMKPKYFMPVHGEYRMLSIQAKLAQLTGIPAENCFVQ 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +NG ML L + DG IG ++ + R+ LS G + V +D Sbjct: 419 KNGDMLALTANSARRAGHFPAQAVYVDGSGIGDVGNIVLRDRKNLSENGLVIVTATIDYK 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF--RRKDLKLLRESISSA 533 + + P+I+ G Y + + + +T+ + + R + +++R+ I Sbjct: 479 NKQLISGPDIMSRGF-IYMRESVDLINDMQQTLRSAINRGLNENGNRINERMMRDIIFDT 537 Query: 534 LRSLLKKVWGKKPLVTVFINKISR 557 ++ L + P++ + +++ Sbjct: 538 IKPFLYDRTERSPMILPVLLDVNK 561 >gi|126729577|ref|ZP_01745390.1| metallo-beta-lactamase family protein [Sagittula stellata E-37] gi|126709696|gb|EBA08749.1| metallo-beta-lactamase family protein [Sagittula stellata E-37] Length = 555 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 198/557 (35%), Positives = 308/557 (55%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M + L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSDARLIYLPLGGAGEIGMNCYVYGYGKPGEERLIVVDMGVTFPDMDGTPGVDLILPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + + A+FITHAHEDH GA+ + L VP+YA F L K V K Sbjct: 61 WLKENKNRIEAMFITHAHEDHVGAVGHTFGDLSVPIYARAFTANLARQKLAEYGVEGKSV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V VG F++ + ++HSIPE+ LVI P G ++HTGD+KLD ++G+ D Sbjct: 121 RTCSAWPETVTVGPFTVGFLPISHSIPESSGLVIDCPAGRVLHTGDFKLDTQPLVGEPWD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D + G+ AL+CDSTN SE + + ++ AK V+ TTF+S+V+R Sbjct: 181 PDLWAEVSKGGVKALVCDSTNVFNRHPGRSEVIVGPAVEKLVSEAKRMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + E+ GR I L+G +++R++ A++ G++ + +S E PRE L+++AT Sbjct: 241 VKTLAEAGERAGRSICLMGRAMRRMIEAAVETGVLSRFPSVVSPEDAAQLPRENLMILAT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ ++L E D +FSS+ IPGNE + I N+L E+GV V+ + Sbjct: 301 GSQGERRAASAQLSRGKFNGIELKEGDLFLFSSKTIPGNERDVIRIMNQLSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ + ++PQ++V +HGE HL H +LA + V NG Sbjct: 360 DSMGDYHVSGHANRPDLETVQDIVQPQIVVPMHGEHRHLREHVKLAAERRRQGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + ++ + + G DG + D + R +++ GH+ V ++LD Sbjct: 419 MMIDLTGNEPKVAEYIETGRTYLDGTVQIGALDGIVRDRIRMALNGHVVVTMILDEGDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+ + +L + V D L E + +R + Sbjct: 479 LGDPWCDLMGLAETGRSHVPLVDILEADLGQFVGRAGDKILTDDDKLEEGLRRVVRQTCQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VTV ++++S Sbjct: 539 NEIGKKPEVTVVVSRLS 555 >gi|91761981|ref|ZP_01263946.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717783|gb|EAS84433.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 551 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 201/553 (36%), Positives = 316/553 (57%), Gaps = 3/553 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL+F PLGG GEIGMNM L+ YG P KWIM+D GV+F D LPG+DL++PD FI+ Sbjct: 2 KDELLFCPLGGSGEIGMNMNLFAYGKPGEHKWIMVDIGVTFADDTLPGIDLIYPDPGFIV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ +L+ I +THAHEDH GA+ LW L ++A+PF L++ K + + Sbjct: 62 DKKDDLLGIILTHAHEDHIGAIAHLWPQLKCKIFATPFTAVLIKEKFKEKNIDVTKFLKI 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 Q V++ F IE + + HSI E L I +P G I+HTGDWK+D + ++G+ + D Sbjct: 122 VQLNGTVNLDPFKIEYITLTHSILEPNGLRIETPAGVILHTGDWKIDPEPLIGEKINSDR 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IGNEG+LA++CDSTN G SE ++K++ +IM + K +++ +F+S+V+R+ + Sbjct: 182 LKEIGNEGVLAMICDSTNVFSMGKAGSELDVRKSLLNIMGSLKKRIVMASFASNVARMET 241 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 AE+ GR+I L+G S+ R+ A G +K + RE+++ + TGSQ Sbjct: 242 AFYCAEKTGRQISLVGRSMHRIFKAARQCGYLKNVIEPVDARDAKKIAREKIVYLCTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL ++S +V + + D VIFSS+ IPGNE + ++N+LV+ GV VI+E++E Sbjct: 302 GEPMAALMRISSNTHPDVFIEKDDAVIFSSKIIPGNEKKLYKLQNQLVKDGVEVISEESE 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP +DL+ MY W++PQ V +HGE H++ H + A + + V NG ++ Sbjct: 362 F-VHVSGHPNRDDLREMYDWVKPQCAVPVHGEHRHMIEHMKFAKEMKVPHPVQVENGDIV 420 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 +L P + D+ G DG + + I R+ +S G++ V +L+ NI Sbjct: 421 KLAPGKPHVFDKAPSGRLYLDGNMSVEEDAQSIKDRKNISANGYMEVTILITAKGNIHKR 480 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P + G+P YD D + L + + T +K L +++ R K Sbjct: 481 PVLTFRGLPVYDVD--EFIYELEEAIEKTTRTFSIKSKKQEFNLIDALKITCRKCAKDFT 538 Query: 543 GKKPLVTVFINKI 555 GK+P + + + +I Sbjct: 539 GKRPFININLVRI 551 >gi|116492923|ref|YP_804658.1| mRNA degradation ribonuclease J1/J2enzyme [Pediococcus pentosaceus ATCC 25745] gi|116103073|gb|ABJ68216.1| RNase J1 [Pediococcus pentosaceus ATCC 25745] Length = 558 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 161/557 (28%), Positives = 276/557 (49%), Gaps = 10/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+ EIG N YG + I++D G+ FP+D+L G+D V PD F Sbjct: 6 IKNNETAVYAIGGLNEIGKNT----YGIQFQDEIIVVDAGIKFPEDELLGIDYVIPDYQF 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ ++ + A+ ITH HEDH G + L ++VP+YASP A L++ K + K Sbjct: 62 LVANQQKIKALVITHGHEDHIGGIPFLLQQINVPIYASPLAAALIKGKLEEHGLLKTTEI 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+T+ + + +P G IV TGD+K D + Sbjct: 122 HIIDEDTVIKFPKTSVSFFRTTHSIPDTLGVAVHTPSGVIVETGDFKFDLTPTTHQPPNL 181 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G+EG+L LM DSTNA R+ SE+ + K+I I + +G ++ TF+S++SRI Sbjct: 182 QKMAKLGDEGVLLLMSDSTNAERDEFTKSERWVGKSIRKIFEEVEGRIIFATFASNISRI 241 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S++ + ++G + D ++ E P +++++ T Sbjct: 242 QMATEAALKHGRKIAVFGRSMEAALVNGRELGYLDIPDDALINAEQLNHLPANKVLIMCT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTV+FSS IPGN +++ + N L E G RVI Sbjct: 302 GSQGEPMAALSRIANGTHRQISIQPDDTVVFSSNPIPGNTISVNKVINELEEAGARVIHG 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH ++ + M + ++P+ + IHGE L H ELA + + Sbjct: 362 KVN-NIHTSGHGGQDEQRLMLRLMQPKYFMPIHGEYRMLQLHTELAHDCDVPFENSFIMS 420 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D G DG IG ++ + R+ LS G + V ++ Sbjct: 421 NGDVLALTKDSARRSGHFSAGDVYVDGNGIGDIGNVVLRDRQLLSEEGLVVVVATINLKT 480 Query: 478 NIF-GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G Y + G++ + + + + + + +I L+ Sbjct: 481 KMIESGPDLLSRGF-VYMRESGELINEGRRRMFARIRHAMRNPHANEASINRAIIDDLQK 539 Query: 537 LLKKVWGKKPLVTVFIN 553 L + + P++ + Sbjct: 540 FLYEQTERHPVIIPMLI 556 >gi|190891302|ref|YP_001977844.1| metallo-beta-lactamase family protein [Rhizobium etli CIAT 652] gi|190696581|gb|ACE90666.1| putative metallo-beta-lactamase family protein [Rhizobium etli CIAT 652] Length = 556 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 319/555 (57%), Positives = 423/555 (76%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P Sbjct: 63 ASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKARIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGDK++VG FSIE V VNHSIPE M+L+IR+P GN++HTGDWK+D + LG +TD+ Sbjct: 123 TLFKAGDKINVGPFSIEGVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I+++A+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVILTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+ALA+LSR EMRNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 303 SQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD- 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP N+L+RMY+W RP+++V +HGE HL AHKELA Q GI+ VP VRNG Sbjct: 362 IEALVHVSGHPRRNELQRMYEWTRPKIVVPVHGEATHLTAHKELAEQSGISIVPRVRNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +LRL P P+E+I E HG KDG LIG F ++GI +R++LS+VGH++V+++LD Y+I Sbjct: 422 ILRLAPGPVEVIGEAPHGRIYKDGMLIGDFDEMGIGERKKLSYVGHVAVSIVLDARYDIV 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G P++V IG+P YD +G ++ L I+ + +P+ RRKDL +L+E++ A+R+ + Sbjct: 482 GDPDLVSIGLPVYDDEGDEMEDTLFDAAISAIESIPRARRKDLDMLQEAVRRAIRAAANQ 541 Query: 541 VWGKKPLVTVFINKI 555 WGKKP+VT F+ K+ Sbjct: 542 SWGKKPVVTAFVTKV 556 >gi|327398207|ref|YP_004339076.1| Ribocuclease J [Hippea maritima DSM 10411] gi|327180836|gb|AEA33017.1| Ribocuclease J [Hippea maritima DSM 10411] Length = 551 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 178/554 (32%), Positives = 301/554 (54%), Gaps = 11/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG+ EIG+N ++ + I++D G+ FP++D+ GVD+V PD ++I + + Sbjct: 5 VNVVALGGLDEIGLNSTVFE----TQNDMILVDAGLMFPEEDMLGVDIVIPDFSYIYENK 60 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+ +THAHEDH GA+ L ++VP+Y + +GL++AK +++ + + + Sbjct: 61 DKLRALILTHAHEDHVGAIPYLLQNINVPIYGTKLTLGLVKAKLKEFKIT-NVQFVEIEP 119 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 K +G F +E +R HSI + + I + VG I+HTGD+K+D + G D Sbjct: 120 SRKFQIGDFELEPIRTTHSIVDGVGFAITTDVGVIIHTGDFKIDQTPVDGKPFDMLKFSE 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G++G+ L+ DSTNA +G SEK IK+ DI +AKG +LV TF+S++ RI+ +++ Sbjct: 180 YGSKGVKLLLSDSTNATVKGFTGSEKEIKRGFLDIFSSAKGRILVVTFASNIHRIQQVVN 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RK+ + G S+ + ++A +G + D + + ++ + ++LI++ TGSQGE Sbjct: 240 TAIETNRKVCITGKSMVQNATIARQLGYLSIPDNVLVCEDEIAKFSDKELIIVTTGSQGE 299 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P S L++++ GE +N+K+ DTV+ S++AIPGNE AI + N L +G +V E Sbjct: 300 PMSGLSRIALGEHKNIKIKPTDTVVISAKAIPGNERAILKVINTLSRKGAKVFYEG-NSN 358 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 VHVSGH +LK M +RPQ + IHGE + H +A + GI + + NG +L Sbjct: 359 VHVSGHASQEELKLMINMVRPQYFMPIHGEYMMRRQHASIAEELGIPSRNIFTIDNGDVL 418 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIFG 481 L D ++ ++ G DG +G D+ I R +LS G + V V + + + Sbjct: 419 TLTKDNAKMEQKIRTGRVFVDGKGVGDVEDVVIRDRIKLSTDGFVVVIVTVSNTTGELLS 478 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PEI+ G+ Y+ K+ V + + D +++ I A+ L K Sbjct: 479 DPEIITKGLL-YEEKSQKLLHEATMMVKNLINQSGVDLKTDAYEIKKKIRKAMNKFLHKK 537 Query: 542 WGKKPLVTVFINKI 555 + P+V I +I Sbjct: 538 LMRNPMVLPIIMEI 551 >gi|71083598|ref|YP_266317.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062711|gb|AAZ21714.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 551 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 201/553 (36%), Positives = 316/553 (57%), Gaps = 3/553 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL+F PLGG GEIGMNM L+ YG P KWIM+D GV+F D LPG+DL++PD FI+ Sbjct: 2 KDELLFCPLGGSGEIGMNMNLFAYGKPGEHKWIMVDIGVTFADDTLPGIDLIYPDPGFIV 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ +L+ I +THAHEDH GA+ LW L ++A+PF L++ K + + Sbjct: 62 DKKDDLLGIILTHAHEDHIGAIAHLWPQLKCKIFATPFTAVLIKEKFKEKNIDVTKFLKI 121 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 Q V++ F IE + + HSI E L I +P G I+HTGDWK+D + ++G+ + D Sbjct: 122 VQLNGTVNLDPFKIEYITLTHSILEPNGLRIETPAGVILHTGDWKIDPEPLIGEKINSDR 181 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IGNEG+LA++CDSTN G SE ++K++ +IM + K +++ +F+S+V+R+ + Sbjct: 182 LKEIGNEGVLAMICDSTNVFSMGKAGSELDVRKSLLNIMGSLKKRIVMASFASNVARMET 241 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 AE+ GR+I L+G S+ R+ A G +K + RE+++ + TGSQ Sbjct: 242 AFYCAEKTGRQISLVGRSMHRIFKAARQCGYLKNVIEPIDARDAKKIAREKIVYLCTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL ++S +V + + D VIFSS+ IPGNE + ++N+LV+ GV VI+E++E Sbjct: 302 GEPMAALMRISSNTHPDVFIEKDDAVIFSSKIIPGNEKKLYKLQNQLVKDGVEVISEESE 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP +DL+ MY W++PQ V +HGE H++ H + A + + V NG ++ Sbjct: 362 F-VHVSGHPNRDDLREMYDWVKPQCAVPVHGEHRHMIEHMKFAKEMKVPHPVQVENGDIV 420 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 +L P + D+ G DG + + I R+ +S G++ V +L+ NI Sbjct: 421 KLAPGKPHVFDKAPSGRLYLDGNMSVEEDAQSIKDRKNISANGYMEVTILITAKGNIHKR 480 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P + G+P YD D + L + + T +K L +++ R K Sbjct: 481 PVLTFRGLPVYDVD--EFIYELEEAIEKTTRTFSIKSKKQEFNLIDALKITCRKCAKDFT 538 Query: 543 GKKPLVTVFINKI 555 GK+P + + + +I Sbjct: 539 GKRPFININLVRI 551 >gi|209964534|ref|YP_002297449.1| metallo-beta-lactamase, putative [Rhodospirillum centenum SW] gi|209958000|gb|ACI98636.1| metallo-beta-lactamase, putative [Rhodospirillum centenum SW] Length = 560 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 198/550 (36%), Positives = 312/550 (56%), Gaps = 6/550 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+PLGG GEIGMN+ LYG+ +W+M+D G+SF + PGV+++ PD FI + R Sbjct: 17 LYFVPLGGSGEIGMNLNLYGHA----GRWLMVDLGISFGDETTPGVEILLPDPAFIAERR 72 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L + ITHAHEDH GA+ LW L PVY +PFA +L K +S + I Sbjct: 73 EDLAGLVITHAHEDHLGAVPYLWPELRCPVYCTPFAASVLRVKLQERGLSGDVQIIEVPL 132 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + VG F +E V V HSIPE ALVIR+P G ++H+GDWKLD D ++G D+ +L Sbjct: 133 SGRFQVGPFDLELVTVTHSIPEPNALVIRTPAGTVLHSGDWKLDPDPVIGTTADEAALKR 192 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G EG+ AL+CDSTNA+ G +E ++ ++ + G + V F+++V+R+ SI Sbjct: 193 LGREGVTALVCDSTNALVPGVAGAEAAVRDSLITLFGRYTGRIAVGCFATNVARLHSIAV 252 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A+ R + L+G SL R+ + A G + F+++ G PR++ ++I TGSQGEP Sbjct: 253 AAQANDRHVALVGRSLWRIDAAARANGYLTDLPPFVTEHDAGFLPRDKCVLICTGSQGEP 312 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 R+AL++++ G+ + L D V+FS+R IPGNE I ++N L+ +G+ V+ + V Sbjct: 313 RAALSRIAGGDHPEIDLVPGDVVVFSAREIPGNEKDIAKVQNALIRRGIEVVT-ADDAFV 371 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 HVSGHP ++L +YQW+RP+ ++ +HGE HL A+ +LA Q + +G ++R+ Sbjct: 372 HVSGHPARDELTSLYQWVRPRAVIPVHGERRHLTANAQLAQQCQVGETVIPEDGAVIRIG 431 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 P P EI+ V G DG I + R ++ G VLL ++ P + Sbjct: 432 PGPAEIVGHVPSGRLCLDGRRIVPVHGGAMRSRHRMMNNGAAVATVLLTAKGDLATDPRV 491 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 +G+ + + L+ + TV +P R+D + +RE++ A+R G+K Sbjct: 492 SVMGLLDPE-ETEAAVADLVDLLRRTVETMPMPSRRDDEAVREAVRLAIRRSFNASQGRK 550 Query: 546 PLVTVFINKI 555 PL V + ++ Sbjct: 551 PLTEVHVVRL 560 >gi|114707385|ref|ZP_01440282.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506] gi|114537266|gb|EAU40393.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506] Length = 549 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 279/548 (50%), Positives = 377/548 (68%), Gaps = 1/548 (0%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 +VF+PLGG+GEIGMN+ALYGYG R+WIM+DCG+SF D+PGVDLVFPDI FI Sbjct: 1 MVFVPLGGIGEIGMNLALYGYGPEHDREWIMVDCGISFAGPDMPGVDLVFPDIRFIEDHV 60 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K L I ITHAHEDHYGAL DLW L PVYA+ F GLL AKR E + KIP F+A Sbjct: 61 KALKGIVITHAHEDHYGALLDLWPRLKAPVYATEFTAGLLAAKREGEPGAPKIPVEVFKA 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 GD+ +G F IE++ V HSIP+ +AL IR+ G ++HTGDWK+D +LG+ TD+ L Sbjct: 121 GDRFRIGPFEIEAINVTHSIPDPVALAIRTDAGTVLHTGDWKIDATPVLGEPTDEKRLRE 180 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG++ L+CDSTNAMREG SE + ++ I+ +AK V VTTFSS+V RIRS+ Sbjct: 181 IGDEGVMTLVCDSTNAMREGESPSEAEVAASLTKIIMSAKARVAVTTFSSNVGRIRSVAR 240 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GR+++L+G S++R + VA + G + FLS++ FG PR+++++I TGSQGE Sbjct: 241 AATDAGRQVLLMGRSMRRTIDVAREAGYMDDVPEFLSEQDFGHIPRDKVVIILTGSQGES 300 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 R+ALA+LSR E +V L++ D VIFSSRAIPGNE I IKN +E+GV+++ ED + V Sbjct: 301 RAALARLSRDEHPSVALSKDDMVIFSSRAIPGNEKPIIEIKNAFLERGVKIM-EDGDGLV 359 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 HVSGHP N+LK+MY+WIRPQ + HGEP HL AH +LA + G+ V RNG +++L Sbjct: 360 HVSGHPRRNELKKMYEWIRPQTAIPAHGEPAHLAAHADLARELGVKHVVEARNGHLVQLS 419 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 P +IDEV G KDG L+G D+GI +RR+LSFVG +SV + LD+ N+ P++ Sbjct: 420 PGKGAVIDEVPFGRLYKDGHLLGTAEDMGIIERRRLSFVGQVSVLIELDSKRNLKDDPDL 479 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 V IG+P D +G + LL+ V +P RRKD +RE++ A+R+ +++WGKK Sbjct: 480 VSIGLPIEDEEGEDLEDLLVDAAAGAVESIPHGRRKDPSTVREAVRRAVRNAAQEIWGKK 539 Query: 546 PLVTVFIN 553 P+ TVFI+ Sbjct: 540 PMTTVFIS 547 >gi|323489599|ref|ZP_08094826.1| hypothetical protein GPDM_09640 [Planococcus donghaensis MPA1U2] gi|323396730|gb|EGA89549.1| hypothetical protein GPDM_09640 [Planococcus donghaensis MPA1U2] Length = 555 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 163/558 (29%), Positives = 273/558 (48%), Gaps = 11/558 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KNE + +PLGGVGEIG M + ++D G+ FP+D++ GVD+V PD+TF Sbjct: 4 IKNEVIRVIPLGGVGEIGKAMYVIEI----DEDLFVVDSGLMFPEDEMLGVDIVIPDMTF 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + +F+TH HED G++ L + VPVY S I L + + K + Sbjct: 60 LVENKDRVKGVFLTHGHEDAIGSIAYLLKKIQVPVYGSKLTIALAKEHIKEQGSLKHVKF 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++ + HSIP+ + +V + G IVHTG++K D A D Sbjct: 120 FEVTNKSRMNFDKTHVTFFHTTHSIPDALGIVFHTSEGAIVHTGEFKFDQSAKGSYKPDI 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G +G+L L+ DST A R G SE + +I A+G VLV+ +SS+ RI Sbjct: 180 AKMAKLGEDGVLMLLSDSTEAERPGYTTSEIVVADHILSAFLAAEGRVLVSLYSSNFIRI 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + DIA G+K+ + G SL+ V + +G + + +S + Y +++++I T Sbjct: 240 QQVFDIAAATGKKVAVAGRSLESSYEVGLRLGYLTVDEDTVISLKDLENYRDDEVVIIVT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP AL ++ R + ++VK+ DTV+ + PG EV + N+L + G V+ Sbjct: 300 GNQGEPLEALDKMVRKQHKDVKIKPTDTVLITFTPSPGMEVPMFQTMNKLAKAGANVLTS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 VHVSGH DLK M ++P+ + I GE L+AH +LA Q G+ + Sbjct: 360 S--KKVHVSGHGSQEDLKMMLNMMKPKYFIPIQGEYKMLIAHSKLAQQVGLNKSEIFIAD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 G ++ + + V G L DG IG ++ + R+ LS G V V L+ Sbjct: 418 KGDIVEYKGGKVRMSGRVTAGNVLIDGIGIGDVGNIVLRDRKLLSQDGIFIVVVTLNRKE 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I PE++ G Y + ++ + + V V + +++ I L S Sbjct: 478 KKIASGPEMISRGF-VYVRESEELMEESTRLVRKVVEKYVTRDAFEWNNIKQEIRDTLNS 536 Query: 537 LLKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 537 YLFQQTKRRPMIIPIIME 554 >gi|116670014|ref|YP_830947.1| beta-lactamase domain-containing protein [Arthrobacter sp. FB24] gi|116610123|gb|ABK02847.1| beta-lactamase domain protein [Arthrobacter sp. FB24] Length = 563 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 291/557 (52%), Gaps = 16/557 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L +PLGG+GEIG NM ++ K +++DCGV FP++ PGVDL+ PD ++I Sbjct: 17 KDTLRIVPLGGLGEIGRNMTVFEI----DGKLLIVDCGVLFPEETQPGVDLILPDFSYIE 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ + Sbjct: 73 KRLDDIVAVVLTHGHEDHIGAVPYLLRLRADIPLVGSQLTLALIEAKLQEHRIKPITQTV 132 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G G F E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 133 T--EGQVQKFGPFECEFVAVNHSIPDALAVFLRTSGGTVLHTGDFKMDQLPLDGRITDLR 190 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G EG+ M DSTNA G +EK I + + A ++V +FSS V R++ Sbjct: 191 HFAKLGEEGVDLFMSDSTNADVPGFTTAEKEIGPTLDRLFGQASKRLIVASFSSHVHRVQ 250 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A RK+ +G S+ R +++A +G + + + ++ P ++++++TG Sbjct: 251 QVLDAAANHNRKVAFVGRSMVRNMAIAEKLGYLDVPPGILVDIKNIDNLPDNRVVLMSTG 310 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G+ R V + + DTVI +S IPGNE A+ I N L++ G VI + Sbjct: 311 SQGEPMAALSRMANGDHR-VVVGQGDTVILASSLIPGNENAVFRIINGLLKLGADVIHKG 369 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VHVSGH +L Y + P + +HGE HL+A+ ++AL+ G+ + N Sbjct: 370 -NAKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGKIALESGVPDESILLADN 428 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ L +++ +V G DG +G+ + + R+ L G +S+ ++ Sbjct: 429 GTVIDLRDHQADVVGQVEVGYVYVDGSSVGEVTEADLKDRQTLGDEGFISIITVIHRATG 488 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PEI G+ D +I + + V++ L++ + + + Sbjct: 489 KVVSGPEIHARGVAEDDSVFDEIIPKINAALEEAVLNHTDHTT---HQLQQVVRRVVGTW 545 Query: 538 LKKVWGKKPLVTVFINK 554 + + +KP++ + + Sbjct: 546 VNRKLRRKPMIIPVVLE 562 >gi|297571216|ref|YP_003696990.1| RNA-metabolising metallo-beta-lactamase [Arcanobacterium haemolyticum DSM 20595] gi|296931563|gb|ADH92371.1| RNA-metabolising metallo-beta-lactamase [Arcanobacterium haemolyticum DSM 20595] Length = 557 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 167/559 (29%), Positives = 291/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + + +PLGG+GEIG NM ++ + + +++DCGV FP++ PGVDL+ PD + Sbjct: 9 LQPDTVRIVPLGGIGEIGRNMTVFE----LNGRILIVDCGVLFPEESQPGVDLILPDFDY 64 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + I +TH HEDH GA+ L +P+ S + L+EAK R+ K Sbjct: 65 IRDRMDAIDGIVLTHGHEDHIGAVPYLLRLREDIPIIGSELTVALVEAKLAEHRI--KPF 122 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + GD +G F E V VNHSIP+ +A+ I+S G I+HTGD+K+D + G +TD Sbjct: 123 SMVVEEGDVEQIGPFECEFVAVNHSIPDALAVAIKSVAGTILHTGDFKMDQLPLDGRITD 182 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +EG+ M DSTNA G SE I + ++ + G ++V +F+S V R Sbjct: 183 LRTFARLADEGVDLFMVDSTNAEVPGFVRSEGEIGPVLENVFAQSSGQIVVASFASHVHR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+ +G S+ R + +A ++G + D + + + EQ++ ++ Sbjct: 243 VQQVLDAAAKFGRKVCFVGRSMVRNMGIAEELGYLDVPDGILVDLKKADSVAPEQIVYMS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + L++++ G +++ + DTVIF+S IPGNE ++ + N L + G RV+ Sbjct: 303 TGSQGEPMAVLSRIASGTHKSITVGPNDTVIFASSLIPGNENSVFRLINGLTKLGTRVVH 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P+ ++ +HGEP HLVA+ +A++ G+ V Sbjct: 363 QG-NAKVHVSGHSAQGELLYCYNIVEPEYVMPVHGEPRHLVANGAIAVKTGVPAENVLLA 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ + +I+ EV G DG +G+ + + R L G ++V ++D Sbjct: 422 EDGSVIDMHEGKCKIVGEVPCGHVYVDGSSVGEITEAELTDRLTLGEEGFIAVFAVVDGQ 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P I G+ D I + + + V +++++ L Sbjct: 482 KRRIIAGPHIQARGMAEDDSVFDHILPQVTQALEEAVASEGATS----YQMQQAMRRVLG 537 Query: 536 SLLKKVWGKKPLVTVFINK 554 K + P++ + + Sbjct: 538 RWAAKSLRRSPMIIPTVIE 556 >gi|119716543|ref|YP_923508.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614] gi|119537204|gb|ABL81821.1| beta-lactamase domain protein [Nocardioides sp. JS614] Length = 561 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 166/552 (30%), Positives = 284/552 (51%), Gaps = 13/552 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+G NM + Y + +++DCGV FP+D PGVDL+ PD + I Sbjct: 19 LRVIPLGGLGEVGRNMTAFEY----DGRLLLVDCGVLFPEDHHPGVDLILPDWSSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA L +P+ S + LL +K R+ ++ + Sbjct: 75 DDVEALVLTHGHEDHIGATPYLLRERGDIPLVGSELTLALLGSKLREHRL-RETVHHVVR 133 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F +E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD + Sbjct: 134 EGDRARFGPFDLEFVAVNHSIPDALAVAIRTGAGMVLHTGDFKMDQLPLDGRITDLRAFA 193 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G +EK I I + +++K ++V F+S V R++ ++ Sbjct: 194 RLGEEGVDLFLTDSTNAETPGFTPAEKAITPVIDQVFRDSKQRIIVACFASHVHRVQQVL 253 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A R++ +G S+ R + +A D+G ++ + + + P E+ ++I+TGSQG Sbjct: 254 DAAYAHERQVAYVGRSMVRNMGIARDLGYLQVPPSVLVDTKDLADLPPERQVLISTGSQG 313 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++++ V + E DTV+ +S IPGNE A+ + N L G RV+ + Sbjct: 314 EPMSALSRIAQRNHNFVHIEEGDTVLLASSLIPGNENAVYRVINGLARWGARVVHKG-NA 372 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGH +L Y ++P+ ++ +HGE H++A+ ELA + G+ V +G ++ Sbjct: 373 MVHVSGHASAGELLYCYNIVKPRNVLPVHGEIRHMLANGELARETGVENVVIAEDGVVVD 432 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGH-LSVNVLLDNHYNIFGV 482 L I +V G DG +G + + RR L G + V+ + G Sbjct: 433 LIDGVASIAGKVDCGYVFVDGSSVGDITESDLKDRRILGEEGFISVIVVVDSVSGKVAGG 492 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 PEI G + + + +I + D L++++ + + Sbjct: 493 PEIHARGFA----EDDSTFDEIKQPIIDALDLAVAEGNTDSYQLQQTVRRVVGRWVSATH 548 Query: 543 GKKPLVTVFINK 554 ++P++ + + Sbjct: 549 RRRPMIIPVVIE 560 >gi|315641416|ref|ZP_07896490.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482852|gb|EFU73374.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 567 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 272/557 (48%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG N YG + I+ID G+ FP+D+L G+D V D ++ Sbjct: 5 LKNNETGVFGIGGLGEIGKNC----YGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + +FITH HEDH G + L ++P+YA P A+ L+ K + + Sbjct: 61 IIQNLHKVKGLFITHGHEDHIGGIPFLLRQANMPIYAGPLAMALITNKLEEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 V ++ R HSIP+T+ +V+++P GNIV TGD+K D + + D Sbjct: 121 HEIHEDTIVRFRKTAVSFFRTTHSIPDTLGVVVKTPSGNIVATGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA SEK I +I I + +G ++ +F+S++ R+ Sbjct: 180 HKMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIVHIFEKIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + D A GRKI + G S++ + +G I F+ P + +++ T Sbjct: 240 QQAADAAVATGRKIAVFGRSMENAIVNGQRLGYINVPKGTFVDASELNKLPANETLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTVIFSS IPGN ++ H+ N L++ G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQIQIHPDDTVIFSSSPIPGNTTSVNHLINLLLQAGANVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + ++P+ + +HGE L H +LA G+ + Sbjct: 360 KLN-NIHTSGHGGQEEQKLMLRLMKPKFFMPVHGEFRMLKIHTKLAQATGVPRENCYILE 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG ML L D + DG +G ++ + RR LS G + +D Sbjct: 419 NGDMLALTADTARVAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIAK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I PEI+ G Y + G++ + + + + + L+E+++ AL+ Sbjct: 479 KEILSGPEILSRGF-VYMRESGEMINEGQGILFRALREALKQPDCNEHKLKEAMAGALQP 537 Query: 537 LLKKVWGKKPLVTVFIN 553 L + P++ I Sbjct: 538 FLFDQTERHPMILGMIM 554 >gi|195977429|ref|YP_002122673.1| metallo-beta-lactamase family protein, Zn-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225869242|ref|YP_002745190.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225869807|ref|YP_002745754.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|195974134|gb|ACG61660.1| metallo-beta-lactamase family protein, Zn-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699211|emb|CAW92483.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225702518|emb|CAX00454.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 560 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 165/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ E+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LRPNEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 62 IVDNLERVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAVL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ + HSIPE + +VI +P G ++ TGD+K D + D D Sbjct: 122 YEINHNTELTFKHMSVTFFKTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-DPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I +I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGKDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIYRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKHYHASEILIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN V++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTVSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAVDIGIPEENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L L D I DG IG + RR LS G + +D Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFET 479 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G++ + + + + + + ++ + +I +ALR Sbjct: 480 QMILAGPDILSRGF-IYMRESGELIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|326692414|ref|ZP_08229419.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc argentinum KCTC 3773] Length = 560 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 276/558 (49%), Gaps = 11/558 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+D+L G+D V PD T+ Sbjct: 7 IKPNEVGVYALGGLGEIGKNTYGIEY----QDEIIVVDAGIKFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQLLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGTVLEFDKLSVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 S+ +G +G+L +M DSTNA R SE + K++ I K KG ++ TF+S+++R Sbjct: 183 WSMARLGEKGVLLMMSDSTNAERPEWTKSEAWVAKSVNRIFDKITKGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P E+L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVNNGRALGYLNIPDDMLVEQSEIKHIPDEELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L D VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPNDNVIFSSSPIPGNTASVNEVINKLEEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + I + Sbjct: 363 GKVN-NIHTSGHGGQEEEKLMLALMKPKYFMPVHGEYRMLKVHASLAHELDIPEDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + I DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGENARIAGHFPGEDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + + T+ + +R+++ L Sbjct: 482 KKEILSGPDILSRGF-VYMRESGDLINEGRRIIFGTMRRVMNNANATEADIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFIN 553 L + +KP++ + Sbjct: 541 RFLYRETARKPMILPMLI 558 >gi|154686095|ref|YP_001421256.1| YmfA [Bacillus amyloliquefaciens FZB42] gi|154351946|gb|ABS74025.1| YmfA [Bacillus amyloliquefaciens FZB42] Length = 555 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 161/562 (28%), Positives = 293/562 (52%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 57 ISYLVERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + + + HSIP+++ + ++ +G+IV TGD+K D Sbjct: 117 ADLREVHSKSVITFESTKVSFFKTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPAYHQS 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA R G SE + I D M N++ V++ F+S++ Sbjct: 177 CDIGEIAKIGNSGVLALLSDSANAERPGYTPSEAYVSGEIADAMNNSENRVIIAVFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI+ +I A Q GRK+ + G +L+ V+ + +G I+ +D++F+ + YP+ ++ + Sbjct: 237 NRIQQVIQAAVQNGRKLAIAGKNLQNVLQLGRKLGYIEAEDEMFIPVQDVKKYPKREVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + GS GEP +AL ++++ + + + E DTV+ +S IPG+E+ N L G +V Sbjct: 297 VTAGSHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELIYSKTVNLLARAGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH ++A + + + Sbjct: 357 IF--AQKRVHVSGHGSQEELKLMLNLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIEKGDVVEFRGQNVKIGDKVTYGNVLIDGLGVGDIGNIVLRDRRLLSQDGILIVVISLD 474 Query: 475 N-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 N+ PEI+ G Y + + + V + V + + + L++++ A Sbjct: 475 KQKKNLVSGPEIITRGF-VYVRESEGLIVQATELVRSIVTEATETSAVEWSTLKQAMRDA 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|298291831|ref|YP_003693770.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] gi|296928342|gb|ADH89151.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] Length = 562 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 242/563 (42%), Positives = 361/563 (64%), Gaps = 9/563 (1%) Query: 1 MKN--EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M +ELVF PLGGVGEIGMN+ LYGYG + RKW+ +D G+SF ++PG+D++ PD+ Sbjct: 1 MSKWPDELVFAPLGGVGEIGMNLGLYGYGPRNRRKWLAVDLGISFAPPEVPGIDIIMPDV 60 Query: 59 TFIMKERK--NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 +F+ E + NL + ITH HEDH G L DLW L PVY +PF L EA+R+ E + Sbjct: 61 SFLAHEAEHGNLAGLIITHGHEDHVGGLVDLWPRLGCPVYTTPFTAALAEARRLGEPGAP 120 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 KIP +G + +G F +E V V HSIP++ AL IR+P+G +VHTGDWK+D ++G+ Sbjct: 121 KIPFHVVPSGGRAKIGPFEVEFVPVAHSIPDSHALAIRTPLGLVVHTGDWKIDPTPVVGN 180 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 VTD A+G+EG+ A++CDSTNA REG SE +++ + +++ A V VTTF+S+ Sbjct: 181 VTDPARFTALGDEGVRAVVCDSTNAFREGISPSETDVQQVLAELIAAAPYRVAVTTFASN 240 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 V+R+RSI + A + GR++VL+G +++RVV+VA + ++ F +++G PR++++ Sbjct: 241 VARVRSIAEAAIKAGREVVLVGRAMERVVTVAREQHLLDGLPPFRPVDAYGFLPRDKVVA 300 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TGSQGEPR+ALA+++ + + L+ D VIFSSR IPGNE A+ I N LV QGV++ Sbjct: 301 ILTGSQGEPRAALARIADDDHPEIALSPGDQVIFSSRTIPGNERAVNRIINALVLQGVKI 360 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 I + + VHVSGHP +L++MYQW+RPQV V +HGEPLHL H +LA + G V + Sbjct: 361 ITDR-DALVHVSGHPRRGELEQMYQWLRPQVAVPVHGEPLHLSEHADLARRMGAREVIRL 419 Query: 417 RNGKMLRLFPD----PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 +G M+RL E+I+EV G KDG ++ D +A+RR++SF G +SV + Sbjct: 420 VDGDMVRLISSDPALGAEVIEEVPAGRLYKDGQVLVSSDDPAVAERRRMSFSGLISVAIA 479 Query: 473 LDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + + G P I G+P G + +++ + V+ + LP+ RR+D + ES++ Sbjct: 480 MTEKGEVVGDPMIDLSGLPRLGLGGKPLDEVVEEAVLDCLDGLPKPRRRDPDAVSESVTR 539 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 A+RS + WGKKPL V + + Sbjct: 540 AVRSSVNAAWGKKPLCHVLVITV 562 >gi|126727174|ref|ZP_01743011.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2150] gi|126703602|gb|EBA02698.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2150] Length = 557 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 205/559 (36%), Positives = 308/559 (55%), Gaps = 3/559 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 MKNE L++LPLGG GEIGMN +YGYG P ++I++D GV+FP D PGVDL+FPD+T Sbjct: 1 MKNERLIYLPLGGAGEIGMNAYVYGYGKPGKERFILVDIGVTFPDMDTTPGVDLIFPDMT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L AIFITHAHEDH GA+ ++ P+Y F + K + Sbjct: 61 WLEDNADRLEAIFITHAHEDHIGAVGHTFNKFQTPIYTRKFTGAIARRKLSEHGIGADAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + V VG F + + V+HSIPE +VI +P G IVHTGD+KLD+ LG+ D Sbjct: 121 TIMGAWPETVSVGPFEVGFMPVSHSIPEASGMVIDTPKGRIVHTGDFKLDETPGLGEPFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + AI G+ AL+CDSTN SE + I +++ + G V+ TTF+S+++R Sbjct: 181 ETAWSAIAAGGVKALVCDSTNIFSPEAGRSESSVGPAIEELVASCSGMVVATTFASNIAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 +R++ + GR IVLLG ++ R+VS I+ G++ +S + PRE L+++ T Sbjct: 241 VRTLANAGVAAGRSIVLLGRAMDRMVSAGIEAGVVTDFPPTISADDARELPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ R +K+ + DT +FSS+ IPGNE + I N E GV VI + Sbjct: 301 GSQGERRAASAQLSRGKYRGLKVRDGDTFLFSSKTIPGNENGVARIINAYSEMGVDVIDD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 A HVSGH DL R++Q ++P++++ +HGE HL H ++A G A + NG Sbjct: 361 YA-GRYHVSGHANGPDLARVHQIMQPEMIIPMHGEHRHLRTHMKMANANGFASI-IAPNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L EI++ V DG D + R +++ G + V V++D +I Sbjct: 419 AMVDLSGSEPEIVEYVDASRIYIDGNKHIGATDGIVRDRIRMALNGIVVVGVIIDEDDDI 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G G+ G + + + V + + D + E++ A+R + Sbjct: 479 TGDAWAEVKGLAETGKSNGPLVEEIEDAVNDLLSRAKRRVISDDDAIEEAVRRAVRHVSN 538 Query: 540 KVWGKKPLVTVFINKISRQ 558 + GKKP V V I+++ Q Sbjct: 539 EQIGKKPEVIVLISRMVAQ 557 >gi|306818232|ref|ZP_07451962.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239] gi|304648971|gb|EFM46266.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239] Length = 564 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 167/558 (29%), Positives = 292/558 (52%), Gaps = 15/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L +PLGG+GE+G NM + + K ++IDCGV FP++ PGVDL+ PD ++I Sbjct: 15 RPDVLRLVPLGGLGEVGRNMMVLE----TEGKILIIDCGVLFPEEIQPGVDLILPDFSYI 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +TH HEDH GA+ +PVY S + L+E K R+ Sbjct: 71 KDRINQVVGMVLTHGHEDHIGAVPYFLKHRSDIPVYGSGLTLALVEPKLQEHRL-PVTNL 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++D+G F +E VNHSIP+ +A+++R+ G+ + TGD+K+D + G +TD Sbjct: 130 RVKTEGQRLDLGPFHLEFCAVNHSIPDALAVMVRTKAGSALVTGDFKMDQLPLDGRITDL 189 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G EG+ DSTNA G SE+ I + D+ A G ++V +F+S V R+ Sbjct: 190 RAFARWGEEGVDLFCADSTNAEVPGFIPSEREIGPVLDDVFYRATGQIVVASFASHVHRV 249 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIAT 299 + +++ A R++ L+G S+ R + +A D G ++ + P E+ + +AT Sbjct: 250 QQVLNAAAASNRRVALVGRSMVRNMEIAADKGFLQVPGEVLIDLNDVNSLPPERRVYMAT 309 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ E R++ + E DTV+ +S IPGNE+++G + NRL+ G RVI + Sbjct: 310 GSQGEPMAALSRIANQEHRSISIGEGDTVVLASSLIPGNEMSVGRVINRLMRLGARVIHK 369 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L Y ++P+ ++ IHGE HLVA+ LA++ G+ V Sbjct: 370 G-NSKVHVSGHAAAGELLYAYNIVKPKNVMPIHGEIRHLVANGGLAVKTGVKSQNVMLAE 428 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G + + EI+ +V DG IG+ + + RR L+ G ++V V+++ Sbjct: 429 DGVCVEVKKGRAEIVGQVPCDYVYVDGTSIGELGEQELYDRRVLAEEGFVAVYVVMELTT 488 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P ++ G+ + + + + + +V+ + ++ + L Sbjct: 489 GTILAGPTVIARGVA----ENAAVFRDIEPQIADALVEAASGGKSTVRDMERVARRTLGR 544 Query: 537 LLKKVWGKKPLVTVFINK 554 + K + P++ + + Sbjct: 545 WVSKRLRRAPMIVPLVVE 562 >gi|260578904|ref|ZP_05846808.1| ribonuclease J (RNase J) [Corynebacterium jeikeium ATCC 43734] gi|258602956|gb|EEW16229.1| ribonuclease J (RNase J) [Corynebacterium jeikeium ATCC 43734] Length = 582 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 173/556 (31%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGG+ EIG NM ++ Y + ++IDCGV FP PGVDL+ PD +++ Sbjct: 18 KGSLRIVALGGISEIGRNMTVFEY----EGRLLIIDCGVLFPSSGEPGVDLILPDFSYLE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ ITH HEDH GA+ L +P+ AS F L+ AK R K+ I Sbjct: 74 DKWDRVEALVITHGHEDHIGAIPWLLKQRADIPIIASRFTCALISAKTQEHRQRPKL--I 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G F + VNHSIP+ + + +++ G +VHTGD KLD + G TD Sbjct: 132 EVDENSHESRGPFDLRFFAVNHSIPDCLGIALKTGAGLLVHTGDIKLDQTPLDGRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ +CDSTNA G SE I + ++++AK V++ +F+S+VSR++ Sbjct: 192 ALSRFGDEGVDLFLCDSTNATTPGVSGSEAEIAPTLKRLVRDAKQRVIIASFASNVSRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 S +D A RK+ G S+ R + +A +G + +S + ++++I TG Sbjct: 252 SAVDAAVAANRKVAFNGRSMIRNMEIAERMGYLNVPRGTIVSMDEASKMAPHKVVLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G VI Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLSQIGATVITGR 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +P +N Sbjct: 372 -DAKVHTSGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVNPNNIPLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L +++ ++ G DG +G + R +S G +S+ ++DN Sbjct: 431 GVVVDLHNGHAKVVGQITVGNLYVDGTRMGDIDSGVLEDRTTMSEGGLISITTVIDNRTG 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 VP + G D + K + + V ++DL D + ++I + L Sbjct: 491 RPLEVPSVQAKGFS---DDARDMLKEIQEKVDNIMIDLAGEGENDPYRMAQAIRRKVGKL 547 Query: 538 LKKVWGKKPLVTVFIN 553 + W +KP++ + Sbjct: 548 ISDKWNRKPMIVPTVV 563 >gi|269976490|ref|ZP_06183475.1| ribonuclease J [Mobiluncus mulieris 28-1] gi|307701733|ref|ZP_07638747.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16] gi|269935291|gb|EEZ91840.1| ribonuclease J [Mobiluncus mulieris 28-1] gi|307612991|gb|EFN92246.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16] Length = 564 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 293/558 (52%), Gaps = 15/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L +PLGG+GE+G NM + + K ++IDCGV FP++ PGVDL+ PD ++I Sbjct: 15 RPDVLRLVPLGGLGEVGRNMMVLE----TEGKILIIDCGVLFPEEIQPGVDLILPDFSYI 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +TH HEDH GA+ L +PVY S + L+E K R+ Sbjct: 71 KGRINQVVGMVLTHGHEDHIGAVPYLLKHRSDIPVYGSGLTLALVEPKLQEHRL-PVTNL 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++D+G F +E VNHSIP+ +A+++R+ G+ + TGD+K+D + G +TD Sbjct: 130 RVKTEGQRLDLGPFHLEFCAVNHSIPDALAVMVRTKAGSALVTGDFKMDQLPLDGRITDL 189 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G EG+ DSTNA G SE+ I + D+ A G ++V +F+S V R+ Sbjct: 190 RAFARWGEEGVDLFCADSTNAEVPGFIPSEREIGPVLDDVFYRATGQIVVASFASHVHRV 249 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIAT 299 + +++ A R++ L+G S+ R + +A D G ++ + P E+ + +AT Sbjct: 250 QQVLNAAAASNRRVALVGRSMVRNMEIAADKGFLQVPGEVLIDLNDVNSLPPERRVYMAT 309 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ E R++ + E DTV+ +S IPGNE+++G + NRL+ G RVI + Sbjct: 310 GSQGEPMAALSRIANQEHRSISIGEGDTVVLASSLIPGNEMSVGRVINRLMRLGARVIHK 369 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L Y ++P+ ++ IHGE HLVA+ LA++ G+ V Sbjct: 370 G-NSKVHVSGHAAAGELLYAYNIVKPKNVMPIHGEIRHLVANGGLAVKTGVKSQNVMLAE 428 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G + + EI+ +V DG IG+ + + RR L+ G ++V V+++ Sbjct: 429 DGVCVEVKKGRAEIVGQVPCDYVYVDGTSIGELGEQELYDRRVLAEEGFVAVYVVMELTT 488 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P ++ G+ + + + + + +V+ + ++ + L Sbjct: 489 GTILAGPTVIARGVA----ENAAVFRDIEPQIADALVEAASGGKSTVRDMERVARRTLGR 544 Query: 537 LLKKVWGKKPLVTVFINK 554 + K + P++ + + Sbjct: 545 WVSKRLRRAPMIVPLVVE 562 >gi|257467384|ref|ZP_05631695.1| metal dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|315918514|ref|ZP_07914754.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|313692389|gb|EFS29224.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 614 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 293/562 (52%), Gaps = 14/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +++ +PLGG+ E+G NM + Y + I++D G FP + LPGVDLV PD TF+ Sbjct: 59 KEDKMFVIPLGGLEEVGKNMTVLQY----KDEIIVVDVGAIFPDESLPGVDLVIPDFTFL 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-I 118 ++ + +FITHAHEDH GA+ L+ + +P+Y + +++K +SKK Sbjct: 115 ENNKEKIKGVFITHAHEDHIGAIPYLYEKIGKDIPIYGGKLTMAFVKSKFDNVGLSKKLP 174 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 KV VG F++E V+V HSI ++ ++ I++P G++ HTGD+K+D + GD Sbjct: 175 KMKEVTGRTKVKVGKYFTVEFVKVTHSITDSYSVSIKTPAGHVFHTGDFKIDLTPVDGDG 234 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L +G+EG+ L+ DSTN+ EG SEK + + AKG +++ F+S + Sbjct: 235 VDFARLAELGDEGVDLLLSDSTNSEVEGFTPSEKSVGEAFKQEFMKAKGRIIIAVFASHI 294 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ IIDIA + RKI + G SL +V +A VG + + +S ++++ Sbjct: 295 HRIQQIIDIAVKNHRKIAIDGRSLVKVFEIAPSVGCLNIPEGALVSLAEVDKLKDHKVVI 354 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A N L+ V Sbjct: 355 LCTGTQGEPMAALSRIAKNMHKHIKVKEGDTVIISATPIPGNEKAASSNINNLLRFDAEV 414 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + + +HVSGH + K M I+P+ + +HGE L AH + A++ G+ + Sbjct: 415 VFKKI-AGIHVSGHGSKEEQKLMLNLIKPKHFMPVHGELRMLKAHMKTAMETGVSKNDIL 473 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NG + + + ++I +V G L DG IG I R+QLS G + V ++ Sbjct: 474 ITQNGNKVEVTKNYVKINGKVTAGETLVDGLGIGDIGSAVIKDRQQLSQDGIVVVAYTIE 533 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI G Y D ++ K + T + ++ K+ LL+ ++ Sbjct: 534 RKTGKIIAGPEIATRGF-VYMKDAEELIKEASDLLETKIPFSEKYLPKEWGLLKNNVKDC 592 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + P++ I +I Sbjct: 593 AAKFFYNKTKRNPMILPIITEI 614 >gi|257453140|ref|ZP_05618439.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|317059675|ref|ZP_07924160.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313685351|gb|EFS22186.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] Length = 614 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 177/562 (31%), Positives = 293/562 (52%), Gaps = 14/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +++ +PLGG+ E+G NM + Y + I++D G FP + LPGVDLV PD TF+ Sbjct: 59 KEDKMFVIPLGGLEEVGKNMTVLQY----KDEIIVVDVGAIFPDESLPGVDLVIPDFTFL 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-I 118 ++ + +FITHAHEDH GA+ L+ + +P+Y + +++K +SKK Sbjct: 115 ENNKEKIKGVFITHAHEDHIGAIPYLYEKIGKDIPIYGGKLTMAFVKSKFDNVGLSKKLP 174 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 KV VG F++E V+V HSI ++ ++ I++P G++ HTGD+K+D + GD Sbjct: 175 KMKEVTGRTKVKVGKYFTVEFVKVTHSITDSYSVSIKTPAGHVFHTGDFKIDLTPVDGDG 234 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L +G+EG+ L+ DSTN+ EG SEK + + AKG +++ F+S + Sbjct: 235 VDFARLAELGDEGVDLLLSDSTNSEVEGFTPSEKSVGEAFKQEFMKAKGRIIIAVFASHI 294 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ IIDIA + RKI + G SL +V +A VG + + +S ++++ Sbjct: 295 HRIQQIIDIAVKNHRKIAIDGRSLVKVFEIAPSVGCLNIPEGALVSLAEVDKLKDHKVVI 354 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG+QGEP +AL+++++ +++K+ E DTVI S+ IPGNE A N L+ V Sbjct: 355 LCTGTQGEPMAALSRIAKNMHKHIKVKEGDTVIISATPIPGNEKAASSNINNLLRFDAEV 414 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + + +HVSGH + K M I+P+ + +HGE L AH + A++ G+ + Sbjct: 415 VFKKI-AGIHVSGHGSKEEQKLMLNLIKPKHFMPVHGELRMLKAHMKTAMETGVSKNDIL 473 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NG + + + ++I +V G L DG IG I R+QLS G + V ++ Sbjct: 474 ITQNGNKVEVTKNYVKINGKVTAGETLVDGLGIGDIGSAVIKDRQQLSQDGIVVVAYTIE 533 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI G Y D ++ K + T + ++ K+ LL+ ++ Sbjct: 534 RKTGKIIAGPEIATRGF-VYMKDAEELIKEASDLLETKIPFSEKYLPKEWGLLKNNVKDC 592 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + P++ I +I Sbjct: 593 AAKFFYNKTKRNPMILPIITEI 614 >gi|300933059|ref|ZP_07148315.1| ribonuclease J [Corynebacterium resistens DSM 45100] Length = 750 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 283/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGG+ EIG NM ++ Y + + ++IDCGV FP PGVDL+ PD ++ Sbjct: 186 KNGLRIVALGGISEIGRNMTVFEY----NNRLLIIDCGVLFPSSGEPGVDLILPDFGYLE 241 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+ AS F L+ AK R K+ I Sbjct: 242 DKWDRVEALVVTHGHEDHIGAIPWLLKQRADIPIIASRFTCALISAKCQEHRQRPKL--I 299 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G F + VNHSIPE + + +++ G +VHTGD KLD + G TD Sbjct: 300 EVNEDSHESRGPFDLRFFAVNHSIPECLGIALKTGAGLVVHTGDIKLDQTPLDGRPTDLP 359 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EGI +CDSTNA G SE I + ++++AK V++ +F+S+VSR++ Sbjct: 360 ALSRFGDEGIDLFLCDSTNAATPGVSGSEADIAPTLKRLVRDAKQRVIIASFASNVSRVQ 419 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 S +D A GRK+ G S+ R + +A +G + F++ + +++++ TG Sbjct: 420 SAVDAAVAAGRKVAFNGRSMIRNMEIAERMGYLNAPRGTFVTMDEASKMAPHKVVLVTTG 479 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 480 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLSQIGATVVTGR 539 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH + +L +Y RP+ + +HGE HL A+++LA+ G+ +P +N Sbjct: 540 -DAKVHTSGHGFAGELLFLYNAARPRNAMPVHGEWRHLRANRDLAISTGVNANNIPIAQN 598 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + L +++ ++ G DG +G + R ++ G +S+ V++DN Sbjct: 599 GVFVDLVNGHAKVVGQMTVGNLYVDGVRMGDIDTEVLEDRTAMAEGGLVSITVVIDNRTG 658 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P + G D + + + V T++D+ D + +SI + L Sbjct: 659 RPLEAPSVQTKGFS---DDARDMIGEIRECVDNTMMDMAGAGENDPYRMAQSIRRKVGKL 715 Query: 538 LKKVWGKKPLVTVFIN 553 + W + P + + Sbjct: 716 ISDKWKRTPFIVPTVV 731 >gi|213964503|ref|ZP_03392703.1| ribonuclease J [Corynebacterium amycolatum SK46] gi|213952696|gb|EEB64078.1| ribonuclease J [Corynebacterium amycolatum SK46] Length = 693 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 289/561 (51%), Gaps = 15/561 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L + LGG+ EIG NM + Y + I++DCGV FP D PGVDL+ PD +++ Sbjct: 126 KDGLRVVALGGISEIGRNMTVLEY----KNRLIIVDCGVLFPSSDEPGVDLILPDFSYME 181 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+ AS F + L++AK R K+ I Sbjct: 182 DKWDRVEALVVTHGHEDHIGAIPWLLKQRADIPIIASRFTLALIQAKTQEHRQRPKV--I 239 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G F + VNHSIPE + +VI++ G +VHTGD K+D G TD Sbjct: 240 EVNDTSHIQRGPFDLRFFNVNHSIPECLGIVIKTGAGMVVHTGDVKMDQTPPDGKPTDLP 299 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EGI +C+STNA G SE + + ++ +AK V+V F+S+V R++ Sbjct: 300 ALSRYGDEGIDLFLCESTNATIPGFSGSEAELAPTLRRLIMDAKQRVIVAAFASNVYRVQ 359 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++ID A + GRK+ G S+ R + +A ++G++ + + +++++ TG Sbjct: 360 AVIDAAVKAGRKVAFNGRSMIRNMRIAQELGLLTAPENTIVEMNEAARMAPHKVVLVTTG 419 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G VI Sbjct: 420 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVITGK 479 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH + +L +Y RP ++ IHGE H+ A+KELA+ G+ V +N Sbjct: 480 -DAKVHTSGHGFAGELLFLYNAARPSNVMPIHGEWRHIRANKELAVSTGVKPENVVLAQN 538 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L ++ +V G DG +G +A R ++ G ++V ++DN Sbjct: 539 GVVVDLVDGRARVVGQVPVGNLYVDGVTMGDVDADVLADRAEMREGGLITVTAVIDNRTG 598 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P G Y D ++ + + + V T+ DL + + + + + Sbjct: 599 RPLEKPRAQARG---YSDDAKEVLETVEQVVDDTLFDLAGSGENNPYRMAQEVRRRTERV 655 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 + + W + P++ I +S + Sbjct: 656 INQKWRRSPMIVPTIVPMSSE 676 >gi|54025838|ref|YP_120080.1| hypothetical protein nfa38680 [Nocardia farcinica IFM 10152] gi|54017346|dbj|BAD58716.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 693 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 284/558 (50%), Gaps = 16/558 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L LGG+GEIG NM ++ YG K +++DCGV FP+D PGVDL+ PD Sbjct: 145 LPKNGLRVFALGGIGEIGRNMTVFEYG----GKLLIVDCGVLFPEDQQPGVDLILPDFRP 200 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++AI +TH HEDH GA+ L +PV + F + L+ AK R+ K+ Sbjct: 201 IEDRMDDIVAIVLTHGHEDHIGAVPFLLRNRSDIPVLGAKFTLALVAAKCREHRLHPKL- 259 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I G+ G F E VNHSIP+ +A+ IR+P G +HTGD KLD + G +TD Sbjct: 260 -IEVTEGETTSHGPFECEYFAVNHSIPDALAVAIRTPAGVALHTGDIKLDQLPLDGRLTD 318 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G+EG+ + DSTNA G E+ I + ++ A+G V+V +F+S V R Sbjct: 319 LAGFSRLGDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDTVIGKARGRVIVASFASHVHR 378 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ ++D+A++ GR++ +G S+ R + +A D+G + D + + + P ++L++I+ Sbjct: 379 IQQVVDVAQKYGRRVCFVGRSMVRNMQIAQDLGYLTVPDGVVVDLDVAATLPGDRLVLIS 438 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++RG+ R + + D V+ +S IPGNE ++ + N L G VI Sbjct: 439 TGSQGEPLSALSRMARGDHRQINIRPDDLVVLASSLIPGNENSVFAVVNGLARLGASVIT 498 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L +Y +RP + +HGE HL A+ LA+ G+ V Sbjct: 499 QQ-NAKVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAVATGVPEERVVLA 557 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L I+ V G DG +G + ++ R L G +S+ V +D Sbjct: 558 EDGVVVDLVDGIASIVGRVPVGHVYVDGLSVGDVGESTLSDRLVLGEGGFISITVAIDET 617 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 PE+ G D + V ++ L D + + + + Sbjct: 618 TGKAVSAPELSGRGFS----DDPTALAEAAELVEAELLRLAGEGITDTHRIAQGVRRVVG 673 Query: 536 SLLKKVWGKKPLVTVFIN 553 + + ++P++ + Sbjct: 674 RWVADTYRRRPMIVPTVI 691 >gi|24378865|ref|NP_720820.1| hypothetical protein SMU.368c [Streptococcus mutans UA159] gi|24376744|gb|AAN58126.1|AE014884_4 conserved hypothetical protein [Streptococcus mutans UA159] Length = 560 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 274/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +P+YA P A+ L+ K + + Sbjct: 62 IVDNVDRIKALVITHGHEDHIGGIPFLLKQASIPIYAGPLALALIRGKLEEHGLLRDAKM 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ S+ R HSIPE + +VI +P G +V TGD+K D + + D Sbjct: 122 YEINHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFDWTPVG-EPADI 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I +I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ Y +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKEYHASEIMIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KVN-NIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAIDTGIPKDNIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D DG IG + R LS G + +D Sbjct: 420 NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRHDLSEDGVVLAVATVDFKT 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRSSQRILFNAIRIALKNKEASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ I Sbjct: 539 FLYEKTEREPIIIPMIL 555 >gi|220912224|ref|YP_002487533.1| beta-lactamase [Arthrobacter chlorophenolicus A6] gi|219859102|gb|ACL39444.1| beta-lactamase domain protein [Arthrobacter chlorophenolicus A6] Length = 563 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 169/559 (30%), Positives = 291/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L +PLGG+GEIG NM ++ G K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 15 LPQDTLRIVPLGGLGEIGRNMTVFEIG----GKLLIVDCGVLFPEETQPGVDLILPDFSY 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++A+ +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 71 IENRLADIVAVVLTHGHEDHIGAVPYLLRLRNDIPLVGSQLTLALIEAKLQEHRIRPYTL 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G G F E V VNHSIP+ +A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 131 TVE--EGQVEKFGPFECEFVAVNHSIPDALAVFLRTAGGTVLHTGDFKMDQLPLDGRITD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ M DSTNA G +EK I + + A ++V +FSS V R Sbjct: 189 LRHFAKLGEEGVDLFMSDSTNADVPGFTTAEKEIGPTLERLFGQATKRIIVASFSSHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + RK+ +G S+ R +++A +G + L + ++ P ++++++ Sbjct: 249 VQQVLDAAAKHNRKVAFVGRSMVRNMAIAEKLGYLDVPAGLIVDIKNIDNLPDNRVVLMS 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ R V + + DTVI +S IPGNE A+ I N L++ G VI Sbjct: 309 TGSQGEPMAALSRMANGDHR-VVVGDGDTVILASSLIPGNENAVFRIINGLLKLGADVIH 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P + +HGE HL+A+ ++A++ G+ V Sbjct: 368 KG-NAKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLLANGKIAIESGVPEASVILS 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG ++ L +++ +V G DG +G+ D + RR L G +S+ ++ Sbjct: 427 DNGTVIDLRDHRADVVGQVEVGFVYVDGSSVGEITDADLKDRRILGDEGFISIITVIHRA 486 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI G+ D I + + V++ L++ + + Sbjct: 487 TGKVVSGPEIHARGVAEDDSVFDDIIPKINAALEEAVLNNKDHTS---HQLQQVVRRVVG 543 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + +KP++ + + Sbjct: 544 TWVNRKLRRKPMIIPVVLE 562 >gi|296330893|ref|ZP_06873368.1| ribonuclease J2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674411|ref|YP_003866083.1| ribonuclease J2 [Bacillus subtilis subsp. spizizenii str. W23] gi|296151898|gb|EFG92772.1| ribonuclease J2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412655|gb|ADM37774.1| ribonuclease J2 [Bacillus subtilis subsp. spizizenii str. W23] Length = 555 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 292/562 (51%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 57 ISYLIERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + + R HSIP+++ + +++ +G+IV TGD+K D L Sbjct: 117 TDLREIHSKSVITFESTKVSFFRTIHSIPDSVGVSLKTSLGSIVCTGDFKFDQTPALNQT 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA R G SE + I D + N+ V++ F+S++ Sbjct: 177 CDIGEIAKIGNSGVLALLSDSANAERPGYTPSEAAVSGEISDALYNSVNRVIIAVFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI+ +I A Q GRKI + G +L+ V+ +A +G I+ D+LF+S + YP+ ++ + Sbjct: 237 NRIQQVIHAAAQNGRKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I GSQGEP +AL +++ + + + E DTV+ +S IPG E+ + L G +V Sbjct: 297 ITAGSQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLARAGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH +A + + + Sbjct: 357 IF--AQKRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHSRIAEEIGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIEKGDVVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEI+ G Y + + + V + V + + + L++++ A Sbjct: 475 KQKKHLVSGPEIITRGF-VYVRESEGLIVQATELVRSIVTEATETSNVEWSTLKQAMRDA 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|77414543|ref|ZP_00790688.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77159415|gb|EAO70581.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] Length = 559 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 276/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIDGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|83942649|ref|ZP_00955110.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] gi|83953890|ref|ZP_00962611.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] gi|83841835|gb|EAP81004.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] gi|83846742|gb|EAP84618.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] Length = 555 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 188/557 (33%), Positives = 308/557 (55%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGKPGKERLIVVDLGVAFPDMDTSPGVDLIIPDIA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R + AIFITHAHEDH GA+ + L P+Y F + + K Sbjct: 61 WLEERRDQIEAIFITHAHEDHIGAVAHTYDRLRAPIYTRKFTANIAKRKMDEYGHPDDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + VG F + + ++HSIPE+ +LVI ++H+GD+K+D +G+ D Sbjct: 121 TTVAPWPQQTTVGPFKVGFLPMSHSIPESSSLVIDVAGDRLIHSGDFKIDMTPGVGEPYD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +G+ AL+CDSTN + SE + I ++ A+G V+ TTF+S+V+R Sbjct: 181 PELWADVSKDGVKALICDSTNVFSQHAGRSEATVGPEIEKLLGTAQGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ D E+ GR +VLLG ++KR+V +++ G++K +S E PRE L+++ T Sbjct: 241 VKTLADAGERAGRSVVLLGRAMKRMVEASLETGVMKDFPPVVSPEEARGIPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ +++ E D +FSS+ IPGNE + + N E GV ++ + Sbjct: 301 GSQGERRAASAQLARGKYMGLEMKEGDMFLFSSKTIPGNERGVIKVINAFSEMGVDIV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ ++ ++PQ+L+ +HGE HL H ++A +G+ V NG Sbjct: 360 DSSGLYHVSGHANRPDLETLHDVVKPQILIPMHGEHRHLREHTKIANAKGMKGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + ++++ V G DG D + R +++ GH++V V+LD + Sbjct: 419 MMIDLSGNEPKVVEYVDSGRTYLDGSTQIGAMDGVVRDRIRMALNGHVTVTVILDENDEA 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + +G+P + +L + + +D L + + +R Sbjct: 479 LGDPWVDAMGLPEQGRSKTSLVDVLEADLAQFLGRANAKTLRDDDKLHDGLKRTVRQSAN 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VT+ ++++S Sbjct: 539 DEIGKKPEVTIVVSRLS 555 >gi|83952323|ref|ZP_00961055.1| metallo-beta-lactamase family protein [Roseovarius nubinhibens ISM] gi|83837329|gb|EAP76626.1| metallo-beta-lactamase family protein [Roseovarius nubinhibens ISM] Length = 555 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 200/557 (35%), Positives = 305/557 (54%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M ++ L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSSDRLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVTFPDMDTTPGVDLIMPDIA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ K R L A+FITHAHEDH GA+ L+ L PVYA F + K + Sbjct: 61 WLAKNRDRLEAVFITHAHEDHVGAVAHLYDRLGAPVYARAFTANIARRKMGEHGHPDEAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + G F + V ++HSIPE+ LVI +P G IVH+GD+KLD++ I+G+ D Sbjct: 121 TTVSAWPEMTEAGPFQVGFVPLSHSIPESSGLVIDTPAGRIVHSGDFKLDENPIVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + G+ CDSTN M SE + I ++ A+G + TTF+S+V+R Sbjct: 181 RKLWEEVAKPGVKVFACDSTNVMSRHPGRSESSVGGEIEKLVGTAEGVFVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + ++ + ++ GR + LLG +++R++ AI+ G++ +S E PRE L++I T Sbjct: 241 VLTLAEAGQRAGRSVCLLGRAMRRMIEAAIETGVLADFPRTVSPEDARNIPRENLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+ G+ + ++L E D +FSS+ IPGNE + I N+L E+GV VI + Sbjct: 301 GSQGERRAASAQLANGKYQGIELKEGDMFLFSSKTIPGNERGVLRIVNQLSEKGVDVI-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ M++ ++P++LV +HGE HL H +LA + GI + NG Sbjct: 360 DSSGLYHVSGHANRPDLETMHEILQPEILVPMHGEHRHLREHVKLADKRGIKGI-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L ++ + + G DG + D + R +++ GH+ VNV+LD Sbjct: 419 MMIDLTGKAPKVAEYIDTGRTYLDGSVKYGALDGIVRDRIRMALNGHVMVNVILDEEDAP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G+ + +L + + D L E + R + Sbjct: 479 LGEPWCELRGLAEQGSSNAPLVDVLEADLDQFLGRADDKTLADDDKLEEQLRRIARQTTQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VTV I+++S Sbjct: 539 GEIGKKPEVTVVISRLS 555 >gi|260891166|ref|ZP_05902429.1| metallo-beta-lactamase family protein [Leptotrichia hofstadii F0254] gi|260859193|gb|EEX73693.1| metallo-beta-lactamase family protein [Leptotrichia hofstadii F0254] Length = 623 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 155/560 (27%), Positives = 289/560 (51%), Gaps = 12/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E++ +PLGG+ E+G NM + Y + I++D G++FP+D+ G+D++ PD +++ Sbjct: 70 KEEKMYVIPLGGIEEVGKNMTAFQY----KDEIIVVDAGLTFPEDEHLGIDVIIPDFSYL 125 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIGLLEAKRVYERVSKKI 118 R + + +TH HEDH GA+ + L ++P+Y + L +AK + Sbjct: 126 ESNRHKIKGLLLTHGHEDHIGAIPYFYQKLGTENIPMYGGRLTLALAKAKFEKKDAKLPK 185 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + F++E + V HSI + A+ I++P I+H+GD+K+D + G+ Sbjct: 186 EKVISGRTILKVSKYFTVEFISVTHSIADCYAICIKTPAATILHSGDFKVDLTPVDGEGF 245 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L +G EG+ L+ DSTNA G SE+ + +++ D A G +++ F+S V Sbjct: 246 DFGRLAQLGEEGVDLLLSDSTNAQIPGFTPSERTVGESLKDEFVKANGRIILAAFASHVH 305 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++IAE+ GRKI + G S+ ++ + ++G +K + + + YP +++++ Sbjct: 306 RLQQIVNIAEKNGRKIAIDGRSMVKIFEICSNLGYLKIPKDIMIDIDKVETYPANKVLIL 365 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP +AL++++ G +++ L E DTV+ S+ IPGNE A N+L+++ V+ Sbjct: 366 CTGTQGEPLAALSRIANGTHKHISLREGDTVVISATPIPGNEKAATKNINQLMKREASVV 425 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 E +HVSGH + K M ++P+ + +HGE + HKELA+ G+ V Sbjct: 426 FEKGIG-IHVSGHGCQEEQKLMINLVKPKFFLPVHGEYAMIKKHKELAMAVGVPEKNVIL 484 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG L L + +V G DGF IG + + R+ L+ G + +++ Sbjct: 485 SENGAKLELSKSQFRHVGKVPSGATFIDGFGIGDIGNAVLKDRQNLADDGIVIISISQYR 544 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + E+V G Y+ D + + + + + K++ +++ I + + Sbjct: 545 NGKFNKQVELVTRGF-VYNKDAESLLSETKELIKMELSSMENEGIKEIGKIKQRIRAKIG 603 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K ++P++ I ++ Sbjct: 604 EFLNKETDREPIILPIIMEV 623 >gi|284031136|ref|YP_003381067.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283810429|gb|ADB32268.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 561 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 17/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ L + LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD + Sbjct: 14 LPDDALRVVALGGLGEIGRNMTVFEH----RGKLLVVDCGVLFPEEHQPGVDVILPDFGW 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + AI +TH HEDH G + L +PV S + + +K R+ K Sbjct: 70 IRDRLDKIEAIVLTHGHEDHIGGVPYLLKERGDIPVVGSKLTLAFITSKLKEHRL--KPV 127 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + GD+ +G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + +TD Sbjct: 128 TVEVKEGDRQQLGPFECEFLAVNHSIPDGLAVAIRTRAGLVLHTGDFKMDQFPLDRRLTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ M DSTNA G +EK + I + + A G ++V++F+S V R Sbjct: 188 LRGFARLGEEGVDLFMTDSTNADVPGFTTAEKDLGPAIDQVFRTAPGRIIVSSFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ ++D A+ GRK+ +G S+ R + +A D+G + L + + P ++ ++ Sbjct: 248 IQQVLDAAKAGGRKVAFVGRSMVRNMGIARDLGYLNVPKGLIVDLKELEQLPDRKVTLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ E DTV+ +S IPGNE AI + N L+ G V+ Sbjct: 308 TGSQGEPMAALSRMANRDHM-IRIGEGDTVLMASSLIPGNENAIYAVINGLIRWGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HL A+ LA G+ V Sbjct: 367 KG-NAKVHVSGHASAGELVYCYNLVKPRNVLPVHGEFRHLKANAALATSTGVPAERVIIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G ++ L I +V G D +G + + RR L G ++V +L+D N Sbjct: 426 EDGVVVDLHKGRARITGKVEAGYVYVDAMTVGGVTEANLKDRRTLGEEGVVTVVLLVDAN 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+ + G D K ++ + + D L + + A+ Sbjct: 486 TGKLAEPPDFLARGFVHDDT----TFKPVIPVIEEALAKAAAEAIGDASQLEQLVGRAVG 541 Query: 536 SLLKKVWGKKPLVTVFIN 553 + + W ++P+V + Sbjct: 542 NWTYRHWRRRPVVIPVVI 559 >gi|239926681|ref|ZP_04683634.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291434994|ref|ZP_06574384.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291337889|gb|EFE64845.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] Length = 561 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 170/553 (30%), Positives = 288/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 19 LRVVALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + LEAK + + + + Sbjct: 75 DDIVAVILTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLEAKLKEHGIRPRTVRV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 133 EGDRRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHTGDFKMDQFPLDDRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 193 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L +S + P ++ ++ TGSQG Sbjct: 253 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVSTKELEKLPDHKVTLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 313 EPMAALSRMANRDHM-IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y +RP+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 371 KVHVSGHASAGELVYCYNIVRPRNVMPVHGEWRHLRANGDLAIRTGVDPDRVVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 431 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLTLAAEGVVTVVAIVDADTGALT 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 491 EPPDFLARGFVHDDATFEPVIP----VIEKTLATAAEEGVGDARQLEQLLARAVANWAFR 546 Query: 541 VWGKKPLVTVFIN 553 +KPL+ I Sbjct: 547 AHRRKPLIIPVII 559 >gi|89070153|ref|ZP_01157482.1| metallo-beta-lactamase family protein [Oceanicola granulosus HTCC2516] gi|89044270|gb|EAR50416.1| metallo-beta-lactamase family protein [Oceanicola granulosus HTCC2516] Length = 551 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 192/553 (34%), Positives = 305/553 (55%), Gaps = 4/553 (0%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 +++LPLGG GEIGMN +YGYG+P + I++D GV+FP D PGVDL+ PDI ++ + Sbjct: 1 MIYLPLGGAGEIGMNCYVYGYGAPGRERLIVVDLGVTFPDMDTTPGVDLILPDIAWLAER 60 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 R + IFITHAHEDH GA+ L S L VP+YA F + K + Sbjct: 61 RDRIEGIFITHAHEDHVGAVGHLHSRLDVPIYARAFTANIARRKLEEYGIVDPAAVRTVS 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + V +G F + + V+HSIPE+ +VI + G +VHTGD+K+D ++GD D+ Sbjct: 121 AWPETVSLGPFEVGFLPVSHSIPESAGMVIDTAAGRVVHTGDFKIDVTPVVGDPFDRAMW 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 ++ G+ AL+CDSTN SE I I +M++A G V+ TTF+S+++R++++ Sbjct: 181 ASVAEGGVKALVCDSTNVFSPHEGRSELSIGPEIETLMRSATGMVVATTFASNIARLKTL 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A + GR + LLG +++R+V A++ G++ ++ E PRE ++++ TGSQG Sbjct: 241 AQAATRAGRSVCLLGRAMRRMVEAAVETGLLTDFPHTVAPEDAVQMPRENVMLLVTGSQG 300 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+A AQL+ G+ ++L E DT +FSS+ IPGNE + I N L E+GV +I +D+ Sbjct: 301 ERRAASAQLANGKYLGLQLKEGDTFLFSSKTIPGNERGVIRIMNMLSEKGVDII-DDSSG 359 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 HVSGH DL M+ +RP +V +HGE HL H +LA + G + + NG M+ Sbjct: 360 RYHVSGHANRPDLAAMHALMRPDTVVPMHGEHRHLREHVKLAEEGGFSGI-LAVNGTMVD 418 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L + + V G DG D + R +++ GH+ V ++LD + G P Sbjct: 419 LTDGTPRVAEFVETGRTYLDGSTQVGALDGVVRDRIRMALNGHVVVTLILDEEGDPLGEP 478 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +G+P + ++L + ++ + + L + + + R + G Sbjct: 479 WCEVMGLPETGASRAPLVEVLESDLNQFLMRASKKTLANEDALEKELRTITRRTSQSEIG 538 Query: 544 KKPLVTVFINKIS 556 KKP VTV I++++ Sbjct: 539 KKPEVTVVISRLA 551 >gi|262039469|ref|ZP_06012773.1| ribonuclease J 1 [Leptotrichia goodfellowii F0264] gi|261746536|gb|EEY34071.1| ribonuclease J 1 [Leptotrichia goodfellowii F0264] Length = 624 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 151/556 (27%), Positives = 284/556 (51%), Gaps = 12/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ E+G NM + Y + I++D G++FP+D+ G+D++ PD +++ R Sbjct: 75 MYVIPLGGIEEVGKNMTAFQY----KDEIIIVDAGLTFPEDEHLGIDVIIPDFSYLESNR 130 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + +TH HEDH GA+ L+ L +P+Y + L +AK + I Sbjct: 131 EKIKGLLLTHGHEDHIGAIPYLYQKLGTEDIPMYGGRLTLELAKAKFERKDAKLPKEKII 190 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 F++E + V HSI + A+ I++P ++H+GD+K+D + G+ D Sbjct: 191 KGRSILKISKYFTVEFISVTHSIADCYAICIKTPAATVLHSGDFKVDLTPVDGEGFDFAR 250 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ L+ DSTNA G +SE+ + +++ + AKG +++ F+S V R++ Sbjct: 251 FAQLGEEGVDLLLSDSTNAQIPGFTLSERTVGESLKEEFAKAKGRIILAAFASHVHRLQQ 310 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 II IAE+ RKI + G S+ ++ + ++G +K + + + P +++++ TG+ Sbjct: 311 IIYIAEKNNRKIAIDGRSMVKIFEICSNLGYLKIPKGIMIDIDKVETLPANKVLILCTGT 370 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ G + + L + DTV+ S+ IPGNE A N+L+++ V+ E Sbjct: 371 QGEPLAALSRIANGSHKYITLRDGDTVVISASPIPGNEKAAYKNINQLMKRHANVVFEKG 430 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +HVSGH + K M ++P+ + +HGE + L HK+ A GI + NG Sbjct: 431 IG-IHVSGHGCQEEQKLMLNLVKPKFFMPVHGEYVMLKKHKDSAEAVGIPSQNIILAENG 489 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 L L + + +V G+ L DGF IG + + R+ L+ G + ++V Sbjct: 490 MKLELTKSSFKAVGKVPSGVTLIDGFGIGDIGNAVLKDRQNLADDGIVIISVSQYKTGTF 549 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 E+V G Y+ D + + + + ++ K+ +++ + + L Sbjct: 550 NKQIELVTRGF-VYNKDAESLLSETKELIKLELENMETQGIKETGKIKQRLKIKVGEFLN 608 Query: 540 KVWGKKPLVTVFINKI 555 K ++P++ I ++ Sbjct: 609 KKTDREPIILPIIMEV 624 >gi|170017715|ref|YP_001728634.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc citreum KM20] gi|169804572|gb|ACA83190.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Leuconostoc citreum KM20] Length = 560 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 166/560 (29%), Positives = 278/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+D+L G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QDEIIVVDAGIKFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ ++E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGTVLEFDQLNVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSR 239 S+ +G +G+L +M DSTNA R SE + K++ I + G ++ TF+S+++R Sbjct: 183 WSMARLGEKGVLLMMSDSTNAERPEWTKSEAWVAKSVNRIFDKLEHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDNMLVEQSEIKHIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNAVINKLEEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + I + Sbjct: 363 GKVN-NIHTSGHGGQEEQKLMLALMKPKYFMPVHGEYRMLKVHASLAHELDIPKDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + + DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGENARVAGHFPGDDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G++ + + T+ + +R+++ L Sbjct: 482 KKEILSGPDILSRGF-VYMRESGELINEGRRIIFGTMRRIMNNSNASEADIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP++ + I Sbjct: 541 RFLYKETARKPMILPMLIMI 560 >gi|300858684|ref|YP_003783667.1| hypothetical protein cpfrc_01267 [Corynebacterium pseudotuberculosis FRC41] gi|300686138|gb|ADK29060.1| hypothetical protein cpfrc_01267 [Corynebacterium pseudotuberculosis FRC41] gi|302206393|gb|ADL10735.1| Ribonuclease J [Corynebacterium pseudotuberculosis C231] gi|302330949|gb|ADL21143.1| Ribonuclease J [Corynebacterium pseudotuberculosis 1002] gi|308276636|gb|ADO26535.1| Ribonuclease J [Corynebacterium pseudotuberculosis I19] Length = 683 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 172/556 (30%), Positives = 283/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM ++ Y + K +++DCGV FP PGVDL+ PD I Sbjct: 117 KNGLRIYALGGISEIGRNMTVFEY----NGKMLLVDCGVLFPSSGEPGVDLILPDFGPIE 172 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+YAS F + L+ AK R K+ I Sbjct: 173 DKLDKVEALVVTHGHEDHIGAIPWLLKLRPDLPIYASKFTLALIAAKCREHRQRPKL--I 230 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ G F+I VNHSIP+ + L I++ G ++HTGD KLD G TD Sbjct: 231 EVNEKSDINRGPFNIRFWAVNHSIPDCLGLAIKTGAGLVIHTGDIKLDQTPTDGRPTDLP 290 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I + ++ +AK V++ +F+S+V R++ Sbjct: 291 ALSRFGDEGVALMLCDSTNATTPGVSGSEADIAPTLKRLVGDAKQRVILASFASNVYRVQ 350 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A +G +K +S + ++++I TG Sbjct: 351 AAVDAAVASGRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVMLITTG 410 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 411 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSR 470 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 E VH SGH Y +L +Y RP + +HGE HL A+KELA+ G+ V +N Sbjct: 471 -EAKVHTSGHGYSGELLFLYNAARPVNAMPVHGEWRHLRANKELAISTGVERDRVVLAQN 529 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L ++ ++ G DG +G + +R L G +++ ++DN Sbjct: 530 GVVVDLVDGRARVVGQIQIGNLYVDGVTMGDIDAGVLEERTSLGEGGLIAITAVIDNRTG 589 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + + V T+ DL D + + + + Sbjct: 590 RLLERPTVQAKGFS---EDAVAMMPEVAELVENTMTDLAGEGENDPYRMVQQLRRRVSRF 646 Query: 538 LKKVWGKKPLVTVFIN 553 +++ W +KP++ + Sbjct: 647 VEQKWRRKPMIMPTVI 662 >gi|311068201|ref|YP_003973124.1| ribonuclease J2 [Bacillus atrophaeus 1942] gi|310868718|gb|ADP32193.1| ribonuclease J2 [Bacillus atrophaeus 1942] Length = 555 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 161/562 (28%), Positives = 294/562 (52%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++++ + AIF+TH H+++ G + L + L VPVY + + LL K ++K Sbjct: 57 ISYLIERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + + + NHSIP+++ + +++ +G+IV TGD+K D L Sbjct: 117 SDLREIHSKSVITFESTKVSFFKTNHSIPDSVGVSLKTSLGSIVCTGDFKFDQTPALNQS 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA R G SE + I D M N++ V++ F+S++ Sbjct: 177 CDIGEIAKIGNNGVLALLSDSANAERPGYTPSEASVSGEISDAMYNSENRVIIAVFASNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI+ +I A Q GRK+ + G +L+ V+ +A +G ++ D+LF+ + Y + ++ + Sbjct: 237 NRIQQVIQAAAQNGRKLAVAGKNLQSVLQLARKLGYVEADDELFIPVQDVKKYSKREVAI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + GS GEP +AL ++++ + + + E DTV+ +S IPG+E+ + L G +V Sbjct: 297 VTAGSHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELIYSKTVDLLARSGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH ++A + + + Sbjct: 357 IF--AQKRVHVSGHGSQEELKLMINLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I D+V +G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIEKGDVVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEI+ G Y + + + V + V + + + L++++ A Sbjct: 475 KQKKHLVSGPEIITRGF-VYVRESEGLIIQATELVRSIVTEATETSVVEWSTLKQAMRDA 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|325962838|ref|YP_004240744.1| hypothetical protein Asphe3_14360 [Arthrobacter phenanthrenivorans Sphe3] gi|323468925|gb|ADX72610.1| conserved hypothetical protein TIGR00649 [Arthrobacter phenanthrenivorans Sphe3] Length = 563 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 290/555 (52%), Gaps = 16/555 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGG+GEIG NMA++ K +++DCGV FP++ PGVDL+ PD ++I Sbjct: 19 TLRIVPLGGLGEIGRNMAVFEI----DGKLLIVDCGVLFPEETQPGVDLILPDFSYIEDR 74 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++A+ +TH HEDH GA+ L + +P+ S + L+EAK R+ + Sbjct: 75 LDDIVAVVLTHGHEDHIGAVPYLLRRRNDIPLVGSQLTLALIEAKLQEHRIRPYTLTVE- 133 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G G F E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 134 -EGQVEKFGPFECEFVAVNHSIPDALAVFIRTAGGTVLHTGDFKMDQLPLDGRITDLRHF 192 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+ M DSTNA G +EK I + + A ++V +FSS V R++ + Sbjct: 193 AKLGEEGVDLFMSDSTNADIPGFTTAEKEIGPTLERLFGQASKRIIVASFSSHVHRVQQV 252 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A + RK+ +G S+ R +++A +G + L + ++ P ++++++TGSQ Sbjct: 253 LDAAAKHNRKVAFVGRSMVRNMAIAEKLGYLDVPPGLIVDIKNIDNLPDNRVVLMSTGSQ 312 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL++++ G+ R V + E DTVI +S IPGNE A+ I N L++ G VI + Sbjct: 313 GEPMAALSRMANGDHR-VVVGEGDTVILASSLIPGNENAVFRIINGLLKLGADVIHKG-N 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +L Y + P + +HGE HL+A+ ++A++ G+ V NG Sbjct: 371 AKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGKIAIESGVPEASVILADNGT 430 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 ++ L +++ +V G DG +G+ D + RR L G +S+ ++ + Sbjct: 431 VIDLKDHRADVVGQVEVGFIYVDGSSVGEITDADLKDRRILGDEGFISIITVIHRATGKV 490 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI G+ D I + + V++ L++ + + + + Sbjct: 491 VSGPEIHARGVAEDDSVFDDIIPKINAALEEAVLNHADHTS---HQLQQVVRRVVGTWVN 547 Query: 540 KVWGKKPLVTVFINK 554 + +KP++ + + Sbjct: 548 RKLRRKPMIIPVVLE 562 >gi|119961428|ref|YP_947353.1| metallo-beta-lactamase family protein [Arthrobacter aurescens TC1] gi|119948287|gb|ABM07198.1| metallo-beta-lactamase family protein [Arthrobacter aurescens TC1] Length = 563 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 295/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L +PLGG+GEIG NMA++ K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 15 LPKGTLRIVPLGGLGEIGRNMAVFEI----DGKLLVVDCGVLFPEETQPGVDLILPDFSY 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++++ + +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 71 IEDRLQDIVGVVLTHGHEDHIGAVPYLLRLKADIPLIGSQLTLALVEAKLQEHRIKPYTL 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G G F E V VNHSIP+ +A+ IR+ GN++HTGD+K+D + G +TD Sbjct: 131 TVT--EGQVEQFGPFECEFVAVNHSIPDALAVFIRTEGGNVLHTGDFKMDQLPLDGRITD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ M DSTNA G +EK I + + AK ++V +FSS V R Sbjct: 189 LRHFARLGEEGVDLFMADSTNADVPGFTTAEKEIGPTLDRLFGQAKKRIIVASFSSHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+ +G S+ R +++A +G + + + + ++ P +++++++ Sbjct: 249 VQQVLDAAAKHGRKVAFVGRSMVRNMAIAAKLGYLDVPEGILVDIKNIDNMPDDRVVLMS 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ R V + + DTVI +S IPGNE A+ I N L++ G VI Sbjct: 309 TGSQGEPMAALSRMANGDHR-VVVGKGDTVILASSLIPGNENAVFRIINGLLKLGADVIH 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + VHVSGH +L Y + P + +HGE HL+A+ +AL+ G+ + Sbjct: 368 KGT-AKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGNIALESGVPAEGIILS 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG ++ L ++ +V G DG +G+ D + RR L G +SV ++ Sbjct: 427 DNGTVIDLKDHKANVVGQVEVGFVYVDGSSVGEITDADLKDRRVLGDEGFISVITVISRT 486 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PEI G+ D +I + + V++ L++ + + Sbjct: 487 TGKIVSGPEIHARGVAEDDSVFDEIIPKINAALEDAVLNHTDHTN---HQLQQVVRRIIG 543 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + + ++P++ + + Sbjct: 544 TWVNRKLRRRPMIIPVVLE 562 >gi|25011843|ref|NP_736238.1| hypothetical protein gbs1804 [Streptococcus agalactiae NEM316] gi|24413384|emb|CAD47463.1| Unknown [Streptococcus agalactiae NEM316] Length = 559 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE +++VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLSVTFFRTTHSIPEPLSIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIDGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|320161309|ref|YP_004174533.1| hypothetical protein ANT_19070 [Anaerolinea thermophila UNI-1] gi|319995162|dbj|BAJ63933.1| hypothetical protein ANT_19070 [Anaerolinea thermophila UNI-1] Length = 548 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 187/559 (33%), Positives = 291/559 (52%), Gaps = 18/559 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N L +PLGG+GE+G N+ +Y Y + +++D G+ FP++D+ G+D + PD+T+ Sbjct: 1 MSNGILRVIPLGGLGEVGRNLMVYEY----DNEILVVDAGLMFPENDMLGIDYIIPDMTY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + I ITH HEDH GA+H L ++ P+YA+P GLLE K K Sbjct: 57 LAQNHTKVKGIVITHGHEDHIGAIHHLLDQVNAPIYATPLTRGLLEVKLGRNGHGSKADL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + QAG+ V +G F +E V HSIP+ + L I +P G IVH+GD+K D + G TD Sbjct: 117 RTVQAGETVQIGPFQVEFYHVCHSIPDGVGLGILTPAGLIVHSGDYKFDHTPVDGKSTDY 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G+LAL+ DSTNA R G SEK I + AKG +++ +F+S +SR+ Sbjct: 177 AKLAEFSKRGVLALLADSTNAERPGWTPSEKTIDAAFDQVFSEAKGRIIIASFASLISRM 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI +G+S+ + +A +G + D L + + P Q+ ++ T Sbjct: 237 QQAANAALRHGRKIAFVGASMLDNMKMARKLGYLNFPDDLVIPVDQILSLPPHQVTIMCT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP S L +LS G R + + DTV+ SS IPGNE + + NRL+ +G VI E Sbjct: 297 GSQGEPTSILGRLSLGTNRLFDIQKGDTVVLSSHPIPGNEENVYRVVNRLIARGASVIYE 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 PVHVSGH ++K + Q RP+ V IHGE HLV H LA + GI + ++ Sbjct: 357 AI-APVHVSGHASQEEMKLLLQLTRPKYFVPIHGELRHLVQHARLAREVGIPAENIQVIQ 415 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG +L + + D +V D +G + +R LS G + V++ + Sbjct: 416 NGMVLEFENGEMRLSDEQVPVSHVFVDSAGVGDVDPELMREREALSRDGVVMVHLTMSKE 475 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 +N + PEIV G D ++ + + +I + +R + +R Sbjct: 476 FNAVVYDPEIVTRGFLLP-RDANELFAEMRRKIIQSASRANGN-------VRRVVEETVR 527 Query: 536 SLLKKVWGKKPLVTVFINK 554 L ++P+V V +++ Sbjct: 528 EYLYSETRRRPMVYVTVSR 546 >gi|302557415|ref|ZP_07309757.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] gi|302475033|gb|EFL38126.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] Length = 554 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 168/553 (30%), Positives = 288/553 (52%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 12 LRVTPLGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRL 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + L+AK + + + + Sbjct: 68 DDIVAVVLTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLDAKLKEHGIRPRGVRV--R 125 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 126 EGDRRAFGPFDCEFVAVNHSIPDSLAVAIRTRAGLVLHTGDFKMDQFPLDDRITDLRAFA 185 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 186 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 245 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L +S + P ++ ++ TGSQG Sbjct: 246 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVSTKELEKLPDHKVTLVCTGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 306 EPMAALSRMANRDHM-IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 364 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANGDLAIRTGVDPERVVIAEDGVV 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 424 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLTLAAEGVVTVVAIVDADTGALT 483 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 484 EPPDFLARGFVHDDSTFEPVVP----VIEKTLATAAEEGVGDARQLEQLVARAVANWAFR 539 Query: 541 VWGKKPLVTVFIN 553 ++PL+ I Sbjct: 540 THRRQPLIIPVII 552 >gi|284992328|ref|YP_003410882.1| beta-lactamase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284065573|gb|ADB76511.1| beta-lactamase domain protein [Geodermatophilus obscurus DSM 43160] Length = 566 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 289/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NMA+ + K ++IDCGV FP+ + PGVDL+ PD I Sbjct: 23 LRVMALGGLGEIGRNMAVLEF----DGKLLVIDCGVLFPEAEQPGVDLILPDFGIIEHRL 78 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH GA+ L +P+ S F + L++AK R+ + Sbjct: 79 DDVVAVVLTHGHEDHIGAIPYLLRMRGDIPLVGSRFTLALVKAKLREHRLDP--VLVEVA 136 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 AGD G F E + VNHSIP+ +A+ + +P G +VHTGD+K+D + G +TD + Sbjct: 137 AGDDHLAGPFHCEFISVNHSIPDALAVAVHTPAGVLVHTGDFKMDQLPLDGVLTDLGAFA 196 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI L+ DSTNA G E+ I + D+ + A ++V++F+S V RI+ ++ Sbjct: 197 RLGLEGIDLLLADSTNAEIPGFVTPERSIGPVLEDVFRRATQRLIVSSFASHVHRIQQVL 256 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A GRK+ +G S+ R + VA D+G+++ L +S + P EQ+++++TGSQG Sbjct: 257 DAAHVHGRKVAFVGRSMVRNMGVARDLGLLRVAPGLMVSLDEATSMPPEQVVLVSTGSQG 316 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL +++RGE V + DT++ +S +PGNE A+ + N L G V+ ++ Sbjct: 317 EPLSALGRMARGEHHQVTIEAGDTIVLASSLVPGNETAVYKVINGLARLGATVVHKET-A 375 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKM 421 VHVSGH +L+ + +P+ L+ +HGE HL AH LA + V NG + Sbjct: 376 RVHVSGHAPAGELRTLLNVAKPRHLMPVHGEWRHLRAHAALAEETGMAADRVLLAENGVV 435 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L I+ V G DG +G + + +RR L G +++ V+++ + I Sbjct: 436 VDLVDGKATIVGSVPVGDVYVDGLNVGDVGEESLQERRILGDEGFVALTVVIEPSTGTIV 495 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + G D + L+ V ++ D L + I + + Sbjct: 496 RPVHLSARGFA----DDPSVFDPALQLVEESLRRTLADGVTDPHRLSQVIRRTIGKWVSD 551 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 552 TYRRRPMIIPTVLEV 566 >gi|313123461|ref|YP_004033720.1| mRNA degradation ribonuclease j1/j2, metallo-beta-lactamase superfamily enzyme [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280024|gb|ADQ60743.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 559 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+ EIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKQNEVAVFAIGGLHEIGRNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ ++H HEDH G + L + +PVYA+PFA+ L+++K + + Sbjct: 59 LVKNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + + R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+LAL+ DSTNA SE+ + ++++I+ +G ++ TF+S++ Sbjct: 179 NFQRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVASSLHNIITGIEGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + L + E+ P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLDVPEGLIVDAEAINSLPPEKVMLL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R +KL DTVIFSS IPGN +++ + N+L+E G V+ Sbjct: 299 CTGSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTLSVNQLINKLMEGGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKLMVELTKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG+++ P+ I ++ D ++ + R+ LS G + +D Sbjct: 418 LKNGEVVCFSPEGARIAGDIHVKDVFVDTSGAADVGNIVVRDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K V + ++ + + +R++I + Sbjct: 478 KHKQVLAGPDILSRGF-VYMRESQDLINAAQKLVYHVLKTEMAKSDKPKDSEIRKAIIES 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSRTERRPMILPMLVE 557 >gi|148273215|ref|YP_001222776.1| metallo-beta-lactamase family hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831145|emb|CAN02097.1| putative hydrolase, metallo-beta-lactamase superfamily [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 558 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 163/559 (29%), Positives = 292/559 (52%), Gaps = 17/559 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K L P+GG+GEIG NM + K +++DCGV FP++ PGVDL+ PD + Sbjct: 11 LKPGTLRITPIGGLGEIGRNMTTFEI----DGKILVVDCGVLFPEEHQPGVDLILPDFSS 66 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ I +TH HEDH GA+ L +P+ S + L+EAK R++ Sbjct: 67 IKDRLDDVVGIVLTHGHEDHIGAVPYLLKLKQDIPLIGSGLTLALIEAKLKEHRITPYTF 126 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + GD+ +G F +E V VNHSIP+ +A+ I + G+++HTGD+K+D + +TD Sbjct: 127 QV--KEGDRERLGPFELEFVAVNHSIPDALAVAITTEAGSVLHTGDFKMDQLPLDDRITD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G GI M DSTNA G +E+ I + ++ A V+V +FSS V R Sbjct: 185 LRAFARLGEAGIDLFMSDSTNADVTGFTPTERSIGPVLDAVISKAPRRVIVASFSSHVHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GR++ +G S+ R +++A ++G +K D + + + P ++++ ++ Sbjct: 245 VQQVLDAAHANGRRVAFIGRSMIRNMTIAAELGYLKVPDGVLIDSKKAVDLPDDRIVYMS 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + L+++ E +++ + DTVI +S IPGNE A+ I N L + G V+ Sbjct: 305 TGSQGEPMAVLSRMVNQEH-QIEIGQDDTVILASSLIPGNENAVYRIINGLTKLGANVVH 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HLVA+++LA+Q G+ Sbjct: 364 KA-NAKVHVSGHAAAGELLYCYNILKPRNVLPVHGEYRHLVANQQLAIQTGVPERNTFLA 422 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G +L + + + ++ G DG +G+ D + RR LS G +++ V+++ Sbjct: 423 EDGTVLDMKDGHVRVTGQLDIGYVYVDGSTVGEITDADLKDRRILSEEGFVTIFVVVEPQ 482 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 PEI G + ++ + V+ + + +D + + + Sbjct: 483 TGKAMVGPEIEARGFA----EDSRVFDSVKPLVVKALAEAAANGTRDTHAYAQVVRRTVG 538 Query: 536 SLLKKVWGKKPLVTVFINK 554 + ++P++ + + Sbjct: 539 RWVNSSHRRRPMIIPVVIE 557 >gi|256379805|ref|YP_003103465.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] gi|255924108|gb|ACU39619.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] Length = 559 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 291/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GE+G NM ++ + + +++DCGV FP+DD PGVDL+ PD I Sbjct: 16 LRVVALGGIGEVGRNMTVFEHA----GRLLVVDCGVLFPEDDQPGVDLILPDFRAIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH HEDH GA+ L +PV S F + LL AK R + K+ + Sbjct: 72 DDIEAIVLTHGHEDHIGAVPFLLKLRPDLPVVGSRFTLALLAAKCREHRQNPKLIEVV-- 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ D G F +E VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD Sbjct: 130 EGERRDAGPFELEFFAVNHSIPDALAVAIRTSAGLVLHTGDIKLDQLPLDGRLTDLAGFS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G + E+ I + ++++ A V+V F+S V R++ ++ Sbjct: 190 RLGDEGVDLFLVDSTNAEVPGFVVPEREIGPVLENVIRKADQRVIVACFASHVHRVQQVL 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GR++ L+G S+ R + +A ++G++ D LF+ + P +Q++ ++TGSQG Sbjct: 250 DVAVRYGRRVALVGRSMVRNMGIAAELGLLHVPDGLFVDIDEAMRMPEDQVLFVSTGSQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + DT++ +S IPGNE A+ + N L G V+ + Sbjct: 310 EPLSALSRMARGEHRQISIRAGDTIVLASSLIPGNENAVFGVVNGLSRLGATVVHQG-NA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP ++ +HGE HL A+ LA+ G+ V +G + Sbjct: 369 KVHVSGHSPAGELLFLYNAVRPSNVMPVHGEWRHLRANAALAVATGVNEERVVIAEDGVV 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + + I VV G DG +G + ++ R L G +++ V +D+ Sbjct: 429 VDMIDGKAAISGRVVVGNVYVDGLSVGDVGESTLSDRLVLGEGGFIAITVAIDSSTGRAV 488 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G D K + V + D + +++ + + + Sbjct: 489 APPTVSGRGFS----DDPKALDKAVSLVEMELSRTEAENITDSHRIAQAVRRVVGRWVAE 544 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ I + Sbjct: 545 TYRRRPMIVPTIIPV 559 >gi|138894798|ref|YP_001125251.1| Zn-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] gi|196247577|ref|ZP_03146279.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|134266311|gb|ABO66506.1| Zn-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] gi|196212361|gb|EDY07118.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 556 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 164/556 (29%), Positives = 276/556 (49%), Gaps = 12/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ LGGVGEIG NM + ++D GV +P+D++ G+D V PDIT++++ Sbjct: 9 EKIRIFALGGVGEIGKNMYVVE----LDEDIFVLDAGVMYPEDEMLGIDKVIPDITYLIE 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIF+TH HE+H GA+ + L PVY + +GL EA + ++ Sbjct: 65 RQHRIQAIFLTHGHEEHMGAIAYVLKQLSAPVYGTKLTLGLAEAILKEQGIT-NANLNEI 123 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++ + R HSIP+++ + + + G IV+T D+K D D + Sbjct: 124 HPDAELLFDKAKVTFFRTIHSIPDSVGISLHTSQGAIVYTSDFKFDQTPYGNSRADLGKM 183 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+L L+ DSTNA R G S+ + I D++ +AKG V V ++S++ RI+ + Sbjct: 184 AQIGEQGVLCLLSDSTNAERPGYSGSDAVVAHEIADVIGHAKGRVFVACYASNIMRIQQV 243 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + A Q GRK+ ++G +L +V+ +A+ +G + D++ +S Y ++LI++ TG Sbjct: 244 LYAAHQYGRKVAVIGKTLHKVMDIAVRLGYLHLPDKVTISAHDLDRYRDQELIILTTGGH 303 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL +++R + V + E DTVI ++ +PG E+ + L G VI + Sbjct: 304 GEPISALWRMARQTNKQVNIKEGDTVIVAASVMPGYELGFAKTIDALYRAGANVIY--RD 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 VHVSGH +LK M ++P+ + +HGE AH LA GI + G+ Sbjct: 362 RQVHVSGHGCQEELKLMLNLMKPKYFIPVHGEYRMQKAHARLAKAVGISEERTFLLDKGE 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ +V +G L DG IG ++ + RR LS G L V L+ I Sbjct: 422 VIEFRSGTARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIAVVTLNKEAKTI 481 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + + + + V + + + L+ +I AL L Sbjct: 482 AAGPEIISRGF-VYMREAETLLEEAEQMVAAIIERCLESYMLEWSSLKANIREALSQFLF 540 Query: 540 KVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 541 EKTKRKPMILPIIMEV 556 >gi|38234044|ref|NP_939811.1| hypothetical protein DIP1463 [Corynebacterium diphtheriae NCTC 13129] gi|38200306|emb|CAE49991.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 684 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 166/556 (29%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 118 KNGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIE 173 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ ITH HEDH GA+ L +P+ AS F + L+ AK R K+ I Sbjct: 174 NKLDKVDALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCREHRQRPKL--I 231 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ G F+I VNHSIP+ + + I++ G ++HTGD KLD G TD Sbjct: 232 EVNEKSDINRGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLP 291 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ L+C+STNA G SE + + ++ +AK V++ +F+S+V R++ Sbjct: 292 ALSRFGDEGVDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVILASFASNVYRVQ 351 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A +G +K +S + ++++I TG Sbjct: 352 AAVDAAVAAGRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTG 411 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 412 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGR 471 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH + +L +Y RP+ ++ +HGE HL A+KELA+ G+ V +N Sbjct: 472 -DAKVHTSGHGFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEADRVVLAQN 530 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L ++ ++ G DG +G + +R L G +++ ++D+ Sbjct: 531 GVVVDLVDGRARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTA 590 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + + V T+ DL D + + + + Sbjct: 591 RLLERPTVQAKGFS---EDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRF 647 Query: 538 LKKVWGKKPLVTVFIN 553 +++ W +KP++ + Sbjct: 648 VEQKWRRKPMIMPTVI 663 >gi|110633391|ref|YP_673599.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110284375|gb|ABG62434.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 555 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 290/556 (52%), Positives = 393/556 (70%), Gaps = 3/556 (0%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++E LVF PLGGVGEIGMN+ALYGYG +R WIMIDCGVSFP ++LPGVDL+ PD+ Sbjct: 1 MASDEAELVFCPLGGVGEIGMNLALYGYGPRDNRTWIMIDCGVSFPGENLPGVDLILPDV 60 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +FI + +NL I ITHAHEDHYGAL DLW L V+ +PF GLLEAKR E + K+ Sbjct: 61 SFIEDQLENLAGIIITHAHEDHYGALLDLWPRLKTNVWMTPFTAGLLEAKRQGEVNAPKV 120 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 P ++AG+ VG F+IE++ V HSIPE ++L I +P G ++HTGDWK+D LG T Sbjct: 121 PVTIYKAGETFTVGPFAIEAIAVAHSIPEPVSLAITTPAGTVIHTGDWKIDPAPELGPKT 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D+ A+G +G+LAL+CDSTNAMREG SE+ + + + ++++ A G V VTTFSS+V Sbjct: 181 DEARFRALGEKGVLALICDSTNAMREGVSPSEQDVGRGLREVIEKAPGRVAVTTFSSNVG 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RIRSI + A GR++++LG SL+RV+ VA ++G + FL +E FG PRE +++ Sbjct: 241 RIRSIAEAARDAGRQVLVLGRSLQRVIDVADELGYLDGLPPFLVEEDFGYIPRENAVILC 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+ALA+L+R EMRNV L+ DTVIFSSR IPGNE AI IKN+L+EQG+RV+ Sbjct: 301 TGSQGEARAALAKLARDEMRNVALSPGDTVIFSSRTIPGNEKAILTIKNQLIEQGIRVV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 ED++ VHVSGHP N+LK+MY+W+RP++LV +HGE HLVA L GI V VRN Sbjct: 360 EDSDALVHVSGHPRRNELKQMYEWVRPRILVPVHGEAAHLVAQGSLGAMSGIPEVAQVRN 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G MLRL P P EIID+V G +DG +IG ++G+ RR+LSF GH++VNV+LD+ Y+ Sbjct: 420 GGMLRLAPGPAEIIDQVPFGRIYRDGKVIGTDDEVGVRDRRKLSFAGHVAVNVVLDDRYD 479 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + G P++V IG+P D G + ++L + V +P+ R+DL L+ E++ A+R+ Sbjct: 480 LAGDPDLVAIGLPQADSAGEPMEDIMLDAAVGAVRSIPRGNRRDLDLVGEAVRRAVRAAA 539 Query: 539 KKVWGKKPLVTVFINK 554 WGKKP+VTVF+ + Sbjct: 540 SDAWGKKPIVTVFVTQ 555 >gi|52080285|ref|YP_079076.1| putative RNase,metallo beta-lactamase superfamily protein,YmfA [Bacillus licheniformis ATCC 14580] gi|52785662|ref|YP_091491.1| YmfA [Bacillus licheniformis ATCC 14580] gi|319645934|ref|ZP_08000164.1| YmfA protein [Bacillus sp. BT1B_CT2] gi|52003496|gb|AAU23438.1| putative RNase,metallo beta-lactamase superfamily protein,YmfA [Bacillus licheniformis ATCC 14580] gi|52348164|gb|AAU40798.1| YmfA [Bacillus licheniformis ATCC 14580] gi|317391684|gb|EFV72481.1| YmfA protein [Bacillus sp. BT1B_CT2] Length = 554 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PDI Sbjct: 1 MKKNTENIRIIALGGVGEIGKNLYVIEI----DSDIFVVDAGLMHPENEMLGIDVVIPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +++++ + AIF+TH HE++ G + + L VPVY + + LL+ V+KK Sbjct: 57 SYLIERSDRVKAIFLTHGHEENIGGVFYCLNKLSVPVYGTKLTLALLKETLKQYGVNKKP 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + + + + NHSIP+++ + ++ +G+IV TGD+K D +L + Sbjct: 117 DLREIHSKSVITFESTKVSFFKTNHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPVLNQTS 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + IGN G+L L+ DS NA + G SE + I D+M NA+ V++ F+S+ + Sbjct: 177 DIGEIAKIGNSGVLCLLSDSANAEKPGYTPSEALVGGEISDVMYNAENRVIIAVFASNFN 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI+ +ID A Q GRK+ + G ++ ++ +A+ +G + + +F+ + YP+ ++ ++ Sbjct: 237 RIQQVIDAALQNGRKLAVSGKNISAILQLAMKLGYVTADEDMFIPVQEVKKYPKREVAIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 + GEP +AL ++++ + + + E DTV+ +S IPG E+ + L G +V+ Sbjct: 297 TGDNHGEPLAALTRIAKQGHKQLDIEEGDTVLIASSPIPGQELVYSKAVDLLTRAGAQVV 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 A+ VHVSGH +LK M ++P+ L+ ++GE AH +LA + + + Sbjct: 357 F--AQKRVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSKLAEEIGMKRSDIFL 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + G ++ ++I D+V G L DG +G ++ + RR LS G L V + LD Sbjct: 415 IEKGDVVEFRGQNVKIGDKVHSGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDK 474 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + PEI+ G Y + ++ + V V + + + L++++ AL Sbjct: 475 KKKHLVSGPEIITRGF-VYVRESEQLIVEATELVRELVNESTENAVVEWSALKQTMREAL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + +KP++ I ++ Sbjct: 534 NQFLYEKTKRKPMIIPIIMEV 554 >gi|304321900|ref|YP_003855543.1| metallo-beta-lactamase family protein [Parvularcula bermudensis HTCC2503] gi|303300802|gb|ADM10401.1| metallo-beta-lactamase family protein [Parvularcula bermudensis HTCC2503] Length = 555 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 208/555 (37%), Positives = 323/555 (58%), Gaps = 5/555 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL+FLPLGG GEIGMN+ ++ G ++R+W+MIDCGV+F D+ PG+DL+ PD +++ Sbjct: 2 QDELIFLPLGGSGEIGMNLNMFALGPANARQWMMIDCGVTFAGDEWPGIDLITPDHNYLL 61 Query: 63 KERKN---LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 E + L+ + +TH HEDH GA+ LW L +YA+PF L+ K + Sbjct: 62 DELDDGADLLGLVLTHGHEDHIGAVAHLWPDLDCDIYATPFTAELVRRKFHEVGIKNPPI 121 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I G + +G F +E + + HSIPE A+ IR+ G ++HTGDWK+D +LGDVTD Sbjct: 122 KII-DLGARFSLGGFDLEFITLTHSIPEPNAIAIRTKFGTVLHTGDWKIDPMPVLGDVTD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +L +G EG++A++CDSTN + EG SE + + + I+ G V VTTF+S+VSR Sbjct: 181 RTTLEDLGREGVMAMICDSTNVLSEGRSGSESDVAETLAQIIGEQTGRVAVTTFASNVSR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + S+ A+ R + LLG S+ R++ VA VG++ F+ G P +++ + T Sbjct: 241 LLSVCRAAQVTDRSVCLLGRSMLRMMDVAQQVGLLPPGISFVEPSEAGYLPHNKVLYLCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+AL +++R + + L E DTV+FSS+ IPGNE I + N L + GV VI Sbjct: 301 GSQGESRAALGRIAREDHPELSLGEGDTVLFSSKIIPGNERGIFDLINDLTDLGVTVITA 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + +HVSGHP ++L+ MY W++P+ + +HGEP H+ H LA + G+ RNG Sbjct: 361 EETY-IHVSGHPCRDELRDMYGWVKPEAAIPVHGEPRHMREHARLAEELGVGRTLVPRNG 419 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+RL PD ID+V G DG ++ + RR+L+ G + V+V D + Sbjct: 420 DMIRLAPDGPVRIDQVPAGRLYLDGRILLPEDSRALKSRRRLAEEGVIVVSVAFDAKGRL 479 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + +G+P D +G + L+ +T+ + LP+ + D + L I A+R++L Sbjct: 480 VGGPAVTALGVPEEDNEGEPLLPLIEETLEALMASLPRPKMADDRELETHIRRAIRAILA 539 Query: 540 KVWGKKPLVTVFINK 554 WGK+ + I + Sbjct: 540 PRWGKRGDILASIIR 554 >gi|325684370|gb|EGD26539.1| metallo-beta-lactamase superfamily protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 559 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+ EIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKQNEVAVFAIGGLHEIGRNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ ++H HEDH G + L + +PVYA+PFA+ L+++K + + Sbjct: 59 LVKNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + + R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+LAL+ DSTNA SE+ + ++++I+ +G ++ TF+S++ Sbjct: 179 NFQRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVASSLHNIITGIEGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + L + E+ P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLDVPEGLIVDAEAINSLPPEKVMLL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R +KL DTVIFSS IPGN +++ + N+L+E G V+ Sbjct: 299 CTGSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTMSVNQLINKLMEGGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKLMVELTKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG+++ P+ I ++ D ++ + R+ LS G + +D Sbjct: 418 LKNGEVVCFSPEGARIAGDIHVKDVFVDTSGAADVGNIVVRDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K V + ++ + + +R++I + Sbjct: 478 KHKQVLAGPDILSRGF-VYMRESQDLINAAQKLVYHVLKTEMAKSDKPKDSEIRKAIIES 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSRTERRPMILPMLVE 557 >gi|269219580|ref|ZP_06163434.1| metallo-beta-lactamase family protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210822|gb|EEZ77162.1| metallo-beta-lactamase family protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 557 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 160/560 (28%), Positives = 282/560 (50%), Gaps = 17/560 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + + +PLGG+GE+G N + YG K +++DCGV FP++ PGVDL+ PDI + Sbjct: 10 LSADTVRIVPLGGLGEVGRNCNVLEYG----GKIVVVDCGVLFPEERQPGVDLILPDIDY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +++ AI +TH HEDH GA+ L + + S I +EAK R+ K Sbjct: 66 LRDRVEDIEAIVLTHGHEDHIGAVPYLLKLRPDILLVGSRLTISFVEAKLAEHRI--KAN 123 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 GD +G F +E + VNHSIP+ +A+ +R+ GNI+ TGD+K+D + G +TD Sbjct: 124 SRVVAEGDVEKIGPFEMEFISVNHSIPDALAVFVRTDQGNILITGDFKMDQLPLDGRLTD 183 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G EG+ MCDSTNA G SE I I D+ A G ++V +FSS V R Sbjct: 184 LRAFARAGEEGVDLFMCDSTNAEVPGFVPSESEIGPVIDDVFARATGQIIVASFSSHVHR 243 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +++ A GR++ +G S+ R + +A ++G + + + + P + + ++ Sbjct: 244 VQQVLNAAHAHGRRVAFVGRSMIRNMGIAAELGYLDIPEGVLVDLADMPSLPENERVFMS 303 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + L++++ V DTV+F+S IPGNE ++ + N L++ G +V+ Sbjct: 304 TGSQGEPMAVLSRIASKSHPKVGAGPGDTVLFASSLIPGNENSVYRLINNLMKLGAKVVH 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y + P + IHGE H VA+ +A++ G+ V Sbjct: 364 QG-NARVHVSGHAAAGELLYCYNILEPAYAMPIHGEVRHQVANGGIAVKTGVPPQNVILA 422 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DN 475 NG ++ + + ++ +V DG IG + + RR L+ G +++ + Sbjct: 423 ENGSVIDMHDAEVSVVGQVPCHNIYVDGSSIGDITEEELKDRRILAEEGFVAIFAAVETK 482 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P I + D +I + + ++ + D +++++ + Sbjct: 483 EKEIVTGPHIQARAVAEDDSVFDEILPDVADALRESLENGA-----DTYQMQQAMRRVIG 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + + P++ + ++ Sbjct: 538 RWISRKLRRAPIIIPTVVEV 557 >gi|299140013|ref|ZP_07033183.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX8] gi|298598013|gb|EFI54181.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX8] Length = 553 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 179/560 (31%), Positives = 292/560 (52%), Gaps = 12/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M E+L +PLGG+GE GMN +G ++ID G+ FP+++L GVD+V PDI++ Sbjct: 1 MALEKLQMIPLGGLGEFGMNCLALRFG----DDILVIDAGLMFPEEELLGVDIVVPDISY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ R + I +TH HEDH G L + S L+VPVY + F + +E K R+ Sbjct: 57 LIENRSMVRGIVLTHGHEDHIGGLPWILSELNVPVYGTEFTLAYVEGKLDEHRLLDDAEL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G + +G FS+ +RV HS+ + ++L I +PVG ++HTGD+K+D + G D Sbjct: 117 IEILPGKRFTLGPFSVMPIRVTHSLVDCVSLAIHTPVGIVLHTGDFKIDLSSPDGHPFDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G +G+LAL+ DSTN R G EK + + DI K + + FSSS+ RI Sbjct: 177 QAFADLGKQGVLALLQDSTNVDRPGFTPGEKAVIPRLDDIFAATKKKIFFSCFSSSIHRI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 + +++A + GRK+ L+G S+ +A D+G I L + + ++L ++ + Sbjct: 237 KIAMELAHKHGRKVALVGRSIDNSTEIAQDLGYIDPPQGLIIHPGQIRDFAPDKLCILIS 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP SAL++ + + K+ DTV+ SSR IPGNE I + + L + RVI + Sbjct: 297 GTQGEPMSALSRAAVDNHKFAKIDPGDTVLLSSRIIPGNEKGIYRVIDHLERRDARVIHD 356 Query: 360 D-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-CVPPVR 417 D +HVSGH +L+ M ++P+ + +HG+ HL H ELAL G+ V + Sbjct: 357 DGTNGLIHVSGHGSQEELRLMINLVKPKFFIPVHGDYRHLKRHVELALSTGVPEKVILLE 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G +L L D + +V G D D I R+ L G + ++ Sbjct: 417 DGDVLTLDKDSAQKTGKVTTGRVCIDNNSTADVVEDTVIRDRKHLGEDGLFLPIIAINKR 476 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I G PEI G A D D + + V+ T+ + R+D ++++ I L+ Sbjct: 477 TGAIEGQPEITTRGFAADDPD---LLRNARDIVVRTLEQSSEEERRDYGVMKDKIRGDLK 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 ++K ++PL+ I ++ Sbjct: 534 RFIQKNANRRPLIMPIILEL 553 >gi|227495805|ref|ZP_03926116.1| possible metal-dependent hydrolase [Actinomyces urogenitalis DSM 15434] gi|226834627|gb|EEH67010.1| possible metal-dependent hydrolase [Actinomyces urogenitalis DSM 15434] Length = 544 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 171/554 (30%), Positives = 288/554 (51%), Gaps = 16/554 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM ++ K +++DCGV FP++D PGVDL+ PD + I Sbjct: 1 MRITPLGGLGEVGRNMTVFE----VDGKLLIVDCGVLFPEEDQPGVDLILPDFSSIEDRL 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +P+ S + +EAK R+ + +S Sbjct: 57 DDVVALVLTHGHEDHIGGVPYLLRLRDDIPLVGSDLTLAFVEAKLREHRIRPTLRVVS-- 114 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++V G F +E V VNHSIP+ MA+ IR+ GN++ TGD+K+D I G +TD S Sbjct: 115 EHERVHYGPFDLEFVAVNHSIPDAMAVFIRTGAGNVLATGDFKIDSLPIDGRITDLRSFA 174 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +EG+ DSTNA G E I + + + ++V +FSS V R++ ++ Sbjct: 175 RFADEGVDLFCVDSTNAEVPGMIGHENQIGPVLDGVFAESDQQIIVASFSSHVHRVQQVL 234 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GR++ L+G S+ R + +A + G +K D + + P ++ +++ TGSQG Sbjct: 235 DAAALHGRRVALVGRSMVRNMGIAAEKGYLKVPDGVLIDARDVTSLPADERVLMVTGSQG 294 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ GE R+V + DTVIF+S IPGNE ++ + N+L+ G RV+ + Sbjct: 295 EPMAALSRMAHGEHRSVTVEAGDTVIFASSLIPGNENSVNRVINQLMRLGARVVHQG-NA 353 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y + P+ ++ IHGE HLVA+ LA++ G+ V +G Sbjct: 354 KVHVSGHASSEELLHVYNIVGPRNVMPIHGEIRHLVANGALAVKTGVHPRNVVLCEDGVT 413 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 + L I +V G DG +G+ + + RR L+ G +SV ++ I Sbjct: 414 VDLKDGKARISGQVGCGYVYVDGSSVGEIDETELKDRRILAEEGFVSVYAVVETKTGTIL 473 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I G + + +L V + D +D L++ + + + + Sbjct: 474 AGPDIQARG----MAEDDSVFDDVLDDVTRALQDALDKGNQDAYSLQQVMRRTVGRFVGR 529 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 530 RLKRRPMIVPVVIE 543 >gi|224499713|ref|ZP_03668062.1| hypothetical protein LmonF1_08474 [Listeria monocytogenes Finland 1988] Length = 555 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 266/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPKYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|300788144|ref|YP_003768435.1| mRNA degradation ribonucleases J1/J2 [Amycolatopsis mediterranei U32] gi|299797658|gb|ADJ48033.1| mRNA degradation ribonucleases J1/J2 [Amycolatopsis mediterranei U32] Length = 544 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 173/555 (31%), Positives = 290/555 (52%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG+GE+G NM ++ +G + +++DCGV FP+DD PGVDL+ PD I Sbjct: 1 MRVVALGGIGEVGRNMTVFEFG----GRLLIVDCGVLFPEDDQPGVDLILPDFRAIEDRL 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ + +TH HEDH GA+ L +P+Y S F LL AK R K+ I + Sbjct: 57 DDIEGLVLTHGHEDHIGAVPFLLRLRPDLPIYGSKFTNALLAAKAKEHRQRPKL--IEVR 114 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ DVG F++E VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 115 EGERRDVGVFNLEFFAVNHSIPDALAVAIRTPAGVVLHTGDIKLDQLPLDGRLTDLAGFS 174 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ DSTNA G + E+ I + D+++ V+V F+S V R++ ++ Sbjct: 175 RLGDEGVDLFCVDSTNAEVPGFVMPERDIGPVLDDVVRKVDQRVIVACFASHVHRVQQVL 234 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A++ GR+I +G S+ R + +A D+G++ D L + + P +++ ++TGSQG Sbjct: 235 DAAQRHGRRIAFVGRSMVRNMGIAADLGLLNVPDGLLVDLDQASTLPESKVLFVSTGSQG 294 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE R + + DTV+ +S IPGNE A+ + N L G V+ + Sbjct: 295 EPLSALSRMARGEHRQISIRAGDTVVLASSMIPGNETAVFGVVNGLTRLGANVVHQG-NA 353 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH +L +Y +RP ++ +HGE HL A+ ELA++ G+ V +G + Sbjct: 354 KVHVSGHASAGELLYLYNAVRPSNVMPVHGEWKHLRANGELAIRTGVAPENVVIAEDGVV 413 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L V G DG +G + ++ R L G +S++V +D+ Sbjct: 414 VDLVDGKASRTGRVEVGHVYVDGLSVGDVGESTLSDRLVLGEGGFISISVAVDSSTGRAV 473 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G D K ++ V + D + +++ + + Sbjct: 474 SSPTVSGRGFS----DDPKALAAVVPLVEMELARTEAEGITDTHRIAQAVRRVVGRWVAD 529 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 530 TYRRRPMIVPTVIPV 544 >gi|300172795|ref|YP_003771960.1| ribonuclease J1 [Leuconostoc gasicomitatum LMG 18811] gi|299887173|emb|CBL91141.1| Ribonuclease J1 [Leuconostoc gasicomitatum LMG 18811] Length = 560 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 170/560 (30%), Positives = 277/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+DDL G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QNEIIVVDAGIKFPEDDLLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAISYFLQSVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + I +PVG IV TGD+K D + Sbjct: 123 HEITDGSVLEFDKLSVEFFRTTHSIPDVFGVAIHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSR 239 S+ IG G+L +M DSTNA R SE + K++ I + G ++ TF+S+++R Sbjct: 183 WSMARIGENGVLLMMSDSTNAERPEWTKSEAWVAKSVNRIFDKIEHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDNMLVEQSEIKHIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNQVINKLEEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + + + Sbjct: 363 GKVN-NIHTSGHGGQEEEKLMIALMKPKFFMPVHGEYRMLKVHASLAQELDVPKDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + + DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGENARVAGHFPGDDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + + T+ + + +R+++ L Sbjct: 482 EKEILSGPDILSRGF-VYMRESGDLINEGRRVIFGTMRRVMSNPNVNEADIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP+V + I Sbjct: 541 RFLYKETARKPMVLPMLIMI 560 >gi|163746993|ref|ZP_02154349.1| metallo-beta-lactamase family protein [Oceanibulbus indolifex HEL-45] gi|161379554|gb|EDQ03967.1| metallo-beta-lactamase family protein [Oceanibulbus indolifex HEL-45] Length = 555 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 195/557 (35%), Positives = 311/557 (55%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E ++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDIT Sbjct: 1 MSSERFIYLPLGGAGEIGMNAYVYGYGKPGKERLIVVDLGVAFPDMDSTPGVDLILPDIT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ K R + AIFITHAHEDH GA+ + L P+YA F + K + Sbjct: 61 WLKKRRDQIEAIFITHAHEDHIGAVAHSYEALKAPIYARAFTANIARRKMSEHGHPEDAI 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G F + + ++HSIPE+ A+VI +P G +H+GD+K+D +G+ D Sbjct: 121 TTVSTWPEQITAGPFKVGFLPISHSIPESSAMVIDTPEGRTIHSGDFKIDRTPGVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G+ AL+CDSTN SE + I ++ +A+G V+ TTF+S+V+R Sbjct: 181 DALWADVCKDGVNALICDSTNVFSAHPGRSESTVGPEIEKLVSSAEGMVIATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR IVLLG ++ R+V +I G++K +S E+ PRE L+++ T Sbjct: 241 VKTLAEAGARAGRSIVLLGRAMNRMVEASIQTGVMKDFPPVISPENARAIPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ + ++L E D +FSS+ IPGNE + I N+ E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYQGIELKEGDLFLFSSKTIPGNERGVISIINQFSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ ++ ++PQVL+ +HGE HL H ++A +GI V NG Sbjct: 360 DSSGLYHVSGHANRPDLETLHAIVKPQVLIPMHGEHRHLREHVKIANAKGITGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + ++++ V G DG + D I R +++ GH +V ++LD Sbjct: 419 MMIDLSGNKPKVVEHVDTGRMYLDGSVQVGALDGVIRDRIRMALNGHATVTMILDADDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + +G+P + +L + + + +D L + + R Sbjct: 479 LGDPWVDLMGLPEKGRSNAPLVDVLEQDLSQWLNRQKAATLRDDDKLNDGLKKVARQSSY 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VTV +++++ Sbjct: 539 DEIGKKPEVTVVVSRLN 555 >gi|116872867|ref|YP_849648.1| metallo-beta-lactamase superfamily protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741745|emb|CAK20869.1| metallo-beta-lactamase superfamily protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 555 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 149/550 (27%), Positives = 268/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHIVDSDTTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+I++TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIIYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I+ ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIEIEEDLMVPLKDLKKYNDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTIDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEFKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKTKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|154248537|ref|YP_001419495.1| beta-lactamase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162622|gb|ABS69838.1| beta-lactamase domain protein [Xanthobacter autotrophicus Py2] Length = 556 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 242/554 (43%), Positives = 351/554 (63%), Gaps = 2/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +ELVF PLGGVGEIGMN+ LYG+G +R W+++D G+SF ++ PGVDLV PDI F+ Sbjct: 4 TDELVFAPLGGVGEIGMNLGLYGFGPRKARTWLIVDLGMSFAGEEAPGVDLVLPDIRFLE 63 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 E+K++ + +THAHEDH GA+ DLW L P+Y + F GLLEAKR ++P Sbjct: 64 AEKKHIAGLVLTHAHEDHIGAVLDLWPRLKCPIYTTRFTAGLLEAKRAGEPGAPSQLPIT 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++G VD+G F +E + V HSIP++ AL IR+ G +VHTGDWKLD ++G TD Sbjct: 124 VVRSGGTVDIGPFGVEFIPVAHSIPDSHALAIRTAAGLVVHTGDWKLDPTPVVGLPTDVA 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L A+G+EG+ A++CDSTNA+R+G SE + ++ I+ AK V TTFSS+V+RIR Sbjct: 184 RLKALGDEGVRAIICDSTNAVRDGVSPSEADVAASLRKIVGKAKHRVAFTTFSSNVARIR 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I + A GR++V++G +L+RV+ VA + G++ F + E++G PRE+++ I TGS Sbjct: 244 GIAESAYANGREVVVVGRALERVIGVAREQGLLDGVPAFRTAEAYGYLPREKVVAILTGS 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL +++ + + L+ D V+FSSR IPGNE + HI N L ++GV V+ + Sbjct: 304 QGEQRAALRRIADDDHPEIALSPGDLVVFSSRTIPGNEKVVNHIINALTKRGVEVLTDRK 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 VHVSGHP +L MY+ +RPQV + +HGE LHL H +LA G+ V +G + Sbjct: 364 -ALVHVSGHPRRGELAEMYRMVRPQVSIPVHGEALHLHEHAQLAKSLGVPEVVNCYDGNV 422 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P P E +D+V G KDG L+ I +RR+LSFVG +SV V +D + G Sbjct: 423 IRLAPGPAERVDDVPFGRLYKDGRLLIPDGGRSIPERRKLSFVGAVSVAVAVDRQGGLAG 482 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G+P G + +L TV+ T+ +LP+ RR+D L E++ A+RS + V Sbjct: 483 DPSVEITGVPERGEGGIDMLDHVLDTVVATLDNLPKARRRDPDALAETLERAVRSAVNAV 542 Query: 542 WGKKPLVTVFINKI 555 WGKKP+ V I ++ Sbjct: 543 WGKKPVCHVHILEV 556 >gi|284801820|ref|YP_003413685.1| hypothetical protein LM5578_1575 [Listeria monocytogenes 08-5578] gi|284994962|ref|YP_003416730.1| hypothetical protein LM5923_1527 [Listeria monocytogenes 08-5923] gi|284057382|gb|ADB68323.1| hypothetical protein LM5578_1575 [Listeria monocytogenes 08-5578] gi|284060429|gb|ADB71368.1| hypothetical protein LM5923_1527 [Listeria monocytogenes 08-5923] Length = 555 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 266/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEKTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|227432124|ref|ZP_03914136.1| metallo-beta-lactamase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352151|gb|EEJ42365.1| metallo-beta-lactamase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 560 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 277/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+D+L G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QNEIIVVDAGIKFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGSVLEFDQLSVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 S+ IG G+L +M DSTNA R SE + K++ I K G ++ TF+S+++R Sbjct: 183 WSMARIGENGVLLMMSDSTNAERPEWTKSEAWVAKSVNHIFDKIQHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDDMLVEQSEIKHIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNAVINKLQEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + + + Sbjct: 363 GKVN-NIHTSGHGGQEEEKLMIALLKPKFFMPVHGEYRMLKVHASLAHELEVPEDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + + DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGENARVAGHFPGDDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + + +T+ + +R+++ L Sbjct: 482 KKEILSGPDILSRGF-VYMRESGDLINEGRRVIFSTMRRVMNSSNNSESDIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP++ + + Sbjct: 541 RFLFKKTARKPMIMPMLILV 560 >gi|16800541|ref|NP_470809.1| hypothetical protein lin1473 [Listeria innocua Clip11262] gi|16413946|emb|CAC96704.1| lin1473 [Listeria innocua Clip11262] gi|313623781|gb|EFR93914.1| ribonuclease J 2 [Listeria innocua FSL J1-023] Length = 555 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 151/550 (27%), Positives = 266/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + A + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVDAETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+I++TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIIYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y E++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIIPLKELKKYNDEEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMLNLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKTKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|225873096|ref|YP_002754555.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] gi|225792097|gb|ACO32187.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] Length = 553 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 174/560 (31%), Positives = 290/560 (51%), Gaps = 12/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N +L +PLGG+GE GMN ++ID G+ FP+ +L GVD+V PDIT+ Sbjct: 1 MTNGKLQIIPLGGLGEFGMNCMALR----WQDDIVVIDAGLMFPESELLGVDIVVPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++++ I +TH HEDH G L + S L+VPVY + F + +E K ++ + Sbjct: 57 LIENKEHVRGILLTHGHEDHIGGLPWILSELNVPVYGTEFTLAYVEGKLEEHKMLDETEL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G + +G F+IE +RV HS+ + +AL I +PVG +VHTGD+K+D G D Sbjct: 117 IEMMPGGRFTLGPFTIEPIRVTHSLVDCVALAIETPVGVVVHTGDFKIDLSPPDGKAFDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G G+L L+ DSTN R+G SE +K + +I K + + FSSS+ R+ Sbjct: 177 HKFAEYGKRGVLLLLQDSTNVDRQGYTPSEWSVKPRLDEIFSRTKKKLFFSCFSSSIYRM 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 R +D+A GRK+ ++G S+ +A D+G + + L + + E ++V+ + Sbjct: 237 RIAMDLAFHHGRKVAVIGRSMVESSEIAQDLGYLDIPNGLLIHPGQIADHAPENVMVLIS 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP SAL++ + ++ ++A DTV+ SSR IPGNE +I + + L + VI + Sbjct: 297 GTQGEPMSALSRAAVDNHKHARIAPGDTVLLSSRVIPGNEKSIYRVIDHLYRRDAHVIFD 356 Query: 360 DAECP-VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV-PPVR 417 D +HVSGH + + M +RP+ + +HG+ HL H E+A G+ + + Sbjct: 357 DGHAGLIHVSGHASQEEQRLMINLLRPKFFIPVHGDYRHLKKHAEIAQSMGVVDLAMVIE 416 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L D I V G D DL I RR LS G + + ++ Sbjct: 417 DGDVVELTRDDIRKTGTVTAGRVCIDSGSTADVVEDLVIRDRRHLSEDGFVIPILTINKL 476 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PE++ G D + + + + V T+ + + D +++E I L+ Sbjct: 477 TGMVERQPEVISRGFVGGDPE---LIETARQVVARTLEESSAEEKADYGVIKEKIRIDLK 533 Query: 536 SLLKKVWGKKPLVTVFINKI 555 ++K ++PL+ I +I Sbjct: 534 RYIQKNTSRRPLIMPVILEI 553 >gi|240850598|ref|YP_002971998.1| hypothetical protein Bgr_10470 [Bartonella grahamii as4aup] gi|240267721|gb|ACS51309.1| hypothetical protein Bgr_10470 [Bartonella grahamii as4aup] Length = 558 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 256/553 (46%), Positives = 388/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E VFLPLGGVGEIGMN+A YG+G + R+W+++D G+SF +LPGVDLVFPDI F+ Sbjct: 5 NKNEFVFLPLGGVGEIGMNLAAYGFGPQNLREWLLVDMGISFAGSELPGVDLVFPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L VP+Y +PF GLLE K+ + S+KI Sbjct: 65 ESEKHNIRGLVLTHAHEDHYGAVLDLWPKLQVPIYCTPFTAGLLETKKQLDFESQKILLN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQAGD VG+F++E++ VNHSIPE+++L I + +G ++HTGDWK+D LG VTD+ Sbjct: 125 IFQAGDCFQVGSFAVEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGAVTDEK 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+G +G+LAL+CDSTNA R+G SE+ ++ ++ +I+ A+G V + TFSS++ RIR Sbjct: 185 RFRALGKKGVLALLCDSTNACRDGISPSEQQVQASLSEIISKAEGRVAIATFSSNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE GRK++++G SLKR + VA ++G + F++++ +G R+ L++I TGS Sbjct: 245 SIALAAEAAGRKVLVIGRSLKRSIMVAQELGYMNGLAPFVTEDDYGYISRKDLVLIVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+LSR MRN+ L+ DTVI+SSR+IPGNE AI ++NR ++ G+ +I + Sbjct: 305 QGEPCAALAKLSRDGMRNITLSAGDTVIYSSRSIPGNEKAIIEVQNRFIDLGIEIITNE- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L +MY W++PQ+LV +HGE +HL A LA Q GI V +RNG M Sbjct: 364 DALVHVSGHPRRSELLQMYDWVKPQILVPVHGEAMHLKAQATLARQAGIKIVTDIRNGYM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LR P+P+E++D+V G KDG LIG +LGI +RR+LS+ GH+++++ +++ + + G Sbjct: 424 LRFAPEPVEVVDQVPVGRIYKDGCLIGDENELGIRERRKLSYAGHVTISLHINSKHELLG 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 + G+P +G G + +LL + TV ++P+ ++K+ +L+RE+ A+R+ + ++ Sbjct: 484 DIGLTTFGLPESNGKGESLKDILLDIIENTVYNIPRMKQKNNELIREATRRAVRAAVHEI 543 Query: 542 WGKKPLVTVFINK 554 W KKP+ TVF+++ Sbjct: 544 WQKKPICTVFLHR 556 >gi|92117728|ref|YP_577457.1| beta-lactamase-like [Nitrobacter hamburgensis X14] gi|91800622|gb|ABE62997.1| beta-lactamase-like protein [Nitrobacter hamburgensis X14] Length = 557 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 244/555 (43%), Positives = 362/555 (65%), Gaps = 2/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITF 60 + +EL+F PLGGVGEIGMN+++YG G+ R W+ +D GVSF ++ PG+DL+ PD+ F Sbjct: 4 RPDELMFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDVRF 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + KERKNL+ + +THAHEDH+GA+ +LW L P+YA+ F+ L EAK ER IP Sbjct: 64 LEKERKNLVGLVLTHAHEDHFGAIIELWPRLKCPIYATKFSAALFEAKCAAERNPPDIPV 123 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +GD++D+G F +E V V HSIPE+ AL I + G +VHTGDWK+D I+G TD+ Sbjct: 124 TVVPSGDRIDLGPFGVEFVPVAHSIPESHALAIHTAAGIVVHTGDWKIDPTPIVGPPTDE 183 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+ DSTNA+R+G SE + K I +++K A+G V VTTF+S+V R+ Sbjct: 184 RRLRELGDEGVLALIGDSTNAVRDGRSPSETEVAKTIAELVKAARGRVAVTTFASNVGRL 243 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ D A GR++V++G +++RVV VA + G + Q S + +G P ++++ + TG Sbjct: 244 RAVADAARAAGREVVVVGRAMERVVQVARETGHLDGMQELRSADVYGHLPSDKVLALCTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ALA++++ + V L DTVIFSSR IPGNE A+G I N LV QG++VI + Sbjct: 304 SQGEPRAALARIAKDDHPQVTLNRGDTVIFSSRTIPGNERAVGAIINGLVTQGIKVITDR 363 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++L+ M W+RPQ+L+ +HGE LHL H +LA G+ V +NG Sbjct: 364 TE-LVHVSGHPRRDELRDMIAWVRPQLLIPVHGEALHLSEHAQLARAAGVPKVLICKNGD 422 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL P IIDE+ G KDG ++ + +RR+++F G + V + + + Sbjct: 423 LVRLGPGDPGIIDELPSGRLYKDGAILEDSKSRAVVERRRMAFAGCVFVAIAVTEKGELA 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEI +GIP + G I ++ T+++TV LP+ RR+D + ES+ A+R+++ + Sbjct: 483 DDPEIDLVGIPEKNTVGEVIDDIVFDTIVSTVKALPRTRRRDPDAMAESLRRAVRAVVAE 542 Query: 541 VWGKKPLVTVFINKI 555 WGKKPL V + I Sbjct: 543 EWGKKPLCYVHVLLI 557 >gi|297197107|ref|ZP_06914504.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|297146591|gb|EFH28226.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 655 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 164/541 (30%), Positives = 283/541 (52%), Gaps = 17/541 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NM ++ + K +++DCGV FP++ PGVD++ PD T I Sbjct: 19 LRVIALGGLGEIGRNMTVFEHA----GKLLVVDCGVLFPEETQPGVDVILPDFTSIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +PV S + LEAK + + + + Sbjct: 75 DDIVAVVLTHGHEDHIGGVPYLLRERSDIPVVGSKLTLAFLEAKLKEHGIRPRTVRV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD+ G F +E V VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 133 EGDRRGFGPFDLEFVAVNHSIPDSLAVAIRTGAGMVLHTGDFKMDQFPLDDRITDLRAFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G SE+ + I +M+ A V+V++F+S V RI+ ++ Sbjct: 193 RLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A Q GRK+ +G S+ R + +A D+G +K L ++ + P ++ ++ TGSQG Sbjct: 253 DAAHQHGRKVAFVGRSMVRNMGIARDLGYLKVPSGLVVNTKELEKLPDHKITLVCTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++ + DTV+ +S IPGNE AI + N L G V+ + Sbjct: 313 EPMAALSRMANRDH-QIRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH +L Y ++P+ ++ +HGE HL A+ +LA++ G+ V +G + Sbjct: 371 KVHVSGHASAGELVYCYNIVKPRNVMPVHGEWRHLRANADLAIRTGVDPDHVVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 + L I +V G DG +G + + R L+ G ++V ++D + Sbjct: 431 VDLVDGRASITGKVPAGNVYVDGMEVGGATEASLKDRLTLAEEGVVTVVAIVDADTGALA 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+ + G D + + T+ + D + L + ++ A+ + + Sbjct: 491 EAPDFLARGFVHDDATFEPVVP----VIEKTLATAAEEGVGDARQLEQLLARAVANWAFR 546 Query: 541 V 541 Sbjct: 547 T 547 >gi|16803474|ref|NP_464959.1| hypothetical protein lmo1434 [Listeria monocytogenes EGD-e] gi|47095385|ref|ZP_00232995.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|224501625|ref|ZP_03669932.1| hypothetical protein LmonFR_03752 [Listeria monocytogenes FSL R2-561] gi|254827722|ref|ZP_05232409.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254829807|ref|ZP_05234462.1| hypothetical protein Lmon1_00560 [Listeria monocytogenes 10403S] gi|254898400|ref|ZP_05258324.1| hypothetical protein LmonJ_01255 [Listeria monocytogenes J0161] gi|254912109|ref|ZP_05262121.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254936436|ref|ZP_05268133.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|16410863|emb|CAC99512.1| lmo1434 [Listeria monocytogenes EGD-e] gi|47016206|gb|EAL07129.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258600101|gb|EEW13426.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258609028|gb|EEW21636.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|293590077|gb|EFF98411.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 555 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 266/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|295397875|ref|ZP_06807937.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] gi|294973855|gb|EFG49620.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] Length = 557 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 170/560 (30%), Positives = 287/560 (51%), Gaps = 12/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ GG+ EIG N YG + +++D GV FP+DDL G+D V + + Sbjct: 5 IKNNEVGVFAFGGLDEIGKN----SYGVQFQDEILLLDAGVKFPEDDLLGIDYVIANYQY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + +FITH HEDH G + L +++P+YA A+ L++ K + + Sbjct: 61 LIQNEQKVKGLFITHGHEDHIGGIPFLLKQINIPIYAGKLAMALIKNKLEEHGLLRDAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + S+ R HSIP+ M +V+++P GN+V TGD+K D + D Sbjct: 121 HIIDEDSVIKFRKTSVSFYRTTHSIPDAMGIVVKTPPGNVVFTGDYKFDFTPVG-KPADI 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG EG+L L+ DSTNA G SE+ + +++ DIM N +G ++ +F+S++SR+ Sbjct: 180 HKMAKIGEEGVLLLLGDSTNAEIPGFTQSERVVGESLADIMSNIEGRIIFASFASNISRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ID+A GRKI + G S++ + AI++G + F+ YP +++++ T Sbjct: 240 SQAIDVAVAQGRKIAVFGRSMEAAIRNAIELGYFNVGEDAFIQSNEINQYPANEILIMCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N+L+ G VI Sbjct: 300 GSQGEPMAALSRIANGTHRQISIQPDDTVIFSSSPIPGNTLSVNHVINQLLAAGAEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 VH SGH + K M ++P+ + +HGE L E A GI + ++ Sbjct: 360 KVN-NVHTSGHGGQQEQKLMLSLMKPKYFMPVHGEYRMLSIQAEQAELVGIPHENIFIMQ 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L L D DG IG ++ + R LS G + V +D Sbjct: 419 NGEVLALTQDSARRAGSFPGEAVYVDGKGIGDIGNIVLRDRHNLSEDGLVLAVVSVDFTK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT-VVDLPQFRRKDLKLLRESISSALR 535 + P+IV G Y + + + K + TT + L ++ + K+LR+++ +AL+ Sbjct: 479 NELLAGPDIVSRGF-IYMRESVGLIQDAQKVIRTTVIGHLNSGKKVNEKILRDAMQNALQ 537 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K + P++ + + Sbjct: 538 PFLYKRTKRNPMIMAVVMPV 557 >gi|116618717|ref|YP_819088.1| mRNA degradation ribonuclease J1/J2enzyme [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097564|gb|ABJ62715.1| RNase J1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 560 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 277/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+D+L G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QNEIIVVDAGIKFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGSVLEFDQLSVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 S+ IG G+L +M DSTNA R SE + K++ I K G ++ TF+S+++R Sbjct: 183 WSMARIGENGVLLMMSDSTNAERPEWTKSEAWVAKSVNHIFDKIQHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDDMLVEQSEIKHIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNAVINKLQEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + + + Sbjct: 363 GKVN-NIHTSGHGGQEEEKLMIALLKPKFFMPVHGEYRMLKVHASLAHELEVPEDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + + DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGENARVAGHFPGDDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + + +T+ + +R+++ L Sbjct: 482 KKEILSGPDILSRGF-VYMRESGDLINEGRRVIFSTMRRVMNSSNNSESDIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP++ + + Sbjct: 541 RFLFKETARKPMIMPMLILV 560 >gi|315499806|ref|YP_004088609.1| RNA-metabolising metallo-beta-lactamase [Asticcacaulis excentricus CB 48] gi|315417818|gb|ADU14458.1| RNA-metabolising metallo-beta-lactamase [Asticcacaulis excentricus CB 48] Length = 555 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 208/555 (37%), Positives = 318/555 (57%), Gaps = 4/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +ELVFLPLGG EIGMN+ YG+G RKWI++D GV+F PG++++ PD F+ Sbjct: 4 NKDELVFLPLGGSNEIGMNLNAYGFGPEHDRKWILVDVGVTFGDLTTPGIEVIVPDPKFL 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + +THAHEDH GAL LW + P+YA+PF L+ K V Sbjct: 64 E--GEEILGVILTHAHEDHIGALGWLWDRIKAPLYATPFTAFLIREKLREAGVE-DFDLT 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G KV +G F I+ + + HSIPE L I++P+G ++HTGDWK+D D I G TD Sbjct: 121 EVPLGGKVHLGPFEIDYITITHSIPEPNGLSIKTPLGTVLHTGDWKIDPDPITGKPTDIS 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + A+G+EG+LA++CDSTN +G SE +K ++ +++ G V V F+S+V+R+ Sbjct: 181 RIVALGDEGVLAMVCDSTNVFVDGQAGSEADVKVSLEAVIRTLTGRVAVACFASNVARMD 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+I AE GR + L+G S+ R+ + A VG++K Q F+S+ +++ + TGS Sbjct: 241 SVIRAAEACGRSVCLVGRSMHRMAAAAKFVGLMKGVQEFVSEAEAVKMKDTEVLYLCTGS 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+AL++++ G V+L D+ +FSSR IPGNE+AI ++NRL + GV + E Sbjct: 301 QGEPRAALSRIADGNHPLVRLGAGDSCVFSSRVIPGNEIAIRSLQNRLSDLGVEIHTEKD 360 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP ++LK+MY W RP++ + HGE HL H LA + GI +RNG M Sbjct: 361 HPGIHVSGHPCRDELKQMYAWARPKIAIPTHGERRHLQKHAALAAEIGIPEQVVLRNGDM 420 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P EIIDEV G DG ++ A + +RR + G L V+ L++ + Sbjct: 421 VRLAPGKPEIIDEVPSGRLFVDGGMLVPEASEALRERRHAAHNGMLFVSFALNSKNQLAS 480 Query: 482 VPEIVDIGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 E+ +G+ D D + L V L + R D + + +++ L+ + Sbjct: 481 YVEVRGLGLAFEDEDSISDQLEKLCDLAEKAVQKLSREERDDDQTVETAVARVLKKAAQN 540 Query: 541 VWGKKPLVTVFINKI 555 WG++P+V I ++ Sbjct: 541 TWGRRPIVETIILRL 555 >gi|191638302|ref|YP_001987468.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei BL23] gi|227535211|ref|ZP_03965260.1| metallo-beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631613|ref|ZP_04674644.1| mRNA degradation ribonuclease J1/J2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066354|ref|YP_003788377.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei str. Zhang] gi|190712604|emb|CAQ66610.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei BL23] gi|227187095|gb|EEI67162.1| metallo-beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526078|gb|EEQ65079.1| mRNA degradation ribonuclease J1/J2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438761|gb|ADK18527.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei str. Zhang] gi|327382329|gb|AEA53805.1| Beta-lactamase [Lactobacillus casei LC2W] gi|327385530|gb|AEA57004.1| Beta-lactamase [Lactobacillus casei BD-II] Length = 560 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 273/560 (48%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG NM YG + I+ID G+ FP+DDL G+D V D ++ Sbjct: 5 IKNNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ + + A+ ITH HEDH G + + +VP+YA P A L+ K + + Sbjct: 61 LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVT 178 + S+E R HSIP+T+ + + +P G ++ TGD+K D + Sbjct: 121 LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C EG+L LM DSTNA SE+ + K+I I G ++ TF+S++S Sbjct: 181 NFQKMCRFAEEGVLVLMSDSTNAEVPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI D A GRKI + G S++ + ++G + D + + P ++++++ Sbjct: 241 RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLIDAHQLNSMPADKVMIL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN V++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH D K M + I+P+ +A HGE H ELA Q G+ Sbjct: 361 HGKVN-NVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCYI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG +L L D I G DG +G + I RR LS G + V ++ Sbjct: 420 MENGDVLALTQDSARIAGHFPAGDVYIDGNGVGDIGNAVIRDRRMLSEEGLVVVVATINM 479 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + P+++ G Y + G++ + V T+ + L+++I+S Sbjct: 480 QKQAVLAGPDLLSRGF-IYMRESGELINQAQRRVYRTIKSTFSSSEKVTEASLKDAITSN 538 Query: 534 LRSLLKKVWGKKPLVTVFIN 553 L+ L + P++ + Sbjct: 539 LQEFLFDKTERHPVILPMLI 558 >gi|157165115|ref|YP_001467823.1| peptide ABC transporter, periplasmic peptide-binding protein [Campylobacter concisus 13826] gi|112801726|gb|EAT99070.1| metallo-beta-lactamase family protein [Campylobacter concisus 13826] Length = 717 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 162/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG NM ++ + I++D G+SFP + + GVD++ PD ++ Sbjct: 165 SEHKIRITPLGGLGEIGGNMTVFE----TETSAIIVDIGMSFPSESMHGVDILIPDFDYV 220 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 K + + + ITHAHEDH GA+ + P+YA+P +G++ K + ++ Sbjct: 221 RKIKDKIKGVIITHAHEDHIGAVPYFYKEFKFPIYATPLPLGMINNKFEEHGLKQERSLF 280 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 S + +G F +E + + HSI + AL I + G I+HTGD+K+D I G TD Sbjct: 281 RSVEKRKPYLIGDFEVEWIHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTDL 340 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G G+L L+ DSTN+ +EG SE + K I AKG V+++TFSS++ R+ Sbjct: 341 GRLAYYGERGVLCLLSDSTNSYKEGFTKSESSVGKTFDAIFSKAKGRVIMSTFSSNIHRV 400 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ + RK+ ++G S++R + A+++G IK ++F+ G + ++++++ T Sbjct: 401 YQAIEWGLKYNRKVCVIGRSMERNLYTAMELGYIKLDKKIFIDANEVGKFKDDEVLIVTT 460 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D +I SS+AIPGNE ++ + N L++ G V + Sbjct: 461 GSQGETMSALYRMATDEHKYIKIKPTDQIIISSKAIPGNENSVSTVLNFLLKSGASVAYQ 520 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D +HVSGH + K M + I+P+ + +HGE H+ HKE A+ G+ + + Sbjct: 521 DF-SEIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIAKHKETAISCGVDERNIYLMS 579 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + ++ + V G D + + AD + R+ L+ G + + + H Sbjct: 580 DGDQMEVCQKYLKRVKTVKTGKVFIDNQINKQIADDVVIDRQNLAEAGVVMIIAQISRHG 639 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P ++ G+ D K + + + ++ + KD +LL + +R Sbjct: 640 AKLINKPRVISYGLVGDKQDAE-FRKEMEGVLEQYLSNVKEELLKDSRLLESQVRQVIRK 698 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 699 HIFRKVKKYPTIVPII 714 >gi|199598168|ref|ZP_03211590.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus rhamnosus HN001] gi|258539519|ref|YP_003174018.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] gi|199590929|gb|EDY99013.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus rhamnosus HN001] gi|257151195|emb|CAR90167.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] Length = 560 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 170/560 (30%), Positives = 273/560 (48%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG NM YG + I+ID G+ FP+DDL G+D V D ++ Sbjct: 5 IKNNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ + + A+ ITH HEDH G + + +VP+YA P A L+ K + + Sbjct: 61 LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVT 178 + S+E R HSIP+T+ + + +P G ++ TGD+K D + Sbjct: 121 LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C EG+L LM DSTNA SE+ + K+I I G ++ TF+S++S Sbjct: 181 NFQKMCRFAEEGVLVLMSDSTNAEIPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI D A GRKI + G S++ + ++G + D + + P ++++++ Sbjct: 241 RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLVDAHQLNSLPADKVMIL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN V++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH D K M + I+P+ +A HGE H ELA Q G+ Sbjct: 361 HGKVN-NVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCFI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG +L L I G DG +G + I RR LS G + V ++ Sbjct: 420 MENGDVLALTEKSARIAGHFPAGDVYIDGSGVGDIGNAVIRDRRMLSEEGLVVVVATINM 479 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + P+++ G Y + G++ + V T+ + L+++I+S+ Sbjct: 480 QKQAVLAGPDLLSRGF-IYMRESGELINQAQRRVYRTIKSTFSNNEKVTEATLKDAITSS 538 Query: 534 LRSLLKKVWGKKPLVTVFIN 553 L+ L + P++ + Sbjct: 539 LQEFLFDKTERHPVILPMLI 558 >gi|320106083|ref|YP_004181673.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis SP1PR4] gi|319924604|gb|ADV81679.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis SP1PR4] Length = 557 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 188/564 (33%), Positives = 300/564 (53%), Gaps = 16/564 (2%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M N++ L +PLGG+GE GMN Y I+ID G+ FP+D+L GVD+V P Sbjct: 1 MNNDKNVDKLKVIPLGGLGEFGMNCMAIRY----KDDIIVIDAGLMFPEDELLGVDIVVP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 DIT++++ R + I +TH HEDH G L + + L+VPVY + F + +E K ++ Sbjct: 57 DITYLLENRAMVRGILLTHGHEDHIGGLPRILTELNVPVYGTEFTLTYVEGKLEEHKLLD 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I G++ ++G F+I+ +RV HS+ + +AL +R+PVG IVHTGD+K+D + G Sbjct: 117 GADLIEMVPGERFNIGPFNIQPIRVTHSLVDCVALAVRTPVGTIVHTGDFKIDLSSPDGK 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D S +G EG+L L+ DSTN R G E ++ + +I AK + + FSSS Sbjct: 177 PFDLHSFAELGKEGVLLLLQDSTNCDRPGYTPGELAVRPRLDEIFSRAKRRLFFSCFSSS 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLI 295 + RI+ +D+A Q GRK+ L+G S+ +A D+G I + L + +P E++ Sbjct: 237 IHRIKLAMDLAHQHGRKVALIGRSMDNATEIAQDLGYINPPEGLLIHSGQIRDFPPEKVC 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V+ +G+QGEP SAL++ + ++ K+ DTV+ SSR IPGNE +I + + L + + Sbjct: 297 VMISGTQGEPMSALSRAAVDNHKHAKIEAGDTVLLSSRVIPGNEKSIFSMIDHLYRRNAK 356 Query: 356 VIAED-AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 VI +D A +HVSGH +L+ M +RP+ V +HG+ HL H E+A I Sbjct: 357 VIYDDGASGLIHVSGHASQEELRLMINLLRPKFFVPVHGDYRHLTRHIEVATSTTIPERC 416 Query: 415 PV-RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKF-ADLGIAKRRQLSFVGHLSVNVL 472 + +G++L L + +V G L D D+ I R+ LS G + + Sbjct: 417 ILIEDGEVLELDANSATKTGKVTSGRVLIDSGSTSDVIEDIIIRDRKHLSEAGLVLAIIS 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 +D G EIV G + +H K + T+ ++D L++E I Sbjct: 477 IDKMTGRQEGTAEIVTRGFAV---NEEGMHAEARKIIQRTLETSSDEEKRDWMLIKEKIR 533 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 + L+ ++K G++P+V I +I Sbjct: 534 ADLKRYIQKNTGRRPMVMPVILEI 557 >gi|313773557|gb|EFS39523.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] Length = 573 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 299/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 22 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 77 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 78 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 137 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++ F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 138 LNVVHESDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 197 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 198 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 257 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 258 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 317 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 318 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 377 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 378 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 436 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 437 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 496 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 497 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 552 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 553 GRWVSRSLRRRPMIVPVVVKI 573 >gi|260426164|ref|ZP_05780143.1| metallo-beta-lactamase family protein [Citreicella sp. SE45] gi|260420656|gb|EEX13907.1| metallo-beta-lactamase family protein [Citreicella sp. SE45] Length = 555 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 192/557 (34%), Positives = 308/557 (55%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M + +++LPLGG GEIGMN +YGYG P + + I++D GV+FP D PGV+++F DI Sbjct: 1 MTTQRIIYLPLGGAGEIGMNCYVYGYGEPGAERLIVVDLGVAFPDMDTTPGVNIIFADIA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R+ + A+FITHAHEDH GA+ + L V +YA F L K S++ Sbjct: 61 WLEQNRERIEAVFITHAHEDHIGAVGHCFERLGVRIYARAFTANLARQKLAEYGYSEETV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + VG F + + ++HSIPE+ ALVI +P G ++H+GD+KLD ++G+ D Sbjct: 121 KTCSKWPETTKVGPFEVGFLPISHSIPESSALVIDTPGGRVIHSGDFKLDPSPVVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + G+ AL+CDSTN SE + NI +++ A V+ TTF+S+V+R Sbjct: 181 PELWAEVSAGGVKALVCDSTNVFSPNPGRSESEVGPNIEELVSAAPQMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR I LLG +++R++ AI+ G++ +S E PR+ L++I T Sbjct: 241 VKTLAEAGSKAGRSICLLGRAMRRMIEAAIETGVLTGFPKVVSPEEAAEIPRDNLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ ++L E D +FSS+ IPGNE + I N E+GV V+ + Sbjct: 301 GSQGERRAASAQLSRGKYNGIELKEGDLFLFSSKTIPGNEKDVIRIMNNFSERGVDVVDD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 HVSGH DL R++ + PQ+++ +HGE HL H +LA G A V NG Sbjct: 361 SG-GKYHVSGHANGPDLVRLHDIVSPQIVIPMHGEHRHLREHVKLAKARGRAGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + + + + G DG + D + R +++ GH+ V V+LD Sbjct: 419 MMIDLSGNEPTVAEWIDAGRTYLDGSVQIGALDGIVRDRIRMALNGHVIVTVILDEDDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+P + +L + + + +D L E + +R+ + Sbjct: 479 LGEPWCEVMGLPEIGRSNAPLVDVLEEDLSQYLGRAGDKALRDDDKLEEDMRRIVRNSSQ 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VTV +++++ Sbjct: 539 NEIGKKPEVTVIVSRLN 555 >gi|229552103|ref|ZP_04440828.1| metallo-beta-lactamase [Lactobacillus rhamnosus LMS2-1] gi|229314536|gb|EEN80509.1| metallo-beta-lactamase [Lactobacillus rhamnosus LMS2-1] Length = 560 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 272/560 (48%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG NM YG + I+ID G+ FP+DDL G+D V D ++ Sbjct: 5 IKNNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ + + A+ ITH HEDH G + + +VP+YA P A L+ K + + Sbjct: 61 LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVT 178 + S+E R HSIP+T+ + + +P G ++ TGD+K D + Sbjct: 121 LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C EG+L LM DSTNA SE+ + K+I I G ++ TF+S++S Sbjct: 181 NFQKMCRFAEEGVLVLMSDSTNAEIPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI D A GRKI + G S++ + ++G + D + + P ++++++ Sbjct: 241 RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLVDAHQLNSLPADKVMIL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN V++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH D K M + I+P+ +A HGE H ELA Q G+ Sbjct: 361 HGKVN-NVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCFI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG +L L I G D +G + I RR LS G + V ++ Sbjct: 420 MENGDVLALTEKSARIAGHFPAGDVYIDDSGVGDIGNAVIRDRRMLSEEGLVVVVATINM 479 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + P+++ G Y + G++ + V T+ + L+++I+S+ Sbjct: 480 QKQAVLAGPDLLSRGF-IYMRESGELINQAQRRVYRTIKSTFSNNEKVTEATLKDAITSS 538 Query: 534 LRSLLKKVWGKKPLVTVFIN 553 L+ L + P++ + Sbjct: 539 LQEFLFDKTERHPVILPMLI 558 >gi|217964418|ref|YP_002350096.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|217333688|gb|ACK39482.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|307571017|emb|CAR84196.1| metallo-beta-lactamase family protein [Listeria monocytogenes L99] Length = 555 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 265/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|296111663|ref|YP_003622045.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] gi|295833195|gb|ADG41076.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] Length = 560 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 170/560 (30%), Positives = 276/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+DDL G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QNEIIVVDAGIKFPEDDLLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAISYFLQSVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGSILEFDQLSVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSR 239 S+ IG G+L +M DSTNA R SE + K++ I + G ++ TF+S+++R Sbjct: 183 WSMARIGENGVLLMMSDSTNAERPEWTKSEAWVAKSVNRIFDKIEHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDNMLVEQSEIKHIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNQVINKLEEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + I + Sbjct: 363 GKVN-NIHTSGHGGQEEEKLMIALMKPKYFMPVHGEYRMLKVHASLAHELEIPKDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + + DG IG + + R++LS G + V +D Sbjct: 422 ENGDVLALDGESARVAGHFPGEDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDLK 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G Y + G + + + T+ + +R+++ L Sbjct: 482 KKEILSGPDILSRGF-VYMRESGDLINEGRRIIFGTMRRVMNNANVSEADIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP+V + I Sbjct: 541 RFLYKETARKPMVLPMLIMI 560 >gi|294083727|ref|YP_003550484.1| putative hydrolase of the metallo-beta-lactamase superfamily [Candidatus Puniceispirillum marinum IMCC1322] gi|292663299|gb|ADE38400.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Candidatus Puniceispirillum marinum IMCC1322] Length = 559 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 207/557 (37%), Positives = 317/557 (56%), Gaps = 6/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +F+PLGG GEIGMN+ LY Y W+M+D G+SFP + PG+D+V PD+ FI Sbjct: 5 SKSDFLFVPLGGSGEIGMNVNLYHY----QDSWLMVDLGISFPDESTPGIDVVLPDLQFI 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K R L + +TH HEDH GA+ LWS L P++ S F + LL K R IP Sbjct: 61 QKHRDKLAGLVLTHGHEDHLGAIPYLWSSLGCPIWGSAFTLALLRRKLAESRNDYDIPLH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +GAF IE + +NHSIP+ AL IR+ G ++HTGDWK D +LG TDKD Sbjct: 121 EMGMNAVEKIGAFEIEMIGLNHSIPDPAALAIRTDAGLVLHTGDWKFDKTPVLGTDTDKD 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G+EG+L ++ DSTNAM G SE + + D + A G V VT F+S+++RI Sbjct: 181 RLAKLGDEGVLVMVGDSTNAMVAGHTGSEAEARDGLTDAIGAATGRVAVTCFASNIARID 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI+ A+ R + ++G +L R +S A +VG + F+ + L PRE +++I TG+ Sbjct: 241 SIVKAAQANDRSVAIVGRALNRAISAAREVGYLLDLPEFVPEGDINLLPRENVVIICTGT 300 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+A+A+++ G V L DTVI+SSR IPGNE AI +++ LV + + +I ++ Sbjct: 301 QGEPRAAMAKIAAGAHETVSLDPGDTVIYSSRKIPGNENAISRVQDMLVRRKINLITDE- 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + PVHVSGHP +++ MY +RP++ + +HG HLVAH ELA + NG + Sbjct: 360 DAPVHVSGHPSRDEMVEMYGLVRPKIAIPVHGTARHLVAHAELAESCQVPQTILPDNGAV 419 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 ++L + ++IID V G + I + RR++ + G ++V+++L+ NI Sbjct: 420 IKLNDETVKIIDNVHTGAMTHERGSIIDMQADMLRARRRMLWNGSVTVSLVLNRTGNICM 479 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 VP + G+ D I L V V L + RK+ + E A+R + + + Sbjct: 480 VPAVSQTGLGEGDKADDYIAAASL-AVEDAVEQLGKSARKNDDSVEEVSGQAVRRVARSM 538 Query: 542 WGKKPLVTVFINKISRQ 558 +G +P+ V I +++++ Sbjct: 539 FGLRPITHVHIMRVNQE 555 >gi|46907662|ref|YP_014051.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47092724|ref|ZP_00230510.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|226224035|ref|YP_002758142.1| hypothetical protein Lm4b_01444 [Listeria monocytogenes Clip81459] gi|254824506|ref|ZP_05229507.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|254932619|ref|ZP_05265978.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|300765576|ref|ZP_07075555.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|46880930|gb|AAT04228.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018912|gb|EAL09659.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225876497|emb|CAS05206.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293584178|gb|EFF96210.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|293593745|gb|EFG01506.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|300513677|gb|EFK40745.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|328465480|gb|EGF36709.1| hypothetical protein LM1816_06035 [Listeria monocytogenes 1816] gi|328474953|gb|EGF45747.1| hypothetical protein LM220_03127 [Listeria monocytogenes 220] gi|332311875|gb|EGJ24970.1| hypothetical hydrolase of the metallo-beta-lactamase [Listeria monocytogenes str. Scott A] Length = 555 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 149/550 (27%), Positives = 265/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A+F+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|290894102|ref|ZP_06557075.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|290556357|gb|EFD89898.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] Length = 555 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 265/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKLKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|116629819|ref|YP_814991.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus gasseri ATCC 33323] gi|238853988|ref|ZP_04644345.1| ribonuclease J 1 [Lactobacillus gasseri 202-4] gi|311110539|ref|ZP_07711936.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] gi|116095401|gb|ABJ60553.1| RNase J1 [Lactobacillus gasseri ATCC 33323] gi|238833433|gb|EEQ25713.1| ribonuclease J 1 [Lactobacillus gasseri 202-4] gi|311065693|gb|EFQ46033.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] Length = 559 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 279/561 (49%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+GEIG NM Y + I++DCG+ FP+DD+ G++ V D ++ Sbjct: 3 LKNNEVGVFAIGGLGEIGRNMYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + Sbjct: 59 LVKNRKKIKALVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVVFTGDFKFDLTPVMSQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ Sbjct: 179 DFQKMAKLGQEGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVDTGRKVAIFGRSMENGVQNGIDLGYLNIPEGTLVDANEINHTPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN ++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGTHRQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VH SGH + K M + +P+ + +HGE V H E A G+ Sbjct: 359 HGKIH-NVHTSGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMAKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG +L L D I + D ++ + R+ L+ G + V +D Sbjct: 418 LKNGDVLALTKDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + ++ + + +R++I Sbjct: 478 KHQRVLAGPDILSRGF-VYMRESTELISQAQKHVYHILKTEMAKDPQPKENEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSKTERRPMILPMLIE 557 >gi|170781605|ref|YP_001709937.1| hypothetical protein CMS_1199 [Clavibacter michiganensis subsp. sepedonicus] gi|169156173|emb|CAQ01314.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 560 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 293/561 (52%), Gaps = 19/561 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K L P+GG+GEIG NM + K +++DCGV FP++ PGVDL+ PD + Sbjct: 11 LKPGILRITPIGGLGEIGRNMTTFEI----DGKILVVDCGVLFPEEHQPGVDLILPDFSS 66 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ I +TH HEDH GA+ L +P+ S + L+EAK R++ Sbjct: 67 IADRLDDVVGIVLTHGHEDHIGAVPYLLKLKQDIPLIGSGLTLALIEAKLKEHRITPYTF 126 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + GD+ +G F +E V VNHSIP+ +A+ I + G+++HTGD+K+D + +TD Sbjct: 127 QV--KEGDRERLGPFELEFVAVNHSIPDALAVAITTEAGSVLHTGDFKMDQLPLDDRITD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G GI M DSTNA G +E+ I + ++ A V+V +FSS V R Sbjct: 185 LRAFARLGEAGIDLFMSDSTNADVPGFTPTERSIGPVLEAVISKAPRRVIVASFSSHVHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GR++ +G S+ R +++A ++G +K + + + + P +Q++ ++ Sbjct: 245 VQQVLDAAHANGRRVAFIGRSMIRNMTIAAELGYLKVPEGVLIDSKKAVNLPDDQIVYMS 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + L++++ E +++ + DTVI +S IPGNE A+ + N L + G V+ Sbjct: 305 TGSQGEPMAVLSRMANLEH-QIEIGQDDTVILASSLIPGNENAVYRVINGLTKLGANVVH 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HLVA+++LA+Q G+ Sbjct: 364 KA-NAKVHVSGHAAAGELLYCYNILKPRNVLPVHGEYRHLVANQQLAIQTGVPERNTFLA 422 Query: 417 RNGKMLRLFPDPIEIIDE--VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +G +L + + + + V + DG +G+ D + RR LS G +++ V+++ Sbjct: 423 EHGTVLDMKDGHVRVTGQLDVGYVYVYVDGSTVGEITDADLKDRRILSEEGFVTIFVVVE 482 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 PEI G + K+ + V+ + + +D + + Sbjct: 483 PQTGKAIIGPEIEARGFA----EDSKVFDSVKPLVVKALAEAAANGTRDTHAYSQVVRRT 538 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 539 VGRWVNSSHRRRPMIIPVVIE 559 >gi|329947470|ref|ZP_08294672.1| hypothetical protein HMPREF9056_02587 [Actinomyces sp. oral taxon 170 str. F0386] gi|328524749|gb|EGF51804.1| hypothetical protein HMPREF9056_02587 [Actinomyces sp. oral taxon 170 str. F0386] Length = 544 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 170/554 (30%), Positives = 290/554 (52%), Gaps = 16/554 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM ++ K +++DCGV FP++D PGVDL+ PD + I Sbjct: 1 MRITPLGGLGEVGRNMTVFE----LEGKLLIVDCGVLFPEEDQPGVDLILPDFSSIEDRI 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +P+ S + +EAK R+ + + Sbjct: 57 DDVVALVLTHGHEDHIGGVPYLLRLRDDIPLVGSELTLAFVEAKLKEHRIRPVLRQVV-- 114 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++V G F +E V VNHSIP+ MA++IR+ GN++ TGD+K+D I G +TD S Sbjct: 115 EHEEVSYGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITDLRSFA 174 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG+ DSTNA G E I + + ++ ++ G ++V +F+S V R++ ++ Sbjct: 175 RFGEEGVDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIIVASFASHVHRVQQVL 234 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQG 303 D A GR++ L+G S+ R + +A + G +K + P + +++ TGSQG Sbjct: 235 DAAALHGRRVALVGRSMVRNMGIAAERGYLKVPGGVLIDARDITSLPPHERVLMVTGSQG 294 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ E R+V + DTVIF+S IPGNE ++ + N+L+ G RV+ + Sbjct: 295 EPMAALSRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVHQG-NA 353 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L +Y ++P+ ++ IHGE HLVA+ LA++ G+A V +G Sbjct: 354 KVHVSGHASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGVAPERVMLCEDGVA 413 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 + L I +V G DG +G+ + + RR L+ G +SV ++ I Sbjct: 414 VDLDGGVARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETTTGTIL 473 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ D +I + + + + + D L++ + L + + Sbjct: 474 AGPHIQARGMAEDDSVFEEILPDVTEALSAALET----GKADAYSLQQVMRRTLGRWIGR 529 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 530 RLKRRPMIVPVVIE 543 >gi|327440994|dbj|BAK17359.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Solibacillus silvestris StLB046] Length = 555 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 148/557 (26%), Positives = 273/557 (49%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + +PLGGVGEIG +M + + ++D G+ FP+D++ G+D+V PDIT++ Sbjct: 5 KNELIRVIPLGGVGEIGKSMYVIEI----DEELFVVDSGLMFPEDEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + IF+TH HED G++ + + PVY S I L + ++ Sbjct: 61 EENKDRVKGIFLTHGHEDAIGSIAYVLKKIKAPVYGSKLTIALAKEHLKELPAPYQVKFF 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +++ + + HSIP+++ +V + G IVHTG++K D A D Sbjct: 121 EVSSNSRMNFNSTYVTFFHTTHSIPDSLGIVFHTSEGAIVHTGEFKFDQSATGKFKPDLA 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+ L+ +S A R G SE I + + +A G ++V ++S+ RI+ Sbjct: 181 KMAMLGEEGVFMLLSESMEAERPGYTTSEAVIAEELQKTFHSAPGRIIVALYASNFIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATG 300 + A RK+ ++G SL+++V + +++G ++ D+ + Y +++I++ATG Sbjct: 241 QVFRQAAASHRKVAVVGKSLEKMVDIGVNLGYLEIDESTLVPVNEIHKYHDDEIIIMATG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++GEP AL ++ R R++K+ DTV+ + P EV + + N+L + G V+ Sbjct: 301 NKGEPLDALDKIVRKHHRDIKIRNTDTVLITFTPSPSMEVQMYNTMNQLAKAGAHVMT-- 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + VHVSGH DLK M +++P+ + + GE L+AH +LA Q G+ + Sbjct: 359 SNKKVHVSGHGSAEDLKLMLNFMKPKYFIPVQGEYRMLIAHSKLAQQVGLQKSQIFIADK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 419 GDIVEYKNGKVRMTGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRAQK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + ++ + + + + +++ I L Sbjct: 479 KIASGPEILSRGF-VYVRESEQLMEEASEIAREVIEKYVGKETFEWTNIKQEIRDTLNQY 537 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 538 LFQKTKRRPMIIPIIME 554 >gi|258508306|ref|YP_003171057.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|257148233|emb|CAR87206.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|259649623|dbj|BAI41785.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 560 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 272/560 (48%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E +GG+GEIG NM YG + I+ID G+ FP+DDL G+D V D ++ Sbjct: 5 IKKNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ + + A+ ITH HEDH G + + +VP+YA P A L+ K + + Sbjct: 61 LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVT 178 + S+E R HSIP+T+ + + +P G ++ TGD+K D + Sbjct: 121 LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C EG+L LM DSTNA SE+ + K+I I G ++ TF+S++S Sbjct: 181 NFQKMCRFAEEGVLVLMSDSTNAEIPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI D A GRKI + G S++ + ++G + D + + P ++++++ Sbjct: 241 RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLVDAHQLNSLPADKVMIL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN V++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH D K M + I+P+ +A HGE H ELA Q G+ Sbjct: 361 HGKVN-NVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCFI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG +L L I G DG +G + I RR LS G + V ++ Sbjct: 420 MENGDVLALTEKSARIAGHFPAGDVYIDGSGVGDIGNAVIRDRRMLSEEGLVVVVATINM 479 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + P+++ G Y + G++ + V T+ + L+++I+S+ Sbjct: 480 QKQAVLAGPDLLSRGF-IYMRESGELINQAQRRVYRTIKSTFSNNEKVTEATLKDAITSS 538 Query: 534 LRSLLKKVWGKKPLVTVFIN 553 L+ L + P++ + Sbjct: 539 LQEFLFDKTERHPVILPMLI 558 >gi|116491239|ref|YP_810783.1| mRNA degradation ribonuclease J1/J2enzyme [Oenococcus oeni PSU-1] gi|290890784|ref|ZP_06553851.1| hypothetical protein AWRIB429_1241 [Oenococcus oeni AWRIB429] gi|116091964|gb|ABJ57118.1| RNase J1 [Oenococcus oeni PSU-1] gi|290479556|gb|EFD88213.1| hypothetical protein AWRIB429_1241 [Oenococcus oeni AWRIB429] Length = 573 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 177/563 (31%), Positives = 286/563 (50%), Gaps = 11/563 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++N E+ + LGG+GEIG N Y + ++ID G+ FP+DDL GVD V PD T+ Sbjct: 17 LENNEVGVMALGGLGEIGKNTYAIQY----QDEIVVIDAGIMFPEDDLLGVDYVIPDYTY 72 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + A+ ITH HEDH GA+ ++VPVYA PFA+ L++ K + KK Sbjct: 73 LVQNIEKVKALVITHGHEDHIGAISYFLRAVNVPVYAPPFALALIKGKLEEHNLLKKTEL 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +D G S+E + HSIP+T+ + + +P G IV TGD+K D + D Sbjct: 133 HEIKPDSFLDFGKLSVEFFQTTHSIPDTVGVAVHTPKGTIVETGDFKFDLTPVTNQYPDM 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 + IG EG+L LM DSTNA R SE ++K+I I + KG ++ TF+S++SR Sbjct: 193 LKMAKIGREGVLLLMSDSTNAERPEFTKSEAWVQKSIERIFDRITKGRIIFATFASNLSR 252 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ +D A + GRKI + G S++ V+ D+G + D+ L P ++ ++++ Sbjct: 253 VKMAMDSAVRHGRKIAVFGRSMETAVNNGRDLGYLNISDEFLLEPSDLKNTPPDETLILS 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + +KL DTV+FSS IPGN ++ + N L E G VI Sbjct: 313 TGSQGEPMAALARIANGTHKQIKLQPNDTVVFSSNPIPGNTASVNKVINELEEGGANVIY 372 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M + ++P+ + IHGE L H LA G+ + + Sbjct: 373 GPLN-NIHTSGHGGQEEQKIMLELMKPKFFMPIHGEYRMLKIHSGLAQSTGVPSDHIFIM 431 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + DG IG + + +R++LS G + V ++ Sbjct: 432 DNGDVLALDGEHAHPAGHFSSEDIYVDGGGIGDVGNAVLHERQKLSQDGLVIVTATINMQ 491 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+++ G Y + + + T+ D +R+++ L Sbjct: 492 TKEILSGPDLLSRGF-VYMRESVDLINDGRRVAFGTIRKAMMSSNADEGSIRQAVIDELS 550 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 L K +KP+V + ++ Sbjct: 551 HYLYKKTARKPIVIPVLIQVKSN 573 >gi|300811301|ref|ZP_07091798.1| ribonuclease J 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497665|gb|EFK32690.1| ribonuclease J 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 559 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+ EIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKQNEVAVFAIGGLHEIGRNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ ++H HEDH G + L + +PVYA+PFA+ L+++K + + Sbjct: 59 LVKNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + + R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+LAL+ DSTNA SE+ + ++++I+ +G ++ TF+S++ Sbjct: 179 NFQRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVAGSLHNIITGIEGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + L + E+ P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLNVPEGLIVDAEAINSLPPEKVMLL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R +KL DTVIFSS IPGN +++ + N+L+E G +V+ Sbjct: 299 CTGSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTLSVNQLINKLMEGGAKVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKLMVELTKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG+++ P+ I ++ D ++ + R+ LS G + +D Sbjct: 418 LKNGEVVCFSPEGARIAGDIHVKDVFVDTSGAADVGNIVVRDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K V + ++ + + +R++I Sbjct: 478 KHKQVLAGPDILSRGF-VYMRESQDLINAAQKHVYHVLKTEMAKSDKPKDSEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSRTERRPMILPMLVE 557 >gi|295131017|ref|YP_003581680.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Propionibacterium acnes SK137] gi|291375736|gb|ADD99590.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Propionibacterium acnes SK137] Length = 563 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 299/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 12 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 67 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 68 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 127 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++ F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 128 LNVVHESDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 187 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 188 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 247 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 248 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 307 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 308 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 367 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 368 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 426 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 427 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 486 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 487 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 542 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 543 GRWVSRSLRRRPMIVPVVVKI 563 >gi|182679337|ref|YP_001833483.1| beta-lactamase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635220|gb|ACB95994.1| beta-lactamase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 556 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 237/552 (42%), Positives = 357/552 (64%), Gaps = 1/552 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ELVF+PLGG+GEIGMN ALYG+G + RKWI +DCG++F + G+DL+ P+ FI K Sbjct: 6 NELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNPAFIEK 65 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R++L+AI +THAHEDH GAL DLW L P+YA+ FA LLEAKR+ E + +P ++ Sbjct: 66 LRQDLVAIIVTHAHEDHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDVPLLTV 125 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G+ + + F+IE + + HSIPE+ AL IR+ G ++H+GDWK+D + LG TD L Sbjct: 126 DQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAGTLIHSGDWKIDAEPGLGKETDAKRL 185 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG+EG+LAL+ DSTN +REG SE + + + DI+ NA G V+VTTF+S+V+RIR++ Sbjct: 186 TEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVARIRAV 245 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + A R +VL+G +++RVV +A D+G + LFLS +++ PR++++V+ATGSQG Sbjct: 246 AEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLATGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+A+A+++ GE + V L+ D VIFSSR IPGNE +G I N+ + GV VI + Sbjct: 306 ESRAAIARIAEGEHQIVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVITDR-NA 364 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VH SGHP +++++Y+W+RP++ V HGE +HL H AL+ G V RNG ++ Sbjct: 365 LVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLAEHARFALEHGAEQVVRARNGDLVV 424 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P II EV G KDG + K D + R++L+F G +++ + + ++ GVP Sbjct: 425 LAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDLAGVP 484 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 ++V G+P DG I ++ + + T LP+ +R+D L+ +I A+R+ + WG Sbjct: 485 DVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVAAAWG 544 Query: 544 KKPLVTVFINKI 555 KKP V V + ++ Sbjct: 545 KKPAVHVLVIEV 556 >gi|224368802|ref|YP_002602963.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] gi|223691518|gb|ACN14801.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] Length = 549 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 191/554 (34%), Positives = 312/554 (56%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+NM ++ YG ++ID G+ FP+D + GVD+V P++ ++ + R Sbjct: 2 LKIIPLGGLGEIGLNMMVFEYG----DTIVVIDAGLMFPEDYMLGVDIVIPEMEYLRENR 57 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+ +THAHEDH GA+ L V VY +PF + +++ K + Sbjct: 58 DRLKAVVLTHAHEDHIGAIAYLLKEFPVSVYGTPFTLSVVKNKLREFDILNMAELNVVMP 117 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D++ +GAF IE +RV+HS + + L IR+PVG IVHTGD++++ + + TD Sbjct: 118 LDRIKIGAFDIEFIRVSHSTVDVVGLAIRTPVGMIVHTGDFRINHCFDMSNCTDISRFAK 177 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G EG+LAL+ DSTNA ++G S++ +K+++ I+ ++G VL+ F+S+V RIR IID Sbjct: 178 CGEEGVLALLSDSTNAEKDGYTESDQIVKESLAKIVARSEGRVLIALFASNVFRIRQIID 237 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQGE 304 IA + RKIVL G S+++ V++A ++G + + L +P ++++VI TGSQGE Sbjct: 238 IALKNNRKIVLNGRSIEQTVAIAKELGYLDWPEHMSLDLRKVNSFPDDKIMVITTGSQGE 297 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL++++ G + + + + DTVI SS++IPGNE AI +I N L +G V+ + Sbjct: 298 PMSALSRMATGFHKQLNIKKGDTVILSSKSIPGNEKAISNIINNLYRRGAEVVHDKI-AK 356 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RNGKML 422 VHVSGH +LK M ++P+ + IHGE HLV H LA ++GI + NG ++ Sbjct: 357 VHVSGHACREELKLMINLVKPKYFIPIHGEYRHLVIHARLAEKQGIPRHRVLAAENGNVI 416 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI-FG 481 +I +V G L DG IG + +RR LS G + V++++D I Sbjct: 417 CFDDKGAKIDGQVYTGRVLIDGKGIGDVGRSVLKERRNLSEDGLVVVSMIIDEETGIVLY 476 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE+V G + + G + ++ V ++ + ++R + AL+ Sbjct: 477 GPELVSKGF-VFGAETGYLVDDAQCVILEIVEEVEVGSESRVDVIRSRLQKALKQYFFFT 535 Query: 542 WGKKPLVTVFINKI 555 ++PL+ I ++ Sbjct: 536 IRRRPLILPIIIEV 549 >gi|271963699|ref|YP_003337895.1| hypothetical protein Sros_2169 [Streptosporangium roseum DSM 43021] gi|270506874|gb|ACZ85152.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 561 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 173/555 (31%), Positives = 296/555 (53%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GEIG NMA++ Y + ++IDCGV FP+ D PG+DL+ PD +I Sbjct: 19 LRIVALGGLGEIGRNMAVFEY----EGRLLIIDCGVLFPEPDQPGIDLILPDFEYIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S + L+EAK R+ + Sbjct: 75 DDVEAVVLTHGHEDHIGAVPYLLRERRDIPVVGSKLTLALIEAKLTEHRIQPSKLEVV-- 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ G F E VNHSIP+ +A+ +R+P G ++HTGD+++D G +TD Sbjct: 133 EGERHQFGPFECEFFAVNHSIPDALAVAVRTPAGIVLHTGDFRMDQLPSDGRLTDLGGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ LM DSTNA G SE+ I I ++++ A+ V+V +F+S V R++ ++ Sbjct: 193 RLGAEGVDLLMSDSTNAEVPGFVTSEREIAPVIDEVVRTAQKRVIVASFASHVHRVQQVM 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ L+G S+ R + +A D+G +K L + + +P E +++I TGSQG Sbjct: 253 DAAHKHGRKVALVGRSMVRNMGIARDLGYLKVPPGLIVDSKEIETWPPEDVVLICTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ + +++AE DTV+ +S +PGNE ++ + N L G RV+ + Sbjct: 313 EPMAALSRMANRDHP-IRVAEGDTVLLASSLVPGNETSVNKVINGLARWGARVVHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L + RP + +HGE H+ AH ++A+ G+ + +G + Sbjct: 371 KVHVSGHAAAGELLYLLNVTRPSNFMPVHGEWRHMRAHAKIAVLSGVPDDHIVIAEDGVV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L +I+ + G DG +G D + RR L G +SV +++D + + Sbjct: 431 VDLLDGRAKIVGAIPAGYVYVDGTSVGDVTDYALKDRRILGEEGFISVVLVVDTANGKLA 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G PEI G D D + ++ + V + D++ +R + + + Sbjct: 491 GGPEIHARG-SGIDPDR---LEEVIPQIEKAVEEHTADGVMDVQQIRRVVRRTVGRWVSD 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMIIPVVIEV 561 >gi|118586754|ref|ZP_01544191.1| metallo-beta-lactamase superfamily protein [Oenococcus oeni ATCC BAA-1163] gi|118432842|gb|EAV39571.1| metallo-beta-lactamase superfamily protein [Oenococcus oeni ATCC BAA-1163] Length = 573 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 176/563 (31%), Positives = 286/563 (50%), Gaps = 11/563 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++N E+ + LGG+GEIG N Y + ++ID G+ FP+DDL GVD V PD T+ Sbjct: 17 LENNEVGVMALGGLGEIGKNTYAIQY----QDEIVVIDAGIMFPEDDLLGVDYVIPDYTY 72 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + A+ ITH HEDH GA+ ++VPVYA PFA+ L++ K + KK Sbjct: 73 LVQNIEKVKALVITHGHEDHIGAISYFLRAVNVPVYAPPFALALIKGKLEEHNLLKKTEL 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +D G S+E + HSIP+T+ + + +P G IV TGD+K D + D Sbjct: 133 HEIKPDSFLDFGKLSVEFFQTTHSIPDTVGVAVHTPKGTIVETGDFKFDLTPVTNQYPDM 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 + IG EG+L LM DSTNA R SE ++K++ I + KG ++ TF+S++SR Sbjct: 193 LKMAKIGREGVLLLMSDSTNAERPEFTKSEAWVQKSVERIFDRITKGRIIFATFASNLSR 252 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ +D A + GRKI + G S++ V+ D+G + D+ L P ++ ++++ Sbjct: 253 VKMAMDSAVRHGRKIAVFGRSMETAVNNGRDLGYLNISDEFLLEPSDLKNTPPDETLILS 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + +KL DTV+FSS IPGN ++ + N L E G VI Sbjct: 313 TGSQGEPMAALARIANGTHKQIKLQPNDTVVFSSNPIPGNTASVNKVINELEEGGANVIY 372 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K M + ++P+ + IHGE L H LA G+ + + Sbjct: 373 GPLN-NIHTSGHGGQEEQKIMLELMKPKFFMPIHGEYRMLKIHSGLAQSTGVPSDHIFIM 431 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + DG IG + + +R++LS G + V ++ Sbjct: 432 DNGDVLALDGEHAHPAGHFSSEDIYVDGGGIGDVGNAVLHERQKLSQDGLVIVTATINMQ 491 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+++ G Y + + + T+ D +R+++ L Sbjct: 492 TKEILSGPDLLSRGF-VYMRESVDLINDGRRVAFGTIRKAMMSSNADEGSIRQAVIDELS 550 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 L K +KP+V + ++ Sbjct: 551 HYLYKKTARKPIVIPVLIQVKSN 573 >gi|218782205|ref|YP_002433523.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763589|gb|ACL06055.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 560 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 303/558 (54%), Gaps = 10/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +PLGG+GEIG+NM ++ Y +++D G+ FP+D + GVD+V PD ++ Sbjct: 9 KSIPLKIIPLGGLGEIGLNMTVFEY----DGVILVVDSGLMFPEDYMLGVDIVIPDYEYL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + I +TH HEDH GAL L + PVYA+PF I L+ K + + ++ Sbjct: 65 RENKERVAGIVLTHCHEDHIGALPFLLKDIPAPVYATPFTIALVSHKLEEKDLLSRVDLH 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +G F IE VR +HS+ + ++L IR+P G IVHTGD+K+ + + TD Sbjct: 125 KIKPRESFSIGPFHIEFVRASHSVVDGVSLAIRTPAGLIVHTGDFKITHGQLDDEATDVS 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G EG+LAL+ DSTNA +EG +SE I + ++++ G V+V F+S+V R+ Sbjct: 185 RLAQLGEEGVLALLSDSTNAEKEGYTLSESEIGATLEKAVRDSSGRVIVALFASNVPRLA 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I++IA + G+KIV G S++ + +A ++G I + + Y +++++ TG Sbjct: 245 QIVNIAAKTGKKIVFNGRSIEVSMRIAQELGYINVPPGMQIDVSEVKNYEDNEVLLVTTG 304 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SALA+++ G + +K+ + DTVI SS+ IPGNE AI I N L +G VI E Sbjct: 305 SQGEPMSALARVAAGAHKQIKIRDGDTVILSSKFIPGNEKAITGIINNLYRRGAEVIYEK 364 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +HVSGH + +LK M RP+ + +HGE HL+ H LA + GI + +N Sbjct: 365 ISA-IHVSGHAFREELKLMMHLTRPRYFMPVHGEYRHLLHHARLAEKVGIPKNRILLAQN 423 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + I + V G DG IG + RR LS G + ++LD + Sbjct: 424 GNVINFMDEVGWIGESVDTGRTFVDGKGIGDVGRKVLKDRRALSEHGMVVATMVLDFDTG 483 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE++ G ++ + G + + ++ V L + L+ + ALR Sbjct: 484 VVIYGPELLSRGF-VFEDEKGHLLQDAQCVIMDAVEQLDLSGPDRIPLIEAATQQALRRF 542 Query: 538 LKKVWGKKPLVTVFINKI 555 V ++P++ + ++ Sbjct: 543 FNYVIRRRPVIVPLVLEV 560 >gi|255323626|ref|ZP_05364756.1| ribonuclease J [Campylobacter showae RM3277] gi|255299340|gb|EET78627.1| ribonuclease J [Campylobacter showae RM3277] Length = 707 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 287/555 (51%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLGG+GEIG NM ++ + I++D G+SFP + + GVD++ PD ++ Sbjct: 156 DHRIRITPLGGLGEIGGNMTIFE----TDTSAIIVDIGMSFPSESMHGVDILIPDFDYVR 211 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPCI 121 K + + + ITHAHEDH GA+ + P+YA+P +G++ K + ++ Sbjct: 212 KIKDKIKGVVITHAHEDHIGAVPYFYKEFKFPIYATPLPLGMINNKFEEHGLKQERSLFR 271 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +G F +E + + HSI + AL I + G I+HTGD+K+D I G TD Sbjct: 272 SVEKRKPYLIGDFEVEWIHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTDLG 331 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G G+L LM DSTN+ REG SE + K I AKG V+++TFSS++ R+ Sbjct: 332 RLAYYGERGVLCLMSDSTNSYREGFTKSESSVGKTFDAIFSKAKGRVIMSTFSSNIHRVY 391 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ID + RK+ ++G S++R + A+++G IK ++F+ G + +++++ TG Sbjct: 392 QAIDWGLKYNRKVCVIGRSMERNLYTAMELGYIKLDKKIFIDANEVGKFKDNEVLIVTTG 451 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E + +K+ D +I SS+AIPGNE ++ + N L++ G V +D Sbjct: 452 SQGETMSALYRMATDEHKYIKIKPTDQIIISSKAIPGNESSVSTVLNFLIKSGASVAYQD 511 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH + K M + I+P+ + +HGE H+ HKE A+ G+ + + + Sbjct: 512 F-SEIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIAKHKETAVACGVDERNIYLMSD 570 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G + + ++ V G D + + +D + R+ L+ G + + + H Sbjct: 571 GDQIEICQKYMKRAKTVKTGKVFIDNQINKQISDDVVIDRQNLAEAGVVMIIAQISRHGA 630 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P ++ G+ DG K + + + ++ + KD ++L + +R Sbjct: 631 KLINKPRVISYGLVGDKQDGE-FRKEMEGVLEQYLSNVKEELLKDGRILEGQVRQVIRKH 689 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 690 IFRKVKKYPTIVPII 704 >gi|300361477|ref|ZP_07057654.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] gi|300354096|gb|EFJ69967.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] Length = 559 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 279/561 (49%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+GEIG NM Y + I++DCG+ FP+DD+ G++ V D ++ Sbjct: 3 LKNNEVGVFAIGGLGEIGRNMYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + Sbjct: 59 LIKNRKKIKALVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ Sbjct: 179 DFQKMAKLGQEGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVDTGRKVAIFGRSMENGVQNGIDLGYLNIPEGTLVDANEINHTPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN ++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGTHRQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VH SGH + K M + +P+ + +HGE V H E A G+ Sbjct: 359 HGKIH-NVHTSGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMAKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG +L L D I + D ++ + R+ L+ G + V +D Sbjct: 418 LKNGDVLALTKDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + ++ + + +R++I Sbjct: 478 KHQRVLAGPDILSRGF-VYMRESTELISQAQKHVYHILKTEMAKDPQPKENEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSKTERRPMILPMLIE 557 >gi|22537900|ref|NP_688751.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76798238|ref|ZP_00780487.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77409378|ref|ZP_00786078.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|22534797|gb|AAN00624.1|AE014271_19 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76586391|gb|EAO62900.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77172019|gb|EAO75188.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] Length = 559 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|293381226|ref|ZP_06627233.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|312977574|ref|ZP_07789321.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus CTV-05] gi|290922194|gb|EFD99189.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|310895313|gb|EFQ44380.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus CTV-05] Length = 559 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+D+L G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDNLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + K++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGNEGVLALLSDSTNAEVTQFTKSERFVAKSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V +D+G + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGVDLGYLNLPKDLIVDADEINKLPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQISLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGADVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + ++P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLVKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ PD I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPDGARITGHIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + R ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSNRPKESDIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|326803661|ref|YP_004321479.1| ribonuclease J 1 [Aerococcus urinae ACS-120-V-Col10a] gi|326650845|gb|AEA01028.1| ribonuclease J 1 [Aerococcus urinae ACS-120-V-Col10a] Length = 557 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 284/559 (50%), Gaps = 12/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ E+ +GG+GEIG NM + Y + I++D GV FP D+L G+D V D +++ Sbjct: 6 KDNEVYVFAIGGLGEIGKNMYVVQY----QDEIIIMDNGVKFPDDELLGIDYVISDYSYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + IF++H HEDH G + L ++ P+YA A+ L+ K + Sbjct: 62 IENKDKVKGIFVSHGHEDHIGGIPWLLKQVNFPIYADQLALALIRGKLEEHGLLGDAILH 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ S+ VNHSIP +++++PVG + TGD+K D I D Sbjct: 122 EIDDESVINFDKTSVSFFTVNHSIPGAKGILVKTPVGAVAFTGDYKFDFTPIG-KHADLH 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+L L+ DSTN+ G +SE + ++ DIM +G ++ +F+S++SR+ Sbjct: 181 KMARIGDEGLLLLLADSTNSEVPGWTMSEHYVSNSLKDIMTPIEGRIIFASFASNISRLS 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+IA GRKI + G S++ A ++G + F+ + YP +++++ TG Sbjct: 241 EAIEIAVNTGRKIAVFGRSMENAFRNAQEIGYFNIPEGTFIESKEINDYPDNEIMIMCTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL++++ G R V L DTV+FSS IPGN ++ ++ N+L+E G V+ Sbjct: 301 SQGEPLAALSRIANGTHRQVTLHPTDTVVFSSSPIPGNLSSVNNLINKLLESGAEVVHGK 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VH SGH K + + ++P+ + +HGE L H E A G+ V N Sbjct: 361 IN-NVHTSGHASQEQQKLLLRLMKPKFFMPVHGEYRMLCVHGETAQAVGVPEKNVIIHDN 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G++ L D +V DG IG ++ + R LS G + V V ++ + Sbjct: 420 GQVAALTQDSWREAGKVPADAVYVDGKGIGDIGNIVLRDRHNLSEDGIVIVVVTVNFENN 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT-VVDLPQFRRKDLKLLRESISSALRS 536 + P+IV G Y + G + K K V TT + L + + K+LR+SI +AL Sbjct: 480 ELVAGPDIVSRGF-IYMRESGDLIKDAQKVVQTTVIGHLNSGKEVNEKILRDSIQNALYP 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 L K + P++ I + Sbjct: 539 FLHKRTKRNPMILPVIMPV 557 >gi|313811610|gb|EFS49324.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313831353|gb|EFS69067.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313834963|gb|EFS72677.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|314974227|gb|EFT18323.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976662|gb|EFT20757.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314984470|gb|EFT28562.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|315095367|gb|EFT67343.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|327328371|gb|EGE70133.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA2] gi|327444155|gb|EGE90809.1| hypothetical protein HMPREF9571_02286 [Propionibacterium acnes HL043PA2] gi|327444964|gb|EGE91618.1| hypothetical protein HMPREF9570_02026 [Propionibacterium acnes HL043PA1] gi|328760124|gb|EGF73703.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL099PA1] Length = 557 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 299/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 6 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 61 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 62 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++ F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 122 LNVVHESDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 182 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 242 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 301 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 302 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 362 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 420 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 421 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 480 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 481 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 536 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 537 GRWVSRSLRRRPMIVPVVVKI 557 >gi|315038070|ref|YP_004031638.1| metallo-b-lactamase superfamily protein [Lactobacillus amylovorus GRL 1112] gi|312276203|gb|ADQ58843.1| metallo-b-lactamase superfamily protein [Lactobacillus amylovorus GRL 1112] gi|327183350|gb|AEA31797.1| metallo-b-lactamase superfamily protein [Lactobacillus amylovorus GRL 1118] Length = 560 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + K Sbjct: 59 LVKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIKGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAKLGNEGVLALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + L + + P ++++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGIDLGYLHVPKDLIVDADEINKLPPDKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA + G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLTKPKYMIPVHGEYRMQVIHTQLAQEAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPNGARIAGRIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSDKPKESEIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|227889776|ref|ZP_04007581.1| metallo-beta-lactamase [Lactobacillus johnsonii ATCC 33200] gi|227849640|gb|EEJ59726.1| metallo-beta-lactamase [Lactobacillus johnsonii ATCC 33200] Length = 559 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 161/561 (28%), Positives = 276/561 (49%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+GEIG NM Y + I++DCG+ FP+DD+ G++ V D ++ Sbjct: 3 LKNNEVGVYAIGGLGEIGRNMYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + K RK + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + Sbjct: 59 LAKNRKKIKALVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G ++ TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVLFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ Sbjct: 179 DFQEMAKLGKEGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVDTGRKVAIFGRSMENGVQNGIDLGYLDIPEGTLVDANEINHTPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN ++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGTHRQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 VH SGH + K M + +P+ + +HGE V H E A Sbjct: 359 HGKIH-NVHTSGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMPKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG +L L D I + D ++ + R+ L+ G + V +D Sbjct: 418 LKNGDVLALTRDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + ++ + + +R++I Sbjct: 478 KHQRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLKTEMAKDPQPKENEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSKTERRPMILPMLIE 557 >gi|258652452|ref|YP_003201608.1| beta-lactamase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555677|gb|ACV78619.1| beta-lactamase domain protein [Nakamurella multipartita DSM 44233] Length = 580 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 176/560 (31%), Positives = 294/560 (52%), Gaps = 16/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L + LGG+GEIG NM +Y + + +++DCGV FP+D PGVDL+ PD+ Sbjct: 32 LAKDALRVVALGGIGEIGRNMTVYEF----DGRLLIVDCGVLFPEDGQPGVDLILPDLRL 87 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + ++ A+ ITH HEDH GAL L +PV + F++ L+ AK R++ + Sbjct: 88 VEDRIDDIDAVVITHGHEDHIGALPWLLRLRPDLPVLGARFSLALIAAKCREHRLTPTLQ 147 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G++ G F + VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 148 VVT--EGERRKAGPFDLRFYAVNHSIPDALAVSIRTPAGTVLHTGDIKLDQLPLDGRLTD 205 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G++G+ + DSTNA G E+ I + + A V+V +F+S V R Sbjct: 206 LGGFARLGDKGVDLFLVDSTNAEVPGFVAPEREIGPVMDSFIAKATQRVIVASFASHVHR 265 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A + GRK+ +G S+ R + +A ++G++ D L S + P +Q+++++ Sbjct: 266 VQQMLDSAYRHGRKVAFVGRSMVRNMQIAQELGLLTVPDGLVRSLDKVLELPPDQVMLVS 325 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL+++SRGE R V L DTVI +S IPGNE ++ I N L + GV V+ Sbjct: 326 TGSQGEPLSALSRMSRGEHRQVNLTAGDTVILASSMIPGNETSVFTIINELAKIGVTVVH 385 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L +Y ++P+ ++ +HGE HL A +LA+ G+ V Sbjct: 386 QGV-AKVHVSGHASAGELLYLYNAVKPRNVIPVHGEWRHLRAQAKLAIATGVPEDRVILA 444 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L ++ V G+ DG +G D ++ R L G +S+ V +D+H Sbjct: 445 PNGTVVDLVRGRASVVGHVEVGMVYVDGNAVGDVGDNTLSDRLVLGEGGFISITVAIDSH 504 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 P I G D K ++ V + D + +++ + Sbjct: 505 TGRAIASPTISGRGFS----DDPKALHAVVPLVEAELSRTEADGVTDPHRVAQAVRRVVG 560 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + + Sbjct: 561 RWVGDTYRRRPMIVPTVLAV 580 >gi|42518917|ref|NP_964847.1| hypothetical protein LJ0991 [Lactobacillus johnsonii NCC 533] gi|41583203|gb|AAS08813.1| hypothetical protein LJ_0991 [Lactobacillus johnsonii NCC 533] Length = 559 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 161/561 (28%), Positives = 277/561 (49%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+GEIG NM Y + I++DCG+ FP+DD+ G++ V D ++ Sbjct: 3 LKNNEVGVYAIGGLGEIGRNMYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + Sbjct: 59 LVKNRKKIKALVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G ++ TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVLFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ Sbjct: 179 DFQEMAKLGKEGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVDTGRKVAIFGRSMENGVQNGIDLGYLDIPEGTLVDANEINHTPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN ++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGTHRQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 VH SGH + K M + +P+ + +HGE V H E A Sbjct: 359 HGKIH-NVHTSGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMPKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG +L L D I + D ++ + R+ L+ G + V +D Sbjct: 418 LKNGDVLALTRDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + ++ + + +R++I Sbjct: 478 KHQRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLKTEMAKDPQPKENEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSKTERRPMILPMLIE 557 >gi|330719249|ref|ZP_08313849.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc fallax KCTC 3537] Length = 560 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 276/560 (49%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GEIG N Y + I++D G+ FP+D+L G+D V PD T+ Sbjct: 7 IKPNEVAVYALGGLGEIGKNTYGIEY----QDEIIVVDAGIMFPEDELLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + A+ ITH HEDH GA+ ++VPVYA P A+ L++ K +++ ++ Sbjct: 63 LVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQMLNRVEL 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G ++ S+E R HSIP+ + + +PVG IV TGD+K D + Sbjct: 123 HEITDGSLLEFDKVSVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPPNL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSR 239 S+ IG G+L +M DSTNA R SE + K++ + K G ++ TF+S+++R Sbjct: 183 WSMAKIGENGVLLMMSDSTNAERPEWTKSEAWVAKSVNRLFDKMPHGRIIFATFASNMNR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ V+ +G + D + P ++L++++ Sbjct: 243 VRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDDAIVEQNEIKNIPDDELLILS 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G + ++L KD VIFSS IPGN ++ + N+L E G VI Sbjct: 303 TGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNAVINKLEEGGANVIY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 +H SGH + K M ++P+ + +HGE L H LA + + Sbjct: 363 GKMN-NIHTSGHGGQEEQKLMLALMKPKYFMPVHGEYRMLRVHAGLAHELDMPEDHTFIL 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + I DG IG + + R++LS G + +D Sbjct: 422 ENGDVLALDGESTRIAGHFPAEDTYIDGSGIGDIGSVVLHDRQKLSQDGLVIATATIDLT 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I P+I+ G Y + G++ + + TT+ + +R+++ L Sbjct: 482 NKEILSGPDILSRGF-IYMRESGELINEGRRVIFTTIRKAMMRKDATESDIRQAVIDDLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L K +KP++ + + Sbjct: 541 RFLYKETARKPMILPMLIMV 560 >gi|56697598|ref|YP_167967.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3] gi|56679335|gb|AAV96001.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3] Length = 555 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 200/556 (35%), Positives = 314/556 (56%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M E L++LPLGG GEIGMN +YGYG P + I++D GV+F D PGVDL++ DI+ Sbjct: 1 MSRERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDMGVAFSDMDTTPGVDLIWADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L A+FITHAHEDH GA+ + L P++A F + K + ++ Sbjct: 61 WLRENVDRLEAVFITHAHEDHVGAVAHTYDQLRKPIHARAFTANIARRKMSELGLPEQAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++V G F++ + V+HS+PE+ ALVI +P G IVH+GD+KLD ++G+ D Sbjct: 121 QTVSAWPEQVQAGPFTVGFLPVSHSVPESAALVIDTPAGRIVHSGDFKLDPSPVVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + ++G G+ AL+CDSTN SE + I ++ A G V+ TTF+S+V+R Sbjct: 181 PELWGSVGKSGVRALVCDSTNVFSPNPGRSESEVGPEIEKLVAGASGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 +R++ + + GR +VLLG +++R++ +++ G++ + +S E PR+ L++I T Sbjct: 241 VRTLAEAGARAGRSVVLLGRAMRRMIEASMETGVLTEFPPVISPEEAQDIPRDHLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ R ++LAE D +FSS+ IPGNE + I N+L E+GV V+ + Sbjct: 301 GSQGERRAASAQLARGKYRGLELAEGDLFLFSSKTIPGNEKEVIRIINQLSEKGVDVV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL R++ I PQ+++ +HGE HL H LA G V NG Sbjct: 360 DSSGRYHVSGHANRPDLARVHALIDPQMVIPMHGEHRHLREHARLAEAGGRQGV-VAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ML L + ++ V G DG + D I R +++ GH++V V+LD Sbjct: 419 TMLDLSGNAPKVAAHVETGRTYLDGTVQVGALDGVIRNRIRMALNGHVTVTVILDEEDEP 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P +G+P + ++ + + ++ Q +D L E++ R + Sbjct: 479 LGEPWCDIMGLPEIGSSKAPLVDVMEEDLNQFLMRSNQKTLRDDDRLEEALRRIARQTAQ 538 Query: 540 KVWGKKPLVTVFINKI 555 GKKP VTV I+++ Sbjct: 539 AEIGKKPEVTVVISRM 554 >gi|152965755|ref|YP_001361539.1| beta-lactamase domain protein [Kineococcus radiotolerans SRS30216] gi|151360272|gb|ABS03275.1| beta-lactamase domain protein [Kineococcus radiotolerans SRS30216] Length = 561 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 283/558 (50%), Gaps = 17/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L + LGG+GEIG NM ++ + K +++DCGV FP++ PG+D++ PD T Sbjct: 14 LAKDALRVVALGGLGEIGRNMTVFEHA----GKLLIVDCGVLFPEEHQPGIDVILPDFTS 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++AI +TH HEDH G + L +P+ S + + AK R+ Sbjct: 70 IRDRLDDVVAIVLTHGHEDHIGGVPYLLRERPDIPLVGSRLTLAFITAKLTEHRIRP--V 127 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD+ G F E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD Sbjct: 128 TVEVTEGDQRRFGPFDCEFVAVNHSIPDGLAVAIRTAAGLVLHTGDFKMDQFPLDGRITD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G SE + I + + + V+V++F+S V R Sbjct: 188 LRGFARLGEEGVDLFLTDSTNAEVPGFTASEGELIPAIETVFRKSPRRVIVSSFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ ++D A GRK+ +G S+ R + +A ++G +K L + + P ++ ++ Sbjct: 248 IQQVLDAAAAHGRKVAFVGRSMVRNMGIAAELGYLKIPAGLVVDLKVLEKLPPSKVTLVC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G+ +++ E DTV+ +S IPGNE A+ + N L G V+ Sbjct: 308 TGSQGEPMAALSRMAGGDHV-IRVREGDTVLLASSLIPGNENAVYRVINGLTSLGANVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +L Y ++P ++ +HGE HL A+ +LA++ G+ V Sbjct: 367 KG-NAKVHVSGHASAGELVYCYNIVKPSNVMPVHGESRHLRANADLAVKTGVDPRNVVVA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L ++ +V D ++G + + RR L+ G L+V ++D Sbjct: 426 ENGHVVDLVDGRASVVGKVPVHNVYVDASVVGGATEASLQDRRTLAEEGVLAVVAIIDAD 485 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+ + G G ++ + + D + L + I+ + Sbjct: 486 TGQLADPPDFLARGFV----HAGDSFDPVVPLIEKALARAATDGHPDSRQLEDVIARTVA 541 Query: 536 SLLKKVWGKKPLVTVFIN 553 S ++ + + PL+ + Sbjct: 542 SWARRTYRRAPLIIPVVI 559 >gi|325956523|ref|YP_004291935.1| metallo-b-lactamase superfamily protein [Lactobacillus acidophilus 30SC] gi|325333088|gb|ADZ06996.1| metallo-b-lactamase superfamily protein [Lactobacillus acidophilus 30SC] Length = 559 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + K Sbjct: 59 LVKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIKGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAKLGNEGVLALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + L + + P ++++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGIDLGYLHVPKDLIVDADEINKLPPDKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA + G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLTKPKYMIPVHGEYRMQVIHTQLAQEAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPNGARIAGRIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSDKPKESEIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|50955219|ref|YP_062507.1| hypothetical protein Lxx16090 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951701|gb|AAT89402.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 558 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 159/559 (28%), Positives = 286/559 (51%), Gaps = 17/559 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L +P GG+GEIG NM ++ Y K +++DCGV FP+ D PGVDL+ PD Sbjct: 11 LEPGTLRIVPTGGLGEIGRNMTVFEY----EGKLLIVDCGVLFPEPDQPGVDLILPDFAP 66 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +++ I +TH HEDH GA+ L +P+ S + L+EAK R+ Sbjct: 67 VRDRLDDVLGIVLTHGHEDHIGAVPYLLKLRADIPLIGSGLTLALVEAKLKEHRIKPYTL 126 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G +G F +E V VNHSIP+ +A+ I +P G ++HTGD+K+D + +TD Sbjct: 127 TV--AEGQHEQLGPFDLEFVAVNHSIPDALAVAITTPAGTVLHTGDFKMDQLPLDDRITD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G G+ + DSTNA G E+ I + ++ A V+V +FSS V R Sbjct: 185 LRAFARLGERGVDLFLVDSTNADVPGFTPLERSIGPVLDAVIVRAPRRVIVASFSSHVHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +++ A GR++ LLG S+ R +++A ++G ++ + + + + P ++++ ++ Sbjct: 245 VQQVLNAAAANGRRVALLGRSMVRNMTIAAELGYLQVPEGVLIDYKKAADLPDDKIVYMS 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP + LA+++ E +++ DTV+ +S IPGNE A+ + + L + G V+ Sbjct: 305 TGSQGEPMAVLARMANLEH-QIEVGRGDTVVLASSLIPGNENAVYRVIDGLTKLGANVVH 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ +HGE HLVA+ LA+ G+ Sbjct: 364 KG-NAKVHVSGHAAAGELLYCYNILKPKNVMPVHGEYRHLVANARLAMDTGVPEERTILA 422 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G ++ L ++ ++ G DG +G+ D + RR L G +S+ V+++ Sbjct: 423 EDGSVVDLRDGVARVVGQLDLGFVYVDGSSVGEITDADLKDRRILGEEGFISIIVVVEAG 482 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PEI G + + + V + + +D L + + + Sbjct: 483 SGRIVTGPEIHARGFA----EDDTVFDSVKPKVAAALAEAAHNGVRDSHALSQIVRRTVG 538 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 539 RWVNTSYRRRPMIVPLVIE 557 >gi|256842906|ref|ZP_05548394.1| beta-lactamase [Lactobacillus crispatus 125-2-CHN] gi|256614326|gb|EEU19527.1| beta-lactamase [Lactobacillus crispatus 125-2-CHN] Length = 559 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+D+L G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDNLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + K++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGNEGVLALLSDSTNAEVTQFTKSERFVAKSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V +D+G + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGVDLGYLNLPKDLIVDADEINKLPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQISLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGADVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + ++P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLVKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ PD I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPDGARITGHIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + R ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSNRPKASDIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|227877345|ref|ZP_03995417.1| metallo-beta-lactamase [Lactobacillus crispatus JV-V01] gi|256848720|ref|ZP_05554154.1| metallo-b-lactamase superfamily protein [Lactobacillus crispatus MV-1A-US] gi|262045872|ref|ZP_06018836.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|227863063|gb|EEJ70510.1| metallo-beta-lactamase [Lactobacillus crispatus JV-V01] gi|256714259|gb|EEU29246.1| metallo-b-lactamase superfamily protein [Lactobacillus crispatus MV-1A-US] gi|260573831|gb|EEX30387.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] Length = 559 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+D+L G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDNLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + K++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGNEGVLALLSDSTNAEVTQFTKSERFVAKSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V +D+G + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGVDLGYLNLPKDLIVDVDEINKLPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQISLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGADVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + ++P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLVKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ PD I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPDGARITGHIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + R ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSNRPKESDIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|58337136|ref|YP_193721.1| metallo-b-lactamase superfamily protein [Lactobacillus acidophilus NCFM] gi|227903712|ref|ZP_04021517.1| metallo-beta-lactamase [Lactobacillus acidophilus ATCC 4796] gi|58254453|gb|AAV42690.1| metallo-b-lactamase superfamily protein [Lactobacillus acidophilus NCFM] gi|227868599|gb|EEJ76020.1| metallo-beta-lactamase [Lactobacillus acidophilus ATCC 4796] Length = 559 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 164/561 (29%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAKLGNEGVLALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + L + E P ++++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGIDLGYLDIPKDLIVDAEEINKLPPDKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLTKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ + + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPNGARLAGRIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMSKSDKPKESEIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|295692710|ref|YP_003601320.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus ST1] gi|295030816|emb|CBL50295.1| Metallo-beta-lactamase superfamily protein [Lactobacillus crispatus ST1] Length = 559 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+D+L G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDNLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + K++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGNEGVLALLSDSTNAEVTQFTKSERFVAKSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V +D+G + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGVDLGYLNLPRDLIVDADEINKLPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQISLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGADVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + ++P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLVKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ PD I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPDGARIAGHIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + R ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSNRPKESDIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|289426364|ref|ZP_06428107.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289428694|ref|ZP_06430377.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|289153092|gb|EFD01810.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289158092|gb|EFD06312.1| conserved hypothetical protein [Propionibacterium acnes J165] Length = 563 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 298/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 12 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 67 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 68 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 127 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 128 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 187 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 188 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 247 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 248 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 307 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 308 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 367 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 368 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 426 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 427 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 486 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 487 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 542 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 543 GRWVSRSLRRRPMIVPVVVKI 563 >gi|315282324|ref|ZP_07870757.1| ribonuclease J 2 [Listeria marthii FSL S4-120] gi|313614029|gb|EFR87740.1| ribonuclease J 2 [Listeria marthii FSL S4-120] Length = 555 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 148/550 (26%), Positives = 264/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AI +TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AILLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G Sbjct: 129 SFAKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGER 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYNDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G + V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIIVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|227893359|ref|ZP_04011164.1| metallo-beta-lactamase [Lactobacillus ultunensis DSM 16047] gi|227864774|gb|EEJ72195.1| metallo-beta-lactamase [Lactobacillus ultunensis DSM 16047] Length = 559 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIKGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +GNEG+LAL+ DSTNA SE+ + K++++I+ G ++ TF+S++ Sbjct: 179 DFQRMAKLGNEGVLALLSDSTNAEVTQFTKSERFVAKSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVDNGIDLGYLNVPKDLIVDADEINKLPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLTKPKYMIPVHGEYRMQVIHTQLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPKGARIAGHIPAGDVYVDTSGTADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++I+ Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKSDKPKENDIKKAITEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|319408594|emb|CBI82249.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 558 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 261/553 (47%), Positives = 391/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ELVFLPLGGVGEIGMN+A YG+G R+W+++D GVSF +LPG +L+ PDI F+ Sbjct: 5 NENELVFLPLGGVGEIGMNLAAYGFGPKDCREWLLVDMGVSFAGPELPGANLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L VP+Y SPF GLLE+K+ KIP Sbjct: 65 ENEKHNVRGLVLTHAHEDHYGAVLDLWPKLQVPLYCSPFTAGLLESKKRSNFKFHKIPLN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQAGD +G F+IE++ VNHSIPE ++L I + +GN++HTGDWK+D LG VTD+ Sbjct: 125 IFQAGDCFQIGPFTIEAIAVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPVTDEK 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +GN+GILAL+CDSTNA+++G SE+ ++ ++ +I+ A+G V++ TFSS++ RIR Sbjct: 185 RLRILGNKGILALVCDSTNALQDGISPSEQQVRDSLSEIILKAEGRVVIATFSSNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE GR+++L+G S+KR VSVA ++G + F++++ + PR+ ++++ TGS Sbjct: 245 SIALAAESAGRQVLLVGRSIKRSVSVAQELGYLNNLAPFITEDDYSHTPRKNMVLVVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SALA+LSR EMRN+ L+ DT+I+SSR+IPGNE AI I+NR ++QG++VI + Sbjct: 305 QGEPCSALAKLSRNEMRNIALSPGDTIIYSSRSIPGNEKAIFEIQNRFIDQGIKVITNN- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +L +MY W++PQ+LV +HGE HLVA LA + I + +RNG M Sbjct: 364 DALVHVSGHPRRLELLQMYDWVKPQILVPVHGEAAHLVAQAALAREANIKTIAEIRNGDM 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P PIEI+++V G KDG+LIG ++GI +RR+LS+VG++++++ +++ +++ Sbjct: 424 LRLAPKPIEIVEKVPVGQIYKDGYLIGSEDEVGINERRKLSYVGYVAISLHMNSKHDLLD 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 G+P DG G + +LL V T+ ++PQ +RKD +L++E+ A+R+ + ++ Sbjct: 484 DIGFTAFGLPKNDGKGKSLKDILLTVVENTINNIPQIKRKDNELIQEATRRAVRATVNEI 543 Query: 542 WGKKPLVTVFINK 554 WGKKP+ T+F+++ Sbjct: 544 WGKKPVCTIFLHR 556 >gi|126652546|ref|ZP_01724711.1| hypothetical protein BB14905_03140 [Bacillus sp. B14905] gi|126590674|gb|EAZ84790.1| hypothetical protein BB14905_03140 [Bacillus sp. B14905] Length = 570 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 270/557 (48%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + +PLGGVGEIG M + + ++D G+ FP+D++ G+D+V PDIT++ Sbjct: 20 KNELIRIIPLGGVGEIGKAMYVVEI----DEELFVVDSGLMFPEDEMLGIDIVIPDITYL 75 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + IF+TH HED G++ + + PVY S I L + ++ Sbjct: 76 EENKERVKGIFLTHGHEDAIGSIAYVLQKIKAPVYGSKLTIALAKEHLKELPAPHQVKFF 135 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +++ + + HSIP+++ +V + G IVHTG++K D A D Sbjct: 136 EVTNRSRMNFNSTYVTFFHTTHSIPDSLGVVFHTSEGAIVHTGEFKFDQSATGKFKPDLA 195 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+ L+ +S A R G SE I++ + +A G +LV ++S+ RI+ Sbjct: 196 KMAQLGEDGVFILLSESCEAERPGYTTSEIVIEEQLSKTFHSAPGRILVAVYASNFIRIQ 255 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + A++ RK+V++G L++ V + + +G + ++ + Y +++I+I TG Sbjct: 256 QVFAQAQKSFRKVVIVGKPLEKAVDLGVQLGYLTVEEDTIIPISEMQKYQDDEIIIITTG 315 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++GEP AL ++ R R++K+ + DTV+ + PG EV + + N + + G ++ Sbjct: 316 NKGEPLDALEKIVRKHHRDIKIKQGDTVLITFTPSPGMEVQMANTMNSISKAGAEILTSS 375 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH DLK M ++P+ + + GE L+AH +LA Q + + Sbjct: 376 KN--VHVSGHGSQEDLKLMLNLMQPKYFIPVQGEYRMLIAHSKLAQQLGMQKSQIFIADK 433 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 434 GDIVEYKNNKMRMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRAQK 493 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + ++ T + + +++ I L + Sbjct: 494 KIASGPEILSRGF-VYVRESEELMVEASDIARTVIEKYVGKDTFEWTNIKQEIRDTLNTY 552 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 553 LFQKTKRRPMIIPIIME 569 >gi|77406197|ref|ZP_00783267.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77412348|ref|ZP_00788660.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77161604|gb|EAO72603.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77175191|gb|EAO77990.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 559 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKHLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|255325188|ref|ZP_05366294.1| ribonuclease J [Corynebacterium tuberculostearicum SK141] gi|255297753|gb|EET77064.1| ribonuclease J [Corynebacterium tuberculostearicum SK141] Length = 713 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 181/556 (32%), Positives = 282/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L LGG+ EIG NM ++ YG I+IDCGV FP PGVDL+ PD I Sbjct: 147 KDALRIYALGGISEIGRNMTVFEYG----DDLIIIDCGVLFPSSGEPGVDLILPDFGPIE 202 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K + Sbjct: 203 KKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--FV 260 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V G F + VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 261 EVNEKSDVTYGPFRVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLP 320 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I N ++ AK V++ +F+S+V R++ Sbjct: 321 ALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFKRLVAGAKQRVILASFASNVYRVQ 380 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A GRK+ G S+ R + +A +G +K + + + ++I TG Sbjct: 381 AAIDAAVANGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKTMLITTG 440 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + DT+IFSS IPGNE A+ + N L + G VI Sbjct: 441 TQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPGNEEAVYGVINMLSQIGANVITNQ 500 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +N Sbjct: 501 -DVKVHASGHGYAGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVDRDRTVLAQN 559 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 560 GVVVDLRKGRAEVVGQMQVGNLYVDGVSMGDVDADTLADRTNLGTGGVVSITCVIDNRTS 619 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D I + + V T+ DL D + + + + L Sbjct: 620 RLLEHPTVSTTGFSDDDR---GIVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKL 676 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 677 MDSKYKREPVILPTIV 692 >gi|104773844|ref|YP_618824.1| metallo-beta-lactamase family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513851|ref|YP_812757.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422925|emb|CAI97587.1| Putative hydrolase (metallo-beta-lactamase superfamily) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093166|gb|ABJ58319.1| RNase J1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 559 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+ EIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKQNEVAVFAIGGLHEIGRNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ ++H HEDH G + L + +PVYA+PFA+ L+++K + + Sbjct: 59 LVKNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + + R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+LAL+ DSTNA SE+ + ++++I+ +G ++ TF+S++ Sbjct: 179 NFQRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVAGSLHNIITGIEGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + L + E+ P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLDVPEGLIVDAETINSLPPEKVMLL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R +KL DTVIFSS IPGN +++ + N+L+E G V+ Sbjct: 299 CTGSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTLSVNQLINKLMEGGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKLMVELAKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG+++ P+ I ++ D ++ + R+ LS G + +D Sbjct: 418 LKNGEVVCFSPEGARIAGDIHVKDVFVDTSGADDVGNIVVRDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K V + ++ + + +R++I Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESQDLINAAQKHVYHVLKTEMAKSDKPKDSEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSRTERRPMILPMLVE 557 >gi|315081288|gb|EFT53264.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] Length = 557 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 300/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 6 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 61 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 62 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++ F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 122 LNVVHESDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 182 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + + Y ++++I Sbjct: 242 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENIVIELRDLDHYRDNEVVII 301 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 302 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 362 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 420 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 421 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 480 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 481 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 536 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 537 GRWVSQSLRRRPMIVPVVVKI 557 >gi|209885067|ref|YP_002288924.1| beta-lactamase domain protein [Oligotropha carboxidovorans OM5] gi|209873263|gb|ACI93059.1| beta-lactamase domain protein [Oligotropha carboxidovorans OM5] Length = 556 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 234/543 (43%), Positives = 353/543 (65%), Gaps = 2/543 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIM 62 +EL F+PLGG+GEIGMN++LYG G R W+ +D GVSF ++ LPG+++V PDI F+ Sbjct: 5 DELSFVPLGGIGEIGMNLSLYGLGKGRQRSWLAVDLGVSFGNEEHLPGIEIVMPDIRFLE 64 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ERKNL+ + +THAHEDH+GA+ DLW L P+YA+ F+ L EAK ER IP Sbjct: 65 SERKNLVGLVLTHAHEDHFGAIIDLWPRLQCPIYATKFSASLFEAKCAAERTPTNIPVTV 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++G ++DVG F++E + V HSIPE+ AL IR+ G ++HTGDWKLD ++G+ T++ Sbjct: 125 VESGARIDVGPFNVEFIAVQHSIPESHALAIRTSEGVVLHTGDWKLDPTPLIGEPTNEKR 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG+EG+LAL+ DSTNA+REG SE+ + +++ +I+K AKG V VTTF+S+VSR+R+ Sbjct: 185 LREIGDEGVLALVGDSTNAVREGRSPSEREVARSLTEIIKAAKGRVAVTTFASNVSRLRA 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + + A + R++VL+G +++RV VA + G + F + +G +P ++++ + TGSQ Sbjct: 245 VAEAAREAEREVVLIGRAMERVAQVARETGYLDGVAPFRGADYYGHFPPDKVLALCTGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+ALA+++ + +V L + DTVIFSSR IPGNE A+G I N LV +G++VI + Sbjct: 305 GEPRAALARIANDDHPDVTLNKGDTVIFSSRTIPGNERAVGGIINNLVTRGIKVITDRTH 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP +L+ + W+RPQ+L+ HGE LHL H +LA G+ V +NG ++ Sbjct: 365 -LVHVSGHPRREELRELISWVRPQLLIPAHGEALHLSEHADLARACGVPKVMICKNGDLV 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P I++EV G KDG ++ + RR+L+F G V + L + Sbjct: 424 RLGPGEPAIVEEVPAGRLYKDGKILEDQNSRAVVARRRLAFAGSAFVALALTEKGELADD 483 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P++ IGIP + G I +L+ ++T +LP+ +R D + E++ A+RS + + W Sbjct: 484 PQVDLIGIPERNTAGELIDELVYDVAVSTFENLPRAKRGDPDAVGEAVRRAVRSAIAEQW 543 Query: 543 GKK 545 GKK Sbjct: 544 GKK 546 >gi|50842946|ref|YP_056173.1| metal dependent hydrolase [Propionibacterium acnes KPA171202] gi|50840548|gb|AAT83215.1| metal dependent hydrolase [Propionibacterium acnes KPA171202] gi|313763620|gb|EFS34984.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313794015|gb|EFS42039.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313801401|gb|EFS42652.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313807919|gb|EFS46400.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313813578|gb|EFS51292.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313816800|gb|EFS54514.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313819704|gb|EFS57418.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313822189|gb|EFS59903.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823576|gb|EFS61290.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825901|gb|EFS63615.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313839877|gb|EFS77591.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914624|gb|EFS78455.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314919263|gb|EFS83094.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920826|gb|EFS84657.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314924583|gb|EFS88414.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314930505|gb|EFS94336.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954337|gb|EFS98743.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314957385|gb|EFT01488.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314962052|gb|EFT06153.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963631|gb|EFT07731.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314968537|gb|EFT12635.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] gi|314978853|gb|EFT22947.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314986488|gb|EFT30580.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990847|gb|EFT34938.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315079485|gb|EFT51478.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315083486|gb|EFT55462.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315087172|gb|EFT59148.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089342|gb|EFT61318.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315099248|gb|EFT71224.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100518|gb|EFT72494.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315106711|gb|EFT78687.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|327329762|gb|EGE71518.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA3] gi|327334280|gb|EGE75994.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL097PA1] gi|327446448|gb|EGE93102.1| hypothetical protein HMPREF9568_01030 [Propionibacterium acnes HL013PA2] gi|327451964|gb|EGE98618.1| hypothetical protein HMPREF9584_02170 [Propionibacterium acnes HL092PA1] gi|327454999|gb|EGF01654.1| hypothetical protein HMPREF9581_01187 [Propionibacterium acnes HL087PA3] gi|327457712|gb|EGF04367.1| hypothetical protein HMPREF9586_00288 [Propionibacterium acnes HL083PA2] gi|328752203|gb|EGF65819.1| hypothetical protein HMPREF9563_02472 [Propionibacterium acnes HL020PA1] gi|328755167|gb|EGF68783.1| hypothetical protein HMPREF9579_01194 [Propionibacterium acnes HL087PA1] gi|328758054|gb|EGF71670.1| hypothetical protein HMPREF9588_00993 [Propionibacterium acnes HL025PA2] gi|332675896|gb|AEE72712.1| ribonuclease J [Propionibacterium acnes 266] Length = 557 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 298/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 6 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 61 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 62 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 122 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 182 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 242 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 301 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 302 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 362 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 420 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 421 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 480 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 481 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTI 536 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 537 GRWVSRSLRRRPMIVPVVVKI 557 >gi|313633250|gb|EFS00117.1| ribonuclease J 2 [Listeria seeligeri FSL N1-067] gi|313637845|gb|EFS03179.1| ribonuclease J 2 [Listeria seeligeri FSL S4-171] Length = 555 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 151/550 (27%), Positives = 267/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRIK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + A + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKVKAPVYGTELTIALAKSALKEHRKLRFKNFHIVDAETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFAKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A +GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHQGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVG-IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A + II + L + + Y E++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLDKIIINEDLIIPLKDVKKYNDEEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNSLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+ + V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSNVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKTKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|313608791|gb|EFR84598.1| ribonuclease J 2 [Listeria monocytogenes FSL F2-208] Length = 555 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 150/550 (27%), Positives = 264/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 GILAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GILALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSXXVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|313829581|gb|EFS67295.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|315109047|gb|EFT81023.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] Length = 557 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 171/561 (30%), Positives = 298/561 (53%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 6 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 61 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 62 LDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 122 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 182 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 242 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVII 301 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 302 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAVV 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 362 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL 420 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 421 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 480 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P I G +G + + ++T + D L++ + + Sbjct: 481 RSASVVSRPAIQARGFA----EGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQGVRRTI 536 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 537 GRWVSRSLRRRPMIVPVVVKI 557 >gi|268319685|ref|YP_003293341.1| metallo-beta-lactamase superfamily protein [Lactobacillus johnsonii FI9785] gi|262398060|emb|CAX67074.1| metallo-beta-lactamase superfamily protein [Lactobacillus johnsonii FI9785] Length = 559 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 161/561 (28%), Positives = 278/561 (49%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+GEIG NM Y + I++DCG+ FP+DD+ G++ V D ++ Sbjct: 3 LKNNEVGVYAIGGLGEIGRNMYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + Sbjct: 59 LVKNRKKIKALVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G ++ TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVLFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ Sbjct: 179 DFQEMAKLGKEGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVDTGRKVAIFGRSMENGVQNGIDLGYLDIPEGTLVDANEINHTPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGTHRQISLQPGDTVIFSSNPIPGNTISVNHLINKLTEAGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 VH SGH + K M + +P+ + +HGE V H E A Sbjct: 359 HGKIH-NVHTSGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMPKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG +L L D I + D ++ + R+ L+ G + V +D Sbjct: 418 LKNGDVLALTRDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + ++ + + +R++I Sbjct: 478 KHQRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLKTEMAKDPQPKENEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSKTERRPMILPMLIE 557 >gi|49474192|ref|YP_032234.1| hypothetical protein BQ05790 [Bartonella quintana str. Toulouse] gi|49239696|emb|CAF26071.1| hypothetical protein BQ05790 [Bartonella quintana str. Toulouse] Length = 558 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 258/552 (46%), Positives = 387/552 (70%), Gaps = 1/552 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E VFLPLGGVGEIGMN+A YG+G + R+W+++D GVSF +LPG DL+ PDI F+ Sbjct: 6 KNEFVFLPLGGVGEIGMNLAAYGFGPQNLREWLLVDMGVSFAGPELPGADLILPDIRFLE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 E+ N+ + +THAHEDHYGA+ DLW L VP+Y +PF GLLE+KR + S KI Sbjct: 66 SEKHNVRGLILTHAHEDHYGAVLDLWPKLKVPLYCTPFTAGLLESKRQSDFGSHKISLNI 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 FQAGD VG+F++E++ VNHSIPE+++L I + +G ++HTGDWK+D LG VTD+ Sbjct: 126 FQAGDCFQVGSFAVEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGTVTDEKR 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A+G +G+LAL+CDSTNA +G SE+ ++ ++++I+ A+G V + TF+S+V RIRS Sbjct: 186 FRALGKKGVLALLCDSTNACWDGITPSEQQVQTSLFEILSKAEGRVAIATFASNVGRIRS 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I AE GR+++++G SLKR + VA + G + F+S++ +G PR+++++I TGSQ Sbjct: 246 IALAAESAGRQVLVVGHSLKRSIMVAQEFGYMNGLAPFVSEDDYGYIPRKEIVLIVTGSQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+ALA+LSR EMRN+ L+ DTVI+ SR IPGNE +I I+NR ++ G++ I + + Sbjct: 306 GEPRAALAKLSRNEMRNIALSAGDTVIYCSRNIPGNEKSIIEIQNRFIDLGIKTITNE-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L +MY W++PQ+LV +HGE +HL A LA Q GI + +RNG ML Sbjct: 365 ALVHVSGHPRRSELLQMYDWVKPQILVPVHGEAMHLTAQAALARQAGIKIIADIRNGNML 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P+P+E+ID+V G KDG LIG LGI +RR+LS+ GH++V++ +++ +++ G Sbjct: 425 RLAPEPVEVIDQVAVGRIYKDGCLIGDEDTLGIRERRKLSYAGHVAVSLQMNSKHDLQGD 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 + G+P +G + +LL V T+ ++P+ +RK+ +L+RE+ A+R+ + +VW Sbjct: 485 IGLTTSGLPESNGKEESLKDILLDVVKNTLYNIPRVKRKNNELIREATRRAVRAAVNEVW 544 Query: 543 GKKPLVTVFINK 554 KKP+ TVF+++ Sbjct: 545 QKKPICTVFLHR 556 >gi|298346542|ref|YP_003719229.1| putative metal-dependent hydrolase [Mobiluncus curtisii ATCC 43063] gi|304389740|ref|ZP_07371699.1| metallo-beta-lactamase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236603|gb|ADI67735.1| possible metal-dependent hydrolase [Mobiluncus curtisii ATCC 43063] gi|304326916|gb|EFL94155.1| metallo-beta-lactamase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 564 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 160/558 (28%), Positives = 297/558 (53%), Gaps = 15/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L +PLGG+GE+G NM + + K +++DCGV FP++ PGVDL+ PD T+I Sbjct: 15 KPDVLRVVPLGGLGEVGRNMTVLE----TEGKILIVDCGVLFPEEIQPGVDLILPDFTYI 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + +TH HEDH GA+ L +PVY S + +E K + R+ Sbjct: 71 QDRMADVVGVVLTHGHEDHIGAVPYLLKLREDIPVYGSHLTLAFVEPKLLEHRL-PTTNL 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G+++D+G F +E VNHSIP+ +A+++R+ G+ + TGD+K+D + G +TD Sbjct: 130 RVKAEGERLDLGPFHLEFCAVNHSIPDALAVMVRTKAGSALITGDFKMDQLPLDGRITDL 189 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G G+ DSTNA G SE+ I + D+ +A G ++V +F+S V R+ Sbjct: 190 RAFARWGEAGVDLFCVDSTNAEVPGFITSEREIGPVLEDVFLHATGQIVVASFASHVHRV 249 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ L+G S++R +++A + G + D + + + P E+ + +AT Sbjct: 250 QQVLNAAAKSNRKVALVGRSMERNMTIAAEAGYMTVPDGVLIDLKDVNSLPPERRVYMAT 309 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R + + + DTV+ +S IPGNE ++G + N+L+ G +V+ + Sbjct: 310 GSQGEPMAALSRIANRSHRTISIGQGDTVVLASSLIPGNENSVGRVINQLIRLGAQVVHK 369 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 VHVSGH +L Y ++P+ ++ IHGE HLVA+ + A++ G+ V Sbjct: 370 G-NSRVHVSGHAATGELLYAYNIVKPKNVMPIHGEIRHLVANGKHAVKTGVDPRRVMLAE 428 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G + + +I+ +V DG IG+ + + RR L+ G ++V V+++ + Sbjct: 429 DGVCVEVKNGEAQIVGQVPCDFIYVDGTSIGEIGESELYDRRVLAQEGFVAVYVVMEMST 488 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P ++ G+ + + + + + + + +++ + L Sbjct: 489 GTILAGPTVIARGVA----ENDDVFRDIEPAIADALSAAAADGQANVRDMERVARRTLGR 544 Query: 537 LLKKVWGKKPLVTVFINK 554 + K + P++ + + Sbjct: 545 WVSKRLKRAPMIVPLVLE 562 >gi|325125508|gb|ADY84838.1| Metallo-b-lactamase superfamily protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 559 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+ EIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKQNEVAVFAIGGLHEIGRNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ ++H HEDH G + L + +PVYA+PFA+ L+++K + + Sbjct: 59 LVKNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + + R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + +G EG+LAL+ DSTNA SE+ + ++++I+ +G ++ TF+S++ Sbjct: 179 NFQRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVAGSLHNIITGIEGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + L + E+ P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLDVPEGLIVDAETINSLPPEKVMLL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R +KL DTVIFSS IPGN +++ + N+L+E G V+ Sbjct: 299 CTGSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTLSVNQLINKLMEGGANVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA Q G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKLMVELAKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 ++NG+++ P+ I ++ D ++ + R+ LS G + +D Sbjct: 418 LKNGEVVCFSPEGARIAGDLHVKDVFVDTSGADDVGNIVVRDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K V + ++ + + +R++I Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESQDLINAAQKHVYHVLKTEMAKSDKPKDSEIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ + + Sbjct: 537 LQDFLYSRTERRPMILPMLVE 557 >gi|257784590|ref|YP_003179807.1| beta-lactamase domain-containing protein [Atopobium parvulum DSM 20469] gi|257473097|gb|ACV51216.1| beta-lactamase domain protein [Atopobium parvulum DSM 20469] Length = 554 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 176/559 (31%), Positives = 292/559 (52%), Gaps = 13/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +P+GG+ IG NM ++ YG +++D G+ FP D+ PG+DLV PD T++ Sbjct: 4 KDPALKVIPMGGLDGIGKNMTVFEYG----NDMVLVDAGLMFPDDEQPGIDLVLPDYTYV 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L I ITH HEDH GAL L L VP+Y+S ++G +E K ++ Sbjct: 60 LENEDKLRGILITHGHEDHIGALPYLLMDLTRKVPIYSSKLSLGFIEGKLAEHKIVG-TK 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G KV +GAF I + HSIP + +++P G ++H+GD+KLD I G + Sbjct: 119 LREVTDGSKVQLGAFDITFFSMTHSIPAAFGIHMKTPAGTLIHSGDFKLDQTPIDGVRPN 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++ +EG+ L+ DSTNA R G SE + + I+KNA G V V +FSS + R Sbjct: 179 YAAITKFASEGLDLLLSDSTNANRPGMTPSEASVGAALRHIIKNATGRVFVASFSSHIHR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ + D + + RK+V+ G S+ +A ++G + D+ + ++++V+ Sbjct: 239 LQQVCDASVAVKRKVVVTGRSMITNTKIARELGYLNIADKDIIDAYDVDKLADDRIVVLC 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ GE +++ + +DTVI S+ +PGNE ++ I N L + G + Sbjct: 299 TGSQGEPLSALARMANGEHKSLSIRPQDTVIISATPVPGNEKSVQSIINALSKIGCEI-Y 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + ++ VHVSGH +LK M RP+ + +HGE +HL AH ELA Q G+ + + Sbjct: 358 DKSKALVHVSGHGSQEELKLMLGMARPKNFMPVHGEAVHLRAHAELAQQMGVPANRIFIL 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L + + V G+ DG + + + R++LS G ++ V L Sbjct: 418 DNGDTLEMRNGKVTRGKTVESGVVYVDGLSVTDANPVVLRDRQRLSQDGIVTAVVTLVGR 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 GV EI G+ D ++ V ++ + +++ +R+S+ +AL + Sbjct: 478 NLKPGVVEISGRGVSF--ADDDELMNDAQNLVRNSIEKASKSEGANIEAMRKSVRNALSN 535 Query: 537 LLKKVWGKKPLVTVFINKI 555 L +P+V I ++ Sbjct: 536 FLWSKTRTRPMVIPVIMEV 554 >gi|206901025|ref|YP_002250872.1| metallo-beta-lactamase family protein [Dictyoglomus thermophilum H-6-12] gi|206740128|gb|ACI19186.1| metallo-beta-lactamase family protein [Dictyoglomus thermophilum H-6-12] Length = 548 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 184/555 (33%), Positives = 293/555 (52%), Gaps = 14/555 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +P+GG GEIG NM L YG I+ID G+ FP D+ G+D V PDI++++ Sbjct: 4 RLKIIPIGGFGEIGKNMLLLQYG----DTIIVIDAGLMFPDGDMLGIDFVIPDISYLISN 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + A+ +TH HEDH GAL L L +P+Y +P +GL+E K R+ + I + Sbjct: 60 KDKVKALILTHGHEDHIGALQYLLKDLDIPIYGTPLTLGLVEKKLEEFRLKANLNKI--K 117 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D + +G F+IE+ R HSIP+T+ L I +PVG IV +GD+KLD I G+ D + L Sbjct: 118 PNDTITIGPFTIETFRQTHSIPDTIGLAITTPVGLIVISGDFKLDQTPIDGNPPDFNKLV 177 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G G+LAL CDSTN + G SE +K + +I + K + + TF+S+ RI+ + Sbjct: 178 EFGKRGVLALFCDSTNVEQPGITPSESLVKSSFENIFNSTKSRIFLVTFASNFHRIQQAV 237 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+ + G SL + VA +G I D + ++ + P E+++V+ TGSQG Sbjct: 238 DMALKFGRKVAIAGKSLITNIEVAKRLGYINIPDDIMINIKDVNNLPDEKVLVLTTGSQG 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+ L+ + + L DTVI S++ IPGNEV + + ++L +GV VI + Sbjct: 298 EPYSALSLLTNHSYKQLSLRPGDTVILSTKPIPGNEVMVYRMVDQLFRKGVEVIYGK-DA 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH ++K ++P+ L+ HGE HL K++ L+ GI + + NG + Sbjct: 357 GVHVSGHAAQEEVKMFINLLKPKYLIPYHGEYRHLALLKKIGLELGIPKDHIIIIENGTI 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 L ++ DG IG ++ + +R++L+ G L V VL+D+ I Sbjct: 417 LEFEDGRAITDGKISLNNIYVDGLSIGDVGNIILMERKRLAEDGVLIVGVLIDSETGLIL 476 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PEI+ G + D ++ ++ + V K + L + + Sbjct: 477 DGPEIISKGF-IFVKDSEELIEIARERVREVFRKKAGKNGNINK--EALVKETLENFFNE 533 Query: 541 VWGKKPLVTVFINKI 555 +KP++ + +I Sbjct: 534 ELKRKPVIIPLVWEI 548 >gi|289434718|ref|YP_003464590.1| metallo-beta-lactamase superfamily protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170962|emb|CBH27504.1| metallo-beta-lactamase superfamily protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 555 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 152/550 (27%), Positives = 268/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRIK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + A + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKVKAPVYGTELTIALAKSALKEHRKLRFKNFHIVDAETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFAKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A +GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHQGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVG-IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A + II K+ L + + Y E++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLDKIIIKEDLIIPLKDVKKYNDEEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNSLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+ + V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSNVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKTKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|25028419|ref|NP_738473.1| putative metallo-beta-lactamase superfamily protein [Corynebacterium efficiens YS-314] gi|23493704|dbj|BAC18673.1| putative metallo-beta-lactamase superfamily protein [Corynebacterium efficiens YS-314] Length = 700 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 281/555 (50%), Gaps = 15/555 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 135 NGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEN 190 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + A+ +TH HEDH GA+ L +P+ S F + L+ AK R+ K+ I Sbjct: 191 HLNRVEALVVTHGHEDHIGAIPWLLKLRHDIPIIGSRFTLALIAAKCKEHRLRPKL--IE 248 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G F+I VNHSIP+ + L I++P G ++HTGD KLD G TD + Sbjct: 249 VNEQSNENRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPTDGRPTDLPA 308 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+ ++CDSTNA G SE I + ++ AK V++ +F+S+V R+++ Sbjct: 309 LSRFGDEGVDLMLCDSTNATTPGVSGSEAEIAPTLKRLVSEAKQRVILASFASNVYRVQA 368 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 +D A RK+ G S+ R + +A +G +K +S + ++++I TG+ Sbjct: 369 AVDAAVAANRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIISMDDASRMAPHKVMLITTGT 428 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G VI Sbjct: 429 QGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVITGR- 487 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +NG Sbjct: 488 DAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVQRENVVLAQNG 547 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L ++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 548 VVVDLVNGQARVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITCVIDNRTGR 607 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G D + + + TT+ DL D + + + L + Sbjct: 608 LLERPKVETTGFS---EDSKAMMPEVAELAETTMNDLAAEGENDPYRMVQQMRRRLSRFV 664 Query: 539 KKVWGKKPLVTVFIN 553 ++ W ++P++ + Sbjct: 665 EQKWKRQPVIMPTVI 679 >gi|323466785|gb|ADX70472.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus H10] Length = 559 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 290/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGKEGVLALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V+ ID+G + L ++ + P ++++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVANGIDLGYLNVPKDLIVNAKEINKLPPDKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA + G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLSKPKYMIPVHGEYRMQVIHTQLAQEAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPNGARIAGRIPAGDVYVDTSGTADVDNVVVHDRQILSEEGLVVAVATIDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++IS Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELINQTQKHVYHVLRNEMAKSDKPKESDIKKAISEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|282858006|ref|ZP_06267207.1| ribonuclease J 1 (RNase J1) [Pyramidobacter piscolens W5455] gi|282584160|gb|EFB89527.1| ribonuclease J 1 (RNase J1) [Pyramidobacter piscolens W5455] Length = 604 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 181/556 (32%), Positives = 292/556 (52%), Gaps = 13/556 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E L F+PLGG+GEIG NM Y ++ID G+ FP +++ G+D V PDI+++ + Sbjct: 58 ETLKFIPLGGLGEIGKNMYAIEY----ENDIVVIDAGLMFPDEEMLGIDFVIPDISYLEE 113 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 RK + I ITH HEDH GAL + L VPVY++ +G++E K + K + Sbjct: 114 NRKKIRGILITHGHEDHIGALPFVLPKLDVPVYSAKLTLGMIEGKMLEAAPRYKPRLMEV 173 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +AG+ + +G F + + V HSIP+ + + + +P+G ++HTGD+K D + VTD + Sbjct: 174 KAGETISLGVFKVTFISVCHSIPDALGIAVETPLGIVLHTGDFKFDPTPVDEHVTDYAAF 233 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRS 242 +G +G+L + DSTNA REG SEK + I ++ + + V+++ F+S++ R++ Sbjct: 234 AELGRKGVLLMASDSTNAEREGFTKSEKSLSGAIDNLFRTYRNRRVIISAFASNLHRVQL 293 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++D A + RK+V G S+ V +AI +G IK + + Y L+V+ TGS Sbjct: 294 VLDAAARFNRKVVFAGRSMVNNVELAIRLGYIKAEPDTIVPLAEMDSYNDSHLVVMTTGS 353 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP S L +S+G VKL KD V + IPGNE + + NRL E G V+ Sbjct: 354 QGEPFSGLVLMSKGAHHRVKLDSKDVVALFANPIPGNEKLVSNTINRLFELGCEVLYGR- 412 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E +HVSGH +LK + ++P+ V +HGE + H +LA + GI + + NG Sbjct: 413 EAGLHVSGHASREELKMLLSMVKPKYFVPVHGEYRMQIRHSQLAEEVGIPGKNIFIMNNG 472 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L + + + +V G L DG +G+ + +R++LS G L V++ LD + Sbjct: 473 DILSIARNSAGVKSKVQAGAVLVDGMALGEKEGSILKERQELSENGVLVVSITLDKKGLL 532 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P G + D + + + V + P D +LL++ IS + LL+ Sbjct: 533 VGEPCFESYGQIHF-KDAEGMRQEFSEAVRRALKREPSE---DDELLKKQISLRCKELLR 588 Query: 540 KVWGKKPLVTVFINKI 555 K V I ++ Sbjct: 589 KYMRSASAVIPLIARL 604 >gi|315303165|ref|ZP_07873830.1| ribonuclease J 2 [Listeria ivanovii FSL F6-596] gi|313628464|gb|EFR96932.1| ribonuclease J 2 [Listeria ivanovii FSL F6-596] Length = 555 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 149/550 (27%), Positives = 267/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRIK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + A + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHIVDADTTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G I++TGD+K D A G +D + G + Sbjct: 129 SFAKIDVSFFRTTHTIPDSVGIVLETSEGAIIYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A +GT S+ I++ I + A G ++V +S++ R++ +++ + Sbjct: 189 GVLALLSDSSEAEHQGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLEASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVG-IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A + II ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLDKIIIEEDLIIPLKDVKKYNDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTIDMLYKAGAKVLT--MSNTLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+ A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKANVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKTKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K V V Q + L++ I L L + ++ Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 546 PMILPIIMEV 555 >gi|282854614|ref|ZP_06263949.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282582196|gb|EFB87578.1| conserved hypothetical protein [Propionibacterium acnes J139] Length = 563 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 169/561 (30%), Positives = 296/561 (52%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 12 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 67 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 68 LDEEKLARVKALVLTHGHEDHIGAVPYLLKRRSDIPIYGSKLTLALVEAKLREHRIKGYK 127 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 128 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 187 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 188 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 247 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + Y ++++I Sbjct: 248 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPGNTVIELRDLDHYRDNEVVII 307 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 308 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGATVV 367 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 368 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDEKNVVL 426 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 427 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 486 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P + G +G + + ++ + D L++ + + Sbjct: 487 RSASVVSRPAVQARGFA----EGDSVFAEITDQIVAELEKAMAGGMDDTHRLQQVVRRTI 542 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 543 GRWVSRSLRRRPMIVPVVVKI 563 >gi|212716222|ref|ZP_03324350.1| hypothetical protein BIFCAT_01138 [Bifidobacterium catenulatum DSM 16992] gi|212660734|gb|EEB21309.1| hypothetical protein BIFCAT_01138 [Bifidobacterium catenulatum DSM 16992] Length = 684 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 297/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 123 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFHYI 178 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R++ ++ Sbjct: 179 KDRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCKEHRINPRL-- 236 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 237 VEVKGRDKLKVGPFNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 296 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 297 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETTIGPALDQAFAQATRKIIVASFSSHVHRV 356 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 357 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKKAHDVQDDKLVYMCT 416 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + I N+LV+ G RV+ Sbjct: 417 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKIINKLVQLGARVV-N 475 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 476 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 535 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ + + KRR L G +S V++D Sbjct: 536 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTEEELEKRRILGTEGFVSSFVVVDTET 595 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D +D L++ + L S Sbjct: 596 ADVVAGPKIYLNAVAEDESE----FDKVRHQIVEQLQDAMMTGTRDTYKLQQIMRRTLGS 651 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 652 WVARQLHRKPMIVPVVADIAQD 673 >gi|116494789|ref|YP_806523.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus casei ATCC 334] gi|116104939|gb|ABJ70081.1| RNase J1 [Lactobacillus casei ATCC 334] Length = 560 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 273/560 (48%), Gaps = 13/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E +GG+GEIG NM YG + I+ID G+ FP+DDL G+D V D ++ Sbjct: 5 IKNNETAVFAVGGLGEIGKNM----YGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +++ + + A+ ITH HEDH G + + +VP+YA P A L+ K + + Sbjct: 61 LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVT 178 + S+E R HSIP+T+ + + +P G ++ TGD+K D + Sbjct: 121 LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C EG+L LM DSTNA SE+ + K+I I G ++ TF+S++S Sbjct: 181 NFQKMCRFAEEGVLVLMSDSTNAEVPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 RI D A GRKI + G S++ + ++G + D + + P ++++++ Sbjct: 241 RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLIDAHQLNSMPADKVMIL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN V++ H+ N+L E G VI Sbjct: 301 CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH D K M + I+P+ +A HGE H ELA Q G+ Sbjct: 361 HGKVN-NVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCYI 419 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG +L L D I G DG +G + I RR LS G + V ++ Sbjct: 420 MENGDVLALTQDSARIAGHFPAGDVYIDGNGVGDIGNAVICDRRMLSEEGLVVVVATINM 479 Query: 476 HYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + P+++ G Y + G++ + V T+ + L+++I+S Sbjct: 480 QKQAVLAGPDLLSRGF-IYMRESGELINQAQRRVYRTIKSTFSSSEKVTEASLKDAITSN 538 Query: 534 LRSLLKKVWGKKPLVTVFIN 553 L+ L + P++ + Sbjct: 539 LQEFLFDKTERHPVILPMLI 558 >gi|319745751|gb|EFV98048.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 559 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ ++ R HSIPE + +VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLNVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIEIGYIKVPKGTFIEPSELKNLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|311739660|ref|ZP_07713495.1| metallo-beta-lactamase superfamily protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311305476|gb|EFQ81544.1| metallo-beta-lactamase superfamily protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 716 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 181/556 (32%), Positives = 282/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L LGG+ EIG NM ++ YG I+IDCGV FP PGVDL+ PD I Sbjct: 150 KDALRIYALGGISEIGRNMTVFEYG----DDLIIIDCGVLFPSSGEPGVDLILPDFGPIE 205 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K + Sbjct: 206 KKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--FV 263 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V G F + VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 264 EVNEKSDVTYGPFRVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLP 323 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I N ++ AK V++ +F+S+V R++ Sbjct: 324 ALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFKRLVAGAKQRVILASFASNVYRVQ 383 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A GRK+ G S+ R + +A +G +K + + + ++I TG Sbjct: 384 AAIDAAVANGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKTMLITTG 443 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + DT+IFSS IPGNE A+ + N L + G VI Sbjct: 444 TQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPGNEEAVYGVINMLSQIGANVITNQ 503 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +N Sbjct: 504 -DVKVHASGHGYAGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVDRDRTVLAQN 562 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 563 GVVVDLRKGRAEVVGQMQVGNLYVDGVSMGDVDADTLADRTNLGTGGVVSITCVIDNRTS 622 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D I + + V T+ DL D + + + + L Sbjct: 623 RLLEHPTVSTTGFSDDDR---GIVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKL 679 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 680 MDSKYKREPVILPTIV 695 >gi|58038569|ref|YP_190533.1| metal-dependent hydrolase [Gluconobacter oxydans 621H] gi|58000983|gb|AAW59877.1| Metal-dependent hydrolase [Gluconobacter oxydans 621H] Length = 552 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 197/554 (35%), Positives = 319/554 (57%), Gaps = 5/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L FLPLGG GEIGMN LY W+ IDCG+ F +D P +++ PD TFI Sbjct: 4 KQDGLSFLPLGGTGEIGMNFNLYCLTKNGHDTWLAIDCGIGFSGNDTPEAEVLMPDPTFI 63 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++L + ITHAHEDH GA+ LW +L PVYA+PFA +L K ++ ++ Sbjct: 64 ADRARDLCGLVITHAHEDHLGAVAHLWPYLRCPVYATPFAAAVLRRKLQEAHLNNQVKIH 123 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G + DVG F ++ V V HS+ E A+ +R+P G IVHTGDWKLD++ ++G VTD + Sbjct: 124 VIRPGSRFDVGPFDLQFVSVTHSVAEAQAVALRTPHGLIVHTGDWKLDENPLVGPVTDLE 183 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+LA++ DSTN ++ G SE ++K + +++ +G + VT F+S+V+R+ Sbjct: 184 TFGKLGDEGVLAMVGDSTNVLKPGKSESEADVRKGLTELIAGLEGRIAVTCFASNVARVE 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI A+ GR ++++G SL+ + + A + G + FL+++ + L++I TGS Sbjct: 244 SIAKAAQASGRVVMIVGRSLRNLETAARECGYFQDLPPFLTEQDARDVEDDNLLMIITGS 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSAL++++ N+ L E DTVI+SSR IPGNE A+ +++ L +GV V+ + Sbjct: 304 QGEPRSALSRIASDTHPNIALGEGDTVIYSSRMIPGNEQAVMAVQDNLSRRGVTVLTDK- 362 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VH SGH D++ +Y+ +RP+ + HGE HL AH LA + G + + +G + Sbjct: 363 DAKVHTSGHATSEDIRTLYRIVRPKYSIPTHGEWRHLTAHAALAHEMGAEPI-LLEDGDI 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 L L P ++++D G DG + +A RR++ F G + + +D+ + G Sbjct: 422 LNLSPGEVKVVDTAPTGRLALDGGRLLPMTGGVLAARRKMLFNGIVLASFAVDDEGYVIG 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P+I G+ D D + + + + +P R+D R++ +ALR L + Sbjct: 482 DPKISAPGLLESD-DPESVR--IQEEFADAIDQIPDELRQDDAAFRDAAKTALRRALGRK 538 Query: 542 WGKKPLVTVFINKI 555 K+PLV V + ++ Sbjct: 539 LQKRPLVDVHLLRV 552 >gi|326330100|ref|ZP_08196412.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] gi|325952110|gb|EGD44138.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] Length = 561 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 170/552 (30%), Positives = 285/552 (51%), Gaps = 13/552 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GE+G NM ++ Y + +++DCGV FP++ PGVDL+ PD I Sbjct: 19 LRVTPLGGLGEVGRNMTVFEY----DGRLLIVDCGVLFPEEQQPGVDLILPDFGPIRDRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA L +P+ S + LL +K R+ + + + Sbjct: 75 GDVEALVLTHGHEDHIGATPYLLRERQDIPLVGSELTLALLGSKLREHRLRETVQHKV-R 133 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD + G F +E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + G +TD + Sbjct: 134 EGDTISFGPFELEFVAVNHSIPDALAVAIRTGAGLVLHTGDFKMDQLPLDGRITDLRAFA 193 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G +EK I I + + + ++V F+S V R++ ++ Sbjct: 194 RLGEEGVDLFLTDSTNAEVPGFTTAEKKIAPAIEQVFRESDQRIIVACFASHVHRVQQVL 253 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A GRK+ +G S+ R + +A D+G + + + + + P E++++++TGSQG Sbjct: 254 DSAVAHGRKVAYVGRSMVRNMQIAADLGYLHVPEDVIVDAKELAELPPERVVMVSTGSQG 313 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ G V + DTV+ +S IPGNE ++ + N L G V+ + Sbjct: 314 EPMSALSRIANGTHNFVHIEPGDTVLLASSLIPGNENSVYRVINGLARLGANVVHKG-NA 372 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGH +L Y +RP+ ++ +HGE HL+A+ +LA Q G+ V +G ++ Sbjct: 373 LVHVSGHASAGELLYCYNIVRPRNVMPVHGEVRHLLANGDLARQTGVESVVYAEDGVVVD 432 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGH-LSVNVLLDNHYNIFGV 482 L EI +V G DG +G + + RR LS G + V+ + + Sbjct: 433 LIDGKAEIAGKVECGYVFVDGTTVGDVTESELKDRRILSEEGFVSIIVVVDSVNGVVSSG 492 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 PEI G D I + ++K V + + D L+++I + Sbjct: 493 PEIHARGHVWPDNAFDPIKQPIVKAVNRAISE----GATDTYQLQQAIRRTFGRWVSSTH 548 Query: 543 GKKPLVTVFINK 554 ++P++ + + Sbjct: 549 RRRPMIIPVVIE 560 >gi|302335750|ref|YP_003800957.1| RNA-metabolising metallo-beta-lactamase [Olsenella uli DSM 7084] gi|301319590|gb|ADK68077.1| RNA-metabolising metallo-beta-lactamase [Olsenella uli DSM 7084] Length = 553 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 173/559 (30%), Positives = 287/559 (51%), Gaps = 14/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +PLGG+ IG NM + Y +++D G+ FP D+ PG+DLV PD +++ Sbjct: 4 KSSPLRIIPLGGLDGIGKNMTAFEY----ENDMVLVDAGLMFPDDEQPGIDLVLPDYSYV 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L I ITH HEDH GAL L L VP+Y+S +G++E K R++ Sbjct: 60 LENEEKLRGIIITHGHEDHTGALPYLLMDLGRKVPIYSSKLTLGIIEGKLAEHRLNA-PK 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 Q G +++G FSI+ + HSIP + + +R+P G+++HTGD+KLD I G + Sbjct: 119 FREVQNGTHINLGTFSIDFFSMTHSIPAALGVYMRTPAGSVMHTGDFKLDQTPIDGVTPN 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++ + G+ L+ DSTNA R G SE + + I+KNA G V V +FSS + R Sbjct: 179 YQAIGRFSSLGVDLLLSDSTNATRPGFTPSESAVGPALRHIIKNAPGRVFVASFSSHIHR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ I D A +GRK+V+ G S+ +A ++G ++ D + P ++++V+ Sbjct: 239 LQQICDAATAVGRKVVVTGRSMVTNTKIARELGYLRISDGDIIDAFEVDDIPDDKIVVMC 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ G+ +++ + DTVI S+ +PGNE ++ I N L + G + Sbjct: 299 TGSQGEPMSALARMANGDHKSLTITANDTVIISATPVPGNEKSVQSIVNSLAKIGCTI-F 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + VHVSGH +LK M RP + +HGE +HL AH LA Q GI + Sbjct: 358 DKSSTLVHVSGHGSQEELKLMLAMARPHYFMPVHGEAVHLRAHAHLAEQMGIRSDHIFIA 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L + + V G+ DG + + R++L+ G ++ V + Sbjct: 418 DNGDALEVRNGKVSWGAPVESGIVYVDGLSVTDADPIVFRDRQKLASDGIVTCVVTVSKR 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 G E+ G+ ++ + +V +V + + LR++ + L + Sbjct: 478 TGKVGGVELSCRGVSFAI---DELMGDIQDSVRESVEGSARKEGITMDTLRKTARNRLSN 534 Query: 537 LLKKVWGKKPLVTVFINKI 555 L +P+V + ++ Sbjct: 535 YLWGKTRTRPMVIPVVMEV 553 >gi|269792092|ref|YP_003316996.1| beta-lactamase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099727|gb|ACZ18714.1| beta-lactamase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 572 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 185/556 (33%), Positives = 296/556 (53%), Gaps = 17/556 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL ++PLGG+GEIG N++ YG + I+IDCG+ FP++D+ G+DL+ PD++F+ + Sbjct: 27 KELKWIPLGGMGEIGKNISALQYG----DEMIVIDCGLKFPEEDMLGIDLLIPDVSFLEQ 82 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + IFITH HEDH G L + L VPVYA+ IGL++ K K Sbjct: 83 NRGKIRGIFITHGHEDHIGGLPYVLPKLDVPVYATRLTIGLIKNKLAEVCPRYKPVFHEI 142 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AGD VD+G+FS+ ++ V HSIP+ +A IR+P G ++HTGD+KLD I G TD + Sbjct: 143 GAGDTVDLGSFSVRAIAVCHSIPDALAYGIRTPAGVVLHTGDFKLDAQPIDGRTTDYGAF 202 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRS 242 +G EG+L ++ DSTN REG SE+ + + + + K +++ TF+S++ R + Sbjct: 203 AELGREGVLLMLSDSTNVEREGFTQSERTVGRTFEQLFRLHKDKRIVIATFASNLHRAQQ 262 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 + +IA + RK+ L+G S+ V +A +G + D LF+ + +++V+ TGS Sbjct: 263 VFNIAMRYNRKVALVGRSMIAYVDLARKLGYVSAPDDLFIPAQEADGMQPNRVVVLTTGS 322 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP S L +S+GE R +KL +D V+ S+ IPGNE + N L G V+ E Sbjct: 323 QGEPFSGLVLMSKGEHRQIKLGNRDLVVISATPIPGNEKLVSRTINMLFSCGCEVVYERD 382 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 + +HVSGH +LK M + P+ V +HGE H V H +LA G+ V + NG Sbjct: 383 QA-IHVSGHASREELKMMISLVNPRCFVPVHGEYRHQVRHAQLARDLGVPAKGVFVMSNG 441 Query: 420 KMLRLF-PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 +L L + V G + DG +G+F + +RR+L+ G L++ V L + Sbjct: 442 DVLSLSQGGKGSVEGRVQAGTIMVDGLAVGEFQGSLLKERRELAQDGILTIAVALGPDGS 501 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 ++ G + D ++ L + V+ + +R +I + R +L Sbjct: 502 -VRGVDMDSRGFL-HRQDAKDLYGELERAVVKALEAPMG-----DDAMRTAIRKSAREVL 554 Query: 539 KKVWGKKPLVTVFINK 554 + P + + + Sbjct: 555 SRYTKGYPAIVPLLVR 570 >gi|76787188|ref|YP_330380.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76562245|gb|ABA44829.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] Length = 559 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 277/557 (49%), Gaps = 11/557 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 6 LKPEEVGVYAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + A+ ITH HEDH G + L ++P+YA P A+ L++ K + + Sbjct: 62 IVENIDRIKALVITHGHEDHIGGIPFLLKQANLPIYAGPLALALIKGKLEEHGLLRDATL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++ S+ R HSIPE + +VI +P G ++ TGD+K D + + D Sbjct: 122 YEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVG-EPADL 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G +G+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 181 HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKIVGQSIMKIIEGIEGRIIFASFASNIFRL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + I++G IK F+ +++++ T Sbjct: 241 QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKHLHASEVLIMCT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +ALA+++ G R V L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 301 GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + +HGE H LA+ GI + + Sbjct: 361 KIN-NIHTSGHGGQQEQKLMLRLIKPEYFMPVHGEYRMQKVHAGLAVDTGIPKENIFIME 419 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I DG IG + R LS G + +D + Sbjct: 420 NGDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDS 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I+ G Y + G + + + + + + ++ + +I +ALR Sbjct: 480 KMILAGPDILSRGF-IYMRESGDLIRESQHILFNAIRIALKNKDASIQSVNGAIVNALRP 538 Query: 537 LLKKVWGKKPLVTVFIN 553 L + ++P++ + Sbjct: 539 FLYEKTEREPIIIPMVL 555 >gi|19553174|ref|NP_601176.1| metallo-beta-lactamase superfamily hydrolase [Corynebacterium glutamicum ATCC 13032] gi|62390810|ref|YP_226212.1| hydrolase of metallo-BETA-lactamase superfamily [Corynebacterium glutamicum ATCC 13032] gi|18266923|sp|P54122|RNJ_CORGL RecName: Full=Ribonuclease J; Short=RNase J gi|11967652|emb|CAC19480.1| hypothetical protein [Corynebacterium glutamicum] gi|21324740|dbj|BAB99363.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Corynebacterium glutamicum ATCC 13032] gi|41326148|emb|CAF20311.1| HYDROLASE OF METALLO-BETA-LACTAMASE SUPERFAMILY [Corynebacterium glutamicum ATCC 13032] Length = 718 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 282/555 (50%), Gaps = 15/555 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 153 NGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIED 208 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + A+ +TH HEDH GA+ L +P+ AS F + L+ AK R K+ I Sbjct: 209 HLHRVDALVVTHGHEDHIGAIPWLLKLRNDIPILASRFTLALIAAKCKEHRQRPKL--IE 266 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D G F+I VNHSIP+ + L I++P G ++HTGD KLD G TD + Sbjct: 267 VNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGRPTDLPA 326 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+ ++CDSTNA G SE + + ++ +AK V++ +F+S+V R+++ Sbjct: 327 LSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQA 386 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 +D A RK+ G S+ R + +A +G +K +S + ++++I TG+ Sbjct: 387 AVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGT 446 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 447 QGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTGR- 505 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +NG Sbjct: 506 DAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVVLAQNG 565 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ + +++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 566 VVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGR 625 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P + G D + + + TT+ DL D + + + L + Sbjct: 626 LLERPTVQTSGFS---EDAKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFV 682 Query: 539 KKVWGKKPLVTVFIN 553 ++ W ++P++ + Sbjct: 683 EQKWKRQPVIMPTVI 697 >gi|314923873|gb|EFS87704.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966070|gb|EFT10169.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314981843|gb|EFT25936.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090768|gb|EFT62744.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315094920|gb|EFT66896.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315104242|gb|EFT76218.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|327328051|gb|EGE69820.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL103PA1] Length = 557 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 169/561 (30%), Positives = 296/561 (52%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 6 LQPDVLRIIPLGGLGDVGRNMSCYEI----NGEMLVIDCGVLFPEDDHPGVDLLLPGLDY 61 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 62 LDEEKLARVKALVLTHGHEDHIGAVPYLLKRRSDIPIYGSKLTLALVEAKLREHRIKGYK 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 122 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRIT 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + AK ++V F+S V Sbjct: 182 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVI 297 R++ ++++A + RK+ +G S+ R ++VA D+G + + Y ++++I Sbjct: 242 RVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPGNTVIELRDLDHYRDNEVVII 301 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 302 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGATVV 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ V Sbjct: 362 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDEKNVVL 420 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ +V L DG +G+ + + RR L G LSV ++D Sbjct: 421 VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT 480 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ P + G +G + + ++ + D L++ + + Sbjct: 481 RSASVVSRPAVQARGFA----EGDSVFAEITDQIVAELEKAMAGGMDDTHRLQQVVRRTI 536 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 537 GRWVSRSLRRRPMIVPVVVKI 557 >gi|260655319|ref|ZP_05860807.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] gi|260629767|gb|EEX47961.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] Length = 584 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 170/560 (30%), Positives = 287/560 (51%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L F+PLGG+GEIG NM + G +++DCG+ FP +++ G+D V PD +++ Sbjct: 35 SRQTLEFIPLGGLGEIGKNMYVLRCG----DDILIVDCGMMFPDEEMLGIDFVIPDTSYL 90 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + I +TH HEDH GAL + VP+YA+ +GL+E K K Sbjct: 91 DENKDKIRGIVVTHGHEDHIGALPFVLPKYDVPLYATRLTLGLIEHKLTESSPRFKPQLN 150 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 AG++V +G F++ + V HSIP+ +A+ + +P+G + TGD+KLD + G TD Sbjct: 151 ELAAGEEVKLGCFTVRFIAVCHSIPDAVAVAVDTPLGTAILTGDFKLDPTPVDGRGTDYA 210 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRI 240 +L ++G +G+L L DSTN R G SE+ + ++ ++++ K +++++F+S+++R+ Sbjct: 211 TLASLGAKGVLLLAADSTNVERPGFTPSEQTLIPSLNRLLRDYPKQRIIISSFASNLNRV 270 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GR + G S+ V +A +G + + + + + Y +L+V+ T Sbjct: 271 QLVLDAAARFGRHVAFAGRSMVNNVDMATKLGYLTSEPGVVVPLQEIDRYDPSELVVMTT 330 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP S L +S G+ VKL D V + IPGNE + NRL E G V+ E Sbjct: 331 GSQGEPFSGLVLMSTGQHHKVKLTAGDVVALFATPIPGNERTVSRTINRLFELGCEVLYE 390 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 E +HVSGH +LK M RP+ V +HGE LV H LA + G+ V + Sbjct: 391 K-EQQLHVSGHASREELKIMLNLTRPKYFVPVHGEYRMLVRHGRLAQETGVPEGNVFLLH 449 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L + +V G + DG +G+ + +R+ L+ G + V+++ D Sbjct: 450 NGDVLTVTSSGASADKQVPAGDVMVDGLALGEKESSLVGERQDLAENGVMVVSIVTDASG 509 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+ G + D I + + V V D L+R + + L Sbjct: 510 GLVRDPQFESYG-QIHLDDAAAIRQEFVDAVRRAVKRCG----NDESLIRRQVVLRCKEL 564 Query: 538 LKKVWGKKPLVTVFINKISR 557 L+K V I+++ + Sbjct: 565 LRKYIHSSSCVIPVISRLEK 584 >gi|315655099|ref|ZP_07908001.1| metallo-beta-lactamase [Mobiluncus curtisii ATCC 51333] gi|315657043|ref|ZP_07909928.1| metallo-beta-lactamase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315490580|gb|EFU80203.1| metallo-beta-lactamase [Mobiluncus curtisii ATCC 51333] gi|315492435|gb|EFU82041.1| metallo-beta-lactamase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 564 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 297/558 (53%), Gaps = 15/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L +PLGG+GE+G NM + + K +++DCGV FP++ PGVDL+ PD T+I Sbjct: 15 QPDVLRVVPLGGLGEVGRNMTVLE----TEGKILIVDCGVLFPEEIQPGVDLILPDFTYI 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + +TH HEDH GA+ L +PVY S + +E K + R+ Sbjct: 71 QDRMADVVGVVLTHGHEDHIGAVPYLLKLREDIPVYGSHLTLAFVEPKLMEHRL-PTTNL 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G+++D+G F +E VNHSIP+ +A+++R+ G+ + TGD+K+D + G +TD Sbjct: 130 RVKAEGERLDLGPFHLEFCAVNHSIPDALAVMVRTKAGSALITGDFKMDQLPLDGRITDL 189 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G G+ DSTNA G SE+ I + D+ +A G ++V +F+S V R+ Sbjct: 190 RAFARWGEAGVDLFCVDSTNAEVPGFITSEREIGPVLEDVFLHATGQIVVASFASHVHRV 249 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ A + RK+ L+G S++R +++A + G + D + + + P E+ + +AT Sbjct: 250 QQVLNAAAKSNRKVALVGRSMERNMTIAAEAGYMTVPDGVLIDLKDVNSLPPERRVYMAT 309 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R + + + DTV+ +S IPGNE ++G + N+L+ G +V+ + Sbjct: 310 GSQGEPMAALSRIANRSHRTISIGQGDTVVLASSLIPGNENSVGRVINQLIRLGAQVVHK 369 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 VHVSGH +L Y ++P+ ++ IHGE HLVA+ + A++ G+ V Sbjct: 370 G-NSRVHVSGHAATGELLYAYNIVKPKNVMPIHGEIRHLVANGKHAVKTGVDPRRVMLAE 428 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G + + +I+ +V DG IG+ + + RR L+ G ++V V+++ + Sbjct: 429 DGVCVEVKNGEAQIVGQVPCDFIYVDGTSIGEIGESELYDRRVLAQEGFVAVYVVMEMST 488 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P ++ G+ + + + + + + + +++ + L Sbjct: 489 GTILAGPTVIARGVA----ENDDVFRDIEPAIADALSAAAADGQANVRDMERVARRTLGR 544 Query: 537 LLKKVWGKKPLVTVFINK 554 + K + P++ + + Sbjct: 545 WVSKRLKRAPMIVPLVLE 562 >gi|313836603|gb|EFS74317.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314928112|gb|EFS91943.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314972111|gb|EFT16208.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] gi|328907597|gb|EGG27361.1| Zn-dependent hydrolase [Propionibacterium sp. P08] Length = 563 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 167/561 (29%), Positives = 295/561 (52%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ + L +PLGG+G++G NM+ Y + + ++IDCGV FP+DD PGVDL+ P + + Sbjct: 12 LQPDALRIIPLGGLGDVGRNMSCYEI----NGEMLLIDCGVLFPEDDHPGVDLLLPGLDY 67 Query: 61 I-MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + + + A+ +TH HEDH GA+ L +P+Y S + L+EAK R+ Sbjct: 68 LDEETLSKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYK 127 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + F +E + VNHSIP+ +A+ +R+ G +++TGD+K+D + G +T Sbjct: 128 LNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGILINTGDFKMDQLPLDGRIT 187 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+ M DSTNA G SE I+ I + + A ++V F+S V Sbjct: 188 DLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKANKKLIVACFASHVH 247 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ ++++A RK+ +G S+ R ++VA D+G + + + Y ++++I Sbjct: 248 RVQQVLNMAVHHNRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDVDHYRDNEVVII 307 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 +TGSQGEP SALA+++ E R++++ E DTV+ +S IPGNE A+ + N L + G V+ Sbjct: 308 STGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGATVV 367 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + VHVSGH +L Y +RP+ ++ IHGE HLVA+ +LA G+ + Sbjct: 368 HKG-NALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLARATGVDEKNIVL 426 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V +G ++ L ++ ++ L DG +G+ + + RR L G LSV +D Sbjct: 427 VEDGGVIDLVDGVPRVVGKIDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTAVDT 486 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P I G+ + + + ++T + + + D L++ + + Sbjct: 487 RSATVVSRPAIQARGVA----ENDSVFAEITDQIVTELENAMKGGMDDTHRLQQVVRRTI 542 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 + + ++P++ + KI Sbjct: 543 GRWVSRSLRRRPMIVPVVVKI 563 >gi|94496464|ref|ZP_01303041.1| metallo-beta-lactamase hydrolase subunit [Sphingomonas sp. SKA58] gi|94424210|gb|EAT09234.1| metallo-beta-lactamase hydrolase subunit [Sphingomonas sp. SKA58] Length = 545 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 213/551 (38%), Positives = 314/551 (56%), Gaps = 11/551 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL+FL LGG GEIGMN+ LYG KW+M+D G++F PGV+L+ PD++FI Sbjct: 5 NELLFLALGGSGEIGMNVNLYG----CQGKWVMVDLGLTFADPAYPGVELILPDLSFIED 60 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R +L+ I +TH HEDH GA+ L + L VP+YA+PF GL+ K E ++ + Sbjct: 61 RRDDLLGIVLTHGHEDHIGAIPYLAADLGVPLYATPFTAGLIRLKLEEEGLTNDVELNVI 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +G F V + HSIPE A++I +P G I HTGDWKLD+ +LG + + L Sbjct: 121 DNEGSFALGPFGFRYVPLAHSIPEGNAVLIDTPYGRIFHTGDWKLDERPLLGQPSTPEEL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG+EG+LAL+CDSTN SE +++ + + +AKG VLVTTF+S+ +R++++ Sbjct: 181 SAIGDEGVLALVCDSTNVFNAEASGSEGDVREGLMQTVASAKGRVLVTTFASNAARLQTL 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A GRK+ + G SL R++ A G +K + + PR ++++IATG QG Sbjct: 241 GEVANATGRKLCVAGRSLDRIIGTAKAAGYLKDFPPTVDWDDVMALPRSEVMIIATGGQG 300 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+AL++++ +KLAE D V+FSS+ IPGNE+AIG I+N L GV ++ + + Sbjct: 301 EARAALSRIAFNSHP-IKLAEGDMVVFSSKQIPGNEIAIGRIQNALATAGVLMVTDR-QA 358 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP +L+ MY+WIRP +L+ +HGE H+ L L GI P NG +LR Sbjct: 359 EVHVSGHPGRPELEAMYRWIRPDILLPVHGERRHMAEQARLGLANGIRHAPVQSNGDLLR 418 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P EII G + DG +I I +RR+L G +SV V +D + G P Sbjct: 419 LAPGAPEIIGHQETGRLVLDGDVILPADGTTINERRKLGLHGQISVAVAIDRKGKLIGTP 478 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+P + D + + V + + Q + LRE + A+R + G Sbjct: 479 ALRTQGVPV-EEDKAAFLEEAAQEVGSVIAKGSQE----DEALRERVRLAVRRTATRWTG 533 Query: 544 KKPLVTVFINK 554 KKPLV V + + Sbjct: 534 KKPLVDVLLIR 544 >gi|84497074|ref|ZP_00995896.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649] gi|84381962|gb|EAP97844.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649] Length = 565 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 175/556 (31%), Positives = 286/556 (51%), Gaps = 18/556 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L +PLGG+GEIG NM +Y + + +++DCGV FP D PGVD++ PD T+I Sbjct: 20 NGLRVVPLGGLGEIGRNMTVYEHA----GRLLIVDCGVLFPDDSQPGVDVIIPDFTWIRD 75 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + AI +TH HEDH G + L +PV S + L+EAK R+ + + Sbjct: 76 RLDKVDAIVLTHGHEDHIGGVPYLLRERPDIPVVGSRLTLALIEAKLTEHRIKPRTIEVV 135 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 GD+ G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G VTD + Sbjct: 136 --EGDRRKFGPFDCEFIAVNHSIPDGLAVAIRTKAGLVLHTGDFKMDQFPLDGRVTDLRA 193 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ + DSTNA G +SE + I + + KG V+V++F+S V RI+ Sbjct: 194 FARLGEEGVDLFLPDSTNAEVPGFTVSEGELAPAIDKVFRETKGRVIVSSFASHVHRIQQ 253 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--SDESFGLYPREQLIVIATG 300 ++D A Q RK+ +G S+ R + +A ++G + + ++ +Q+ +IATG Sbjct: 254 VLDTAHQHKRKVAFVGRSMVRNMGIARELGYLTIPDGLVVKDLKALERLRPDQMTIIATG 313 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +ALA+++ + V++ DTV+ +S IPGNE AI + N L G V+ + Sbjct: 314 SQGEPMAALARMANRDHP-VEIMPGDTVLMASSLIPGNENAIYRVINELTRWGANVVHKG 372 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH +L Y I P ++ +HGE HL A+ ++A++ G+ V ++ Sbjct: 373 -NAKVHVSGHASAGELAYCYNIIEPTNVLPVHGEWRHLRANADIAIRTGVDADRVLIAQD 431 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L +I V GL D +G + + RR L+ G +++ ++D Sbjct: 432 GSVIDLIDGRAKITGNVPAGLVYVDAMTVGGATEETLHVRRTLAEEGVVTIVCIMDPDTG 491 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+ + G P D L+ K + V D +DL+ + + + A + Sbjct: 492 TLAEEPDYLAHGFPPDLLDFSAATPLIQKALTKAVAD----GIEDLEQIEDLVRRAASTW 547 Query: 538 LKKVWGKKPLVTVFIN 553 + + PL+ + Sbjct: 548 AHRTHRRSPLIIPVVV 563 >gi|296444809|ref|ZP_06886772.1| RNA-metabolising metallo-beta-lactamase [Methylosinus trichosporium OB3b] gi|296257757|gb|EFH04821.1| RNA-metabolising metallo-beta-lactamase [Methylosinus trichosporium OB3b] Length = 556 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 233/551 (42%), Positives = 356/551 (64%), Gaps = 1/551 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E VF PLGGVGEIGMN ALYG+G P +RKW+M+DCG++FP +LPG+DL+ PD++F+ K Sbjct: 6 DEFVFAPLGGVGEIGMNAALYGFGPPRARKWLMVDCGLAFPGPELPGIDLMMPDVSFVEK 65 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++L+ + ITHAHEDH GAL LW L VYA+ FA GLLEA+R+ E + I ++ Sbjct: 66 IGRDLVGLVITHAHEDHIGALSFLWPKLRCTVYATRFAAGLLEARRLSEAGAPNIKLVTV 125 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 GD++D+G F++E + V HSIPE AL +R+P+G +HTGDWK+D + +G D Sbjct: 126 ATGDRLDIGPFNVELIAVAHSIPEANALALRTPLGLAIHTGDWKIDPEPRVGHRIDAARF 185 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 A+G+EG+ AL+CDSTN +REG SE + K + ++ A+ V+VTTF+S+V+R+RS+ Sbjct: 186 TALGDEGVDALICDSTNILREGDSFSESDVAKTLMRLIGEAEHRVMVTTFASNVARLRSV 245 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + A+ GR +V+ G +++RVV VA + G + FLS + F PRE+++V+ATGSQG Sbjct: 246 AEAAQAAGRSVVIAGRAMERVVQVARECGFLDGLPPFLSLDMFAALPREKIVVLATGSQG 305 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +A+A+++ E +KLA D VIFSSRAIPGN + + N+L +QG+ VI + + Sbjct: 306 EPHAAMARVADKEHPAIKLAAGDRVIFSSRAIPGNNREVNRVVNKLCDQGMEVITDQ-DH 364 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VH SGHP ++ +MY W+RP+ V +HGE HL H+ A G+ V RNG ++R Sbjct: 365 LVHCSGHPRRGEVAQMYDWVRPRAAVPVHGEGHHLTVHRAFAEARGVGQVHGARNGDIVR 424 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P + ++ + G LKDG ++ D + +R +L F G +S+ + +D ++ G P Sbjct: 425 LMPGELCVVGKTPSGRLLKDGDVLVGENDGAVRERAKLGFSGVVSLALAIDKRGDMVGDP 484 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +++ G+P G + +++ + + T +LP+ +R+DL +I A+R+ + VWG Sbjct: 485 DVMLAGLPKRGQSGEDMGEVVDEAIFRTFDNLPRQKRRDLDAAATAIERAVRASVNAVWG 544 Query: 544 KKPLVTVFINK 554 KKP V V I + Sbjct: 545 KKPQVHVLIIE 555 >gi|315649555|ref|ZP_07902640.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315275028|gb|EFU38403.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 572 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 165/554 (29%), Positives = 279/554 (50%), Gaps = 11/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG+GEIG NM YG + I+ID G+ FP ++ GVD + PDI +++ + Sbjct: 26 VRIFALGGLGEIGKNM----YGVEFKNEIILIDAGLKFPDAEMSGVDYIIPDIRYLIDNK 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH GA+ + + +P+Y IGL+ AK R+ + F Sbjct: 82 HKVKGLFLTHGHEDHIGAIPYVLRQIQMPIYGGALTIGLVRAKLEEHRLLDQSDLRVFHE 141 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + S+ R HSIP+ +V+ +P G IVHTGD+K D D + Sbjct: 142 DETISFRHLSVHFFRTTHSIPDAFGVVVETPYGPIVHTGDFKFDFTPED-RPADLHKILH 200 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG G+LALM DSTN+ R+G SE+ + +I + + G +L TF+S+V R++ +++ Sbjct: 201 IGKRGVLALMADSTNSERDGFTPSERTVGNSILRLFQECPGRILFATFASNVHRLQQVVE 260 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRKI ++G S+++V + ++G I+ D +F+ ++ Y +Q+++I TGSQGE Sbjct: 261 AAIRTGRKIAIVGRSMEKVFVIGQELGYIRVPDGMFIDAKAANRYRDDQVLIICTGSQGE 320 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL +++ G R++++ +DTVIFSS IPGN + + L+ G V Sbjct: 321 PNAALTRIASGAHRSIQIHPEDTVIFSSSPIPGNTQNVNRSIDLLMRAGAEVKYGSIL-D 379 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH DLK M +RP+ V IHGE ++ H+ LA+Q G+ V + G L Sbjct: 380 IHTSGHGCREDLKLMISSLRPKYFVPIHGEYRMMLNHRHLAVQVGVPDSNVYLMNIGNTL 439 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 LF + + G + + + +R QL+ G + V + ++ + Sbjct: 440 SLFRNYARKGRNIPSGDVYINNGELRTHEKELLEERVQLAHDGVVIVAITINRETRKLMS 499 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G Y D + + + + + R + + ++ L K+ Sbjct: 500 GPELITRGF-VYMQDSKPLLRRAEAMLRKQLNKAGEQREYNRAAWEQMTNNTLNRYFKRE 558 Query: 542 WGKKPLVTVFINKI 555 G+ P + I +I Sbjct: 559 LGRSPYIMPSIMEI 572 >gi|225351778|ref|ZP_03742801.1| hypothetical protein BIFPSEUDO_03375 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158122|gb|EEG71405.1| hypothetical protein BIFPSEUDO_03375 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 703 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 296/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 142 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFHYI 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R++ ++ Sbjct: 198 KDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCKEHRINPRL-- 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 256 VEVKGRDKLKVGPFNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 316 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETTIGPALDQAFAQATRKIIVASFSSHVHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 376 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKKAHDVQDDKLVYMCT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + I N+LV+ G RV+ Sbjct: 436 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKIINKLVQLGARVV-N 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 495 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ + + KRR L G +S V++D Sbjct: 555 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTEDELEKRRILGTEGFVSSFVVVDTET 614 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D D L++ + L S Sbjct: 615 ADVVAGPKIYLNAVAEDESE----FDKVRHQIVEQLQDAMMAGTHDTYKLQQIMRRTLGS 670 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 671 WVARQLHRKPMIVPVVADIAQD 692 >gi|117928709|ref|YP_873260.1| beta-lactamase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117649172|gb|ABK53274.1| beta-lactamase domain protein [Acidothermus cellulolyticus 11B] Length = 561 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 176/555 (31%), Positives = 280/555 (50%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+GE+G NM ++ +G + +++DCGV FP + PGVDL+ PD +I Sbjct: 19 LRIVALGGLGEVGRNMTVFEFG----GRLLIVDCGVLFPDPEQPGVDLILPDFDYIRGRL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ +TH HEDH GA+ L +P+ SP + E+K R++ + + Sbjct: 75 DAVEALVLTHGHEDHTGAVPFLLRERPDIPLVGSPLTLAFAESKLAEHRITPYTLTV--R 132 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G F E VNHSIP+ +A+ IR+P G ++HTGD+K+D + G +TD Sbjct: 133 EGSRERLGPFDCEFFAVNHSIPDGLAVAIRTPAGLVLHTGDFKMDQLPLDGRLTDLGGFA 192 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ LM DSTNA G E+ I + DI A ++V F+S V R++ ++ Sbjct: 193 RLGAEGVDLLMSDSTNAEIPGFVTPERDIAPVLRDIFSRAGRRIIVACFASHVHRVQQVL 252 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A GRK+ +G S+ R + VA D+G ++ L + P E++++I+TGSQG Sbjct: 253 DAAAAFGRKVAFVGRSMVRNMGVARDLGYLQVPGDLLVDAREIDALPPEKVVLISTGSQG 312 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ + V++ DTV+ +S IPGNE A+ + N L G VI + Sbjct: 313 EPLSALSRMANRDHP-VRIEPGDTVVLASSLIPGNESAVYRVINGLGRWGATVIHKG-NA 370 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L + RP V IHGE HL AH ELA G+ V NG + Sbjct: 371 LVHVSGHAPAGELLYVLNLTRPSNFVPIHGEWRHLRAHGELAKLTGVPADRVLLAENGMV 430 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGH-LSVNVLLDNHYNIF 480 + L I+ V G DG +G+ + + RR L G V V+ + Sbjct: 431 MDLVDGKASIVGAVHCGYVYVDGISVGEVTEASLKDRRILGEEGFVSVVVVVDAAAGKVV 490 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G PEI G D + + ++V + D D+ L + + + + + Sbjct: 491 GGPEIHARGSGIDDAALVDVLPKVHESVERAMAD----GMADIAELEQVVRRTVGRWVNE 546 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 547 TYRRRPMIIPMVVEV 561 >gi|119026314|ref|YP_910159.1| hypothetical protein BAD_1296 [Bifidobacterium adolescentis ATCC 15703] gi|118765898|dbj|BAF40077.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703] Length = 659 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 295/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 98 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 153 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R++ + Sbjct: 154 KDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCKEHRINPTL-- 211 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 212 VEVKGRDKLKVGPFNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 271 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 272 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 331 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 332 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKQAHDVQDDKLVYMCT 391 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 392 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVV-N 450 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 451 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 510 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 511 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTET 570 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D +D L++ + L Sbjct: 571 ADVITGPKIYLNAVAEDESE----FDKVRHQIVEQLQDAMMQGTRDTYKLQQIMRRTLGG 626 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 627 WVARQLHRKPMIVPVVADIAQD 648 >gi|306836329|ref|ZP_07469309.1| metallo-beta-lactamase superfamily protein [Corynebacterium accolens ATCC 49726] gi|304567800|gb|EFM43385.1| metallo-beta-lactamase superfamily protein [Corynebacterium accolens ATCC 49726] Length = 721 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 180/556 (32%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L LGG+ EIG NM ++ YG + ++IDCGV FP PGVDL+ PD I Sbjct: 155 KDTLRIYALGGISEIGRNMTVFEYG----DELLIIDCGVLFPSSGEPGVDLILPDFGPIE 210 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K + Sbjct: 211 KKIDKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--FV 268 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V G F + VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 269 EVNEKSDVTYGCFRVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLP 328 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I N ++ NAK V++ +F+S+V R++ Sbjct: 329 ALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFKRLVANAKQRVILASFASNVYRVQ 388 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A GRK+ G S+ R + +A +G +K + + + ++I TG Sbjct: 389 AAIDAAVANGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKTMLITTG 448 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + DT+IFSS IPGNE A+ + N L + G VI Sbjct: 449 TQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPGNEEAVFGVINMLSQIGANVITNQ 508 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +N Sbjct: 509 -DVKVHASGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVARDRTVLAQN 567 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 568 GVVVDLRKGRAEVVGQLQVGHLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVIDNRTS 627 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + + V T+ DL D + + + + L Sbjct: 628 RLLEHPTVATTGFSDDDR---GVVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKL 684 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 685 MDSKYKREPVILPTIV 700 >gi|312116317|ref|YP_004013913.1| RNA-metabolising metallo-beta-lactamase [Rhodomicrobium vannielii ATCC 17100] gi|311221446|gb|ADP72814.1| RNA-metabolising metallo-beta-lactamase [Rhodomicrobium vannielii ATCC 17100] Length = 562 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 231/552 (41%), Positives = 356/552 (64%), Gaps = 1/552 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ELVFLPLGG+GEIG+N+ LYG G R+W+MIDCG++FP D PGVD+V PD+ FI Sbjct: 9 NPELVFLPLGGIGEIGLNVYLYGIGPEDDRQWLMIDCGITFPDDSEPGVDVVLPDLRFIE 68 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +R+NL I ITHAHEDH GA+ ++W L VPVY + FA LL +K ++P + Sbjct: 69 NDRQNLAGILITHAHEDHIGAVAEMWPKLRVPVYVTKFAAHLLRSKLQEHSHGSEVPIVE 128 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G + ++G F ++ V V HSIPE ++ IR+P GN++HTGDWK DD GD +D+ Sbjct: 129 MAQGARFNIGRFDVDLVTVAHSIPECNSVFIRTPAGNVLHTGDWKFDDTPAYGDPSDEAK 188 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G+EG+ AL+CDSTNA+ EG ++E+ + N+ ++ KG V +TTF+S+V+R+ S Sbjct: 189 FARLGDEGVRALICDSTNALVEGISVTEEVVATNLKLVIGRQKGRVALTTFASNVNRLIS 248 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I + A GR++VL+G ++ R+V A D G+ + + ++F PR++++ + TGSQ Sbjct: 249 ISEAARAAGREVVLVGRAMHRIVEAARDSGLWPEHLTYSDQDAFPSIPRDKVLALVTGSQ 308 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE ++ALA++++GE VK + D+VIFSSR IPGNE ++ I+N+L ++G+ +I E E Sbjct: 309 GEAQAALARIAKGEHPFVKFDQGDSVIFSSRTIPGNEDSVIRIQNQLADRGISIITEAHE 368 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+H SGHP +L RMY+ RPQ ++ +HGEP HL AH A GI + VR+GK++ Sbjct: 369 GPIHASGHPRRGELTRMYRLTRPQYVIPMHGEPRHLEAHATFAEGHGIMTLRGVRDGKLV 428 Query: 423 RLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 L P+ I D + G +DG L+ D + +RR+LS+ G+++V+V++ + Sbjct: 429 HLGPNSPHIADSGIPIGRLYRDGNLVLDAGDPCVTERRRLSWNGYIAVSVVISRSGDFAA 488 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G+PA D G + + L V V +P+ RRKD L+R++++ ++R+ ++ V Sbjct: 489 DPVVSMAGLPARDAKGLPMSERALSAVYNAVESIPRPRRKDPALIRDAVTRSVRAEMRLV 548 Query: 542 WGKKPLVTVFIN 553 WGKKPL +V ++ Sbjct: 549 WGKKPLCSVLVS 560 >gi|145295874|ref|YP_001138695.1| hypothetical protein cgR_1799 [Corynebacterium glutamicum R] gi|140845794|dbj|BAF54793.1| hypothetical protein [Corynebacterium glutamicum R] Length = 718 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 282/555 (50%), Gaps = 15/555 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 153 NGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIED 208 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + A+ +TH HEDH GA+ L +P+ AS F + L+ AK R K+ I Sbjct: 209 HLHRVDALVVTHGHEDHIGAIPWLLKLRNDIPILASRFTLALIAAKCKEHRQRPKL--IE 266 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D G F+I VNHSIP+ + L I++P G ++HTGD KLD G TD + Sbjct: 267 VNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGRPTDLPA 326 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+ ++CDSTNA G SE + + ++ +AK V++ +F+S+V R+++ Sbjct: 327 LSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQA 386 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 +D A RK+ G S+ R + +A +G +K +S + ++++I TG+ Sbjct: 387 AVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGT 446 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 447 QGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTGRD 506 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +NG Sbjct: 507 D-KVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVVLAQNG 565 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ + +++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 566 VVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGR 625 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P + G D + + + TT+ DL D + + + L + Sbjct: 626 LLERPTVQTSGFS---EDAKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFV 682 Query: 539 KKVWGKKPLVTVFIN 553 ++ W ++P++ + Sbjct: 683 EQKWKRQPVIMPTVI 697 >gi|237785709|ref|YP_002906414.1| hypothetical protein ckrop_1123 [Corynebacterium kroppenstedtii DSM 44385] gi|237758621|gb|ACR17871.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM 44385] Length = 719 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 162/556 (29%), Positives = 281/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L + LGG+ EIG NM ++ Y + ++IDCGV FP D PGVDL+ PD +++ Sbjct: 155 KDGLRIVALGGISEIGRNMTVFEY----HNRLLIIDCGVLFPSSDEPGVDLILPDFSYLE 210 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+ AS F L+ AK K+ I Sbjct: 211 DKMDRVEALVVTHGHEDHIGAIPWLLKLRSDIPIVASRFTCALIAAKCREHHQHPKL--I 268 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G F + VNHSIP+ + + +++ G ++HTGD KLD G TD Sbjct: 269 EVNETSHEKYGPFDLRFWNVNHSIPDCLGIALKTGAGLLIHTGDIKLDQTPTGGRPTDLP 328 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++ DSTN+ G SE + + ++ AK V++ +F+S+V R++ Sbjct: 329 ALSRFGDEGVDIMLADSTNSATPGFSGSEADVAPTLKRLVAEAKQRVIIASFASNVYRVQ 388 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A ++G + +S + +++++ TG Sbjct: 389 AAVDAAVAAGRKVAFNGRSMIRNMQIAEEMGYLDVPRNTIVSMDDAAKMAPHKVLLVTTG 448 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D ++ SS +PGNE A+ + N L + G V+ Sbjct: 449 TQGEPMAALSRMARREHRQITVRDGDLIVLSSSLVPGNEEAVFGVINMLSQIGAHVVTSK 508 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + VH SGH + +L +Y RP+ + +HGE HL A+K+LA+ G+ +N Sbjct: 509 -DAKVHTSGHGFAGELLFLYNAARPKNFMPVHGEWRHLRANKQLAISTGVREDNTVLAQN 567 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ L +++ ++ G DG +G + R Q+ G +SV V++DN Sbjct: 568 GVVVDLVDKHADVVGQIPVGNLYVDGVTMGDVNAEVLEDRAQMGEGGVISVTVVIDNRTG 627 Query: 479 I-FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P +V G + ++ + V T++DL D + + I + Sbjct: 628 MALEKPRVVASGFS---DESREMMHEVEDLVDNTLLDLSGEGENDPYRMAQQIKRRITKF 684 Query: 538 LKKVWGKKPLVTVFIN 553 + + W +KP V + Sbjct: 685 VGEKWRRKPFVVPTVV 700 >gi|254488609|ref|ZP_05101814.1| metallo-beta-lactamase family protein [Roseobacter sp. GAI101] gi|214045478|gb|EEB86116.1| metallo-beta-lactamase family protein [Roseobacter sp. GAI101] Length = 555 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 189/557 (33%), Positives = 307/557 (55%), Gaps = 3/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M +E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI Sbjct: 1 MSSERLIYLPLGGAGEIGMNAYVYGYGKPGKERLIVVDLGVAFPDMDTSPGVDLIIPDIA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + R + AIFITHAHEDH GA+ + L P+Y F + + K Sbjct: 61 WLEERRNQIEAIFITHAHEDHVGAIAHTYDRLRAPIYTRKFTANICKRKMSEHGHPDDAV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + VG F++ + ++HSIPE+ +LVI ++H+GD+K+D +G+ D Sbjct: 121 TTVAPWPTQTTVGPFTVGFLPMSHSIPESSSLVIDVAGDRLIHSGDFKIDMTPGVGEAYD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D + +G+ AL+CDSTN SE + I ++ A+G V+ TTF+S+V+R Sbjct: 181 PDLWADVSKDGVKALICDSTNVFSLNAGRSEATVGPEIEKLLGTAQGMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ D E+ GR +VLLG ++KR+V +++ G++K +S E PRE L+++ T Sbjct: 241 VKTLADAGERAGRSVVLLGRAMKRMVEASLESGVMKDFPPVISPEDARGVPRENLMLLVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQL+RG+ +++ E D +FSS+ IPGNE + + N E GV ++ + Sbjct: 301 GSQGERRAASAQLARGKYMGLEMKEGDMFLFSSKTIPGNERGVIKVMNAFSEMGVDIV-D 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 D+ HVSGH DL+ ++ ++PQ+L+ +HGE HL H ++A +G+ V NG Sbjct: 360 DSSGLYHVSGHANRPDLETLHDVVKPQILIPMHGEHRHLREHVKIANGKGMKGV-LAVNG 418 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L + ++ + V G DG D + R +++ GH++V V++D + Sbjct: 419 MMIDLSGNEPKVAEYVESGRTYLDGSTQIGAMDGVVRDRIRMALNGHVTVTVIMDENDEA 478 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + +G+P + +L + + +D L E + +R Sbjct: 479 LGDPWVDAMGLPEQGRSKSSLVDILEADLGQFLGRANAKTLRDDDKLHEGLKRTVRQSAN 538 Query: 540 KVWGKKPLVTVFINKIS 556 GKKP VT+ ++++S Sbjct: 539 DEIGKKPEVTIVVSRLS 555 >gi|320459067|dbj|BAJ69688.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 616 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 289/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 59 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 115 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 172 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 173 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 233 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + ++L+ + T Sbjct: 293 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFMCT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 353 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 412 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 472 DGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTDN 531 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 532 QEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 587 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 588 WVARQLHRKPMIVPVVADIAQD 609 >gi|299534721|ref|ZP_07048051.1| hypothetical protein BFZC1_01782 [Lysinibacillus fusiformis ZC1] gi|298729809|gb|EFI70354.1| hypothetical protein BFZC1_01782 [Lysinibacillus fusiformis ZC1] Length = 555 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 270/557 (48%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + +PLGGVGEIG M + + ++D G+ FP+D++ G+D+V PDIT++ Sbjct: 5 KNELIRIIPLGGVGEIGKAMYVVEI----DEELFVVDSGLMFPEDEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + IF+TH HED G++ + + PVY S I L + ++ Sbjct: 61 EENKERVKGIFLTHGHEDAIGSIAYVLQKIKAPVYGSKLTIALAKEHLKELPAPHQVKFF 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +++ + + HSIP+++ +V + G IVHTG++K D A D Sbjct: 121 EVTNRSRMNFNSTYVTFFHTTHSIPDSLGVVFHTSEGAIVHTGEFKFDQSATGKFKPDLA 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+ L+ +S A R G SE I++ + +A G +LV ++S+ RI+ Sbjct: 181 KMAQLGEDGVFILLSESCEAERPGYTTSEIVIEEQLSKTFHSAPGRILVAVYASNFIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + A++ RK+V++G L++ V + + +G + ++ + Y +++I+IATG Sbjct: 241 QVFAQAQKSFRKVVIVGKPLEKAVDLGVQLGYLTVEEDTIIPISEMQKYQDDEIIIIATG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++GEP AL ++ R R++K+ + DTV+ + PG EV + + N + + G ++ Sbjct: 301 NRGEPLDALEKIVRKHHRDIKIKQGDTVLITFTPSPGMEVQMANTMNSMSKAGAEILTSS 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH DLK M ++P+ + + GE L+AH +LA Q + + Sbjct: 361 KN--VHVSGHGSQEDLKLMLNLMQPKYFIPVQGEYRMLIAHSKLAQQLGMQKSQIFIADK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 419 GDIVEYKNNKMRMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRAQK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + ++ + + +++ I L + Sbjct: 479 KIASGPEILSRGF-VYVRESEELMIEASDIAKNVIEKYVGKETFEWTNIKQEIRDTLNTY 537 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 538 LFQKTKRRPMIIPIIME 554 >gi|169827184|ref|YP_001697342.1| hypothetical protein Bsph_1614 [Lysinibacillus sphaericus C3-41] gi|168991672|gb|ACA39212.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 555 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 270/557 (48%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + +PLGGVGEIG M + + ++D G+ FP+D++ G+D+V PDIT++ Sbjct: 5 KNELIRIIPLGGVGEIGKAMYVVEI----DEELFVVDSGLMFPEDEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + ++ + IF+TH HED G++ + + PVY S I L + ++ Sbjct: 61 EENKERVKGIFLTHGHEDAIGSIAYVLQKIKAPVYGSKLTIALAKEHLKELPAPHQVKFF 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +++ + + HSIP+++ +V + G IVHTG++K D A D Sbjct: 121 EVTNRSRMNFNSTYVTFFHTTHSIPDSLGVVFHTSEGAIVHTGEFKFDQSATGKFKPDLA 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+ L+ +S A R G SE I++ + +A G +LV ++S+ RI+ Sbjct: 181 KMAQLGEDGVFILLSESCEAERPGYTTSEIVIEEQLSKTFHSAPGRILVAVYASNFIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + A++ RK+V++G L++ V + + +G + ++ + Y +++I+I TG Sbjct: 241 QVFAQAQKSFRKVVIVGKPLEKAVDLGVQLGYLTVEEDTIIPISEMQKYQDDEIIIITTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++GEP AL ++ R R++K+ + DTV+ + PG EV + + N + + G ++ Sbjct: 301 NKGEPLDALEKIVRKHHRDIKIKQGDTVLITFTPSPGMEVQMANTMNSISKAGAEILTSS 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VHVSGH DLK M ++P+ + + GE L+AH +LA Q + + Sbjct: 361 KN--VHVSGHGSQEDLKLMLNLMQPKYFIPVQGEYRMLIAHSKLAQQLGMQKSQIFIADK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 419 GDIVEYKNNKMRMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRAQK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI+ G Y + ++ T + + +++ I L + Sbjct: 479 KIASGPEILSRGF-VYVRESEELMVEASDIARTVIEKYVGKDTFEWTNIKQEIRDTLNTY 537 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 538 LFQKTKRRPMIIPIIME 554 >gi|256850952|ref|ZP_05556341.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260661166|ref|ZP_05862080.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|282934133|ref|ZP_06339411.1| ribonuclease J 1 [Lactobacillus jensenii 208-1] gi|256616014|gb|EEU21202.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260548103|gb|EEX24079.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|281301747|gb|EFA94013.1| ribonuclease J 1 [Lactobacillus jensenii 208-1] Length = 560 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 284/561 (50%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 4 IKKNEVAVFAIGGLGEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + K Sbjct: 60 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKGKLDEHGILKTTE 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G ++ TGD+K D ++ Sbjct: 120 LHEEYEDTVLTFDKLSVTFFRTTHSIPDTLGIAVHTPLGAVIFTGDFKFDLTPVMNQPAP 179 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G+EG+LAL+ DSTNA SE+ + K++ +I+K G ++ TF+S++ Sbjct: 180 DFQRMAKLGDEGVLALLSDSTNAEVSAFTKSERFVAKSLNNIIKGIDGRIIFATFASNLY 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + ++ A + GRKI + G S++ + ID+G + L + + +++ Sbjct: 240 RVSTAVEAAIETGRKIAIFGRSMENGIQNGIDLGYLNVPKDLIVDANEINRLKPNEAMIL 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 300 CTGSQGEPLAALSRIADGTHRQISIQPGDTVIFSSNPIPGNTLSVNHLINKLMEAGANVI 359 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA G+ Sbjct: 360 HGKVN-NVHTSGHGGQEELKMMVRLAKPKYMIPVHGEYRMQVIHTHLAQDAGVPKENTFV 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 419 LSNGEVVAFSPEGSRIAGHIPAGDVFVDTSGTADVGNVVVRDRQILSEEGLVVAVATVDS 478 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR-RKDLKLLRESISSA 533 H + P+I+ G Y + + K V + + R +R++I + Sbjct: 479 KHQRVLAGPDILSRGF-VYMRESQDLISQAQKNVYHVLRTQMAKKPRPSENDIRKAIIAN 537 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++PL+ I + Sbjct: 538 LQDFLYARTERRPLILPMIIE 558 >gi|159043881|ref|YP_001532675.1| beta-lactamase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911641|gb|ABV93074.1| beta-lactamase domain protein [Dinoroseobacter shibae DFL 12] Length = 556 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 194/553 (35%), Positives = 307/553 (55%), Gaps = 3/553 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIM 62 E L++LPLGG GEIGMN +YGYG ++I++D GV+FP D PGVDL+ D++++ Sbjct: 3 ERLIYLPLGGAGEIGMNAYVYGYGPEGRERYILVDLGVAFPDMDTTPGVDLITADVSWLA 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + L AIF+THAHEDH G + L L PVYA F + K + + I Sbjct: 63 ERADRLEAIFVTHAHEDHVGGVSLLHGRLKAPVYARAFTGNIARRKMEEKGLDPDEVRIV 122 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + V+ G F + + V+HSIPE LVI SP G ++HTGD+KLD I+G+ D D Sbjct: 123 GAWPEVVEAGPFKVSYLPVSHSIPEAAGLVIDSPAGRVIHTGDFKLDPTPIVGEPFDPDL 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G+LAL+CDSTN SE + + ++ AKG V+ TTF+S+++R+RS Sbjct: 183 WREVSKDGVLALVCDSTNVFSPKPGRSEADVAPELKPLVAEAKGMVVATTFASNIARLRS 242 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + + + GR +VLLG ++KR+V+ ++ G++ + E+ G PR+ L++I TGSQ Sbjct: 243 LAEAGREAGRSVVLLGRAMKRMVTAGVESGVLTDFPPTIPPEAAGDIPRDNLMLIVTGSQ 302 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE R+A AQL+RG+ +L E D +FSS+ IPGNE + I N L E+GV ++ ++ Sbjct: 303 GERRAASAQLARGKYLGFELTEGDLFVFSSKTIPGNEKGVARIMNALSEKGVDLVDDEG- 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 HVSGH DL +++ + P+++V +HGE HL AH LA +G + NG M+ Sbjct: 362 GRYHVSGHANRPDLLEIHKLVNPKMVVPMHGEHRHLRAHARLAEAQGRRGI-LAPNGAMV 420 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L + +++ V G DG L+ D + R +++ GH+ V V++D + Sbjct: 421 VLSGNKPGVVEHVETGRTYLDGSLLVGAFDGVVRDRIKMALNGHVVVAVIIDEGDDPIED 480 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 G+P + +L+ V + + D L E+++ A+R + Sbjct: 481 AWAELRGLPEIGQSKADMQELVEYEVGQVLTRANRKTLDDDGRLEEAVTRAVRQVCVTEL 540 Query: 543 GKKPLVTVFINKI 555 G++P V+V I+++ Sbjct: 541 GRRPEVSVLISRL 553 >gi|121601638|ref|YP_989085.1| putative RNA-metabolising metallo-beta-lactamase [Bartonella bacilliformis KC583] gi|120613815|gb|ABM44416.1| putative RNA-metabolising metallo-beta-lactamase [Bartonella bacilliformis KC583] Length = 558 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 261/552 (47%), Positives = 395/552 (71%), Gaps = 1/552 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ELVFLPLGGVGEIGMN+A+YG+GS +SR+W+++D GVSF +LPG +L+ PDI F+ Sbjct: 6 ENELVFLPLGGVGEIGMNLAVYGFGSKNSREWLLVDMGVSFAGPELPGANLILPDIRFLE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 E+ N+ + +THAHEDHYGA+ DLW L +PVY +PF GLLE+KR + ++IP Sbjct: 66 NEKHNICGLVLTHAHEDHYGAVLDLWPKLQIPVYCTPFTAGLLESKRQSDFKFRQIPLNI 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 FQAGD VG+FSIE++ VNHSIPE ++L I + +GN++HTGDWK+D LG +TD+ Sbjct: 126 FQAGDCFQVGSFSIEAIAVNHSIPEAVSLAITTSLGNLIHTGDWKIDHTPSLGTITDEKR 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+G GILAL+CDSTNA ++G SE+ +++++ +I+ A+G V + TFSS++ R+RS Sbjct: 186 LRALGKRGILALLCDSTNAFQDGISPSEQDVQESLVEIIARAEGRVAIVTFSSNIGRVRS 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I A+ +GRK++L+G SLKR VA ++G + F+++E + R+ +++I TGSQ Sbjct: 246 IALAAKAVGRKVLLVGRSLKRSFLVAQELGYMNGLMPFITEEEYSDTQRKDVVLIVTGSQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +ALA++SR EMRN+ L+ DTV++SSR+IPGNE AI I+NR ++QG+++IA + Sbjct: 306 GEPCAALAKISRNEMRNIALSPGDTVVYSSRSIPGNEKAIIEIQNRFIDQGIKIIAN-DD 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L +MY WI+PQ+L+ +HGE +HL A LA Q GI V +RNG +L Sbjct: 365 ALVHVSGHPRRSELLQMYDWIKPQILIPVHGEAMHLSAQAALARQAGIKTVAEIRNGNIL 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P P+E+ID+ G KDG L+G +LGI++RR+LS+VGH+SV++ +++ +++ Sbjct: 425 RLAPGPVEVIDQAFIGRIYKDGRLLGDEDELGISERRKLSYVGHVSVSLHMNSKHDLLDD 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 ++ G+P D +G + +LL+ V + ++P+ +RK+ L++E+ A+RS + ++W Sbjct: 485 IGLIAYGLPKRDEEGMLLEDILLEVVENAINNIPRTKRKNSNLIQEATCRAVRSAINEIW 544 Query: 543 GKKPLVTVFINK 554 GKKP+ VF++K Sbjct: 545 GKKPICAVFLHK 556 >gi|289177471|gb|ADC84717.1| Metal-dependent hydrolase [Bifidobacterium animalis subsp. lactis BB-12] Length = 641 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 176/562 (31%), Positives = 294/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 82 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFNYI 137 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S +G +EAK R+ + Sbjct: 138 KDRLDKVDALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLGFVEAKCREHRIEPVMTQ 197 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +R+P G+++ TGD KLD + VTD Sbjct: 198 VEGR--DKLKVGPFNLEFVSVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRVTDL 255 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + + A ++V +FSS V R+ Sbjct: 256 VEFGKLGEQGIDLLMMDSTNAEVPGFVKPETSIGPALDQVFATATRKIIVASFSSHVHRV 315 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +++A D+G + + + + YP +L+ + T Sbjct: 316 QQVVDAAHKYGRKVVFVGRSMVRNMAIAADLGYLHLPEDTVIDVKKAKDYPDNKLVYMCT 375 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 376 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVV-N 434 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ GI V Sbjct: 435 RDNAAVHVSGHCNEGELLYMYNIVKPRNAMPIHGENRHLVANGLIAVKTGIEPENVVLAE 494 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G ++ L+ I+ V G DG +G+ D + KRR L G +S ++D Sbjct: 495 DGDVVDLYHGKAAIVGSVPCGYIYVDGDSVGELTDEELEKRRILGTEGFVSCFAVVDTDA 554 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P++ + + + + + ++ + D KD L++ + L Sbjct: 555 AEVVSGPKVYLNAVAEDESE----FEKVRHQIVEQLRDAMMTGTKDTHKLQQIMRRTLGG 610 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + ++ Sbjct: 611 WVSRELKRKPMIVPVVADVAAD 632 >gi|183602113|ref|ZP_02963481.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp. lactis HN019] gi|219683025|ref|YP_002469408.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis AD011] gi|241191345|ref|YP_002968739.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196751|ref|YP_002970306.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218606|gb|EDT89249.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp. lactis HN019] gi|219620675|gb|ACL28832.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis AD011] gi|240249737|gb|ACS46677.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251305|gb|ACS48244.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794338|gb|ADG33873.1| hypothetical protein BalV_1285 [Bifidobacterium animalis subsp. lactis V9] Length = 635 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 176/562 (31%), Positives = 294/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 76 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFNYI 131 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S +G +EAK R+ + Sbjct: 132 KDRLDKVDALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLGFVEAKCREHRIEPVMTQ 191 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +R+P G+++ TGD KLD + VTD Sbjct: 192 VEGR--DKLKVGPFNLEFVSVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRVTDL 249 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + + A ++V +FSS V R+ Sbjct: 250 VEFGKLGEQGIDLLMMDSTNAEVPGFVKPETSIGPALDQVFATATRKIIVASFSSHVHRV 309 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +++A D+G + + + + YP +L+ + T Sbjct: 310 QQVVDAAHKYGRKVVFVGRSMVRNMAIAADLGYLHLPEDTVIDVKKAKDYPDNKLVYMCT 369 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 370 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVV-N 428 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ GI V Sbjct: 429 RDNAAVHVSGHCNEGELLYMYNIVKPRNAMPIHGENRHLVANGLIAVKTGIEPENVVLAE 488 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G ++ L+ I+ V G DG +G+ D + KRR L G +S ++D Sbjct: 489 DGDVVDLYHGKAAIVGSVPCGYIYVDGDSVGELTDEELEKRRILGTEGFVSCFAVVDTDA 548 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P++ + + + + + ++ + D KD L++ + L Sbjct: 549 AEVVSGPKVYLNAVAEDESE----FEKVRHQIVEQLRDAMMTGTKDTHKLQQIMRRTLGG 604 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + ++ Sbjct: 605 WVSRELKRKPMIVPVVADVAAD 626 >gi|221194520|ref|ZP_03567577.1| ribonuclease J 1 [Atopobium rimae ATCC 49626] gi|221185424|gb|EEE17814.1| ribonuclease J 1 [Atopobium rimae ATCC 49626] Length = 554 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 179/555 (32%), Positives = 295/555 (53%), Gaps = 13/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +P+GG+ IG NM ++ YG ++ID G+ FP D+ PG+DLV PD T++++ Sbjct: 8 LKIIPMGGLDGIGKNMTVFEYG----NDMVLIDAGLMFPDDEQPGIDLVLPDYTYVLENE 63 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L AI ITH HEDH GAL L L VP+Y+S ++G +E K ++ + Sbjct: 64 HKLRAILITHGHEDHIGALPYLLMDLTRKVPIYSSKLSLGFIEGKLSEHSITG-VKLCEV 122 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G + GAF + + HSIP + +++P G+++HTGD+KLD I G + ++ Sbjct: 123 NDGSNIHFGAFDVTFFSMTHSIPAAFGVHMKTPAGSLMHTGDFKLDQTPIDGVRPNYAAI 182 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +EG+ L+ DSTNA R G SE + + I+KNAKG V V +FSS + R++ + Sbjct: 183 TKFASEGLDLLLSDSTNANRPGFTPSEAAVGPALRHIIKNAKGRVFVASFSSHIHRLQQV 242 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQ 302 D + +GRK+V+ G S+ VA D+G + D+ + ++++V+ TGSQ Sbjct: 243 CDASVAVGRKVVVTGRSMITNTKVARDLGYLNISDKNIVDAYDVDKLADDRIVVLCTGSQ 302 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SALA+++ GE +++ + +DTVI S+ +PGNE ++ I N L + G + + ++ Sbjct: 303 GEPLSALARMANGEHKSLTIRPQDTVIISATPVPGNEKSVQSIINSLSKIGCAI-YDKSK 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +LK + RP+ + +HGE +HL AH ELA Q GI + + NG Sbjct: 362 TLVHVSGHGSQEELKLVLGMARPKNFMPVHGEAVHLRAHAELAKQMGIPDKHIFILDNGD 421 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 L + I+ V G+ DG + + + + R++L+ G ++V V L Sbjct: 422 SLEMRSGKIKRGKSVESGVVFVDGLSVTESNPVVLRDRQRLAQDGIVTVVVTLVGRSRRA 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 GV E+ G+ D ++ V T V + + + +R++I ++L + L Sbjct: 482 GVVEVSGRGVSFATDD--ELMDGAQNLVRTQVDKFSKSEGSNPEAMRKNIRNSLSNFLWT 539 Query: 541 VWGKKPLVTVFINKI 555 +P+V + ++ Sbjct: 540 KTHTRPMVIPVVMEV 554 >gi|297205834|ref|ZP_06923229.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] gi|297148960|gb|EFH29258.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] Length = 560 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 164/561 (29%), Positives = 284/561 (50%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 4 IKKNEVAVFAIGGLGEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + VPVYA+PFA+ L++ K + K Sbjct: 60 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEVPVYATPFALALIKGKLDEHGILKTTE 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G ++ TGD+K D ++ Sbjct: 120 LHEEHEDTVLTFDKLSVTFFRTTHSIPDTLGIAVHTPLGAVIFTGDFKFDLTPVMNQPAP 179 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G+EG+LAL+ DSTNA SE+ + K++ +I+K G ++ TF+S++ Sbjct: 180 DFQRMAKLGDEGVLALLSDSTNAEVSAFTKSERFVAKSLNNIIKGIDGRIIFATFASNLY 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + ++ A + GRKI + G S++ + ID+G + L + + +++ Sbjct: 240 RVSTAVEAAIETGRKIAIFGRSMENGIQNGIDLGYLNVPKDLIVDANEINRLKPNEAMIL 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 300 CTGSQGEPLAALSRIADGTHRQISIQPGDTVIFSSNPIPGNTLSVNHLINKLMEAGANVI 359 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA G+ Sbjct: 360 HGKVN-NVHTSGHGGQEELKMMVRLAKPKYMIPVHGEYRMQVIHTHLAQDAGVPKENTFV 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 419 LSNGEVVAFSPEGSRIAGHIPAGDVFVDTSGTADVGNVVVRDRQILSEEGLVVAVATVDY 478 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR-RKDLKLLRESISSA 533 H + P+I+ G Y + + K V + + R +R++I + Sbjct: 479 KHQRVLAGPDILSRGF-VYMRESQDLISQAQKNVYHVLRTQMAKKPRPSENDIRKAIIAN 537 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++PL+ I + Sbjct: 538 LQDFLYARTERRPLILPMIIE 558 >gi|295425139|ref|ZP_06817844.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] gi|295065198|gb|EFG56101.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] Length = 559 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+D+L G++ V D ++ Sbjct: 3 IKNNEVAVFAIGGLHEIGRNMYCVQY----QDEIIIMDCGIKFPEDNLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + Sbjct: 59 LVKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKGKLEEHGILNTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFNKLSVSFFRTTHSIPDTLGIAVHTPLGVVVFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G+EG+LAL+ DSTNA + SE+ + K+++D++ KG ++ TF+S++ Sbjct: 179 DFQKMAKLGDEGVLALLSDSTNAEVQQFTKSERFVAKSLHDMITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ V ID+G + + L + + P E+++++ Sbjct: 239 RVSTAIQAAIDTGRKVAIFGRSMENGVQNGIDLGYLNLPEGLIVDADEINHTPPEKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQISLQPDDTVIFSSNPIPGNTLSVNHLINKLMEGGAHVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H ELA + G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLTKPKYMIPVHGEYRMQVIHTELAQEAGVPADNTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPEGARIAGHIPAGDVYVDTSGKADVGNVVVHDRQILSEEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + K +R++I Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELISQAQKHVYHVLRNEMAKTDKPKDSDIRKAIIEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPMIVE 557 >gi|171742292|ref|ZP_02918099.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC 27678] gi|171277906|gb|EDT45567.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC 27678] Length = 646 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 293/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 85 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFHYI 140 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + EAK ++ + Sbjct: 141 KDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFAEAKCKEHHINPTL-- 198 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG +++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 199 VEVKGRDKLKVGPYNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 258 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 259 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 318 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 319 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKQSHDVQDDKLVYMCT 378 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 379 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHEVYKVINKLVQLGARVV-N 437 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 438 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 497 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 498 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTET 557 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D D L++ + L S Sbjct: 558 ADVIAGPKIYLNAVAEDESE----FDKVRHQIVEQLRDAMMTGTHDTYKLQQLMRRTLGS 613 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 614 WVARQLHRKPMIVPVVADIAQD 635 >gi|262068265|ref|ZP_06027877.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] gi|291378003|gb|EFE85521.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] Length = 634 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 281/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ +PLGG+ E+G N + Y + I+ID G FP ++LPG+DLV PD +F+ Sbjct: 79 EKMYVIPLGGLEEVGKNCTIVQY----KDEIIIIDAGAIFPDENLPGIDLVIPDYSFLEN 134 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +YA L+++K V K Sbjct: 135 NKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYAGKLTNALIKSKFENFGVKKNLPKM 194 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + K+ VG F++E V+V HSI ++ +L I++P G++ TGD+K+D + + D Sbjct: 195 VEVGSRSKISVGKYFTVEFVKVTHSIADSYSLSIKTPAGHVFLTGDFKIDLTPVDNEKVD 254 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 255 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIIVAVFASHVHR 314 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A GRKI + G SL +V +A VG + L + + Y +++++ Sbjct: 315 IQQIIDNAAYFGRKIAIDGRSLLKVFEIAPSVGRLNIPKNLLIPISNVEKYKDNEVVILC 374 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N ++ V ++ Sbjct: 375 TGTQGEPLAALSRIAKNMHKHIMLREGDTVIISSTPIPGNEKAVSTNINNILRYDVDLVF 434 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M I P+ + +HGE L AH + A++ G+ + Sbjct: 435 KKL-AGIHVSGHGSKEEQKLMLNLINPKNFMPVHGEYRMLKAHMKSAIETGVPKDKILIT 493 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D Sbjct: 494 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKQ 553 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K ++ + + KD + L+ + L Sbjct: 554 TGKILSGPEMSTKGFVYY-KDSEDTMKEAQDLLLNKIRKEETYLGKDWQDLKGDVRDLLS 612 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 613 RFFYEKLKRNPIIVPMLLEI 632 >gi|154488210|ref|ZP_02029327.1| hypothetical protein BIFADO_01784 [Bifidobacterium adolescentis L2-32] gi|154083361|gb|EDN82406.1| hypothetical protein BIFADO_01784 [Bifidobacterium adolescentis L2-32] Length = 659 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 295/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 98 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 153 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R++ + Sbjct: 154 KDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCKEHRINPTL-- 211 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 212 VEVKGRDKLKVGPFNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 271 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 272 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 331 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 332 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKQAHDVQDDKLVYMCT 391 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 392 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVV-N 450 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 451 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 510 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 511 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTET 570 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D +D L++ + L Sbjct: 571 ADVITGPKIYLNAVAEDESE----FDKVRHQIVEQLQDAMMQGTRDTYKLQQIMRRTLGG 626 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 627 WVARQLHRKPMIVPVVADIAQD 648 >gi|325002556|ref|ZP_08123668.1| beta-lactamase domain protein [Pseudonocardia sp. P1] Length = 584 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 174/560 (31%), Positives = 279/560 (49%), Gaps = 16/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L LGG+GE+G NM ++ Y + +++DCGV FP DD PGVDL+ PD Sbjct: 36 LAKGGLRTFALGGIGEVGRNMTVFEY----EGRLLVVDCGVLFPSDDSPGVDLILPDFRA 91 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ A+ +TH HEDH GA+ L +PV S F + L+ AK R++ + Sbjct: 92 IEDRLDDIDALVLTHGHEDHIGAVPWLLRMRPDIPVVGSRFTLALVAAKCKEHRLTPHLQ 151 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +S GD+V G + E VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 152 EVS--EGDRVSHGGWDCEYFAVNHSIPDAVAVAIRTPAGLVLHTGDIKLDQLPLDGRLTD 209 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +G EG+ + DSTNA G E I I D+++ A +++ F+S V R Sbjct: 210 LAGFSRLGEEGVDLFLVDSTNAEVPGFVTPESDIGPVIADLVRRAPSRIILACFASHVHR 269 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GRK+ L G S+ R + +A D ++ D L + + P +QL++++ Sbjct: 270 VQQVLDAAHAHGRKVCLTGRSMVRNMGLADDHSLLNIPDGLLVDIDEAMRLPDDQLVLVS 329 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++RG+ R++ + DT+I +S IPGNE A+ + N L G V+ Sbjct: 330 TGSQGEPLAALSRMARGDHRSITIRPDDTIILASSLIPGNETAVFAVINGLTRLGATVVH 389 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L +Y +RP ++ +HGE HL A+ ELA + G+ V Sbjct: 390 QG-NAKVHVSGHAPAGELLFLYNAVRPSNVMPVHGEWRHLRANAELARKTGVPEDSVVIA 448 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG ++ L I V G DG +G + + R L G + + V +D Sbjct: 449 ENGVVVDLVDSKAGITGRVEVGQVYVDGLAVGDVGENTLGDRIALGEGGFIQITVAIDHK 508 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 P + G D K V + L D + + + + Sbjct: 509 TGRALSRPTLSGRGFS----DDPKALDAAQALVENELSRLENEGVSDPHRIAQGVRRVVG 564 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + ++P++ + + Sbjct: 565 RWVSDTYRRRPMIVPTVIAV 584 >gi|306822237|ref|ZP_07455619.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679] gi|309802284|ref|ZP_07696392.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022] gi|304554619|gb|EFM42524.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679] gi|308221167|gb|EFO77471.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022] Length = 646 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 85 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFHYI 140 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + EAK ++ + Sbjct: 141 KDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFAEAKCKEHHINPTL-- 198 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG +++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 199 VEVKGRDKLKVGPYNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDL 258 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 259 VEFGKLGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 318 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + T Sbjct: 319 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKQSHDVQDDKLVYMCT 378 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 379 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHEVYKVINKLVQLGARVV-N 437 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY +RP+ + IHGE HLVA+ +A++ G+ V Sbjct: 438 RDNAAVHVSGHCNEGELLYMYNIVRPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAE 497 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 498 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTET 557 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + + ++ + D D L++ + L S Sbjct: 558 ADVIAGPKIYLNAVAEDESE----FDKVRHQIVEQLRDAMMTGTHDTYKLQQLMRRTLGS 613 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 614 WVARQLHRKPMIVPVVADIAQD 635 >gi|317495418|ref|ZP_07953787.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316914477|gb|EFV35954.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 556 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 171/559 (30%), Positives = 287/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I+ID GV FP D++ G+D V PD ++ Sbjct: 5 IKKNEVGVAAIGGLGEIGKNTYAIQY----RDEIIIIDAGVKFPGDNILGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K + A+ ITH HEDH G L L + +P+Y P AIGL+ +K + + Sbjct: 61 IEKNIDKIKALVITHGHEDHIGGLPFLLRKVSLPIYGGPLAIGLIRSKLEEHNLLARAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + HSIP++ +++ +P GNIVHTGD+K D + T+ Sbjct: 121 NVIDEDTILEFKYLKVSFHNTTHSIPDSFGVIVNTPQGNIVHTGDFKFDFTPVG-QGTNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + AIG+EG+L L+ DSTN+ R SEK + K I +I++ K V+ TF+S+V R+ Sbjct: 180 HKMAAIGDEGVLCLLSDSTNSERGEFTQSEKEVGKTISNILRKEKHRVIFATFASNVYRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + GRKIV+ G S+++ + + ++G IK F++ + +L+++ T Sbjct: 240 KQVVEACIEHGRKIVVFGRSMEKAIKIGTELGYIKAPKDTFVNSKYLNQVDPNKLLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGE +AL++++ G + + + DTVIF+S AIPGN ++I + L + G VI Sbjct: 300 GTQGEELAALSRIANGTHKKITIMPTDTVIFASSAIPGNTLSINKNIDLLSKLGANVITS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M++ I+P+ + IHGE V H + A + I + Sbjct: 360 SVN-NVHTSGHGSKEEQKLMFRLIKPKYFMPIHGEYRMQVIHAQTAAECDIPLENSFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L L D I + DG IG + I R++LS G + V+V LD + Sbjct: 419 NGEVLALTSDSARIAGKFEASDVYVDGLGIGDIGSVVIKDRKELSEEGVIVVSVALDFKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I+ G + + ++ V TV+++ + +R I L Sbjct: 479 KKLLNNPDIISRGFVNIN-ESMELFGACKGVVKDTVLNILSDEEVGVYQIRHQIVEKLGE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L++ G+KP++ I ++ Sbjct: 538 FLEQEIGRKPVILPTILEV 556 >gi|329114693|ref|ZP_08243452.1| Ribonuclease J [Acetobacter pomorum DM001] gi|326696173|gb|EGE47855.1| Ribonuclease J [Acetobacter pomorum DM001] Length = 547 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 219/554 (39%), Positives = 329/554 (59%), Gaps = 10/554 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N +L FLPLGG GEIGMN+ LY G W+ IDCG+ F +D P +++ PD +FI Sbjct: 4 QNGDLAFLPLGGTGEIGMNLNLYRLG----DTWLAIDCGIGFSGNDTPEAEILVPDPSFI 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L + ITHAHEDH GA+ +W L PVY +PFA +L K R+ +P Sbjct: 60 VERKDKLAGLVITHAHEDHIGAVAHVWPMLQCPVYLTPFAAAVLRRKLAEARIM-DVPIH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q G + DVG F IE V V HS+PE ++V+R+P G +VHTGDWK D D ++G TD D Sbjct: 119 VIQPGARFDVGPFDIEFVPVTHSVPEAQSMVLRTPSGIVVHTGDWKFDPDPLVGPATDLD 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG EG+LAL+CDSTN M+ G SE +++++ +++ + KG + VT F+S+V+R+ Sbjct: 179 RLAEIGREGVLALVCDSTNVMKPGPSRSESEVRRSMTELVASLKGRIAVTCFASNVARVE 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I A+ GR +VL+G SL+ + + A D G + FL+++ P +Q+++I TGS Sbjct: 239 TIAMAAQAAGRTVVLVGRSLRNLDTAARDCGYLSGVLPFLTEQDVNDVPDDQILLIITGS 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSAL++++ N+ L E DTVI+SSR IPGNE AI +++ L +GVRVI + Sbjct: 299 QGEPRSALSRIAMDTHPNIALGEGDTVIYSSRMIPGNERAIMAVQDNLSRRGVRVITDR- 357 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGH D+++MY+ ++PQ +V +HGE HL A LA + GIA V + +G + Sbjct: 358 EHFVHVSGHATGGDVQKMYELLKPQHVVPVHGEWRHLTAQAALAQEMGIAPV-LLEDGDI 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P +E++D G DG + +A RR++ F G + + +D + G Sbjct: 417 LRLSPGKLEVVDTAPTGRLALDGNRLLPMNGGVLAARRKMLFNGMVIGSFAVDEEGFVIG 476 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++ G+ D D + + + + +P R D RE+ +ALR L + Sbjct: 477 EPKVSAPGLLDPD-DLESVR--VREEFANALDIIPDELRGDDVSFREAAKTALRRALGRK 533 Query: 542 WGKKPLVTVFINKI 555 K+PLV V + ++ Sbjct: 534 LQKRPLVDVHVLRV 547 >gi|154509079|ref|ZP_02044721.1| hypothetical protein ACTODO_01596 [Actinomyces odontolyticus ATCC 17982] gi|153798713|gb|EDN81133.1| hypothetical protein ACTODO_01596 [Actinomyces odontolyticus ATCC 17982] Length = 579 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 165/559 (29%), Positives = 292/559 (52%), Gaps = 15/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ L +PLGG+GE+G NM + Y K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 30 LEDGALRVIPLGGLGEVGRNMNVLEY----RGKLLVVDCGVLFPEETQPGVDLILPDFSW 85 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ + +TH HEDH GA+ L +P+Y S + + K R+ Sbjct: 86 IEDRMDDVVGLVLTHGHEDHIGAVPYLLKLRGDIPIYGSDLTLAFVAPKLREHRL-PDPG 144 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 GD++ VG F +E V V HSIP+ +A+ +R+ GN++ TGD+K+D + +TD Sbjct: 145 LNVVAEGDRLTVGPFDLEFVSVTHSIPDALAVFVRTDAGNVLITGDFKMDQLPLDRRLTD 204 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA+ G E+ I + + A G ++V +F+S V R Sbjct: 205 LRAFARMGEEGVDLFMVDSTNALVPGFITPEREIGPVLDQVFGEATGQIVVASFASHVHR 264 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +I+ A GR++ +G S++R + +A + G + + + + + G P Q + +A Sbjct: 265 VQQVINAAAHHGRRVAFVGRSMERNMRIAEEKGYLSIPEDIIVDLKGIGELPPSQRVYMA 324 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++S G R V + D V+ +S IPGNE ++ + N L G RV++ Sbjct: 325 TGSQGEPMAALSRMSVGSHRTVTIEPGDMVVLASSLIPGNENSVYRVINDLTRLGARVVS 384 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 ++ VHVSGH +L Y ++P+ ++ IHGE HLV + +LA++ GI V Sbjct: 385 KE-NAKVHVSGHASAGELIYCYNIVQPKNVMPIHGEVRHLVGNGQLAVKTGIDPQKVVLA 443 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G + L + V DG IG+ ++ + RR L G +S+ +++ Sbjct: 444 EDGVTVDLKDGVARVSGIVPCEYVYVDGRSIGEISEDELETRRTLGSEGFISIFAVVERD 503 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI IG + + + +L V + D +D +L++++ + Sbjct: 504 SGMVLAGPEIRAIG----MAEDDSVFEEILPDVTQALKDAAAPGGQDPYVLQQAMRRVIG 559 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 560 RWVARRLRRRPMIVPVVTE 578 >gi|258542707|ref|YP_003188140.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-01] gi|256633785|dbj|BAH99760.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-01] gi|256636844|dbj|BAI02813.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-03] gi|256639897|dbj|BAI05859.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-07] gi|256642953|dbj|BAI08908.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-22] gi|256646008|dbj|BAI11956.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-26] gi|256649061|dbj|BAI15002.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-32] gi|256652048|dbj|BAI17982.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655105|dbj|BAI21032.1| metal-dependent hydrolase [Acetobacter pasteurianus IFO 3283-12] Length = 547 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 219/554 (39%), Positives = 329/554 (59%), Gaps = 10/554 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N +L FLPLGG GEIGMN+ LY G W+ IDCG+ F +D P +++ PD +FI Sbjct: 4 QNGDLAFLPLGGTGEIGMNLNLYRLG----DTWLAIDCGIGFSGNDTPEAEILVPDPSFI 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L + ITHAHEDH GA+ +W L PVY +PFA +L K R+ +P Sbjct: 60 VERKDKLAGLVITHAHEDHIGAVAHVWPMLQCPVYVTPFAAAVLRRKLAEARIM-DVPIH 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q G + DVG F IE V V HS+PE ++V+R+P G +VHTGDWK D D ++G TD D Sbjct: 119 VIQPGARFDVGPFDIEFVPVTHSVPEAQSMVLRTPSGIVVHTGDWKFDPDPLVGPATDLD 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG EG+LAL+CDSTN M+ G SE +++++ +++ + KG + VT F+S+V+R+ Sbjct: 179 RLAEIGREGVLALVCDSTNVMKPGPSRSESEVRRSMTELVASLKGRIAVTCFASNVARVE 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I A+ GR +VL+G SL+ + + A D G + FL+++ P +Q+++I TGS Sbjct: 239 TIAMAAQAAGRTVVLVGRSLRNLDTAARDCGYLSGVLPFLTEQDVNDVPDDQILLIITGS 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSAL++++ N+ L E DTVI+SSR IPGNE AI +++ L +GVRVI + Sbjct: 299 QGEPRSALSRIAMDTHPNIALGEGDTVIYSSRMIPGNERAIMAVQDNLSRRGVRVITDR- 357 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGH D+++MY+ ++PQ +V +HGE HL A LA + GIA V + +G + Sbjct: 358 EHFVHVSGHATGGDVQKMYELLKPQHVVPVHGEWRHLTAQAALAQEMGIAPV-LLEDGDI 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P +E++D G DG + +A RR++ F G + + +D + G Sbjct: 417 LRLSPGKLEVVDTAPTGRLALDGNRLLPMNGGVLAARRKMLFNGMVIGSFAVDEEGFVIG 476 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P++ G+ D D + + + + +P R D RE+ +ALR L + Sbjct: 477 EPKVSAPGLLDPD-DLESVR--VREEFANALDIIPDELRGDDVSFREAAKTALRRALGRK 533 Query: 542 WGKKPLVTVFINKI 555 K+PLV V + ++ Sbjct: 534 LQKRPLVDVHVLRV 547 >gi|83858398|ref|ZP_00951920.1| metallo-beta-lactamase family protein [Oceanicaulis alexandrii HTCC2633] gi|83853221|gb|EAP91073.1| metallo-beta-lactamase family protein [Oceanicaulis alexandrii HTCC2633] Length = 556 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 208/552 (37%), Positives = 328/552 (59%), Gaps = 3/552 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L F+PLGG GEIGMN+ LYG+G RKWI++DCGV+F PGVD++ PD FI+ Sbjct: 5 DNALYFVPLGGSGEIGMNLNLYGFGPEEDRKWIIVDCGVTFGDLTTPGVDIITPDPRFIV 64 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + L+ I +THAHEDH GA+ LW L P+YA+PF L+ + + + Sbjct: 65 ERKHQLLGIVLTHAHEDHMGAVAHLWRQLECPIYATPFTAWLMRDRLAEHGLLGEAELHE 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++G F ++ V + HSIPE L+IR+PVG ++HTGDWK+D + ++G+ TD + Sbjct: 125 IGLHSRFELGPFDMQLVTLTHSIPEPNGLIIRTPVGTVLHTGDWKIDPEPLIGNSTDVAA 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A G EG++A++CDSTN EG SE ++ N+ +++ +G V + F+S+V+R+ + Sbjct: 185 LEAAGEEGVMAMVCDSTNVFTEGESGSEADVRDNLIELVGQQEGRVAIAAFASNVARLET 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I E GR++ L+G S+ R+ A VG++ Q F+ +E G +P ++++++ TGSQ Sbjct: 245 AIRAGEANGRRVCLVGRSMHRMTQAAKAVGLLADCQPFIEEEEIGYFPPDKVLLLCTGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+AL++++ G RNV L + D+VIFSSR IPGNE I + NRL E+GV++I E E Sbjct: 305 GEPRAALSRIAEGSHRNVTLNKGDSVIFSSRIIPGNERGIFDLMNRLAERGVKIITERDE 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +HVSGHP ++L++MY W +P+ + +HGE HLV H +LA + RNG ++ Sbjct: 365 H-IHVSGHPCRDELRQMYAWAKPRTAIPVHGEYRHLVEHAQLARDLQVPNAIVPRNGSII 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 R+ D I+DE G DG + I +RR++++ GHL+V +L N+ Sbjct: 424 RITQDGASIVDEAPAGRMHVDGNFLVDADAESIKERRRMAYNGHLTVAAVL-ADGNLVSE 482 Query: 483 PEIVDIGIPA-YDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++ +G+ + Y+ D L + L + R+D + E+I +R ++ Sbjct: 483 IDVRAMGVASTYEYDLDDFLDDLAEAAEAAFKRLDRRDRRDPAAVEEAIRRGVRREASRI 542 Query: 542 WGKKPLVTVFIN 553 WGKKP V + Sbjct: 543 WGKKPHVEAIVL 554 >gi|293192231|ref|ZP_06609400.1| metallo-beta-lactamase family protein [Actinomyces odontolyticus F0309] gi|292820347|gb|EFF79340.1| metallo-beta-lactamase family protein [Actinomyces odontolyticus F0309] Length = 579 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 165/559 (29%), Positives = 292/559 (52%), Gaps = 15/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ L +PLGG+GE+G NM + Y K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 30 LEDGALRVIPLGGLGEVGRNMNVLEY----RGKLLVVDCGVLFPEETQPGVDLILPDFSW 85 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ + +TH HEDH GA+ L +P+Y S + + K R+ Sbjct: 86 IEDRMDDVVGLILTHGHEDHIGAVPYLLKLRGDIPIYGSDLTLAFVAPKLREHRL-PDPG 144 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 GD++ VG F +E V V HSIP+ +A+ +R+ GN++ TGD+K+D + +TD Sbjct: 145 LNVVAEGDRLTVGPFDLEFVSVTHSIPDALAVFVRTDAGNVLITGDFKMDQLPLDRRLTD 204 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA+ G E+ I + + A G ++V +F+S V R Sbjct: 205 LRAFARMGEEGVDLFMVDSTNALVPGFITPEREIGPVLDQVFGEATGQIVVASFASHVHR 264 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +I+ A GR++ +G S++R + +A + G + + + + + G P Q + +A Sbjct: 265 VQQVINAAAHHGRRVAFVGRSMERNMRIAEEKGYLSIPEGIIVDLKGIGELPPSQRVYMA 324 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++S G R V + D V+ +S IPGNE ++ + N L G RV++ Sbjct: 325 TGSQGEPMAALSRMSVGSHRTVTIEPGDMVVLASSLIPGNENSVYRVINDLTRLGARVVS 384 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 ++ VHVSGH +L Y ++P+ ++ IHGE HLV + +LA++ GI V Sbjct: 385 KE-NAKVHVSGHASAGELIYCYNIVQPKNVMPIHGEVRHLVGNGQLAVKTGIDPQKVVLA 443 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G + L + V DG IG+ ++ + RR L G +S+ +++ Sbjct: 444 EDGVTVDLKDGVARVSGIVPCEYVYVDGRSIGEISEDELETRRTLGSEGFISIFAVVERD 503 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI IG + + + +L V + D +D +L++++ + Sbjct: 504 SGMVLAGPEIRAIG----MAEDDSVFEEILPDVTQALKDAAAPGGQDPYVLQQAMRRVIG 559 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 560 RWVARRLRRRPMIVPVVTE 578 >gi|184156025|ref|YP_001844365.1| hypothetical protein LAF_1549 [Lactobacillus fermentum IFO 3956] gi|260662718|ref|ZP_05863612.1| beta-lactamase domain-containing protein [Lactobacillus fermentum 28-3-CHN] gi|183227369|dbj|BAG27885.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552799|gb|EEX25798.1| beta-lactamase domain-containing protein [Lactobacillus fermentum 28-3-CHN] gi|299783546|gb|ADJ41544.1| Beta-lactamase domain-containing protein [Lactobacillus fermentum CECT 5716] Length = 610 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 166/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + ++IDCGV FP+D+L GV+ V + + Sbjct: 6 IKNNEVAFFAVGGLGEIGKNMYCVQF----QDEIVIIDCGVLFPEDELLGVNYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + IFITH HEDH G L ++VP+YA PFA L++ K + + + Sbjct: 62 LVENKEKIKGIFITHGHEDHIGGLPFFLQKVNVPIYAGPFATSLIKGKLDEKHLLRSTEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 +V + R HSIP+T+ + + +P G I+ TGD+K D + + Sbjct: 122 HEIDEFSEVHFKKLWVSFFRTTHSIPDTVGVAVHTPQGTIIQTGDFKFDLTPVGNLPAPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+L L DSTNA R SE+ + +I + + KG ++ +F+S+V R Sbjct: 182 FQQMAKLGEEGVLLLTSDSTNAERPEFTKSERWVDIHIRRVFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A + GRKI + G S++ ++ +G +K + + YP E+++++ Sbjct: 242 LREASDAAMRQGRKIAIFGRSMENAIAAGQALGYLKIPEDSLIDPNELNSYPPEKVMIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGATVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQIDEELMLRLMKPKFFAPVHGEYRMQKIHTKLAQLTGVPKENTFIL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + G DG + D I +RR LS G ++ ++D Sbjct: 421 ENGDVLALTKDTCRLADHIESMGDVYIDGRDVSDSVGDPEIRERRMLSEEGVVTAVAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + +R D + + I Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKRVDRRAINRMIVLR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 541 LQRLLYDRTGRRPVIIPMVTILNAD 565 >gi|296453655|ref|YP_003660798.1| beta-lactamase domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|291517280|emb|CBK70896.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Bifidobacterium longum subsp. longum F8] gi|296183086|gb|ADG99967.1| beta-lactamase domain protein [Bifidobacterium longum subsp. longum JDM301] Length = 616 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 290/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 59 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 115 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 172 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 173 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 233 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 293 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 353 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 412 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 472 DGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 531 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 532 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 587 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 588 WVARQLHRKPMIVPVVADIAQD 609 >gi|227833338|ref|YP_002835045.1| hypothetical protein cauri_1514 [Corynebacterium aurimucosum ATCC 700975] gi|262184321|ref|ZP_06043742.1| hypothetical protein CaurA7_10048 [Corynebacterium aurimucosum ATCC 700975] gi|227454354|gb|ACP33107.1| hypothetical protein cauri_1514 [Corynebacterium aurimucosum ATCC 700975] Length = 689 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 179/557 (32%), Positives = 282/557 (50%), Gaps = 15/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L LGG+ EIG NM ++ Y ++IDCGV FP PGVDL+ PD I Sbjct: 122 QKDSLRIYALGGISEIGRNMTVFEY----QDDILIIDCGVLFPSSGEPGVDLILPDFGPI 177 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K Sbjct: 178 EKKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--F 235 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + V+ G F VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 236 VEVNEKSDVNYGPFRCRFWAVNHSVPDALGVMLGTPAGNIIHTGDIKLDQTPLDNRPTDL 295 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+EG+ ++CDSTNA G SE I ++ AK V++ +F+S+V R+ Sbjct: 296 PALSRYGDEGVDLMLCDSTNANIPGVSASEGDIPATFKRLVSGAKQRVIIASFASNVYRV 355 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 ++ ID A GRK+ G S+ R + +A +G +K + + ++++I T Sbjct: 356 QAAIDAAVAAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKVLLITT 415 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGEP +AL++++R E R + + + D +IFSS IPGNE A+ + N L + G VI Sbjct: 416 GTQGEPMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVFGVINMLSQIGAEVITN 475 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 E VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V + Sbjct: 476 K-EAKVHASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVARDRVVLAQ 534 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 535 NGVVVDLRNGRAEVVGQIPVGNLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVIDNRT 594 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G D I + + V T+ DL D + + + + Sbjct: 595 SRLLEHPTVSTTGFSDDDR---GIVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSK 651 Query: 537 LLKKVWGKKPLVTVFIN 553 L+ + ++P++ I Sbjct: 652 LMDSKYKREPVILPTIV 668 >gi|254417095|ref|ZP_05030841.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196176073|gb|EDX71091.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 597 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 185/581 (31%), Positives = 308/581 (53%), Gaps = 31/581 (5%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L +PLGG+ EIG N ++ + + + I++D G+ FP D++ GV++V PD+T++ Sbjct: 16 SSPALKIIPLGGLHEIGKNTCIFEF----NDEIILLDAGLGFPNDEMHGVNIVLPDMTYL 71 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G L +P ++ A+ LL+ K VS + Sbjct: 72 RENRHKIKGMIVTHGHEDHIGGLPYHLKQFDIPVIHGPRLAMALLKGKLEEAGVSDRTKL 131 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 S D V +G+ F +E +R HSI ++ + I +P+G +VHTGD+K+D + G+ D Sbjct: 132 NSVSPRDMVRIGSSFMVEYIRNTHSIADSFTVAIHTPIGVVVHTGDFKVDHTPVDGEYFD 191 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G SE + N+ I A G +LVTTF+SSV R Sbjct: 192 FQRLAEHGEKGVLCLLSDSTNAEVPGHTPSEASVYPNLDRIFSQAPGRILVTTFASSVHR 251 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I+D+A++ R + ++G S+ V++ A ++G IK D LF + P E+++++ Sbjct: 252 VQLILDLAQKQNRVVSVVGRSMLNVIAQARNLGYIKCPDSLFEPLHAANSLPPEKVLILT 311 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL ++S+GE R +K+ E DTV+FS+ IPGN +A+ + +RL+ QG VI Sbjct: 312 TGSQGEPLAALTRISKGEHRKLKIQEGDTVVFSANPIPGNTIAVVNTIDRLMMQGANVIY 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M RP+ + +HGE L+ H ++A + GI + Sbjct: 372 GRHQG-IHVSGHGAQEDHKLMLALTRPKFFMPVHGEHRMLIQHGKMAQKMGIPAENIVIT 430 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG M+ L D I ++ +V G+ L D I + +R+QL+ G ++V + Sbjct: 431 NNGDMVELTEDSISVVGQVPSGIELVDRSGI--VHHEVLKERQQLAGDGVVTVAAAVSWE 488 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV----------DLPQFRRKDLKLL 526 + PEI G+ A + + +L++K + T+ D + D L Sbjct: 489 GKLLAQPEIHLRGVVASV-EKSLLQQLVIKRIERTLSEQWTDFAKSLDGKKQPEVDWTGL 547 Query: 527 RESISSALRSLLKKVWGKKPLVT--------VFINKISRQR 559 ++ I L L ++ +PLV + ++ R+R Sbjct: 548 QQKIEGDLERLTRRELQSRPLVVFLLQNPEEPQVKRVGRRR 588 >gi|260574780|ref|ZP_05842783.1| beta-lactamase domain protein [Rhodobacter sp. SW2] gi|259023197|gb|EEW26490.1| beta-lactamase domain protein [Rhodobacter sp. SW2] Length = 558 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 204/557 (36%), Positives = 307/557 (55%), Gaps = 4/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M L+FLPLGG GEIGMN +YGYG + I++D G++FP D PGVD++ PD+ Sbjct: 1 MATNRLIFLPLGGAGEIGMNCYVYGYGPEDKERLIVVDLGITFPDMDSTPGVDVIMPDLA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ R + AIFITHAHEDH GAL LW L +YA F + K + Sbjct: 61 WLTARRDRIEAIFITHAHEDHIGALAHLWPQLKSKIYARRFTATIGRMKLEEAGHPVEAI 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V G F ++ V V HSIPE+ AL+I +P G IVH+GD+KLD I+G+ Sbjct: 121 TVVEPRPAVVTAGPFKVQFVPVAHSIPESAALIIDTPAGRIVHSGDFKLDATPIVGEPWS 180 Query: 180 KDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 ++ AI E + ALMCDSTN SE I++ I D++K A+G V+ TTF+S+V+ Sbjct: 181 PEAFAAIAAERPVKALMCDSTNVFSANPGRSEASIREPIRDLIKGARGMVVATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + A R + LLG +++R+V A D G++ + E PR L++I Sbjct: 241 RLKTLAEAARAADRSVCLLGRAMQRMVKAAQDSGVLTDFPPLIPPEQAVDVPRGNLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQLSRG+ +++ E DT +FSS+ IPGNE + I N E GV V+ Sbjct: 301 TGSQGERRAATAQLSRGKYLGLEMKEGDTFLFSSKTIPGNERGVISIMNAFSEMGVDVV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +D HVSGH D++ +++ ++P++L+ +HGE HL H LA GIA N Sbjct: 360 DDPSGKYHVSGHANRPDMQTLHRILKPEMLLPMHGEHRHLREHCRLAEAGGIAS-EVATN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G M+ L D E+ + + G DG ++ D + R +++ GH + VLLD Sbjct: 419 GMMIDLTGDEPEVAEYIETGRIYLDGSVLIGARDGVVRDRIRMALNGHALITVLLDESNA 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G + +G+P GG + + + + + + P +D + L E+I R + Sbjct: 479 ALGDAWVELMGLPQTGKRGGSLAEAIEEELGEFLAGAPAKVMRDDEKLDEAIRRIARQVA 538 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV ++++ Sbjct: 539 MEEIGKKPEVTVVVSRL 555 >gi|254294086|ref|YP_003060109.1| beta-lactamase [Hirschia baltica ATCC 49814] gi|254042617|gb|ACT59412.1| beta-lactamase domain protein [Hirschia baltica ATCC 49814] Length = 554 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 208/556 (37%), Positives = 328/556 (58%), Gaps = 3/556 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +EL+FLP+GG EIGMN+ Y GS ++RKW+++D GV+F + PG+DL+ PD F Sbjct: 1 MTQDELLFLPVGGCREIGMNLNAYAIGSGANRKWLIVDVGVTFGGPETPGIDLIMPDTEF 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + R+ ++ I +THAHEDH GA+ LW L P+YA+PF L++ K +++ K++P Sbjct: 61 LETIREQIVGIVLTHAHEDHIGAIAHLWPRLRAPLYATPFTAYLIKEKLREKQLDKEVPL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 GDK +G F IE V + HSIPE +VIR+P G I HTGDWK+D + +LG D+ Sbjct: 121 NIVPLGDKRSIGPFDIEYVTLTHSIPEPNGVVIRTPAGVIFHTGDWKIDPNPMLGKGFDE 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + + +G EGILA++CDSTN EG SE+ +++N+ ++ G V +TTF+S+V+R+ Sbjct: 181 ERIKELGEEGILAIVCDSTNVFEEGESGSEETVRENLIKVVGEQTGKVAITTFASNVARL 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 S A + R + L+G S+ R+ A +VG++K F+ E ++ + TG Sbjct: 241 ESCCIAAMENERSVCLVGRSMFRITDAAKEVGLLKDVH-FVEASDAQHLAPENVLYLCTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+AL++++ G +VK+ E DTV+FSSR IPGNE I ++N L E GV++I + Sbjct: 300 SQGEPRAALSKIATGSHPSVKMGEGDTVMFSSRVIPGNERGIFDLQNALAENGVKIITDR 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E +HVSGHP ++L+RMY W +P++ V +HGE H++ H AL + NG Sbjct: 360 QEH-IHVSGHPCRDELRRMYSWAKPKISVPVHGERRHIIEHARYALSMQVPEAITPNNGD 418 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P P ++DEV G DG + G+ +RR++S+ GHLSV++ +D I Sbjct: 419 LICLAPGPARVVDEVPTGRLFLDGNRLTPEHSGGMQERRRMSWSGHLSVSIAIDEKGVIK 478 Query: 481 GVPEIVDIGIPAYD-GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P + G D + L + T + + + D + ++ ++R + Sbjct: 479 DGPYVTARGFSELDGRVVDESLDQLDEAAETAMDKVSRKDIDDDDKVERALLRSVRKSAE 538 Query: 540 KVWGKKPLVTVFINKI 555 ++GK+PLV + I ++ Sbjct: 539 GLFGKRPLVDISILRV 554 >gi|163868358|ref|YP_001609567.1| hypothetical protein Btr_1202 [Bartonella tribocorum CIP 105476] gi|161018014|emb|CAK01572.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 558 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 260/550 (47%), Positives = 387/550 (70%), Gaps = 1/550 (0%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E VFLPLGGVGEIGMN+A YG+GS + R+W+++D GVSF +LPGVDL+ PDI F+ E Sbjct: 8 EFVFLPLGGVGEIGMNLAAYGFGSQNLREWLLVDMGVSFAGSELPGVDLILPDIRFLESE 67 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + N+ + +THAHEDHYGA+ DLW L VP+Y + F GLLE+KR + S+K+ FQ Sbjct: 68 KHNIRGLVLTHAHEDHYGAVLDLWPKLQVPLYCTAFTAGLLESKRQSDFESRKMSFNIFQ 127 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 AG+ VG F+IE++ VNHSIPE+++L I + +G +VHTGDWK+D LG VTD+ Sbjct: 128 AGNCFQVGPFAIEAIAVNHSIPESVSLAITTSLGTVVHTGDWKIDHTPSLGAVTDEKRFR 187 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 A+GN+G+LAL+CDSTNA R+G SE+ ++ ++ +I+ A+G V + TF+S++ RIRSI Sbjct: 188 ALGNKGVLALLCDSTNACRDGISPSEQQVQTSLSEIISKAEGRVAIATFASNIGRIRSIA 247 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 AE GRK++++G SLKR + +A ++G + F++++ +G PR++L++I TGSQGE Sbjct: 248 LAAEAAGRKVLIIGRSLKRSIMIAQELGYMDGLAPFVTEDDYGYIPRKELVLIVTGSQGE 307 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +ALA+LSR MRN+ L+ DTVI+SSR+IPGNE AI ++NR ++ G+ VI + + Sbjct: 308 PCAALAKLSREGMRNIALSTGDTVIYSSRSIPGNEKAIIEVQNRFIDLGIEVITNE-DAL 366 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 VHVSGHP ++L +MY WI+P +LV +HGE +HL A LA Q GI V +RNG MLRL Sbjct: 367 VHVSGHPRRSELLQMYDWIKPHILVPVHGEAIHLTAQAALARQAGIKVVRDIRNGNMLRL 426 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPE 484 P P+E+ID+V KDG L+G +LGI +RR+LS+ GH++V++ +++ + + Sbjct: 427 APAPVEVIDQVPVVRIYKDGCLLGDEYELGIRERRKLSYAGHVAVSLHMNSKHELLDDIG 486 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 + G+P +G G + +LL TV TV ++P +RK+ +L++E+ A+R+ + ++W K Sbjct: 487 LSMFGLPESNGKGESLKDILLDTVENTVYNIPHMKRKNNELIQEATRRAVRAAVDEIWQK 546 Query: 545 KPLVTVFINK 554 KPL TVF+++ Sbjct: 547 KPLCTVFLHR 556 >gi|304391417|ref|ZP_07373359.1| ribonuclease J [Ahrensia sp. R2A130] gi|303295646|gb|EFL90004.1| ribonuclease J [Ahrensia sp. R2A130] Length = 558 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 267/554 (48%), Positives = 370/554 (66%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++L+FLPLGGVGEIGMN ALYGYG R++I++D GV+FP DD PG DLV PDI++I Sbjct: 6 KTDDLIFLPLGGVGEIGMNFALYGYGKGKDRRFIIVDVGVTFPGDDFPGADLVLPDISYI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + L I ITHAHEDHYGAL LW L V+ +PF G+LEAK ER + KI Sbjct: 66 TQRLDKLDGIIITHAHEDHYGALLALWPMLKTKVWCTPFTAGMLEAKIEGERNAPKIKIE 125 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+AG+ VG F IE + V HSIPE ++L+IRSP+GNI+HTGDWKLD LG TD+ Sbjct: 126 VFKAGEPFKVGPFEIEGIHVTHSIPEPVSLMIRSPLGNIIHTGDWKLDHAPTLGQKTDEA 185 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G EG+LAL+CDSTNAM EGT SE+ + +++ +++ N+ G VLVTTFSS+V RIR Sbjct: 186 HFRRMGEEGVLALICDSTNAMVEGTSPSEESVSESLANVITNSTGRVLVTTFSSNVGRIR 245 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE+ GRK+++LG SL RV V+ D+G + FL+++ +G R +L+VI TGS Sbjct: 246 SIAMAAEKAGRKVMILGRSLLRVCDVSRDLGYLDGIAPFLTEDEYGSIARNKLVVICTGS 305 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL ++SRGE RN LA D VIFSSR+IPGNE I I+N LVEQGV ++ + Sbjct: 306 QGEQRAALGKMSRGEHRNATLAAGDKVIFSSRSIPGNERGINDIQNALVEQGVEIVLDG- 364 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP ++L +MY+W +P + V +HGE HL AH +L ++GI+ V PVRNG M Sbjct: 365 ETLVHVSGHPRRSELVQMYEWTKPTIGVPVHGEARHLAAHAKLMGEQGISDVAPVRNGDM 424 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LRL P P E+ID V G KDG L+G +GIA+RR LS+VG++ + +++D+ ++ Sbjct: 425 LRLAPGPAEVIDNVTAGRIYKDGNLVGTEDQMGIARRRVLSWVGNVVIAMVIDSRGDLLA 484 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE+V G+P ++ + + +R+D + +++ A+R+ ++ Sbjct: 485 DPEVVCEGLPRTVDGNDSFEDIIYDAALEAFEAMTAKQRRDQNRITQTVERAVRAEIRDF 544 Query: 542 WGKKPLVTVFINKI 555 WGKKPL+T + ++ Sbjct: 545 WGKKPLITALVTRV 558 >gi|46191137|ref|ZP_00120594.2| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bifidobacterium longum DJO10A] gi|189439813|ref|YP_001954894.1| putative metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum DJO10A] gi|317482566|ref|ZP_07941581.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp. 12_1_47BFAA] gi|322688625|ref|YP_004208359.1| hypothetical protein BLIF_0437 [Bifidobacterium longum subsp. infantis 157F] gi|189428248|gb|ACD98396.1| Putative metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum DJO10A] gi|316915988|gb|EFV37395.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp. 12_1_47BFAA] gi|320459961|dbj|BAJ70581.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 616 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 290/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 59 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 115 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 172 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 173 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 233 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 293 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 353 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 412 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 472 DGDVVDLYHGRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 531 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 532 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 587 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 588 WVARQLHRKPMIVPVVADIAQD 609 >gi|322690611|ref|YP_004220181.1| hypothetical protein BLLJ_0420 [Bifidobacterium longum subsp. longum JCM 1217] gi|320455467|dbj|BAJ66089.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 616 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 290/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 59 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 115 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 172 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 173 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 233 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 293 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 353 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 412 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 472 DGDVVDLYHGRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 531 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 532 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 587 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 588 WVARQLHRKPMIVPVVADIAQD 609 >gi|289450617|ref|YP_003475592.1| putative ribonuclease J 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185164|gb|ADC91589.1| putative ribonuclease J 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 817 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 188/560 (33%), Positives = 293/560 (52%), Gaps = 12/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L +PL G+ E+G NM + YG I+IDCGVSFP D PG+D + P++ ++ Sbjct: 264 KVKALRVIPLSGLCEVGRNMTVLEYG----NDMIIIDCGVSFPDDSHPGIDSIIPNMEYV 319 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 K L +FITH HEDH GAL L + PVYA+P I L+ K + K Sbjct: 320 FKNVHKLRGVFITHGHEDHIGALSWLMEKIDAPVYATPLPIELIRYKLEDRGIKGKDKLL 379 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + GD + G S+E + VNHSI + AL IR+P+G ++HTGD+K+D I G V D Sbjct: 380 RTVHDGDVIKAGCLSVEYIHVNHSIADACALAIRTPIGTVIHTGDFKIDYTPINGGVIDL 439 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +IG+EG+L L+C+STN R G SEK + + I A G V+V TFSS+V RI Sbjct: 440 PRLASIGSEGVLLLLCESTNIERAGFSPSEKVVGETFAGIFAEATGRVIVATFSSNVYRI 499 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 + IID AE+ RK+ L+G S++ V A +G I ++ + + Y E+L++I T Sbjct: 500 QQIIDAAERHNRKVALIGRSMQNVFRAADSLGYIKRRADTIIDLANVDNYAPEELVIITT 559 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ E R V++ DT+I S+ IPGNE I + N L ++G +VI Sbjct: 560 GSQGEPLAALTRMAFDEHRKVEINPSDTIIISATPIPGNEKPIYRVINELYKKGAKVIYS 619 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +HVSGH Y ++K +++ +RP+ + +HGE L H ELA + G + + Sbjct: 620 SL-AHIHVSGHAYREEIKLIHELLRPKYFIPVHGEYRMLHLHAELAHEIGQPWDTIFILN 678 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG + ++ + +I+ L DG + + R+ L+ G + +++ ++ Sbjct: 679 NGDICQITENDAKIVGSFNAEPVLIDGKSATTLDNNVLESRKILAEEGIIVISLCVNKAT 738 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRE-SISSALR 535 + P I G Y D I + + + + +LR L Sbjct: 739 QTLAAAPAIQTRGF-VYQSDLSDIESETTALIHRYIKKVVNNNKPLADMLRSHQFRDQLY 797 Query: 536 SLLKKVWGKKPLVTVFINKI 555 SL + ++P+V V + ++ Sbjct: 798 SLFYEKTSRRPIVLVSVLEV 817 >gi|227515446|ref|ZP_03945495.1| metallo-beta-lactamase [Lactobacillus fermentum ATCC 14931] gi|227086205|gb|EEI21517.1| metallo-beta-lactamase [Lactobacillus fermentum ATCC 14931] Length = 628 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 166/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + ++IDCGV FP+D+L GV+ V + + Sbjct: 24 IKNNEVAFFAVGGLGEIGKNMYCVQF----QDEIVIIDCGVLFPEDELLGVNYVIQNYDY 79 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ + IFITH HEDH G L ++VP+YA PFA L++ K + + + Sbjct: 80 LVENKEKIKGIFITHGHEDHIGGLPFFLQKVNVPIYAGPFATSLIKGKLDEKHLLRSTEL 139 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 +V + R HSIP+T+ + + +P G I+ TGD+K D + + Sbjct: 140 HEIDEFSEVHFKKLWVSFFRTTHSIPDTVGVAVHTPQGTIIQTGDFKFDLTPVGNLPAPN 199 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+L L DSTNA R SE+ + +I + + KG ++ +F+S+V R Sbjct: 200 FQQMAKLGEEGVLLLTSDSTNAERPEFTKSERWVDIHIRRVFERIKGRIIFASFASNVYR 259 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A + GRKI + G S++ ++ +G +K + + YP E+++++ Sbjct: 260 LREASDAAMRQGRKIAIFGRSMENAIAAGQALGYLKIPEDSLIDPNELNSYPPEKVMIMC 319 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 320 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGATVIH 379 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 380 GYVN-NIHTSGHGGQIDEELMLRLMKPKFFAPVHGEYRMQKIHTKLAQLTGVPKENTFIL 438 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + G DG + D I +RR LS G ++ ++D Sbjct: 439 ENGDVLALTKDTCRLADHIESMGDVYIDGRDVSDSVGDPEIRERRMLSEEGVVTAVAVVD 498 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + +R D + + I Sbjct: 499 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKRVDRRAINRMIVLR 558 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 559 LQRLLYDRTGRRPVIIPMVTILNAD 583 >gi|312133218|ref|YP_004000557.1| metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|311772419|gb|ADQ01907.1| Putative metallo-Beta-lactamase superfamily hydrolase [Bifidobacterium longum subsp. longum BBMN68] Length = 616 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 169/561 (30%), Positives = 290/561 (51%), Gaps = 16/561 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 59 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 114 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 115 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 172 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 173 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 233 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 293 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 353 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 412 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 472 DGDVVDLYHGRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 531 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 532 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 587 Query: 537 LLKKVWGKKPLVTVFINKISR 557 + + +KP++ + I++ Sbjct: 588 WVARQLHRKPMIVPVVADIAQ 608 >gi|261337682|ref|ZP_05965566.1| metallo-beta-lactamase family protein [Bifidobacterium gallicum DSM 20093] gi|270277121|gb|EFA22975.1| metallo-beta-lactamase family protein [Bifidobacterium gallicum DSM 20093] Length = 644 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 292/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 85 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFNYI 140 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R+ Sbjct: 141 KDRLDQVDALVLTHGHEDHIGGVPYLLKLRKDIPLIGSKLTLAFVEAKCKEHRIEP--IM 198 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 DK+ VG F++E V V HSIP+ +A+ +R+P G+++ TGD KLD + +TD Sbjct: 199 HEVTGRDKMKVGPFNMEFVNVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRITDL 258 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 259 VEFGKLGEQGVDLLMMDSTNAEVPGFVKPETSIGPALDMAFAQATRKIIVASFSSHVHRV 318 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + YP +L+ + T Sbjct: 319 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHLPEDTVIDLKQAKDYPDNKLVYMCT 378 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV++G RV+ Sbjct: 379 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQKGARVV-N 437 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ GI V Sbjct: 438 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGIEPQNVVLAE 497 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ I+ V G DG +G+ D + KRR L G +S V++D Sbjct: 498 DGDVIDLYHGQAAIVGSVPCGYVYVDGDSVGELTDDELEKRRILGSEGFVSCFVVVDTEA 557 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P++ + + + + + VI + D KD L++ + L S Sbjct: 558 CEVLAGPKVYLNAVAEDESE----FEQVRHKVIQQLEDAMMQGTKDTYKLQQIMRRTLGS 613 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + ++ Sbjct: 614 WVARELHRKPMIVPVVADVATD 635 >gi|242309136|ref|ZP_04808291.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524177|gb|EEQ64043.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 658 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 293/556 (52%), Gaps = 11/556 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ++ P+GG+GEIG NM + + I+ID G+SFP D+ G+D++ PD +++ Sbjct: 107 NGKVRITPIGGLGEIGGNMTVIE----TQNSAIIIDAGMSFPDGDMHGIDILVPDFSYLE 162 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + + I ITHAHEDH GA+ L+ P+Y +P +GL+ +K + K + Sbjct: 163 VIKDKIAGIVITHAHEDHIGAMPYLFKKYQFPIYGTPLPLGLIGSKFDEHGLKKYRSLFR 222 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + +G F IE + + HSI ++ AL I++ G I HTGD+K+D I G TD + Sbjct: 223 AVEKRKPIRIGEFEIEWIHITHSIVDSSALAIKTEAGVIFHTGDFKIDHTPIDGYPTDLN 282 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G +G+L L+ DSTN+ + G SE + + AKG V+++TFSS++ R+ Sbjct: 283 RIAYYGEQGVLLLLSDSTNSHKAGYTPSEASVGPAFDMLFSRAKGRVIMSTFSSNIHRVY 342 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + GRKI ++G S+++ + +A +G I +F+ Y E+++++ TG Sbjct: 343 QAIQYGLKYGRKISVIGRSMEKNLEIARTLGYIDLPQNIFIEAHEVAKYADEEVLIVTTG 402 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ D VI S++AIPGNE ++ +I N + + G +V +D Sbjct: 403 SQGETMSALYRMATDEHRHIKIKPSDIVILSAKAIPGNEGSVSNILNFINKAGAKVYYQD 462 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE H++ HKE A+ G+ + + + Sbjct: 463 F-SEIHTSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHILKHKETAISCGVDEKNIYLMED 521 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + + + + V G D + A+ + R+ L+ G + V V +D N Sbjct: 522 GDQIEIAHNYLRKVRSVKTGKIYIDNQINAFVANDVVLDRQNLAENGIVIVVVQIDKAKN 581 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P I +GI A + D +K + + V + + K + I +ALR L Sbjct: 582 AVIGKPRIQTMGIIA-NKDILSFNKEIEEFFSLFVKNCKKELYSSQKAMENEIRNALRKL 640 Query: 538 LKKVWGKKPLVTVFIN 553 + K + P + + Sbjct: 641 MFKKTKRYPTIVPNVI 656 >gi|317490518|ref|ZP_07948996.1| metallo-beta-lactamase superfamily protein [Eggerthella sp. 1_3_56FAA] gi|316910369|gb|EFV32000.1| metallo-beta-lactamase superfamily protein [Eggerthella sp. 1_3_56FAA] Length = 641 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 284/559 (50%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ IG NM ++ I+ D G+ FP D+ PGVDL+ PD T+++ Sbjct: 92 NATLKIIPLGGLDAIGKNMTVFE----CKGDMILDDAGLMFPDDNHPGVDLILPDYTYVL 147 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L I ITH HEDH G L L L +VP+Y + +GL+E K ++ K Sbjct: 148 ENADKLRGIVITHGHEDHTGTLPYLMKDLDRNVPIYGTKMTLGLIEGKFAEHKI-KNAKL 206 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + GD++ +G F+ E VNHSIP + + +SP GN++HTGD+KLD I G TD Sbjct: 207 VEIKPGDQIKLGCFTAEFFAVNHSIPGAVGVFFQSPAGNVLHTGDFKLDQTPIDGVTTDF 266 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+ +M DSTNA SE + K + I+ AKG V++ +F+S + R+ Sbjct: 267 GALSKFSEIGVDLMMSDSTNAQNPNFTPSEAEVGKELAKIISQAKGRVIIASFASHIHRM 326 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + I D A GRK+V+ G S+ + +A +G + D + P EQ++++ T Sbjct: 327 QQICDAAVANGRKVVVTGRSMIQNTDIARRLGYLSISDTDLIDAYDLKGIPPEQVVIMCT 386 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ GE R +++ E DTVI S+ +PGNE A+ + N L + G V + Sbjct: 387 GSQGEPLSALARIANGEHRTIQMDEGDTVIVSATPVPGNEKAVTRVINGLAKIGADV-YD 445 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +LK + ++P+ + +HGE HL AH LA G+ V Sbjct: 446 KNRARVHVSGHAGAEELKLVLSIVQPKAFMPVHGEATHLRAHARLAEATGVPTDNVFICE 505 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG+ L L + + V G+ DG +G + + +R L G ++ + Sbjct: 506 NGESLELTSQGVVRGETVQSGIVFVDGLSVGDTSQGVLDERNALGSQGFAAIAAAVSPKG 565 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G +I GI GD + + TV + K +++ AL S Sbjct: 566 KNVVGNVQIEMHGI--TGGDDDFLVREAQGTVKNALGRAMGKGDGQ-KEWKKAGRDALLS 622 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + +P+V V + ++ Sbjct: 623 LLWERTKTRPMVIVNLLEV 641 >gi|294102450|ref|YP_003554308.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] gi|293617430|gb|ADE57584.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] Length = 575 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 173/563 (30%), Positives = 304/563 (53%), Gaps = 12/563 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ +L LGG+GEIG NM ++ YG +++D G+ FP +++ G+D V PDI+++ Sbjct: 16 KSVQLKVFALGGLGEIGKNMYVFQYG----DDILVVDAGLMFPDEEMLGIDFVIPDISYL 71 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R+ + I ITH HEDH GAL + L+VPVY + +G++ K + Sbjct: 72 EENREKIKGIIITHGHEDHIGALPFVLPRLNVPVYGTRLTLGMVRHKLQEAVPDYNANFV 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +AG++ +G+F+++ V V HSIP+ + LVI++P G IVHTGD+KLD I G +TD Sbjct: 132 EVKAGEEAGLGSFNVQFVSVCHSIPDGVGLVIQTPQGCIVHTGDFKLDPTPIDGRLTDYA 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 + G +G+L ++ DSTNA ++G SE I + I + + +++ F+S++ R+ Sbjct: 192 AFAEAGKKGVLLMLSDSTNAEKKGFTSSEFIIGGTLDRIFRLHRNKRIIIAAFASNLHRV 251 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + RK+ +G S+ V++A ++G + D++ + Y Q++V+ T Sbjct: 252 QQVVDAASRFNRKVAFVGRSMINYVALARELGYLSADDKMIIPAADVYKYAPNQVVVMTT 311 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP S L +S+GE + ++L+ +D V + +PGNE + NRL G VI E Sbjct: 312 GSQGEPFSGLVLMSKGEHKQIELSARDVVAIFASPVPGNEKLVSSTINRLFACGCEVIYE 371 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + +HVSGH ++L+ M +RP+ V IHGE HLV H ++A + GI ++ Sbjct: 372 G-DKEIHVSGHAARDELRLMINLVRPKYFVPIHGEYRHLVRHTQIAQEMGISPKNTFVLQ 430 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG +L + ++ + V G + DG +G+ + +R +L+ G + V+ ++D + Sbjct: 431 NGDVLAISGTRAQVREHVAAGRIMVDGVAMGELEGSIMKERHELAEDGFIVVSAVVDKYL 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRE--SISSALR 535 N+ +P I G + D +H+ LL + + +R K + E S Sbjct: 491 NLLSIPYIESRGF-IHIEDASSLHEDLLAAIKRVFEHFAKRKRAVEKDVLELRVKSRVRD 549 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 + ++ +P++ I + + Sbjct: 550 VVRRRYVHARPMILPIITMVEER 572 >gi|241890148|ref|ZP_04777446.1| ribonuclease J 1 [Gemella haemolysans ATCC 10379] gi|241863770|gb|EER68154.1| ribonuclease J 1 [Gemella haemolysans ATCC 10379] Length = 556 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 165/559 (29%), Positives = 285/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + ++ID GV FP D++ G+D V PD ++ Sbjct: 5 IKKNEVGVAAIGGLGEIGKNTYAIQY----RDEIVIIDAGVKFPGDNILGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K + A+ ITH HEDH G L L +++P+Y P AIGL+ +K + K Sbjct: 61 IEKNVDKIKALIITHGHEDHIGGLPFLLRKVNLPIYGGPLAIGLIRSKLEEHNLLAKAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + HSIP++ +++ +P GNIVHTGD+K D + ++ Sbjct: 121 NVIDEDTVLNFKYLKVSFHNTTHSIPDSFGVIVNTPQGNIVHTGDFKFDFTPVG-QGSNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + AIG +G+L L+ DSTN+ R SEK + K I +I++ K V+ TF+S+V R+ Sbjct: 180 HKMAAIGEQGVLCLLSDSTNSERTEFTQSEKEVGKTISNILRKEKHRVIFATFASNVYRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + GRKIV+ G S+++ + + ++G IK + F++ + +L+++ T Sbjct: 240 KQVVEACIEHGRKIVVFGRSMEKAIKIGTELGYIKAPKETFVNSKYLDQVDPNKLLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGE +AL++++ G + + + DTVIF+S AIPGN ++I + L + G VI Sbjct: 300 GTQGEELAALSRIANGTHKKITIMPTDTVIFASSAIPGNTLSINKNIDLLSKLGANVITS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M++ I+P+ + IHGE V H + A + I + Sbjct: 360 SVN-NVHTSGHGSKEEQKLMFRLIKPKYFMPIHGEYRMQVIHAQTAAECDIPLENSFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG++L L D I + DG IG + I R++LS G + V++ +D + Sbjct: 419 NGEVLALTSDSARIAGKFDASDVYVDGLGIGDIGSVVIKDRKELSEEGVIVVSIAIDFKN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G + ++ + V+ + + +R I AL Sbjct: 479 KRLMNNPDVISRGF-VNVNESTELFAQSKVIIKDAVIAALENEECGVYQIRLQILEALGE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L+ G+KP++ I ++ Sbjct: 538 FLESEIGRKPVILPTILEV 556 >gi|295105859|emb|CBL03402.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Gordonibacter pamelaeae 7-10-1-b] Length = 633 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 286/559 (51%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ IG NM ++ I+ D G+ FP DD PG+DL+ PD T+++ Sbjct: 84 NATLKIIPLGGLDAIGKNMTVFE----CKGDMILDDAGLMFPDDDHPGIDLILPDYTYVL 139 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L I ITH HEDH G L L L +P+Y + +GL+E K ++ K Sbjct: 140 ENADKLRGIIITHGHEDHTGTLPYLMKDLDRQIPIYGTKMTLGLIEGKFAEHKI-KNAKL 198 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + GD+V +G F+ E VNHSIP + + +SP GN++HTGD+KLD I G TD Sbjct: 199 IEIKPGDQVKLGCFTAEFFAVNHSIPGAVGVFFQSPAGNVLHTGDFKLDQTPIDGVTTDF 258 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+ +M DSTNA SE + K + I+ A+G V++ +F+S + R+ Sbjct: 259 GALAKFSKTGVDLMMSDSTNAQNPNFTPSEAEVGKELRKIISQARGRVIIASFASHIHRM 318 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I D A GRK+V+ G S+ + +A +G + D+ + P EQ++++ T Sbjct: 319 QQICDAARDNGRKVVVTGRSMIQNTDIARRLGYLNIPDEDIVDAYDLKGIPPEQVVIMCT 378 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ GE + + L + DTVI S+ +PGNE A+ + N L + G V + Sbjct: 379 GSQGEPLSALARIANGEHKTIDLEQGDTVIISATPVPGNEKAVTRVINSLAKIGADV-YD 437 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +LK + ++P + +HGE HL AH +LA G+ V Sbjct: 438 KKRAMVHVSGHAGAEELKLVLSIVQPNAFMPVHGEATHLRAHAKLAEATGVPAENVFICE 497 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNH 476 NG+ L L ++ + V G+ DG +G + + +R L G SV + Sbjct: 498 NGEGLELSSRGVKRGETVQSGIVFVDGLSVGDTSQDVLDERNALGSQGFASVAAAISSKR 557 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ G ++ GI GD + + TV + K L+++ AL S Sbjct: 558 KDVVGEVQVEMHGI--TGGDDDYLVREARSTVKNALKRQLGKGGGQ-KELKKAARDALLS 614 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + ++P+ V + ++ Sbjct: 615 LLWERTKQRPMAIVNLLEV 633 >gi|291456206|ref|ZP_06595596.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM 20213] gi|291381483|gb|EFE89001.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM 20213] Length = 618 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 288/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 61 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 116 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK R + Sbjct: 117 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHRQNP--TK 174 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + DK+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 175 VEVSGRDKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 234 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 235 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 294 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 295 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKKANDIQDDKLVYMCT 354 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 355 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 413 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 414 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 473 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 474 DGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 533 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + + + D +D L++ + L Sbjct: 534 HEVVTGPKIYLNAVAEDESE----FDKVRHQIAEQLNDAMMQGTRDTYKLQQIMRRTLGG 589 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 590 WVARQLHRKPMIVPVVADIAQD 611 >gi|259500702|ref|ZP_05743604.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|302191392|ref|ZP_07267646.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus iners AB-1] gi|309803975|ref|ZP_07698058.1| ribonuclease J 1 [Lactobacillus iners LactinV 11V1-d] gi|309805323|ref|ZP_07699373.1| ribonuclease J 1 [Lactobacillus iners LactinV 09V1-c] gi|309809276|ref|ZP_07703145.1| ribonuclease J 1 [Lactobacillus iners SPIN 2503V10-D] gi|312871437|ref|ZP_07731532.1| ribonuclease J 1 [Lactobacillus iners LEAF 3008A-a] gi|312872379|ref|ZP_07732449.1| ribonuclease J 1 [Lactobacillus iners LEAF 2062A-h1] gi|312873962|ref|ZP_07733998.1| ribonuclease J 1 [Lactobacillus iners LEAF 2052A-d] gi|312875490|ref|ZP_07735493.1| ribonuclease J 1 [Lactobacillus iners LEAF 2053A-b] gi|315653463|ref|ZP_07906384.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|325911480|ref|ZP_08173891.1| ribonuclease J 1 [Lactobacillus iners UPII 143-D] gi|325912840|ref|ZP_08175218.1| ribonuclease J 1 [Lactobacillus iners UPII 60-B] gi|329921347|ref|ZP_08277785.1| ribonuclease J 1 [Lactobacillus iners SPIN 1401G] gi|259168086|gb|EEW52581.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|308163977|gb|EFO66241.1| ribonuclease J 1 [Lactobacillus iners LactinV 11V1-d] gi|308165323|gb|EFO67556.1| ribonuclease J 1 [Lactobacillus iners LactinV 09V1-c] gi|308170389|gb|EFO72413.1| ribonuclease J 1 [Lactobacillus iners SPIN 2503V10-D] gi|311089001|gb|EFQ47442.1| ribonuclease J 1 [Lactobacillus iners LEAF 2053A-b] gi|311090511|gb|EFQ48919.1| ribonuclease J 1 [Lactobacillus iners LEAF 2052A-d] gi|311092202|gb|EFQ50576.1| ribonuclease J 1 [Lactobacillus iners LEAF 2062A-h1] gi|311093090|gb|EFQ51439.1| ribonuclease J 1 [Lactobacillus iners LEAF 3008A-a] gi|315489154|gb|EFU78795.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|325476680|gb|EGC79835.1| ribonuclease J 1 [Lactobacillus iners UPII 143-D] gi|325477833|gb|EGC80967.1| ribonuclease J 1 [Lactobacillus iners UPII 60-B] gi|328934639|gb|EGG31143.1| ribonuclease J 1 [Lactobacillus iners SPIN 1401G] Length = 559 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 159/561 (28%), Positives = 281/561 (50%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+E+ +GG+GEIG NM Y + I++DCG+ FP+D G++ + D ++ Sbjct: 3 LKNDEVGIFAIGGLGEIGRNMYCVQY----QDEIIIMDCGIKFPEDGEMGINYIISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K R+ + A+ +TH HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNREKIKALVVTHGHEDHIGGIPFLLKKIPEIPVYATPFALALIRGKLDEHGILKNSV 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSIP+T+ + + +P G ++ TGD+K D ++ Sbjct: 119 LHEEYEDTVLQFSKLSVTFFRTTHSIPDTLGIAVHTPQGTVIFTGDFKFDLTPVMDQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + K++++I+ KG ++ TF+S++ Sbjct: 179 DFQKMAKLGEEGVLALLSDSTNAEVATFTKSERFVAKSLHNIITGIKGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + I A GRK+ + G S++ + ID+G + + + P E+ +++ Sbjct: 239 RVSTAIKAAVATGRKVAIFGRSMENGIQNGIDLGYLDIPEGTIVEASEINKLPPEKAMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN ++ H+ N+L E G V+ Sbjct: 299 CTGSQGEPLAALSRIADGSHRQISIKPGDTVIFSSNPIPGNTTSVNHLINKLYEAGADVV 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 VH SGH + K M + +P+ + +HGE V H E A G+ Sbjct: 359 HGKIH-NVHTSGHGGQEEQKMMIELTKPEYFIPVHGEYRMQVIHTETAQATGMAKDHTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG +L L I ++ D + D+ + R+ L+ G + V +D Sbjct: 418 LENGDVLALTKTSSRIAGKIQIPDVFVDTSSTSEVGDIVVHDRKILAEEGLVVVVATIDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + + K + + ++ + + D + L+++I Sbjct: 478 QHQRVLAGPDILSRGF-VYMRESTDLITAAQKHIYHLLRVEMAKETKSDERELKKNIIET 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++P++ I + Sbjct: 537 LQDFLYSRTERRPMILPMIIE 557 >gi|329923198|ref|ZP_08278684.1| ribonuclease J 1 [Paenibacillus sp. HGF5] gi|328941524|gb|EGG37814.1| ribonuclease J 1 [Paenibacillus sp. HGF5] Length = 572 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 162/554 (29%), Positives = 277/554 (50%), Gaps = 11/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG+GEIG NM YG + I+ID G+ FP ++ GVD + PDI +++ + Sbjct: 26 VRIFALGGLGEIGKNM----YGVEFKNEIIIIDAGLKFPDAEMSGVDYIIPDIRYLLDNK 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH GA+ + + +P+Y IGL+ AK R+ + F Sbjct: 82 HKVKGMFLTHGHEDHIGAIPYVLRQIQMPIYGGALTIGLVRAKLEEHRLLDQSDLRIFHE 141 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + S+ R HSIP+ +V+ +P G IVHTGD+K D + + Sbjct: 142 DETIAFRHLSVHFFRTTHSIPDAFGVVVETPYGPIVHTGDFKFDFTPED-KPANLHKILQ 200 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG G+LALM DSTN+ R+G SE+ + +I + G +L TF+S+V R++ +++ Sbjct: 201 IGGRGVLALMADSTNSERDGFTPSERTVGDSILRLFHECPGRILFATFASNVHRLQQVVE 260 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRKI ++G S+++V + ++G I+ D + + ++ Y +Q+++I TGSQGE Sbjct: 261 AAIRTGRKIAIVGRSMEKVFVIGQELGYIRVPDGMMIDVKAVNRYRDDQVLIICTGSQGE 320 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL +++ G R++++ +DTVIFSS IPGN + + L+ G V Sbjct: 321 PNAALTRIASGAHRSIQIHPEDTVIFSSSPIPGNTQNVNRSIDLLMRAGAEVKYGSIL-D 379 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH DLK M +RP+ V IHGE ++ H+ LA+Q G+ V + G L Sbjct: 380 IHTSGHGCREDLKLMISSLRPKYFVPIHGEYRMMLNHRHLAVQVGVPDSNVYLMNIGNTL 439 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 LF + + G + + + +R QL+ G + V + ++ + Sbjct: 440 SLFRNYARKGRNIPSGDVYINNGELRTHEKELLEERVQLAHDGVVIVAITINRETRKLLS 499 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G Y D + + + + + R + + ++ L K+ Sbjct: 500 GPELITRGF-VYMQDSKPLLRRAEAMLRKQLNKAGEQREYNRAAWEQMTNNTLNRYFKRE 558 Query: 542 WGKKPLVTVFINKI 555 G+ P + I ++ Sbjct: 559 LGRSPYIMPSIMEV 572 >gi|325831381|ref|ZP_08164635.1| hypothetical protein HMPREF9404_5147 [Eggerthella sp. HGA1] gi|325486635|gb|EGC89083.1| hypothetical protein HMPREF9404_5147 [Eggerthella sp. HGA1] Length = 641 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 284/559 (50%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ IG NM ++ I+ D G+ FP D+ PGVDL+ PD T+++ Sbjct: 92 NATLKIIPLGGLDAIGKNMTVFE----CKGDMILDDAGLMFPDDNHPGVDLILPDYTYVL 147 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L I ITH HEDH G L L L +VP+Y + +GL+E K ++ K Sbjct: 148 ENADKLRGIVITHGHEDHTGTLPYLMKDLDRNVPIYGTKMTLGLIEGKFAEHKI-KNAKL 206 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + GD++ +G F+ E VNHSIP + + +SP GN++HTGD+KLD I G TD Sbjct: 207 VEIKPGDQIKLGCFTAEFFAVNHSIPGAVGVFFQSPAGNVLHTGDFKLDQTPIDGVTTDF 266 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+ +M DSTNA SE + K + I+ AKG V++ +F+S + R+ Sbjct: 267 GALSKFSEIGVDLMMSDSTNAQNPNFTPSEAEVGKELAKIISQAKGRVIIASFASHIHRM 326 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + I D A GRK+V+ G S+ + +A +G + D + P EQ++++ T Sbjct: 327 QQICDAAVANGRKVVVTGRSMIQNTDIARRLGYLSISDTDLIDAYDLKGIPPEQVVIMCT 386 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ GE R +++ E DTVI S+ +PGNE A+ + N L + G V + Sbjct: 387 GSQGEPLSALARIANGEHRTIQMDEGDTVIVSATPVPGNEKAVTRVINGLAKIGADV-YD 445 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +LK + ++P+ + +HGE HL AH LA G+ V Sbjct: 446 KNRARVHVSGHAGAEELKLVLSIVQPKAFMPVHGEATHLRAHARLAEATGVPTDNVFICE 505 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG+ L L + + V G+ DG +G + + +R L G ++ + Sbjct: 506 NGESLELTSQGVVRGETVQSGIVFVDGLSVGDTSQGVLDERNALGSQGFAAIAAAVSPKG 565 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G +I GI GD + + TV + K +++ AL S Sbjct: 566 KNVVGNVQIEMHGI--TGGDDDFLVREAQGTVKNALGRAMGKGGGQ-KEWKKAGRDALLS 622 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + +P+V V + ++ Sbjct: 623 LLWERTKTRPMVIVNLLEV 641 >gi|328955578|ref|YP_004372911.1| RNA-metabolising metallo-beta-lactamase [Coriobacterium glomerans PW2] gi|328455902|gb|AEB07096.1| RNA-metabolising metallo-beta-lactamase [Coriobacterium glomerans PW2] Length = 555 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 175/560 (31%), Positives = 285/560 (50%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+ L +PLGG+ IG NM + G +++D G+ FP D PG+DLV PD T++ Sbjct: 4 KNQPLRIIPLGGLDGIGKNMTVLECGP----DMVLLDAGLMFPDDSQPGIDLVLPDYTYV 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L I ITH HEDH GAL L L+ VP+Y+S +GL+E K ++ K Sbjct: 60 LENESKLRGIVITHGHEDHIGALPYLLQDLNNKVPIYSSKLTLGLIEGKLAEFKI-KSPR 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +GDK+++G S+ + HSIP + I++ GN++HTGD+KLD I G Sbjct: 119 FRPVVSGDKIELGGISVSFFSMTHSIPGGFGVFIQTSQGNVMHTGDFKLDQTPIDGVRPA 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D + EGI L+ DSTNA G SE + + +Y+++K A+G V V +F+S + R Sbjct: 179 FDLINRFAGEGIDLLLSDSTNANMPGFTKSEAAVGEALYEVIKEAQGRVFVASFASHIHR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIA 298 ++ + D A GRKIV+ G S+ VA ++G +K D + P +++V+ Sbjct: 239 LQQVCDAARSCGRKIVVTGRSMLTNTRVARELGYLKIDARDILDAYDVSGIPDSKIVVLC 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ GE + + + E DTVI S+ +PGNE A+ + N L + G V Sbjct: 299 TGSQGEPLSALSRMANGEHKTLSIRETDTVIISATPVPGNEKAVQQVINSLAKLGCEV-Y 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + ++ VHVSGH +LK M P + +HGE +HL AH +LA + GI + + Sbjct: 358 DKSQKLVHVSGHGSQEELKLMLAMAHPTHFMPVHGETVHLRAHADLARRLGIPDERIFLL 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L + + + V G+ DG IG + + R++L+ G ++V ++ Sbjct: 418 DNGDSLEMRDGSVRVGPSVESGVVYVDGLRIGDTDPIVLRDRQKLANDGTVTVVAIVSLR 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD-LKLLRESISSALR 535 E G+ D +++ ++ LR+++ L Sbjct: 478 SKRIDAVEFSGRGVSFTIDDS--FSADASASIMRSIEKGSFNYTNSGTDALRKAVRDVLS 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + +P++ + ++ Sbjct: 536 NFIWSRTHTRPMIIPVVMEV 555 >gi|228924879|ref|ZP_04088034.1| Ribonuclease J 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228834797|gb|EEM80281.1| Ribonuclease J 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 554 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 281/562 (50%), Gaps = 15/562 (2%) Query: 1 MKNEEL---VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ LGG+GEIG NM Y + D G FP DL G+D V PD Sbjct: 1 MKQSKVANTKVFALGGLGEIGKNMYAIEYENEIIII----DSGFKFPGPDLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +++ + + IFITH HEDH G + L+ + +YA FA+ L+++K +S Sbjct: 57 YSYLENNKDKIKGIFITHGHEDHIGGIPFLFKRIKTTIYAGDFALALIQSKLEEHNIS-D 115 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + I+ ++ + + HSIP++ + + +P GNIVHTGD+K D + +V Sbjct: 116 VEMINITDDKVINFQYMKVRFFQTTHSIPDSFGIAVTTPNGNIVHTGDFKFDFTPVGTEV 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + IG EG+L L+ DSTN+ G +SE IKK+I I + G +L TF+S+V Sbjct: 176 -NLHKIAEIGKEGVLCLLSDSTNSEVNGFSMSENNIKKSIKQIFSKSTGRILFATFASNV 234 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ ++ + RKI++LG SL + + + +G I+ D +F+ P++QL + Sbjct: 235 HRIQQVVQASIDKNRKILILGRSLDKTILIGKQLGYIQAPDNMFIGVHEINDIPKQQLTI 294 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG QGEP +AL+++ G + +++ +DT++ SS IPGN + + I N+L + V + Sbjct: 295 ICTGCQGEPMAALSRIVDGNHKRIQIMPQDTIVLSSSPIPGNILRVNRIINQLSKMPVNI 354 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 +H SGH + K M +P+ + IHGE L H ELA++ G+ Sbjct: 355 FHNKTSA-IHTSGHAAQEEQKLMLSLFKPKYFMPIHGEYRMLKKHAELAMECGVSPQNCF 413 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + NG++L + + +I + DGF IG ++ + RR LS G + +++ LD Sbjct: 414 IMDNGQVLEISKNEAKISKVISSQEVYVDGFGIGDIGNIVLRDRRLLSQEGVIIISMNLD 473 Query: 475 NH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P IV G Y + K + V+ + L +++++ A Sbjct: 474 RKAKQLVSSPAIVTRGF-VYIRQSDSLIKKIENLVLQCISSLSMGGIIQWAQIKQAVIEA 532 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L G++P++ I ++ Sbjct: 533 LEPFLLAETGRRPMILPIIMEV 554 >gi|23465758|ref|NP_696361.1| hypothetical protein BL1192 [Bifidobacterium longum NCC2705] gi|23326444|gb|AAN24997.1| widely conserved hypothetical protein with metallo-beta-lactamase domain [Bifidobacterium longum NCC2705] Length = 637 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 290/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 80 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 135 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 136 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 193 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 194 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 253 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 254 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 313 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 314 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 373 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 374 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 432 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 433 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 492 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 493 DGDVVDLYHGRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 552 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 553 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 608 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 609 WVARQLHRKPMIVPVVADIAQD 630 >gi|95928584|ref|ZP_01311331.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95135374|gb|EAT17026.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 547 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 187/552 (33%), Positives = 283/552 (51%), Gaps = 11/552 (1%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 LPLGG+GEIG+NM Y K ++IDCG+ FP+ + G+DLV PD++ + + R+++ Sbjct: 2 LPLGGLGEIGLNMMALEYA----GKIVLIDCGLMFPEAHMLGIDLVLPDVSCLEERREDI 57 Query: 69 MAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + ITH HEDH GA+ L+ L P++A+ + LL+ K ++ + Sbjct: 58 CGLVITHGHEDHIGAIPFLYEQLGRPPLFATRLTLALLKKKLEEFELNLNQSMTQIVPRE 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 DVG F+IE RV HS+P+ + L +R G +VH+GD+KLD + G TD L G Sbjct: 118 TFDVGPFTIEPFRVAHSVPDGVGLAVRCGAGLVVHSGDFKLDATPLDGQSTDVARLAQYG 177 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 EG+L L+ DSTN G SE+ + DIM+ A G V V TFSS++ R++ +D A Sbjct: 178 EEGVLLLLADSTNVETPGFAGSERDVGPRFRDIMEQANGMVFVATFSSNIHRVQQAVDAA 237 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 GRK+ L G S+ VA + + + YPR+Q+ VI TGSQGEPR Sbjct: 238 LACGRKVALYGRSMVSNCGVARVYDALTIPESELIDVRQLADYPRDQVAVITTGSQGEPR 297 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 SALA+L+ + + E D VI SSR IPGNE AI + N+L G V + VH Sbjct: 298 SALARLAADDHPQFAIEENDCVILSSRFIPGNEKAITSVINQLYRLGAEVHYQRT-SGVH 356 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNGKMLRL 424 VSGH +LK++ +RPQ + IHGE HL+ H LA Q G+A V NG+ + + Sbjct: 357 VSGHASREELKQLLALVRPQSFIPIHGEFRHLMQHARLAQQVGVAQERSLVVENGQPVLV 416 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVP 483 +++++ V G L DG +G + + R +L+ G + + + + P Sbjct: 417 SAHGMKLLEPVETGRVLVDGKGVGDVGMMELRDRHRLARHGTVMAVLAVSRSKGTLLHGP 476 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 E+V G + + + + V + + D +R I L K+ Sbjct: 477 ELVSRG-CLPEPNSDVLLAEAAEKVRDMLGEHHLSSLTDWDDVRIEIRQTLTRFFKRRLQ 535 Query: 544 KKPLVTVFINKI 555 ++PLV I ++ Sbjct: 536 RRPLVLPVIIQL 547 >gi|229817273|ref|ZP_04447555.1| hypothetical protein BIFANG_02533 [Bifidobacterium angulatum DSM 20098] gi|229785062|gb|EEP21176.1| hypothetical protein BIFANG_02533 [Bifidobacterium angulatum DSM 20098] Length = 626 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 289/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 66 RKGSMRITPLGGLGEIGRNMNVVEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 121 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + EAK ++ Sbjct: 122 KDRLDEVEALVLTHGHEDHIGGVPYLLRLRPDIPLIGSKLTLAFAEAKCKEHHINPTKVE 181 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + DK+ G F +E + V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 182 VTGR--DKLKAGPFDLEFINVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 239 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 240 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 299 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 300 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEDTVVDLKQANDIQDDKLVYMCT 359 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 360 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 418 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 419 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 478 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 479 DGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTDA 538 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + +I + D KD L++ + L S Sbjct: 539 REVVSGPKIYLNAVAEDESE----FDKVRHQIIEQLNDAMMTGAKDTHKLQQIMRRTLGS 594 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I+ Sbjct: 595 WVARQLHRKPMIVPVVADIATD 616 >gi|84516716|ref|ZP_01004074.1| metallo-beta-lactamase family protein [Loktanella vestfoldensis SKA53] gi|84509184|gb|EAQ05643.1| metallo-beta-lactamase family protein [Loktanella vestfoldensis SKA53] Length = 559 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 195/561 (34%), Positives = 308/561 (54%), Gaps = 7/561 (1%) Query: 1 MKN----EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVF 55 M N L++LPLGG GEIGMN +YGYG + I++D G++FP D PGVD++ Sbjct: 1 MSNAKTANRLIYLPLGGAGEIGMNAYVYGYGPAGKERLIVVDLGITFPDMDSTPGVDIIL 60 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 PDI+++ R + IFITHAHEDH GA+ W L PVYA PF + K S Sbjct: 61 PDISWLTARRHQIDGIFITHAHEDHVGAVGHCWQQLGAPVYARPFTANIARRKLEEHGQS 120 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + + G F + + ++HSIPE+ L+I +P G +VHTGD+K+D++ ++G Sbjct: 121 PNVVKVVDPYPHVITCGPFKVSYLPISHSIPESAGLLIDTPDGRLVHTGDFKIDENPVVG 180 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D + + G+ AL+CDSTN E SE + I ++M++A G V+ TTF+S Sbjct: 181 DPWNAALWEEVAQPGVKALICDSTNVFSENAGRSESTLAPAITEMMRHATGMVVATTFAS 240 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V+R++++ A+ GR IVLLG +++ +V A G++ +S E PR+ L+ Sbjct: 241 NVARLQTLATAAKAAGRSIVLLGRAMRAMVDAATKEGLLTDFPAVISVEDALSVPRQNLM 300 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ TGSQGE R+A AQL++G +KL E DT +FSS+ IPGNE + I N+L E GV Sbjct: 301 LLVTGSQGERRAASAQLAQGSYLGMKLKEGDTFLFSSKTIPGNERGVIKIMNQLSELGVD 360 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 V+ + HVSGH DL RM++ I+ QVL+ +HGE HL H +LA G+ + Sbjct: 361 VVDDAG-GKYHVSGHANRPDLVRMHKIIKAQVLIPMHGEHRHLREHAKLAEASGMTGI-V 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG M+ L + ++ + + G DG + D + R +++ GH+ V +++D Sbjct: 419 AVNGMMIDLSGNRPKVAEYIETGRTYLDGSVQVGALDGVVRDRIRMALNGHMIVTLIIDE 478 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 ++ G P + +G+P + + ++ + + + D L + I R Sbjct: 479 DGDMLGDPWVEIMGLPETGRNDVPLVDVVEEDLAQFIGRAHAKTLADDDKLEKEIKMIAR 538 Query: 536 SLLKKVWGKKPLVTVFINKIS 556 + GKKP VTV I++++ Sbjct: 539 KSAQGEIGKKPEVTVIISRLA 559 >gi|302383066|ref|YP_003818889.1| RNA-metabolising metallo-beta-lactamase [Brevundimonas subvibrioides ATCC 15264] gi|302193694|gb|ADL01266.1| RNA-metabolising metallo-beta-lactamase [Brevundimonas subvibrioides ATCC 15264] Length = 558 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 204/555 (36%), Positives = 318/555 (57%), Gaps = 5/555 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N+ELV+LPLGG GE+GMN+ YGYG R+WI++D GV+F PGVD++ PD F+ Sbjct: 7 NDELVYLPLGGSGEVGMNLNCYGYGPEDDRQWIIVDVGVTFGDQSTPGVDIIVPDPAFLE 66 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + I +THAHEDH GAL LW + P+YA+PF L+ K + + + I Sbjct: 67 --GETIRGILLTHAHEDHIGALPWLWERMKAPLYATPFTAFLIREKLRDRGL-RDVKIIE 123 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G VD+G F+I+ + + HSI E L I +P+G + HTGDWKLD + I+G TD + Sbjct: 124 VPMGGHVDLGPFAIDFITMTHSIAEPSGLKIATPLGTVFHTGDWKLDPNPIIGKPTDIAA 183 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSSSVSRIR 241 + +G+EG+LA++CDSTN EG SE + + I KG + V F+S+V+R+ Sbjct: 184 IQKMGDEGLLAMVCDSTNVFVEGEAGSELEAQDGLIALIGSLKKGKIAVGCFASNVARMV 243 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+I A++ GR++ L G S+ R+ + A VG+ + LS++ +P ++++ + TGS Sbjct: 244 SVIKAADKAGRRVALAGRSMHRITAAAKHVGLFNDSKAILSEDEARHWPADEILYLCTGS 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+AL++++ G +KL D IFSSR IPGNE+AI +++RL ++GVR+ E Sbjct: 304 QGEDRAALSRVADGSHPFIKLGLGDHCIFSSRVIPGNELAIAELQDRLADRGVRLYTEKD 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP +++++MY W RP+V V HG HL+ H LA G+ RNG + Sbjct: 364 HPGIHVSGHPCRDEMRQMYAWARPRVSVPTHGMRRHLMEHAALARDLGVPETVTPRNGDL 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL P I+DEV +G DG ++ + +RR S G L V+ +D I Sbjct: 424 VRLAPGAAAIVDEVPNGRLYVDGGMVVTEKGEALRERRHASTNGVLVVSFAMDKRGKIVS 483 Query: 482 VPEIVDIGIPAYD-GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 ++ IG+P + G L + V V L R D ++ +++ L+ ++ Sbjct: 484 DIDVRGIGLPGDEVTTLGDSLDDLAERVEQAVNSLKGEARDDDMVVEQAVGRVLKKASQQ 543 Query: 541 VWGKKPLVTVFINKI 555 +W ++P+V I ++ Sbjct: 544 IWDRRPIVETVILRL 558 >gi|261409393|ref|YP_003245634.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261285856|gb|ACX67827.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 572 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 162/554 (29%), Positives = 278/554 (50%), Gaps = 11/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG+GEIG NM YG + I+ID G+ FP ++ GVD + PDI +++ + Sbjct: 26 VRIFALGGLGEIGKNM----YGVEFKNEIIIIDAGLKFPDAEMSGVDYIIPDIRYLLDNK 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH GA+ + + +P+Y IGL+ AK R+ + F Sbjct: 82 HKVKGMFLTHGHEDHIGAIPYVLRQIQMPIYGGALTIGLVRAKLEEHRLLDQSDLRIFHE 141 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + S+ R HSIP+ +V+ +P G IVHTGD+K D + + Sbjct: 142 DETIAFRHLSVHFFRTTHSIPDAFGVVVETPYGPIVHTGDFKFDFTPED-KPANLHKILH 200 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG G+LALM DSTN+ R+G SE+ + +I + + G +L TF+S+V R++ +++ Sbjct: 201 IGGRGVLALMADSTNSERDGFTPSERTVGDSILRLFQECPGRILFATFASNVHRLQQVVE 260 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + GRKI ++G S+++V + ++G I+ D + + ++ Y +Q+++I TGSQGE Sbjct: 261 AAIRTGRKIAIVGRSMEKVFVIGQELGYIRVPDGMMIDVKAVNRYRDDQVLIICTGSQGE 320 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL +++ G R++++ +DTVIFSS IPGN + + L+ G V Sbjct: 321 PNAALTRIASGAHRSIQIHPEDTVIFSSSPIPGNTQNVNRSIDLLMRAGAEVKYGSIL-D 379 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH DLK M +RP+ V IHGE ++ H+ LA+Q G+ V + G L Sbjct: 380 IHTSGHGCREDLKLMISSLRPKYFVPIHGEYRMMLNHRHLAVQVGVPDSNVYLMNIGNTL 439 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 LF + + G + + + +R QL+ G + V + ++ + Sbjct: 440 SLFRNYARKGRNIPSGDVYINNGELRTHEKELLEERVQLAHDGVVIVAITINRETRKLLS 499 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G Y D + + + + + R + + ++ L K+ Sbjct: 500 GPELITRGF-VYMQDSKPLLRRAEAMLRKQLNKAGEQREYNRAAWEQMTNNTLNRYFKRE 558 Query: 542 WGKKPLVTVFINKI 555 G+ P + I ++ Sbjct: 559 LGRSPYIMPSIMEV 572 >gi|257068230|ref|YP_003154485.1| putative hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] gi|256559048|gb|ACU84895.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] Length = 564 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 168/559 (30%), Positives = 290/559 (51%), Gaps = 15/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L +PLGG+G++G NM + YG + +++DCGV FP++ PGVDL+ PD Sbjct: 15 LEEGTLRIVPLGGLGDVGRNMTVLEYG----GRLLVVDCGVLFPEESQPGVDLILPDFDL 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ AI +TH HEDH GA+ L +P+ S + + AK R+ Sbjct: 71 IADRLEDVEAIVLTHGHEDHIGAVPYLLRQKPDIPLVGSELTLAFVTAKLREHRIRPVTR 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G + +G F E V VNHSIP+ +A+ + +P G ++HTGD+K+D + G +TD Sbjct: 131 TV--AEGRQEGLGPFDCEFVAVNHSIPDALAVHVTTPAGTVLHTGDFKMDQLPLDGRITD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G G+ M DSTNA G + E+ I + I A+ ++V +FSS V R Sbjct: 189 LRAFARLGEAGVDLFMTDSTNAEVPGFTVGEQQIGPTLQSIFARAQQKIVVASFSSHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A GRK+ +G S+ R + +A ++G ++ + + EQ++++ Sbjct: 249 VQQVLDAAAAHGRKVAFVGRSMVRNMRIAAELGFLEVPEDTLIDVRRIDDLSEEQVVLMC 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++ + R V + D VI +S IPGNE A+ + N L+E G VI Sbjct: 309 TGSQGEPMAALGRIANRDHR-VSVGPGDVVILASSLIPGNENAVFRVVNGLMELGAEVIH 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VH SGH +L Y +RP+ ++ IHGE HL+A+ +A G+ V Sbjct: 368 KG-NATVHTSGHASEGELLYCYNIVRPKNVMPIHGEVRHLIANGRIAEATGVPRERVVLA 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 R+G ++ L E + EV +G DG +G+ ++ + RR L G +S+ ++D+ Sbjct: 427 RDGHVVDLRDGIAETVGEVPNGYVYVDGSSVGEISETDLKDRRILGDEGFISLFAVVDSR 486 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + PEI G+ I ++ + V + P+ R+D L++ + + Sbjct: 487 TGALIAGPEIHARGVAEDAQVFETIRPEIIAALEQAVTEQPE--RRDTYQLQQVMRRVVG 544 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 545 RYVGRRLRRRPMIIPVVVE 563 >gi|259507475|ref|ZP_05750375.1| ribonuclease J (RNase J) [Corynebacterium efficiens YS-314] gi|259164963|gb|EEW49517.1| ribonuclease J (RNase J) [Corynebacterium efficiens YS-314] Length = 584 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 281/555 (50%), Gaps = 15/555 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 19 NGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEN 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + A+ +TH HEDH GA+ L +P+ S F + L+ AK R+ K+ I Sbjct: 75 HLNRVEALVVTHGHEDHIGAIPWLLKLRHDIPIIGSRFTLALIAAKCKEHRLRPKL--IE 132 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G F+I VNHSIP+ + L I++P G ++HTGD KLD G TD + Sbjct: 133 VNEQSNENRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPTDGRPTDLPA 192 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+ ++CDSTNA G SE I + ++ AK V++ +F+S+V R+++ Sbjct: 193 LSRFGDEGVDLMLCDSTNATTPGVSGSEAEIAPTLKRLVSEAKQRVILASFASNVYRVQA 252 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 +D A RK+ G S+ R + +A +G +K +S + ++++I TG+ Sbjct: 253 AVDAAVAANRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIISMDDASRMAPHKVMLITTGT 312 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G VI Sbjct: 313 QGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVITGR- 371 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +NG Sbjct: 372 DAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVQRENVVLAQNG 431 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L ++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 432 VVVDLVNGQARVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITCVIDNRTGR 491 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G D + + + TT+ DL D + + + L + Sbjct: 492 LLERPKVETTGFS---EDSKAMMPEVAELAETTMNDLAAEGENDPYRMVQQMRRRLSRFV 548 Query: 539 KKVWGKKPLVTVFIN 553 ++ W ++P++ + Sbjct: 549 EQKWKRQPVIMPTVI 563 >gi|34556520|ref|NP_906335.1| hypothetical protein WS0066 [Wolinella succinogenes DSM 1740] gi|34482234|emb|CAE09235.1| conserved hypothetical protein [Wolinella succinogenes] Length = 681 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 153/555 (27%), Positives = 290/555 (52%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ PLGG+GEIG N+ + + I++D G+SFP D++ GVD++ PD +++ Sbjct: 130 KAKVRITPLGGLGEIGGNITVIE----TENSAIVVDVGMSFPDDEMHGVDILVPDFSYLE 185 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + + + ITHAHEDH GA+ L+ + P+Y +P +G++ +K + + + Sbjct: 186 AIKHKIAGVVITHAHEDHIGAVPYLYKQMQFPLYGTPLPLGMIGSKFDEHGLKRFRSLFR 245 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +G F +E + + HSI + +L I++ G I+HTGD+K+D I G D Sbjct: 246 VVEKRKPIKIGDFEVEWIHMTHSIIDASSLAIKTEAGTIIHTGDFKIDHTPIDGFAADLH 305 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G EG++ ++ DSTN+ R G SE + + +A+G V+++TFSS++ R+ Sbjct: 306 RLAHYGEEGVMLMLSDSTNSHRPGHTESEATVGPTFDKLFMSAEGRVIMSTFSSNIHRVY 365 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL-FLSDESFGLYPREQLIVIATG 300 I + GRK+ ++G S+++ + ++ ++G I Q F+ Y ++++++ TG Sbjct: 366 QAIQHGIKYGRKVAVIGRSMEKNLEISRELGYISIPQNVFIDAHEVAKYADKEVLIVTTG 425 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ DT+I S++AIPGNE ++ + N L++ G +V +D Sbjct: 426 SQGETMSALYRMATDEHRHIKIKPTDTIILSAKAIPGNEASVSSVLNFLLKAGAKVAYQD 485 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH + K M + ++P+ + +HGE HLV HK+ A++ GI + + + Sbjct: 486 F-SEIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHLVKHKDTAMRCGIPEKNILLMED 544 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G + + P I + V G D + + + + R++L+ G +S+ + Sbjct: 545 GDQIEVAPTYIRKVRSVKTGKVFIDNQINKQIDNDVVLDRQKLATDGIVSIIAQVSPAQQ 604 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + GI D + K + + + + + + + + I +R Sbjct: 605 KVIDKPRVTSFGIVG-DRESRAFAKEMEEVLEHFLKNCKKEFLQSSRAAENEIRQVVRKH 663 Query: 538 LKKVWGKKPLVTVFI 552 + + K P++ I Sbjct: 664 IFRKTKKYPMIVPTI 678 >gi|227546371|ref|ZP_03976420.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622374|ref|ZP_04665405.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|227213352|gb|EEI81224.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514371|gb|EEQ54238.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 630 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 290/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 73 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 128 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 129 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 186 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 187 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 246 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 247 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 306 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 307 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCT 366 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 367 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 425 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 426 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 485 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 486 DGDVVDLYHGRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDN 545 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 546 HEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 601 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 602 WVARQLHRKPMIVPVVADIAQD 623 >gi|72161196|ref|YP_288853.1| metallo-beta-lactamase family hydrolase [Thermobifida fusca YX] gi|71914928|gb|AAZ54830.1| putative hydrolase of the metallo-beta-lactamase superfamily [Thermobifida fusca YX] Length = 561 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 287/557 (51%), Gaps = 17/557 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L +PLGG+GEIG NMA+ Y K ++IDCGV FP ++ PGVDL+ PD ++ Sbjct: 17 NTLRIIPLGGLGEIGRNMAVLEY----EGKMLIIDCGVLFPAEEQPGVDLILPDFEYLRG 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ AI +TH HEDH G + L +P+ S + LL AK R+ + + Sbjct: 73 RLDDVEAIVLTHGHEDHIGGVPFLLRERTDIPLVGSRLTLALLTAKLGEHRIKPTLIQV- 131 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G++ G+F++E VNHSIP+ +A+ +R+P GN++HTGD+K+D + +TD Sbjct: 132 -AEGEQHTFGSFNLEFFAVNHSIPDALAVGVRTPAGNVLHTGDFKMDQLPLDNRITDLGG 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G EG+ LM DSTNA G SE+ I + + A+ ++V F+S + R++ Sbjct: 191 FARFGAEGVDLLMSDSTNAEVPGFVTSERDIAGVLDTVFAKAEKRIIVACFASHIHRVQQ 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGS 301 ++D ++ GRK+ +G ++ R +++A ++G +K L + P ++++++ TGS Sbjct: 251 VLDASQAHGRKVAFVGRTMIRNMNIARELGYLKVPGDLLVDARDLEALPSDEVVLVCTGS 310 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL++++ + + + DTVI +S IPGNE ++ + N L G +V+ + Sbjct: 311 QGEPMAALSRMANRDH-QIHIEPGDTVILASSLIPGNENSVNRVINGLTRWGAKVVHKG- 368 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 VHVSGH +L + +RP+ + IHGE HL AH +LA+ GI V +G Sbjct: 369 NALVHVSGHAPAGELLYVLNMVRPRNFMPIHGEWRHLRAHAQLAMLSGIPEDRVVIAEDG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L I V G DG +G + + RR L G +SV +++++ Sbjct: 429 VVVDLHDGKARISGVVQAGYVYVDGTSVGDVTEAALKDRRILGEEGFISVVIVVESTTGK 488 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + G P+I G + + + + D LR+ + ++ + Sbjct: 489 LIGEPQIHTRGAGIDLEAYDDVIPKIQEVLEQA----AAEGVNDPAQLRQLVRRSIGRWV 544 Query: 539 KKVWGKKPLVTVFINKI 555 + + ++P++ + +I Sbjct: 545 NESYRRRPMLVPVVIEI 561 >gi|317508370|ref|ZP_07966043.1| metallo-beta-lactamase superfamily protein [Segniliparus rugosus ATCC BAA-974] gi|316253327|gb|EFV12724.1| metallo-beta-lactamase superfamily protein [Segniliparus rugosus ATCC BAA-974] Length = 579 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 295/558 (52%), Gaps = 15/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L + LGG+ EIG NM ++ YG K +++DCGV FP+D PGVDL+ PD + I Sbjct: 21 LRVVALGGLSEIGRNMTVFEYG----GKLLIVDCGVLFPEDRQPGVDLILPDFSSIEDRA 76 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++++ + +TH HEDH GA+ L VPV S F + L+ AK R ++ Sbjct: 77 EDIVGLVLTHGHEDHIGAVPFLLRICPDVPVIGSKFTLALVAAKCREHRQKPTFVQVTG- 135 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ VG F +E + VNHSIP+ +A+ IR+P G +VHTGD KLD + G +TD L Sbjct: 136 -GETRGVGEFGLEFLTVNHSIPDALAVAIRTPAGVVVHTGDIKLDQLPLDGKLTDLAGLS 194 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I + + ++ A V+V +F+S V RI+ +I Sbjct: 195 RLGDEGVDLFLVDSTNAEVPGFVTPEREIGEVLDRVIGKAGQRVIVASFASHVHRIQQVI 254 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATGSQG 303 D+A GRK+ +G S+ R + +A D+G + Q + + P +++ I+TGSQG Sbjct: 255 DVAVANGRKVAYVGRSMVRNMKIAQDLGYLTVPQGVVVNLDTAAELPDSKVVFISTGSQG 314 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RG+ +++ + D V+ +S IPGNE ++ + N L G +V+ + Sbjct: 315 EPLSALSRMARGDHQSISIRSGDLVVLASSLIPGNENSVFAVVNGLTRLGAKVVTQQT-A 373 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L +Y +RP+ + +HGE HL A+ LA G+ V V NG Sbjct: 374 KVHVSGHASAGELLFLYNAVRPKNAMPVHGEWRHLRANGALAQSTGVPQERVVLVENGVA 433 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI-F 480 + L +++ V G DG +G + +++R L G +++NV++D+ + Sbjct: 434 VDLKDSVAKVVGRVPVGHVYVDGLSVGDVGESTLSERLILGEGGFIAINVVVDSATGVAV 493 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---LPQFRRKDLKLLRESISSALRSL 537 P ++ G + +L++ ++ D + D + +++ + Sbjct: 494 SPPALLGKGFSDDPKALAEAEELVVAELVRLAGDRGPNAKSTTVDTHQIAQAVRRTVGRW 553 Query: 538 LKKVWGKKPLVTVFINKI 555 + + + ++P++ + + Sbjct: 554 VSETYRRRPMIVPTVTAV 571 >gi|238855251|ref|ZP_04645570.1| ribonuclease J 1 [Lactobacillus jensenii 269-3] gi|260664611|ref|ZP_05865463.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|282932456|ref|ZP_06337881.1| ribonuclease J 1 [Lactobacillus jensenii 208-1] gi|238832143|gb|EEQ24461.1| ribonuclease J 1 [Lactobacillus jensenii 269-3] gi|260561676|gb|EEX27648.1| metallo-b-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|281303405|gb|EFA95582.1| ribonuclease J 1 [Lactobacillus jensenii 208-1] Length = 560 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 285/561 (50%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K +E+ +GG+GEIG NM Y + +++DCG+ FP+DDL G++ V D ++ Sbjct: 4 IKKDEVAVFAIGGLGEIGKNMYCVQY----QDEIVIMDCGIKFPEDDLLGINYVISDYSY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 +K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L++ K + K Sbjct: 60 PVKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKGKLDEHGILKTTE 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 ++ S+ R HSIP+T+ + + +P+G ++ TGD+K D ++ Sbjct: 120 LHEEHEDTVLNFDKLSVTFFRTTHSIPDTLGIAVHTPLGAVIFTGDFKFDLTPVMNQPAP 179 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G+EG+LAL+ DSTNA SE+ + K++ +I+K G ++ TF+S++ Sbjct: 180 DFQRMAKLGDEGVLALLSDSTNAEVSAFTKSERFVAKSLNNIIKGIDGRIIFATFASNLY 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R+ + ++ A + GRKI + G S++ + ID+G + L + + +++ Sbjct: 240 RVSTAVEAAIETGRKIAIFGRSMENGIQNGIDLGYLNVPKDLIVDANEINRLKPSEAMIL 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + + DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 300 CTGSQGEPLAALSRIADGTHRQISIQPGDTVIFSSNPIPGNTLSVNHLINKLMEAGANVI 359 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H LA G+ Sbjct: 360 HGKVN-NVHTSGHGGQEELKMMVRLAKPKYMIPVHGEYRMQVIHTHLAQDAGVPKENTFV 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + G D ++ + R+ LS G + +D Sbjct: 419 LGNGEVIAFSPEGSRIAGHIPAGDVFVDTSGTADVGNVVVRDRQILSEEGLVVAVATVDY 478 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR-RKDLKLLRESISSA 533 H + P+I+ G Y + + K V + + R +R++I + Sbjct: 479 KHQRVLAGPDILSRGF-VYMRESQDLISQAQKNVYHVLRTQMAKKPRPSENDIRKAIIAN 537 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L+ L ++PLV I + Sbjct: 538 LQDFLYARTERRPLVLPMIIE 558 >gi|167755473|ref|ZP_02427600.1| hypothetical protein CLORAM_00987 [Clostridium ramosum DSM 1402] gi|237733700|ref|ZP_04564181.1| beta-lactamase [Mollicutes bacterium D7] gi|167704412|gb|EDS18991.1| hypothetical protein CLORAM_00987 [Clostridium ramosum DSM 1402] gi|229383298|gb|EEO33389.1| beta-lactamase [Coprobacillus sp. D7] Length = 596 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 162/552 (29%), Positives = 273/552 (49%), Gaps = 12/552 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G NM + + +ID GV F ++ LPG+D V PD +++ + K Sbjct: 48 KVFALGGLNEVGKNMYCVEH----DNELFIIDAGVKFAEEGLPGIDYVIPDYSYLKRNEK 103 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G + L + +P +YA+P A +++ K +R++ I Sbjct: 104 KIRGLMITHGHEDHIGGIPFLLQVVKIPFIYATPLASAMIKRKLDEKRLTNATKIIQIDD 163 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++ F+I + NHSIPE+M ++I SP G IV TGD+K D + D D + Sbjct: 164 EYQIKSKYFNIGFFKTNHSIPESMGIIINSPNGRIVETGDFKFDLSPVG-DPADYQKMSF 222 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ ISEK + ++ + + +G ++V TF+S+V R++ I++ Sbjct: 223 LGETGVTLLMSDSTNSEVPTFSISEKKVANSVQEEFRKTEGRLIVATFASNVHRVQQIVE 282 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKI++ G S++ + V+ +G IK D+ F+ E P +++++ TGSQGE Sbjct: 283 AAVKFNRKILVYGRSMENNIQVSRAMGYIKCPDKFFIKSEQAKKLPDNEILILCTGSQGE 342 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL++++ G + VK+ DTV+FSS IPGN ++ + N+L G +V+ A Sbjct: 343 ALAALSRIANGTHKYVKIKPGDTVVFSSNPIPGNAYSVNVVVNKLFRAGAKVLTNTAFNN 402 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K M RP+ +HGE L H EL+ GI + NG + Sbjct: 403 LHTSGHASQEEQKLMMLLTRPKYFFPVHGEYRMLKIHAELSQDVGIPPENSFVLSNGDTI 462 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 L + + DG I + + R+ LS G +S+ + +D+ + Sbjct: 463 LLNNGEARLGPRIHVEDIYVDGNDISGLSTAVLRDRQMLSEDGMVSILISMDSRSGKLLT 522 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D + + K V T + L Q + ++ + L S + Sbjct: 523 RPVIISRGF-VYMKDSFHMIREAEKLVETNLSKLLQ-GKTTFGEIKNTTRDTLSSYFYRK 580 Query: 542 WGKKPLVTVFIN 553 + P++ I Sbjct: 581 TKRNPMIIPVIM 592 >gi|224282521|ref|ZP_03645843.1| hypothetical protein BbifN4_01710 [Bifidobacterium bifidum NCIMB 41171] gi|310286982|ref|YP_003938240.1| metallo-beta-lactamase domain [Bifidobacterium bifidum S17] gi|311063858|ref|YP_003970583.1| metal-dependent hydrolase [Bifidobacterium bifidum PRL2010] gi|313139673|ref|ZP_07801866.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|309250918|gb|ADO52666.1| Conserved hypothetical protein with metallo-beta-lactamase domain [Bifidobacterium bifidum S17] gi|310866177|gb|ADP35546.1| Metal-dependent hydrolase [Bifidobacterium bifidum PRL2010] gi|313132183|gb|EFR49800.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 613 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 288/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 56 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 111 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK Sbjct: 112 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCQEHNQHP--TM 169 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 170 VEVKGRDKLKVGPFNLEFVTVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHKITDL 229 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 230 VEFGKIGEQGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQASRKIIVASFSSHVHRV 289 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D+A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 290 QQVVDVAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVIDLKKAHDVQDDKLVFMCT 349 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 350 GSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVV-N 408 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 409 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPKNVVLAE 468 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 469 DGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGEITDEELEKRRILGTEGFVSSFVVVDTEA 528 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + ++ + D KD L++ + L Sbjct: 529 SEVVTGPKI----FLNAVAEDESEFDKIRHQIVEQLQDAMMQGTKDTHRLQQIMRRTLGG 584 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 585 WIARQLHRKPMIVPVVADIAQD 606 >gi|294500882|ref|YP_003564582.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294350819|gb|ADE71148.1| Metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] Length = 555 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 146/558 (26%), Positives = 276/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E + LGG+GE+G NM + + ++D G FP ++ G+D+V PDIT++ Sbjct: 5 KTENIKISALGGIGELGKNMYVVEI----NENIYVLDAGSKFPGGEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++N+ IF+TH HE+ GA+ + L VPVY + + L++ K + K Sbjct: 61 VENQQNVKGIFVTHGHEEQIGAIPFILQKLDVPVYGTELTLALIKEKLKEYGIKKYEALH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + I R HSI +++ + +++ G IV+TGD+K D +++ D Sbjct: 121 PITSSTVLSFEGVDISFFRTQHSIQDSVGICLQTNQGAIVYTGDFKFDQNSVSIQSADIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + AIG +G+L L+ DSTNA + G +SE I +NI D +KG ++V +SS++ RI+ Sbjct: 181 KMAAIGEQGVLCLLSDSTNADKPGYTVSEAVIGQNITDAFYKSKGRIIVAAYSSNLHRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II A Q GR ++++ S+ +++ +A +G ++ + L + + P + +++ TG Sbjct: 241 QIIHAAYQHGRNLIVMEKSMLKIIDIAAKLGHLQLPEDLIVPVQKLKDLPEHETVILTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP L ++++ + +++ + DTV+ ++ + G+E + + G V+ Sbjct: 301 HHGEPILGLTRMAKQSHKFIQIKQDDTVLLAATPVAGHETTFSKTIDVIFRLGASVVFAQ 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 V SGH +LK M +P+ ++ ++GE A+ +LA Q GI + + Sbjct: 361 R--KVQASGHGSQEELKFMINLTKPKYVMPVNGEYRKQKAYAKLAGQLGISEDHICLLEK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+ + + + G L DG +G ++ + RR LS G L+V V ++ Sbjct: 419 GERVEFKDARMYPSGSIQAGNTLIDGLGVGDIGNIVLRDRRLLSQDGILTVVVTINKRQK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PEI+ G Y + K+ + K V + + + + L+ + +L Sbjct: 479 TVVAGPEIISRGF-VYVRESEKLLEEATKIVQQILEKCMEDKVIEWSSLKLKMRESLNQF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 538 LYEKTRRKPMILPIIMEI 555 >gi|224417854|ref|ZP_03655860.1| hypothetical protein HcanM9_01123 [Helicobacter canadensis MIT 98-5491] gi|253827193|ref|ZP_04870078.1| putative hydrolase [Helicobacter canadensis MIT 98-5491] gi|313141397|ref|ZP_07803590.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510599|gb|EES89258.1| putative hydrolase [Helicobacter canadensis MIT 98-5491] gi|313130428|gb|EFR48045.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 659 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 294/556 (52%), Gaps = 11/556 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N + P+GG+GEIG NM + + I+ID G+SFP D+ GVD++ PD +++ Sbjct: 108 NARVRITPIGGLGEIGGNMTIIE----TQNSAIIIDAGMSFPDSDMHGVDILVPDFSYLE 163 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + + I ITHAHEDH GA+ L+ P+Y + +GL+ +K + K + Sbjct: 164 VIKDKIAGIVITHAHEDHIGAMPYLFKKYQFPIYGTALPLGLIGSKFDEHGLKKFRSLFR 223 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +G F IE + + HSI ++ AL I++ G I HTGD+K+D I G TD + Sbjct: 224 PVEKRKPIRIGEFEIEWIHITHSIVDSSALAIKTEAGVIFHTGDFKIDHTPIDGYPTDLN 283 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G +G+L L+ DSTN+ + G SE + + AKG V+++TFSS++ R+ Sbjct: 284 RIAYYGEQGVLLLLSDSTNSHKSGYTPSEASVGPAFDMLFSRAKGRVIMSTFSSNIHRVY 343 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + GRK+ ++G S+++ + +A +G I +F+ Y E+++++ TG Sbjct: 344 QAIQHGLKYGRKVSVIGRSMEKNLEIARVLGYIDLPQNIFIEAHEVAKYADEEVLIVTTG 403 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ D VI S++AIPGNE ++ +I N + + G +V +D Sbjct: 404 SQGETMSALYRMATDEHRHIKIKPSDIVILSAKAIPGNEGSVSNILNFINKAGAKVYYQD 463 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +H SGH + K M + ++P+ + +HGE H++ HKE A+ G+ + + + Sbjct: 464 F-SEIHTSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHILKHKETAISCGVDEKNIYLMED 522 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + + + + V G D + A+ + R+ L+ G +SV V +D N Sbjct: 523 GDQVEVAHNYLRKVRSVKTGKTYIDNQVNATIANEVVLDRQNLAENGIVSVMVQIDKAKN 582 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P + +GI A + D +K + + I V + + + K + + +ALR L Sbjct: 583 ALIGKPRVQTMGIIA-NKDIISFNKEIEEFFILFVKNCKKELYNNQKAMENEVRNALRKL 641 Query: 538 LKKVWGKKPLVTVFIN 553 + K + P++ I Sbjct: 642 MFKKTKRYPIIFPNII 657 >gi|157692362|ref|YP_001486824.1| metallo beta lactamase [Bacillus pumilus SAFR-032] gi|157681120|gb|ABV62264.1| metallo beta lactamase [Bacillus pumilus SAFR-032] Length = 555 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 156/562 (27%), Positives = 282/562 (50%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIYVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++ + + AIF+TH H++ G + S L VPVY + + LL K ++K Sbjct: 57 ISYLTERADRVKAIFLTHGHDEAIGGVFHCLSKLSVPVYGTKLTLALLREKLKQYGFNQK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 A + + R NHSIP+++ + ++ +G+IV TGD+K D L Sbjct: 117 ADLREVHAKSVITFETTKVSFFRTNHSIPDSVGISFKTSLGSIVCTGDFKFDQTPALNQA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA + G SE ++ I + M NA+ V+V SS++ Sbjct: 177 CDIGEIAKIGNNGVLALLSDSANAEKPGYTPSEALVQDEISNAMYNAENRVIVAVSSSNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +R++ II+ Q GRK+ + G ++ + +AI +G + ++LF+ + + +++ Sbjct: 237 NRVQQIINATNQNGRKLAVAGKNMMTTLQLAIKLGYVTADEELFVPVQEVKKMAKNDVVI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + GS GEP +AL ++++ + + + + DTV+ +S +PG E+ + L G +V Sbjct: 297 LTAGSHGEPLAALTKMAKQNHKQLHIEKDDTVVIASTPLPGQELTYSKTVDFLTRSGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH +A + + + Sbjct: 357 IF--AQKRVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSRIAEEVGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I ++V G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIDKGDVVEFRGQNVKIGEKVHQGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEI+ G Y + ++ + V V + + + L++S+ Sbjct: 475 KQKKQLISGPEIITRGF-VYVRESEELIVKATEMVKGIVKEQTENSIVEWSTLKQSMRDV 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|257791376|ref|YP_003181982.1| beta-lactamase domain-containing protein [Eggerthella lenta DSM 2243] gi|257475273|gb|ACV55593.1| beta-lactamase domain protein [Eggerthella lenta DSM 2243] Length = 590 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 183/559 (32%), Positives = 284/559 (50%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ IG NM ++ I+ D G+ FP D+ PGVDL+ PD T+++ Sbjct: 41 NATLKIIPLGGLDAIGKNMTVFE----CKGDMILDDAGLMFPDDNHPGVDLILPDYTYVL 96 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L I ITH HEDH G L L L +VP+Y + +GL+E K ++ K Sbjct: 97 ENADKLRGIVITHGHEDHTGTLPYLMKDLDRNVPIYGTKMTLGLIEGKFAEHKI-KNAKL 155 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + GD++ +G F+ E VNHSIP + + +SP GN++HTGD+KLD I G TD Sbjct: 156 VEIKPGDQIKLGCFTAEFFAVNHSIPGAVGVFFQSPAGNVLHTGDFKLDQTPIDGVTTDF 215 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+ +M DSTNA SE + K + I+ AKG V++ +F+S + R+ Sbjct: 216 GALSKFSEIGVDLMMSDSTNAQNPNFTPSEAEVGKELAKIISQAKGRVIIASFASHIHRM 275 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 + I D A GRK+V+ G S+ + +A +G + D + P EQ++++ T Sbjct: 276 QQICDAAVANGRKVVVTGRSMIQNTDIARRLGYLSISDTDLIDAYDLKGIPPEQVVIMCT 335 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ GE R +++ E DTVI S+ +PGNE A+ + N L + G V + Sbjct: 336 GSQGEPLSALARIANGEHRTIQMDEGDTVIVSATPVPGNEKAVTRVINGLAKIGADV-YD 394 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VHVSGH +LK + ++P+ + +HGE HL AH LA G+ V Sbjct: 395 KNRARVHVSGHAGAEELKLVLSIVQPKAFMPVHGEATHLRAHARLAEATGVPTDNVFICE 454 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG+ L L + + V G+ DG +G + + +R L G ++ + Sbjct: 455 NGESLELTSQGVVRGETVQSGIVFVDGLSVGDTSQGVLDERNALGSQGFAAIAAAVSPKG 514 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G +I GI GD + + TV + K +++ AL S Sbjct: 515 KNVVGNVQIEMHGI--TGGDDDFLVREAQGTVKNALGRAMGKGGGQ-KEWKKAGRDALLS 571 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL + +P+V V + ++ Sbjct: 572 LLWERTKTRPMVIVNLLEV 590 >gi|237740321|ref|ZP_04570802.1| metal dependent hydrolase [Fusobacterium sp. 2_1_31] gi|229422338|gb|EEO37385.1| metal dependent hydrolase [Fusobacterium sp. 2_1_31] Length = 626 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 163/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ +PLGG+ E+G N + Y + I+ID G FP ++LPG+DLV PD +F+ Sbjct: 71 EKMYVIPLGGLEEVGKNCTIVQY----KDEIIIIDAGAIFPDENLPGIDLVIPDYSFLEN 126 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 127 NKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNALIKSKFENFGVKKNLPKM 186 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + K+ VG F++E V+V HSI ++ +L I++P G++ TGD+K+D + + D Sbjct: 187 VEVGSRSKISVGKYFTVEFVKVTHSIADSYSLSIKTPAGHVFVTGDFKIDLTPVDNEKVD 246 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 247 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 306 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q GRKI + G SL +V +A VG + + + + + ++++++ Sbjct: 307 IQQIIDTAAQFGRKIAIDGRSLLKVFEIAPSVGRLNIPKNILIPISAVEQFQDDEVVILC 366 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N ++ V ++ Sbjct: 367 TGTQGEPLAALSRIAKNMHKHIVLREGDTVIISSTPIPGNEKAVSTNINNILRYDVDLVF 426 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M I P+ + +HGE L AH + A++ G+ + Sbjct: 427 KKL-AGIHVSGHGSKEEQKLMLNLINPKNFMPVHGEYRMLKAHMKSAIETGVPKDKILIT 485 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D Sbjct: 486 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKQ 545 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K ++ + + +D + L+ + L Sbjct: 546 TGKILSGPEMSTKGFVYY-KDSEDTMKEAQDLLLKKIRKEETYLGRDWQDLKGDVRDLLS 604 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + ++ Sbjct: 605 RFFYEKLKRNPIIVPMLLEV 624 >gi|294782585|ref|ZP_06747911.1| metallo-beta-lactamase family protein [Fusobacterium sp. 1_1_41FAA] gi|294481226|gb|EFG29001.1| metallo-beta-lactamase family protein [Fusobacterium sp. 1_1_41FAA] Length = 626 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 281/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ +PLGG+ E+G N + Y + I+ID G FP ++LPG+DLV PD +F+ Sbjct: 71 EKMYVIPLGGLEEVGKNCTIVQY----KDEIIIIDAGAIFPDENLPGIDLVIPDYSFLEN 126 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 127 NKSKIKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNALIKSKFENFGVKKDLPKM 186 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + K+ VG F++E V+V HSI ++ +L I++P G++ TGD+K+D + + D Sbjct: 187 IEVGSRSKISVGKYFTVEFVKVTHSIADSYSLSIKTPAGHVFITGDFKIDLTPVDNEKVD 246 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 247 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 306 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A GRKI + G SL +V +A VG + L + + + ++++++ Sbjct: 307 IQQIIDNAAYFGRKIAIDGRSLLKVFEIAPSVGRLNIPKNLLIPISAVEQFQDDEVVILC 366 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N ++ V ++ Sbjct: 367 TGTQGEPLAALSRIAKNMHKHIMLREGDTVIISSTPIPGNEKAVSTNINNILRYDVDLVF 426 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M I P+ + +HGE L AH + A++ G+ + Sbjct: 427 KKL-AGIHVSGHGSKEEQKLMLNLINPKNFMPVHGEYRMLKAHMKSAIETGVPKDKILIT 485 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D Sbjct: 486 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKQ 545 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K ++ + + +D + L+ + L Sbjct: 546 TGKILSGPEMSTKGFVYY-KDSEDTMKEAQDLLLKKIRKEETYLGRDWQDLKGDVRDLLS 604 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 605 RFFYEKLKRNPIIVPMLLEI 624 >gi|237744251|ref|ZP_04574732.1| metal dependent hydrolase [Fusobacterium sp. 7_1] gi|229431480|gb|EEO41692.1| metal dependent hydrolase [Fusobacterium sp. 7_1] Length = 608 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 55 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 110 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 111 NKSKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSKFENFGVKKDLPKM 170 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 171 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 230 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 231 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 290 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 291 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDEIVILC 350 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 351 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 410 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 411 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 469 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 470 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 529 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 530 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLGKKISKNETYLGRDWADLKGNVRDLLS 588 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 589 RFFYEKLKRNPIILPMLLEI 608 >gi|213692892|ref|YP_002323478.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524353|gb|ACJ53100.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 566 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 169/562 (30%), Positives = 289/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 9 RKGSMRITPLGGLGEIGRNMNVIEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFSYI 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + ++AK + Sbjct: 65 KNRLDKVDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNP--TK 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +K+ VG F +E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 123 VEVAGREKLKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 IG +G+ LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 183 VEFGKIGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRV 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + ++L+ + T Sbjct: 243 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLRQANDIQDDKLVFMCT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G +V+ Sbjct: 303 GSQGEPMAALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVV-N 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 362 RDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAE 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D Sbjct: 422 DGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSAFVVVDTDN 481 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + + ++ + D +D L++++ L S Sbjct: 482 QEVVTGPKIYLNAVAEDESE----FDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGS 537 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 538 WVARQLHRKPMIVPVVADIAQD 559 >gi|152965448|ref|YP_001361232.1| beta-lactamase domain protein [Kineococcus radiotolerans SRS30216] gi|151359965|gb|ABS02968.1| beta-lactamase domain protein [Kineococcus radiotolerans SRS30216] Length = 561 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 156/540 (28%), Positives = 280/540 (51%), Gaps = 17/540 (3%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM ++ + K +++DCGV FP+D PGVDL+ PD + I +++A+ +TH HE Sbjct: 32 RNMTVFEF----DGKLLVVDCGVLFPEDHQPGVDLILPDFSSIADRLDDIVAVVLTHGHE 87 Query: 79 DHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH GA+ L +P+ S + L+EAK R+ + + G G FS E Sbjct: 88 DHIGAVPYLLKLRADIPLLGSQLTLALVEAKLKEHRIKPYTLSV--REGQTEQFGPFSCE 145 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + VNHSIP+ +A+ IR+ G ++HTGD+K+D + +TD ++ +G+EG+ D Sbjct: 146 FIAVNHSIPDALAVAIRTGAGLVLHTGDFKMDQLPLDDRITDLNAFARLGDEGVDLFCVD 205 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STNA G E+ I + + A+ ++V +F+S V R++ +++ A+ GRK+ L+ Sbjct: 206 STNAEVPGFTAPERDIGPVLEQLFGRAEKRIIVASFASHVHRVQQVLNAADAHGRKVALV 265 Query: 258 GSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 G S+ R + +A D+G ++ L + + P ++++++ TGSQGEP +AL++++ + Sbjct: 266 GRSMVRNMGIAADLGYLQVPKNLLIDLKQVDDLPDDRVVLMCTGSQGEPMAALSRMANRD 325 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 R + + DTVI +S IPGNE ++ + N L G V+ + + +HVSGH +L Sbjct: 326 HR-IAIDAGDTVILASSLIPGNENSVYRVVNGLARLGAAVVHQQS-AKIHVSGHASAGEL 383 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDE 434 Y ++P+ ++ +HGE HL+A+ ELA++ G+ V +G ++ L I+ Sbjct: 384 LYCYNILKPRNVMPVHGEYRHLLANAELAVKTGVPRERVVIAEDGVVVDLVDGKAGIVGT 443 Query: 435 VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVDIGIPAY 493 V G DG +G+ + + RR L G +S+ V +D+ + PE G Sbjct: 444 VPVGYVYVDGSSVGEITEADLKDRRILGEEGFISIFVAVDSVTGKVVSGPEFNARGFI-- 501 Query: 494 DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 GDG + V + + D L++ + + + + + ++P++ + Sbjct: 502 -GDGDDRFTAVKSRVEKALNEAST-GPVDTHQLQQIVRRTVGTWVAQAHRRRPMIVPVVV 559 >gi|227504846|ref|ZP_03934895.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] gi|227198537|gb|EEI78585.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] Length = 584 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 181/556 (32%), Positives = 286/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L LGG+ EIG NM ++ Y + ++IDCGV FP PGVDL+ PD I Sbjct: 18 KDALRIYALGGISEIGRNMTVFEY----QDELLIIDCGVLFPSSGEPGVDLILPDFGPIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K + Sbjct: 74 KKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--FV 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V+ G+F VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 132 EVNEKSDVNYGSFRCRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++C+STNA G SE I ++ NAK V++ TF+S+V R++ Sbjct: 192 ALSRYGDEGVDLMLCESTNANIPGVSASEGDIPATFRRLVSNAKQRVIIATFASNVYRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A GRK+ G S+ R + +A +G +K + + ++++I TG Sbjct: 252 AAIDAAVYAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKVLLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +IFSS IPGNE A+ + N L + G VI Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVYGVMNMLSQIGAEVITNK 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 E VH SGH Y +L +Y RP+ ++ +HGE HL A+KELA+ G+ V +N Sbjct: 372 -EAKVHASGHGYGGELLFLYNAARPKNVMPVHGEWRHLRANKELAVSTGVDRDRVVLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 431 GVVVDLRNGRAEVVGQITVGNLYVDGVSMGDVDADTLADRTNLGSGGVVSITCVIDNRTS 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D I + K V +T+ DL D + + + + L Sbjct: 491 RLLEHPAVSTTGFSDDDR---GIVPEVAKLVESTMNDLAAEGENDTYRMVQKLRRKVSKL 547 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 548 MDSKYKREPVILPTII 563 >gi|227488679|ref|ZP_03918995.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542323|ref|ZP_03972372.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091340|gb|EEI26652.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181923|gb|EEI62895.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] Length = 584 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 287/559 (51%), Gaps = 15/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGG+ EIG NM ++ Y + +++DCGV FP PGVDL+ PD ++I Sbjct: 18 KNGLRIVALGGISEIGRNMTVFEY----KNRILLVDCGVLFPSSVEPGVDLILPDFSYIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+ ITH HEDH GA+ L +P+ AS F L+ AK R K+ I Sbjct: 74 DRLDQVEALVITHGHEDHIGAIPYLLRHRPDLPILASKFTCALISAKCQEHRQRPKL--I 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +VD G F+I V HSIP+ + +V+++ G I+HTGD KLD G TD Sbjct: 132 EVNELSEVDRGPFNIRFFNVGHSIPDCLGIVLKTGAGTILHTGDIKLDQTPPDGRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++ G+EGI LMCDSTNA G SE + I ++ AK V++ +F+S+V R++ Sbjct: 192 AISRYGDEGIDLLMCDSTNATTPGISGSEADVAPTIKRLVMGAKQRVILASFASNVYRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A +G ++ F++ + ++++I TG Sbjct: 252 AAVDAAVAAGRKVAFNGRSMIRNMDIAQKLGYLQAPRGTFVTMDEAAKMAPHKIMLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D +I SS +PGNE A+ + N L + G V+ Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSR 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + VH SGH Y +L +Y RP + +HGE HL A+KELA+ G+ V +N Sbjct: 372 -DAKVHTSGHGYAGELLFIYNAARPVNAMPVHGEWRHLRANKELAISTGVDPERVVLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ L +++ ++ G DG +G + +A R +L G +++ ++DN Sbjct: 431 GVVVDLVDGRAQVVGQIPIGHLYVDGTTMGDVGEHVLADRTELGESGLIALTAVIDNRSG 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + + ++DL D + + + +R Sbjct: 491 RLLERPTVQARGFS---EDAKSMMPEIAELAENIMLDLAGEGENDTYRMVQQLRRRIRKY 547 Query: 538 LKKVWGKKPLVTVFINKIS 556 +K W + P++ + +++ Sbjct: 548 TEKKWQRSPMIVPTVVQMA 566 >gi|227503427|ref|ZP_03933476.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] gi|227075930|gb|EEI13893.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] Length = 584 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 180/556 (32%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L LGG+ EIG NM ++ YG + ++IDCGV FP PGVDL+ PD I Sbjct: 18 KDTLRIYALGGISEIGRNMTVFEYG----DELLIIDCGVLFPSSGEPGVDLILPDFGPIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K+ + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K + Sbjct: 74 KKIDKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPK--FV 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V G F + VNHS+P+ + +++ +P GNI+HTGD KLD + TD Sbjct: 132 EVNEKSDVTYGCFRVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I N ++ NAK V++ +F+S+V R++ Sbjct: 192 ALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFKRLVANAKQRVILASFASNVYRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A GRK+ G S+ R + +A +G +K + + + ++I TG Sbjct: 252 AAIDAAVANGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKTMLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + DT+IFSS IPGNE A+ + N L + G VI Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPGNEEAVFGVINMLSQIGANVITNQ 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +N Sbjct: 372 -DVKVHASGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVARDRTVLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ L E++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 431 GVVVDLRKGRAEVVGQLQVGHLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVIDNRTS 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + + V T+ DL D + + + + L Sbjct: 491 RLLEHPTVATTGFSDDDR---GVVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKL 547 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 548 MDSKYKREPVILPTIV 563 >gi|217967537|ref|YP_002353043.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] gi|217336636|gb|ACK42429.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] Length = 548 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 180/557 (32%), Positives = 292/557 (52%), Gaps = 14/557 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L +P+GG GEIG NM L YG I+ID G+ FP D+ G+D V PDI++++ Sbjct: 2 KHRLKVIPIGGFGEIGKNMLLLQYG----DSIIVIDAGLMFPDGDMLGIDFVIPDISYLL 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + A+ +TH HEDH GAL + L+VP+Y + +GL+E K R+ + I Sbjct: 58 ANKDKVKALILTHGHEDHIGALQYILKDLNVPIYGTSLTLGLVEKKLEEFRLKANLNKI- 116 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + +++G F+IE+ R HSIP+T+ L I +P+G IV +GD+KLD I G+ D + Sbjct: 117 -KPNETINIGPFTIETFRQTHSIPDTIGLAITTPIGLIVISGDFKLDQTPIDGNPPDFNK 175 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L +G G+LAL CDSTN + G SE +K I + K + + TF+S+ RI+ Sbjct: 176 LVELGERGVLALFCDSTNVEQPGITPSESLVKSTFEGIFSSTKSRIFLVTFASNFHRIQQ 235 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ID+A + GRK+ + G SL + VA +G + + + ++ + P E+++V+ TGS Sbjct: 236 AIDMALKFGRKVAIAGKSLINNIEVATKLGYLHIPENILINIKDVNNLPDEKVLVLTTGS 295 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL+ L+ + + L DTVI S++ IPGNE+ + + ++L +GV VI Sbjct: 296 QGEPYSALSLLTNHSYKQLFLKPGDTVILSTKPIPGNEIMVYKMVDQLFRKGVEVIYGK- 354 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VHVSGH ++K ++P+ L+ HGE HL K++ L+ GI + + NG Sbjct: 355 DAGVHVSGHAAQEEIKMFINLLKPKYLIPYHGEYRHLALLKKIGLELGISKEHIIIIENG 414 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + I + DG IG ++ + +R++L+ G L V VL+D Sbjct: 415 TVLEFDEEKAIINGRINLNNIYVDGLSIGDIGNIVLMERKKLAEDGVLIVGVLVDGETGL 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I PEI+ G + + ++ + + V K + L + Sbjct: 475 ILEGPEIISKGF-IFVKESEELIETAKEKVREAFKKKVGRNGGINK--ETLVREVLENFF 531 Query: 539 KKVWGKKPLVTVFINKI 555 + +KP+V + +I Sbjct: 532 NEELKRKPVVVPLVWEI 548 >gi|194014955|ref|ZP_03053572.1| metallo beta lactamase [Bacillus pumilus ATCC 7061] gi|194013981|gb|EDW23546.1| metallo beta lactamase [Bacillus pumilus ATCC 7061] Length = 555 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 157/562 (27%), Positives = 282/562 (50%), Gaps = 14/562 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK E + + LGGVGEIG N+ + ++D G+ P++++ G+D+V PD Sbjct: 1 MKKKNTENVRIIALGGVGEIGKNLYVIEI----DSDIYVVDAGLMHPENEMLGIDVVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+++ + + AIF+TH H++ G + S L VPVY + + LL K ++K Sbjct: 57 ISYLTERADRVKAIFLTHGHDEAIGGVFHCLSKLSVPVYGTKLTLALLREKLKQYGFNQK 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 A + + R NHSIP+++ + ++ +G+IV TGD+K D L Sbjct: 117 ADLREVHAKSVITFETTKVSFFRTNHSIPDSVGISFKTSLGSIVCTGDFKFDQTPALNQA 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGN G+LAL+ DS NA + G SE ++ I + M NA+ V+V SS++ Sbjct: 177 CDIGEIAKIGNNGVLALLSDSANAEKPGYTPSEALVQDEISNAMYNAENRVIVAVSSSNI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +R++ II+ Q GRK+ + G ++ + +AI +G + ++LF+ + + ++V Sbjct: 237 NRVQQIINATNQNGRKLAVAGKNMMTTLQLAIKLGYVTADEELFVPVQEVKKMAKNDVVV 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + GS GEP +AL ++++ + + + + DTV+ +S +PG E+ + L G +V Sbjct: 297 LTAGSHGEPLAALTKMAKQNHKQLHIEKDDTVVIASTPLPGQELTYSKTVDFLTRSGAQV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I A+ VHVSGH +LK M ++P+ L+ ++GE AH +A + + + Sbjct: 357 IF--AQKRVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSRVAEEVGMKRSDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + G ++ ++I ++V G L DG +G ++ + RR LS G L V + LD Sbjct: 415 LIDKGDVVEFRGQNVKIGEKVHQGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLD 474 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + PEI+ G Y + ++ + V V + + + L++S+ Sbjct: 475 KQKKQLISGPEIITRGF-VYVRESEELIVKATEMVKGIVKEQTENSIVEWSTLKQSMRDV 533 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + +KP++ I ++ Sbjct: 534 LNQFLYEKTKRKPMIIPIIMEV 555 >gi|154148668|ref|YP_001407259.1| metallo-beta-lactamase family protein [Campylobacter hominis ATCC BAA-381] gi|153804677|gb|ABS51684.1| metallo-beta-lactamase family protein [Campylobacter hominis ATCC BAA-381] Length = 677 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 173/555 (31%), Positives = 297/555 (53%), Gaps = 10/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++ PLGG+GEIG NM ++ + I++D G+SFP +++ GVDLV PD +++ Sbjct: 126 SDSKIRITPLGGLGEIGSNMTVFE----TENSAIIVDVGMSFPNENMLGVDLVIPDFSYV 181 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 K ++ + AIFITHAHEDH GAL + + P+YA+P +G++ K + ++ Sbjct: 182 RKIKEKIKAIFITHAHEDHIGALPYFFKEFNYPIYATPLTLGMISNKFEEHELKAERNFF 241 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q G F +E + + HSI ++ AL I + G I+HTGD+K+D I G TD Sbjct: 242 RPIQKRKIYQAGDFGVEFIHITHSIIDSSALAITTKAGTIIHTGDFKIDHTPIDGYPTDL 301 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L LM DSTN+ REG SE + K I +KG V+++TFSS++ R+ Sbjct: 302 HRLAYYGEKGVLLLMSDSTNSHREGITKSEISVGKTFDSIFSQSKGRVIMSTFSSNLHRV 361 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ A + GRK+ ++G S++R + A+++G I+ ++F+ + +P ++++I T Sbjct: 362 YQAIERAVKFGRKVCVIGRSMERNLFTAMELGYIQIDKKIFIDADQVSKFPDNEILIITT 421 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + VK+ D +I S++AIPGNE ++ + N L++ G V + Sbjct: 422 GSQGETMSALYRMATDEHKYVKIKPGDQIIISAKAIPGNESSVSTVLNYLLKSGASVAYQ 481 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D +HVSGH D K M + I+P+ + +HGE H+V HKE A+ GI + + Sbjct: 482 DF-SEIHVSGHASIEDQKLMLRLIKPKFFLPVHGEYNHIVKHKETAMSCGIEERNIYLMN 540 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + ++ + V G D + + +D + R+ L+ G + + +D + Sbjct: 541 DGDQVEICEKYLKRVKTVKTGKVFIDNQVNKQISDDIVKHRQNLADAGMVVIIAQIDKNA 600 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + +V G+ + D K + ++ + ++ D L I A+R Sbjct: 601 KLLTQARVVSYGLVS-DKQNQIFAKDVEDVIVQFLANIKDEILVDHWTLETKIRQAVRKH 659 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 660 IFRKLKKYPTIVPVI 674 >gi|237752125|ref|ZP_04582605.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376367|gb|EEO26458.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 669 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 166/558 (29%), Positives = 295/558 (52%), Gaps = 11/558 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ++ P+GG+GEIG NM + + I+ID G+SFP + + GVD++ PD +++ Sbjct: 118 NAKVRITPIGGLGEIGGNMTIIE----TQNSAIIIDAGMSFPDESMHGVDILVPDFSYLE 173 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + ++ I ITHAHEDH GA+ L+ P+Y + +GL+ +K + K + Sbjct: 174 VIKDKIVGIIITHAHEDHIGAMPYLFKKYQFPIYGTALPLGLIGSKFDEHGLKKFRSLFR 233 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + + +G F IE + + HSI ++ AL I++ G I HTGD+K+D I G TD + Sbjct: 234 AVEKRKPMRIGEFEIEWIHITHSIVDSSALAIKTEAGLIFHTGDFKIDHTPIDGYPTDLN 293 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G +G+L L+ DSTN+ + G SE + + AKG V+++TFSS++ R+ Sbjct: 294 RIAHYGEQGVLLLLSDSTNSHKPGYTPSEASVGPAFDLLFSRAKGRVIMSTFSSNIHRVY 353 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + RK+ ++G S+++ + +A +G I+ +F+ Y E+++++ TG Sbjct: 354 QAIQHGIKYNRKVAVIGRSMEKNLEIARTLGYIELPQNIFIEAHEVAKYGDEEVLIVTTG 413 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ DT+I S++AIPGNE ++ +I N L + G +V +D Sbjct: 414 SQGETMSALYRMATDEHRHIKIKPTDTIILSAKAIPGNEGSVSNILNFLNKAGAKVYYQD 473 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H SGH + K M + ++P+ + +HGE H++ HKE A+ G+ + + + Sbjct: 474 F-SEIHTSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHILKHKETAVSCGVDERNIYLMED 532 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + + + + V G D + A+ I +R+ L+ G L ++V + N Sbjct: 533 GDQMEIAHNFLRKVRSVKTGKTYIDNQVNTAIANDVILERQDLAENGILIISVDFNKEKN 592 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I G P I +GI A + + +K + + + + K + + +ALR L Sbjct: 593 SIIGKPRIQTMGIIA-NKETQAFNKEIEEFFTLFSKNCKKELYNSQKAMENELRNALRKL 651 Query: 538 LKKVWGKKPLVTVFINKI 555 + K K P + + I Sbjct: 652 MFKKTKKYPTIFPMVTLI 669 >gi|260494164|ref|ZP_05814295.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_33] gi|260198310|gb|EEW95826.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_33] Length = 608 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 55 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 110 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 111 NKSKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSKFENFGVKKDLPKM 170 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 171 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 230 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 231 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 290 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 291 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDEIVILC 350 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 351 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 410 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 411 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 469 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 470 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 529 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 530 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLGKKISKNETYLGRDWADLKGNVRDLLS 588 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 589 RFFYEKLKRNPIILPMLLEI 608 >gi|152993937|ref|YP_001359658.1| hypothetical protein SUN_2365 [Sulfurovum sp. NBC37-1] gi|151425798|dbj|BAF73301.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 701 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 161/556 (28%), Positives = 286/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F PLGG+GEIG NMA+ + I+ID G+SFP + + GVD++ PD +++ Sbjct: 149 SKGKVRFTPLGGLGEIGGNMAVLE----TESTAIVIDVGMSFPDETMHGVDILVPDFSYL 204 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + I ITH HEDH GA+ L+ L PVY +P A+ ++E K + Sbjct: 205 HAIKDKIKGIVITHGHEDHIGAMPYLFKELKFPVYGTPLALAMIENKFNEHGLKADAKYF 264 Query: 122 SF-QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +F + +G IE + HSI + +L I +P G ++HT D+K+D + G D Sbjct: 265 NFVTKRKQYTIGDMKIEWMHNTHSIIDACSLAIETPAGTLIHTADFKVDHTPVDGYTMDL 324 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G++G+L L DSTN+ G SE + K + + AKG V+++TFSS+V RI Sbjct: 325 QRYAYYGSKGVLCLFSDSTNSHNPGFTKSETVVGKTFDSLFEMAKGRVIMSTFSSNVHRI 384 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ++ + GRKI ++G S++R V +G + +D+ F+ Y +++++ T Sbjct: 385 FQAMERGVKHGRKICVIGRSMERNVETNRALGFVDIEDKHFIEVHEVPKYADHEVLIVTT 444 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL +++ E R++KL DTVI S+ AIPGNE ++ + N LV+ GV V Sbjct: 445 GSQGETMAALNRMATDEHRHIKLKPSDTVIISASAIPGNEASVSKLMNLLVKAGVTVRYR 504 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + +HVSGH + K + + ++P+ + +HGE H+ H + A+ G+ + + Sbjct: 505 EF-SDIHVSGHAAQEEQKLILRLVQPKFFLPVHGEYNHIAKHAKTAVSCGVDERNILLMS 563 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNH 476 +G + + P ++ + V G D + + R++L+ G +++ + ++ Sbjct: 564 DGDQVEITPKYLKKVKTVKSGKTYIDNQNNMTIENDVVLDRQKLAEDGIVTIVAQIAQSN 623 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + G P + G+ D + K K + + T ++++ KD + I +A+R Sbjct: 624 GKMVGKPVVYTHGL-VPDKEDKKFAKEIEVLLETMLLNMKGEGLKDHIHVENEIRNAVRK 682 Query: 537 LLKKVWGKKPLVTVFI 552 + + + PL+ + Sbjct: 683 HVIRSKKRYPLIIPTV 698 >gi|260101764|ref|ZP_05752001.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|260084408|gb|EEW68528.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] Length = 559 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 163/561 (29%), Positives = 289/561 (51%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ +GG+ EIG NM Y + I++DCG+ FP+DDL G++ V D ++ Sbjct: 3 IKNNEVAVYAIGGLHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSY 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++K RK + A+ ++H HEDH G + L + +PVYA+PFA+ L+ K + K Sbjct: 59 LIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTE 118 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-T 178 + S+ R HSI +T+ + + +P+G +V TGD+K D ++ Sbjct: 119 LHEEHEDTVLKFKKLSVSFFRTTHSIHDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAP 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G EG+LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ Sbjct: 179 DFQKMAQLGKEGVLALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLY 238 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVI 297 R+ + I A IGRK+ + G S++ V+ ID+G + L ++ E P ++++++ Sbjct: 239 RVSTAIQAAIDIGRKVAIFGRSMENGVANGIDLGYLNVPRDLIVNAEEINKLPPDKVMIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI Sbjct: 299 CTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVI 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 VH SGH +LK M + +P+ ++ +HGE V H +LA + G+ Sbjct: 359 HGRVN-NVHTSGHGGQEELKMMVRLSKPKYMIPVHGEYRMQVIHTQLAQEAGVPAENTFV 417 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG+++ P+ I + D ++ + R+ LS G + +D Sbjct: 418 LSNGEVVCFGPNGARIAGRIPADDVYVDTSGTADVGNVVVHDRQILSDEGLVVAVATVDY 477 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 H + P+I+ G Y + ++ K V + + + + + ++++IS Sbjct: 478 KHKRVLAGPDILSRGF-VYMRESTELINQAQKHVYHVLRNEMAKSDKPKESDIKKAISEN 536 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 L L ++P++ I + Sbjct: 537 LSDFLYSKTERRPMILPIIIE 557 >gi|126736042|ref|ZP_01751786.1| metallo-beta-lactamase family protein [Roseobacter sp. CCS2] gi|126714599|gb|EBA11466.1| metallo-beta-lactamase family protein [Roseobacter sp. CCS2] Length = 554 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 191/554 (34%), Positives = 311/554 (56%), Gaps = 3/554 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFI 61 ++ L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+ PDI ++ Sbjct: 2 SDRLIYLPLGGAGEIGMNAYVYGYGEPGKERLIVVDLGVTFPDMDGTPGVDLILPDIAWL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + IFITHAHEDH GA+ W L PVYA PF + K + + + Sbjct: 62 RARKAQIEGIFITHAHEDHVGAIGHYWEQLGAPVYARPFTANIARRKLDEHGHPESVVKV 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G ++ + ++HSIPE+ L+I +P G ++H+GD+K+D+ ++GD ++ Sbjct: 122 VGVYPEMIKCGPLTVSYLPISHSIPESAGLLIDTPEGRVLHSGDFKIDETPVVGDPWNEA 181 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G+ AL+CDSTN SE I I D+MK A+G V+ TTF+S+++R++ Sbjct: 182 LWEEVSKDGVKALICDSTNVFSREPGRSEATIGDAITDMMKEAQGMVVATTFASNIARLK 241 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ A++ R +VLLG +++R+V A +VGI+K +S E PRE ++++ TGS Sbjct: 242 TLAIAAQKADRSVVLLGRAMRRMVEAATEVGILKGFPSVVSPEDALQMPRENVMLLVTGS 301 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+A AQL++G +KL + DT +FSS+ IPGNE + I N+L E GV VI + Sbjct: 302 QGERRAASAQLAQGNYMGIKLKDGDTFLFSSKTIPGNERGVIRIMNQLSELGVDVIDDAG 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 HVSGH DL+R++Q +PQ L+ +HGE HL H ++ G++ + NG M Sbjct: 362 -GKYHVSGHANRPDLERLHQITKPQTLIPMHGEHRHLREHVKVGKSAGLSGI-VAVNGMM 419 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + L + + + + G DG + D + R +++ GHL V +++D + G Sbjct: 420 IDLSGNQPTVAEYIETGRTYLDGSVQIGALDGVVRDRIRMALNGHLIVTLIIDENDEPLG 479 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G+ + + +++ + + V +D L + + S R + Sbjct: 480 DPWVEASGLAETGRNNAALVEVVEEDLSQFVNRANAKTLRDDVKLEKELKSIARRSAQGE 539 Query: 542 WGKKPLVTVFINKI 555 GKKP VTV ++++ Sbjct: 540 IGKKPEVTVIVSRL 553 >gi|134102345|ref|YP_001108006.1| metallo-beta-lactamase family hydrolase [Saccharopolyspora erythraea NRRL 2338] gi|291003692|ref|ZP_06561665.1| metallo-beta-lactamase family hydrolase [Saccharopolyspora erythraea NRRL 2338] gi|133914968|emb|CAM05081.1| putative hydrolase of the metallo-beta-lactamase superfamily [Saccharopolyspora erythraea NRRL 2338] Length = 574 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 287/555 (51%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GE+G NM ++ + + +++DCGV FP+DD PGVDL+ PD I Sbjct: 29 LRVFALGGIGEVGRNMTVFEHA----GRLLVVDCGVLFPEDDAPGVDLILPDFAPIENRL 84 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + LL AK R+S + + Sbjct: 85 DDIEALVLTHGHEDHIGAVPFLLRLRPDLPVVGSKFTLALLAAKCKEHRLSPTL--VEVA 142 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G GAF +E VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 143 EGQHSTHGAFDLEFFAVNHSIPDALAVAIRTPAGVVLHTGDIKLDQLPLDGRLTDLAGFS 202 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I+ + ++ A ++V F+S V R++ ++ Sbjct: 203 RLGDEGVDLFLVDSTNAEVPGFVTPEREIRPVLDRVIGKATQRLIVACFASHVHRVQQVL 262 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA-TGSQG 303 D+A + GRK+ +G S+ R + +A ++G+++ + + L E L+V TGSQG Sbjct: 263 DVAVEHGRKVCFVGRSMVRNMGIASELGLLQVPDGLIVELDEALAMPEHLVVFVSTGSQG 322 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RGE + +++ DTV+ +S IPGNE A+ + N LV G V+ + Sbjct: 323 EPLSALSRMARGEHKQIRIRAGDTVVLASSLIPGNETAVFGVVNGLVRLGADVVHQGG-A 381 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L +Y +RP ++ +HGE HL A+ ELA G+A V +G + Sbjct: 382 KVHVSGHASAGELLYLYNAVRPSNVMPVHGEWRHLRANGELARLTGVAPERVVIAEDGVV 441 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + + +I+ G DG +G + ++ R L G +S+NV ++ + Sbjct: 442 VDMVDGIADIVGRFEVGHVYVDGLSVGDVGESTLSDRLILGEGGFISINVAVEASTGRAV 501 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I G D K ++ V + D + +++ + + Sbjct: 502 SSPKISGRGFS----DDPKALDEVVPLVEMELARTESEGITDTHRIAQAVRRVVGKWVAD 557 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 558 TYRRRPMIVPNVLPV 572 >gi|262277285|ref|ZP_06055078.1| ribonuclease J 1 (RNase J1) [alpha proteobacterium HIMB114] gi|262224388|gb|EEY74847.1| ribonuclease J 1 (RNase J1) [alpha proteobacterium HIMB114] Length = 555 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 195/554 (35%), Positives = 320/554 (57%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 EE++F PLGG GEIG NM LYG+G P++ KW+M+DCG++F ++ +PG+D++ PD FI Sbjct: 3 SKEEILFCPLGGSGEIGANMNLYGFGEPNNHKWLMVDCGITFAEESVPGIDVIIPDPDFI 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + R N + I ITH HEDH GAL +W L +YA+PF L+ K +R++ Sbjct: 63 YQNRNNCVGIIITHGHEDHIGALTHVWPNLKTNIYATPFTGALIREKFKEKRINIDEYLK 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +++ I+ V + HSI E AL+I I HTGDWK D + ++G ++ Sbjct: 123 IIPLNGNINLEFLKIDLVSLTHSILEPNALLIEYKGKKIFHTGDWKCDLNPMMGSNINEK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++GILA++CDSTN EG SEK +K+++ I + + ++VTTF+S+ +R++ Sbjct: 183 KLKEIGDKGILAMICDSTNIFTEGRSGSEKDVKESMLRIFEKQQKRIIVTTFASNAARMQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ AE++GR + L+G S+ R+ + A G + L PRE+++ + TGS Sbjct: 243 TVFQCAEKVGRHVSLVGRSMYRIFNTAKSCGYFSDIKPPLDPRDTKQMPREKIVYLCTGS 302 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP+ A+ ++ ++ +A+ DTVIFSSR IPGNE + + N LV +G+ VI+E+ Sbjct: 303 QGEPKGAMNRICNETHPDINIAQDDTVIFSSRIIPGNEKKLYLMHNILVRRGINVISEE- 361 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +HVSGHP ++ MY WIRP++ V +HGE HL H A ++ I + NG + Sbjct: 362 NAFIHVSGHPGREEMHEMYDWIRPEISVPVHGEHRHLKEHNLFAKEKKIKQPMLIENGDV 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 LR+FP+ EII++V G L DG + + +R+ +S+ G + +N+++ + N+ Sbjct: 422 LRIFPNKAEIINKVNSGKLLVDGNRLVDEESPALKERKNISYNGLMDINLIISRNGNVER 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I G+P +D + +I L ++ +K L +++ ++LR +L+ Sbjct: 482 SPLINLRGLPLHDQELNEIKYELEDKILDICRSYSLNNKKQENNLIDNLKNSLRKILQSR 541 Query: 542 WGKKPLVTVFINKI 555 KKP + + ++ Sbjct: 542 LSKKPFTNINLIRL 555 >gi|139439614|ref|ZP_01773027.1| Hypothetical protein COLAER_02054 [Collinsella aerofaciens ATCC 25986] gi|133774955|gb|EBA38775.1| Hypothetical protein COLAER_02054 [Collinsella aerofaciens ATCC 25986] Length = 556 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 168/560 (30%), Positives = 284/560 (50%), Gaps = 14/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +PLGG+ IG NM ++ G +++D G+ FP D PG+DLV PD T++ Sbjct: 5 KSSPLKIIPLGGLDGIGKNMTVFECG----DDMVLVDAGLMFPDDSQPGIDLVLPDYTYV 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + L I +TH HEDH G+L L L+ VP+++S +G +E K R+ Sbjct: 61 LENEEKLRGIVVTHGHEDHTGSLPYLLQDLNNKVPIFSSKLTLGFIEGKLSEFRIRA-PK 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G V++G S++ + HSIP + + IR+ G ++HTGD+KLD I G D Sbjct: 120 FREVKGGSHVNLGGISLDFFSMTHSIPGALGVFIRTNQGTVMHTGDFKLDQTPIDGVTPD 179 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++ +GI L+ DSTNA G SE + N+ +KNA G V V +FSS + R Sbjct: 180 YAAISRFAKQGIDLLLSDSTNATVPGFTKSEAEVGPNLLHAIKNAPGRVFVASFSSHIHR 239 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ I D A + GRK+V+ G S+ VA ++G + D + P ++++V+ Sbjct: 240 LQQICDAARKCGRKVVVTGRSMLTNTRVARELGYLNIDDADIIDAFDIDNLPDDKIVVMC 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ GE + + + E DTVI S+ +PGNE A+ + N L + G V Sbjct: 300 TGSQGEPLSALSRMANGEHKTLSIHEGDTVILSATPVPGNEKAVQQVVNSLAKLGCDVW- 358 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VHVSGH +LK + +P + +HGE +HL AH +LA + GI + + Sbjct: 359 DKNRALVHVSGHGSQEELKLLMAMAKPTYFMPVHGEAVHLRAHAQLARKMGIKDDHIFIL 418 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L + ++ V G+ DG IG + + R++L+ G ++ ++ Sbjct: 419 DNGDTLEMRGGIVKRGTPVESGVVYVDGLRIGDTDPIVLRDRQKLANDGMVTAVAIVSLK 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLP-QFRRKDLKLLRESISSALR 535 + E G+ D + +++ T+ F +R+++ +L Sbjct: 479 HKKIEAIEFSGRGVSFAIDDQ--FSEDASASIMKTIEKGKFSFTSSGSDAIRKAVRDSLS 536 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + +P++ + ++ Sbjct: 537 NFIWSRTRTRPMIIPVVMEV 556 >gi|295706228|ref|YP_003599303.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] gi|294803887|gb|ADF40953.1| Metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] Length = 555 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 147/558 (26%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E + LGGVGE+G NM + + ++D G FP ++ G+D+V PDIT++ Sbjct: 5 KTENIKISALGGVGELGKNMYVVEI----NENIYVLDAGSKFPGGEMLGIDIVIPDITYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++N+ IF+TH HE+ GA+ + L VPVY + + L++ K + K Sbjct: 61 VENQQNVKGIFVTHGHEEQIGAIPFILQKLDVPVYGTELTLALIKEKLKEYGIKKYEALH 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + I R HSI +++ + +++ G IV+TGD+K D +++ D Sbjct: 121 PITSSTVLSFEGVDISFFRTQHSIQDSVGICLQTNQGAIVYTGDFKFDQNSVSIQSADIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + AIG +G+L L+ DSTNA + G +SE I +NI D +KG ++V +SS++ RI+ Sbjct: 181 KMAAIGEQGVLCLLSDSTNADKPGYTVSEAVIGQNITDAFYKSKGRIIVAAYSSNLHRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II A Q GR ++++ ++ +++ +A +G ++ + L + + P + +++ TG Sbjct: 241 QIIHAAYQHGRNLIVMEKNMLKIIDIAAKLGHLQLPEDLIVPVQKLKDLPEHETVILTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP L ++++ +++++ + DTV+ ++ + G+E + + G V+ Sbjct: 301 HHGEPILGLTRMAKQSHKSIQIKQDDTVLLAATPVAGHETTFSKTIDVIFRLGASVVF-- 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 A+ V SGH +LK M +P+ ++ ++GE A+ +LA Q GI + + Sbjct: 359 AQKKVQASGHGSQEELKFMINLTKPKYVMPVNGEYRKQKAYAKLAGQLGISEDHICLLEK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+ + + + G L DG +G ++ + RR LS G L+V V ++ Sbjct: 419 GERVEFKDARMYPSGSIQAGNTLIDGLGVGDIGNIVLRDRRLLSQDGILTVVVTINKRQK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PEI+ G Y + K+ + K V + + + + L+ + +L Sbjct: 479 TVVAGPEIISRGF-VYVRESEKLLEEATKIVQQILEKCMEDKVIEWSSLKLKMRESLNQF 537 Query: 538 LKKVWGKKPLVTVFINKI 555 L + +KP++ I +I Sbjct: 538 LYEKTRRKPMILPIIMEI 555 >gi|307293254|ref|ZP_07573100.1| RNA-metabolising metallo-beta-lactamase [Sphingobium chlorophenolicum L-1] gi|306881320|gb|EFN12536.1| RNA-metabolising metallo-beta-lactamase [Sphingobium chlorophenolicum L-1] Length = 545 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 208/551 (37%), Positives = 318/551 (57%), Gaps = 11/551 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL+FL LGG GEIGMN+ LYG KW+M+D G++F PGVDL+ PD+ FI + Sbjct: 5 NELIFLALGGSGEIGMNVNLYG----CQGKWVMVDLGLTFADPAYPGVDLILPDLAFIEE 60 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + +L+ I +TH HEDH GA+ L + L VP+YA+PF GL+ K E +SK++ Sbjct: 61 RKDDLLGIVLTHGHEDHIGAIPYLAADLGVPLYATPFTAGLIRLKLEEEGLSKEVELNVI 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +G F V + HSIPE A++I +P G + HTGDWKLDD +LG + + L Sbjct: 121 DNEGSFALGPFGFRYVPLAHSIPEGNAVLIDTPYGKVFHTGDWKLDDTPLLGQPSTPEEL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG+EG+LAL+CDSTN SE +++ + + +K AKG VLVTTF+S+ +R++++ Sbjct: 181 TAIGDEGVLALVCDSTNVFNPEASGSEGDVREGLMETIKGAKGRVLVTTFASNAARLQTL 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A +GRK+ + G SL R++S A G +K + + P ++++IATG QG Sbjct: 241 GEVANAVGRKLCVAGRSLDRIISTARTAGYLKDFPPTVDWDDAMALPHNEVMIIATGGQG 300 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+AL++++ +KL E D V+FSS+ IPGNE+AIG I+N L +GV ++ + + Sbjct: 301 EARAALSRIAFDSHP-IKLDEGDLVVFSSKQIPGNEIAIGRIQNALAAKGVLMVTDR-QA 358 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP +L+ MY+W+RPQ+L+ +HGE H+ L L G+ NG MLR Sbjct: 359 EVHVSGHPGRPELQAMYRWVRPQILLPVHGERRHMAEQARLGLASGVPSAVVQSNGDMLR 418 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P+ +II G + DG +I + +RR+++ G +SV V +D + G P Sbjct: 419 LAPNGPQIIGHESTGRLVLDGDVILPADGSTMNERRKVALHGQISVAVAMDGKGRVIGTP 478 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+P + + + + +D + LRE + A+R + G Sbjct: 479 ALRTQGVPVEEDKAAFLEEAAEEAASAV-----TKGSRDEEALRERVRLAVRRTATRWTG 533 Query: 544 KKPLVTVFINK 554 KKP+V V + + Sbjct: 534 KKPVVDVLLIQ 544 >gi|315604460|ref|ZP_07879526.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314166|gb|EFU62217.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 180 str. F0310] Length = 580 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 169/560 (30%), Positives = 297/560 (53%), Gaps = 16/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L +PLGG+GE+G NM + Y K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 30 LEEGALRVIPLGGLGEVGRNMNVLEY----RGKLLVVDCGVLFPEESQPGVDLILPDFSW 85 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ + +TH HEDH GA+ L +P+Y S + + K R+S Sbjct: 86 IEDRMDDVVGMVLTHGHEDHIGAVPYLLKLRGDIPLYGSDLTLAFVAPKLREHRLSDPGF 145 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD+++VG F +E V V HSIP+ +A+ +R+ GN++ TGD+K+D + +TD Sbjct: 146 TVV-AEGDRLNVGPFDLEFVSVTHSIPDALAVFVRTRAGNVLITGDFKMDQLPLDRRLTD 204 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVS 238 + +G EG+ M DSTNA+ G E+ I + + A+ G ++V +F+S V Sbjct: 205 LRAFARMGEEGVDLFMVDSTNALVPGFITPEREIGPVLDQVFGEAEGGQIVVASFASHVH 264 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ +I+ A GR++ +G S++R + +A + G + D + + + G PR Q + + Sbjct: 265 RVQQVINAAAHHGRRVAFVGRSMERNMRIAEEKGYLSIPDGVIVDLKDIGDLPRSQRVYM 324 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 ATGSQGEP +AL+++S G R V + D V+ +S IPGNE ++ + N L G RV+ Sbjct: 325 ATGSQGEPMAALSRMSVGSHRTVSIEPGDMVVLASSLIPGNENSVYRVINDLTRLGARVV 384 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +++ VHVSGH +L Y I+P+ ++ IHGE HLV + +LA++ GI V Sbjct: 385 SKE-NAKVHVSGHASAGELIYCYNIIQPRNVMPIHGEVRHLVGNGQLAVKTGIDPRHVVL 443 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 +G + L + V DG IG+ ++ +A RR L G +S+ +++ Sbjct: 444 AEDGVTVDLKDGVARVSGVVPCEYVYVDGRSIGEISEDELATRRTLGSEGFISIFAVVER 503 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + PEI IG + + + +L V + + +D +L++++ + Sbjct: 504 DSGTVLAGPEIRAIG----MAEDDDVFEEILPDVTQALKEAAAPGGQDPYVLQQAMRRVI 559 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 560 GRWVARRLRRRPMIVPVVTE 579 >gi|294677077|ref|YP_003577692.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] gi|294475897|gb|ADE85285.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] Length = 558 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 196/556 (35%), Positives = 307/556 (55%), Gaps = 5/556 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFI 61 +E L++LPLGG GE+GMN +YGYG + I++D GV+FP D PGVDL+ D ++ Sbjct: 2 SERLIYLPLGGAGEVGMNAYVYGYGPEGKERLIVVDLGVTFPDMDGSPGVDLIMADTAWL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + AIF+TH HEDH GA+ LW L PV+A F L+ K ++ + + Sbjct: 62 EANVNRIDAIFLTHGHEDHIGAMPHLWPKLRAPVFARRFTAALVAIKMEEAGLASDMIRV 121 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +DVG F ++ V V+HSIPE+ AL+I +P G +VHTGD+KLD + ++G+ D Sbjct: 122 VEPRPKAIDVGPFRVQFVPVSHSIPESSALIIDTPAGRVVHTGDFKLDGNPVVGEPFDPL 181 Query: 182 SLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 I NE GI L CDSTN SE + + D + KG V+ TTF+S+V+R Sbjct: 182 EWHEIANEGAGIKVLCCDSTNVFTHNPGRSESTLVAPLRDFIAAQKGMVVTTTFASNVAR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + GR + LLG +++++V VA + ++K + E PR+ L++I T Sbjct: 242 LKTLAEAGRAAGRSVCLLGRAMRKMVQVAEEANVLKGFPGTIQPEEAVDVPRQNLMLIVT 301 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ + + E DT +FSS+ IPGNE + I N E GV V+ + Sbjct: 302 GSQGERRAATAQLSRGKYLGLSMKEGDTFLFSSKVIPGNERGVIKIMNAFSEMGVDVVDD 361 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 HVSGH DL ++ +RPQ+L+ +HGE HL H ++A +GIA NG Sbjct: 362 RG-GLYHVSGHANRPDLDAVHDLLRPQILIPMHGEHRHLREHAKIAQSKGIA-TEIATNG 419 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ML L ++++ + G DG ++ D + +R +++ GH+ + V++D Sbjct: 420 TMLDLTGPAPKVVEYIETGRLYLDGTVLIGALDGVVRERIRMALNGHVLITVIIDEDDVP 479 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G + +G+P GG + K++ + + P+ +D L E++ R + Sbjct: 480 LGDAWVELMGLPERGKSGGDMMKIIEDELSAFLESAPEKIVRDDDKLDEALRRIARQVAM 539 Query: 540 KVWGKKPLVTVFINKI 555 + GKKP VTV ++++ Sbjct: 540 EEIGKKPEVTVVVSRL 555 >gi|114800376|ref|YP_760465.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] gi|114740550|gb|ABI78675.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] Length = 565 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 216/557 (38%), Positives = 325/557 (58%), Gaps = 7/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +ELVFLPLGG GEIGMN+ YGYG P++R+WI++D GV+F D PG+DL+ D ++ Sbjct: 11 SKDELVFLPLGGCGEIGMNLNAYGYGPPNARRWIIVDVGVTFGNSDTPGIDLICADPDYL 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +++ A+F+THAHEDH GA+ L+ P+YA+PF L+ +K V +K Sbjct: 71 I--GEHIDAVFLTHAHEDHIGAVGLLYPMLKTKAPIYATPFTCELVRSKMDERGVDQKWL 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G V G F + V + HSIPE AL IR+P G ++HTGDWK+D +G TD Sbjct: 129 -KTISMGGTVKAGPFEVTYVTLTHSIPEPNALAIRTPAGIVLHTGDWKIDPQPQIGSSTD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L A+G+EG+LA++CDSTN G SE+ +++ + +++ V VTTF+S+V+R Sbjct: 188 ISGLTALGDEGVLAMVCDSTNVFEGGEAGSEETVRQGLIELIAEQTQAVAVTTFASNVAR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++SIID A Q GR + L+G S+ RV + A VGI+ F+ + G P E ++ + T Sbjct: 248 VKSIIDAANQAGRSVCLVGRSMHRVTAAAKAVGILPARLDFVDESEAGYLPAENILYLCT 307 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++RG+ R+V L E D+VIFSSR IPGNE ++ ++N L E G++VI Sbjct: 308 GSQGEANAALSRIARGDHRHVALREGDSVIFSSRLIPGNETSVYSLQNTLAENGIKVITP 367 Query: 360 DAE-CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +HVSGHP ++L+RMYQW+RP++ V +HGE H++ H A + RN Sbjct: 368 RMVPQTIHVSGHPCRDELRRMYQWVRPRISVPVHGERRHILEHASYARSLQVPEAIAPRN 427 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++RL P EI+DEV G DG + G+ +R++L G + V LD Sbjct: 428 GSLIRLAPGEAEILDEVPAGRLFLDGNRLVPEGAQGLVERKRLHNSGVIFATVSLDQAGR 487 Query: 479 IFGVPEIVDIGIPAYD-GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P +V G+ D + ++L + V L + R D + + SI ALR Sbjct: 488 PVDGPVVVAKGLSEKDGRVAEESLEILDEAAEAAVAGLSKKDRNDDEAIERSIGRALRKA 547 Query: 538 LKKVWGKKPLVTVFINK 554 +G KP++ V + + Sbjct: 548 CDVNFGLKPVIEVVVLR 564 >gi|308233973|ref|ZP_07664710.1| RNA-metabolising metallo-beta-lactamase [Atopobium vaginae DSM 15829] gi|328944018|ref|ZP_08241483.1| metallo-beta-lactamase [Atopobium vaginae DSM 15829] gi|327491987|gb|EGF23761.1| metallo-beta-lactamase [Atopobium vaginae DSM 15829] Length = 552 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 180/559 (32%), Positives = 289/559 (51%), Gaps = 15/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + L +PLGG+ IG NM + G I+IDCG+ FP D+ PG+DLV PD T+I Sbjct: 4 KTKALKIIPLGGLDGIGKNMTAFECG----DDLIVIDCGLMFPDDNQPGIDLVLPDYTYI 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L I ITH HEDH GA+ L + L VP+Y+S ++G + AK +V Sbjct: 60 LEHADKLRGILITHGHEDHIGAIPYLLADLHRKVPIYSSKLSLGFINAKLAEHKVVSPKL 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 C + GD++ +G+F + + HSIP + + +++ G+ +HTGD+K D I G T+ Sbjct: 120 C-EVKNGDRIQLGSFEVNFFSITHSIPGALGMYVKTSAGSFLHTGDFKFDQTPIDGVTTN 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +++C EGI L+ DSTNA R G SE + ++ I+KNAKG V V +FSS + R Sbjct: 179 FNAICRFAEEGIDVLLADSTNATRPGFTPSESSVGPSLRHIIKNAKGRVFVASFSSHIHR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 I+ + D A +GRK+V+ G S+ +A D+G +K + P ++++V+ Sbjct: 239 IQQVCDAAVSVGRKVVVTGRSMITNTRIARDLGYLKISPNNIIDAFDLDTLPDDKIVVMC 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ G+ +++ + DTVI S+ +PGNE ++ + N L + G V Sbjct: 299 TGSQGEPMSALARMATGDHKSLTITASDTVIISATPVPGNEKSVQGVINLLSKTGCDV-Y 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + ++ VHVSGH +LK + P+ V +HGE +H H +LA + GI + Sbjct: 358 DRSKTLVHVSGHASQEELKLLLAMTHPRYFVPVHGEAVHQREHAKLAQKMGIKPDHIFIA 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L L + D V G+ DG + + R++LS G + N Sbjct: 418 DNGDELILKNHKLSWGDPVNSGVIYVDGLSVTDANPVVFRDRQKLSRDGIFFCVATVTNQ 477 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + E+ G+ D I + L ++ V Q ++ ++ I AL Sbjct: 478 HKL-ADVELSCRGVSFNLDD---ISQEALNSIKNYVEVKAQHENVTIESYQQGIRRALSQ 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 LL +P++ + ++ Sbjct: 534 LLWSQTRTRPMIIPVVMEV 552 >gi|126659069|ref|ZP_01730209.1| hypothetical protein CY0110_04648 [Cyanothece sp. CCY0110] gi|126619597|gb|EAZ90326.1| hypothetical protein CY0110_04648 [Cyanothece sp. CCY0110] Length = 589 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 174/560 (31%), Positives = 300/560 (53%), Gaps = 20/560 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N + Y + + I+ID G++FP +++ GV++V PD+T++ Sbjct: 6 KQTNLKIIPLGGLHEIGKNTCVLEY----NDEIILIDAGIAFPTEEMHGVNIVLPDMTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + TH HEDH G + +P +Y AI LL K VS + Sbjct: 62 RENRHKIKGMIATHGHEDHIGGIPYHLKQFDIPKIYGPKLAISLLRDKLDEAGVSNRTKL 121 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V + F +E +R HSI ++ L I +P+G ++HTGD+K+D + G+ D Sbjct: 122 QTVSPREMVRISPSFLVEFIRNTHSIADSFTLAIHTPLGVVIHTGDFKVDHTPVDGEFFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G+ SE + N+ I+ A+ +++TTF+SSV R Sbjct: 182 FQKLAEHGEKGVLCLLSDSTNAEVPGSTPSESSVYPNLDRIISQAEARLMITTFASSVHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ +A++ RK+ ++G S+ V++ A ++G +K D LF+S ++ P EQ++++ Sbjct: 242 VNIILQLAQKHKRKVAVVGRSMLNVIAHARELGYLKCPDDLFVSLKAANNLPDEQVLILT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL ++SRG R++K+ DT++FS+ IPGN +A+ + +RL+ QG +VI Sbjct: 302 TGSQGETLAALTRISRGSHRHIKVRPGDTIVFSANPIPGNTIAVVNTIDRLMMQGAKVIY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH D K M RP+ V +HGE LV H E A + G+ + + Sbjct: 362 GRHHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVKHAETAYKMGVPAENIVII 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + D I + +V G+ L D + + + R+QL+ G ++V ++ Sbjct: 421 NNGDIVEVSDDSIGVAGKVPSGIELVDQAGV--VHEHVMEDRQQLAQDGVVTVAAAINWE 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-------LPQFRRKDLKLLRES 529 + PE+ G+ + + I +L+++ + + + D L+E Sbjct: 479 GKLLTPPEVDLRGVVSKV-EYSLIKQLIIRAIENVLENRWDEFASSNGKTEVDWDYLQEE 537 Query: 530 ISSALRSLLKKVWGKKPLVT 549 + + L+ L+K+ PLV Sbjct: 538 LENTLQRLVKRELRSYPLVI 557 >gi|118474645|ref|YP_892918.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] gi|118413871|gb|ABK82291.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] Length = 645 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 160/555 (28%), Positives = 291/555 (52%), Gaps = 10/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG NM ++ + I++D G+SFP + + GVD++ PD +I Sbjct: 94 SEHKIKITPLGGLGEIGGNMTVFE----TDNDAIIVDIGMSFPSESMHGVDILIPDFDYI 149 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 K ++ + I ITHAHEDH GA+ + P+YA+P +G++ K + + Sbjct: 150 RKIKQKVRGIIITHAHEDHIGAVPYFFKEFQFPIYATPLPLGMISNKFEEHGLKAHRSYF 209 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + ++G F IE + + HSI + ALVI + G I+HTGD+K+D I G TD Sbjct: 210 RPIEKRKLYEIGDFEIELIHITHSIIDASALVITTKAGTILHTGDFKIDHTPIDGYPTDL 269 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L G G+L ++ DSTN+ +EG SE + K I +KG V+++TFSS++ R+ Sbjct: 270 NRLAYYGERGVLCMLSDSTNSYKEGITKSESSVGKTFDAIFATSKGRVIMSTFSSNIHRV 329 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ + GRK+ ++G S++R + AI++G + ++F+ YP +++++ T Sbjct: 330 YQAIERGVKHGRKVCVIGRSMERNLWTAIELGYVNLDKKIFIDANEVSKYPDNEVLIVTT 389 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D +I SS+AIPGNE ++ + N L++ G V + Sbjct: 390 GSQGETMSALYRMATDEHKYIKIKPTDQIIISSKAIPGNETSVSTVLNYLLKSGASVAHQ 449 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D +HVSGH + K M + ++P+ + +HGE H+V HKE A+ G+ + Sbjct: 450 DF-SEIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHIVRHKETAIACGVDERNTYLMS 508 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + I+ + V G D + + +D + R++L+ G +++ +D + Sbjct: 509 DGDQIEVCQKYIKRLKTVKTGKVFIDNQINKQISDDVVIDRQKLAEAGVVTIISQIDKNA 568 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ G+ + + + K + + ++ + ++ D + L I +R Sbjct: 569 KTLIQNRVISYGLVS-ERQSKNLSKEMEEVLLQFLSNVKDELLHDQRALENQIRQVIRKH 627 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + + Sbjct: 628 IFRKIKKYPTIVPVV 642 >gi|297584092|ref|YP_003699872.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297142549|gb|ADH99306.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 556 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 286/557 (51%), Gaps = 10/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E++ F LGGVGE+G NM + + ++ID G P+DD+ GVD+V PD+T++ Sbjct: 5 QTEQIKFYALGGVGEVGKNMYVLE----LDDEMVIIDTGCMHPEDDMLGVDIVIPDMTYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ + I +T A +DH GAL + L+VPVY S F + L++ V K Sbjct: 61 IENKEKVKGIILTQALDDHIGALPYVLRELNVPVYGSRFTMALVKDLCNEVGVPGKQQFN 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + K+ +G + + N+S+P+T+ ++I + G I+HTGD+K D + + G ++ D Sbjct: 121 EVHSNSKIKIGKTPVSFFKTNYSVPDTLGVMIHTSQGPIIHTGDFKFDQNPVDGMPSEMD 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+L L+ DST A G SE + + + + A ++V+ FSS++ RI+ Sbjct: 181 KLTEIGSKGVLCLLSDSTGAEVPGYAPSESLVAEGLKESFHEAPESIIVSVFSSNIYRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 +++ AE+ RK+V++G ++R V +A+++G + + + +++ P ++ +V+ TG Sbjct: 241 QVLEAAEREERKVVVVGKEIERAVEIALELGYLDDLEGTLIDLKTYKKLPSDETVVVTTG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP S L ++++G + VK+ KD +I S+ PGNE + + + L G V+ Sbjct: 301 SQGEPMSCLMRMAKGSHQTVKIKSKDRIIISAVPSPGNEKQVSQMVDLLSRTGADVVYGK 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 + +HV H +LK + ++PQ + + GE VA LA GI + + Sbjct: 361 -DKKIHVPAHACQEELKLLLNVVQPQHFIPVAGEYRMQVAQHHLARSVGIQQDEIFLLDK 419 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G+ + + +V G L DG +G ++ + RR LS G L V V L+ H Sbjct: 420 GECVEFNKRKAKQTGKVPAGHVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKAHN 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+++ G Y + + + V T+ + D ++ I L L Sbjct: 480 KVLSGPDVISRGF-VYVRESEALIRQAETLVKETIDQQIAQNQTDWATMKSGIRDQLSKL 538 Query: 538 LKKVWGKKPLVTVFINK 554 L ++P++ I + Sbjct: 539 LFDKTKRRPMIMPIIME 555 >gi|227549068|ref|ZP_03979117.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] gi|227078850|gb|EEI16813.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] Length = 584 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 174/561 (31%), Positives = 293/561 (52%), Gaps = 15/561 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDLV PD I Sbjct: 18 NNGLRIYALGGISEIGRNMTVFEY----NGRLLVVDCGVLFPNSGEPGVDLVLPDFGPIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L VP+Y+S F L+ AK R K+ + Sbjct: 74 NKLDKIEALIVTHGHEDHIGAIPWLLKLRADVPIYSSRFTNALIAAKTKEHRQRPKLNDV 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + ++++G F I V HSIPE + + I++ G++V TGD KLD G TD Sbjct: 134 TKD--SELNLGPFRIRFWHVGHSIPECLGVSIKTGAGHVVMTGDIKLDQTPYDGQPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EGI MCDSTNA G SEKGI++N+ +++ AK V++++F+S+V+R++ Sbjct: 192 ALSRFGDEGIDLFMCDSTNATVPGISSSEKGIEENLTRLVQGAKQRVIISSFASNVARVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 ++ A GRK+ G S+ R + +A + +++ + E ++++I TG Sbjct: 252 MAVNAAVANGRKVAFNGRSMIRNMEIAEKMSLLRAPRGTIIPIEEAAKMAPHKVVLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL+++SR E R + + + D +I SS IPGNE A+ + N L + G VI Sbjct: 312 TQGEPMAALSRMSRREHRQITVRDGDLIILSSSLIPGNEEAVFAVINNLAQIGATVITN- 370 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE H+ A+KELA+ G+ +N Sbjct: 371 DDAHVHASGHGYAGELLFLYNAARPKGAMPVHGEWRHMRANKELAISTGVKPENTALAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + I ++ + G DG +G +A R L+ G +S+ ++D+ Sbjct: 431 GVVVDMVGGKINVVGQYQVGQLYVDGETMGDVDPDVLADRTSLASGGVVSITCVIDDRTG 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D D +K + + V T + DL D + + + + Sbjct: 491 RLLETPRVSTTGFSDDDRD---FNKKVAEGVETVMNDLAAQGENDPYRMVQQLRRHVSKA 547 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 +++ + ++P++ + ++ Sbjct: 548 IEQKYKREPVILPTVVPMAAD 568 >gi|224373782|ref|YP_002608154.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] gi|223590014|gb|ACM93750.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] Length = 609 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 163/555 (29%), Positives = 290/555 (52%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + F PLGG+ EIG N A+ + I+IDCG+SFP +D+ GVD++ PD +++ Sbjct: 58 KGWVRFTPLGGLDEIGGNCAVLE----TENSAIIIDCGMSFPNEDMHGVDILIPDFSYLR 113 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + R + + ITH HEDH GA+ L+ + P+Y + + ++E K ++ + K Sbjct: 114 EIRHKIKGLIITHGHEDHIGAVPYLFKEMQFPIYGTSLPLAMIENKFKEHKLLQYKSYFR 173 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + + +G F IE + + HSI ++ +L I++PVG I+HTGD+K+D I G D Sbjct: 174 SVKKRHPIQIGDFKIEWIHMTHSIIDSSSLAIQTPVGTIIHTGDFKIDHTPIDGYAPDLH 233 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 G +G+LAL DSTN+ + G SE + K D+ KG V+++TFSS++ R+ Sbjct: 234 RFAYYGEKGVLALFSDSTNSYKPGVTPSESVVGKTFDDLFLRTKGRVIMSTFSSNIHRVY 293 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + GRK+ ++G S+++ ++VA+D+G IK +F+ G Y +++++ TG Sbjct: 294 QAIATGIKYGRKVCIIGRSMEQNLNVAMDLGYIKLPRDIFIDPYEIGKYEDSEILIVTTG 353 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R+VK+ E D +I S++AIPGNE + + N L+++G +V +D Sbjct: 354 SQGESMSALYRMAIDEHRHVKIKEGDQIIISAKAIPGNEPTVSQLINFLMKKGAKVAYQD 413 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 +HVSGH + K M + ++P+ +HGE HL+ H+E A+ + + + Sbjct: 414 F-SEIHVSGHAAQEEQKLMLRLVKPKYFFPVHGEYNHLMKHRETAMSIGMSENNIFVMED 472 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G+ + P + + V G D + K + R++L+ G + + +D Sbjct: 473 GEQWEITPKRVRKVKSVKVGKIYIDNQINEKIETDIVLDRQKLANEGIIMIVAQVDKQKK 532 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + GI A D K + ++ + + + ++ + + +R Sbjct: 533 KLLSRPRVTTYGIIADKEDKN-FAKEMEDILVNYIDHAKDYVYEKTRIFENELRNVIRKH 591 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + + Sbjct: 592 VFRKTKKYPTIVPIV 606 >gi|328952536|ref|YP_004369870.1| Ribocuclease J [Desulfobacca acetoxidans DSM 11109] gi|328452860|gb|AEB08689.1| Ribocuclease J [Desulfobacca acetoxidans DSM 11109] Length = 566 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 285/555 (51%), Gaps = 10/555 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + + LGG+GEIG+N ++ +S +++D G+ FP+D + G+D+V PD +++ + Sbjct: 18 WVDLMFLGGLGEIGLNSMVFE----TSDHLVVVDAGIMFPEDYMLGIDMVIPDFSYLRER 73 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + A+ +TH HEDH GA+ L L++PVY +P + LL K + ++ Sbjct: 74 RDKIAALILTHGHEDHIGAVPFLLKELNLPVYGTPLTLALLREKLKEHHLLEQSELHLID 133 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++ VG F + V HSI + + + +PVG +H+GD+K+D G+VTD +S Sbjct: 134 PRRQLVVGPFVFNFIPVTHSIVDGVGFALTTPVGTFIHSGDFKIDATPTAGEVTDLNSFA 193 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 GN+G+LAL+ DSTNA R G +SE+ I + ++++ A G V+V FSS + R++ II Sbjct: 194 DYGNKGVLALLSDSTNAERPGYTLSERDIGCTLENLIREAPGRVIVAVFSSHIPRLQQII 253 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQG 303 IA + GRK++ G S+ V +A +G + + ++ P ++I++ TGSQG Sbjct: 254 AIAAKQGRKVLFHGRSMVTNVGLARQLGFLQMPPEQEMTTAQLKSLPDHEIIIVTTGSQG 313 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SALA+++ + +++ D VI SS+ IPGNE AI + N L G V+ + Sbjct: 314 EAMSALARIALDAHKQIRIRSGDLVILSSKFIPGNEKAISTVINNLYRLGAEVVYHEV-A 372 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RNGKM 421 +HVSGH +LK + Q +P+ L+ IHGE HLV H L G+ + NG Sbjct: 373 DIHVSGHASQEELKLLLQLTKPRYLIPIHGELRHLVKHARLGRSLGMIDAQLLLATNGDR 432 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 R + + + G DG +G ++ + R+ L+ G V +D + Sbjct: 433 FRFDVQGAQRLTRIEVGRIFVDGKGVGDVGNIVLRDRQHLAADGLFLALVAVDATSKRLI 492 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+++ G ++ + + + ++ + +D ++ I ALR K Sbjct: 493 SGPDLISKGF-VFEAEQSDMLDAAREIILEIISRALAEPTQDWLEIQIQIGKALRKYFFK 551 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ I + Sbjct: 552 LLERRPMILPLILTL 566 >gi|170780794|ref|YP_001709126.1| metallo-beta-lactamase family hydrolase [Clavibacter michiganensis subsp. sepedonicus] gi|169155362|emb|CAQ00466.1| putative hydrolase (metallo-beta-lactamase superfamily) [Clavibacter michiganensis subsp. sepedonicus] Length = 564 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 166/551 (30%), Positives = 286/551 (51%), Gaps = 15/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+G++G NM L+ Y + +++DCGV FP++ PG++++ PD + + Sbjct: 23 LRVTPLGGLGDVGRNMTLFEY----EGELLIVDCGVLFPEESQPGINVILPDFSTLRGRL 78 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + I +TH HEDH G + L +PV S + + AK ++ + + Sbjct: 79 DKITGIVLTHGHEDHIGGVPYLLQERPDIPVIGSRLTLAFISAKLEEHKIKPVTRQV--K 136 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD++D G F++E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 137 EGDRIDAGKFNLEFVAVNHSIPDGLAVAIRTGAGMVLHTGDFKMDQFPMDRRLTDLGAFA 196 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G +EK + I + + A ++V++F+S V RI+ ++ Sbjct: 197 RLGEEGVDLFLTDSTNAEVPGFTTAEKDLTPAIEKVFRTAPKRIVVSSFASHVHRIQQVL 256 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D AEQ GRK+ +G S+ R + +A D+G ++ L + ++ P +++ +I TGSQG Sbjct: 257 DSAEQYGRKVSFVGRSMVRNMKIASDLGYLRIPKGLVIDLKALNKLPDDKVTLICTGSQG 316 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++R E +++ E DT++ +S IPGNE AI + N L+ G V+ + Sbjct: 317 EPMAALSRMARREH-IIEVGEGDTILLASSLIPGNENAIYGVINGLIRWGADVVHKG-NA 374 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGH +L Y ++P+ ++ +HGE HLVA+ LA G+ + +G + Sbjct: 375 KVHVSGHASAGELVYCYNLVKPRNVLPVHGEWRHLVANAALAESTGVKNALVIEDGVSVD 434 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGV 482 L I V DG IG + + +RR L+ G ++V + D + Sbjct: 435 LVNGRASISGRVPAPYVFVDGMTIGVATEEALEERRTLAAEGQITVLGIFDEKEQKLIHP 494 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 E++ G + + T + + R D ++S L+ L++ Sbjct: 495 AELITRGFV----EHEGWIPEAEAAISTALKNAAAKRHLDGVAAERAMSDGLQRWLQRRH 550 Query: 543 GKKPLVTVFIN 553 + P+VTV + Sbjct: 551 RRTPVVTVIVV 561 >gi|148271351|ref|YP_001220912.1| hypothetical protein CMM_0172 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829281|emb|CAN00193.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 564 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 165/551 (29%), Positives = 284/551 (51%), Gaps = 15/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+G++G NM L+ Y + +++DCGV FP++ PG++++ PD + + Sbjct: 23 LRVTPLGGLGDVGRNMTLFEY----EGELLIVDCGVLFPEESQPGINVILPDFSTLRGRL 78 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + I +TH HEDH G + L +PV S + + AK ++ + + Sbjct: 79 DKITGIVLTHGHEDHIGGVPYLLQERPDIPVIGSRLTLAFISAKLEEHKIKPVTRQV--K 136 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD++ G F +E V VNHSIP+ +A+ IR+ G ++HTGD+K+D + +TD + Sbjct: 137 EGDRITAGKFDLEFVAVNHSIPDGLAVAIRTGAGMVLHTGDFKMDQFPMDRRLTDLGAFA 196 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G +EK + I + + A ++V++F+S V RI+ ++ Sbjct: 197 RLGEEGVDLFLTDSTNAEVPGFTTAEKDLTPAIEKVFRTAPKRIVVSSFASHVHRIQQVL 256 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D AEQ GRK+ +G S+ R + +A D+G ++ L + ++ P +++ +I TGSQG Sbjct: 257 DSAEQYGRKVSFVGRSMVRNMKIASDLGYLRIPKGLVIDLKALNKLPDDKVTLICTGSQG 316 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++R E +++ E DT++ +S IPGNE AI + N L+ G V+ + Sbjct: 317 EPMAALSRMARREH-IIEVGEGDTILLASSLIPGNENAIYGVINGLIRWGADVVHKG-NA 374 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGH +L Y ++P+ ++ +HGE HLVA+ LA G+ + +G + Sbjct: 375 KVHVSGHASAGELVYCYNLVKPRNVLPVHGEWRHLVANAALAESTGVKNALVIEDGVSVD 434 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGV 482 L I V DG IG + + +RR L+ G ++V + D + Sbjct: 435 LVNGRATISGRVPAPYVFVDGMTIGVATEEALEERRTLAAEGQITVLGIFDEKEQKLIHP 494 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 E++ G + + T + + R D ++S L+ L++ Sbjct: 495 AELITRGFV----EHDGWIPEAEAAISTALKNAAAKRHLDGVAAERAMSDGLQRWLQRRH 550 Query: 543 GKKPLVTVFIN 553 + P+VTV + Sbjct: 551 RRTPVVTVIVV 561 >gi|256847727|ref|ZP_05553172.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256715416|gb|EEU30392.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 614 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 167/565 (29%), Positives = 281/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + ++IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAVGGLGEIGKNMYCVQF----QDEIVIIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 62 LVENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRDAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 122 HEVDEFDTVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGNLPAPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+L L DSTNA R SE+ + +I + + KG ++ +F+S+V R Sbjct: 182 FQQMAKLGEEGVLLLTSDSTNAERPQFTKSERWVDIHIRRVFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R +D+A + GRKI + G S++ + +G +K ++ + YP E+++++ Sbjct: 242 LREAVDVALKQGRKIAVFGRSMENAIEAGQRLGYLKIPEKSLIDPNEINSYPPEEVMIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + DTV+FSS IPGN +++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGNHRQISIQPGDTVVFSSNPIPGNTISVNALINKLEEDGAEVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQIDEELMLRLMKPKFFAPVHGEFRMQKIHTKLAQLTGVPKDHCFIL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 +NG +L L D I D + G DG + + I +RR LS G ++ ++D Sbjct: 421 QNGDVLALTKDTCRIADHIDSMGDVYIDGRDVNDSVGNPEIRERRMLSEEGVVTAIAVID 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+IV G I + + D + + +I S Sbjct: 481 MKDKQIVAGPDIVSRGFVYMHESQELIKAANHEVFWALLNTFKNHAHADRRAINRTIVSR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL + G++P++ + ++ Sbjct: 541 LQKLLYQRTGRRPVIIPMVTILNDD 565 >gi|237742207|ref|ZP_04572688.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13] gi|229429855|gb|EEO40067.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13] Length = 610 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 283/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 57 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 112 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 113 NKSKIKGLFVTHGHEDHIGGIPYLYEKIEKDTIIYGGKLTNALIKSKFENFGVKKDLPKM 172 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 173 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 232 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 233 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 292 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 293 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDKIVILC 352 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 353 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 412 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH + A++ G+ + Sbjct: 413 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMKSAIETGVPKDKILLT 471 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 472 QNGDKIEVTREYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 531 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 532 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLDKKISKNETYLGRDWADLKGNVRDLLS 590 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 591 RFFYEKLKRNPIILPMLLEI 610 >gi|317126116|ref|YP_004100228.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] gi|315590204|gb|ADU49501.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] Length = 565 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 171/554 (30%), Positives = 285/554 (51%), Gaps = 18/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG NM ++ + + +++DCGV FP++ PGVD++ PD T+I Sbjct: 22 LRVVPLGGLGEIGRNMTVFEHA----GRLLIVDCGVLFPEEHQPGVDVILPDFTWIRDRL 77 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + AI +TH HEDH G + L +P+ S + +EAK R+ K + + Sbjct: 78 DQVDAILLTHGHEDHIGGVPYLLRERPDIPLVGSRLTLAFIEAKLKEHRI--KPVTVEVR 135 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + G F E + VNHSIP+ +A+ IR+ G ++HTGD+K+D + G VTD + Sbjct: 136 EDHRRKFGPFDCEFIAVNHSIPDGLAVAIRTAAGLVLHTGDFKMDQFPLDGRVTDLRAFA 195 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ + DSTNA G ISE + I + + G V+V++F+S V RI+ ++ Sbjct: 196 RLGQEGVDLFLVDSTNAEVPGFTISEGELAPAIETVFRTTPGRVIVSSFASHVHRIQQVL 255 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG--LYPREQLIVIATGSQ 302 D A+Q GRK+ +G S+ R + +A ++G + + + D+ P Q+ ++ATGSQ Sbjct: 256 DAAQQHGRKVAFVGRSMVRNMGIASELGYLTIPEGLVVDDLKKLERLPANQIAIVATGSQ 315 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +ALA+++ + V++ E DTV+ +S IPGNE AI + N L G V+ + Sbjct: 316 GEPLAALARMANRDHP-VRVTEGDTVLMASSLIPGNENAIYRVINELTRWGANVVHKG-N 373 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 VHVSGH +L Y IRP ++ +HGE HL A+ ++A++ G+ V ++G Sbjct: 374 AKVHVSGHASAGELAYCYNIIRPTNVLPVHGEWRHLRANADIAVRTGVDPKSVLIAQDGS 433 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNI 479 ++ L I V G+ DG +G + + RR L+ G L++ ++D + Sbjct: 434 VIDLVDGRAAITGTVPAGMVYVDGMTVGGATEAHLHVRRTLAEEGVLTIICIVDPATGEL 493 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+ + G D + + + +D++ + E + +A Sbjct: 494 TEDPDYLAHGFERDAMD----FDDATPAIQKALTKASRDGIEDIEQIEELVRAAASGWAH 549 Query: 540 KVWGKKPLVTVFIN 553 + + PL+ I Sbjct: 550 RKHRRSPLIIPVII 563 >gi|114327950|ref|YP_745107.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] gi|114316124|gb|ABI62184.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] Length = 552 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 218/551 (39%), Positives = 326/551 (59%), Gaps = 5/551 (0%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ FLPLGG GEIGMN+ LY SP+ W+ IDCG+ F +LP VD++ D +FI + Sbjct: 7 EIAFLPLGGTGEIGMNLNLYRSRSPAGEHWLAIDCGIGFGGTELPEVDVMMADPSFIAER 66 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R L + ITHAHEDH GA+ LW L PVYASPFA +L K ++ ++ + Sbjct: 67 RDRLTGLVITHAHEDHIGAVAWLWPQLRCPVYASPFAAMVLRRKLSEAQLQNEVRILPLP 126 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + +G FS+ + R+ HS PE++A+ I +P G I+HTGDWKLD D ++G TD++ L Sbjct: 127 LGGALSIGPFSLRTFRMAHSTPESLAIAIDTPHGAILHTGDWKLDPDPLVGPPTDEEGLR 186 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 A+G+EG+LA++CDSTNAM EG SE +++ + D + G V VT F+S+V+R+ SI Sbjct: 187 ALGDEGVLAIVCDSTNAMVEGHSGSESDVRRGLRDAIAGLSGRVAVTCFASNVARVESIA 246 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 AE+ GR + L+G SL+ + + A D G ++ Q FLS++ P + L++I TGSQGE Sbjct: 247 MAAEEAGRSVALVGRSLRNLNTAARDCGYLRDVQQFLSEDDALSVPDDNLLMIVTGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 PRSALA+++ N+ L E DTV+FSSR IPGNE A+ +++ LV +GV +I + +E Sbjct: 307 PRSALARIAADTHPNIALGEGDTVVFSSRVIPGNERAVNTVQDNLVRRGVHLITD-SEAT 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 VHVSGHP +L+R+YQ +RP+ V +HGE HL A +LA + V +G +L Sbjct: 366 VHVSGHPAREELRRLYQLVRPRYSVPVHGEWRHLAAQADLAAEMQAEPVML-EDGDILSF 424 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPE 484 EI+D G + DG + ++ RR++ + G + ++ +D ++ G P+ Sbjct: 425 GSGRPEIVDSAPVGRLVLDGGRLLPLNGGVLSARRRMLYNGVVLASIAVDEDGHLMGRPK 484 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 + G+ ++ ++ LP R D LL E+ SALR L + K Sbjct: 485 LSAPGLFDSQEAEA---ARVINEFAASMDSLPASLRHDDALLTEAARSALRRALGRKLQK 541 Query: 545 KPLVTVFINKI 555 +PLV V + +I Sbjct: 542 RPLVDVHLLRI 552 >gi|169349719|ref|ZP_02866657.1| hypothetical protein CLOSPI_00457 [Clostridium spiroforme DSM 1552] gi|169293794|gb|EDS75927.1| hypothetical protein CLOSPI_00457 [Clostridium spiroforme DSM 1552] Length = 590 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 162/559 (28%), Positives = 278/559 (49%), Gaps = 14/559 (2%) Query: 2 KNEEL--VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 KN + LGG+ EIG NM + + +ID GV F ++ LPG+D V PD + Sbjct: 35 KNNNIDTKVFALGGLNEIGKNMYCIEH----DNELFIIDAGVKFAEEGLPGIDYVIPDYS 90 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKI 118 ++ K K + + ITH HEDH G + L + +P +YA+P A +++ K +R++ Sbjct: 91 YLKKNEKKIRGLMITHGHEDHIGGIPFLLQVVKIPFIYATPLASAMIKRKLDEKRLTNVT 150 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I ++ F+I + NHSIPE+M ++I SP G IV TGD+K D + DV Sbjct: 151 KIIQINDEYQIKSKYFNIGFFKTNHSIPESMGIIINSPNGRIVETGDFKFDLSPVG-DVA 209 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D + +G G+ LM DSTN+ ISEK + ++ + + +G ++V TF+S+V Sbjct: 210 DYQKMSFLGETGVTLLMSDSTNSEVPTFSISEKKVANSVQEEFRKTEGRLIVATFASNVH 269 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I++ A + RKI++ G S++ + V+ +G IK D+ F+ ++ P +++++ Sbjct: 270 RVQQIVEAAVKFNRKILVYGRSMENNIQVSRAMGYIKCPDRFFIKNDQAKKLPDNEILIL 329 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGE +AL++++ G + VK+ DTV+FSS IPGN ++ + N+L G +V+ Sbjct: 330 CTGSQGEALAALSRIANGTHKYVKIKPGDTVVFSSNPIPGNAYSVNVVVNKLFRAGAKVL 389 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 A +H SGH + K M +P+ +HGE L H L+ + G+ Sbjct: 390 INTAFNNLHTSGHASQEEQKLMMLLTKPKYFFPVHGEYRMLKIHAALSQEVGVPAENSFV 449 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG + L + + DG I + + R+ LS G +S+ + +D+ Sbjct: 450 LSNGDTILLNNGEARLGPRIHVEDIYVDGNDISGLSTAVLRDRQILSEDGMVSILISMDS 509 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P I+ G Y D + + K V ++ L Q + ++ + L Sbjct: 510 RAGKLLTHPVIISRGF-VYMKDSFHMIREAEKLVENSLTKLLQ-GKTTFGEIKNTTRDIL 567 Query: 535 RSLLKKVWGKKPLVTVFIN 553 S + + P++ I Sbjct: 568 SSYFYRKTKRNPMIIPVIM 586 >gi|312870082|ref|ZP_07730218.1| ribonuclease J 1 [Lactobacillus oris PB013-T2-3] gi|311094385|gb|EFQ52693.1| ribonuclease J 1 [Lactobacillus oris PB013-T2-3] Length = 611 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 170/565 (30%), Positives = 280/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIIIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 62 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRNAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G I+ TGD+K D + G + Sbjct: 122 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIIQTGDFKFDLTPVGGLPGPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G+EG+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 182 LQQMAKLGDEGVLLLTSDSTNAERPQFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + + YP E+++++ Sbjct: 242 LREASDAAIAQGRKIAVFGRSMENAIAAGQELGYLNIPEDALIDQNEINNYPPEKVLIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPDDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQIDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAELAGVPRENSFIL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D I D + DG G + I +RR LS G ++ ++D Sbjct: 421 ANGDVLALTKDSCRIADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D + L +I S Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHVDQRALNRTIVSR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL + G++P++ + ++ Sbjct: 541 LQKLLFERTGRRPVIIPMVTILNGN 565 >gi|146278025|ref|YP_001168184.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145556266|gb|ABP70879.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 557 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 194/557 (34%), Positives = 303/557 (54%), Gaps = 5/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M L++LPLGG GEIGMN +YGYG + I++D GV+FP + PGVDL+ PDI+ Sbjct: 1 MSANRLIYLPLGGAGEIGMNCYVYGYGPEGRERLIIVDLGVTFPDMETTPGVDLIMPDIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + + AIFITHAHEDH GAL LW L PVYA F + K + Sbjct: 61 WLEERQDRIEAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPVDRI 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + V+ G F ++ V V+HSIPE+ ALVI +P G IVH+GD+KLD ++G+ Sbjct: 121 NIVGARPEVVEAGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPWA 180 Query: 180 KDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 ++ AI E + ALMCDSTN SE + + ++ A+G V+ TTF+S+V+ Sbjct: 181 DETFRAIAAERPVKALMCDSTNVFSLHPGRSEATLADPLRALIAGARGMVVATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + A R I LLG +++R+V A + G++ +S E PR+ L++I Sbjct: 241 RLKTLAEAAAASNRSICLLGRAMRRMVQAAQESGVLSGFPQVVSPEEAAEIPRQNLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQL+RG+ +++ E D +FSS+ IPGNE + + N E GV V+ Sbjct: 301 TGSQGERRAASAQLARGKYLGLEMKEGDLFLFSSKTIPGNERGVLRVVNAFSEMGVDVMD 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + HVSGH DL++++ + P+VLV +HGE HL H +A +GI Sbjct: 361 DAG-GLYHVSGHANRPDLEQVHTLLWPEVLVPMHGEHRHLREHSRIAAAKGITSDVI--T 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 ML +++ + + G DG ++ D + R +++ GH+ V+LD Sbjct: 418 NGMLIDLTRGLQVAEYIDTGRTYLDGNVLIGARDGVVRDRIRMALNGHVLTTVILDEQDE 477 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G + +G+P G + + + + + + +D L E+I +R + Sbjct: 478 PLGEAWVELMGLPERGRTGKALSETMEEELSDYLGRAGAKVMRDDDKLDEAIRRIVRQVS 537 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV ++++ Sbjct: 538 MEEIGKKPEVTVVVSRL 554 >gi|294785214|ref|ZP_06750502.1| metallo-beta-lactamase family protein [Fusobacterium sp. 3_1_27] gi|294486928|gb|EFG34290.1| metallo-beta-lactamase family protein [Fusobacterium sp. 3_1_27] Length = 610 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 57 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 112 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 113 NKSKIKGLFVTHGHEDHIGGIPYLYEKIEKDTIIYGGKLTNALIKSKFENFGVKKDLPKM 172 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 173 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 232 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 233 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 292 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 293 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDKIVILC 352 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 353 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 412 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 413 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 471 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 472 QNGDKIEVTREYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 531 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 532 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLDKKISKNETYLGRDWADLKGNVRDLLS 590 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 591 RFFYEKLKRNPIILPMLLEI 610 >gi|256845480|ref|ZP_05550938.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_36A2] gi|256719039|gb|EEU32594.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_36A2] Length = 610 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 57 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 112 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 113 NKSKIKGLFVTHGHEDHIGGIPYLYEKIEKDTIIYGGKLTNALIKSKFENFGVKKDLPKM 172 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 173 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 232 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 233 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 292 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 293 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDKIVILC 352 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 353 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 412 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 413 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 471 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 472 QNGDKIEVTREYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 531 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 532 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLDKKISKNETYLGRDWADLKGNVRDLLS 590 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 591 RFFYEKLKRNPIILPMLLEI 610 >gi|154175541|ref|YP_001407359.1| hypothetical protein CCV52592_1115 [Campylobacter curvus 525.92] gi|112802440|gb|EAT99784.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 573 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 162/555 (29%), Positives = 290/555 (52%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ PLGG+GEIG NM ++ + I++D G+SFP + + GVD++ PD ++ Sbjct: 22 EHKIRVTPLGGLGEIGGNMTVFE----TDTSAIIVDIGMSFPSESMHGVDILIPDFDYVR 77 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPCI 121 K + + + ITHAHEDH GA+ + P+YA+P +G++ K + ++ Sbjct: 78 KIKDKIKGVIITHAHEDHIGAVPYFYKEFKFPIYATPLPLGMINNKFEEHGLKQERSLFR 137 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +G F +E + + HSI + AL I + G I+HTGD+K+D I G +D Sbjct: 138 SVEKRKPYIIGDFEVEWIHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYASDLG 197 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G G+L LM DSTN+ REG SE + K I AKG V+++TFSS++ R+ Sbjct: 198 RLAYYGERGVLCLMSDSTNSYREGFTKSESSVGKTFDAIFSKAKGRVIMSTFSSNIHRVY 257 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ + RK+ ++G S++R + A+++G +K ++F+ G + +++++ TG Sbjct: 258 QAIEWGLKYNRKVCVIGRSMERNLYTAMELGYVKLDKKIFIDANEVGKFKDNEVLIVTTG 317 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E + +K+ D +I SS+AIPGNE ++ I N L++ G V +D Sbjct: 318 SQGETMSALYRMATDEHKYIKIKPSDQIIISSKAIPGNEGSVSTILNFLIKSGASVAYQD 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH + K M + I+P+ + +HGE H+ HKE A+ G+ + + + Sbjct: 378 F-SEIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIAKHKETAMSCGVDERNIYLMSD 436 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G + + ++ V G D + + +D + R+ L+ G + + + H Sbjct: 437 GDQMEICQKYMKRAKTVKTGKVFIDNQINKQISDDVVIDRQNLAEAGVVMIIAQISRHSQ 496 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P ++ G+ A D + K + + ++ + ++ + KD ++L + +R Sbjct: 497 KLINKPRVISYGLVA-DRQDNEFSKEMEEVLVQFLSNVKEELLKDNRMLEAQVRQVIRKH 555 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 556 IFRKIKKYPTIVPII 570 >gi|256027915|ref|ZP_05441749.1| metal dependent hydrolase [Fusobacterium sp. D11] Length = 620 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 282/560 (50%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 67 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 122 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 123 NKSKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSKFENFGVKKDLPKM 182 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 183 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 242 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 243 FVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 302 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ Sbjct: 303 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDEIVILC 362 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 363 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 422 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 423 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 481 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 482 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKN 541 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 542 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLGKKISKNETYLGRDWADLKGNVRDLLS 600 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 601 RFFYEKLKRNPIILPMLLEI 620 >gi|299822917|ref|ZP_07054803.1| metallo-beta-lactamase [Listeria grayi DSM 20601] gi|299816446|gb|EFI83684.1| metallo-beta-lactamase [Listeria grayi DSM 20601] Length = 555 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 146/550 (26%), Positives = 267/550 (48%), Gaps = 11/550 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+D+L G+D+V PD ++ + + + Sbjct: 13 PLGGVDENGKNLYIVEI----DEDIFILDAGLKFPEDELLGIDVVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF++H HED GAL L + PVY + I L ++ + + Sbjct: 69 AIFLSHGHEDAIGALPYLLQKVKAPVYGTELTIALAKSAMKALPKLRFRNFHVVDEESVL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+++ G +V+TGD+K D A +G + + +G + Sbjct: 129 SFKKIDVSFFRTTHTIPDSVGIVLQTSEGAVVYTGDFKFDQSAAVGYQANLSHIAEVGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A G+ S+ I ++I ++A+G V+V +S+ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGSTASDHLINEDIRHAFRSAEGRVVVACVASNFIRLQQVLDASFA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + RK+ ++G L++VVS+ + + D+L +S ++ P ++ +I TG+ GEP + Sbjct: 249 VKRKVAIVGKELEQVVSIGKKLNKLLIDDELLVSLKTANKLPDHEVTIIETGNLGEPIKS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L Q++ G V + E DTV ++ + P E + + L G +V+ + +S Sbjct: 309 LQQMANGHHPQVNIKEGDTVYITTTSSPALETVMSKTLDMLYRAGAKVLT--MNSNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFP 426 GH DLK M ++P + +HGE L+AH +LA + GI + G ++ Sbjct: 367 GHGSQEDLKLMMNLLKPTYFIPVHGEYRLLIAHAKLAKEVGIPQSNTFVISKGDVVEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 + + + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 NKMSVGNRVYAGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRRSKTIVSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 + G Y + + + K + T V + L++ I L L + ++ Sbjct: 487 ISRGF-VYVRESEDLIEQSSKVITTIVEKNLADPEFEWAKLKQDIRDKLNRYLFEQTKRR 545 Query: 546 PLVTVFINKI 555 P++ I +I Sbjct: 546 PMILPIIMEI 555 >gi|149194710|ref|ZP_01871805.1| hypothetical protein CMTB2_04997 [Caminibacter mediatlanticus TB-2] gi|149135133|gb|EDM23614.1| hypothetical protein CMTB2_04997 [Caminibacter mediatlanticus TB-2] Length = 633 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 295/555 (53%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + F PLGG+ EIG N A+ + I+IDCG+SFP +D+ GVD++ PD T++ Sbjct: 82 KGWVRFTPLGGLDEIGGNCAVLE----TENSAIIIDCGMSFPNEDMHGVDILIPDFTYLR 137 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + R + + ITH HEDH GA+ L+ + P+Y + + ++E K ++ + K Sbjct: 138 EIRHKIKGLIITHGHEDHIGAVPYLFKEMQFPIYGTSLPLAMIENKFKEHKIHQYKSYFR 197 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + + +G F IE + + HSI ++ +L I++PVG I+HTGD+K+D I G D Sbjct: 198 SVKKRHPIQIGDFKIEWIHMTHSIIDSSSLAIQTPVGTIIHTGDFKIDHTPIDGFPPDLH 257 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G+LAL DSTN+ + G SE + K D+ KG V+++TFSS++ R+ Sbjct: 258 RLAYYGEKGVLALFSDSTNSYKPGVTPSESVVGKTFEDLFMKTKGRVIMSTFSSNIHRVY 317 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ + GRK+ ++G S+++ ++VAID+G IK +F+ G Y ++++I TG Sbjct: 318 QAIEKGIKFGRKVCIIGRSMEQNLNVAIDLGYIKLPRDIFIDPYEIGKYQDNEILIITTG 377 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R+VK+ E D +I S++AIPGNE + + N L+++G +V D Sbjct: 378 SQGESMSALYRMAIDEHRHVKIKEGDQIIISAKAIPGNEPTVSQLINFLMKKGAKVAYHD 437 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE--LALQEGIACVPPVRN 418 +HVSGH + K M + ++P+ +HGE HL+ H+E L+ + + + Sbjct: 438 F-SEIHVSGHASQEEQKLMLRLVKPKYFFPVHGEYNHLMKHRETALSTGMKEENIFVMED 496 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G+ + P + + V G D + + + + R++L+ G + V +D + Sbjct: 497 GEQWEITPKRVRKVKNVKTGKIYIDNQINEQIENDVVIDRQKLANEGIIMVVAQVDKQNK 556 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P + GI A D D K + ++ + + + ++ + + +R Sbjct: 557 KLIGRPRVTTYGIIA-DKDDKTFAKEMEDLLVNYIGHAKDYVYEKNRIFENELRNVIRKH 615 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + + Sbjct: 616 VFRKTKKYPTIVPMV 630 >gi|298252949|ref|ZP_06976743.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis 5-1] gi|297533313|gb|EFH72197.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis 5-1] Length = 675 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 173/562 (30%), Positives = 291/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 122 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 177 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK + K+ Sbjct: 178 QDRLDKVEALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLAFVEAKCQEHHIEPKLTR 237 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E + V HSIP+ +A+ +++P G ++ TGD KLD + +TD Sbjct: 238 VEGR--DKMKVGPFNLEFITVTHSIPDALAVCVKTPAGTLIDTGDIKLDQLPLDHRITDL 295 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 296 VEFGRLGEQGIDLLMADSTNAEVPGFVKPETSIGPALDRAFAEATRKIIVASFSSHVHRV 355 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 356 QQVVDAAHKFGRKVVFVGRSMVRNMSIAADLGYLHIPENTVVDLKQAKDVQDDKLVYMCT 415 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RVI Sbjct: 416 GSQGEPMAALGRIADGNHRDITVNEFDTVILASSLIPGNEHEVYKVINKLVQLGARVI-N 474 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +L +Y ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 475 KDNAAIHVSGHCNEGELLYLYNIVKPKCAMPIHGEHRHLVANGLIAVKTGVDPNNVVLAE 534 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D H Sbjct: 535 DGDVVDLYHGNAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTEH 594 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + ++ + D D L++ + L S Sbjct: 595 ADVVSGPKI----FLNAVAEDEADFEKVRHQIVEQLQDAMMRGEHDTHKLQQIMRRTLGS 650 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + IS Sbjct: 651 WVARALRRKPMLVPVVADISEN 672 >gi|255994162|ref|ZP_05427297.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] gi|255993830|gb|EEU03919.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] Length = 603 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 180/558 (32%), Positives = 299/558 (53%), Gaps = 14/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L LP+GG+ EIG NM L+ Y +++DCG+SFP + + G+D+V PD +++ Sbjct: 52 KTHGLKILPIGGLKEIGKNMTLFEY----EDDILILDCGMSFPDEGMHGIDVVIPDFSYV 107 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ +K + I TH HEDH GA+ L+ P+YA+ GL+E K V + K+I I Sbjct: 108 LENKKKIKGIIFTHGHEDHIGAVPYLFKQASFPLYATHLTKGLIENKFVEHGIKKEITPI 167 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G KV VG F I+ +R+ HSI +++ I++P I HTGD+K+D I G+ D Sbjct: 168 --KVGQKVRVGKFVIDPIRITHSIADSLCFEIKTPEHTIFHTGDFKIDYTPIDGEPIDLA 225 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRI 240 L +G +G+ L+ DSTNA R G SE+ + + + I +++K +++ TF+S+V R+ Sbjct: 226 KLAMLGAKGVDILLADSTNATRSGFTDSEQKVGQTMERIFRSSKNSRMIIATFASNVHRV 285 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + IID A RK+ + G S+ V S+A +G +K + + + +P+ ++++I T Sbjct: 286 QKIIDNAVLFKRKVAISGRSMVNVASIAQKLGYLKVPEGIIIELNEIHNFPKNKVVIITT 345 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ E R++++ D V+ SS +PGNE A+ + ++L E+G VI Sbjct: 346 GSQGEPMSALARMANSEHRDIEIENGDVVVLSSTPVPGNEKAVSGVVDKLFEKGANVIYS 405 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 D +HVSGH +LK M+ I+P+ + +HGE HL AH ELA G+ + + Sbjct: 406 DI-ADIHVSGHACQEELKLMHSLIKPKHFIPVHGEYRHLKAHAELAESLGLKKDKIHIID 464 Query: 418 NGKMLRLFPDPIE-IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L ++ D DG IG ++ I +R++L+ G + V + D Sbjct: 465 NGDALVYNKGKVQIYKDYASAEDIYVDGLGIGDVGNIVIKERQKLATSGLILVAITFDKK 524 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P ++ G Y + ++ + + V L +DL L+++I L Sbjct: 525 TKKILAGPNLMSKGF-IYVKENEELMNDMRREAKKLVPLLYDPSNEDLSALKDNIIRKLG 583 Query: 536 SLLKKVWGKKPLVTVFIN 553 S + + P++ Sbjct: 584 SYIYTRTKRNPVIIPVFM 601 >gi|323138160|ref|ZP_08073233.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. ATCC 49242] gi|322396622|gb|EFX99150.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. ATCC 49242] Length = 556 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 235/551 (42%), Positives = 349/551 (63%), Gaps = 1/551 (0%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + VF+P GGVGEIGMN+ALYGYG P +RKW+M+DCG+ FP +LPGVD+VFPDI F+ K Sbjct: 7 DFVFVPFGGVGEIGMNLALYGYGPPKARKWLMVDCGLGFPGPELPGVDVVFPDIAFVEKI 66 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K+L+AI ITHAHEDH GAL LW L V+ASPFA GLLE +R+ E + KI + + Sbjct: 67 AKDLVAICITHAHEDHIGALATLWPKLKCRVFASPFASGLLEVRRLSEPGAPKIDLLPAR 126 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 AG +D+ F++E + V HSIPE AL IR+P+G +HTGDWK+D + +G D+ L Sbjct: 127 AGSVLDLDPFTVEYIAVAHSIPEAHALAIRTPLGVALHTGDWKIDPEPGIGARIDEARLR 186 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ AL+CDSTN +REG SE + + + ++ A G VL+TTF+S+V R+R+I Sbjct: 187 TLGDEGVDALVCDSTNILREGDSFSESDVARTLRTLISEATGRVLITTFASNVQRLRAIA 246 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + A + GR +V+ G ++ RVV VA + G + F S E PRE+++VIATGSQGE Sbjct: 247 EAAMECGRTVVVAGRAMDRVVQVARECGYLDGIPGFHSPELLPTLPREKVVVIATGSQGE 306 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 PR+A+A+ + E ++KL D VIFSSR IPGN + + N L GV VI + + Sbjct: 307 PRAAMARAANNEHPSIKLGPGDRVIFSSRTIPGNAREVHRVINNLCNLGVEVITDH-DHL 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 VH SGHP ++ +MY W+RP+ + +HGE HL H A +G+ V P RNG ++R+ Sbjct: 366 VHCSGHPRRGEVAQMYDWVRPKTAIPVHGEAHHLTQHAAFAKTKGVDQVVPARNGTLVRI 425 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPE 484 P ++ ++ G KDG ++ + D + +R +LS+ G +S+ + +D ++ G P+ Sbjct: 426 APGAPGVVGDIPAGRLFKDGDVVLREDDGAVRERGKLSYAGVVSIALAVDKKGDLVGDPD 485 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 +V G+P G + +++ + + T LP+ RR+D + +I ++R + VWGK Sbjct: 486 VVFAGVPKRGKFGEDMGEVVDEALFATFDGLPRARRRDADAISNAIERSVRGAVFSVWGK 545 Query: 545 KPLVTVFINKI 555 KP+V V + + Sbjct: 546 KPIVHVMVVSV 556 >gi|209545455|ref|YP_002277684.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533132|gb|ACI53069.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 548 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 197/553 (35%), Positives = 324/553 (58%), Gaps = 9/553 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L FLPLGG GEIGMN+ LY G W+ +DCG+ F +D P +++ PD FI+ Sbjct: 5 SDGLAFLPLGGTGEIGMNLNLYRLGGT----WLAVDCGIGFSGNDTPEAEILMPDPVFIV 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +L + ITHAHEDH GA+ LW L PVYA+PFA +L K + +++ Sbjct: 61 DRKADLAGLVITHAHEDHLGAVAHLWPRLGCPVYATPFAAAVLRRKLSEAHLQQQVKIHI 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G + VG F + + V HS+PE ALV+R+P G +VHTGDWK D ++G TD + Sbjct: 121 IPPGGEFMVGPFDLRFIPVTHSVPEAQALVLRTPQGIVVHTGDWKFDPTPMVGPPTDIAA 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A+G+EG+LAL+CDSTN M +G SE +++ + D++ + +G + VT F+S+V+R+ + Sbjct: 181 FEALGDEGVLALVCDSTNVMTQGPSASEADVRRGMTDLIGSLQGRIAVTCFASNVARVET 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I A+ GR +V++G SL+ + A + G + FLS++ P +++++I TGSQ Sbjct: 241 IAKAAQAAGRSVVIVGRSLRNLDVAARECGYLVDVPPFLSEQEANSLPDDEVVLIITGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPRSAL++++ N+ L + DTVI+SSR IPGNE A+ +++ L +GVRV+ + + Sbjct: 301 GEPRSALSRIASDSHPNISLGQGDTVIYSSRMIPGNEQAVMQVQDNLTRRGVRVLTDR-D 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGH D++R++ +RP+ V +HGE HL A+ +A ++G++ + + +G +L Sbjct: 360 HLVHVSGHATGGDVRRLFDMVRPRFAVPVHGEWRHLTANAAIAREKGVSPI-LLEDGDIL 418 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P +E++D G + DG + +A RR++ F G + + +D+ + G Sbjct: 419 NLAPGAVEVVDTAPTGRLVLDGGRLLPINGGVLAARRRMLFNGMVIGSFAVDDEGYLIGD 478 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P++ G+ + + + + ++P R+D RE+ +ALR L + Sbjct: 479 PKVSAPGLLDPE---DPETSRMTEEFGDALDEIPDELRRDDTTFREAAKTALRRALGRKL 535 Query: 543 GKKPLVTVFINKI 555 K+PLV V + ++ Sbjct: 536 QKRPLVDVHLLRV 548 >gi|289765864|ref|ZP_06525242.1| Zn-dependent hydrolase [Fusobacterium sp. D11] gi|289717419|gb|EFD81431.1| Zn-dependent hydrolase [Fusobacterium sp. D11] Length = 552 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 280/558 (50%), Gaps = 14/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ + Sbjct: 1 MYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLENNK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK-IPCIS 122 + +F+TH HEDH G + L+ + +Y L+++K V K + Sbjct: 57 SKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSKFENFGVKKDLPKMVE 116 Query: 123 FQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 117 VGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVDFV 176 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V RI+ Sbjct: 177 RLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHRIQ 236 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID A Q RKI + G SL +V +A VG + + L + S Y ++++++ TG Sbjct: 237 QIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDDEIVILCTG 296 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ + Sbjct: 297 TQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVFKK 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RN 418 +HVSGH + K M I P+ + +HGE L AH A++ G+ + +N Sbjct: 357 I-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLTQN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 416 GDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKNTG 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 476 KIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLGKKISKNETYLGRDWADLKGNVRDLLSRF 534 Query: 538 LKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 535 FYEKLKRNPIILPMLLEI 552 >gi|223984416|ref|ZP_03634554.1| hypothetical protein HOLDEFILI_01848 [Holdemania filiformis DSM 12042] gi|223963611|gb|EEF67985.1| hypothetical protein HOLDEFILI_01848 [Holdemania filiformis DSM 12042] Length = 654 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 281/552 (50%), Gaps = 13/552 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 LGG+GEIG NM + + + I++D GV FP+++L GVD V PD ++++K + Sbjct: 45 IYALGGMGEIGKNMYCFEH----QDEIIIVDAGVRFPEENLLGVDYVIPDYSYLIKNQAK 100 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + A+ ITH HEDH G + L + + +YA FA L++ K R+S+++ + Sbjct: 101 VKALIITHGHEDHIGGIPFLLQSIRLDKIYAPRFACSLIQKKLEERRMSRQVKLVQINED 160 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 ++ F + HSIP+++ ++I +P G IV TGD+K D I +D + I Sbjct: 161 SRITTNHFQVGFFNTIHSIPDSLGILINTPNGRIVETGDFKFDLTPIGT-NSDYQKMAYI 219 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G G+ LM DSTN+ G ISEK + K++ +I + G ++V+TF+S+V+R+ I++ Sbjct: 220 GQIGVSLLMSDSTNSEVSGFSISEKKVAKSLLEITRKTPGRLIVSTFASNVNRVGQILEA 279 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GRK+ + G S++ VV +A +GII ++ F++ + P ++ ++ TGSQGEP Sbjct: 280 AVACGRKVAVFGRSMENVVQIARKLGIIAIPEKHFITPDQLNSLPASKICIVCTGSQGEP 339 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ G R +K+ DTV+FSS IPGN V++ + N+L G V+ + Sbjct: 340 LAALSRIANGTHRWIKIIPGDTVVFSSNPIPGNAVSVSQVVNQLTRVGANVLVNSPLTSL 399 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H +GH + K M Q I+P+ + +HGE L H E A++ G+ NG +L Sbjct: 400 HTTGHGSQEEQKLMLQLIKPKYFMPVHGEYKMLRIHAESAIETGVPRENTFICANGDVLV 459 Query: 424 LFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L + + DG I + + R+ L+ G ++V V +D+ I Sbjct: 460 LRDGEVFQAETRIQTDDIYVDGNDISGLSTAVLRDRKILADNGLVAVIVTIDSRTNKILC 519 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P IV G + + + K V + + L+ I S+L L K Sbjct: 520 RPNIVSRGF-VFIKESQTLLKEAEMIVYEALKKKMMQKTT-FGELKNCIRSSLEPYLYKK 577 Query: 542 WGKKPLVTVFIN 553 + P+V I Sbjct: 578 TNRNPIVIPVIL 589 >gi|300087336|ref|YP_003757858.1| RNA-metabolising metallo-beta-lactamase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527069|gb|ADJ25537.1| RNA-metabolising metallo-beta-lactamase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 532 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 178/539 (33%), Positives = 283/539 (52%), Gaps = 11/539 (2%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M + YG I+IDCG+ FP++D+PG+DLV PDIT++ + R + I ITH HEDH Sbjct: 1 MMVIEYG----EDIIVIDCGLMFPEEDMPGIDLVIPDITYLTERRDKIRGIVITHGHEDH 56 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVR 140 GAL + L P+Y +P GL+ K RV P + GD +D+GAF +E VR Sbjct: 57 IGALPYVLPHLDAPIYCAPLPHGLISVKLKEARVKPSNPVHEVKPGDIIDLGAFKVEFVR 116 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + HSIP+ L+IR+PVG IVH+GD+KLD + G D L IG+EG++ L+ DST+ Sbjct: 117 MCHSIPDAAGLIIRTPVGTIVHSGDFKLDYTPVDGKTCDLSRLAQIGSEGVMLLLADSTH 176 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS 260 G SEK + + I +M NA G V+VTTF+S V+RI+ ++D A + RKI + G S Sbjct: 177 VEIPGYTPSEKVVGETISAVMSNAPGRVIVTTFASLVARIQQVMDAAVKYNRKIFIAGRS 236 Query: 261 LKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 + +V +A+ +G +K + P ++ ++ TGSQGEP SAL +++ GE R Sbjct: 237 MSEIVKMALRLGYLKAPDGLIGELSEMNRLPPNRVALVTTGSQGEPTSALVRIANGEHRE 296 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ + DT+I S+ IPGNE + + L + G +V + VHV GH +L+ + Sbjct: 297 IQIKKDDTIIISASPIPGNESFVSKTIDSLFKLGAQVYYDRI-AKVHVHGHASQEELRLL 355 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVH 437 IRP+ + +HGE HL H +LA Q G+ + + +G +L L P +++ Sbjct: 356 QSLIRPKFFIPVHGEYRHLKLHSQLAEQMGVPRDNIFTLEDGDILELTPGGGKVVGHAPA 415 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGD 496 DG +G + + R+ L+ G + V LD ++ P+IV G + Sbjct: 416 SNVYVDGVSVGDINGVVLRNRKMLAQDGIVVAIVTLDAASGHLAVRPDIVSRGFVDPE-S 474 Query: 497 GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 G + + V+ Q R D ++ + L + ++P++ + + Sbjct: 475 GKALIEESRDLVVNFFETEAQ-RVSDSPVISNRVRDILSRFYYERTRRRPMILPVLVTV 532 >gi|256827183|ref|YP_003151142.1| putative hydrolase of the metallo-beta-lactamase superfamily [Cryptobacterium curtum DSM 15641] gi|256583326|gb|ACU94460.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Cryptobacterium curtum DSM 15641] Length = 631 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 177/559 (31%), Positives = 291/559 (52%), Gaps = 14/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +PLGG+ IG NM ++ G I+ D G+ FP DD PG+DL+ PD T+++ Sbjct: 81 KAQLKVIPLGGLDAIGKNMTVFECG----NDMILDDAGIMFPDDDHPGIDLILPDYTYVL 136 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPC 120 + L I ITH HEDH G+L L L P+YA+ +GL+E K ++ K Sbjct: 137 ENADKLRGIVITHGHEDHTGSLPYLMKDLDCEVPIYATKLTLGLIEGKFAEHKI-KNAKL 195 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + G ++ +G F+ + VNHSIP + + ++P N++HTGD+KLD I G TD Sbjct: 196 IEIKPGQRIKLGFFTCDFFSVNHSIPGAVGIFFQTPAANVLHTGDFKLDQTPIDGITTDF 255 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +L G+ +M DSTNA SE + K + DI+++AKG V++ +F+S + R+ Sbjct: 256 GALSRASEVGVDLMMSDSTNANVPAFTPSEAEVGKVLRDIIRHAKGRVIIASFASHIHRM 315 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I D A + GRK+V+ G S+ + +A +G + +D + P E+++V+ T Sbjct: 316 QQICDAAVEAGRKVVVTGRSMVQNTDIARRLGYLDVRDSDIIDAYDLKGIPPEKVVVMCT 375 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP SALA+++ GE + + + DTVI S+ +PGNE A+ + N L + G V + Sbjct: 376 GSQGEPLSALARIAAGEHKTISIEAGDTVIISATPVPGNEKAVTRVVNLLAKVGADV-YD 434 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 VHVSGH +LK M ++P+ + +HGE HL AH +L GI + + Sbjct: 435 KNRARVHVSGHAGAEELKIMLSIVKPRAFMPVHGEAAHLRAHAQLGRAVGIDPDKIFILE 494 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 NG+ L L + D V G+ DG +G + + +R L G ++ +D Sbjct: 495 NGESLVLSGGNVREGDPVQSGIVFVDGLSVGDTSQDVLDERSALVEQGIATIACAIDRSS 554 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ G ++ GI GD + + TV + + + + ++ AL+S Sbjct: 555 GSVRGSVQVQMRGI--TGGDDAYLAEDAATTVKRALEKVITDGSRKRRDYEKACRQALQS 612 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + ++P+V V + ++ Sbjct: 613 FMWESIKQRPMVIVNLIEL 631 >gi|259502479|ref|ZP_05745381.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259169622|gb|EEW54117.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 610 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 171/565 (30%), Positives = 282/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIIIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++VP+YA PFA+ L++ K + + + Sbjct: 62 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNVPIYAGPFAMSLIKGKLEEKHLLRNAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G I+ TGD+K D + G + Sbjct: 122 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIIQTGDFKFDLTPVGGLPGPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G+EG+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 182 LQQMAKLGDEGVLLLTSDSTNAERPQFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + + YP E+++++ Sbjct: 242 LREASDAAIAQGRKIAVFGRSMENAIAAGQELGYLNIPEDALIDQNEINNYPPEKVLIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQIDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAELTGVPRENSFIL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D I D + DG G + I +RR LS G ++ ++D Sbjct: 421 ANGDVLALTKDSCRIADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D + L +I S Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHVDQRALNRTIVSR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL + G++P++ + ++ Sbjct: 541 LQKLLFERTGRRPVIIPMVTILNGN 565 >gi|253759010|ref|XP_002488904.1| hypothetical protein SORBIDRAFT_2069s002010 [Sorghum bicolor] gi|241947257|gb|EES20402.1| hypothetical protein SORBIDRAFT_2069s002010 [Sorghum bicolor] Length = 510 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 170/512 (33%), Positives = 285/512 (55%), Gaps = 6/512 (1%) Query: 48 LPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 + G+DLV PDIT+++K ++ + I +TH HEDH GAL + ++VP+Y + +GL++ Sbjct: 1 MLGIDLVIPDITYLIKNKEKVRGIVLTHGHEDHIGALPYVLREINVPIYGTKLTLGLIKC 60 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 K + + + G V +GAF +E +R HSI + +AL I +PVG ++HTGD+K Sbjct: 61 KLEEHGLLDTVQMETVHQGQTVQLGAFKVEFIRSTHSIADAVALAIFTPVGTVIHTGDFK 120 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 +D I G D L IG +G+L LMCDSTN EG +SE+ + + I N K Sbjct: 121 IDYTPIEGQPMDLARLAEIGKKGVLLLMCDSTNVENEGYTLSERTVGETFDQIFMNCKSR 180 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESF 286 +LV+TF+S+V R++ I + A + RK+ +LG S+ VV+VA+++G + + + + ++ Sbjct: 181 ILVSTFASNVHRVQQIFNAAVKFERKVTVLGRSMINVVNVAMELGYLNVLEGVLIDLDNM 240 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 PR++L++I+TGSQGEP SAL +++ E + V++ D VI S+ IPGNE I + Sbjct: 241 DKVPRDKLVIISTGSQGEPMSALTRITFNEHKKVEIVPDDLVIISASPIPGNEKLISKVI 300 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 N L ++G +VI E VHVSGH ++K ++ ++P+ + +HGE HL H ELA Sbjct: 301 NELFKKGAKVIYEAL-ADVHVSGHACQEEIKLIHNIVKPKFFMPVHGEHRHLRQHAELAF 359 Query: 407 QEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFV 464 + G+ + + GK+L L + +I V G L DG +G ++ + RR LS Sbjct: 360 KMGMPKENIFIMEIGKVLELTNNSAKINGAVTAGKVLVDGLGVGDVGNVVLRDRRHLSQD 419 Query: 465 GHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 G + V + ++ N+ P+I+ G Y + + + L + + + D Sbjct: 420 GLIVVVITIEGDTGNVVAGPDIISRGF-VYVRESEDLMEQLKEIAKQAIFKSSSKNQGDW 478 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + +I ALR + + +KP++ I +I Sbjct: 479 SIRKSAIREALRDCIYERTKRKPMILPIIMEI 510 >gi|328543702|ref|YP_004303811.1| RNA-metabolising metallo-beta-lactamase family [polymorphum gilvum SL003B-26A1] gi|326413446|gb|ADZ70509.1| RNA-metabolising metallo-beta-lactamase family [Polymorphum gilvum SL003B-26A1] Length = 555 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 248/552 (44%), Positives = 354/552 (64%), Gaps = 1/552 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+VFLPLGGVGEIGMN+ LYGYG R W+++DCGV+F +LPGVDLV PDI F+ Sbjct: 5 NEIVFLPLGGVGEIGMNLGLYGYGPDGDRTWLVVDCGVTFAGPELPGVDLVLPDIRFLEG 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ER + I ITHAHEDHYGAL LW L PVYA+PF GLL AK E + +IP Sbjct: 65 ERDRIAGIVITHAHEDHYGALLHLWPHLRAPVYATPFTAGLLAAKAESEPHAPEIPVTIV 124 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 GD++++G F +E V ++HSIPE AL +R P G +VH+GDWK+D LG D D L Sbjct: 125 NQGDRLNIGPFDVEIVAMSHSIPEPCALALRFPEGLVVHSGDWKIDPTPGLGKPIDMDRL 184 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG EG+LAL+CDSTNA REG SE + + ++ AK V VTTFSS+V+RIR++ Sbjct: 185 AAIGREGVLALVCDSTNAYREGISPSEADVATELKRVIGAAKHRVAVTTFSSNVARIRAV 244 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + A R +V++G S++RV+ VA ++G + F +++FG PR++ +++ TGSQG Sbjct: 245 AEAAAAAERDVVVVGRSMRRVIDVAGELGYLDGLPPFHDEDAFGYLPRDKAVLLCTGSQG 304 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EPR+ALA+++ GE RN+ L D VIFS+R IPGNE + + N L + + ++ + + Sbjct: 305 EPRAALARIASGEHRNIALTRGDLVIFSARTIPGNEKDVNAVVNGLAKAQIEIMTDR-DA 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 +HVSGHP +L+++Y+ ++P+VLV +HGEP HL AH E A + I V NG ++R Sbjct: 364 LIHVSGHPRRGELEQIYKLLKPKVLVPVHGEPFHLAAHAEFARAKKIKTVVVAGNGDIVR 423 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P P E+IDE GL L DG ++ + G+ +RR+LSF G + V ++L+ ++ P Sbjct: 424 LGPGPAEVIDEAPFGLTLVDGKIVNEPELTGVKERRKLSFAGAVVVALVLNRSGDLVDDP 483 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+P D DG + L+LK V + +P+ RRKD L+ E+ A RS + +WG Sbjct: 484 ALALFGLPETDNDGESMEALVLKAVNGAIGSIPKARRKDADLVGEAARRAARSAVADIWG 543 Query: 544 KKPLVTVFINKI 555 KK L V ++++ Sbjct: 544 KKTLCKVLVSRV 555 >gi|296394392|ref|YP_003659276.1| RNA-metabolising metallo-beta-lactamase [Segniliparus rotundus DSM 44985] gi|296181539|gb|ADG98445.1| RNA-metabolising metallo-beta-lactamase [Segniliparus rotundus DSM 44985] Length = 579 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 171/563 (30%), Positives = 297/563 (52%), Gaps = 15/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L LGG+GEIG NM ++ YGS K +++DCGV FP+D PGVDL+ PD + Sbjct: 16 LADGALRVTALGGLGEIGRNMTVFEYGS----KLLIVDCGVLFPEDRQPGVDLILPDFSS 71 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++++ I +TH HEDH GA+ L +PV S F + L+ AK R Sbjct: 72 IENRAEDIVGIVLTHGHEDHIGAVPFLLRVCPDLPVIGSKFTLALVAAKCREHRQKPTFV 131 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ +VDV F +E + VNHSIP+ +A+ IR+P G ++HTGD KLD + G +TD Sbjct: 132 EVTGGEQRQVDV--FGLEFLTVNHSIPDALAVAIRTPAGVVLHTGDIKLDQIPLDGKLTD 189 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G+ G+ + DSTNA G + E+ I + + ++ A V+V F+S V R Sbjct: 190 LAGMSRLGDAGVDLFLVDSTNAEVPGFVMPEREIGEVLDRVIGKAGQRVIVACFASHVHR 249 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ +ID+A GRK+ +G S+ R + +A ++G + + ++ E ++++I+ Sbjct: 250 VQQVIDVAVANGRKVAYVGRSMYRNMRIAQELGYLTVPQGVVVNMEKAAELQDSKVVLIS 309 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++RG+ +++ + D VI +S IPGNE ++ + N L G +V+ Sbjct: 310 TGSQGEPLSALSRMARGDHQSISIQSGDLVILASSLIPGNENSVFAVVNGLTRLGAKVVT 369 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L +Y +RP+ + +HGE HL A+ LA GI V Sbjct: 370 QQ-NAKVHVSGHASAGELLFLYNAVRPKNAMPVHGEWRHLRANGALAQATGIPEKNVVLA 428 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG + L + + +V G DG +G + +++R L G +++NV++D+ Sbjct: 429 ENGVAVDLHGGVAKAVGKVPVGYVYVDGLSVGDVGESTLSERLILGEGGFIAINVVVDSA 488 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---LPQFRRKDLKLLRESISS 532 P ++ G +L++ + + +F++ D + +S+ Sbjct: 489 TGAAVSPPALLGKGFSDDPKALVAAQELVVAELAKLASERGPNAEFKKVDTHQIAQSVRR 548 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 A+ + + ++P++ + + Sbjct: 549 AVGRWVSDAYRRRPMIVPTVTAV 571 >gi|257461217|ref|ZP_05626315.1| ribonuclease J [Campylobacter gracilis RM3268] gi|257441591|gb|EEV16736.1| ribonuclease J [Campylobacter gracilis RM3268] Length = 741 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 291/555 (52%), Gaps = 10/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +E + PLGG+GEIG NM ++ ++ I++D G+SFP++ + GVD++ PD ++ Sbjct: 190 SDETVRITPLGGLGEIGANMTVFE----TNTSAIIVDVGMSFPEESMLGVDILIPDFDYV 245 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 K + + I ITHAHEDH GA+ + P+YA+P +G++ K + ++ Sbjct: 246 RKIKNKIKGILITHAHEDHIGAMPYFFKEFQFPIYATPLPLGMISNKFEEHGLKAERSYF 305 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q +G F +E + + HSI + AL I + G I+HTGD+K+D I G TD Sbjct: 306 RPVQKRQLYQIGDFEVEFIHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTDL 365 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L G+ G++ LM DSTN+ +EG SE + K I + KG V+++TFSS++ R+ Sbjct: 366 NRLAYYGDRGVMLLMSDSTNSHKEGITKSESSVGKTFDTIFSSCKGRVIMSTFSSNIHRV 425 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ + GRK+ ++G S++R + A+++G + ++F+ + YP +++++ T Sbjct: 426 YQAIERGVKYGRKVCVIGRSMERNLFTAMELGYVNLDKKIFVDADQVSKYPDNEVLIVTT 485 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + N L++ G +V + Sbjct: 486 GSQGETMSALYRMATDEHKYIKIKSTDQVIISAKAIPGNESSVSTVLNYLLKSGAKVAYQ 545 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 D +HVSGH + K M + I+P+ + +HGE H+V HKE A++ GI + + Sbjct: 546 DF-SEIHVSGHASIEEQKLMLRLIKPKFFLPVHGEYNHIVKHKETAIECGIEEKNIYLMN 604 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + ++ + V G D + + +D + R+ L+ G + +D + Sbjct: 605 DGDQMEVCEKYLKRVKTVKTGKVFIDNQINKQISDEIVKHRQNLADAGVAVIIAQIDKNE 664 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ G+ A + K + + + +L D L I A+R Sbjct: 665 KRLIQTRVITYGLVA-ENQTAHFTKEMQGIIEQFLANLKDEILLDHWALEGKIRQAVRKH 723 Query: 538 LKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 724 IFRKIKKYPTIVPVI 738 >gi|194466987|ref|ZP_03072974.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194454023|gb|EDX42920.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 618 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIVIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 62 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRNAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 122 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGNLPGPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G++G+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 182 LQQMAKLGDDGVLLLTSDSTNAERPEFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + YP E+++++ Sbjct: 242 LREASDAAIAQGRKIAVFGRSMENAITAGQELGYLNIPKDSLIDQNEINNYPPEKVLIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQVDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAEMTGVPEENSFVL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + DG G + I +RR LS G ++ ++D Sbjct: 421 ANGDVLALTKDSCRVADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D ++L +I S Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHVDQRVLNRTIISR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 541 LQKLLYDRTGRRPVIIPMVTILNGN 565 >gi|298529119|ref|ZP_07016522.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] gi|298510555|gb|EFI34458.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] Length = 552 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 182/558 (32%), Positives = 286/558 (51%), Gaps = 13/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + PLGG+GEIG N + + ++IDCG+ FP D L GVD+V P ++ Sbjct: 4 KDDYVTLTPLGGLGEIGQNCMVLE----TPGTMVLIDCGLMFPDDFLLGVDVVIPRFDYV 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +K R+ L AI +TH HEDH GAL L ++ PVY S F + L+E K + + Sbjct: 60 LKNREKLKAIILTHGHEDHIGALPWLLPYVDAPVYGSRFTLKLVENKLREFNLLEYTRLE 119 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V + +V HSI E + I +PVG IVHTGD+KLD + + G TD + Sbjct: 120 VMDHKTPLQVDDLTFNFFQVCHSIIEGFGIGIETPVGRIVHTGDFKLDPEPLDGHFTDLE 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + EG+L ++ DSTN REG ++E+ IK ++ + A+G +LVT FSS + R++ Sbjct: 180 AFAGFSREGVLLMLSDSTNVEREGYALTEREIKDSLGKVFAEARGRILVTLFSSHIQRMQ 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I D+A + GRK+ + G SL + +A++ G ++ + + + + +++ TG Sbjct: 240 EIFDLAMEHGRKVAVSGKSLASNIEMAMEEGFMRVGSGTYCTLDEISGVEDSRTVLLLTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL +L+ GE R +K+ DTV+ SSR IPGN AI + N L G V E Sbjct: 300 SQGEPLSALTRLALGEHRQLKVKPGDTVLMSSRIIPGNTKAIARVINNLYRLGAEVFYEK 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRN 418 +H SGH + +LK M + + P+ + +HGE HL H LA + G+A V N Sbjct: 360 VRA-IHASGHAHKEELKTMLKTVNPRFFIPVHGEYRHLFKHAALARECGVAPERSLIVEN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+ + F D I + D + L DG +G + +R L G + V +++ Sbjct: 419 GQPVTFFQDSIRLEDRIPSDSTLVDGKGVGDVGHTVLKERHILGGEGLVIVVMVISESTG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P I+ G ++ I + ++ ++P + L E I S LR Sbjct: 479 ELVMGPRILSRGF-IFEQQYDHILEDAKCLLLDVFENVPPGESR---KLEEKIRSTLRKF 534 Query: 538 LKKVWGKKPLVTVFINKI 555 +K+ G+ P+V K+ Sbjct: 535 FRKILGRDPIVVPLAIKV 552 >gi|296117693|ref|ZP_06836277.1| ribonuclease J [Corynebacterium ammoniagenes DSM 20306] gi|295969424|gb|EFG82665.1| ribonuclease J [Corynebacterium ammoniagenes DSM 20306] Length = 584 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 178/556 (32%), Positives = 284/556 (51%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM ++ Y K ++IDCGV FP PGVDL+ PD I Sbjct: 18 KGSLRIYALGGISEIGRNMTVFEY----DGKLLVIDCGVLFPSSGEPGVDLILPDFGPIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +THAHEDH GA+ L +P+ AS F I L+ AK R K I Sbjct: 74 NKIDKIEALIVTHAHEDHIGAIPWLLKLRSDIPIVASRFTIALIAAKCKEHRQRPK--FI 131 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V G F VNHS+P+ + +++ +P GN++HTGD KLD + G TD Sbjct: 132 EVNEKSDVSYGPFRARFWAVNHSVPDALGVMLGTPAGNVIHTGDIKLDQTPLDGRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EG+ ++CDSTNA G SE I ++ +A+ V++ +F+S+V R++ Sbjct: 192 ALSRYGDEGVDLMLCDSTNANIPGVSASEGDIPATFNRLVASARQRVIIASFASNVYRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + ID A + GRK+ G S+ R + +A +G +K +S E ++++I TG Sbjct: 252 AAIDAAVKAGRKVAFNGRSMLRNMEIAEKMGFLKVPRGTIVSIEDAAKMAPHKVVLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D ++FSS IPGNE A+ + N L + G +VI Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDMIVFSSSLIPGNEEAVYGVMNMLSQIGAQVITNK 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 E VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +N Sbjct: 372 -EAKVHASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVDRDRVVLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 G ++ + +++ ++ G DG +G +A R L G +S+ ++DN Sbjct: 431 GVVVDMQNGRAQVVGQLTVGHLYVDGVNMGDVDADTLADRTNLGSGGVVSITCVIDNRTS 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D I + + V T+ DL D + + + + L Sbjct: 491 RLLEHPTVSTTGFSDDDR---GIVPEVAELVENTMNDLASEGENDTYRMVQRLRRKVSKL 547 Query: 538 LKKVWGKKPLVTVFIN 553 + + ++P++ I Sbjct: 548 MDSQYKREPVILPTII 563 >gi|222823064|ref|YP_002574637.1| metallo-beta-lactamase family protein [Campylobacter lari RM2100] gi|222538285|gb|ACM63386.1| metallo-beta-lactamase family protein [Campylobacter lari RM2100] Length = 652 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N+ ++ ++ I++D G+SFP + GVD++ PD ++ Sbjct: 100 SEHKIRITPLGGLGEIGGNITVFE----TNNDAIIVDIGMSFPDGSMHGVDIIIPDFDYV 155 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC- 120 K + + AI ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 156 RKIKNKIRAIIITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 215 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++G F++E + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 216 RPITKRQIYEIGDFNLEWIHITHSIIDACALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 275 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 276 NRLAQYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFAKTKGRVIMSTFSSNIHRV 335 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 336 YQAISYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 395 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE + + + L++ G +V + Sbjct: 396 GSQGETMSALYRMATDEHKFIKIKPSDQVIISAKAIPGNEANVSAVLDFLLKAGAKVAYQ 455 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M I+P+ + +HGE H+ HKE AL+ GI + + Sbjct: 456 EF-SEIHVSGHASIEEQKLMLTLIKPKFFLPVHGEYNHINKHKETALKCGIPERNIYLMS 514 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G + L I+ + V G D + + AD + R++L+ G + + LD Sbjct: 515 DGDQVELCQKYIKRVKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKAS 574 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A DG K + + ++ + K+L I LR Sbjct: 575 KTLINKPRVFSYGLVADKQDGA-FSKEMSDVLSQFFPNVKDEILDNPKVLEAQIRQVLRK 633 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 634 HIFRKIKKYPTIVPTI 649 >gi|209525651|ref|ZP_03274189.1| beta-lactamase domain protein [Arthrospira maxima CS-328] gi|209493984|gb|EDZ94301.1| beta-lactamase domain protein [Arthrospira maxima CS-328] Length = 621 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 177/568 (31%), Positives = 297/568 (52%), Gaps = 22/568 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ Sbjct: 27 NSPKLKIIPLGGLHEIGKNTCVFEY----EDEIIILDAGLAFPTDGMHGVNIVLPDVTYL 82 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 R + + +TH HEDH G + +P +Y A+ LL K VS + Sbjct: 83 RDNRDKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLHGKLEEAGVSDRTEL 142 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V +G F +E +R HSI ++ + I +PVG ++HTGD+K+D + G+ D Sbjct: 143 RTVRPRDIVRIGKNFLVEYIRNTHSIADSFTVAINTPVGVVIHTGDFKVDHTPVDGEFFD 202 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+ L+ DSTNA G SE + N+ IM A G VLVTTF+SSV R Sbjct: 203 FQRLAEYGEKGVHCLLSDSTNAEVPGFTPSEASVYPNLERIMATASGRVLVTTFASSVHR 262 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ IA+++GR + ++G S+ V++ + ++G IK D LF+ + P E+++++ Sbjct: 263 VNIILSIAQKLGRSVAVVGRSMLNVIAHSRNLGYIKCPDNLFIPLNAIRSLPDEKVLILT 322 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +A+ +++ G R + + + DT+IFS+ IPGN +A+ + ++L+ QG V+ Sbjct: 323 TGSQGEPLAAMTRIANGAHRQISIKQGDTIIFSANPIPGNTIAVVNTIDKLMMQGANVVY 382 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH D K M RP+ V +HGE LV H + A GI + + Sbjct: 383 GRHHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVQHSKTAQSMGIPRENMVII 441 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L + I + +V G+ D G D + +R+QL+ G ++V V + + Sbjct: 442 NNGDVVELTENSIRVGGKVPSGIEPVDSSRTGFVRDDVLKERQQLAEDGLITVAVAVSDE 501 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD----------LPQFRRKDLKLL 526 + +PE G+ D + ++K + T+ D + + D + Sbjct: 502 GKLLAIPETHLKGV-VMTADQATFKQQIVKVIEATLSDRWSELSRSFGNGEGNQIDWVGV 560 Query: 527 RESISSALRSLLKKVWGKKPLVTVFINK 554 R I A+ LL++ PL V + + Sbjct: 561 RTEIERAIARLLRRELQSNPL-LVVLMQ 587 >gi|162148796|ref|YP_001603257.1| RNA-metabolising metallo-beta-lactamase protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787373|emb|CAP56968.1| RNA-metabolising metallo-beta-lactamase protein [Gluconacetobacter diazotrophicus PAl 5] Length = 550 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 197/553 (35%), Positives = 324/553 (58%), Gaps = 9/553 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L FLPLGG GEIGMN+ LY G W+ +DCG+ F +D P +++ PD FI+ Sbjct: 7 SDGLAFLPLGGTGEIGMNLNLYRLGGT----WLAVDCGIGFSGNDTPEAEILMPDPVFIV 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +L + ITHAHEDH GA+ LW L PVYA+PFA +L K + +++ Sbjct: 63 DRKADLAGLVITHAHEDHLGAVAHLWPRLGCPVYATPFAAAVLRRKLSEAHLQQQVKIHI 122 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G + VG F + + V HS+PE ALV+R+P G +VHTGDWK D ++G TD + Sbjct: 123 IPPGGEFMVGPFDLRFIPVTHSVPEAQALVLRTPQGIVVHTGDWKFDPTPMVGPPTDIAA 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A+G+EG+LAL+CDSTN M +G SE +++ + D++ + +G + VT F+S+V+R+ + Sbjct: 183 FEALGDEGVLALVCDSTNVMTQGPSASEADVRRGMTDLIGSLQGRIAVTCFASNVARVET 242 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I A+ GR +V++G SL+ + A + G + FLS++ P +++++I TGSQ Sbjct: 243 IAKAAQAAGRSVVIVGRSLRNLDVAARECGYLVDVPPFLSEQEANSLPDDEVVLIITGSQ 302 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPRSAL++++ N+ L + DTVI+SSR IPGNE A+ +++ L +GVRV+ + + Sbjct: 303 GEPRSALSRIASDSHPNISLGQGDTVIYSSRMIPGNEQAVMQVQDNLTRRGVRVLTDR-D 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGH D++R++ +RP+ V +HGE HL A+ +A ++G++ + + +G +L Sbjct: 362 HLVHVSGHATGGDVRRLFDMVRPRFAVPVHGEWRHLTANAAIAREKGVSPI-LLEDGDIL 420 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P +E++D G + DG + +A RR++ F G + + +D+ + G Sbjct: 421 NLAPGAVEVVDTAPTGRLVLDGGRLLPINGGVLAARRRMLFNGMVIGSFAVDDEGYLIGD 480 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P++ G+ + + + + ++P R+D RE+ +ALR L + Sbjct: 481 PKVSAPGLLDPE---DPETSRMTEEFGDALDEIPDELRRDDTTFREAAKTALRRALGRKL 537 Query: 543 GKKPLVTVFINKI 555 K+PLV V + ++ Sbjct: 538 QKRPLVDVHLLRV 550 >gi|297243755|ref|ZP_06927685.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis AMD] gi|296888176|gb|EFH26918.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis AMD] Length = 673 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 292/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 120 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 175 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK + ++ Sbjct: 176 QDRLDKVEALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLAFVEAKCKEHHIDPELIR 235 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E + V HSIP+ +A+ +++P G ++ TGD KLD + +TD Sbjct: 236 VEGR--DKMKVGPFNLEFITVTHSIPDALAVCVKTPAGTLIDTGDIKLDQLPLDHRITDL 293 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 294 VEFGRLGEQGIDLLMADSTNAEVPGFVKPETSIGPALDRAFAEATRKIIVASFSSHVHRV 353 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 354 QQVVDAAHKFGRKVVFVGRSMVRNMSIAADLGYLHIPENTVVDLKQAKDIQDDKLVYMCT 413 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RVI Sbjct: 414 GSQGEPMAALGRIADGSHRDITVNEFDTVILASSLIPGNEHEVYKVINKLVQLGARVI-N 472 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +L +Y ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 473 KDNAAIHVSGHCNEGELLYLYNIVKPKCAMPIHGEHRHLVANGLIAVKTGVDPNNVVLAE 532 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D H Sbjct: 533 DGDVVDLYHGNAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTEH 592 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + ++ + D D L++ + L S Sbjct: 593 ADVVSGPKI----FLNAVAEDEADFEKVRHQIVEQLQDAMMRGEHDTYKLQQIMRRTLGS 648 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + I++ Sbjct: 649 WVARALRRKPMLVPVVADIAKN 670 >gi|332703927|ref|ZP_08424015.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus str. Walvis Bay] gi|332554076|gb|EGJ51120.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus str. Walvis Bay] Length = 554 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 183/561 (32%), Positives = 306/561 (54%), Gaps = 17/561 (3%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M + F PLGG+GEIG+N + G IMIDCG+ FP+D L G+D+V P Sbjct: 1 MADSRKNFTLSPLGGLGEIGLNCMVLECG----DSMIMIDCGIMFPEDYLFGIDIVIPRF 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 F++ + L I ITH HEDH GAL L ++ P+Y+S F + L+E++ + + + Sbjct: 57 DFVLARKDKLKGIIITHGHEDHIGALPWLLPYVDAPIYSSRFTLALIESRLREHDLDRYV 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DV 177 + +VD G ++ RV HSI E L I +P G IVHTGD+K+D + +V Sbjct: 117 DLRPVEGRQRVDFGDIAVNFFRVCHSIIEGFGLGIETPTGRIVHTGDFKIDRTPLDDTNV 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 TD + G+ ++ DSTN R+G ++E+ IK+++ DI A G +LVT FSS + Sbjct: 177 TDLEGFAEFSAPGVQLMLSDSTNVERDGYALTEREIKQSLSDIFAKATGRILVTLFSSHI 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIV 296 R++ IID+AE GRK+ + G S++ + ++ ++G ++ + +F+ +S Y +Q+++ Sbjct: 237 QRMQEIIDLAETYGRKVAISGRSIQNNIDLSRNLGYLRASESIFVPMDSVSNYRDDQIVL 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP S+L +L+ E R +++ E D V+ SSR IPGN AI + NRL + G V Sbjct: 297 LLTGSQGEPLSSLTRLAMSEHRQMRIKEGDLVLMSSRFIPGNTRAITKVINRLYKLGAEV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP-- 414 + E +H SGH + +L +M + ++P+ V +HGE HLV H LA++ G+A Sbjct: 357 LYERV-SGIHASGHAHREELCQMLRTVKPKFFVPVHGEYRHLVKHSRLAVECGVAKERSL 415 Query: 415 PVRNGKMLR-LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + +G+ LR + + ++D + DG +G + +R+ L+ G + VN+++ Sbjct: 416 ILEDGQPLRLFEDNTMRLLDRITVEHIYVDGKGVGDVGSSVLKERQLLAGEGLVIVNLVI 475 Query: 474 DNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 D I PEI G ++ + + V+ ++P +++ L++ I Sbjct: 476 DEKSGEIALGPEITSKGF-VFEQHYAHLLEDAKCIVLDIFENIPPG---EIQKLKDRIRG 531 Query: 533 ALRSLLKKVWGKKPLVTVFIN 553 +LR +KV + P+V + Sbjct: 532 SLRRFFRKVLDRDPVVIPVVI 552 >gi|148544728|ref|YP_001272098.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184154080|ref|YP_001842421.1| putative metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|148531762|gb|ABQ83761.1| RNase J1 [Lactobacillus reuteri DSM 20016] gi|183225424|dbj|BAG25941.1| putative metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] Length = 618 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIVIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 62 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRNAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 122 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGNLPGPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G++G+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 182 LQQMAKLGDDGVLLLTSDSTNAERPEFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + YP E+++++ Sbjct: 242 LREASDAAIAQGRKIAVFGRSMENAITAGQELGYLNIPKDSLIDQNEINNYPPEKVLIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQVDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAEMTGVPKENSFVL 420 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + DG G + I +RR LS G ++ ++D Sbjct: 421 ANGDVLALTKDSCRVADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D ++L +I S Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHIDQRVLNRTIISR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 541 LQKLLYDRTGRRPVIIPMVTILNGN 565 >gi|320094028|ref|ZP_08025852.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 178 str. F0338] gi|319979033|gb|EFW10552.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 178 str. F0338] Length = 563 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 162/559 (28%), Positives = 292/559 (52%), Gaps = 15/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L +PLGG+GE+G NM + + K +++DCGV FP++ PGVDL+ PD ++ Sbjct: 14 LEKGALRVIPLGGLGEVGRNMNVLEF----EGKLLVVDCGVLFPEETQPGVDLILPDFSW 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + +++ + +TH HEDH GA+ L +P+Y S + + K R+S Sbjct: 70 IEERMDDVVGLVLTHGHEDHIGAVPYLLKLRGDIPIYGSDLTLAFVAPKLREHRLSDPGL 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + GD++ VG F +E V V HSIP+ +A+ +R+ I+ TGD+K+D + +TD Sbjct: 130 NVV-AEGDRLAVGPFDLEFVSVTHSIPDALAVFVRTSAAKILITGDFKMDQLPLDRRLTD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ M DSTNA+ G E+ I + + A G ++V +F+S V R Sbjct: 189 LRAFARMGEEGVDLFMVDSTNALVPGFITPEREIGPVLDQVFGEATGQIVVASFASHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIA 298 ++ +I+ A GR++ L+G S++R + +A + G + + + + + P Q + +A Sbjct: 249 VQQVINAAHHHGRRVALVGRSMERNMRIAEEKGHLAIPEGVVVDLKEIDQLPPSQRVYMA 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++S G + V + D V+ +S IPGNE ++ + N L G RV++ Sbjct: 309 TGSQGEPMAALSRMSVGSHKTVTIGAGDMVVLASSLIPGNENSVYRVINDLTRLGARVVS 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 ++ VHVSGH +L Y I+P+ ++ IHGE HLV + +LA++ GI V Sbjct: 369 KE-NAKVHVSGHASAGELIYCYNIIQPKNVMPIHGEVRHLVGNGQLAVKTGISPESVVLA 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G + + + V DG IG+ ++ + RR L G +S+ ++++ Sbjct: 428 EDGVTVDVKDGTARVSGVVPCEYVYVDGRSIGEISEDELETRRTLGAEGFISIFAVVEHD 487 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P I IG + + +L V + + D +D +L++++ + Sbjct: 488 SGTVLAGPTIRAIG----MAEDDSVFDEILPDVASALKDAAAPGGQDPYVLQQAMRRVIG 543 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 544 RWVARRLRRRPMIVPVVTE 562 >gi|283783595|ref|YP_003374349.1| hypothetical protein HMPREF0424_1150 [Gardnerella vaginalis 409-05] gi|283441783|gb|ADB14249.1| conserved hypothetical protein [Gardnerella vaginalis 409-05] Length = 675 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 172/562 (30%), Positives = 291/562 (51%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 122 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 177 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK + ++ Sbjct: 178 QDRLDKVEALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLAFVEAKCKEHHIDPELIR 237 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ VG F++E + V HSIP+ +A+ +++P G ++ TGD KLD + +TD Sbjct: 238 VEGR--DKMKVGPFNLEFITVTHSIPDALAVCVKTPAGTLIDTGDIKLDQLPLDHRITDL 295 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 296 VEFGRLGEQGIDLLMADSTNAEVPGFVKPETSIGPALDRAFAEATRKIIVASFSSHVHRV 355 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 356 QQVVDAAHKFGRKVVFVGRSMVRNMSIAADLGYLHIPENTVVDLKQAKDIQDDKLVYMCT 415 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RVI Sbjct: 416 GSQGEPMAALGRIADGNHRDITVNEFDTVILASSLIPGNEHEVYKVINKLVQLGARVI-N 474 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +L +Y ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 475 KDNAAIHVSGHCNEGELLYLYNIVKPKCAMPIHGEHRHLVANGLIAVKTGVDPNNVVLAE 534 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G ++ L+ ++ V G DG +G+ D + KRR L G +S V++D H Sbjct: 535 DGDVVDLYHGNAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTEH 594 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + + ++ + D D L++ + L S Sbjct: 595 ADVVSGPKI----FLNAVAEDEADFEKVRHQIVEQLQDAMMRGEHDTHKLQQIMRRTLGS 650 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + IS Sbjct: 651 WVARALRRKPMLVPVVADISEN 672 >gi|331698413|ref|YP_004334652.1| beta-lactamase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953102|gb|AEA26799.1| beta-lactamase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 594 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 285/555 (51%), Gaps = 16/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GE+G NM ++ Y + +++DCGV FP +D PGVDL+ PD I Sbjct: 51 LRVFALGGIGEVGRNMTVFEY----DGRLLVVDCGVLFPSEDSPGVDLILPDFRAIEDRL 106 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L + V S F + L+ AK R++ + + Sbjct: 107 DDVDALVLTHGHEDHIGAVPFLLRQKPDLLVVGSRFTLALVAAKCREHRLTPHLLEV--A 164 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G ++ G + E VNHSIP+ +AL +R+P G ++HTGD KLD + +TD Sbjct: 165 EGARLTHGPWDCEYFAVNHSIPDALALAVRTPAGLVLHTGDIKLDQLPLDNRLTDLAGFS 224 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+EG+ + DSTNA G E+ I I + A ++V F+S V R++ ++ Sbjct: 225 RLGDEGVDLFLVDSTNADIPGFVTPEREIGPVIEGVFHRASSRIIVACFASHVHRVQQVL 284 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GR++ L+G S+ R + +A ++G+++ D L + + P +QL++++TGSQG Sbjct: 285 DAAAKHGRRVCLVGRSMVRNMGIAGELGLLQIPDGLLVDLDEAMTLPDDQLVLVSTGSQG 344 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++RG+ R+V++ +DT+I +S IPGNE A+ + N L G VI + Sbjct: 345 EPLSALSRMARGDHRSVRIRPEDTIILASSLIPGNETAVFGVINGLTRLGASVIHQG-NA 403 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L +Y +RP +V +HGE HL A+ LA+Q G+ V NG + Sbjct: 404 KVHVSGHAPAGELLFLYNAVRPSNVVPVHGEWRHLRANGRLAVQTGVQEDRVVLAENGVV 463 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 + L I V G DG +G + ++ R L G + + V +D Sbjct: 464 VDLVDGIAAISGRVEVGRVYVDGLAVGDIGETTLSDRLTLGEGGFIQITVAVDARTGRAV 523 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G D K ++L + + D + +++ + + + Sbjct: 524 APPTLAGRGFS----DDPKALDVVLPLIEDELSRTENEGITDPYRIAQAVRRVVGKWVGE 579 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + + Sbjct: 580 TYRRRPMIVPTVIAV 594 >gi|294786541|ref|ZP_06751795.1| metallo-beta-lactamase family protein [Parascardovia denticolens F0305] gi|315226119|ref|ZP_07867907.1| metallo-beta-lactamase [Parascardovia denticolens DSM 10105] gi|294485374|gb|EFG33008.1| metallo-beta-lactamase family protein [Parascardovia denticolens F0305] gi|315120251|gb|EFT83383.1| metallo-beta-lactamase [Parascardovia denticolens DSM 10105] Length = 617 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 166/563 (29%), Positives = 289/563 (51%), Gaps = 17/563 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 60 RKGSMRIVPLGGLGEIGRNMNVVEY----NGHILLIDCGVLFPEEEQPGVDLILPDFSYI 115 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK + Sbjct: 116 RPRLDKVEALVLTHGHEDHIGGVPYLLRERPDIPLIGSKLTLAFVEAKCREHHIDP--IM 173 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 DK+ VG F++E + V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 174 HPVSGRDKMKVGPFNLEFITVTHSIPDALAVSVKTPAGHLIDTGDMKLDQLPLDHKITDL 233 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ LM DSTNA G E I + +AK ++V +FSS V R+ Sbjct: 234 REFARLGEQGVDLLMADSTNAEVPGFVKPETSIGPALDKAFSDAKRKIIVASFSSHVHRV 293 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R + +A D+G + + + + ++L+ + T Sbjct: 294 QQVVDTAHKYGRKVVFVGRSMIRNMGIAADLGYLHLPENTVVDLKESRDIQDDKLVYMCT 353 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G ++ + E DTVI +S IPGNE + + N+L G RV+ Sbjct: 354 GSQGEPMAALGRIADGNHPDIAINEFDTVILASSLIPGNEHEVYKVINKLARLGARVV-N 412 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +HVSGH +L Y ++P+ + IHGE HL+A+ +A++ G+ V Sbjct: 413 RDNAAIHVSGHSNEGELLYFYNIVQPKCAMPIHGENRHLIANGLIAVKTGVDPNNVILAE 472 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G ++ L+ I+ V G DG +G+ + + KRR LS G +S V++D + Sbjct: 473 DGDVVDLYHGQAAIVGSVPCGYVYVDGDSVGEITEDELEKRRILSEEGFVSSFVVVDTDK 532 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+I + + + ++T + D D L++ + L S Sbjct: 533 KEVVSGPKI----FINAMAEDVSDFQDVQSQIVTALNDAMLQGTTDTYQLQQKMRRTLGS 588 Query: 537 LLKKVW-GKKPLVTVFINKISRQ 558 + + + ++P+V + +++ Sbjct: 589 WIGRTFRRRRPMVVPVVADLAKD 611 >gi|227530171|ref|ZP_03960220.1| metallo-beta-lactamase [Lactobacillus vaginalis ATCC 49540] gi|227349924|gb|EEJ40215.1| metallo-beta-lactamase [Lactobacillus vaginalis ATCC 49540] Length = 620 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 170/566 (30%), Positives = 278/566 (49%), Gaps = 12/566 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 6 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIIIDCGVLFPEDELLGVDYVIQNYDY 61 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 62 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRDAEL 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 122 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGHLPGPN 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G++G+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 182 LQQMAKLGDDGVLLLTSDSTNAERPQFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + YP E+++++ Sbjct: 242 LREASDAAIAQGRKIAVFGRSMENAITAGQELGYLNIPKDSLIDQNEINNYPPEKVLIMC 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + DTV+FSS IPGN ++ + N+L E G VI Sbjct: 302 TGSQGEPMAALSRIANGTHRQITIQPGDTVVFSSNPIPGNTTSVNALINKLEEDGANVIH 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 362 GYVN-NIHTSGHGGQIDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAEMTGVPQKNSFIL 420 Query: 417 RNGKMLRLFPDPIEIIDEVVH-GLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D I D + DG G + I +RR LS G ++ ++D Sbjct: 421 ANGDVLALTKDSARIADHIDSAADVYIDGRDAGDTVGNPEIHERRLLSEEGVVTAVAVVD 480 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D + L +I S Sbjct: 481 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHVDRRALNRTIISR 540 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L+ LL G++P++ + ++ R Sbjct: 541 LQKLLYARTGRRPVIIPMVTILNGDR 566 >gi|172035211|ref|YP_001801712.1| CHP_MG423-containing protein [Cyanothece sp. ATCC 51142] gi|171696665|gb|ACB49646.1| CHP_MG423-containing protein [Cyanothece sp. ATCC 51142] Length = 589 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 177/560 (31%), Positives = 301/560 (53%), Gaps = 20/560 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N + Y + + I+ID G++FP +++ GV++V PD+T++ Sbjct: 6 KQSNLKIIPLGGLHEIGKNTCVLEY----NDEIILIDAGIAFPTEEMHGVNIVLPDMTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + TH HEDH G + +P +Y A+ LL+ K VS + Sbjct: 62 RENRHKIKGMIATHGHEDHIGGIPYHLKQFDIPKIYGPKLAMSLLKDKLEEAGVSDRTKL 121 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V V F +E +R HSI ++ + I +P+G ++HTGD+K+D + G+ D Sbjct: 122 QTVSPREMVRVSPSFLVEFIRNTHSIADSFTIAIHTPLGVVIHTGDFKVDHTPVDGEFFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G+ SE + N+ I+ A+ +++TTF+SSV R Sbjct: 182 FQKLAEHGEKGVLCLLSDSTNAEVPGSTPSESSVYPNLDRIIAQAEARLMITTFASSVHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ +A++ RK+ ++G S+ V++ A ++G IK D LF+S ++ P EQ++++ Sbjct: 242 VNIILQLAQKHKRKVAVVGRSMLNVIAHARELGYIKCPDDLFVSLKAANNLPDEQVLILT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL ++SRG R++K+ DT++FS+ IPGN +A+ + +RL+ QG +VI Sbjct: 302 TGSQGETLAALTRISRGSHRHIKVRPGDTIVFSANPIPGNTIAVVNTIDRLMMQGAKVIY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH D K M RP+ V +HGE LV H E A + GI + + Sbjct: 362 GRHHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVKHAETAYKMGIPADNIVII 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + D I + +V G+ L D + + + R+QL+ G ++V + Sbjct: 421 NNGDIVEVSEDSIGVAGKVPSGIELVDQAGV--VHEHVMEDRQQLAQDGVVTVAAAISWE 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-------LPQFRRKDLKLLRES 529 N+ PE+ G+ + + I +L+++ + + + D L+E Sbjct: 479 GNLLTSPEVDLRGVVSKV-EYSLIKQLIIRAIENILENRWNEFASGDGKTEVDWDYLQEE 537 Query: 530 ISSALRSLLKKVWGKKPLVT 549 I + L+ L+K+ PLV Sbjct: 538 IENTLQRLVKRELRSYPLVI 557 >gi|329850712|ref|ZP_08265557.1| RNA-metabolising metallo-beta-lactamase family protein [Asticcacaulis biprosthecum C19] gi|328841027|gb|EGF90598.1| RNA-metabolising metallo-beta-lactamase family protein [Asticcacaulis biprosthecum C19] Length = 547 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 199/548 (36%), Positives = 314/548 (57%), Gaps = 4/548 (0%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 FLPLGG EIGMN+ LYG+G R+WI++D GV+F PG++++ PD F++ +N Sbjct: 2 FLPLGGSNEIGMNLNLYGFGPADDRQWIIVDVGVTFGDLTTPGIEVIAPDPEFLV--GEN 59 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 L+ I +THAHEDH GAL LW + PV+A+PF L+ K V Sbjct: 60 LLGIVLTHAHEDHIGALGWLWDKIKAPVFATPFTAFLIREKLREAGV-DDADITEVPLNG 118 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 V +G F I+ + + HSIPE L I++P+G I+HTGDWK+D++ I G TD L +G Sbjct: 119 NVKLGPFDIDYITITHSIPEPNGLAIKTPLGTILHTGDWKIDEEPITGQPTDIAELKRLG 178 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 ++G+LA++CDSTN EG SE G+++ + +++ K V V F+S+V+R+ S++ A Sbjct: 179 DQGVLAMVCDSTNVFVEGRAGSEAGVREELEKLIRTFKKRVAVACFASNVARMDSVMRAA 238 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 R++ L+G S+ R+++ + VG+++ +S+ + Q++ + TGSQGEPR+ Sbjct: 239 MACKRQVCLVGRSMHRMLAASRHVGLLQGIPDPISEGEAANFKPHQVLYLCTGSQGEPRA 298 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 AL++++ G VKL E D +FSSR IPGNE+AI ++NRL + GV + E +HV Sbjct: 299 ALSRIADGNHPQVKLKEGDVCVFSSRVIPGNEIAIRSLQNRLSDLGVEIHTERDHPGIHV 358 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPD 427 SGHP +LK MYQW+RP + V HGE HL+ H LA + G+ RNG M+RL P Sbjct: 359 SGHPCREELKDMYQWVRPAISVPTHGERRHLLKHAALAAELGVPRQVTPRNGDMVRLAPG 418 Query: 428 PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVD 487 EIIDEV G DG ++ A + +RR + G + V L++ + + ++ Sbjct: 419 LPEIIDEVPSGRLFVDGGMLVPEASEALRERRHAAHNGMIFVAFALNSKNQLASIVDVRG 478 Query: 488 IGIPAYDGDG-GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 +G+ + D + L TV + +P R D + + ++ ++ + +W ++P Sbjct: 479 LGLAFENEDTISDQLESLCATVEKALKAMPNEARDDDETVETVVARVVKKAAQAIWDRRP 538 Query: 547 LVTVFINK 554 +V I + Sbjct: 539 IVETIILR 546 >gi|34763180|ref|ZP_00144146.1| Zn-dependent hydrolase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887149|gb|EAA24254.1| Zn-dependent hydrolase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 552 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 165/558 (29%), Positives = 279/558 (50%), Gaps = 14/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ + Sbjct: 1 MYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLENNK 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPCIS 122 + +F+TH HEDH G + L+ + +Y L+++K V K + Sbjct: 57 SKIKGLFVTHGHEDHIGGIPYLYEKIEKDTIIYGGKLTNALIKSKFENFGVKKDLPKMVE 116 Query: 123 FQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + KV VG F++E V+V HSI ++ +L +++P G++ TGD+K+D + + D Sbjct: 117 VGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDFKIDLTPVDNEKVDFV 176 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V RI+ Sbjct: 177 RLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHRIQ 236 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 IID A Q RKI + G SL +V +A VG + + L + S Y +++++ TG Sbjct: 237 QIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISSVDKYDDNKIVILCTG 296 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ + Sbjct: 297 TQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVFKK 356 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RN 418 +HVSGH + K M I P+ + +HGE L AH A++ G+ + +N Sbjct: 357 I-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLTQN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + + +I +V G L DG +G I R+QLS G + V +D + Sbjct: 416 GDKVEVTREYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKNTG 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 476 KIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLGKKISKNETYLGRDWADLKGNVRDLLSRF 534 Query: 538 LKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 535 FYEKLKRNPIILPMLLEI 552 >gi|144900802|emb|CAM77666.1| metallo-beta-lactamase superfamily protein [Magnetospirillum gryphiswaldense MSR-1] Length = 557 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 207/559 (37%), Positives = 322/559 (57%), Gaps = 12/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++L+FLPLGG GEIGMNM LYG+ KW+M+D GV+F D +P +D+V D +I Sbjct: 5 KDQLIFLPLGGAGEIGMNMNLYGH----DGKWLMVDVGVTFGDDTMPMIDVVMADPAWIE 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + R L I ITH HEDH GA+H LW L PVYA+PFA +L K + +++P Sbjct: 61 ERRDKLAGIVITHGHEDHVGAVHYLWQRLKCPVYATPFAAAILMGKLHEVGLQRQVPVHV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G + DVG F+IE V + HSIPE +L IR+ G ++HTGDWK D D ++ D ++ Sbjct: 121 IPLGGRFDVGPFNIEMVSLTHSIPEPNSLAIRTKAGTVLHTGDWKFDPDPLISAPADTET 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IGNEG+LA++ DSTN G SE ++ N+ ++ + ++ F+++V+R+ S Sbjct: 181 LRRIGNEGVLAMVGDSTNVFTRGHSGSEAEVRANLIGLLSRYDRRIAISCFATNVARVES 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + AE GR + L+G SL R+ A ++G +K FL+D P ++++ + TGSQ Sbjct: 241 VALAAEANGRSVALVGRSLWRIEKAARELGYLKDIAPFLNDHDAAHLPADKVLYLCTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+ALA+++ + NVKL++ D VIFSSR IPGNE I ++N LV GV V+ + + Sbjct: 301 GEPRAALARIAGNDHPNVKLSKGDVVIFSSRIIPGNEKPIFKLQNDLVRMGVEVVTDR-D 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+HVSGHP ++++ MYQ++RP++ + +HGE H+ H LA G+ + NG M+ Sbjct: 360 EPIHVSGHPARDEMQAMYQYVRPRIAIPVHGEARHVKEHCALATACGVEQTLAIENGAMV 419 Query: 423 RLFPDPIEIIDEVVHGLFLKDGF------LIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 RL P P E+ID V G DG + + + RR++ F G ++ D Sbjct: 420 RLAPGPAEVIDHVPVGRLAVDGQALEGGPRLVRLDSAVLRDRRRMVFNGSCVCTIVADRK 479 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P++ +G+ + + H +++ +LP R+D + E++ A+R Sbjct: 480 GKLLSEPQVTALGLLDAEHFAEE-HDAVVEAAREAFDELPLKARQDDAVAAEAVRRAVRR 538 Query: 537 LLKKVWGKKPLVTVFINKI 555 LK + KP+ TV + ++ Sbjct: 539 ELKSMLNHKPITTVHLVRV 557 >gi|169630166|ref|YP_001703815.1| hypothetical protein MAB_3083c [Mycobacterium abscessus ATCC 19977] gi|169242133|emb|CAM63161.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 563 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 292/560 (52%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + L LGG+ EIG NM ++ + ++IDCGV FP + PGVDL+ PDI Sbjct: 15 LADGALRVTALGGISEIGRNMTVFE----LRGRLLIIDCGVLFPGHNEPGVDLILPDIRH 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ A+ +THAHEDH GA+ L +PV S F + L+EAK R++ + Sbjct: 71 IEDRLEDVEALVLTHAHEDHIGAIPFLLKMRPDIPVVGSAFTLALVEAKCREHRITPRFI 130 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ G F E VNHSIP+ +A+ + + G I+HTGD KLD TD Sbjct: 131 RVTEGERSTH--GPFECEYFAVNHSIPDALAIAVHTEAGTILHTGDIKLDPLPPDRRPTD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G+ G+ + DSTN+ G SE I + +++ A+G V+V F+S+V+R Sbjct: 189 LPGLSGLGDRGVDLFLVDSTNSEVPGVGPSESEIAPTLNRLIETARGRVIVACFASNVAR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ IID + GR++ L+G S+ R + +A ++G ++ D+ ++ E+ +++++I Sbjct: 249 VQQIIDASVAHGRRVALVGRSMVRNMGIARELGFLEVDDRDLINVEAANELAPQRVVLIT 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL++++RG+ R + L D VI SS +PGNE A+ I + L + G RV+ Sbjct: 309 TGTQGEPMAALSRMARGDHRQITLTPDDLVILSSSLVPGNEEAVYGIIDSLAKVGTRVVT 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 VHVSGH Y +L +Y +RP+ ++ +HG HL A+ LA + G+ + Sbjct: 369 N-THARVHVSGHAYAGELLYLYNAVRPRNVMPVHGTWRHLRANAGLAAKTGVEEGRIVLA 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L + I V G G + G +D + +R L G ++V V++ ++ Sbjct: 428 ENGVSVDLHNERARISGRVPVGKMFVHGLVDGDVSDATVGERLVLGNGGFVAVTVVVRSN 487 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 G P++ G D K + + VIT + L + D + +S+ + Sbjct: 488 GRPVGRPQLFSRGFS----DDAKALDPVTELVITELNSLAEQSVNDTGRIAQSVRRVVGK 543 Query: 537 LLKKVWGKKPLVTVFINKIS 556 + + + ++P++ + + Sbjct: 544 WVGETYRRQPMIVPTVLTVD 563 >gi|15827796|ref|NP_302059.1| hypothetical protein ML1512 [Mycobacterium leprae TN] gi|13093348|emb|CAC30463.1| conserved hypothetical protein [Mycobacterium leprae] Length = 558 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 169/555 (30%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTIFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH GA+ L +PV S F + L+ AK R+ + Sbjct: 72 DDIEALVLTHAHEDHIGAIPFLLKLRSDIPVVGSKFTLALVAAKCREHRIKPVFVEVVGG 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + G F E VNHSIP+ + + + + G ++HTGD KLD + G TD + Sbjct: 132 QSSRH--GVFECEYFAVNHSIPDALTIAVYTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A G V+V F+S+V R++ +I Sbjct: 190 RLGDAGVDLFLCDSTNAEIPGVGPSESEVGPTLHRLIQGADGRVIVACFASNVDRVQQVI 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R +S+A D+G ++ D + + + EQ+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMSIARDLGFLRVDDSHMIDIAAAEMMAPEQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE +++ L D V+ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHQSITLTSGDLVVLSSSLIPGNEEAVYGVIDALAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRQVMPVHGTWRMLRANAKLAASTGVPEDSILIAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 + L + V G DG + G D+ + +R LS G ++V V++ + Sbjct: 429 VDLVAGKASVSGAVPVGKMFVDGLITGDVGDVILGERLILS-SGFVAVTVVVKRSTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 VP++ G + K + ++ V + L D + +++ A+ + + Sbjct: 488 TVPQLYSRGFS----EDPKALEPAVRKVEAELESLLAENVTDPSKIAQAVRRAIGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|240171171|ref|ZP_04749830.1| hydrolase [Mycobacterium kansasii ATCC 12478] Length = 558 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGGVGEIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGVGEIGRNMTVFEHL----GRLLIIDCGVLFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH GA+ L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSRFTLALVAAKCREHRI--KPVFVEVA 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G G F E VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGQSSRHGVFECEYFAVNHSIPDALAIAVYTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNAEIPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + + P EQ+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDLIDIAAAEMMPAEQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R + L D ++ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRRITLTSGDLIVLSSSLIPGNEEAVYGVIDELSKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYSGELLFLYNGVRPRHVMPVHGTWRMLRANAKLAAGTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G ++ + +R LS G ++V V++ Sbjct: 429 VDLVGGRASIAGAVPVGKMFVDGLITGDVGEITLGERLILS-SGFVAVTVVVKRGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 AAPHLYSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPTRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|254302946|ref|ZP_04970304.1| metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323138|gb|EDK88388.1| metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 631 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 279/560 (49%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 78 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 133 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +Y L+++K V K Sbjct: 134 NKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNALIKSKFENFGVKKALPKM 193 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ L +++P G++ TGD+K+D + + D Sbjct: 194 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYCLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 253 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G ++V F+S V R Sbjct: 254 FMRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVVAVFASHVHR 313 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A Q RKI + G SL +V +A VG + L + S Y ++++++ Sbjct: 314 IQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLNIPQNLLIPISSVDKYDDDEIVILC 373 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 374 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 433 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 434 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 492 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D Sbjct: 493 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKE 552 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ ++ L Sbjct: 553 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLAKKINKNETYLGRDWADLKGNVRDLLS 611 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 612 RFFYEKLKRNPIILPMLLEI 631 >gi|325068433|ref|ZP_08127106.1| beta-lactamase domain protein [Actinomyces oris K20] Length = 561 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 170/559 (30%), Positives = 292/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + + PLGG+GE+G NM ++ K +++DCGV FP++D PGVDL+ PD + Sbjct: 13 LADGAMRITPLGGLGEVGRNMTVFE----LDGKLLIVDCGVLFPEEDQPGVDLILPDFSS 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++A+ +TH HEDH G + L +P+ S + +EAK R+ + Sbjct: 69 IEHRIDDVVALVLTHGHEDHIGGVPYLLRLREDIPLVGSELTLAFVEAKLKEHRIRPVLR 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++V G F +E V VNHSIP+ MA++IR+ GN++ TGD+K+D I G +TD Sbjct: 129 QVI--EHEEVSYGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 S G EG+ DSTNA G E I + + ++ ++ G ++V +F+S V R Sbjct: 187 LRSFARFGEEGVDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIVVASFASHVHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A R++ L+G S+ R + +A + G +K + + P + +++ Sbjct: 247 VQQVLDAAALHDRRVALVGRSMVRNMGIAAERGYLKVPAGVLIDARDITSLPPHERVLMV 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ E R+V + DTVIF+S IPGNE ++ + N+L+ G RV+ Sbjct: 307 TGSQGEPMAALSRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + VHVSGH +L +Y ++P+ ++ IHGE HLVA+ LA++ GIA V Sbjct: 367 QG-NAKVHVSGHASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGIAPERVMLC 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DN 475 +G + L I +V G DG +G+ + + RR L+ G +SV ++ Sbjct: 426 EDGVAVDLEGGVARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETT 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P I G+ D +I + + + + + D L++ + L Sbjct: 486 TGTILAGPHIQARGVAEDDSVFEEILPDVTEALSAALET----GKADAYSLQQVMRRTLG 541 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 542 RWIGRRLRRRPMIVPVVIE 560 >gi|326773696|ref|ZP_08232979.1| metallo-beta-lactamase family protein [Actinomyces viscosus C505] gi|326636926|gb|EGE37829.1| metallo-beta-lactamase family protein [Actinomyces viscosus C505] Length = 561 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 171/559 (30%), Positives = 293/559 (52%), Gaps = 16/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + + PLGG+GE+G NM ++ G K +++DCGV FP++D PGVDL+ PD + Sbjct: 13 LADGAMRVTPLGGLGEVGRNMTVFELG----GKLLIVDCGVLFPEEDQPGVDLILPDFSS 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++A+ +TH HEDH G + L +P+ S + +EAK R+ + Sbjct: 69 IEHRIDDVVALVLTHGHEDHIGGVPYLLRLRDDIPLVGSELTLAFVEAKLKEHRIRPVLR 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++V G F +E V VNHSIP+ MA++IR+ GN++ TGD+K+D I G +TD Sbjct: 129 QVI--EHEEVSYGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 S G EG+ DSTNA G E I + + ++ ++ G ++V +F+S V R Sbjct: 187 LRSFARFGEEGVDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIVVASFASHVHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++D A R++ L+G S+ R + +A + G +K + + P + +++ Sbjct: 247 VQQVLDAAALHDRRVALVGRSMVRNMGIAAERGYLKVPAGVLIDARDITSLPPHERVLMV 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ E R+V + DTVIF+S IPGNE ++ + N+L+ G RV+ Sbjct: 307 TGSQGEPMAALSRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + VHVSGH +L +Y ++P+ ++ IHGE HLVA+ LA++ GIA V Sbjct: 367 QG-NAKVHVSGHASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGIAPERVMLC 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DN 475 +G + L I +V G DG +G+ + + RR L+ G +SV ++ Sbjct: 426 EDGVAVDLEGGVARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETT 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P I G+ D +I + + + + + D L++ + L Sbjct: 486 TGTILAGPHIQARGVAEDDSVFEEILPDVTEALSAALET----GKADAYSLQQVMRRTLG 541 Query: 536 SLLKKVWGKKPLVTVFINK 554 + + ++P++ + + Sbjct: 542 RWIGRRLRRRPMIVPVVIE 560 >gi|162447175|ref|YP_001620307.1| metallo-beta-lactamase superfamily protein [Acholeplasma laidlawii PG-8A] gi|161985282|gb|ABX80931.1| metallo-beta-lactamase superfamily protein [Acholeplasma laidlawii PG-8A] Length = 560 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 171/560 (30%), Positives = 280/560 (50%), Gaps = 11/560 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ LGG+GE+G N +Y + + ++D G+ FP DDL G+D V PD T+ Sbjct: 7 LKTGEIGVFALGGLGEVGKNTYVYEI----NNQIFVVDAGILFPDDDLLGIDYVIPDYTY 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + + ++ +FITH HEDH G + L + +P +YAS A+ L+E K + + Sbjct: 63 LKENEDRIVGLFITHGHEDHIGGIPYLLRQVKIPRIYASGIAVDLIEYKLGEHKDLRAPK 122 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ + + +R+NHSIP+ +V R+P G + HTGD+K+D + + Sbjct: 123 IEEYKSYYTYNFKDVVVSFIRLNHSIPDMFGIVFRTPEGPLFHTGDFKIDYTPVGP-HAE 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L +G EG L L+ DSTNA ++G SE + ++I ++ G +++ TF+S++ R Sbjct: 182 YEKLANLGQEGTLLLVSDSTNAEQDGLIQSESKVGRSINELFTRIPGRIIIATFASNLYR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS-DESFGLYPREQLIVIA 298 I+ II+ AE GRKI + G S++R + G IK + + E Y E+ ++ Sbjct: 242 IQQIIEAAELTGRKIAVFGRSMERTIEAGQQSGYIKPKKGTIVGPEELKKYTLEETCILV 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R +K + DTVIFSS IPGN+ I N L V VI Sbjct: 302 TGSQGEPLAALSRIANGSHRQIKTVKGDTVIFSSSPIPGNQDPINKTINLLFRNDVNVIT 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 H SGH DLK M ++P+ + +HGE L HK+LA++ G+ + + Sbjct: 362 HGPITDTHTSGHGSGPDLKLMLTLVKPKHFIPMHGEHRMLKRHKQLAVECGVDPNNILIM 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L + I +V G DG IG + +R+ LS G SV + +D Sbjct: 422 DNGDVAALNKESIRYAGKVQAGDIYIDGTGIGNIGSNVLRERKILSEEGLFSVILSIDLE 481 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P ++ G Y ++ L V + + + L++ I L Sbjct: 482 TKTLINEPTVISRGF-IYMKGNEELTSSLASMVKHITLRELPKKSYNELNLKQMIIDQLS 540 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + +KP++ I I Sbjct: 541 DKIYDITLRKPMILPIIMNI 560 >gi|308234840|ref|ZP_07665577.1| hypothetical protein GvagA14_01229 [Gardnerella vaginalis ATCC 14018] gi|311115075|ref|YP_003986296.1| metallo-beta-lactamase [Gardnerella vaginalis ATCC 14019] gi|310946569|gb|ADP39273.1| metallo-beta-lactamase [Gardnerella vaginalis ATCC 14019] Length = 659 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 295/562 (52%), Gaps = 16/562 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 106 RKGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFHYI 161 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + A+ +TH HEDH G + L +P+ S + +EAK R++ K+ Sbjct: 162 QNRLDKVDALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLAFVEAKCAEHRINPKMIH 221 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + DK+ +G F++E + V HSIP+ +A+ +++P G ++ TGD KLD + +TD Sbjct: 222 VEGR--DKLKIGPFNLEFISVTHSIPDALAVCVKTPAGTLIDTGDIKLDQLPLDHRLTDL 279 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +GI LM DSTNA G E I + A ++V +FSS V R+ Sbjct: 280 VEFGKLGEQGIDLLMADSTNAEVPGFVKPETTIGPALDRAFAEATRKIIVASFSSHVHRV 339 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + ++D A + GRK+V +G S+ R +S+A D+G + + + + ++L+ + T Sbjct: 340 QQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLHIPENTVVDLKQAKDIQDDKLVYMCT 399 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL +++ G +++ + E DTVI +S IPGNE + + N+LV+ G RVI Sbjct: 400 GSQGEPMAALGRIADGIHKDITVNELDTVILASSLIPGNEHEVYKVINKLVQMGARVI-N 458 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +HVSGH +L +Y ++P+ + IHGE HLVA+ +A++ G+ V Sbjct: 459 KDNAAIHVSGHCNEGELLYLYNIVKPKCAMPIHGEHRHLVANGSIAVKTGVDPKNVVLAE 518 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G ++ L+ ++ V G DG +G+ D + KRR L G +S ++++ Sbjct: 519 DGDVVDLYHGNAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFIVVNTDS 578 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 ++ P+I + + D + + ++ + D KD L++ + L S Sbjct: 579 ADVVAGPKIYLNAVAEDESD----FEKVRSQIVFQLQDAMMHGEKDTYKLQQIMRRTLGS 634 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 + + +KP++ + IS Sbjct: 635 WIARALRRKPMIVPVVANISEN 656 >gi|317153877|ref|YP_004121925.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] gi|316944128|gb|ADU63179.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] Length = 552 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 184/555 (33%), Positives = 290/555 (52%), Gaps = 14/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F PLGG+GEIGMN + + R +++DCG+ FP+D GVD+V P F++K + Sbjct: 7 LTFYPLGGLGEIGMNCMAF----KTERSMVLVDCGLMFPEDYHFGVDVVIPCFDFVLKNK 62 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I +TH HEDH GAL L L VPVY S F +GL+E K +++ + + Sbjct: 63 AILNGIVLTHGHEDHIGALPWLLQNLDVPVYGSQFTLGLVENKLREHDLARWADLRTVRP 122 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D+V +G F+ V HSI E L I +PVG +VHTGD+K+D + + G TD + Sbjct: 123 YDRVLLGDFTFNFFPVCHSIIEGFGLGIETPVGRVVHTGDFKIDRNPMGGHATDLAAFRR 182 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G+ ++ DSTN REG ++E+ IK ++ +I AKG +LV+ FSS + RI+ + D Sbjct: 183 FSEPGVRLMLSDSTNVGREGFALTEREIKVSLREIFSTAKGRILVSLFSSHIQRIQEVFD 242 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A+ GRK+ + G SL R + +A D+G +K +++ + + L+++ TGSQGE Sbjct: 243 LADAEGRKVAVSGKSLVRNIELARDLGYLKIPKGIYIELDRLDEFGDSDLVLLITGSQGE 302 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ GE R + + +D I SSR IPGN AI + N L G V+ E Sbjct: 303 PLAALSRMALGEHRQITVKPEDLYILSSRFIPGNVRAITRVINNLYRLGAEVLYEKMHG- 361 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK---M 421 VH SGH + +L M + +RP+ + +HGE HLV H LA+ G+ + + Sbjct: 362 VHASGHAHAGELTLMLETVRPRYFIPVHGEYRHLVKHSRLAVDCGVEESCALVVEDGQPV 421 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + + + L DG +G + +R+ L+ G + V +++D I Sbjct: 422 IFEADGSMRMGQPFRAEKILVDGKGVGDVGQSVLRERQLLAGEGMVIVVLVVDEATGEIS 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I+ G ++ + V+ ++ D L+E I SALR +K Sbjct: 482 MGPDIMSKGF-IFEQQYMHLLDDAKCIVLDVHENIAPG---DTAKLKERIRSALRRFFRK 537 Query: 541 VWGKKPLVTVFINKI 555 V G+ P+V + I Sbjct: 538 VLGRDPVVVPLVITI 552 >gi|227544435|ref|ZP_03974484.1| metallo-beta-lactamase [Lactobacillus reuteri CF48-3A] gi|300908282|ref|ZP_07125747.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] gi|227185598|gb|EEI65669.1| metallo-beta-lactamase [Lactobacillus reuteri CF48-3A] gi|300894529|gb|EFK87886.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] Length = 628 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 16 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIVIDCGVLFPEDELLGVDYVIQNYDY 71 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 72 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRNAEL 131 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 132 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGNLPGPN 191 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G++G+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 192 LQQMAKLGDDGVLLLTSDSTNAERPEFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 251 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + YP E+++++ Sbjct: 252 LREASDAAIAQGRKIAVFGRSMENAITAGQELGYLNIPKDSLIDQNEINNYPPEKVLIMC 311 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 312 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 372 GYVN-NIHTSGHGGQVDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAEMTGVPKENSFVL 430 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + DG G + I +RR LS G ++ ++D Sbjct: 431 ANGDVLALTKDSCRVADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 490 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D ++L +I S Sbjct: 491 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHVDQRVLNRTIISR 550 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 551 LQKLLYDRTGRRPVIIPMVTILNGN 575 >gi|269793946|ref|YP_003313401.1| metallo-beta-lactamase superfamily hydrolase [Sanguibacter keddieii DSM 10542] gi|269096131|gb|ACZ20567.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Sanguibacter keddieii DSM 10542] Length = 556 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 173/553 (31%), Positives = 298/553 (53%), Gaps = 17/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+G NM ++ + K +++DCGV FP++ PG+D++ P+ T+I Sbjct: 14 LRIVPLGGLGEVGRNMTVFEH----EGKLLIVDCGVLFPEEHQPGIDVILPEFTWIRDRL 69 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K+++AI +TH HEDH G + L +PV S + + AK R+ + I + Sbjct: 70 KDVVAIVLTHGHEDHIGGVPYLLKERADIPVIGSKLTLAFISAKLKEHRIRPRT--IEVE 127 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 AG G F +E + VNHSIP+ +A+ IR+ G +++TGD+K+D + +TD + Sbjct: 128 AGGSSKQGPFDLEFIAVNHSIPDALAVAIRTRAGLVINTGDFKMDQFPLDSRITDLNHFA 187 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG+ M DSTNA G +SE+ + I + + A V+V++F+S V RI+ I+ Sbjct: 188 RLGEEGVDLFMTDSTNAEVPGFTMSEQDLVPAIEQVFRTAPRRVIVSSFASHVHRIQQIL 247 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+ +G S+ R + +A ++G +K L + + P E++ ++ TGSQG Sbjct: 248 DSAHEAGRKVAFVGRSMVRNMGIAEELGYLKIPRGLVVDLKKLESMPPEKICLVCTGSQG 307 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL+++++ E +K+ E DTV+ +S IPGNE AI + N L + G ++ + Sbjct: 308 EPMAALSRMAKSEHV-IKVGEGDTVLLASSLIPGNENAIYRVINSLTDLGATIVHKG-NA 365 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH +L Y ++P+ ++ IHGE HL A+ LA + G+ V ++G + Sbjct: 366 KVHVSGHASAGELVYCYNIVKPRNVMPIHGESKHLRANGALAEKTGVPSNNVVIAQDGTV 425 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + L + I+ +V G DG +G + +A+RR L G ++V L+D + Sbjct: 426 VDLVKGKLSIVGKVPAGYVYVDGQTVGTATEDTLAERRALGSKGIVTVLALVDLDLGVLA 485 Query: 482 V-PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE + G G + + + +P+ D+ L +I+ ++ L++ Sbjct: 486 ETPEFITRGFV----HDGHTFDDAVVEIEKALAQIPKKDVGDIDRLEATIAKSVARWLQR 541 Query: 541 VWGKKPLVTVFIN 553 + ++PLV + Sbjct: 542 KYRREPLVNAIVV 554 >gi|329769814|ref|ZP_08261215.1| ribonuclease J 1 [Gemella sanguinis M325] gi|328838176|gb|EGF87794.1| ribonuclease J 1 [Gemella sanguinis M325] Length = 556 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 167/559 (29%), Positives = 287/559 (51%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + ++ID GV FP D++ G+D V PD ++ Sbjct: 5 IKKNEVGVAAIGGLGEIGKNTYAIQY----RDEIVIIDAGVKFPGDNILGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K + A+ ITH HEDH G L L + +P+Y P AIGL+ +K + + Sbjct: 61 IEKNIDKIKALIITHGHEDHIGGLPFLLRKVSLPIYGGPLAIGLIRSKLEEHNLLGRAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ + HSIP++ +++ +P GNIVHTGD+K D + T+ Sbjct: 121 NVIDEDTVLEYKYLKVSFHNTTHSIPDSYGVIVGTPQGNIVHTGDFKFDFTPVG-QGTNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + AIG++G+L L+ DSTN+ R SEK + K I +I++ K V+ TF+S+V R+ Sbjct: 180 HKMAAIGDKGVLCLLSDSTNSERSEFTQSEKEVGKTISNILRKEKHRVIFATFASNVYRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + GRKIV+ G S+++ + + ++G IK F++ + +L+++ T Sbjct: 240 KQVVEACIEHGRKIVVFGRSMEKAIKIGTELGYIKAPKDTFVNSKYLNQVDPNKLLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGE +AL++++ G + + + DTVIF+S AIPGN ++I + L + G VI Sbjct: 300 GTQGEELAALSRIANGTHKKITIMPTDTVIFASSAIPGNTLSINKNIDLLSKLGANVITS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M++ I+P+ + IHGE V H + A + I + Sbjct: 360 SVN-NVHTSGHGSKEEQKLMFRLIKPKYFMPIHGEYRMQVIHAQTAAECDIPLENSFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG +L L D I + DG IG + I R++LS G + V+V +D + Sbjct: 419 NGDVLALTSDSARIAGKFDASDVYVDGLGIGDIGSVVIKDRKELSEEGVVVVSVAIDFAN 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P+++ G + + ++ + T V+D + + +R+ I +L Sbjct: 479 RKLLNNPDVISRGFVNIN-ESMELFAECKAIIKTAVLDALKEENTGVYHMRQCIVESLGE 537 Query: 537 LLKKVWGKKPLVTVFINKI 555 L+ G+KP++ I ++ Sbjct: 538 FLENEIGRKPVILPTILEV 556 >gi|242278739|ref|YP_002990868.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] gi|242121633|gb|ACS79329.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] Length = 567 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 180/559 (32%), Positives = 295/559 (52%), Gaps = 13/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + +L PLGG+GEIG+N + ++ +++DCG+ FP D L GVD+ P Sbjct: 1 MSDPQLTVCPLGGLGEIGLNCMML----STAETAVVVDCGLIFPDDALFGVDIAIPRFDH 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + L I +TH HEDH GAL L ++ VPVY S F +GL+E K + + Sbjct: 57 ILTMKDTLKGIVLTHGHEDHIGALPWLLPYIDVPVYGSKFTLGLVENKLREHNLEDYVDL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D++ +G + V HSI E AL I +PVG ++HTGD+K+D + + G TD Sbjct: 117 RVVNPHDRIQLGDMAFNFFPVCHSIIEGYALGIETPVGRVIHTGDFKIDRNPLDGHATDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +++ G+ L DSTN ++G ++E IK + D+ A+G +LVT FSS + R+ Sbjct: 177 EAISKFSEPGVTLLFSDSTNVEQDGYALTENEIKNTMRDLFIEAEGRILVTLFSSHIQRM 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 + I D+A + RK+ + G SL R + +A D+G ++ + E Y ++++++ T Sbjct: 237 QEIFDLAVESKRKVGVSGKSLARNIELARDLGKLRFPGGTLIDLEDLPDYRDDEIVLLVT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE ++L++LS G+ R + + E D V+ SSR IPGN AI + NRL + G V+ E Sbjct: 297 GSQGESLASLSRLSTGDHRQLSIKEGDLVLMSSRFIPGNTKAITRVINRLYKLGAEVLYE 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVR 417 + +H SGH + +L+ M + +RP+ + +HGE HL+ H LA++ G+A + Sbjct: 357 KVQG-IHASGHAHREELRTMLETVRPKYFIPVHGEYRHLIKHSRLAVETGVAPERSLVIE 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 +G+ + I + V L DG +G + +R+ L+ G + V +++D N Sbjct: 416 DGEPVTFLLHGIRFEENVPVQCTLVDGKGVGDVGQTVLKERQLLAGEGLVIVALVVDVNT 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I PE+ G ++ + + V+ ++P L+E I SALR Sbjct: 476 GEILRGPEVTSKGF-VFEQQYSHLLEDAKCIVLDVFENIPPGHT---NKLKERIRSALRR 531 Query: 537 LLKKVWGKKPLVTVFINKI 555 +KV G+ P+V + I Sbjct: 532 FFRKVLGRDPVVIPLVISI 550 >gi|28493582|ref|NP_787743.1| hypothetical protein TWT615 [Tropheryma whipplei str. Twist] gi|28572778|ref|NP_789558.1| hypothetical protein TW632 [Tropheryma whipplei TW08/27] gi|28410911|emb|CAD67296.1| conserved hypothetical protein [Tropheryma whipplei TW08/27] gi|28476624|gb|AAO44712.1| unknown [Tropheryma whipplei str. Twist] Length = 545 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 280/555 (50%), Gaps = 19/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+G NM ++ + +++DCGV FP PGVDL+ PD I Sbjct: 5 LRLMPLGGLGEVGRNMTVFE----LDGRILLVDCGVLFPDLQQPGVDLILPDFAPIRDRL 60 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ +TH HEDH GA+ L +P+ SP + +E K +R+S + + Sbjct: 61 DKVEALVLTHGHEDHIGAVPYLLRLRSDIPLIGSPLTLAFVEEKCKEQRLSPNLRRV--A 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D++ VG F +E V VNHSIP+ MA+ IR+ GNI HTGD+KLD + +TD S Sbjct: 119 PLDRLKVGDFDLEFVSVNHSIPDAMAVFIRTSAGNIFHTGDFKLDQWPLDSRLTDLPSFA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG+ MCDSTNA G E+ I + ++ +G +V FSS V+R++ ++ Sbjct: 179 RFGAEGVDLFMCDSTNADIAGYIPYERDIGPVLDSLIAKTEGRAIVACFSSHVARVQQVL 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + A R++ LLG S+ R +S+A +G ++ D + + P ++++ + TGSQG Sbjct: 239 NAAAANNRQVALLGRSMIRNMSIAAQLGFLQVPDGVLIDAAIAETLPYDRVVYVCTGSQG 298 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP + L++++ G + D VIF+S IPGNE ++ + ++L + G V + Sbjct: 299 EPLAVLSRMADGTF-QIVPGPGDRVIFASSLIPGNESSVYKLMDKLYDLGAEVSHKG-NA 356 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKM 421 VHVSGH +L Y ++P+ + IHGE HLVA+K +A + V NG + Sbjct: 357 FVHVSGHCASGELLYCYNILKPKFAMPIHGERRHLVANKRVAEKSGMSSDSVILASNGTV 416 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 ++L ++D+V L DG I D + R LS G +S+ V+++ I Sbjct: 417 VQLDDSGARVVDQVDIELVYVDGNNI--VTDRELKDRLALSEDGFISITVVVNKDSGEIV 474 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G +G ++ + ++ V++ + D L + + S + Sbjct: 475 STPHIYTRGFA----EGYEVFEDVVNEVVSELKHAIGSGVLDEHDLTRIVRRVVGSWAGR 530 Query: 541 VWGKKPLVTVFINKI 555 + P++ + + Sbjct: 531 KIRRHPVIVPLVVTV 545 >gi|227363853|ref|ZP_03847958.1| metallo-beta-lactamase [Lactobacillus reuteri MM2-3] gi|325683063|ref|ZP_08162579.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|227071080|gb|EEI09398.1| metallo-beta-lactamase [Lactobacillus reuteri MM2-3] gi|324977413|gb|EGC14364.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 628 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 279/565 (49%), Gaps = 12/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN E+ F +GG+GEIG NM + + I+IDCGV FP+D+L GVD V + + Sbjct: 16 IKNNEVAFYAMGGLGEIGKNMYCVQF----QDEIIVIDCGVLFPEDELLGVDYVIQNYDY 71 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ + + IFITH HEDH G L ++ P+YA PFA+ L++ K + + + Sbjct: 72 LIENKDKIKGIFITHGHEDHIGGLPFFLQKVNAPIYAGPFAMSLIKGKLEEKHLLRNAEL 131 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTD 179 D+V + R HSIP+T+ + + +P G IV TGD+K D + + Sbjct: 132 HEINEFDEVHFKKLWVSFFRTTHSIPDTLGVAVHTPQGTIVQTGDFKFDLTPVGNLPGPN 191 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G++G+L L DSTNA R SE+ + +I I + KG ++ +F+S+V R Sbjct: 192 LQQMAKLGDDGVLLLTSDSTNAERPEFTKSERWVDIHIRRIFERIKGRIIFASFASNVYR 251 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 +R D A GRKI + G S++ ++ ++G + + YP E+++++ Sbjct: 252 LREASDAAIAQGRKIAVFGRSMENAITAGQELGYLNIPKDSLIDQNEINNYPPEKVLIMC 311 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ G R + + +DTV+FSS IPGN ++ + N+L E G VI Sbjct: 312 TGSQGEPMAALSRIANGTHRQITIQPEDTVVFSSNPIPGNTTSVNALINKLEESGANVIH 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH D + M + ++P+ +HGE H +LA G+ + Sbjct: 372 GYVN-NIHTSGHGGQVDEEFMLRLMKPKFFAPVHGEYRMQKIHTKLAEMTGVPKENSFVL 430 Query: 417 RNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGK-FADLGIAKRRQLSFVGHLSVNVLLD 474 NG +L L D + D + DG G + I +RR LS G ++ ++D Sbjct: 431 ANGDVLALTKDSCRVADHIDSVSDVYIDGRDAGDTVGNPEIRERRLLSEEGVVTAIAVVD 490 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 Y I P+IV G I + + + D ++L +I S Sbjct: 491 LKDYQIVAGPDIVSRGFVYMHESQELIKAANHEVFWAILNTFKNHKHIDQRVLNRTIISR 550 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L+ LL G++P++ + ++ Sbjct: 551 LQKLLYDRTGRRPVIIPMVTILNGN 575 >gi|320534651|ref|ZP_08035095.1| hypothetical protein HMPREF9057_03005 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133126|gb|EFW25630.1| hypothetical protein HMPREF9057_03005 [Actinomyces sp. oral taxon 171 str. F0337] Length = 544 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 170/554 (30%), Positives = 291/554 (52%), Gaps = 16/554 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GE+G NM ++ K +++DCGV FP++D PGVDL+ PD + I Sbjct: 1 MRITPLGGLGEVGRNMTVFE----LDGKLLIVDCGVLFPEEDQPGVDLILPDFSSIEHRI 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +++A+ +TH HEDH G + L +P+ S + +EAK R+ + +S Sbjct: 57 DDVVALVLTHGHEDHIGGVPYLLRLREDIPLVGSELTLAFVEAKLKEHRIRPVLRQVS-- 114 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++V G F +E V VNHSIP+ MA++IR+ GN++ TGD+K+D I G +TD S Sbjct: 115 EHEEVSYGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITDLRSFA 174 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG+ DSTNA G E I + + ++ ++ G ++V +F+S V R++ ++ Sbjct: 175 RFGEEGVDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIVVASFASHVHRVQQVL 234 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A R++ L+G S+ R + +A + G +K + + P + +++ TGSQG Sbjct: 235 DAAALHDRRVALVGRSMVRNMGIASERGYLKVPAGVLIDARDITSLPPHERVLMVTGSQG 294 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL++++ E R+V + DTVIF+S IPGNE ++ + N+L+ G RV+ + Sbjct: 295 EPMAALSRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVHQG-NA 353 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH +L +Y ++P+ ++ IHGE HLVA+ LA++ G+A V +G Sbjct: 354 KVHVSGHASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGVAPERVMLCEDGVA 413 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 + L I +V G DG +G+ + + RR L+ G +SV ++ I Sbjct: 414 VDLGGGVARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETTTGTIL 473 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ D +I + + + + + D L++ + L + + Sbjct: 474 AGPHIQARGVAEDDSVFEEILPDVTEALSAALET----GKADAYSLQQVMRRTLGRWIGR 529 Query: 541 VWGKKPLVTVFINK 554 ++P++ + + Sbjct: 530 RLRRRPMIVPVVIE 543 >gi|283456603|ref|YP_003361167.1| beta-lactamase domain-containing protein [Bifidobacterium dentium Bd1] gi|283103237|gb|ADB10343.1| Beta-lactamase domain-containing protein [Bifidobacterium dentium Bd1] Length = 558 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 292/558 (52%), Gaps = 16/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD +I Sbjct: 1 MRIVPLGGLGEIGRNMNVVEY----NGHLLLIDCGVLFPEEEQPGVDLILPDFHYIKDRL 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ +TH HEDH G + L +P+ S + EAK ++ + + + Sbjct: 57 DKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFAEAKCKEHHINPTL--VEVK 114 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 DK+ VG +++E V V HSIP+ +A+ +++P G+++ TGD KLD + +TD Sbjct: 115 GRDKLKVGPYNLEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFG 174 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+ LM DSTNA G E I + A ++V +FSS V R++ ++ Sbjct: 175 KLGEKGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRVQQVV 234 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A + GRK+V +G S+ R +S+A D+G ++ + + + ++L+ + TGSQG Sbjct: 235 DAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLKQSHDVQDDKLVYMCTGSQG 294 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL +++ G R++ + E DTVI +S IPGNE + + N+LV+ G RV+ Sbjct: 295 EPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHEVYKVINKLVQLGARVV-NRDNA 353 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH +L MY ++P+ + IHGE HLVA+ +A++ G+ V +G + Sbjct: 354 AVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIAVKTGVDPQNVVLAEDGDV 413 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIF 480 + L+ ++ V G DG +G+ D + KRR L G +S V++D ++ Sbjct: 414 VDLYHGQAAVVGSVPCGYVYVDGDSVGELTDEELEKRRILGTEGFVSSFVVVDTETADVI 473 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I + + + + ++ + D D L++ + L S + + Sbjct: 474 AGPKIYLNAVAEDESE----FDKVRHQIVEQLRDAMMTGTHDTYKLQQLMRRTLGSWVAR 529 Query: 541 VWGKKPLVTVFINKISRQ 558 +KP++ + I++ Sbjct: 530 QLHRKPMIVPVVADIAQD 547 >gi|57504574|ref|ZP_00370686.1| conserved hypothetical protein subfamily [Campylobacter coli RM2228] gi|57019469|gb|EAL56163.1| conserved hypothetical protein subfamily [Campylobacter coli RM2228] Length = 676 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 166/556 (29%), Positives = 289/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 124 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 179 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC- 120 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 180 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 239 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + ++G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 240 RPVEKRKVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 299 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 300 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 359 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 360 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 419 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 420 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 479 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M ++P+ + +HGE H+ HKE A++ GI + + Sbjct: 480 EF-SEIHVSGHASIEEQKLMLTLVKPKFFLPVHGEYNHINKHKETAIKCGIPEKNIYLMS 538 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G + L ++ I V G D + + AD + R++L+ G + + LD Sbjct: 539 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKAS 598 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + V++ D + L I LR Sbjct: 599 KTLINKPRVFSYGLVADKQDHA-FSKEMAEVLGQFFVNVKDEVLNDPRFLENQIRQVLRK 657 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 658 HIFRKIKKYPTIVPTI 673 >gi|16332072|ref|NP_442800.1| hypothetical protein slr0551 [Synechocystis sp. PCC 6803] gi|1723172|sp|P54123|RNJ_SYNY3 RecName: Full=Ribonuclease J; Short=RNase J gi|1001381|dbj|BAA10871.1| slr0551 [Synechocystis sp. PCC 6803] Length = 640 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 171/574 (29%), Positives = 306/574 (53%), Gaps = 26/574 (4%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L LPLGG+ EIG N ++ Y + +++D G++FP DD+ GV++V PD+T++ Sbjct: 6 QTQALKILPLGGLHEIGKNTCVFEY----DDEILLLDAGLAFPTDDMHGVNVVLPDMTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPC 120 + R+ + + +TH HEDH G + +P+ Y A+ LL K + ++ Sbjct: 62 RENREKIKGMVVTHGHEDHIGGIAYHLKQFDIPIIYGPRLAMALLRDKLEEAGMLERTNL 121 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + V +G F +E +R HSI ++ L I +P+G ++H+GD+K+D I G+ D Sbjct: 122 QTVSPREMVRLGKSFVVEFIRNTHSIADSYCLAIHTPLGVVMHSGDFKIDHTPIDGEFFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G +G+L L+ DSTNA G SE + N+ + A+G ++VTTF+SSV R Sbjct: 182 LQKVAEYGEKGVLCLLSDSTNAEVPGITPSEASVIPNLDRVFSQAEGRLMVTTFASSVHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ +A++ RK+ ++G S+ V++ A +G IK D LF+ ++ P +Q +++ Sbjct: 242 VNIILSLAQKHQRKVAVVGRSMLNVIAHARKLGYIKCPDNLFVPLKAARNLPDQQQLILT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +A+ ++S GE +K+ + DTV+FS+ IPGN +A+ + +RL+ QG VI Sbjct: 302 TGSQGEPLAAMTRISNGEHPQIKIRQGDTVVFSANPIPGNTIAVVNTIDRLMMQGANVIY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K + RP+ V +HGE LV H ++A +GI + V Sbjct: 362 GKHQG-IHVSGHASQEEHKMLLALTRPKFFVPVHGEHRMLVKHSQMAQAQGIPSENIVIV 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L D I + +V G+ L D I + +A+R+Q++ G ++V L Sbjct: 421 NNGDVIELTGDRIRVAGQVPSGIELVDQAGI--VHESTMAERQQMAEDGLVTVAAALSKT 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD--------LPQFRRKDLKLLRE 528 + PE+ G+ + +L+++T+ + + L++ Sbjct: 479 GTLLAYPEVHCRGV-VMTIQPKLLEELIVRTIENFLTERWSEFTHGSNGSTEVSWNALQK 537 Query: 529 SISSALRSLLKKVWGKKPLVTVFI-----NKISR 557 + S+L+ L+K+ P+V + + ++ + Sbjct: 538 ELESSLQRLIKRELQSSPMVLLMLQTDTPIELDQ 571 >gi|314933286|ref|ZP_07840651.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] gi|313653436|gb|EFS17193.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] Length = 518 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 162/523 (30%), Positives = 266/523 (50%), Gaps = 13/523 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK + E+ LGG+GE+G N Y + ++ID G+ FP D+L G+D V PD Sbjct: 1 MKQLHSNEVGVYALGGLGEVGKNTYAIEY----KNEIVIIDAGIKFPDDNLLGIDYVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 T++ + + ++ +FITH HEDH G + L ++VP+Y P A+GL+ K + + Sbjct: 57 YTYLEQNQDKIVGLFITHGHEDHIGGVPFLLKQINVPIYGGPLALGLIRNKLEEHHLLRT 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + F I HSIPE +++ +P G IVHTGD+K D + + Sbjct: 117 TELHEIDESSVIKSKHFEISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVG-EP 175 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + +G EG+L L+ DSTN++ +SE+ + +N+ I +N KG ++ TF+S++ Sbjct: 176 ANIAKMAKLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNI 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ ++ A + RKIV G S++ + + +++G IK + F+ P+ +L++ Sbjct: 236 YRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGEP +AL++++ G + +K+ +DTV+FSS IPGN +I N L + G V Sbjct: 296 LCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYKAGADV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 I +H SGH D + M + I+P+ + IHGE L AH + ++ G+ V Sbjct: 356 IHSKI-SNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGVECGVDEDNVF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L L D + G L DG IG ++ I R+ LS G + V V +D Sbjct: 415 IFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSKEGLVIVVVSID 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLP 516 N + P+I+ G G I+ K + L Sbjct: 475 FNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLN 517 >gi|315641462|ref|ZP_07896534.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482750|gb|EFU73274.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 562 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 149/557 (26%), Positives = 265/557 (47%), Gaps = 13/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGGV E G NM + G ++DCG+ +P+++L G+D V PD +++ + Sbjct: 5 DDIKLIPLGGVRENGKNMYVAEVG----EDIFVLDCGLRYPENELLGIDTVIPDFSYLEE 60 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 + + +F+TH H D GAL + VPV+ + + L + +KK Sbjct: 61 NAERVAGVFLTHGHADAIGALPYFLERVPVPVFGTKLTVELAKMIVHRNEATKKYKEFHV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G ++ R HSIPE++ + +++ GNIV+TGD+K D A+ TD Sbjct: 121 IDEHTEIDFGTTTVSFFRTTHSIPESVGISLKTEAGNIVYTGDFKFDQAAVPMYQTDFAR 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ STNA SE I + D +K +G ++V +S++ R++ Sbjct: 181 LAEIGREGVLALLSTSTNAENPAQVASEAKIADEVTDTIKYWEGRIIVACVASNLQRVQQ 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATG 300 I+D + GRK+VL G +++ A+ +G + + LF++ + Y QL+++ TG Sbjct: 241 ILDASVVSGRKVVLTGQDFGKIIRTAMKLGSLTLPDEDLFITQKEMKNYDANQLLILETG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ G R +++ E D V ++ E + ++ + G V Sbjct: 301 RMGEPIKSLQKMANGTHRTLRIQEGDLVYITTTPTIAMETVVAKTEDMVYRAGGNVKNIS 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VSGH P+DL+ M ++P L+ + GE +VAH +LA + GI V + Sbjct: 361 DNFR--VSGHANPSDLQLMLNLLKPTYLLPVQGEFRQMVAHADLAKEIGIAEDHVFLLAK 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L +++ V + DG +G ++ + R+ LS G V ++ Sbjct: 419 GDVLVYANGTMQLAGTVPADNIMIDGIGVGDIGNIVLRDRKVLSEDGIFIAVVTINRREK 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V V Q + L++ I L Sbjct: 479 RIVSKPQITSRGF-VYVKASRDLIRESGEMVSEIVAKHLQDEEFEWAKLKQDIRDQLSRY 537 Query: 538 LKKVWGKKPLVTVFINK 554 L + ++P++ I + Sbjct: 538 LFEQTKRRPVILPVIME 554 >gi|332185948|ref|ZP_08387695.1| RNA-metabolising metallo-beta-lactamase family protein [Sphingomonas sp. S17] gi|332014306|gb|EGI56364.1| RNA-metabolising metallo-beta-lactamase family protein [Sphingomonas sp. S17] Length = 544 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 199/552 (36%), Positives = 313/552 (56%), Gaps = 12/552 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL+F LGG GEIGMN+ LYG + KW+M+DCG++F PG+D++ PD++FI Sbjct: 4 KKELLFCALGGSGEIGMNVNLYG----TEGKWVMVDCGITFADPAYPGIDVILPDLSFIE 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +L+ I +TH HEDH GAL L L VP+YA+ F GL+ K E + ++ Sbjct: 60 DRLDDLVGIVLTHGHEDHIGALPYLAEDLGVPIYATAFTAGLVRGKLEEEGSANRVKLRV 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G +VG F V ++HSIPE AL+I + VG + HTGDWKLD ++G Sbjct: 120 IEPGKAFEVGPFDFTFVPLSHSIPEANALLIETAVGRVFHTGDWKLDQTPVIGKPASPAQ 179 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L +IG+ G+ L+CDSTNA SE ++ I + + AKG V+VTTF+S+ +R+ + Sbjct: 180 LASIGDRGVDILVCDSTNAFNTEASGSEASVRPGIAETVAKAKGRVVVTTFASNAARLVT 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + ++A++ GRK+ + G SL R++ V G K + E+ P+++++++ATG Q Sbjct: 240 LGEVAKETGRKLCVTGRSLDRILKVGKACGYFKGFPETVDPETAMRLPKDRVLIVATGGQ 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+AL++++ G ++L DTVIFS+R IPGNE A+G I+N L +GVR++ E + Sbjct: 300 GEPRAALSRIAEGSH-TIRLDTGDTVIFSARQIPGNETAVGRIQNILAGKGVRMVTER-Q 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP +L +MY+W+RP+ L+ +HGE H++ H A +G+ +G ++ Sbjct: 358 AHVHVSGHPGQPELAQMYKWLRPRTLMPVHGEMRHMMEHARFATTQGVPQTIVQSDGDIV 417 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 RL P I + G + DG +I + +RR+L+ G +SV V + + G Sbjct: 418 RLLPGNATKIGQAPVGRLVLDGDVILPSDGSTMNERRKLAINGQISVGVAV-AKGRLVGS 476 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P++ G+P D + + R+ LRE I ++R + + Sbjct: 477 PQVRVQGVPVEDE-----RDAFIAEAVAAAAKAVDGPRRATDKLREDIRLSVRKVATRWT 531 Query: 543 GKKPLVTVFINK 554 GKKP+V V + + Sbjct: 532 GKKPIVDVLLIE 543 >gi|284052031|ref|ZP_06382241.1| beta-lactamase domain-containing protein [Arthrospira platensis str. Paraca] Length = 632 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 175/568 (30%), Positives = 297/568 (52%), Gaps = 22/568 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ Sbjct: 38 NSPKLKIIPLGGLHEIGKNTCVFEY----EDEIIILDAGLAFPTDGMHGVNIVLPDVTYL 93 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + +P +Y A+ LL K VS + Sbjct: 94 RENRDKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLHGKLEEAGVSDRTEL 153 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V +G F +E +R HSI ++ + I +PVG ++H+GD+K+D + G+ D Sbjct: 154 RTVRPRDIVRIGKNFLVEYIRNTHSIADSFTVAINTPVGVVIHSGDFKVDHTPVDGEFFD 213 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+ L+ DSTNA G SE + N+ I+ A G VLVTTF+SSV R Sbjct: 214 FQRLAEYGEKGVHCLLSDSTNAEVPGFTPSEASVYPNLERIIATASGRVLVTTFASSVHR 273 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ IA+++GR + ++G S+ V++ + ++G IK D LF+ + P E+++++ Sbjct: 274 VNIILSIAQKLGRSVAVVGRSMLNVIAHSRNLGYIKCPDNLFIPLNAIRSLPDEKVLILT 333 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +A+ +++ G R + + + DT++FS+ IPGN +A+ + ++L+ QG VI Sbjct: 334 TGSQGEPLAAMTRIANGAHRQISIKQGDTIVFSANPIPGNTIAVVNTIDKLMMQGANVIY 393 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH D K M RP+ V +HGE LV H + A GI + + Sbjct: 394 GRHHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVQHSKTAKSMGIPPENMVII 452 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L + I + +V G+ D G D + +R+QL+ G ++V V + + Sbjct: 453 NNGDVVELTENSIRVGGKVPSGIEPVDSSRTGFVRDDVLKERQQLAEDGLITVAVAVSDE 512 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD----------LPQFRRKDLKLL 526 + PE G+ D + ++K + T+ D + + D + Sbjct: 513 GKLLATPETHLKGV-VMTADQAAFKQHIVKVIEATLSDRWSELSRSFGNGEGNQIDWVGV 571 Query: 527 RESISSALRSLLKKVWGKKPLVTVFINK 554 R I A+ LL++ PL V + + Sbjct: 572 RTEIERAIARLLRRELQSNPL-LVVLMQ 598 >gi|19704545|ref|NP_604107.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328424|ref|ZP_06870950.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714831|gb|AAL95406.1| Metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154498|gb|EFG95290.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 608 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 164/560 (29%), Positives = 278/560 (49%), Gaps = 14/560 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG+ E+G N + Y + I++D G FP ++LPG+DLV PD TF+ Sbjct: 55 DKMYVIPLGGLEEVGKNCTIIQY----KDEIIIVDAGAIFPDENLPGIDLVIPDYTFLEN 110 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + +F+TH HEDH G + L+ + +YA L+++K V K Sbjct: 111 NKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYAGKLTNALIKSKFENFGVKKALPKM 170 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + KV VG F++E V+V HSI ++ L +++P G++ TGD+K+D + + D Sbjct: 171 VEVGSRSKVSVGKYFTVEFVKVTHSIADSYCLSVKTPAGHVFLTGDFKIDLTPVDNEKVD 230 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +G EG+ ++ DSTN+ EG SE+ + + A G +++ F+S V R Sbjct: 231 FMRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATGRIVIAVFASHVHR 290 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ IID A RKI + G SL +V +A VG + L + S Y ++++++ Sbjct: 291 IQQIIDTAAHFKRKIAIDGRSLLKVFEIAPSVGRLTIPKNLLIPISSVDKYDDDEIVILC 350 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP +AL+++++ +++ L E DTVI SS IPGNE A+ N +++ V ++ Sbjct: 351 TGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTNINNILKYDVDLVF 410 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV-- 416 + +HVSGH + K M I P+ + +HGE L AH A++ G+ + Sbjct: 411 KKI-AGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAIETGVPKDKILLT 469 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG + + + +I +V G L DG +G I R+QLS G + V +D Sbjct: 470 QNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSEDGIVIVAYSIDKE 529 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PE+ G Y D K + + + +D L+ + L Sbjct: 530 TGKIVSGPEMSTKGFVYY-KDSEDTIKEAQDLLSKKINKNETYLGRDWADLKGHVRDLLS 588 Query: 536 SLLKKVWGKKPLVTVFINKI 555 + + P++ + +I Sbjct: 589 RFFYEKLKRNPIILPMLLEI 608 >gi|323697438|ref|ZP_08109350.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio sp. ND132] gi|323457370|gb|EGB13235.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio desulfuricans ND132] Length = 551 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 184/560 (32%), Positives = 291/560 (51%), Gaps = 14/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M PLGG+GEIGMN LY + + +M+DCG+ FP+D GVD+V P + Sbjct: 1 MAGTSFTLYPLGGLGEIGMNCMLYR----TEKSLVMVDCGLMFPEDYHFGVDVVIPCFDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +++ ++ L I +TH HEDH GAL L + VPVY S F +GL+E K + + Sbjct: 57 VLRNKRQLNGIVLTHGHEDHIGALPWLLQNVDVPVYGSEFTLGLVENKLKEHDLDRWADL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + D++ +G F V HSI E L I +P G +VHTGD+K+D + + G TD Sbjct: 117 RPVRPYDRLLLGDFRFNFFPVCHSIIEGFGLGIETPAGRVVHTGDFKIDRNPLGGHATDL 176 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +EG+ ++ DSTN EG ++E+ IK ++ +I AKG +LV+ FSS + RI Sbjct: 177 AAFRKFSDEGVRLMLSDSTNIGNEGFALTEREIKVSLREIFNTAKGRILVSLFSSHIQRI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I D+A+ GRK+ + G SL R + +A++ G +K F+ ++ Y QL+++ T Sbjct: 237 QEIFDLADAEGRKVAVSGKSLHRNIELALEQGHLKVPKGTFIELDALDEYGDSQLVLLVT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ GE R + + D I SSR IPGN AI + N L G V+ E Sbjct: 297 GSQGEPLAALSRIAMGEHRQLSVRPDDLFILSSRFIPGNVKAINRVINNLYRLGAEVLYE 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +H SGH + +L M Q +RP+ + +HGE HLV H+ LA+ G+ + Sbjct: 357 KMHG-IHASGHAHAGELTLMLQTVRPEYFIPVHGEYRHLVKHRRLAIDCGVDEDKAMVVE 415 Query: 420 K---MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 + +E++ + L DG +G + +R+ L+ G + V +++D Sbjct: 416 NGQPVTFFEDGSVEMMPRIAADKILVDGKGVGDVGQSVLKERQLLAGEGMVIVVLVVDEA 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I+ G ++ + V+ ++ D L+E I SALR Sbjct: 476 SGEISMGPDIMSKGF-VFEQQYMHLLDDAKCIVLDVHENIAPG---DTAKLKERIRSALR 531 Query: 536 SLLKKVWGKKPLVTVFINKI 555 +KV G+ P+V + I Sbjct: 532 RFFRKVLGRDPVVVPLVISI 551 >gi|227495160|ref|ZP_03925476.1| possible metal-dependent hydrolase [Actinomyces coleocanis DSM 15436] gi|226831612|gb|EEH63995.1| possible metal-dependent hydrolase [Actinomyces coleocanis DSM 15436] Length = 566 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 167/562 (29%), Positives = 290/562 (51%), Gaps = 15/562 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ L PLGG+G+IG NM ++ + + +++DCGV FP++ PGVDL+ PD T Sbjct: 14 LEKNVLRVTPLGGLGDIGRNMTVFEI----NGQLLLVDCGVLFPQEKHPGVDLILPDFTA 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I +++ + +TH HEDH GA+ L +P+Y I +E K R+ K Sbjct: 70 IEDRLDDVVGLILTHGHEDHIGAVPYLLKLREDIPIYGCELTIAFVEPKLDEHRI-KNAN 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 GD++ +G F E V V HSIP+ MA+ IR+ GN + TGD+K+D + G +TD Sbjct: 129 LNVIAEGDRITLGGFDCEFVSVTHSIPDAMAIFIRTVAGNALITGDFKMDQLPLDGRLTD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G EG+ + DSTNA G E+ I + ++ + ++G ++V +F+S V R Sbjct: 189 LRAFARFGEEGVDLFLVDSTNAEVPGFVTPEREIGPVLDNVFQQSQGQIVVASFASHVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ + D A GRK+ L+G S++R + +A ++G + + + +S + P Q + +A Sbjct: 249 VQQVFDAALLTGRKVALIGRSMERNMRIAQELGYLDIPEDVIVSAKEIIQLPDNQRVFMA 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++ GE R V + E DTVIF+S IPGNE ++ + N L G +V+ Sbjct: 309 TGSQGEPMAALGRIAAGEHRFVSVGENDTVIFASSLIPGNEHSVYRVINGLTLLGAKVVH 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y ++P+ ++ IHGE HLVA+ +LA G+ V Sbjct: 369 QA-NAKVHVSGHASAGELLYCYNILQPENVMPIHGEVRHLVANGKLAELTGVPKRNVILA 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G + L+ I+ DG +G ++ + RR L G +S+ ++D Sbjct: 428 LDGVSVDLYDGEATIVGATPCDYIYVDGKSVGDLSEDELESRRVLGSEGFISLYAVVDLE 487 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P I +G + + + V T +++ + ++++ A+ Sbjct: 488 SKTVVSGPTIKAVG----MAEDDSVFTEIFPAVETALLESLGVDEPNTYRCQQAMRRAIG 543 Query: 536 SLLKKVWGKKPLVTVFINKISR 557 + + + ++P++ + + Sbjct: 544 NWVARKLRRRPMIVPLVVDAAE 565 >gi|70726639|ref|YP_253553.1| hypothetical protein SH1638 [Staphylococcus haemolyticus JCSC1435] gi|123660058|sp|Q4L5X8|RNJ2_STAHJ RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|68447363|dbj|BAE04947.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 557 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 157/558 (28%), Positives = 278/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNDDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF++H HE GA+ + + PVY S + L++ V KK+ Sbjct: 63 IENKEKLKGIFLSHGHEHAIGAVSYILEQIDAPVYGSKLTLALVKENMKSRNVKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 TVNHDSVMRFKNVNITFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLQGHYTPDIK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ AL+ DST A + G E I+ +IYD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A ++ RK+ LG SL+ ++A +G L + G YP+ ++++IATG Sbjct: 243 QVLNTASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVGNYPKNEVVIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +GEP AL+Q+++ + R + + E D+V + A EV I N LV G +I Sbjct: 303 MEGEPIEALSQMAQQKHRIMNIEEGDSVYLAITASANMEVIIADTLNELVRAGAYII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANESGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVIHYDGKDMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELMKEAEDKVREIVEAGLQEKRIEWSDIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|305432595|ref|ZP_07401756.1| metallo-beta-lactamase [Campylobacter coli JV20] gi|304444306|gb|EFM36958.1| metallo-beta-lactamase [Campylobacter coli JV20] Length = 676 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 124 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 179 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 180 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 239 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 240 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 299 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 300 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 359 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 360 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 419 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 420 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 479 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 480 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 538 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G + L ++ I V G D + + AD + R++L+ G + + LD Sbjct: 539 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKAS 598 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + V++ D + L I LR Sbjct: 599 KTLINKPRVFSYGLVADKQDHA-FSKEMAEVLGQFFVNVKDEVLNDPRFLENQIRQVLRK 657 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 658 HIFRKIKKYPTIVPTI 673 >gi|315639328|ref|ZP_07894490.1| metallo-beta-lactamase [Campylobacter upsaliensis JV21] gi|315480654|gb|EFU71296.1| metallo-beta-lactamase [Campylobacter upsaliensis JV21] Length = 655 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 160/556 (28%), Positives = 286/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ ++ I+ID G+SFP + GVD++ PD ++ Sbjct: 103 SEHKIRITPLGGLGEIGGNISVFE----TNNDAIIIDLGMSFPDGTMHGVDIIIPDFDYV 158 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 159 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 218 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ +G F +E + + HSI + AL +++ G I+HTGD+K+D I G TD Sbjct: 219 RPVEKRRIYEIGEFEVEWIHITHSIIDASALAVKTRAGTIIHTGDFKIDQTPIDGYPTDL 278 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG++ L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 279 HRLAHYGEEGVMCLLSDSTNSYKEGYTKSESSVGPTFDQIFAKTKGRVIMSTFSSNIHRV 338 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 339 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 398 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 399 GSQGETMSALYRMATDEHKFIKIKPSDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 458 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M ++P+ + +HGE H+ HKE A++ GI + + Sbjct: 459 EF-SEIHVSGHASMEEQKLMLSLVKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 517 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + I+ + V G D + + AD + R++L+ G + + +D Sbjct: 518 DGDQVEVCQKYIKRVKTVKTGKIFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 577 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + D + L I + LR Sbjct: 578 KTLINKPRVFSYGLVADKHDHA-FSKEMADVLSVFFTNAKDEWFNDTRFLENQIRTVLRK 636 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + + Sbjct: 637 HIFRKIKKYPTIVPTL 652 >gi|110004336|emb|CAK98674.1| conserved hypothetical upf0036 protein [Spiroplasma citri] Length = 586 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 158/558 (28%), Positives = 275/558 (49%), Gaps = 13/558 (2%) Query: 3 NEEL--VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ LGG+ E+G N + + IM+D GV FP + GVD V P+ + Sbjct: 32 KNKIPTKVFALGGLEEVGKNTYCIEH----DEELIMLDAGVKFPSSTMLGVDAVIPNYNY 87 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIP 119 + + ++ + A+FITH HEDH G + L +++P +YA A L+ + ++ + Sbjct: 88 LKENQRKIKALFITHGHEDHIGGIPYLLREVNIPIIYAPRLAAALIRDRLKEAKLEQTTI 147 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + F I VNHSIP+ + + +P G +V TGD+K D + D Sbjct: 148 VKEVDNMSVIKTKNFKINFFAVNHSIPDAFGISVVTPNGKVVSTGDYKFDWTPLGHR-AD 206 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + +G EG++ LM DSTNA EG +E I +NI ++ AKG +L++TF+S+V R Sbjct: 207 IERMANMGQEGVMLLMADSTNAEVEGYTQTETKIIQNISELFVKAKGRILISTFASNVHR 266 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 I+ I++IA + GRKI++ G SL R++ + +G +K D+ F+ Y ++++I Sbjct: 267 IQHIVEIANKYGRKILVFGRSLDRIIKIIRQMGHLKISDKAFIKANDAKNYKDNEILIIC 326 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ + +++ + DTVIFSS IPGN+ + + N+LV G V Sbjct: 327 TGSQGEPMAALSRIANNQHQHISIIPGDTVIFSSSPIPGNQADVVRVINKLVRAGAIVQE 386 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH + K ++ ++P+ + +HG+ L H E A+ + V Sbjct: 387 NSPLNQIHTSGHASQEEQKLLFTLLKPKYFMPMHGDYRMLRQHGETAISVNVPKDNVFIC 446 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L I + DG + + R LS G ++V + +D+ Sbjct: 447 ANGDQIELLNGTAAIGKRIEAEAVYVDGKDLSGQTTAVVRDREILSKDGLIAVVISIDSQ 506 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 N + P I+ G Y + G I ++ V ++ + ++ L+ +I +L Sbjct: 507 NNQLLTPPRIISRG-SFYVKESGNIINESIRLATEAVNEVLKTQKPTFGALKNAIKQSLS 565 Query: 536 SLLKKVWGKKPLVTVFIN 553 + + + PL+ I Sbjct: 566 PFIYRYKRRNPLIIPVIL 583 >gi|220932388|ref|YP_002509296.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219993698|gb|ACL70301.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 556 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 172/559 (30%), Positives = 304/559 (54%), Gaps = 9/559 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ +PLGG EIG NM + S + I++D GV FP+DD G +L+ PDI+++++ Sbjct: 3 QKISIIPLGGCREIGNNMIVIE----SKKDIIILDSGVLFPEDDDFGYELIIPDISYLVE 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +K + I +H HEDH GA+ L ++ P++ + +GL+++K + + + Sbjct: 59 RKKKIRGIIFSHGHEDHIGAVPFLLERINPPLFGTDLTMGLIKSKLEDAGLIDRARLKTV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 K+ +G F ++ VNHSIP +A I++PVG IV+TGD+K D + TD L Sbjct: 119 NHRSKLILGDFELDFCHVNHSIPGAVATRIKTPVGYIVYTGDYKFDQTPVNTGQTDYQKL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G EGI L+ DSTNA REG +SE+ + +NI + K G ++V TFS+++ RI+ I Sbjct: 179 SDWGKEGIRVLLGDSTNAEREGHSLSERVVAQNIEEGFKLINGRIIVATFSTNIHRIQHI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I A + GRK+ + G S+ + VA D+G + L ++ + ++++ TGSQ Sbjct: 239 ISAARKTGRKVAVAGRSMFNTIQVAADLGYLDIPPGLLITLDEANKMEPGNIVLLMTGSQ 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL +LSRG+ R++++ DTV S+ IPGNE AIG+ NRL G VI Sbjct: 299 GEYGAALTRLSRGDHRDMEIKPGDTVFMSASPIPGNEKAIGNTINRLYSLGAEVIYNGML 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGK 420 +H SGH ++K M P LV +HGE HL H +LA Q + + NG+ Sbjct: 359 -DIHASGHACQEEIKLMINLTGPDYLVPVHGEFRHLFHHAQLARQAGVPVQNILIPDNGQ 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + +FP +++ +++ L +G+ + + +R++++ G++++ + ++ + + Sbjct: 418 KIDVFPKRVKMGNKIEVNKTLIEGYRVCDNGKEILGERKKMARQGYINILMFVNKNGELK 477 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I+ G + + D ++ K + + V + + R D L+ ++ + +L+ Sbjct: 478 NKPVIISRGFTS-NRDSRELLKKVKEKVQKLIEEFQNNRHGDPADLKSRVNYEVNNLIYD 536 Query: 541 VWGKKPLVTVFINKISRQR 559 + PL+T FI ++++ R Sbjct: 537 KLKRAPLITPFIIQVNQDR 555 >gi|257063778|ref|YP_003143450.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Slackia heliotrinireducens DSM 20476] gi|256791431|gb|ACV22101.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Slackia heliotrinireducens DSM 20476] Length = 644 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 189/561 (33%), Positives = 296/561 (52%), Gaps = 17/561 (3%) Query: 2 KNEEL-VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 K++ L +PLGG+ IG NM + G ++ID G+ FP D PGVDL+ PD T+ Sbjct: 94 KSDALMRIIPLGGLDGIGKNMTAFECG----DDMVLIDAGLMFPDDGHPGVDLILPDYTY 149 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKI 118 +++ L I +TH HEDH G+L L L VP+YA+ +GL+E K RV K Sbjct: 150 VLENEHKLRGILVTHGHEDHTGSLPYLMKDLSSKVPIYATKLTLGLIEGKFQEHRV--KA 207 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 AGD++ +G+F I+ VNHSIP + + ++SP GNI+HTGD+KLD I G T Sbjct: 208 RLQEIHAGDEIKLGSFVIDFFAVNHSIPGAVGVFLQSPAGNILHTGDFKLDQTPIDGIHT 267 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D ++ G+ ++ DSTNAM+ SE + K + I++NAKG V++ +F+S + Sbjct: 268 DFGAMARFSKIGVDLMLSDSTNAMKTTFTPSEAEVGKALRSIIENAKGRVIIASFASHIH 327 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVI 297 R++ I D A GRK+V+ G S+ + +A +G + +D + P ++++++ Sbjct: 328 RLQQIADAAVANGRKVVVTGRSMIQNTDIARRLGYLHIQDIDLIDAYDLKDMPADKVVIM 387 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL++++ GE R + + DTVI S+ +PGNE A+ + N L + G V Sbjct: 388 CTGSQGEPLSALSRIANGEHRTIDIDPGDTVIISATPVPGNEKAVTRVVNSLSKIGCEV- 446 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPP 415 + + VHVSGH +LK + +P+ + +HGE HL AH LA GI + Sbjct: 447 YDKSRAMVHVSGHAGSEELKIVMSIAKPKAFMPVHGEAAHLRAHARLAEAVGIPHDNIFV 506 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NG L L P + + V G+ DG +G +++R QLS G S++V +D Sbjct: 507 CDNGDTLELSPSGVRRGEPVESGIVYVDGLSVGDTTRDVLSERTQLSNSGLASISVAIDP 566 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 H G I GI GD ++ + + + + K L + + + Sbjct: 567 AHGRSCGDVIIEMKGI--TGGDVSELRAEAHDRIASALQRGMDKNERG-KSLEKHLRDTM 623 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 SLL + ++P+V V I ++ Sbjct: 624 YSLLWEKTKQRPIVIVSIIEV 644 >gi|222151115|ref|YP_002560269.1| hypothetical protein MCCL_0866 [Macrococcus caseolyticus JCSC5402] gi|222120238|dbj|BAH17573.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 557 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 161/558 (28%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +NE + PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI ++ Sbjct: 7 ENEHIKMTPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDVVIPDINYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF++H H D GAL + + + P+Y S I L++ + ++KKI Sbjct: 63 IENKARLKGIFLSHGHVDAIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIKYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ +HSIP+++ +VI + G IV+TG++K D D Sbjct: 123 TVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGAIVYTGEFKFDQSLSGSYRPDIT 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+ G+L L+ DST A + G E I+ +I D A G ++V+ ++S+ RI+ Sbjct: 183 KMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A + RK+ LG SL+ + A +G K+QL + + YP+ ++I+IATG Sbjct: 243 QVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP ALAQ++ + + + E DTV ++ EV +G N LV+ G +VI Sbjct: 303 TQGEPIEALAQMALNKHNILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVI--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H SGH +LK M ++P V + GE +AH +LA + G+ + + Sbjct: 361 TNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIAHAKLAAEAGVLPEHIFLLEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L + + ++V G L DG +G ++ + RR LS G V +D + Sbjct: 421 GDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + K + V V D + + +++ + L L Sbjct: 481 TIAAGPQIQSRGF-VYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LYEHTKRRPMIIPVISEI 557 >gi|330994069|ref|ZP_08317999.1| Ribonuclease J [Gluconacetobacter sp. SXCC-1] gi|329759015|gb|EGG75529.1| Ribonuclease J [Gluconacetobacter sp. SXCC-1] Length = 547 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 197/550 (35%), Positives = 315/550 (57%), Gaps = 9/550 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FLPLGG GEIGMN+ LY G W+ +DCG+ F +D P +++ PD FI + R Sbjct: 7 VSFLPLGGTGEIGMNLNLYRQG----ETWLAVDCGIGFSGNDTPEAEIILPDPVFIAERR 62 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K L + +THAHEDH GA+ LW L PVY +PFA +L K + +++P Sbjct: 63 KALAGLVVTHAHEDHLGAIAHLWPQLGCPVYVTPFAAAVLRRKLGEAGLVQQVPIHVIAP 122 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G VG F + V V HS+PE+ +LV+R+P G I+HTGDWK+D D +G TD ++ Sbjct: 123 GGAFTVGPFDLRFVSVTHSVPESQSLVLRTPQGIIIHTGDWKIDPDPQVGPPTDLETFAE 182 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G EG+LA++CDSTN EG SE +++ + ++ + +G + VT F+S+V+R+ ++ Sbjct: 183 LGREGVLAMVCDSTNVRTEGPSASEADVRREMTRLIASLEGRIAVTCFASNVARVETLAK 242 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A+ GR++ ++G SL+ + A + G + FLS++ P Q+++I TGSQGEP Sbjct: 243 AAQAAGRRVAVVGRSLRNLEVAARECGYLSDVPQFLSEQDANSVPDGQILLIVTGSQGEP 302 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 RSAL++++ N+ L E DTVI+SSR IPGNE A+ +++ L +GV VI + + V Sbjct: 303 RSALSRIASDTHPNISLGEGDTVIYSSRMIPGNEQAVIQVQDNLTRRGVHVITDK-DHLV 361 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 HVSGH D++R+Y +RP+ L+ +HGE HL A+ +A + I V + +G +L + Sbjct: 362 HVSGHATGGDVRRLYDLVRPRFLIPVHGEWRHLTANAAIAQELDIEPV-LLEDGDILDIR 420 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 D +EI D G + DG I +A RR++ F G + + +D+ + G P++ Sbjct: 421 ADGVEIGDTAPTGRLVLDGGRILPMNGGVLAARRRMLFNGMVLGSFAVDDEGYLIGDPKV 480 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 G+ + + + + + ++P R + RE+ +ALR L + K+ Sbjct: 481 SAPGLLDME---DPETQRVTEEFGNALDEIPDELRANDATFREAAKTALRRALGRKLQKR 537 Query: 546 PLVTVFINKI 555 PLV V + ++ Sbjct: 538 PLVDVHLLRV 547 >gi|300780981|ref|ZP_07090835.1| metallo-beta-lactamase superfamily protein [Corynebacterium genitalium ATCC 33030] gi|300532688|gb|EFK53749.1| metallo-beta-lactamase superfamily protein [Corynebacterium genitalium ATCC 33030] Length = 707 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 170/561 (30%), Positives = 290/561 (51%), Gaps = 15/561 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L LGG+ EIG NM ++ Y + + +++DCGV FP D PGVDL+ PD I Sbjct: 140 NGALRIYALGGISEIGRNMTVFEY----NGRLLIVDCGVLFPSSDEPGVDLILPDFGPIE 195 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+ +TH HEDH GA+ L +P+Y++ F L+ AK R K+ Sbjct: 196 NKLDKVDALVVTHGHEDHIGAIPWLLKLRPDIPIYSARFTNALIAAKTREHRQKPKL--H 253 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ G F++ RV HSIP+ + +VI++ G + TGD KLD TD Sbjct: 254 EVNEKSEITAGPFNLRFWRVGHSIPDCLGVVIKTGAGTVCMTGDIKLDMTPYDNKPTDLP 313 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L G+EGI +CDSTNA G SE GI++ + +++ AK V++ +F+S+VSR++ Sbjct: 314 ALARYGDEGIDLFLCDSTNATIPGISSSEAGIEETLIRLVQGAKQRVVLASFASNVSRVQ 373 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 I+ A GRK+ G S+ R + +A + ++K + E ++++I TG Sbjct: 374 MAINAAVASGRKVAFNGRSMIRNMEIAEKMSMLKAPRGTIIPIEEAAKMAPHRVMLITTG 433 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL+++SR E R + + + D +I SS IPGNE A+ + N L + G V+ + Sbjct: 434 TQGEPMAALSRMSRREHRQITVRDGDLIILSSSLIPGNEEAVFAVINNLAQIGATVVTNE 493 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ +N Sbjct: 494 -DAHVHASGHGYAGELLFLYNIARPRNAMPVHGEWRHLRANKELAIATGVKPENTVLAQN 552 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + I + + G DG +G +A R L+ G +S+ L+D+ Sbjct: 553 GVVVDMVDGKITVAGQYQVGHLYVDGTTMGDVDPDVLADRTSLASGGVISITCLIDDRTG 612 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 ++ P++ G+ D + ++ + V TT+ DL D + + + + Sbjct: 613 SLIEKPKVSTTGLIDDDR---GVVPVIQELVETTMSDLAAEGENDPYRMVQQLRRRISRT 669 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 +++ + ++P++ + ++ Sbjct: 670 IEQKYKREPVILPTVVPMNTD 690 >gi|67923141|ref|ZP_00516631.1| Conserved hypothetical protein MG423 [Crocosphaera watsonii WH 8501] gi|67855039|gb|EAM50308.1| Conserved hypothetical protein MG423 [Crocosphaera watsonii WH 8501] Length = 593 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 303/565 (53%), Gaps = 24/565 (4%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M + L +PLGG+ EIG N + Y + I++D G++FP D++ GV++V P Sbjct: 1 MSKTKQQPSLKIIPLGGLHEIGKNTCILEY----KEEIILVDAGIAFPTDEMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVS 115 D+T++ + R + + TH HEDH G + +P+ Y A+ L++ K +S Sbjct: 57 DMTYLRENRHKIKGMIATHGHEDHIGGIPHHLKQFDIPIIYGPKLAMALVKDKLDEAGLS 116 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + + V V FS+E +R HS+ ++ + I++P+G ++HTGD+K+D + Sbjct: 117 DRTKLQTVGPRETVKVSPSFSVEFIRNTHSMADSFTIAIQTPLGVVIHTGDFKIDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D L G +G+L L+ DSTNA G+ SE + N+ I+ A G +++TTF+ Sbjct: 177 GEHFDLQKLAEYGEKGVLCLLSDSTNAEVPGSTASESSVYPNLDRIIAQAGGRLMITTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV R+ I+ +A++ RK+ ++G S+ V++ A ++G +K D +F+S ++ P EQ Sbjct: 237 SSVHRVNIILQLAQKHKRKVAVVGRSMLNVIAHARELGYVKCPDDIFISLKAANNLPDEQ 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 +++++TGSQGEP +AL ++SRG R++K+ DT++FS+ IPGN +A+ + +RL+ QG Sbjct: 297 VLILSTGSQGEPLAALTRISRGAHRHLKVRPGDTIVFSANPIPGNTIAVVNTIDRLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 VI +HVSGH D K M RP+ V +HGE LV H E+ + G+ Sbjct: 357 ANVIYGRRHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVKHAEIGYKMGVPAD 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + + NG ++ L + I + +V G+ L D + + + R+QL+ G ++V Sbjct: 416 NIVIIDNGDIVELSTEKISVKGKVPSGIKLVDQAGV--VHEHVMQDRQQLAEDGVVTVAA 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-------DLPQFRRKDLK 524 + + PE+ G+ + + +L+++ + + + + + + Sbjct: 474 PISWEGKLITPPEVHLRGVVTKV-EPSLLKQLIIRAIENILENRWDEFSNSDRSAKVNWS 532 Query: 525 LLRESISSALRSLLKKVWGKKPLVT 549 L++ + L+ L+K+ PLV Sbjct: 533 YLQKEVEKTLQRLVKRELRSYPLVI 557 >gi|47569068|ref|ZP_00239757.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] gi|47554230|gb|EAL12592.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] Length = 510 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 153/512 (29%), Positives = 267/512 (52%), Gaps = 6/512 (1%) Query: 48 LPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 + G+D+V PDIT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ Sbjct: 1 MFGIDIVIPDITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQE 60 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 K + ++ + + V+ ++ HSIP+++ + + G IV+TGD+K Sbjct: 61 KLGEAGMLGRVDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFK 120 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D I D + IGNEG+L L+ DSTNA R G SEK + I + A+G Sbjct: 121 FDQTPIGNSGADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGR 180 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESF 286 ++V +F+S+V RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + Sbjct: 181 IIVASFASNVHRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLKEV 240 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 +P +++ ++ TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I Sbjct: 241 DNFPEKKVAILTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKII 300 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 + L G V+ E VHVSGH +LK M ++P+ V +HGE AH LA Sbjct: 301 DLLFRAGAEVVY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAE 359 Query: 407 QEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFV 464 GI + V G ++ D ++ +V G L DG +G ++ + R+ LS Sbjct: 360 DVGIARENIFIVEKGDVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQD 419 Query: 465 GHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 G L V V L I PEI+ G Y + + + V V + + Sbjct: 420 GILVVVVTLGKDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEW 478 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 +L+++I L L + +KP++ I ++ Sbjct: 479 SMLKQNIRELLGQFLYEETKRKPMILPIIMEV 510 >gi|222097243|ref|YP_002531300.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|221241301|gb|ACM14011.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] Length = 510 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 153/512 (29%), Positives = 267/512 (52%), Gaps = 6/512 (1%) Query: 48 LPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 + G+D+V PDIT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ Sbjct: 1 MFGIDIVIPDITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQE 60 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 K + ++ + + V+ ++ HSIP+++ + + G IV+TGD+K Sbjct: 61 KLGEAGMLGRVDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFK 120 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D I D + IGNEG+L L+ DSTNA R G SEK + I + A+G Sbjct: 121 FDQTPIGNSGADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGR 180 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESF 286 ++V +F+S+V RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + Sbjct: 181 IIVASFASNVHRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEV 240 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 +P +++ ++ TGSQGEP +AL+++++ + + + + DTVI ++ IPGNE+++ I Sbjct: 241 DNFPEKKVAILTTGSQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKII 300 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 + L G V+ E VHVSGH +LK M ++P+ V +HGE AH LA Sbjct: 301 DLLFRAGAEVVY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAE 359 Query: 407 QEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFV 464 GI + V G ++ D ++ +V G L DG +G ++ + R+ LS Sbjct: 360 DVGIARENIFIVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQD 419 Query: 465 GHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 G L V V L I PEI+ G Y + + + V V + + Sbjct: 420 GILVVVVTLGKDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEW 478 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 +L+++I L L + +KP++ I ++ Sbjct: 479 SMLKQNIRELLGQFLYEETKRKPMILPIIMEV 510 >gi|239908431|ref|YP_002955173.1| hypothetical protein DMR_37960 [Desulfovibrio magneticus RS-1] gi|239798298|dbj|BAH77287.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 551 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 187/554 (33%), Positives = 291/554 (52%), Gaps = 13/554 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GEIG+N S I++DCG+ FP D L G+D+V P FI++ R Sbjct: 7 VTLYPLGGLGEIGLNCMAL----VSGDSMIVVDCGLMFPDDSLFGIDVVIPRFDFILQNR 62 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I +TH HEDH GAL L P+YAS F + L K + + C+ A Sbjct: 63 DKLKGIVLTHGHEDHIGALPWLMRSCDAPLYASSFTLALAGKKLEEHGLKEFTTCVPVSA 122 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 GD V +G F + V HSI AL I +P G IVHTGD+K+D + + G TD D++ Sbjct: 123 GDTVTLGDFKVTFFPVCHSIVHGFALGIETPAGRIVHTGDFKIDRNPLDGHATDLDAIKR 182 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G + L+ DSTNA REG ++E+ IK + DI G ++VT FSS + R++ I D Sbjct: 183 FSGDGAMLLLSDSTNAEREGFALTEREIKAALGDIFATCSGRIVVTLFSSHIQRMQEIYD 242 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A GRK+ + G SL + +A ++ ++ + E P Q++++ TGSQGE Sbjct: 243 LAHATGRKVAVSGKSLFTNIEIARELKHLRVPPGTEATLEELASLPDAQVVLLVTGSQGE 302 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL++L+ GE R VK+ + DTVI SSR IPGN AI + NRL + G V+ E + Sbjct: 303 PLSALSRLAYGEHRQVKIQKGDTVILSSRFIPGNIRAITRLINRLYKLGAEVLYERVQA- 361 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNGKML 422 +H SGH + ++L+ M + + P+ + IHGE HLV H +A+ G+A + +G+ + Sbjct: 362 IHASGHAHADELRLMLKTVSPKFFIPIHGEYRHLVKHARIAVSCGVAPERALVIEDGQPV 421 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 I + D + DG +G + +R+ L+ G + V +++D + Sbjct: 422 TFAEGLIRLEDAIPVEHIYVDGKGVGDVGVTVLKERQLLAGEGLVIVVLVVDEKSGELTF 481 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G ++ + + V+ ++P + LL+E I SALR +K+ Sbjct: 482 GPNILSKGF-VFEQHYSHVLEDAKCIVLDIYENVPPGQS---DLLKERIRSALRRFFRKI 537 Query: 542 WGKKPLVTVFINKI 555 + P+V + + Sbjct: 538 LERDPVVVPLVITL 551 >gi|218437750|ref|YP_002376079.1| beta-lactamase [Cyanothece sp. PCC 7424] gi|218170478|gb|ACK69211.1| beta-lactamase domain protein [Cyanothece sp. PCC 7424] Length = 602 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 176/563 (31%), Positives = 308/563 (54%), Gaps = 22/563 (3%) Query: 1 MKNE----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M N +L +PLGG+ EIG N +Y Y + +++D G++FP D++ GV++V P Sbjct: 1 MTNNGSLSKLKIIPLGGLHEIGKNTCIYEY----EDEILIVDAGLAFPTDEMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 ++T++ + R + + TH HEDH G + + +P +Y AI LL+ K V Sbjct: 57 ELTYLRENRHKIKGMIATHGHEDHIGGIPYHLKQVDIPVIYGPRLAIALLQDKLEEAAVL 116 Query: 116 KKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + + V VG F +E +R HS+ ++ L I +P+G ++HTGD+K+D + Sbjct: 117 NRTTLKTVGPREMVRVGKNFVVEFIRNTHSMADSFTLAIHTPMGILIHTGDFKVDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D L G +G+L L+ DSTN+ G SE + N+ I A+G +++TTF+ Sbjct: 177 GERFDFHRLAEYGEKGVLCLLSDSTNSEVPGQTPSESSVIPNLDRIFAEAQGRIMLTTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV R+ + +A++ RK+ + G S+ V++ ++G IK D LF+ +S P E+ Sbjct: 237 SSVHRVNITLQLAQKYNRKVAVAGRSMLNVIAHCRNLGYIKCPDDLFVPIKSTKGLPDER 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGEP +A+ ++S+GE +K+ DT+IFS+ IPGN +A+ + +RL+ QG Sbjct: 297 VVILTTGSQGEPLAAMTRISKGEHPLIKVRPGDTIIFSANPIPGNTIAVVNCIDRLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--A 411 VI + +HVSGH D K M +P+ V +HGE LV H + A + G+ Sbjct: 357 ANVIYGR-DKGIHVSGHGCQEDQKMMLALTKPKFFVPVHGEHRMLVKHSQTAQKMGVSPD 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + ++NG ++ L P+ IE++ +V GL L D +G + + +R+QL+ G ++V Sbjct: 416 NIVIIKNGDVIELTPERIEVVAQVPAGLELVDQ--VGIVHEHIMEERQQLADDGVVTVAA 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRR-----KDLKLL 526 +++ + PE+ G+ + +H+L+ ++V + + + D L Sbjct: 474 TVNSEGKLITQPEVNLRGVVTVV-ERSLLHQLINRSVEQLLSERSNEFKTEAGATDWAKL 532 Query: 527 RESISSALRSLLKKVWGKKPLVT 549 R+ I + L+ L+K+ +PLV Sbjct: 533 RQEIENYLQRLIKRELRSQPLVI 555 >gi|89053690|ref|YP_509141.1| beta-lactamase-like [Jannaschia sp. CCS1] gi|88863239|gb|ABD54116.1| beta-lactamase-like protein [Jannaschia sp. CCS1] Length = 558 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 192/557 (34%), Positives = 302/557 (54%), Gaps = 4/557 (0%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDI 58 M + L++LP+GG GEIGMN +YGYG + I++D GV+FP D PGVDL+ PD+ Sbjct: 1 MSDRNRLIYLPIGGAGEIGMNCYVYGYGPEGQERLIVVDTGVAFPDMDGQPGVDLILPDV 60 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ + + AIFITHAHEDH GA+ LW L PVY F K Sbjct: 61 DWLEDRKGRIEAIFITHAHEDHVGAVGHLWGRLEAPVYCRKFTAIHAMRKMDEAGHDAAQ 120 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + D V+ G F + V+HSIPE LVI S G ++H+GD+K+D ++G+ Sbjct: 121 VRVVEAYPDVVEAGPFKVSFAPVSHSIPEASGLVIDSDAGRVIHSGDYKIDRSPVVGEAF 180 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D+D I ++G+LA +CDSTN SE + I +++ AKG V+ TTF+S+++ Sbjct: 181 DEDMWREIASDGVLAYVCDSTNVFSRHPGRSESELPPQITELVAKAKGMVVATTFASNIA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ D GR I L+G +++R+V + G++ +S E PRE L++I Sbjct: 241 RLQTLADAGIAAGRSICLMGRAMQRMVKAGREAGVLTNFPTTVSPEDALDIPRESLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A A LSRG+ +L E DT +FSS+ IPGNEV + +I+N L E GV ++ Sbjct: 301 TGSQGERRAASASLSRGKYLGHELKEGDTFLFSSKTIPGNEVPVAYIQNSLAEIGVEIV- 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +D HVSGH D++ M++ ++PQ++V HGE HL H LA+ +G+A + N Sbjct: 360 DDTSGFYHVSGHANRPDIEVMHEVLKPQIVVPCHGEYRHLREHSRLAMGKGMAGI-VAAN 418 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G M+ L + + + + G DG D I +R +++ G + V +++D Sbjct: 419 GMMVELSGNAPGVTEHIEVGRTYLDGDAFVGQYDGVIRERMKMALNGMVVVALIVDESDE 478 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + + G+P G + +L+ + + L D L E++ R + Sbjct: 479 VLEDAWVQLKGLPEVGSSGVSLQELVEDDIARLLPRLDAKIIDDDDKLEEAVKRVARKVC 538 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VT+ ++++ Sbjct: 539 LQEIGKKPEVTLLVSRL 555 >gi|291569899|dbj|BAI92171.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 615 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 175/568 (30%), Positives = 297/568 (52%), Gaps = 22/568 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ Sbjct: 21 NSPKLKIIPLGGLHEIGKNTCVFEY----EDEIIILDAGLAFPTDGMHGVNIVLPDVTYL 76 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + +P +Y A+ LL K VS + Sbjct: 77 RENRDKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLHGKLEEAGVSDRTEL 136 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V +G F +E +R HSI ++ + I +PVG ++H+GD+K+D + G+ D Sbjct: 137 RTVRPRDIVRIGKNFLVEYIRNTHSIADSFTVAINTPVGVVIHSGDFKVDHTPVDGEFFD 196 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+ L+ DSTNA G SE + N+ I+ A G VLVTTF+SSV R Sbjct: 197 FQRLAEYGEKGVHCLLSDSTNAEVPGFTPSEASVYPNLERIIATASGRVLVTTFASSVHR 256 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+ IA+++GR + ++G S+ V++ + ++G IK D LF+ + P E+++++ Sbjct: 257 VNIILSIAQKLGRSVAVVGRSMLNVIAHSRNLGYIKCPDNLFIPLNAIRSLPDEKVLILT 316 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +A+ +++ G R + + + DT++FS+ IPGN +A+ + ++L+ QG VI Sbjct: 317 TGSQGEPLAAMTRIANGAHRQISIKQGDTIVFSANPIPGNTIAVVNTIDKLMMQGANVIY 376 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +HVSGH D K M RP+ V +HGE LV H + A GI + + Sbjct: 377 GRHHG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVQHSKTAKSMGIPPENMVII 435 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L + I + +V G+ D G D + +R+QL+ G ++V V + + Sbjct: 436 NNGDVVELTENSIRVGGKVPSGIEPVDSSRTGFVRDDVLKERQQLAEDGLITVAVAVSDE 495 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD----------LPQFRRKDLKLL 526 + PE G+ D + ++K + T+ D + + D + Sbjct: 496 GKLLATPETHLKGV-VMTADQAAFKQHIVKVIEATLSDRWSELSRSFGNGEGNQIDWVGV 554 Query: 527 RESISSALRSLLKKVWGKKPLVTVFINK 554 R I A+ LL++ PL V + + Sbjct: 555 RTEIERAIARLLRRELQSNPL-LVVLMQ 581 >gi|153952511|ref|YP_001398989.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939957|gb|ABS44698.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 662 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 168/556 (30%), Positives = 289/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I+ID G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIIDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I AKG V+++TFSS++ R+ Sbjct: 286 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFSRAKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y ++++I T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIITT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINIKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|86152382|ref|ZP_01070592.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86154125|ref|ZP_01072324.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315125094|ref|YP_004067098.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840679|gb|EAQ57931.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85842365|gb|EAQ59581.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315018816|gb|ADT66909.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 662 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 163/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC- 120 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + ++G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRKVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAYYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ + V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRVKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKTT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|221638946|ref|YP_002525208.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides KD131] gi|221159727|gb|ACM00707.1| Beta-lactamase domain protein [Rhodobacter sphaeroides KD131] Length = 557 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 193/557 (34%), Positives = 303/557 (54%), Gaps = 5/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M L++LPLGG GEIGMN +YGYG + I++D GV+FP + PGVDL+ DI+ Sbjct: 1 MSANRLIYLPLGGAGEIGMNCYVYGYGPEGRERLIVVDLGVTFPDMETTPGVDLIMADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + + AIFITHAHEDH GAL LW L PVYA F + K + Sbjct: 61 WLEERQDRIEAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPADQI 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + V+ G F ++ V V+HSIPE+ ALVI +P G IVH+GD+KLD ++G+ Sbjct: 121 TIVGARPEMVEAGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPWA 180 Query: 180 KDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 ++ AI E + ALMCDSTN SE + + ++ A+G V+ TTF+S+V+ Sbjct: 181 DETFRAIAAERPVKALMCDSTNVFSLHPGRSEATLGDPLKALIAGARGMVVATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + A R I LLG +++R+V+ A + G++ +S E PR+ L++I Sbjct: 241 RLKTLAEAAAAADRSICLLGRAMRRMVTAAQESGVLTSFPAVVSPEEAAEIPRQNLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQL+RG+ +++ E D +FSS+ IPGNE + I N E GV V+ Sbjct: 301 TGSQGERRAASAQLARGKYLGLEMKEGDLFLFSSKTIPGNERGVLRIVNSFSEMGVDVVD 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + HVSGH DL++++ + P++LV +HGE HL H +A +GI Sbjct: 361 DAG-GLYHVSGHANRPDLEQVHTLLWPEMLVPMHGEHRHLREHARIAAAKGITADVI--T 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 M+ +++ + + G DG ++ D + R +++ GH+ V+LD Sbjct: 418 NGMMVDLTRGLQVAEYIDTGRTYLDGSVLIGARDGVVRDRIRMALNGHVLTTVILDEQDA 477 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G + +G+P G + + L + + + +D L E+I +R + Sbjct: 478 PLGDAWVELMGLPERGRTGRALSETLEEELSDYLGRAGAKVLRDDDKLDEAIRRMVRQVA 537 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV ++++ Sbjct: 538 MEEIGKKPEVTVVVSRL 554 >gi|314933454|ref|ZP_07840819.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] gi|313653604|gb|EFS17361.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] Length = 557 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF++H HE GA+ + + PVY S I L++ + KK+ Sbjct: 63 IENKDKLKGIFLSHGHEHAIGAVSYILEQIDAPVYGSKLTIALIKENMKARNIKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 TVSHDSVMKFKNVNVSFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLHGQYAPDMK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGDEGVFALISDSTEAEKPGYNTPENVIEHHMYDAFTKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVDNYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I N LV G +I Sbjct: 303 MQGEPVEALSQMAQNKHKIMNIEEGDSVFLAITASANMEVIIADTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMLNIMKPEYFIPVQGEFKMQIAHAKLAAESGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVINYNGKDMVLNEKVNSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ + V T V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELLNEAEEKVRTIVEAGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|184155092|ref|YP_001843432.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum IFO 3956] gi|183226436|dbj|BAG26952.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum IFO 3956] Length = 599 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 150/559 (26%), Positives = 259/559 (46%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++DCG+ +P+++L G+D+V PD +++ Sbjct: 3 KIKIIPFGGVRENGKNMYAVE----VDGQIFILDCGLKYPENELMGIDVVIPDWSYLQDH 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL + VPVY S I L + + KK Sbjct: 59 ADQIKGVFLTHGHADAIGALPYFLADFKVPVYGSQLTIALAKLAVKENKQVKKFNDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G +I H IP+T+ + +++P G+IV+TGD+K D A+ G T+ L Sbjct: 119 NETKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYTGDFKFDQTAVKGYQTNLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DS A G E+ I+ I D +N KG ++V + +S++ RI+ I Sbjct: 179 AEVGTEGVLALLSDSAGAGITGASTRERDIRAYIKDTFENTKGRIVVASVASNIMRIQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A RKIVL G L++++ A + +++ D +S E +Q++++ TG Sbjct: 239 VDAALATDRKIVLSGEDLEQIIETAEGLNLLQIPDDTLISFEEALDLDDDQVVILVTGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +++L D V ++ E + K+ L G V + Sbjct: 299 GEPTKSLQQIANGDDPDIQLTSTDLVFVTTTPSYAIETMVQKTKDMLYRAGAEVKFIADD 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ SG ND + M +++P+ + I GE L H ELA + GI + G Sbjct: 359 --LNPSGQASQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPAENIFITAKGD 416 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + D V G + DG +G ++ + RR LS G V +D I Sbjct: 417 VLSYEDGKFHLGDRVEVGNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ V V + + D L++++ L L Sbjct: 477 VARPQITSRGF-VFVKTNRELMNQAADLVEKVVQEDLDQKEFDWGHLKQNVRDKLNRFLF 535 Query: 540 KVWGKKPLVTVFINKISRQ 558 + P++ I +I++ Sbjct: 536 NQTKRHPVILPVIMEINQH 554 >gi|305681497|ref|ZP_07404304.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305659702|gb|EFM49202.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length = 685 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 278/556 (50%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM ++ Y + + +++DCGV FP PGVDL+ PD I Sbjct: 118 KNGLRIYALGGISEIGRNMTVFEY----NNRLLIVDCGVLFPSSGEPGVDLILPDFGPIE 173 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + N+ A+ ITH HEDH GA+ L +P+ AS F + L+ AK K+ + Sbjct: 174 DKIGNVDALVITHGHEDHIGAIPWLLKLRPDLPIIASKFTLALIAAKCREHHQRPKLIEV 233 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G F++ VNHSIP+ + + I++ G +V TGD KLD G TD Sbjct: 234 GNTSVENR--GPFNLRFWAVNHSIPDCLGIAIKTKAGLVVMTGDIKLDQTPPDGRPTDLP 291 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L +G+EGI +CDSTNA G SE I + I+ +AK V++ F+S+V R++ Sbjct: 292 ALSRLGDEGIDLFLCDSTNATTPGISGSESAIAPTLKRIVADAKQRVILACFASNVYRVQ 351 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A +G ++ +S + ++++I TG Sbjct: 352 AAVDAAVAAGRKVAFNGRSMIRNMEIAEKLGYLRVPRGTIVSMDDATKMAPHKVMLITTG 411 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D ++ SS +PGNE A+ + N L + G VI Sbjct: 412 TQGEPMAALSRMARREHRQITVRDGDVIVLSSSLVPGNEEAVFGVINMLAQIGATVITNK 471 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +N Sbjct: 472 -DANVHTSGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAIATGVDRNQVVLAQN 530 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + I + ++ G DG +G + R + G +S+ ++DN Sbjct: 531 GVVVDMVNGKISVAGQIPVGNLYVDGVTMGDIDQEVLDDRTSMGEGGLISITAVIDNRTG 590 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + V T+ DL D + + + + Sbjct: 591 RLLEHPTVHAKGFS---DDAKTMMPEVQNLVENTMNDLAAEGENDPYRMVQHLRRKVSRY 647 Query: 538 LKKVWGKKPLVTVFIN 553 +++ W + P++ + Sbjct: 648 VEQTWRRNPMIMPTVV 663 >gi|152989814|ref|YP_001355536.1| hypothetical protein NIS_0062 [Nitratiruptor sp. SB155-2] gi|151421675|dbj|BAF69179.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 607 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 161/556 (28%), Positives = 290/556 (52%), Gaps = 12/556 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ++ PLGG+GEIG N+ ++ + + I+ID G+SFP +D+ GVD++ PD +++ Sbjct: 56 SNAKVKITPLGGLGEIGGNITVFE----TEKSAIVIDVGMSFPTEDMHGVDILVPDFSYL 111 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA+ L+ + P+Y +P +G++ K +SK K Sbjct: 112 RQIKNKIKGIVITHAHEDHIGAVPYLFKEMQFPIYGTPLPLGMIGNKFDEHGMSKYKSYF 171 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + +G F +E + + HSI + +L I + G I+HTGD+K+D I G D Sbjct: 172 RYIEKRKPIKIGDFEVEWMHMTHSIIDASSLAITTEAGTIIHTGDFKIDHTPIDGYPADL 231 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G G+L L+ DSTN+ G SE + + AKG VL++TFSS++ R+ Sbjct: 232 HRLAYYGERGVLLLLSDSTNSHNPGITKSEASVGPTFDLLFSRAKGRVLMSTFSSNIHRV 291 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ + GRK+ ++G S++R + + +++G +K +F+ G Y ++++++ T Sbjct: 292 YQAIEHGIKYGRKVCIIGRSMERNLEITMELGYVKLPQNIFIEPHELGKYRDDEILIVTT 351 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R+VK+ DT+I S++AIPGNE ++ + N + + G V + Sbjct: 352 GSQGESMSALYRMATNEHRHVKIKPSDTIILSAKAIPGNERSVSSLINFIQKCGATVAYQ 411 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 D +HVSGH + K M + ++P+ + +HGE HL+ HKE A++ GI + + Sbjct: 412 DF-SEIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHLMKHKETAVKCGIPERNIYLMS 470 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 +G + + P ++ + V G D L + + R++++ G + + + Sbjct: 471 DGDQIEVSPKYMKKVGTVKTGKAYIDNQLNEEIESDVVIDRQKMATEGIVIIVAQIAKDT 530 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 P++ G+ A D K + + +++ P+ K L +R Sbjct: 531 KKFITPPKVSSFGLVADKKDKE-FEKEISTLLEQFLMNKPELVEA-PKKLENDFRQVVRK 588 Query: 537 LLKKVWGKKPLVTVFI 552 + + + K P + + Sbjct: 589 HIFRKYKKYPTIVPTL 604 >gi|159030456|emb|CAO91358.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 582 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 300/563 (53%), Gaps = 22/563 (3%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M ++ L +PLGG+ EIG N ++ Y + I++D G++FP DD+ GV++V P Sbjct: 1 MSQDKTQAKLKIIPLGGLHEIGKNTCVFEY----DDEIILLDAGLAFPSDDMHGVNVVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVS 115 D+T++ + R + + +TH HEDH G + VP+ Y A+ LL K ++ Sbjct: 57 DMTYLRENRHKIKGMIVTHGHEDHIGGIPYHLKQFDVPIIYGPRLAMALLRDKLEEAGLA 116 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D + Sbjct: 117 NRTKLETVAPRQMVRLGKSFMVEYIRNTHSIADSFCVAIHTPLGVVIHTGDFKIDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D + G +G+L L+ DSTNA G SE + + + A G +++TTF+ Sbjct: 177 GEFFDLQKIAEHGEKGVLCLLSDSTNAEVPGYTPSEASVYPGLERVFNQATGRIMITTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV RI ++ +A++ RK+V++G S+ V++ A ++G IK D LF ++ E+ Sbjct: 237 SSVHRINLVLKLAQKFNRKVVVVGRSMLNVIAHARNLGYIKCPDDLFEPLKATRNLADEK 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGE +A+ ++S+GE ++++ + DT++FS+ IPGN +A+ + +RL+ QG Sbjct: 297 IVILTTGSQGETLAAMTRISKGEHPHIRVRQGDTIVFSANPIPGNTIAVVNTIDRLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 V+ + +HVSGH D K M RP+ V +HGE LV H ++A GI Sbjct: 357 ANVVYGR-DKGIHVSGHGSQEDHKLMLSLTRPKFFVPVHGEHRMLVKHAQMAQSMGIPAE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + V+NG + L D I I V G+ L D + + + +R+QL+ G +++ Sbjct: 416 NMVIVKNGDTIELTGDRIAIGAPVPSGIELVDQAGV--VHEHIMQERQQLAEDGVITIAA 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-----DLKLL 526 ++ + PEI G+ + +++L+++ + + D + D L Sbjct: 474 FVNAEGQLSAPPEINLRGVVTKV-EIPLLNQLIIRAIERCLSDRSSEFKTAMGDPDWAGL 532 Query: 527 RESISSALRSLLKKVWGKKPLVT 549 R I + L+ L+K+ +PLV Sbjct: 533 RAEIETTLQRLIKRELKSQPLVI 555 >gi|299783047|gb|ADJ41045.1| Metallo-beta-lactamase superfamily protein [Lactobacillus fermentum CECT 5716] Length = 599 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 149/559 (26%), Positives = 259/559 (46%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++DCG+ +P+++L G+D+V PD +++ Sbjct: 3 KIKIIPFGGVRENGKNMYAVE----VDGQIFILDCGLKYPENELMGIDVVIPDWSYLQDH 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL + VPVY S I L + + KK Sbjct: 59 ADQIKGVFLTHGHADAIGALPYFLADFKVPVYGSQLTIALAKLAVKENKQVKKFNDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G +I H IP+T+ + +++P G+IV+TGD+K D A+ G T+ L Sbjct: 119 DETKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYTGDFKFDQTAVKGYQTNLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DS A G E+ I+ I D +N KG ++V + +S++ RI+ I Sbjct: 179 AEVGTEGVLALLSDSAGAGITGASTRERDIRAYIKDTFENTKGRIVVASVASNIMRIQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A RKIVL G L++++ A + +++ D +S E +Q++++ TG Sbjct: 239 VDAALATDRKIVLSGEDLEQIIETAEGLNLLQIPDDTLISFEEALDLDDDQVVILVTGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +++L D V ++ E + K+ L G V + Sbjct: 299 GEPTKSLQQIANGDDPDIQLTSTDLVFVTTTPSYAIETMVQKTKDMLYRAGAEVKFIADD 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ SG ND + M +++P+ + I GE L H ELA + GI + G Sbjct: 359 --LNPSGQASQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPAENIFITAKGD 416 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + D V G + DG +G ++ + RR LS G V +D I Sbjct: 417 VLSYEDGKFHLGDRVEVGNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ + V + + D L++++ L L Sbjct: 477 VARPQITSRGF-VFVKTNRELMNQAADLIEKVVQEDLDQKEFDWGHLKQNVRDKLNRFLF 535 Query: 540 KVWGKKPLVTVFINKISRQ 558 + P++ I +I++ Sbjct: 536 NQTKRHPVILPVIMEINQH 554 >gi|223044241|ref|ZP_03614278.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] gi|222442391|gb|EEE48499.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] Length = 568 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 18 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 73 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF++H HE GA+ + + PVY S I L++ + KK+ Sbjct: 74 IENKDKLKGIFLSHGHEHAIGAVSYILEQIDAPVYGSKLTIALIKENMKARNIKKKVRYY 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 134 TVSHDSVMKFKNVNVSFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLHGQYAPDMK 193 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 194 RMAEIGDEGVFALISDSTEAEKPGYNTPENVIEHHMYDAFTKVKGRLIVSCYASNFIRIQ 253 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 254 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVDNYPKNEVIIIATG 313 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I N LV G +I Sbjct: 314 MQGEPVEALSQMAQKKHKIMNIEEGDSVFLAITASANMEVIIADTLNELVRAGAHII--P 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 372 NNKKIHASSHGCMEELKMMLNIMKPEYFIPVQGEFKMQIAHAKLAAESGVAPEKIFLVEK 431 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 432 GDVINYNGKDMVLNEKVNSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 491 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ + V T V Q +R + +++++ + L Sbjct: 492 RIAAGPEIQSRGF-VYVRESEELLNEAEEKVRTIVEAGLQEKRIEWSEIKQNMRDQISKL 550 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 551 LFESTKRRPMIIPVISEI 568 >gi|121613382|ref|YP_001001354.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167006243|ref|ZP_02272001.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87248964|gb|EAQ71926.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 662 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|227514783|ref|ZP_03944832.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus fermentum ATCC 14931] gi|227086892|gb|EEI22204.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus fermentum ATCC 14931] Length = 614 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 150/559 (26%), Positives = 259/559 (46%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++DCG+ +P+++L G+D+V PD +++ Sbjct: 18 KIKIIPFGGVRENGKNMYAVE----VDGQIFILDCGLKYPENELMGIDVVIPDWSYLQDH 73 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL + VPVY S I L + + KK Sbjct: 74 ADQIKGVFLTHGHADAIGALPYFLADFKVPVYGSQLTIALAKLAVKENKQVKKFNDFHVV 133 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G +I H IP+T+ + +++P G+IV+TGD+K D A+ G T+ L Sbjct: 134 DETKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYTGDFKFDQTAVKGYQTNLARL 193 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DS A G E+ I+ I D +N KG ++V + +S++ RI+ I Sbjct: 194 AEVGTEGVLALLSDSAGAGITGASTRERDIRAYIKDTFENTKGRIVVASVASNIMRIQQI 253 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A RKIVL G L++++ A + +++ D +S E +Q++++ TG Sbjct: 254 VDAALATDRKIVLSGEDLEQIIETAEGLNLLQIPDDTLISFEEALDLDDDQVVILVTGRM 313 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +++L D V ++ E + K+ L G V + Sbjct: 314 GEPTKSLQQIANGDDPDIQLTSTDLVFVTTTPSYAIETMVQKTKDMLYRAGAEVKFIADD 373 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ SG ND + M +++P+ + I GE L H ELA + GI + G Sbjct: 374 --LNPSGQASQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPAENIFITAKGD 431 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + D V G + DG +G ++ + RR LS G V +D I Sbjct: 432 VLSYEDGKFHLGDRVEVGNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 491 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ V V + + D L++++ L L Sbjct: 492 VARPQITSRGF-VFVKTNRELMNQAADLVEKVVQEDLDQKEFDWGHLKQNVRDKLNRFLF 550 Query: 540 KVWGKKPLVTVFINKISRQ 558 + P++ I +I++ Sbjct: 551 NQTKRHPVILPVIMEINQH 569 >gi|221230273|ref|YP_002503689.1| hypothetical protein MLBr_01512 [Mycobacterium leprae Br4923] gi|219933380|emb|CAR71607.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 558 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV P D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTIFEHL----GRLLIIDCGVLSPGHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH GA+ L +PV S F + L+ AK R+ + Sbjct: 72 DDIEALVLTHAHEDHIGAIPFLLKLRSDIPVVGSKFTLALVAAKCREHRIKPVFVEVVGG 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + G F E VNHSIP+ + + + + G ++HTGD KLD + G TD + Sbjct: 132 QSSRH--GVFECEYFAVNHSIPDALTIAVYTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A G V+V F+S+V R++ +I Sbjct: 190 RLGDAGVDLFLCDSTNAEIPGVGPSESEVGPTLHRLIQGADGRVIVACFASNVDRVQQVI 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R +S+A D+G ++ D + + + EQ+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMSIARDLGFLRVDDSHMIDIAAAEMMAPEQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE +++ L D V+ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHQSITLTSGDLVVLSSSLIPGNEEAVYGVIDALAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRQVMPVHGTWRMLRANAKLAASTGVPEDSILIAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIF 480 + L + V G DG + G D+ + +R LS G ++V V++ + Sbjct: 429 VDLVAGKASVSGAVPVGKMFVDGLITGDVGDVILGERLILS-SGFVAVTVVVKRSTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 VP++ G + K + ++ V + L D + +++ A+ + + Sbjct: 488 TVPQLYSRGFS----EDPKALEPAVRKVEAELESLLAENVTDPSKIAQAVRRAIGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|253574696|ref|ZP_04852036.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845742|gb|EES73750.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 569 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 288/555 (51%), Gaps = 12/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG+GEIG NM YG + I+ID G+ FP L G+D + PDI+++++ + Sbjct: 22 VRIFSLGGIGEIGKNM----YGIEFRDEIILIDAGLKFPDSRLTGIDCIIPDISYLIENK 77 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH GA+ + L +P+Y P IGL++AK R+ + F Sbjct: 78 HKMKGLFLTHGHEDHIGAIPYVLRQLQLPIYGGPLTIGLVKAKLEEHRLLGQAELHVFHE 137 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D+ ++ R HSIP+ +V+ +P G+IVHTGD+K D D + + Sbjct: 138 NDRYAFKHLAVHFFRTTHSIPDAFGIVVDTPYGSIVHTGDFKFDFTPED-RPADLFKMAS 196 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G EG+LAL+ DSTN+ +EG SE+ + I + + +G +L TF+S+V R++ +++ Sbjct: 197 VGGEGVLALLADSTNSEKEGFTPSERRVGDAILESFRGCRGRILFATFASNVHRLQQVVE 256 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKI ++G S+++V ++ D+G I+ + + + + YP EQ++++ TGSQGE Sbjct: 257 AAAIVNRKIAVIGRSMEKVFAIGQDLGYIRVPEGMLIDVKHIDRYPEEQVLIVCTGSQGE 316 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ G RNV++ DTVI+SS IPGN I + L+ G VI Sbjct: 317 PNAALSRIASGAHRNVQVYPGDTVIYSSSPIPGNAQNINRSIDLLLRAGANVIYGSI-FD 375 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH DLK M +IRP+ + IHGE L++H++LALQ GI + + G L Sbjct: 376 IHTSGHGCREDLKLMLSFIRPKYFIPIHGEYRMLLSHRDLALQTGIPEDRIFIMNIGDTL 435 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADL-GIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 ++ + + + G L + + + +R +L+ G + V + +D I Sbjct: 436 SVYRNRAKRGRTIPSGQVLISNGEMRPTHEDTLLLERMELAQEGIVIVVMTVDRKTRQIL 495 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G Y D + + + + L + D + LR K Sbjct: 496 AGPDIVSRGF-VYMQDARPLLRRAEAMLKRNLNRLGEKEPYDHNAWLRATQQQLRRYFAK 554 Query: 541 VWGKKPLVTVFINKI 555 G+ P + I ++ Sbjct: 555 EVGRTPHIMPSILEV 569 >gi|77463090|ref|YP_352594.1| metallo-beta-lactamase superfamily hydrolase [Rhodobacter sphaeroides 2.4.1] gi|126461962|ref|YP_001043076.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|332557963|ref|ZP_08412285.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides WS8N] gi|77387508|gb|ABA78693.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Rhodobacter sphaeroides 2.4.1] gi|126103626|gb|ABN76304.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17029] gi|332275675|gb|EGJ20990.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 557 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 193/557 (34%), Positives = 303/557 (54%), Gaps = 5/557 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M L++LPLGG GEIGMN +YGYG + I++D GV+FP + PGVDL+ DI+ Sbjct: 1 MSANRLIYLPLGGAGEIGMNCYVYGYGPEGRERLIVVDLGVTFPDMETTPGVDLIMADIS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + + + AIFITHAHEDH GAL LW L PVYA F + K + Sbjct: 61 WLEERQDRIEAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPADQI 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + V+ G F ++ V V+HSIPE+ ALVI +P G IVH+GD+KLD ++G+ Sbjct: 121 TIVGARPEVVEAGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPWA 180 Query: 180 KDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 ++ AI E + ALMCDSTN SE + + ++ A+G V+ TTF+S+V+ Sbjct: 181 DETFRAIAAERPVKALMCDSTNVFSLHPGRSEATLGDPLKALIAGARGMVVATTFASNVA 240 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ + A R I LLG +++R+V+ A + G++ +S E PR+ L++I Sbjct: 241 RLKTLAEAAAAADRSICLLGRAMRRMVTAAQESGVLTSFPAVVSPEEAAEIPRQNLMLIV 300 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE R+A AQL+RG+ +++ E D +FSS+ IPGNE + I N E GV V+ Sbjct: 301 TGSQGERRAASAQLARGKYLGLEMKEGDLFLFSSKTIPGNERGVLRIVNSFSEMGVDVVD 360 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + HVSGH DL++++ + P++LV +HGE HL H +A +GI Sbjct: 361 DAG-GLYHVSGHANRPDLEQVHTLLWPEMLVPMHGEHRHLREHARIAAAKGITADVI--T 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 M+ +++ + + G DG ++ D + R +++ GH+ V+LD Sbjct: 418 NGMMVDLTRGLQVAEYIDTGRSYLDGSVLIGARDGVVRDRIRMALNGHVLTTVILDEQDA 477 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G + +G+P G + + L + + + +D L E+I +R + Sbjct: 478 PLGDAWVELMGLPERGRTGRALSETLEEELSDYLGRAGAKVLRDDDKLDEAIRRMVRQVA 537 Query: 539 KKVWGKKPLVTVFINKI 555 + GKKP VTV ++++ Sbjct: 538 MEEIGKKPEVTVVVSRL 554 >gi|57505362|ref|ZP_00371291.1| conserved hypothetical protein subfamily [Campylobacter upsaliensis RM3195] gi|57016498|gb|EAL53283.1| conserved hypothetical protein subfamily [Campylobacter upsaliensis RM3195] Length = 655 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 160/556 (28%), Positives = 286/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ ++ I+ID G+SFP + GVD++ PD ++ Sbjct: 103 SEHKIRITPLGGLGEIGGNISVFE----TNNDAIIIDLGMSFPDGTMHGVDIIIPDFDYV 158 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 159 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 218 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ +G F +E + + HSI + AL +++ G I+HTGD+K+D I G TD Sbjct: 219 RPVEKRRIYEIGEFEVEWIHITHSIIDASALAVKTRAGTIIHTGDFKIDQTPIDGYPTDL 278 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG++ L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 279 HRLAHYGEEGVMCLLSDSTNSYKEGYTKSESSVGPTFDQIFAKTKGRVIMSTFSSNIHRV 338 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 339 YQAITYGLRYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 398 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 399 GSQGETMSALYRMATDEHKFIKIKPSDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 458 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M ++P+ + +HGE H+ HKE A++ GI + + Sbjct: 459 EF-SEIHVSGHASMEEQKLMLSLVKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 517 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + I+ + V G D + + AD + R++L+ G + + +D Sbjct: 518 DGDQVEVCQKYIKRVKTVKTGKIFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 577 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + D + L I + LR Sbjct: 578 KTLINKPRVFSYGLVADKHDHA-FSKEMADVLSVFFTNAKDEWFNDTRFLENQIRTVLRK 636 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + + Sbjct: 637 HIFRKIKKYPTIVPTL 652 >gi|86150517|ref|ZP_01068741.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597647|ref|ZP_01100880.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|85838969|gb|EAQ56234.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88189951|gb|EAQ93927.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|284926901|gb|ADC29253.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 662 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|319892294|ref|YP_004149169.1| Zn-dependent hydrolase, RNA-metabolising [Staphylococcus pseudintermedius HKU10-03] gi|317161990|gb|ADV05533.1| Zn-dependent hydrolase, RNA-metabolising [Staphylococcus pseudintermedius HKU10-03] gi|323464609|gb|ADX76762.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 557 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 158/558 (28%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLKFPEDEMLGIDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + + PVY S IGL++ +++KKI Sbjct: 63 LENKHKLKGIFLTHGHEHAIGAVSYILEQVEAPVYGSKLTIGLVKENLKARQINKKIRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 123 VVNNESVMRFKGVNITFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDMK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G EG+ AL+ DST A + G E I+ +++D G ++V+ ++S+ RI+ Sbjct: 183 KMAELGEEGVFALLSDSTEAEKPGYNTPENVIESHMFDAFAKVTGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ S+A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIANRLNRKVSFLGRSLESSFSIARKMGYFNIPKDLLIPMSEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q++R + + + + + D+V + A EV IG+ N LV G +I Sbjct: 303 MQGEPVEALSQMARQKHKIMNIQKGDSVFLAITASANMEVIIGNTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H S H +LK M ++P+ + I GE +AH +LA + G+ + Sbjct: 361 NNKKIHASSHGCMEELKLMLNMMKPEYFIPIQGEFKMQIAHAKLASEAGVNPEKIFLAEA 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVIHYDGEDMSLNEKVNAGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + K + V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEALLKEAEEKVREIVEAGLQEKRIEWSEMKQNMRDQVSKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTRRRPMIIPVISEI 557 >gi|205355724|ref|ZP_03222494.1| hypothetical protein Cj8421_1773 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346501|gb|EDZ33134.1| hypothetical protein Cj8421_1773 [Campylobacter jejuni subsp. jejuni CG8421] Length = 664 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 112 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 167 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 168 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 227 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 228 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 287 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 288 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 347 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 348 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 407 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 408 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 467 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 468 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 526 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 527 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 586 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 587 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 645 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 646 HIFRKIKKYPTIVPTI 661 >gi|157415932|ref|YP_001483188.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386896|gb|ABV53211.1| hypothetical protein C8J_1614 [Campylobacter jejuni subsp. jejuni 81116] gi|307748570|gb|ADN91840.1| Ribonuclease J [Campylobacter jejuni subsp. jejuni M1] gi|315931322|gb|EFV10291.1| Metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 327] Length = 662 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFSRTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKTT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|81428675|ref|YP_395675.1| metallo-beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78610317|emb|CAI55366.1| Putative hydrolase, metallo-beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 572 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 142/564 (25%), Positives = 267/564 (47%), Gaps = 15/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + +PLGGV E G N+ + + + ++DCG+ +P+ +L G+D+V PD+T+ Sbjct: 1 MSN--IKIMPLGGVRENGKNLNVVE----VNDEIYILDCGLKYPETELLGIDIVIPDMTY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIP 119 + + + + IF+TH H D GAL VPV+ S I L + ++ Sbjct: 55 LEENAERVAGIFLTHGHADAIGALPYFLKGHDVPVFGSELTIALAKITVSSEPKLRHFNN 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A +D ++ + H+IP ++ +V+++ G IV+TGD+K D A+ TD Sbjct: 115 FHVINANTAIDFEQATVSFFKTTHTIPGSLGIVVKTDEGQIVYTGDFKFDQSALPMYQTD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA +E+ I ++I + K G ++V + +S++ R Sbjct: 175 YARLTEIGQQGVLALLSDSANAESPFETANERDIAESILETFKYQNGRIIVASVASNILR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVI 297 I+ +ID A + RK+VL G L+++V A+ + + + + + + ++ E+ +++ Sbjct: 235 IQQVIDAAYKTNRKVVLTGRDLEKIVRTAMRLEMLTLPDEDILVQPKALSTLAPEETVIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP AL +++ R + + + D V ++ E + K+ + G V Sbjct: 295 ETGRMGEPIKALQKMATSHHRLIHIEQGDLVYLTTSPSHAMETILAKTKDMIYRAGGEVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPP 415 A + +H SGH NDL+ M + PQ L+ + GE + AH ++A + + Sbjct: 355 AVGDD--LHASGHANKNDLQLMLNLLHPQFLMPVQGEYRQMAAHADIAHETGMDYKNIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 V G ++ D + + +V + DG IG ++ + R+ LS G V +D Sbjct: 413 VGKGDIVAYDNDKMHVGGQVDATDVMIDGSGIGDIGNIVLRDRKLLSEDGIFIAVVTIDR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + I P++ G Y + + + V + + D L++ + L Sbjct: 473 KNKKIIAEPKVTARGF-VYVKTSKDLMAESSEIIKQAVQNNLDNKEFDWSHLKQDVRENL 531 Query: 535 RSLLKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I +I++ Sbjct: 532 SHYLYEQTKRRPVILPVIMEINQN 555 >gi|258423884|ref|ZP_05686769.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] gi|257845913|gb|EEV69942.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] Length = 574 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLASEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|87162301|ref|YP_493865.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148267765|ref|YP_001246708.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150393824|ref|YP_001316499.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|253731894|ref|ZP_04866059.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733487|ref|ZP_04867652.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|258416072|ref|ZP_05682340.1| beta-lactamase [Staphylococcus aureus A9763] gi|258421655|ref|ZP_05684579.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9719] gi|258434811|ref|ZP_05688885.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9299] gi|258444613|ref|ZP_05692942.1| beta-lactamase domain-containing protein [Staphylococcus aureus A8115] gi|258449396|ref|ZP_05697499.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6224] gi|258452574|ref|ZP_05700580.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5948] gi|282892763|ref|ZP_06300998.1| beta-lactamase domain-containing protein [Staphylococcus aureus A8117] gi|282916535|ref|ZP_06324293.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus D139] gi|282920519|ref|ZP_06328240.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9765] gi|282927617|ref|ZP_06335233.1| beta-lactamase domain-containing protein [Staphylococcus aureus A10102] gi|283770339|ref|ZP_06343231.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus H19] gi|297208079|ref|ZP_06924510.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912160|ref|ZP_07129603.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus TCH70] gi|304381161|ref|ZP_07363814.1| ribonuclease [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|87128275|gb|ABD22789.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147740834|gb|ABQ49132.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149946276|gb|ABR52212.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|253724304|gb|EES93033.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728541|gb|EES97270.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|257839220|gb|EEV63696.1| beta-lactamase [Staphylococcus aureus A9763] gi|257842341|gb|EEV66766.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9719] gi|257849172|gb|EEV73154.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9299] gi|257850106|gb|EEV74059.1| beta-lactamase domain-containing protein [Staphylococcus aureus A8115] gi|257857384|gb|EEV80282.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6224] gi|257859792|gb|EEV82634.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5948] gi|282319022|gb|EFB49374.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus D139] gi|282590620|gb|EFB95697.1| beta-lactamase domain-containing protein [Staphylococcus aureus A10102] gi|282594181|gb|EFB99168.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9765] gi|282764760|gb|EFC04885.1| beta-lactamase domain-containing protein [Staphylococcus aureus A8117] gi|283460486|gb|EFC07576.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus H19] gi|296887322|gb|EFH26224.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886406|gb|EFK81608.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus TCH70] gi|304340144|gb|EFM06085.1| ribonuclease [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140908|gb|EFW32755.1| hypothetical protein HMPREF9528_00525 [Staphylococcus aureus subsp. aureus MRSA131] gi|320144376|gb|EFW36142.1| hypothetical protein HMPREF9529_00259 [Staphylococcus aureus subsp. aureus MRSA177] Length = 574 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|319404244|emb|CBI77837.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 558 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 259/553 (46%), Positives = 390/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ELVFLPLGGVGEIGMN+A YG+G R+W+++D GVSF +LPGVDL+ PDI F+ Sbjct: 5 NKNELVFLPLGGVGEIGMNLAAYGFGPKDCREWLLVDMGVSFAGPELPGVDLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L +P+Y + F GLLE+KR + +IP Sbjct: 65 ENEKHNVCGLILTHAHEDHYGAVLDLWPKLKIPIYCTCFTAGLLESKRQSDFEFHEIPVN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQ+GD VG FSIE++ VNHSIPE ++L I + +GN++HTGDWK+D LG +TD++ Sbjct: 125 IFQSGDCFQVGPFSIEAISVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPITDEE 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +GN+G+LAL+CDSTNA+++G SE+ ++++I +I+ AKG + +TTF+S++ RIR Sbjct: 185 RFRTLGNKGVLALLCDSTNALQDGISPSEQQVQESISEIILKAKGRIAITTFASNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE +GR+++L+G SLKR V VA ++G + F+++E + P + ++++ TGS Sbjct: 245 SIALAAESVGRQVLLVGRSLKRSVMVAQELGYMDDIAPFITEEDYSHIPPQNIVLVVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EM+N+ L+ DT+I+SSR IPGNE AI I+NR ++QG+ +I Sbjct: 305 QGEPRAALAKLSRNEMKNITLSPGDTIIYSSRNIPGNEKAIIDIQNRFIDQGINIITNR- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L +MY W +PQ+L+ +HGE +HL A K LA Q GI V +RNG + Sbjct: 364 DALVHVSGHPRRSELLQMYDWTKPQILIPVHGEAIHLTAQKTLAQQVGIKTVAGIRNGDI 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 RL P+P+EIID+V G KDGFL+G +LGI +R +LS+VGH+SV++ +++ +++ Sbjct: 424 FRLAPEPVEIIDQVAVGRIYKDGFLLGNEDELGIRERCKLSYVGHVSVSLHMNSKHDLID 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++ G+P D G + +LL + + ++P+ +RKD +L+RE+ A+R+ + K+ Sbjct: 484 NIGLIMFGLPKSDRAGELLEDILLNVIENAINNIPRAKRKDNELIREAARRAVRAAVNKI 543 Query: 542 WGKKPLVTVFINK 554 WGKKP+ VF+++ Sbjct: 544 WGKKPICVVFLHR 556 >gi|218563296|ref|YP_002345076.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112361003|emb|CAL35804.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315926637|gb|EFV06017.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929677|gb|EFV08854.1| Conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 664 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 112 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 167 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 168 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 227 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 228 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 287 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 288 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 347 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 348 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 407 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 408 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 467 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 468 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 526 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 527 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 586 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 587 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 645 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 646 HIFRKIKKYPTIVPTI 661 >gi|260663635|ref|ZP_05864524.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum 28-3-CHN] gi|260551861|gb|EEX24976.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum 28-3-CHN] Length = 599 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 150/559 (26%), Positives = 258/559 (46%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM ++DCG+ +P+++L G+D+V PD +++ Sbjct: 3 KIKIIPFGGVRENGKNMYAVE----VDGHIFILDCGLKYPENELMGIDVVIPDWSYLQDH 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL + VPVY S I L + + KK Sbjct: 59 ADQIKGVFLTHGHADAIGALPYFLADFKVPVYGSQLTIALAKLAVKENKQVKKFNDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G +I H IP+T+ + +++P G+IV+TGD+K D A+ G T+ L Sbjct: 119 DETKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYTGDFKFDQTAVKGYQTNLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DS A G E+ I+ I D +N KG ++V + +S++ RI+ I Sbjct: 179 AEVGTEGVLALLSDSAGAGITGASTRERDIRAYIKDTFENTKGRIVVASVASNIMRIQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +D A RKIVL G L++++ A + +++ D +S E +Q++++ TG Sbjct: 239 VDAALATDRKIVLSGEDLEQIIETAEGLNLLQIPDDTLISFEEALDLDDDQVVILVTGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +++L D V ++ E + K+ L G V + Sbjct: 299 GEPTKSLQQIANGDDPDIQLTSTDLVFVTTTPSYAIETMVQKTKDMLYRAGAEVKFIADD 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ SG ND + M +++P+ + I GE L H ELA + GI + G Sbjct: 359 --LNPSGQASQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPAENIFITAKGD 416 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + D V G + DG +G ++ + RR LS G V +D I Sbjct: 417 VLSYEDGKFHLGDRVEVGNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ V V + + D L++++ L L Sbjct: 477 VARPQITSRGF-VFVKTNRELMNQAADLVEKVVQEDLDQKEFDWGHLKQNVRDKLNRFLF 535 Query: 540 KVWGKKPLVTVFINKISRQ 558 + P++ I +I++ Sbjct: 536 NQTKRHPVILPVIMEINQH 554 >gi|166369008|ref|YP_001661281.1| hypothetical protein MAE_62670 [Microcystis aeruginosa NIES-843] gi|166091381|dbj|BAG06089.1| hypothetical protein MAE_62670 [Microcystis aeruginosa NIES-843] Length = 582 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 169/563 (30%), Positives = 301/563 (53%), Gaps = 22/563 (3%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M ++ L +PLGG+ EIG N ++ Y + I++D G++FP DD+ GV++V P Sbjct: 1 MNQDKTQAKLKIIPLGGLHEIGKNTCVFEY----DDEIILLDAGLAFPSDDMHGVNVVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVS 115 D+T++ + R + + +TH HEDH G + VP+ Y A+ LL K ++ Sbjct: 57 DMTYLRENRHKIKGMIVTHGHEDHIGGIPYHLKQFDVPIIYGPRLAMALLRDKLEEAGLA 116 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D + Sbjct: 117 NRTKLETVAPRQMVRLGKSFMVEYIRNTHSIADSFCVAIHTPLGVVIHTGDFKIDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D + G +G+L L+ DSTNA G SE + + + A G +++TTF+ Sbjct: 177 GEFFDLQKIAEHGEKGVLCLLSDSTNAEVPGYTPSEASVYPGLERVFNQATGRIMITTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV RI ++ +A++ RK+V++G S+ V++ A ++G IK D LF ++ ++ Sbjct: 237 SSVHRINLVLKLAQKFNRKVVVVGRSMLNVIAHARNLGYIKCPDDLFEPLKATRNLADDK 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGEP +A+ ++S+GE ++++ + DT++FS+ IPGN +A+ + +RL+ QG Sbjct: 297 IVILTTGSQGEPLAAMTRISKGEHPHIRVRQGDTIVFSANPIPGNTIAVVNTIDRLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 V+ + +HVSGH D K M RP+ V +HGE LV H ++A GI Sbjct: 357 ANVVYGR-DKGIHVSGHGSQEDHKLMLSLTRPKFFVPVHGEHRMLVKHAQMAQSMGIPAE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + V+NG + L D I + V G+ L D + + + +R+QL+ G +++ Sbjct: 416 NMVIVKNGDTIELTGDRIGLGTPVPSGIELVDQAGV--VHEHIMQERQQLAEDGVITIAT 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRR-----KDLKLL 526 ++ + PEI G+ + +++L+++ + + D + D L Sbjct: 474 FVNGEGQLSAPPEINLRGVVTKV-EISLLNQLIIRAIERCLSDRIGEFKTATGATDWAGL 532 Query: 527 RESISSALRSLLKKVWGKKPLVT 549 R I + L+ L+K+ +PLV Sbjct: 533 RAEIETTLQRLIKRELQSQPLVI 555 >gi|283956166|ref|ZP_06373651.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792320|gb|EFC31104.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 1336] Length = 662 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 166/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I+ID G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIIDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKIGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|218247709|ref|YP_002373080.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801] gi|257060954|ref|YP_003138842.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] gi|218168187|gb|ACK66924.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801] gi|256591120|gb|ACV02007.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] Length = 588 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 178/575 (30%), Positives = 311/575 (54%), Gaps = 26/575 (4%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M + L +PLGG+ EIG N ++ YG + I++D G++FP + + GV++V P Sbjct: 1 MSQNQTQPTLKIIPLGGLHEIGKNTCIFEYG----DEIILLDAGIAFPTEGMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVS 115 D+T++ + R + + TH HEDH G + +P+ Y AI LL K +S Sbjct: 57 DMTYLRENRHKIQGMIATHGHEDHIGGIPYHLKQFDIPIIYGPKLAIALLRDKLEEAGLS 116 Query: 116 KKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + + V + +F +E +R HSI ++ + I +P+G I+HTGD+K+D + Sbjct: 117 DRTTLKTVSPREMVRISESFLVEFIRNTHSIADSFTVAIHTPLGVIIHTGDFKIDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D L G +G+L L+ DSTNA G+ SE+ + N+ I+ A G +L+TTF+ Sbjct: 177 GEYFDLQKLAEHGEKGVLCLLSDSTNAEVPGSTPSERSVYPNLDRIIHQAPGRLLITTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV R+ I+ +A + RK+ ++G S+ V++ A ++G IK D +F+S ++ P E+ Sbjct: 237 SSVHRVNMILQLAHKHQRKVAVVGRSMLNVIAHARELGYIKCPDDVFISLKAARNLPDEK 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGEP +AL ++S G ++K+ DTV+FS+ IPGN +A+ + +RL+ QG Sbjct: 297 VLILTTGSQGEPLAALTRISWGAHPHIKIRPGDTVVFSANPIPGNTIAVVNTIDRLMIQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 VI + +HVSGH + K M RP+ + +HGE LV H + A GI Sbjct: 357 AEVIYGRHQG-IHVSGHGAQEEHKLMLALTRPKFFIPVHGEHRMLVKHAQTAQSMGIPAE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + + NG +++L PD I++I +V G+ L D I D + R+QL+ G ++V Sbjct: 416 NMVIIDNGDIVQLSPDSIDVIGKVPSGIELVDQAGI--VHDHVMQDRQQLAEQGVVTVAA 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD--------LPQFRRKDL 523 + + PE+ G+ + + +L+++ + + D + D Sbjct: 474 AVSWEGKLMAQPEVHLRGVVTKV-ERSLLQQLIIRAIERLLSDRWDEFAHTNGNGTQIDW 532 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 ++R+ + + L+ L+++ +P+V VF+ +I Q Sbjct: 533 SMVRDEVENTLQRLIRRELRIEPMV-VFLLQIPEQ 566 >gi|283953679|ref|ZP_06371210.1| hypothetical protein C414_000010043 [Campylobacter jejuni subsp. jejuni 414] gi|283794720|gb|EFC33458.1| hypothetical protein C414_000010043 [Campylobacter jejuni subsp. jejuni 414] Length = 609 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 289/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 57 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 112 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 113 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 172 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ VG I+HTGD+K+D I G TD Sbjct: 173 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKVGTIIHTGDFKIDQTPIDGYPTDL 232 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 233 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 292 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 293 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 352 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 353 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 412 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 413 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 471 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ + V G D + + AD + R++L+ G + + +D Sbjct: 472 DGDQVELCQKYVKRVKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 531 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 532 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 590 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 591 HIFRKIKKYPTIVPTI 606 >gi|257070012|ref|YP_003156267.1| putative hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] gi|256560830|gb|ACU86677.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] Length = 561 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 287/558 (51%), Gaps = 17/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + + LGG+GE+G NM ++ + K +++DCGV FP++ PG+D++ PD T Sbjct: 14 LPKNGMRITALGGLGEVGRNMTVFEHA----GKLMIVDCGVLFPEEHQPGIDVILPDFTS 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I ++ I +TH HEDH G + L +P+ S + + AK R++ K Sbjct: 70 IRDRLDDIECIVLTHGHEDHIGGVPYLLKERADIPLIGSELTLAFITAKLKEHRITPKTI 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + AG K G F +E V VNHSIP+++A+ +R+ G ++HTGD+K+D + G +TD Sbjct: 130 QVE--AGQKHKAGVFDLEFVAVNHSIPDSLAVFLRTRAGTVLHTGDFKMDQFPLDGRITD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ + DSTNA G +SE+ + I + ++ ++V++F+S V R Sbjct: 188 LRAFARLGEEGVDLFLTDSTNAEVPGFTMSERDLNPAIDQVFTSSPRRIIVSSFASHVHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I+ +++ A GRK+ +G S+ R + +A D+ + L + P ++ +I Sbjct: 248 IQQVLNAAHANGRKVAFVGRSMVRNMGIARDLEYLDIPKGLVVDFRKIQSMPDHKVTLIC 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +ALA+++ G+ +++ E DTV+ +S IPGNE AI I N+L + G ++ Sbjct: 308 TGSQGEPMAALARMANGDH-QIQVGEGDTVLMASSLIPGNENAIYGIINKLTDLGANIVH 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + VHVSGH +L Y +RP+ ++ +HGE HL A+ ELA + G+ + Sbjct: 367 KG-NAKVHVSGHASAGELVYCYNIVRPKNVMPVHGESKHLHANAELARRTGVPEKNIVIA 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 ++G + L +I +V GL DG IG + +A+RR LS G ++V L+D Sbjct: 426 QDGVTVDLVAGQAKISGKVEAGLVYVDGQTIGTATEDTLAERRMLSGGGVVTVVALIDPK 485 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 Y E + G + V + +D+ + + I + Sbjct: 486 SYKPVEPVEFLSKGFVHDKR----TFEGAEAQVNKALARAKSDNVEDIAEIEDIIVETVG 541 Query: 536 SLLKKVWGKKPLVTVFIN 553 S L++ + ++P V + Sbjct: 542 SYLRRTYRREPAVQAVVV 559 >gi|148926801|ref|ZP_01810480.1| hypothetical protein Cj8486_1759c [Campylobacter jejuni subsp. jejuni CG8486] gi|145844526|gb|EDK21633.1| hypothetical protein Cj8486_1759c [Campylobacter jejuni subsp. jejuni CG8486] Length = 664 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 112 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 167 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 168 RKIKDKICGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 227 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 228 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 287 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 288 GRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRV 347 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 348 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 407 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 408 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 467 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 468 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 526 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 527 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 586 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 587 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 645 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 646 HIFRKIKKYPTIVPTI 661 >gi|46199081|ref|YP_004748.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55981109|ref|YP_144406.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] gi|46196705|gb|AAS81121.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55772522|dbj|BAD70963.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] Length = 573 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 287/561 (51%), Gaps = 22/561 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +PLGG+GEIG N+ ++ + + ++D G++FP++ +PGVDL+ P + +++ Sbjct: 25 QDHVEIIPLGGMGEIGKNITVFRF----RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLI 80 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSKK 117 + R + A +TH HEDH G L L + VP+Y + +GLL K + Sbjct: 81 EHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPG 140 Query: 118 IPC-ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 D++ VG F+++ R+ HSIP+ +VIR+P+G IVHTGD+KLD I G Sbjct: 141 AFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDG 200 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 V+ + G EG+L L+ D+TNA R G SE I K + ++ A G V VTTF+S Sbjct: 201 KVSHLAKVAQAGAEGVLLLIADATNAERPGYTPSEMEIAKELDRVIGRAPGRVFVTTFAS 260 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + RI+S+I AE+ GRK+ + G S+ + +A+++G +K + E P Q++ Sbjct: 261 HIHRIQSVIWAAEKYGRKVAMEGRSMLKFSRIALELGYLKVKDRLYTLEEVKDLPDHQVL 320 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ATGSQG+P S L +L+ + + DTVI SS IPGNE A+ + NRL G Sbjct: 321 ILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAY 380 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 V+ VH SGH +LK + P+ + HGE H + K LA Sbjct: 381 VLY-PPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKWLAESMSRPPEKT 439 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG + RL + E + EV HG+ DG +G + +A RR ++ G + + L Sbjct: 440 LIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVITALA 499 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 V E+V G G ++ + + + + + + ++ L+ +R+ I Sbjct: 500 GED----PVVEVVSRGFV---KAGERLLGEVRRMALEALKNGVREKKP-LERIRDDIYYP 551 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 ++ LKK G+ P++ + + Sbjct: 552 VKKFLKKATGRDPMILPVVIE 572 >gi|251773185|gb|EES53738.1| Metallo-beta-lactamase family protein [Leptospirillum ferrodiazotrophum] Length = 580 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 186/554 (33%), Positives = 305/554 (55%), Gaps = 11/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GE+GMNM +Y + + I++DCGV FP+DDL G+DL+ PD +++M+ R Sbjct: 32 LKIIPLGGLGEVGMNMTVYE----TEGRIIVVDCGVLFPEDDLLGIDLIIPDFSYLMENR 87 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISFQ 124 ++ +F+TH HEDH GA+ VPV +P +GLLE+K R +++P I+ Sbjct: 88 DRILGLFLTHGHEDHIGAVPYFLREFDVPVLGTPLTLGLLESKLRQTRKPEEMPKLITLT 147 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G F +E +R+ HSI + +A IR+ G ++HTGD+K+D I D C Sbjct: 148 PRQEYLMGPFGVEPIRITHSIADGVAFAIRTSSGTVLHTGDFKIDLTPIDDLHIDIHRFC 207 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EGI+AL+ DSTN+ +EG +SEK + +N+ +++A G V+V+TFSS++ R++ + Sbjct: 208 TLGEEGIVALLSDSTNSEKEGLSLSEKLVGENLDRFIRDAPGRVIVSTFSSNIHRLQQVA 267 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GR I G S++ VA ++G + + ++ P E++ ++ TGSQG Sbjct: 268 DVAIRHGRSIAFNGRSMETNYRVASELGHLHIPADKVIKIDAVSSLPPEKVAILTTGSQG 327 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP S L +++ + +++ + DTV+ SSR IPGNE AI I N L+ +G V Sbjct: 328 EPMSGLFRMAVSDHKHISIGPGDTVLLSSRVIPGNERAIDRIINLLLRKGAMVHFRAI-S 386 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 +HVSGH D K M + +RP+ V IHGE HL AH A + GI + + NG + Sbjct: 387 DIHVSGHASAEDQKLMIRMLRPRHFVPIHGEFRHLSAHARTARKMGIPPERIHQIENGDV 446 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L + + + V G L DG +G+ + I R++L+ G ++V + L + I Sbjct: 447 LEIDREGAHVSGRVAAGRTLIDGKNVGEIGEGVIRDRKRLASDGMVTVILGLSRQNGEIV 506 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE+ G+ + ++ L+ V R ++ L+ I + LR KK Sbjct: 507 VGPEVFSRGVAPQER-SAELDGLVRAQVQLAFDAAEPEIRSEIPALKTRIHNHLRKFFKK 565 Query: 541 VWGKKPLVTVFINK 554 + + P++ I + Sbjct: 566 QFHRDPMILPVILE 579 >gi|301299250|ref|ZP_07205536.1| putative Ribonuclease J 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853094|gb|EFK80692.1| putative Ribonuclease J 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 565 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 151/560 (26%), Positives = 264/560 (47%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E NM + ++DCG+ +P+++L G+D V PD +++ + Sbjct: 3 DIKIISLGGVRENAKNMYAVE----VDDEIFILDCGLKYPENELLGIDFVIPDFSYLREN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + ++ +F+TH H D GAL S VPV+ S I L + E K Sbjct: 59 SRKIVGVFLTHGHADAIGALPYFVSEFDVPVFGSELTIELAKIACENEEDARKFDDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D +I + HSIPE++ +VI++ GN+V+TGD+K D A G TD L Sbjct: 119 DESTEIDFENATISFFQTTHSIPESLGVVIKTENGNVVYTGDFKFDQSAEKGYRTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA ++E+ I I + + KG ++V +S++ R++ I Sbjct: 179 TEIGREGVLALLSESANAENPRETVNERAIYDFISENFEYRKGRIIVACVASNILRVQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 + A RK+ L G +++VV A+ + + ++ L + + Y ++++++ TG Sbjct: 239 FNAAAANNRKVALTGHDVEKVVKTAMRLNKLVLPEEDLLIPIKKINDYNDDEIVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G R V L E D V ++ E + ++ + G V A Sbjct: 299 SGEPLKSLQKMAMGRHRFVNLHEGDLVFITTTPSHAMETKVARTRDMIYRSGADVKAIFD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E ++ SGH NDL+ M ++P+ ++ + GE L AH ELA + GI + ++ G Sbjct: 359 E--LNSSGHASKNDLQLMMNLVKPRYVIPVQGEYRMLSAHAELARELGIPSENIFLLKKG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 +L D + I V G + DG +G ++ + R+ LS G V +D Sbjct: 417 DVLEYKKDEMTISSSVEVGNTMIDGTGVGDIGNIVLRDRKILSEDGIFIAVVTIDRKKRK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + V V + D L++ I L + L Sbjct: 477 IVDTPKITSRGF-VYIKTSKDLMVESRDIVAKIVQRDLDNKEFDWSQLKQDIRENLNNFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + + P++ I +I++ Sbjct: 536 YEQTKRHPVILPVIMEINQN 555 >gi|15924265|ref|NP_371799.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926858|ref|NP_374391.1| hypothetical protein SA1118 [Staphylococcus aureus subsp. aureus N315] gi|21282887|ref|NP_645975.1| hypothetical protein MW1158 [Staphylococcus aureus subsp. aureus MW2] gi|49486114|ref|YP_043335.1| hypothetical protein SAS1209 [Staphylococcus aureus subsp. aureus MSSA476] gi|151221396|ref|YP_001332218.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus str. Newman] gi|156979596|ref|YP_001441855.1| hypothetical protein SAHV_1265 [Staphylococcus aureus subsp. aureus Mu3] gi|161509441|ref|YP_001575100.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142509|ref|ZP_03567002.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316411|ref|ZP_04839624.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006062|ref|ZP_05144663.2| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|262048164|ref|ZP_06021051.1| hypothetical protein SAD30_1940 [Staphylococcus aureus D30] gi|262051337|ref|ZP_06023560.1| hypothetical protein SA930_2059 [Staphylococcus aureus 930918-3] gi|284024268|ref|ZP_06378666.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 132] gi|294848271|ref|ZP_06789018.1| ribonuclease J 2 [Staphylococcus aureus A9754] gi|295406212|ref|ZP_06816019.1| ribonuclease J 2 [Staphylococcus aureus A8819] gi|296274833|ref|ZP_06857340.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus MR1] gi|297244440|ref|ZP_06928323.1| ribonuclease J 2 [Staphylococcus aureus A8796] gi|81649408|sp|Q6G9T8|RNJ2_STAAS RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|81704471|sp|Q7A115|RNJ2_STAAW RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|81705783|sp|Q7A5X6|RNJ2_STAAN RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|81781692|sp|Q99UJ7|RNJ2_STAAM RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|147742893|sp|Q2YXP1|RNJ2_STAAB RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|147742894|sp|Q2FHG3|RNJ2_STAA3 RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|147742895|sp|Q2FZ19|RNJ2_STAA8 RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|147742896|sp|Q5HGF6|RNJ2_STAAC RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|13701075|dbj|BAB42370.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus N315] gi|14247045|dbj|BAB57437.1| similar to metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204326|dbj|BAB95023.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus MW2] gi|49244557|emb|CAG42986.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|150374196|dbj|BAF67456.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus str. Newman] gi|156721731|dbj|BAF78148.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368250|gb|ABX29221.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|259160712|gb|EEW45733.1| hypothetical protein SA930_2059 [Staphylococcus aureus 930918-3] gi|259163730|gb|EEW48285.1| hypothetical protein SAD30_1940 [Staphylococcus aureus D30] gi|269940766|emb|CBI49148.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus TW20] gi|283470490|emb|CAQ49701.1| RNA-metabolising metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ST398] gi|285816957|gb|ADC37444.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Staphylococcus aureus 04-02981] gi|294825071|gb|EFG41493.1| ribonuclease J 2 [Staphylococcus aureus A9754] gi|294968800|gb|EFG44822.1| ribonuclease J 2 [Staphylococcus aureus A8819] gi|297178470|gb|EFH37716.1| ribonuclease J 2 [Staphylococcus aureus A8796] gi|298694567|gb|ADI97789.1| Zn-dependent hydrolase [Staphylococcus aureus subsp. aureus ED133] gi|302332881|gb|ADL23074.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302751098|gb|ADL65275.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312829669|emb|CBX34511.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131069|gb|EFT87053.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus CGS03] gi|315198517|gb|EFU28846.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus CGS01] gi|323441057|gb|EGA98764.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O11] gi|323443926|gb|EGB01537.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O46] gi|329313945|gb|AEB88358.1| Beta-lactamase domain protein [Staphylococcus aureus subsp. aureus T0131] gi|329727047|gb|EGG63503.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus 21172] gi|329727859|gb|EGG64310.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus 21189] gi|329733538|gb|EGG69866.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus 21193] Length = 557 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 63 LENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 123 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 303 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 421 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|257425329|ref|ZP_05601754.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427990|ref|ZP_05604388.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430623|ref|ZP_05607005.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433383|ref|ZP_05609741.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257436225|ref|ZP_05612272.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|282903830|ref|ZP_06311718.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus C160] gi|282905593|ref|ZP_06313448.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908568|ref|ZP_06316398.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910847|ref|ZP_06318650.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914052|ref|ZP_06321839.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus M899] gi|282918974|ref|ZP_06326709.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus C427] gi|282924097|ref|ZP_06331773.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus C101] gi|283958018|ref|ZP_06375469.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus A017934/97] gi|293501084|ref|ZP_06666935.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510046|ref|ZP_06668754.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus M809] gi|293526632|ref|ZP_06671317.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus M1015] gi|297591280|ref|ZP_06949918.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus MN8] gi|257271786|gb|EEV03924.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274831|gb|EEV06318.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278751|gb|EEV09370.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281476|gb|EEV11613.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257284507|gb|EEV14627.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|282314069|gb|EFB44461.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus C101] gi|282316784|gb|EFB47158.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus C427] gi|282322120|gb|EFB52444.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus M899] gi|282325452|gb|EFB55761.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282327630|gb|EFB57913.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330885|gb|EFB60399.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595448|gb|EFC00412.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus C160] gi|283790167|gb|EFC28984.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus A017934/97] gi|290920704|gb|EFD97767.1| ribonuclease J 2 (RNase J2) [Staphylococcus aureus subsp. aureus M1015] gi|291096089|gb|EFE26350.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466990|gb|EFF09508.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus M809] gi|297576166|gb|EFH94882.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus MN8] gi|312438345|gb|ADQ77416.1| ribonuclease [Staphylococcus aureus subsp. aureus TCH60] Length = 574 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 278/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKEKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|161507332|ref|YP_001577286.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DPC 4571] gi|160348321|gb|ABX26995.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DPC 4571] Length = 544 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 160/548 (29%), Positives = 284/548 (51%), Gaps = 13/548 (2%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 + EIG NM Y + I++DCG+ FP+DDL G++ V D ++++K RK + A+ + Sbjct: 1 MHEIGKNMYCVQY----QDEIIIMDCGIKFPEDDLLGINYVISDYSYLIKNRKKIKALVV 56 Query: 74 THAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +H HEDH G + L + +PVYA+PFA+ L+ K + K + Sbjct: 57 SHGHEDHIGGIPFLLEKIPEIPVYATPFALSLIRGKLEEHGILKTTELHEEHEDTVLKFK 116 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGNEGI 191 S+ R HSIP+T+ + + +P+G +V TGD+K D ++ D + +G EG+ Sbjct: 117 KLSVSFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAPDFQKMAQLGKEGV 176 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 LAL+ DSTNA SE+ + +++++I+ G ++ TF+S++ R+ + I A IG Sbjct: 177 LALLSDSTNAEVTQFTKSERFVAQSLHNIITGIHGRIIFATFASNLYRVSTAIQAAIDIG 236 Query: 252 RKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 RK+ + G S++ V+ ID+G + L ++ E P ++++++ TGSQGEP +AL+ Sbjct: 237 RKVAIFGRSMENGVANGIDLGYLNVPKDLIVNAEEINKLPPDKVMILCTGSQGEPLAALS 296 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 +++ G R + L DTVIFSS IPGN +++ H+ N+L+E G VI VH SGH Sbjct: 297 RIANGTHRQITLQPGDTVIFSSNPIPGNTLSVNHLINKLMEGGANVIHGRVN-NVHTSGH 355 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDP 428 +LK M + +P+ ++ +HGE V H +LA + G+ + NG+++ P+ Sbjct: 356 GGQEELKMMVRLSKPKYMIPVHGEYRMQVIHTQLAQEAGVPAENTFVLSNGEVVCFGPNG 415 Query: 429 IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVD 487 I + G D ++ + R+ LS G + +D H + P+I+ Sbjct: 416 ARIAGRIPAGDVYVDTSGTADVDNVVVHDRQILSEEGLVVAVATVDYKHKRVLAGPDILS 475 Query: 488 IGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 G Y + ++ + K V + + + + + ++++IS L L ++P Sbjct: 476 RGF-VYMRESTELINQVQKHVYHVLRNEMAKSDKPKESDIKKAISENLSDFLYSKTERRP 534 Query: 547 LVTVFINK 554 ++ I + Sbjct: 535 MILPIIIE 542 >gi|119485218|ref|ZP_01619603.1| hypothetical protein L8106_07209 [Lyngbya sp. PCC 8106] gi|119457446|gb|EAW38571.1| hypothetical protein L8106_07209 [Lyngbya sp. PCC 8106] Length = 617 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 293/558 (52%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ + R Sbjct: 28 LKIIPLGGLHEIGKNTCVFEY----DDEIILLDAGLAFPTDGMHGVNIVLPDVTYLRENR 83 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +TH HEDH G + +P +Y A+ LL+ K VS + S + Sbjct: 84 HKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLQGKLEEAGVSDRTELRSVR 143 Query: 125 AGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + V +G F +E +R HSI ++ + I +PVG ++H+GD+K+D + G+ D L Sbjct: 144 PREIVRIGKSFLVEYIRNTHSIADSFTVAINTPVGVVIHSGDFKIDHTPVDGEHFDLQRL 203 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+ L+ DSTNA G SE + N+ I A G +LVTTF+SSV R+ I Sbjct: 204 AEYGEKGVQCLLSDSTNAEVPGFTPSESSVYPNLDRIFSQAPGRILVTTFASSVHRLNII 263 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQ 302 +DIA++ GR + ++G S+ V++ A ++G IK D LF+ + P ++++++ TGSQ Sbjct: 264 LDIAQKQGRSVAVVGRSMLNVIAHARNLGYIKCQDDLFIPLNTLRDTPDDKVLILTTGSQ 323 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SA+ +++ G R + + + DTV+FS+ IPGN +A+ + ++L+ G VI Sbjct: 324 GEPLSAMTRIANGAHRQINIKQGDTVVFSANPIPGNTIAVVNTIDKLMMLGANVIYGRHH 383 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH D K M RP+ V +HGE L+ H ++A GI + + NG Sbjct: 384 G-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLIKHSQIAQSMGIPAENMIIIDNGD 442 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L D I +ID V G+ D G D + +RRQL+ G ++V V +D + Sbjct: 443 VVELTKDSIGVIDRVKAGVEPVDSSRTGVVKDDVMQERRQLAEDGVVTVAVAVDLEGKLI 502 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD--------LPQFRRKDLKLLRESISS 532 P+I G+ D + + K + +T+ + + D + + Sbjct: 503 AQPKIHFRGVVTSV-DQTVLQMSINKAIESTLNNRWSEFVRSFEGQKEVDWVGVETQVER 561 Query: 533 ALRSLLKKVWGK-KPLVT 549 A+ LK+ + PLV Sbjct: 562 AIERSLKRELNRSNPLVV 579 >gi|296536140|ref|ZP_06898268.1| beta-lactamase domain protein [Roseomonas cervicalis ATCC 49957] gi|296263511|gb|EFH10008.1| beta-lactamase domain protein [Roseomonas cervicalis ATCC 49957] Length = 553 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 196/558 (35%), Positives = 318/558 (56%), Gaps = 14/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N + F+PLGG GEIG+N+ +Y + + +DCG+ F + P +++ PD ++ Sbjct: 5 NGDFAFIPLGGTGEIGLNLNVYR----CDGQLLAVDCGIGFGGAEQPEAEVMVPDPAWLA 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + R L+ + ITHAHEDH GA+ LW L PVYASPF +L K + ++ ++ Sbjct: 61 ERRDRLVGLVITHAHEDHIGAVAPLWPHLRCPVYASPFTAAVLRRKLSEAGLLNQVKLVT 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G V++G F + +RV HS+PE +L IR+ G ++HTGDWKLD D ++G+ D+ + Sbjct: 121 VPLGGSVELGPFGLRFIRVTHSVPEPQSLAIRTRYGTVLHTGDWKLDPDPLVGEPADEAA 180 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A+G EG+LA++CDSTNA+ EG SE +++N+ +++ KG V VT F+++V+R+ S Sbjct: 181 FAALGEEGVLAMVCDSTNALVEGHSGSEGEVRRNMTALIRQLKGRVAVTCFATNVARVES 240 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + A+ GR++ L G SL+ + A + G +K FL+++ P +QL++I TGSQ Sbjct: 241 VALAAKAAGRQVALFGRSLRNAEAAARECGYLKDVPPFLTEDDADDVPDDQLLIICTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPRSA+A+++ + L E DTVIFSSR IPGNE AI +++ L G +V+ + Sbjct: 301 GEPRSAMAKIAADTHPRISLGEGDTVIFSSRMIPGNERAILRMQDDLTRGGCKVMT-ADD 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++LKR+Y ++P+ V +HGE HL H LA Q G V V +G +L Sbjct: 360 HMVHVSGHPARDELKRLYSLVKPRFAVPVHGEWRHLQEHAALARQMGSTPV-LVEDGDVL 418 Query: 423 RLFP-----DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 RL P E+++ V G + DG + + RR++ F G + ++ +D Sbjct: 419 RLAPLAGGNAAPEVVEGVPTGQLVLDGDRLLPLEGGVLGARRRMLFNGIVVASLAVDPSG 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P++ G+ D + + + V +LP +++ LR++ + LR Sbjct: 479 RVLGQPQVSAPGL-FDMADVEPVQ--IADELARLVTELPPELKREDDTLRDAARTVLRKA 535 Query: 538 LKKVWGKKPLVTVFINKI 555 + + K+P V V + ++ Sbjct: 536 VSRRLRKRPAVEVHLLRV 553 >gi|254551811|ref|ZP_05142258.1| hypothetical protein Mtube_15352 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 558 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 279/555 (50%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ K R++ + + Sbjct: 72 DDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITP--VFVEVR 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G G F E VNHS P+ +A+ + + G I+HTGD K D G TD + Sbjct: 130 EGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +GN G+ L+CDSTNA G SE + ++ +++ A G V+V F+S+V R++ II Sbjct: 190 RLGNTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + VA +G ++ D + + +Q+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D ++ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILS-SGFVAVTVVVRRGTGQPL 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 AAPHLHSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|217979064|ref|YP_002363211.1| beta-lactamase domain protein [Methylocella silvestris BL2] gi|217504440|gb|ACK51849.1| beta-lactamase domain protein [Methylocella silvestris BL2] Length = 556 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 224/553 (40%), Positives = 343/553 (62%), Gaps = 1/553 (0%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N+ELVF PLGG+GEIGMN+ALYG+G KW+M+DCG++F + G+D++ PD++FI Sbjct: 5 NDELVFAPLGGLGEIGMNLALYGFGPKGRMKWLMVDCGIAFAGPEHAGIDIIIPDVSFIE 64 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K R++L+ + ITHAHEDH GA+ D+W L P+YA+ FA LL KR+ E + ++P Sbjct: 65 KMREDLVGLVITHAHEDHIGAVADIWPKLGCPLYATRFAAQLLRTKRLSEPGAPEVPIEI 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G + VG F++E + + HSIPE+ AL IR+P+G ++H+GDWK+D + LG TD Sbjct: 125 VPQGGHIKVGPFAVEFIAMAHSIPESCALAIRTPLGTVIHSGDWKIDAEPGLGAPTDARR 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG+EG+LAL+CDSTN +REG SE + + + +++ G V+VTTF+S+V+RIR+ Sbjct: 185 LSEIGDEGVLALVCDSTNILREGISPSEGEVARTLREVIAGTTGRVVVTTFASNVARIRA 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + A GR +VL G +++RVV+VA D G + F ++F PR+++ +IATGSQ Sbjct: 245 VALAAAAAGRSVVLAGRAMERVVAVARDCGYLDGVPDFFGIDAFAHLPRDRVALIATGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+A+A++S GE + L D VIFSSR IPGNE +G I N + G+ ++ + Sbjct: 305 GEPRAAIARISEGEHPAISLTAGDKVIFSSRTIPGNEREVGRIINNFIRSGIEIVTDR-N 363 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VH SGHP ++ +Y W+RPQ+ + HGE LHL H A G+ V P RNG ++ Sbjct: 364 ALVHASGHPRRGEVSELYAWVRPQIAIPAHGEDLHLAEHAIFARAMGVPHVIPARNGDIV 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P I+ E G LKDG + D R++L+ G +++ + + ++ GV Sbjct: 424 ALAPGQAAIVGEAPSGRLLKDGNIFVSATDEAPRMRQKLAASGIITIALAVTAKGDLAGV 483 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 P+++ GIP G + ++ + T LP+ +R+D ++ +I A+R+ + + W Sbjct: 484 PDVMTAGIPTRGHGGAPMDAIVDDAMFQTFDHLPRQKRRDADVVSSAIEKAVRNAVAQAW 543 Query: 543 GKKPLVTVFINKI 555 GK+P V V + +I Sbjct: 544 GKRPSVHVLVVEI 556 >gi|242373567|ref|ZP_04819141.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] gi|242348930|gb|EES40532.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] Length = 573 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 23 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 78 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF++H HE GA+ + + PVY S I L++ + KK+ Sbjct: 79 IENKDKLKGIFLSHGHEHAIGAVSYVLEQIDAPVYGSKLTIALIKENMKARNIKKKVRYY 138 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 139 TVNHDSVMRFKNVNVSFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLHGQYAPDMK 198 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 199 RMAEIGDEGVFALISDSTEAEKPGYNTPENVIEHHMYDAFAKVKGRLIVSCYASNFIRIQ 258 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 259 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVDNYPKNEVIIIATG 318 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + + D+V + A EV I N LV G +I Sbjct: 319 MQGEPVEALSQMAQKKHKIMNIEDGDSVFLAITASANMEVIIADTLNELVRAGAHII--P 376 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 377 NNKKIHASSHGCMEELKMMLNIMKPEYFIPVQGEFKMQIAHAKLAAESGVAPEKIFLVEK 436 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 437 GDVINYDGKDMILNEKVNSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 496 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ + V T V Q +R + +++++ + L Sbjct: 497 RIAAGPEIQSRGF-VYVRESEELLNEAEEKVRTIVEAGLQEKRIEWSEIKQNMRDQISKL 555 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 556 LFESTKRRPMIIPVISEI 573 >gi|257795669|ref|ZP_05644648.1| beta-lactamase [Staphylococcus aureus A9781] gi|257789641|gb|EEV27981.1| beta-lactamase [Staphylococcus aureus A9781] Length = 574 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 276/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG +K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGGFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|296116520|ref|ZP_06835130.1| RNA-metabolising metallo-beta-lactamase protein [Gluconacetobacter hansenii ATCC 23769] gi|295976732|gb|EFG83500.1| RNA-metabolising metallo-beta-lactamase protein [Gluconacetobacter hansenii ATCC 23769] Length = 547 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 194/556 (34%), Positives = 316/556 (56%), Gaps = 10/556 (1%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M + EL FLPLGG GEIGMN+ LY G W+ +DCG+ F +D P +++ PD Sbjct: 1 MNDMTELEFLPLGGTGEIGMNLNLYRQG----ESWLAVDCGIGFSGNDTPEAEILLPDPV 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 FI + RK+L+ + ITHAHEDH GA+ LW L PVYA+PFA +L K ++ +++P Sbjct: 57 FISERRKDLVGLVITHAHEDHLGAVAHLWPQLGCPVYATPFAAAVLRRKLGEAQLLQQVP 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G VG F + + V HS+PE ALV+R+P G +VHTGDWK D + ++G TD Sbjct: 117 IHTIPTGGAFRVGEFDLSFIPVTHSVPEAQALVLRTPQGIVVHTGDWKFDPNPLVGPPTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+LA++CDSTN EG SE +++ + ++ +G V VT F+S+V+R Sbjct: 177 IAAFEVLGREGVLAMVCDSTNVRTEGPSASEADVRQEMTKLIATLEGRVAVTCFASNVAR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + +I A+ R + ++G SL+ + A + G + FLS++ P +Q+++I T Sbjct: 237 VETIAKAAKAANRVVAVVGRSLRNLEVAARECGYLSDVAPFLSEQEANSVPDDQILLIVT 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEPRSAL++++ N+ L E D VI+SSR IPGNE A+ +++ L +GV VI + Sbjct: 297 GSQGEPRSALSRIAVDTHPNISLGEGDNVIYSSRMIPGNEQAVIQVQDNLTRRGVNVITD 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + VHVSGH D++R+Y ++P+ LV +HGE HL A+ +A + I + + +G Sbjct: 357 R-DHLVHVSGHATGGDVRRLYAMVKPKYLVPVHGEWRHLTANAAIAQELDITPI-LLEDG 414 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L + +++D G + DG + + ++ RR++ F G + + +D + Sbjct: 415 DILNMKDASFDVVDTAPTGRLVLDGGRLLQMNGGVLSARRRMLFNGVVLGSFAVDEEGYL 474 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P++ G+ + + + ++P R++ R++ +ALR L Sbjct: 475 IGDPKVSAPGLL---DAEDPETARVTEEFGNALDEIPDELRENDVTFRDAAKTALRRALG 531 Query: 540 KVWGKKPLVTVFINKI 555 + K+PLV V + ++ Sbjct: 532 RKLQKRPLVDVHLLRV 547 >gi|85703315|ref|ZP_01034419.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] gi|85672243|gb|EAQ27100.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] Length = 537 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 187/538 (34%), Positives = 287/538 (53%), Gaps = 4/538 (0%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 MN +YGYG P + I++D GV+FP D PGVDL+ PDI+++ + L AIFITHAH Sbjct: 1 MNAYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDISWLEARKGQLEAIFITHAH 60 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 EDH GA+ + L PVYA F + K K + V G F++ Sbjct: 61 EDHVGAVAHYYGRLGAPVYARAFTANIARRKMEEHGHPDKAVKTVSPWPETVAAGPFTVG 120 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V ++HSIPE+ LVI S G IVHTGD+K+D D ++G+ D+D ++ G+ AL+CD Sbjct: 121 FVPLSHSIPESSGLVIDSAGGRIVHTGDFKIDLDPVVGEPFDRDLWASLSEPGVKALVCD 180 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STN SE + I D++ +KG + TTF+S+V+R++S+ + + GR + L+ Sbjct: 181 STNVFSHHEGRSESTVGGPITDLVAASKGMFVCTTFASNVARVKSLAEAGVRAGRSVCLM 240 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 G +++R++ A G++K +S E G PR+ L++I TGSQGE R+A AQL+ G+ Sbjct: 241 GRAMQRMIEAAQATGVLKGFPKTISPEEAGSVPRDSLMLIVTGSQGERRAASAQLANGKY 300 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + L + DT +FSS+ IPGNE + I N+ E GV V+ + HVSGH DL Sbjct: 301 NGIVLKDGDTFLFSSKTIPGNERGVIRIINQFSEMGVDVVEG--DDRYHVSGHANRPDLD 358 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 M++ I+PQ+++ +HGE HL H +LA + V NG M+ L +I + V Sbjct: 359 EMHKLIKPQMVIPMHGEHRHLREHVKLANANRLKGV-LAVNGMMIDLSGTAPKIAEYVET 417 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 G DG + D + R +++ GH+ +NV+LD G P + +G+ Sbjct: 418 GRTYLDGSVQVGAMDGVVRDRIRMALNGHVMINVILDEEDEPLGEPWVEVMGLAETGRSR 477 Query: 498 GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + +L + + + D L E + R + GK+P VTV I+++ Sbjct: 478 APLVDVLEEDLAQFMGRAGAKTLTDDDKLEEGLRRVARQSAQTEIGKRPEVTVVISRL 535 >gi|258447554|ref|ZP_05695698.1| metallo-beta-lactamase [Staphylococcus aureus A6300] gi|257853745|gb|EEV76704.1| metallo-beta-lactamase [Staphylococcus aureus A6300] Length = 574 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 276/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLCEAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|108799084|ref|YP_639281.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119868199|ref|YP_938151.1| beta-lactamase domain-containing protein [Mycobacterium sp. KMS] gi|126434690|ref|YP_001070381.1| beta-lactamase domain-containing protein [Mycobacterium sp. JLS] gi|108769503|gb|ABG08225.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119694288|gb|ABL91361.1| beta-lactamase domain protein [Mycobacterium sp. KMS] gi|126234490|gb|ABN97890.1| beta-lactamase domain protein [Mycobacterium sp. JLS] Length = 558 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ + + Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDLRHVEERL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH GA+ L +PV S F + L+ K R+ K + Sbjct: 72 DDVEALVLTHAHEDHIGAVPFLLKLRPDIPVVGSRFTLALVREKCREHRIKPK--FVEVA 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G + G F + VNHS+P +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGQRSTHGVFECQYFAVNHSVPGCLAIALHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA R G SE I ++ +++ A G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNADRPGVGPSESEIGPTLHRLIRGADGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G +K D L + + P E++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGYLKVDDSDLLDIGAAEMMPAEKVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L + D +I SS IPGNE A+ + + L + G RV+ Sbjct: 310 EPMSALSRMSRGEHRSITLTDGDLIILSSSLIPGNEEAVYGVIDSLSKIGARVVTNA-HA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y ++P+ ++ +HG HL A+ LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVKPRNVMPVHGTWRHLRANAALAERTGVPPESIVLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G + + +R LS G ++V V++ Sbjct: 429 VDLVAGKASIAGAVGVGKMFVDGLVTGDVGETTLGERLVLS-SGFVAVTVVVHRGTGRPA 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 G + G + K + + + V + L D + +++ + + + Sbjct: 488 GPAHLASRGFS----EDPKALEPVARKVEEELERLTADTVTDPGRIAQAVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + +I Sbjct: 544 TYRRQPMIVPTVIEI 558 >gi|15609889|ref|NP_217268.1| hypothetical protein Rv2752c [Mycobacterium tuberculosis H37Rv] gi|15842290|ref|NP_337327.1| hypothetical protein MT2822 [Mycobacterium tuberculosis CDC1551] gi|31793926|ref|NP_856419.1| hypothetical protein Mb2773c [Mycobacterium bovis AF2122/97] gi|121638630|ref|YP_978854.1| hypothetical protein BCG_2768c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662594|ref|YP_001284117.1| hypothetical protein MRA_2777 [Mycobacterium tuberculosis H37Ra] gi|148823940|ref|YP_001288694.1| hypothetical protein TBFG_12765 [Mycobacterium tuberculosis F11] gi|167968578|ref|ZP_02550855.1| hypothetical protein MtubH3_11293 [Mycobacterium tuberculosis H37Ra] gi|215404720|ref|ZP_03416901.1| hypothetical protein Mtub0_13738 [Mycobacterium tuberculosis 02_1987] gi|215412566|ref|ZP_03421294.1| hypothetical protein Mtub9_14460 [Mycobacterium tuberculosis 94_M4241A] gi|215428183|ref|ZP_03426102.1| hypothetical protein MtubT9_18033 [Mycobacterium tuberculosis T92] gi|215431692|ref|ZP_03429611.1| hypothetical protein MtubE_13696 [Mycobacterium tuberculosis EAS054] gi|218754492|ref|ZP_03533288.1| hypothetical protein MtubG1_14129 [Mycobacterium tuberculosis GM 1503] gi|219558760|ref|ZP_03537836.1| hypothetical protein MtubT1_16217 [Mycobacterium tuberculosis T17] gi|224991122|ref|YP_002645811.1| hypothetical protein JTY_2762 [Mycobacterium bovis BCG str. Tokyo 172] gi|254232850|ref|ZP_04926177.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365403|ref|ZP_04981448.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|260187769|ref|ZP_05765243.1| hypothetical protein MtubCP_17299 [Mycobacterium tuberculosis CPHL_A] gi|260201880|ref|ZP_05769371.1| hypothetical protein MtubT4_17740 [Mycobacterium tuberculosis T46] gi|260206063|ref|ZP_05773554.1| hypothetical protein MtubK8_17375 [Mycobacterium tuberculosis K85] gi|289444296|ref|ZP_06434040.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448408|ref|ZP_06438152.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289570930|ref|ZP_06451157.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575449|ref|ZP_06455676.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746555|ref|ZP_06505933.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis 02_1987] gi|289751409|ref|ZP_06510787.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289754857|ref|ZP_06514235.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289762924|ref|ZP_06522302.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994155|ref|ZP_06799846.1| hypothetical protein Mtub2_06483 [Mycobacterium tuberculosis 210] gi|298526219|ref|ZP_07013628.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777033|ref|ZP_07415370.1| hypothetical protein TMAG_03137 [Mycobacterium tuberculosis SUMu001] gi|306780936|ref|ZP_07419273.1| hypothetical protein TMBG_02889 [Mycobacterium tuberculosis SUMu002] gi|306785562|ref|ZP_07423884.1| hypothetical protein TMCG_01997 [Mycobacterium tuberculosis SUMu003] gi|306790158|ref|ZP_07428480.1| hypothetical protein TMDG_00464 [Mycobacterium tuberculosis SUMu004] gi|306794241|ref|ZP_07432543.1| hypothetical protein TMEG_03428 [Mycobacterium tuberculosis SUMu005] gi|306798659|ref|ZP_07436961.1| hypothetical protein TMFG_03648 [Mycobacterium tuberculosis SUMu006] gi|306804515|ref|ZP_07441183.1| hypothetical protein TMHG_01951 [Mycobacterium tuberculosis SUMu008] gi|306807445|ref|ZP_07444113.1| hypothetical protein TMGG_02118 [Mycobacterium tuberculosis SUMu007] gi|306968815|ref|ZP_07481476.1| hypothetical protein TMIG_02251 [Mycobacterium tuberculosis SUMu009] gi|306973148|ref|ZP_07485809.1| hypothetical protein TMJG_01735 [Mycobacterium tuberculosis SUMu010] gi|307080857|ref|ZP_07490027.1| hypothetical protein TMKG_03182 [Mycobacterium tuberculosis SUMu011] gi|307085448|ref|ZP_07494561.1| hypothetical protein TMLG_02465 [Mycobacterium tuberculosis SUMu012] gi|81669105|sp|O33294|Y2752_MYCTU RecName: Full=Putative ribonuclease J Rv2752c; Short=RNase J gi|2624274|emb|CAA15548.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13882584|gb|AAK47141.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis CDC1551] gi|31619520|emb|CAD94958.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494278|emb|CAL72756.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601909|gb|EAY60919.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134150916|gb|EBA42961.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148506746|gb|ABQ74555.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra] gi|148722467|gb|ABR07092.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224774237|dbj|BAH27043.1| hypothetical protein JTY_2762 [Mycobacterium bovis BCG str. Tokyo 172] gi|289417215|gb|EFD14455.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421366|gb|EFD18567.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289539880|gb|EFD44458.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289544684|gb|EFD48332.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289687083|gb|EFD54571.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis 02_1987] gi|289691996|gb|EFD59425.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695444|gb|EFD62873.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710430|gb|EFD74446.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|298496013|gb|EFI31307.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214545|gb|EFO73944.1| hypothetical protein TMAG_03137 [Mycobacterium tuberculosis SUMu001] gi|308326193|gb|EFP15044.1| hypothetical protein TMBG_02889 [Mycobacterium tuberculosis SUMu002] gi|308329747|gb|EFP18598.1| hypothetical protein TMCG_01997 [Mycobacterium tuberculosis SUMu003] gi|308333354|gb|EFP22205.1| hypothetical protein TMDG_00464 [Mycobacterium tuberculosis SUMu004] gi|308337378|gb|EFP26229.1| hypothetical protein TMEG_03428 [Mycobacterium tuberculosis SUMu005] gi|308341041|gb|EFP29892.1| hypothetical protein TMFG_03648 [Mycobacterium tuberculosis SUMu006] gi|308346174|gb|EFP35025.1| hypothetical protein TMGG_02118 [Mycobacterium tuberculosis SUMu007] gi|308348846|gb|EFP37697.1| hypothetical protein TMHG_01951 [Mycobacterium tuberculosis SUMu008] gi|308353567|gb|EFP42418.1| hypothetical protein TMIG_02251 [Mycobacterium tuberculosis SUMu009] gi|308357410|gb|EFP46261.1| hypothetical protein TMJG_01735 [Mycobacterium tuberculosis SUMu010] gi|308361363|gb|EFP50214.1| hypothetical protein TMKG_03182 [Mycobacterium tuberculosis SUMu011] gi|308364972|gb|EFP53823.1| hypothetical protein TMLG_02465 [Mycobacterium tuberculosis SUMu012] gi|323718600|gb|EGB27764.1| hypothetical protein TMMG_02760 [Mycobacterium tuberculosis CDC1551A] gi|326904367|gb|EGE51300.1| hydrolase [Mycobacterium tuberculosis W-148] Length = 558 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 279/555 (50%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ K R++ + + Sbjct: 72 DDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITP--VFVEVR 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G G F E VNHS P+ +A+ + + G I+HTGD K D G TD + Sbjct: 130 EGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ L+CDSTNA G SE + ++ +++ A G V+V F+S+V R++ II Sbjct: 190 RLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + VA +G ++ D + + +Q+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D ++ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILS-SGFVAVTVVVRRGTGQPL 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 AAPHLHSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|90961617|ref|YP_535533.1| metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227890704|ref|ZP_04008509.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus salivarius ATCC 11741] gi|90820811|gb|ABD99450.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227867642|gb|EEJ75063.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus salivarius ATCC 11741] gi|300214428|gb|ADJ78844.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius CECT 5713] Length = 565 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 151/560 (26%), Positives = 264/560 (47%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E NM + ++DCG+ +P+++L G+D V PD +++ + Sbjct: 3 DIKIISLGGVRENAKNMYAVE----VDDEIFILDCGLKYPENELLGIDFVIPDFSYLREN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + ++ +F+TH H D GAL S VPV+ S I L + E K Sbjct: 59 SRKIVGVFLTHGHADAIGALPYFVSEFDVPVFGSELTIELAKIACENEEDARKFDDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D +I + HSIPE++ +VI++ GN+V+TGD+K D A G TD L Sbjct: 119 DESTEIDFENATISFFQTTHSIPESLGVVIKTENGNVVYTGDFKFDQSAEKGYRTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA ++E+ I I + + KG ++V +S++ R++ I Sbjct: 179 TEIGREGVLALLSESANAENPRETVNERAIYDFISENFEYRKGRIIVACVASNILRVQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 + A RK+ L G +++VV A+ + + ++ L + + Y ++++++ TG Sbjct: 239 FNAAAANNRKVALTGHDVEKVVKTAMRLNKLVLPEEDLLIPIKKINDYNDDEIVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G R V L E D V ++ E + ++ + G V A Sbjct: 299 SGEPLKSLQKMAMGRHRFVNLHEGDLVFITTTPSHAMETKVARTRDMIYRSGADVKAIFD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E ++ SGH NDL+ M ++P+ ++ + GE L AH ELA + GI + ++ G Sbjct: 359 E--LNSSGHASKNDLQLMMNLVKPRYVIPVQGEYRMLSAHAELARELGIPSENIFLLKKG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 +L D + I V G + DG +G ++ + R+ LS G V +D Sbjct: 417 DVLEYKKDEMTISSSVEVGNTMIDGTGVGDIGNIVLRDRKILSEDGIFIAVVTIDRKKRK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + V V + D L++ I L + L Sbjct: 477 IVDTPKITSRGF-VYIKTSKDLMVESRDIVAKIVQRDLDNKEFDWSQLKQDIRENLNNFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + + P++ I +I++ Sbjct: 536 YEQTKRHPVILPVIMEINQN 555 >gi|57236896|ref|YP_179849.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|57165700|gb|AAW34479.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|315059156|gb|ADT73485.1| Zn-dependent hydrolase, RNA-metabolising [Campylobacter jejuni subsp. jejuni S3] Length = 662 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N++++ +++ I++D G+SFP + GVD++ PD ++ Sbjct: 110 SEHKIRITPLGGLGEIGGNISVFE----TNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYV 165 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + I ITHAHEDH GA+ + P+YA+P A+G++ K + + Sbjct: 166 RKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWF 225 Query: 122 SFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +V +G F IE + + HSI + AL I++ G I+HTGD+K+D I G TD Sbjct: 226 RPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDL 285 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G EG+L L+ DSTN+ +EG SE + I KG V+++TFSS++ R+ Sbjct: 286 GRLAYYGEEGVLCLLSDSTNSYKEGYTKSESSVGLTFDQIFARTKGRVIMSTFSSNIHRV 345 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIAT 299 I + GRK+ ++G S++R + +++G IK D ++F+ + Y +++++ T Sbjct: 346 YQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTT 405 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D VI S++AIPGNE ++ + + L++ G +V + Sbjct: 406 GSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQ 465 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH + K M +P+ + +HGE H+ HKE A++ GI + + Sbjct: 466 EF-SEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMS 524 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + L ++ I V G D + + AD + R++L+ G + + +D Sbjct: 525 DGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKAT 584 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ A D K + + + +++ D + L I LR Sbjct: 585 KTLINKPRVFSYGLVADKHDHA-FSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRK 643 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 644 HIFRKIKKYPTIVPTI 659 >gi|75909813|ref|YP_324109.1| hypothetical protein Ava_3608 [Anabaena variabilis ATCC 29413] gi|75703538|gb|ABA23214.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 589 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 162/575 (28%), Positives = 294/575 (51%), Gaps = 24/575 (4%) Query: 1 MKNEE----LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M E L +PLGG+ EIG N ++ Y + I++D G++FP + + GV++V P Sbjct: 1 MAKNETNAGLKIIPLGGLHEIGKNTCVFEY----DDEIILLDAGLAFPTEAMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 D+T++ + R + + +TH HEDH G + +P +Y A+ +LE K V Sbjct: 57 DMTYLRENRHKIKGMVVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVR 116 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + D V +G F +E +R HSI ++ + I +P+G ++HTGD+K D + Sbjct: 117 DRTELRKVLPRDVVRIGKSFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKFDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D L G +G+L L+ DSTN+ G SE + N+ + A+G + VTTF+ Sbjct: 177 GEKFDLQRLAEHGEKGVLCLLSDSTNSEVPGFTPSEASVFPNLDRVFSQAEGRLFVTTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQ 293 SSV RI I+ +A++ R + ++G S+ +++ A ++G IK + L P + Sbjct: 237 SSVHRINMILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLLQPLHMVRNLPDDN 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++V+ TGSQGE +A+ +++ E ++K+ + DTV+FS+ IPGN +A+ + ++L++QG Sbjct: 297 VLVLTTGSQGETMAAMTRIANKEHPHIKIRQGDTVVFSANPIPGNTIAVVNTIDKLMQQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 +V+ + +HVSGH D K M RP+ V +HGE LV H + A + GI Sbjct: 357 AKVVYGR-DQGIHVSGHGCQEDQKLMIALTRPKFFVPVHGEHRMLVKHSQTAQKSGIPAE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + ++NG ++ L D I + +V G+ L D G + + +R++++ G +++ Sbjct: 416 NMVIIQNGDIIELTEDSIRVAGKVQSGIELVDTTSSGMVSAKVLQERQRMAEEGLVTIAA 475 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV--------DLPQFRRKDL 523 +D + PEI G+ + + K + + + + + D Sbjct: 476 AIDWQGKLLAKPEIHLRGVVTSV-ERSLLQKWVQQRIEEILSVRWSEFATSEGEQPEIDW 534 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 L+ ++ L+ +++ +P VT + +I + Sbjct: 535 GGLQGTLERELQRSIRRELQCQPSVT-LLMQIPDE 568 >gi|258454775|ref|ZP_05702739.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] gi|257863158|gb|EEV85922.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] Length = 574 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 277/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 24 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 80 LENKGKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 139 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 140 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 199 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 200 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 259 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 260 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 319 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 320 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 377 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 378 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 437 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 438 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 497 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 498 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 556 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 557 LFESTKRRPMIIPVISEI 574 >gi|314936564|ref|ZP_07843911.1| ribonuclease J 2 (RNase J2) [Staphylococcus hominis subsp. hominis C80] gi|313655183|gb|EFS18928.1| ribonuclease J 2 (RNase J2) [Staphylococcus hominis subsp. hominis C80] Length = 557 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 155/558 (27%), Positives = 278/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNDDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF++H HE GA+ + + P+Y S + L++ + KK+ Sbjct: 63 VENKDKLKGIFLSHGHEHAIGAVSYILEQVDAPIYGSKLTLALVKESIKKRNIKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I +HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 TVNHDSVMRFKNVNITFFNTSHSIPDSLGICIHTSYGSIVYTGEFKFDQSLQGHYAPDMK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ AL+ DST A + G E I+ +IYD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ + A +G L L YP+ ++++IATG Sbjct: 243 QVLNIASKLNRKVSFLGKSLESSFNTARKMGYFDIPKDLLLPINEVENYPKNEVVIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +GEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 303 MEGEPIEALSQMAQHKHKILNIEEGDSVYLAITASANMEVIIANTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANEAGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVIHFDGSHMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELMKEAEDKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|49483438|ref|YP_040662.1| hypothetical protein SAR1251 [Staphylococcus aureus subsp. aureus MRSA252] gi|295427762|ref|ZP_06820394.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|81651255|sp|Q6GHG0|RNJ2_STAAR RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|49241567|emb|CAG40253.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|295128120|gb|EFG57754.1| ribonuclease J 2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|315194163|gb|EFU24556.1| hypothetical protein CGSSa00_05658 [Staphylococcus aureus subsp. aureus CGS00] Length = 557 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 278/558 (49%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ G+D+V PDI+++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGIDIVIPDISYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + L PVY S I L++ + KK+ Sbjct: 63 LENKEKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 123 TVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ L+ DST A + G E I+ ++YD +G ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 303 MQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG IG ++ + R L+ G V LD + Sbjct: 421 GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + + V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|84686455|ref|ZP_01014349.1| metallo-beta-lactamase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665638|gb|EAQ12114.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2654] Length = 554 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 191/558 (34%), Positives = 301/558 (53%), Gaps = 5/558 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M L++LPLGG GEIGMN +YGYG+P + I++D GV+FP + PGVDL+ D++ Sbjct: 1 MSKNRLIYLPLGGAGEIGMNAYVYGYGAPGKERLILVDLGVTFPDMETTPGVDLIMADVS 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++++ R L AIFITHAHEDH GA+ LWS L VPVYA F K Sbjct: 61 WLVENRDRLEAIFITHAHEDHVGAIGRLWSELRVPVYARAFTAHHARRKMEEAGQDPDEV 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +K++VG F + V ++HSIPE+ LVI +P G I H+GD+K+D D +G+ D Sbjct: 121 ITAGAYPEKIEVGPFKVAFVPISHSIPESAGLVIDTPAGRIAHSGDFKIDLDPGVGEAFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + A MCDSTN SE + I ++ +A V+ TTF+S+V+R Sbjct: 181 EAIWREATGGRVRAFMCDSTNVFSPKPGRSEAELGPEITKLVADAPHMVVATTFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++++ + + GR + LLG +++R++ ++D G++ ++ E PRE L++I T Sbjct: 241 VKTLAEAGQAAGRSVCLLGRAMRRMIEASVDTGVLTDFPKTVTPEDARDIPRESLMLIVT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A AQLSRG+ +++ E DT +FSS+ IPGNE + I N E GV ++A+ Sbjct: 301 GSQGERRAATAQLSRGKYLGLEMKEGDTFLFSSKTIPGNERGVIRILNAFSEMGVDIVAD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + HVSGH DL+RM++ + + +V +HGE HL H +LA G + NG Sbjct: 361 --DDRYHVSGHANRPDLERMHRIVGAETVVPMHGEHRHLREHAKLAKANGFQSI-VAVNG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 M+ L +++ + DG +I D + R +++ GH+ VN ++ Sbjct: 418 AMVDLTGATPHVVEHIEADRVYLDGKVIIGALDGIVRDRIRMALNGHVIVNAII-EDDAA 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P + +G+P + +L + + + + D L E + R + + Sbjct: 477 LGDPWVEVMGLPEVGESRAPLVDVLEEDLGQFLGRAGRKTLADDDKLEEELRRIARKVTQ 536 Query: 540 KVWGKKPLVTVFINKISR 557 GKK VTV I+++ Sbjct: 537 DEIGKKAEVTVVISRLEE 554 >gi|307151654|ref|YP_003887038.1| RNA-metabolising metallo-beta-lactamase [Cyanothece sp. PCC 7822] gi|306981882|gb|ADN13763.1| RNA-metabolising metallo-beta-lactamase [Cyanothece sp. PCC 7822] Length = 611 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 174/563 (30%), Positives = 304/563 (53%), Gaps = 22/563 (3%) Query: 1 MKNE----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M N +L +PLGG+ EIG N +Y Y + +M+D G++FP DD+ GV++V P Sbjct: 1 MSNNETQSKLKIIPLGGLHEIGKNTCIYEY----EDEILMVDAGIAFPTDDMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 ++T++ + + + + TH HEDH G + +P +Y P AI L+E K V+ Sbjct: 57 EMTYLRENHQKIKGMIATHGHEDHIGGIPYHLKQFEIPVIYGPPLAIALIEDKLEEAAVT 116 Query: 116 KKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + ++ + V VG F +E +R HS+ ++ L I +P+G ++HTGD+K+D I Sbjct: 117 GRTSLKTVRSREIVRVGKHFLVEFIRNTHSMADSFTLAIHTPIGILIHTGDFKIDHTPID 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G D L G +G+L L+ DSTN+ G SE + N+ I A+G +++TTF+ Sbjct: 177 GQHFDFHRLAEYGEKGVLCLLSDSTNSEVPGHTPSEASVYPNLDRIFAQAQGRIMLTTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV RI + ++++ RK+ ++G S+ V++ ++G IK D+LF+ ++ E+ Sbjct: 237 SSVHRINIALQLSQKHNRKVAVVGRSMLNVIAHCRNLGYIKCPDELFVPIKATKGLADER 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGEP +A+ +++ GE VK DT+IFS+ IPGN +A+ + ++L+ QG Sbjct: 297 VLILTTGSQGEPLAAMTRIANGEHPLVKTRPGDTIIFSANPIPGNTIAVVNCIDKLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--A 411 VI + +HVSGH D K M +P+ V +HGE LV H + A + G Sbjct: 357 ANVIYGR-DKGIHVSGHGCQEDQKMMLALTKPKFFVPVHGEHRMLVQHAQTAQKMGFTKE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 ++NG ++ L + I+++ +V GL L D I + + +R+QL+ G ++V Sbjct: 416 NTVIIKNGDVIELSTERIQVVAQVPAGLELVDQAGI--VHEQVMEERQQLANDGVVTVAA 473 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-----LPQFRRKDLKLL 526 ++ + P++ G+ D +H+L+ +++ + + Q + L Sbjct: 474 TVNQQGKLVTQPQLNLRGVVTVV-DSALLHQLINRSIEQILSERWGEFKTQSGIPNWTGL 532 Query: 527 RESISSALRSLLKKVWGKKPLVT 549 R+ I S L+ L+K+ +PLV Sbjct: 533 RQEIESYLQRLIKRELKSQPLVV 555 >gi|118472017|ref|YP_887020.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118173304|gb|ABK74200.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 558 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 169/554 (30%), Positives = 282/554 (50%), Gaps = 17/554 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ EIG NM ++ + + +++DCGV FP D PGVDL+ PD+ I Sbjct: 17 RVTALGGISEIGRNMTVFEHL----GRLLIVDCGVLFPGHDEPGVDLILPDLRHIEDRLD 72 Query: 67 NLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +THAHEDH GA+ L +PV S F I L+ K R+ K + Sbjct: 73 EIEALVVTHAHEDHIGAIPFLLKLRPDIPVVGSKFTIALVREKCREHRLKPK--FVEVAE 130 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G F E VNHSIP +A+ I + G ++HTGD KLD + G TD + Sbjct: 131 RQSSQHGVFECEYFAVNHSIPGCLAVAIHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMSR 190 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G+ G+ +CDSTN+ G SE + ++ +++ A+G V+V F+S+V R++ IID Sbjct: 191 LGDAGVDLFLCDSTNSEHPGVSPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQIID 250 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIATGSQGE 304 A +GR++ +G S+ R + +A ++G +K D + + + P +++++I TG+QGE Sbjct: 251 AAVALGRRVSFVGRSMVRNMGIARELGYLKVDDSDILDIAAAEMMPPDRVVLITTGTQGE 310 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL+++SRGE R++ L D +I SS IPGNE A+ + + L + G RV+ + Sbjct: 311 PMAALSRMSRGEHRSITLTSGDLIILSSSLIPGNEEAVYGVIDSLSKIGARVVTNA-QAR 369 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 VHVSGH Y +L +Y +RP+ ++ +HG HL A+ LA G+ + NG + Sbjct: 370 VHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRHLRANAALAASTGVPPENIVLAENGVSV 429 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFG 481 L I V G DG + G D + +R LS G +S+ V++ G Sbjct: 430 DLVAGRASISGAVTVGKMFVDGLITGDVGDATLGERLILS-SGFVSITVVVHRGTGRPAG 488 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++ G + K + + + V + L D + +++ + + + Sbjct: 489 PAHLISRGFS----EDPKALEPVAQKVERELEALAADNVTDPTRIAQAVRRTVGKWVGET 544 Query: 542 WGKKPLVTVFINKI 555 + ++P++ + +I Sbjct: 545 YRRQPMIVPTVIEI 558 >gi|28378742|ref|NP_785634.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|254556945|ref|YP_003063362.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|300768260|ref|ZP_07078165.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180934|ref|YP_003925062.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271579|emb|CAD64484.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|254045872|gb|ACT62665.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|300494324|gb|EFK29487.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046425|gb|ADN98968.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 574 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 266/561 (47%), Gaps = 12/561 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + E+ P GGV E G NM ++DCG+ +P+++L G+D+V PD +++ Sbjct: 2 SSEIQITPFGGVRENGKNMYAVE----VDGDIYILDCGLKYPENELLGIDIVIPDFSYLR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CI 121 + ++ +F+TH H D GAL + +VPV+ S I L + + + +K Sbjct: 58 ENADRIVGVFLTHGHADAIGALPYFLNEFNVPVFGSELTIELAKIQLQKDPKAKNFNDFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D G ++ R HSIP++M +V+++ G +V+TGD+K D A TD Sbjct: 118 IINEKTEIDFGTVTVSFFRTTHSIPDSMGIVLQTSAGEVVYTGDFKFDPTAAGDYQTDFA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+LAL+ DS NA +SE+ I + + K G ++V + +S++ RI+ Sbjct: 178 RLAEIGSKGVLALLSDSANAENYEQPVSEREIAAYVLETFKYHPGRIIVASVASNILRIQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A + RK+ L+ ++ +V AID+G + + + + ++ EQ++++ TG Sbjct: 238 QVLDAAAKSNRKVALMPGDVESIVKTAIDLGKLHMPEDVVVPLKAIDKLKPEQIVILQTG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ + V + + D V ++ E + ++ + V A Sbjct: 298 RMGEPIKALQRMANKQESKVNIEKGDLVFITTTPSHSMETVVAKTRDMIYRADADVKAIA 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 E ++ SGH DL+ M ++PQ + I GE L AH + A + GI V Sbjct: 358 DE--MNSSGHAAKRDLQMMINMMKPQYFIPIQGEYRLLDAHADFAREVGIPDDHVLIAAK 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G LR D + + + G + DG +G ++ + R+ LS G V +D Sbjct: 416 GDQLRYDGDTMHLAGSIEVGDTMIDGIGVGDIGNIVLRDRKILSEDGIFVAVVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V TTV + + D L++++ L Sbjct: 476 KIIATPKITSRGF-VYVKTSKDLMQESAELVKTTVQENLDNKEFDWGHLKQAVREKLNHY 534 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 L + P++ I ++++ Sbjct: 535 LWDQTKRHPVILPVIMEVNQH 555 >gi|78211624|ref|YP_380403.1| hypothetical protein Syncc9605_0069 [Synechococcus sp. CC9605] gi|78196083|gb|ABB33848.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 679 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 15 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P +Y A+ +L K V + + Sbjct: 71 KRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVRDRTTLQTVA 130 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D L Sbjct: 131 PRDVVKVGQHFSVEFIRNTHSMADSFSLAISTPVGTVIFTGDFKFDHTPVDGENFDMARL 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G++G+L L DSTN+ G C E+ + N+ + NA+G V+VTTF+SS+ R+ I Sbjct: 191 AHHGDKGVLCLFSDSTNSEVPGFCPPERSVFPNLDRHIANAEGRVIVTTFASSIHRVSMI 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 251 LELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLMTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE VK+ DT+IFS+ IPGN +++ + ++L+ G +V+ E Sbjct: 311 GEPLAALSRISRGEHPQVKVKTTDTIIFSASPIPGNTISVVNTIDKLMMLGAKVVYGKGE 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVRNGK 420 +HVSGH + D K M RP+ V +HGE LV H + + NG Sbjct: 371 G-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVQHSRTGHAMGVPVDNTLIIDNGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L PD I + V G+ L D G + +R+QL+ G +++ + + Sbjct: 430 VVELTPDSIRKGNAVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILAAISTDGAMV 489 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + + + D ++ + Sbjct: 490 APPRVNLRGVVTT-ADARKMSLWVEREIKWVLENRWKQLCRNTGGKAPEVDWMGVQREVE 548 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 549 VGLGRRMRRELQVEPLILCLV 569 >gi|320527455|ref|ZP_08028636.1| hypothetical protein HMPREF9430_00746 [Solobacterium moorei F0204] gi|320132168|gb|EFW24717.1| hypothetical protein HMPREF9430_00746 [Solobacterium moorei F0204] Length = 617 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 174/552 (31%), Positives = 269/552 (48%), Gaps = 13/552 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 LGG+GE+G NM + + I++DCGV FP+D L GVD V PD ++++K + Sbjct: 43 VYALGGLGEVGKNMYCVEH----DDEIIIVDCGVLFPEDALLGVDYVIPDYSYLVKNQNK 98 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + A+ ITH HEDH G + + + +YA FA L+E K R+++ + Sbjct: 99 IAAMVITHGHEDHIGGIPFFLKTIRLKQIYAPRFAKALIEKKLEEHRLTRVCKITEINSE 158 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + FSI V HSIP+ + ++I +P G IV TGD+K D + D + I Sbjct: 159 SSIKTKYFSIGFFNVVHSIPDALGVLINTPNGRIVETGDFKFDMTPVGT-NADFQKMAYI 217 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G G+ LM DSTN+ G+ ISEK + + I + M+ G ++V+TF+S+V R+ I++ Sbjct: 218 GQVGVSLLMSDSTNSSVPGSSISEKTVARAIMEQMRKTPGRMIVSTFASNVLRLNQILEA 277 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A RK+ + G S++ V + +G+I+ D F+S P ++ ++ TGSQGEP Sbjct: 278 AVACNRKVAVFGRSMENVCEIGKKMGVIQIPDSSFISGNELNTLPSNRICIVCTGSQGEP 337 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ G R +K+ DTV+FSS IPGN ++G + N+L G VI Sbjct: 338 MAALSRIANGTHRFIKIIPGDTVLFSSNPIPGNGTSVGSVINQLTRVGANVITNSPLTSF 397 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H +GH + K M I+P + HGE L H A + GI NG ++ Sbjct: 398 HTTGHAPQEEQKLMLNLIKPVWFMPNHGEYKMLKQHSATAQETGIPEDHCLICSNGDVVV 457 Query: 424 LFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L I +E V DG I + I R+ L+ G ++V V +D+ Y I Sbjct: 458 LRDGKCFIANERVQTDDIYVDGNDISGLSTSVIKDRKILAENGLVAVIVTIDSRYNKILC 517 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P IV G Y D + K V ++ +R L+ I S L L + Sbjct: 518 RPSIVSRGF-VYIKDSQTLLKEAELLVYDSLKK-KMQQRTTFGELKNCIRSCLEPFLFQK 575 Query: 542 WGKKPLVTVFIN 553 + P+V I Sbjct: 576 TNRNPIVIPVIL 587 >gi|257871081|ref|ZP_05650734.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257805245|gb|EEV34067.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 560 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + +PLGGV E G NM + G ++DCGV +P+++L G+D V PD T++ + Sbjct: 2 ETIKIIPLGGVRENGKNMYIAEVG----EDIFVLDCGVRYPENELLGIDTVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 + +F+TH H D GAL + VPV+ + I L + +KK Sbjct: 58 NADRVAGVFLTHGHADAIGALPYFLENVPVPVFGTELTIELAKLTVAKNEATKKFKDFHI 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G +I R HSIP+++ + +++ GNIV+TGD+K D AI TD Sbjct: 118 IDEHSEIDFGHATISFFRTTHSIPDSVGISVKTSAGNIVYTGDFKFDQTAIPMYQTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ STNA SE I+ ++D ++ +G ++V + +S++ R++ Sbjct: 178 LAEIGKEGVLALLSTSTNAENPAPIASELTIQDEVFDNIRYWEGRIIVASVASNLQRVQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATG 300 ++D A + GRK+VL G R++ A+ +G +K L ++ + Y EQL+++ TG Sbjct: 238 VLDAAYRSGRKVVLTGQDFGRIIRTAMKLGKLKLPAEDLLITQKEMKKYANEQLLILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ G R +++ E D V ++ E + ++ + G V Sbjct: 298 RMGEPIKALQKMANGTHRTLRIQEGDLVYITTTPTTAMETVVAKTEDIIYRAGGTVKQIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 VSGH PNDL+ M ++P + I GE L AH +LA + GI + Sbjct: 358 DNFR--VSGHANPNDLQLMLNLMKPTYFLPIQGEYRQLAAHVDLAHEVGIPLKNIFITAR 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + V + DG +G ++ + R+ LS G V ++ Sbjct: 416 GDVLEYKKGEMHSAGAVPAENVMIDGIGVGDIGNIVLRDRKVLSEDGIFVAVVTINRREK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V V + L++ I L Sbjct: 476 KIIAAPQITSRGF-VYVKASRDLIRESGEIVAEIVEKHLHDEEFEWSKLKQDIRDRLSRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + S++ Sbjct: 535 LFEQTKRRPVILPVIMESSQR 555 >gi|253798166|ref|YP_003031167.1| hypothetical protein TBMG_01223 [Mycobacterium tuberculosis KZN 1435] gi|289553463|ref|ZP_06442673.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|297635361|ref|ZP_06953141.1| hypothetical protein MtubK4_14627 [Mycobacterium tuberculosis KZN 4207] gi|297732358|ref|ZP_06961476.1| hypothetical protein MtubKR_14777 [Mycobacterium tuberculosis KZN R506] gi|313659691|ref|ZP_07816571.1| hypothetical protein MtubKV_14782 [Mycobacterium tuberculosis KZN V2475] gi|253319669|gb|ACT24272.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289438095|gb|EFD20588.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|328457939|gb|AEB03362.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 558 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 280/555 (50%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ K R++ + + + Sbjct: 72 DDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRIT--LVFVEVR 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G G F E VNHS P+ +A+ + + G I+HTGD K D G TD + Sbjct: 130 EGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ L+CDSTNA G SE + ++ +++ A G V+V F+S+V R++ II Sbjct: 190 RLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + VA +G ++ D + + +Q+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D ++ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILS-SGFVAVTVVVRRGTGQPL 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 AAPHLHSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|120403379|ref|YP_953208.1| beta-lactamase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119956197|gb|ABM13202.1| beta-lactamase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 558 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 284/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + +++DCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIVDCGVLFPTHDEPGVDLILPDLRHLENRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +P+ S F + L+ K R+S K+ + Sbjct: 72 DDIEALVVTHGHEDHIGAIPFLLKQRADIPIVGSKFTLALVAEKCREHRLSPKL--VEVA 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G K G F + VNHSIP +A+ I + G ++HTGD KLD G TD + Sbjct: 130 EGQKSTHGVFECQYFAVNHSIPGCLAIGIHTGAGTVLHTGDIKLDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTN+ G SE + +++ +M+ A G V+V F+S+V R++SII Sbjct: 190 RLGDAGVDLFLCDSTNSEIPGVGPSESEVGPSLHRLMRGADGRVIVACFASNVDRVQSII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A +G +K D+ L + + P +++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARQLGYLKVADEDVLDIAAAEMMPADRVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL+++SRGE R++ L D +I SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVMDSLAKIGARVVTNQ-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG + A+ LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMMRANAALAASTGVPEENIVLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D + +R LS G ++V V++ Sbjct: 429 VDLVAGRAGIAGAVPVGKMFVDGQITGDVGDATLGERLILS-SGFIAVTVIVRRGTGKPA 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + G + K + + + V + L D + +++ + + + Sbjct: 488 APAHLHSRGFS----EDPKALEPVARKVGAELDQLASQNVTDPARIAQAVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + +I Sbjct: 544 TYRRQPMIVPTVIEI 558 >gi|86156524|ref|YP_463309.1| beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773035|gb|ABC79872.1| Beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 550 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIGMN + ++DCGV FP ++ GVDL+ PD++++ + R Sbjct: 5 VRIVPLGGLGEIGMNCMAVE----CDGRIAVVDCGVLFP-NENLGVDLIAPDLSWLRERR 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + A+F+TH HEDH GAL L + VPVY + F + LL + V + + + Sbjct: 60 EQVGAVFLTHGHEDHLGALPFLLREIPVPVYGTRFTLALLRPRLEEAGVRADLREV--RP 117 Query: 126 GDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 GD G + E + V HSIP+ L + +P G ++H+GD+K+D + G D D Sbjct: 118 GDVRPAGEASPIAAEFLAVTHSIPDACGLALSTPQGTLLHSGDFKIDPAPVRGPGMDLDR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G +G+ L+ DSTNA REGT +SE + + + A+G V V F+S+V R++ Sbjct: 178 IEALGRKGVRLLLSDSTNAEREGTSLSESEVGPALEQAFERARGRVFVACFASNVHRLQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 I+D A GR++ LG S++ +A ++G ++ +S E P +L V+ TG+ Sbjct: 238 IVDAARAFGRRVAFLGRSMEANARLAQELGYLELPAWMPVSPEEARTLPPRELCVLTTGT 297 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSALA+L+RGE ++ +A D V+ SSR IPGNE+AIG + N L +G V E Sbjct: 298 QGEPRSALARLARGEHPDLAVAPGDLVVLSSRFIPGNEIAIGQVVNELCRRGAEVAYEGL 357 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+HVSGH ++ +R+ + RP V IHGE HL H A EG+A + +G++ Sbjct: 358 -APLHVSGHAQADEQRRLIRLARPAHFVPIHGEYRHLSRHAAHAAAEGVAGRDVLVDGQV 416 Query: 422 LRLFPDPIEIID-EVVHGLFLKDGFLIG--KFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 L L + +++ V G D + L + RR L+ G + ++ Sbjct: 417 LELADAGVRVLEAPVATGRVYTDRDALLGADMGALVVRDRRLLAETGLCIAVLAIERTTG 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE+ G+ ++G ++ V+ + +L R D ++E++ A+R Sbjct: 477 AVVRGPELFARGVAGFEGAEEELRGE----VLAALAELSPQARTDPAEVQEAVRLAVRRF 532 Query: 538 LKKVWGKKPLVTVFINKI 555 ++ GKKP V + ++ Sbjct: 533 FRRTTGKKPPVLPVVLEL 550 >gi|78778283|ref|YP_394598.1| hypothetical protein Suden_2089 [Sulfurimonas denitrificans DSM 1251] gi|78498823|gb|ABB45363.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 647 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 162/557 (29%), Positives = 287/557 (51%), Gaps = 14/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E++ PLGG+GEIG N+ ++ + + I++D G+SFP +D+ GVD++ PD T+I Sbjct: 96 SKEKIRITPLGGLGEIGGNITVFE----TQNEAILVDVGMSFPDEDMHGVDILVPDFTYI 151 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + A+ ITHAHEDH GA+ L+ + P++ SP + ++ K + + K Sbjct: 152 REIKDKIKAVIITHAHEDHIGAMPYLYKEMQFPIFGSPLPLAMIAGKFDEHHIKEFKQFF 211 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +G F IE + + HSI ++ +L I + G ++HTGD+K+D + G D Sbjct: 212 NPIEKRKTYKIGNDFEIEWMHMTHSIIDSSSLAITTSAGTVIHTGDFKIDHTPVDGYTAD 271 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G++G+L L+ DSTN+ SE + + + A+G V+++TFSS++ R Sbjct: 272 LHRLAYYGDKGVLCLLSDSTNSYNTAPTPSELSVAPALDRVFSKAEGRVILSTFSSNIHR 331 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I + GRK+ ++G S++R + VA+ IK +F+ E ++++++ Sbjct: 332 VYQAIQYGVKYGRKVCVIGRSMERNIEVAMQYDYIKLPKNIFVEPEQIASMNDKEILIVT 391 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL ++S GE R+VK+ D ++ SSRAIPGNE +I + N L G +V Sbjct: 392 TGSQGEPSSALFRMSIGEHRHVKIKPTDLIVLSSRAIPGNEGSISGMLNHLQRAGAKVA- 450 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M + + P+ + IHGE H++ HKE + G+ + + Sbjct: 451 --NDRDIHVSGHASIEEQKLMLRLVNPKFFLPIHGEYNHVMKHKETGMMCGVPERNIYIM 508 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G + + P + + V G D K D + R++L+ G + + +D Sbjct: 509 NDGDTVEIAPKYMRKVKTVRTGKTYIDNQNNHKIDDDIVIDRQKLASDGIVMIVAQIDGQ 568 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 H + P + G+ A D K + + + ++ + ++ + L + +R Sbjct: 569 HSTMLSKPLVTSFGLVADKQDKA-FAKEIEDVLELFLANIKEGLLENARALENDLRQVVR 627 Query: 536 SLLKKVWGKKPLVTVFI 552 + + K PL+ I Sbjct: 628 KHIYRKMKKYPLIVPHI 644 >gi|300866440|ref|ZP_07111132.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335544|emb|CBN56292.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 620 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 171/566 (30%), Positives = 302/566 (53%), Gaps = 20/566 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ Sbjct: 26 SEPTLKIIPLGGLHEIGKNTCVFEY----EDEIILLDAGLAFPSDGMHGVNIVLPDMTYL 81 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ + + +TH HEDH G + +P +Y A+ LL K VS + Sbjct: 82 RENKEKIKGMIVTHGHEDHIGGIPYHLKQFEIPVIYGPRLAMALLSGKLEEAGVSNRTEL 141 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + D V +G F +E +R HS+ ++ + I +PVG ++HTGD+K+D + G+ D Sbjct: 142 RTVRPRDIVRIGKHFLVEYIRNTHSMADSFTVAIHTPVGVLIHTGDFKIDHTPVDGEFFD 201 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTN+ G SE+ + N+ + A G +LVTTF+SSV R Sbjct: 202 FQKLAEYGEKGVLCLISDSTNSEIPGFTPSERSVYPNLDRVFAQAPGRILVTTFASSVHR 261 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++++A++ R + ++G S+ V++ A ++G IK +D +F ++ P E+LI++ Sbjct: 262 LQIVLELAKKHNRYVAVVGRSMLNVIAHARNLGYIKCEDSIFQPLKAVRNMPDEKLIILT 321 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SA+ ++S E + +++ + DTV+FS+ IPGN +A+ + +RL+ G VI Sbjct: 322 TGSQGEPMSAMTRISNCEHQEIRIKKGDTVVFSANPIPGNTIAVVNTIDRLMMLGANVIY 381 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M +P+ + +HGE L+ H + A GI + + Sbjct: 382 GR-DKGIHVSGHGCQEDQKLMIAMTKPKFFLPVHGEHRMLIQHSKTAQSMGIPAENMVII 440 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L + I + +V G+ L DG G + + +R+QL+ G ++V L Sbjct: 441 DNGDVVELNQNSISVGGKVASGIELVDGSRAGVVKENVLKERQQLAEDGIVTVAAALGWE 500 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD--------LPQFRRKDLKLLRE 528 + PEI G+ + + +L+ +T+ T + D + D ++ Sbjct: 501 GKLIVKPEIHLKGVVTNV-ERSLLQRLITQTIETVLSDRWSEFAKPVGSKVEVDWVGVQT 559 Query: 529 SISSALRSLLKKVWGKKPLVTVFINK 554 + A+ LL++ PL VF+ + Sbjct: 560 QLERAIHRLLRREIQSNPL-LVFLMQ 584 >gi|37520588|ref|NP_923965.1| hypothetical protein glr1019 [Gloeobacter violaceus PCC 7421] gi|35211582|dbj|BAC88960.1| glr1019 [Gloeobacter violaceus PCC 7421] Length = 587 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 164/563 (29%), Positives = 292/563 (51%), Gaps = 22/563 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG N ++ + + +++D G+SFP +++ GV+LV P+I ++++ + Sbjct: 12 LRITPLGGLGEIGKNTWIF----QVNDEIMLLDGGLSFPTEEMHGVNLVLPNIDWLIENQ 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + ++ + +TH HEDH G + L +P ++ A+ LLE K + + + Sbjct: 68 EKIVGMVVTHGHEDHIGGIPYHLQRLRIPVIHGPRLAMALLEDKLREAELLGRTQLQTVG 127 Query: 125 AGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V VG F +E ++ HS+ ++ L I +PVG ++HTGD+K D + G D L Sbjct: 128 PRGTVRVGKYFLVEYLQNTHSMADSYTLAIHTPVGVVMHTGDFKFDHTPVDGRKFDYQRL 187 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTNA G SE+ + N+ +K A G V+VTTF+SSV RI + Sbjct: 188 AEYGEKGVLCLISDSTNAEVPGFTPSERSVYPNLERYIKEAPGRVIVTTFASSVHRIHML 247 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--SDESFGLYPREQLIVIATGS 301 +DIA++ GR + ++G S+ +++ A +G I L ++ P E+++V+ TGS Sbjct: 248 LDIAQKTGRSVCVVGRSMLNMIAKAKALGFIPNFSDSLLQPVQAANSLPAERVLVLTTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP SAL +++ G+ R VK+ DTVIFSS IPGN +++ + ++L++ G V+ Sbjct: 308 QGEPMSALTRIAGGDHRQVKIQPGDTVIFSSNPIPGNTISVVRVIDKLMQLGANVVYGR- 366 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RNG 419 E +HVSGH D K M +P+ HGE + H + A + G+ + NG Sbjct: 367 ERGIHVSGHGAIEDQKLMLALTKPKFFFPCHGEYRMIRRHAQTAQEMGVPAANMLLTENG 426 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L P+ + ++D + G+ L D + +R++L+ G ++V + L Sbjct: 427 DVVELTPESMRVVDRIPAGVDLVDASRSTMVNSNVLRERQRLAEDGFVTVAIALTPQGTF 486 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR----------RKDLKLLRES 529 P+I + A + + +L + T +FR + D +++ Sbjct: 487 AARPQISIKAV-ARSAETRNLEDMLRTALERTQGRFGEFRQPLEAGALGYQYDWMGIKQL 545 Query: 530 ISSALRSLLKKVWGKKPLVTVFI 552 + ++ + +++ PL+ V + Sbjct: 546 LERTVKQVTREMLQSHPLIQVLL 568 >gi|224540921|ref|ZP_03681460.1| hypothetical protein CATMIT_00072 [Catenibacterium mitsuokai DSM 15897] gi|224526154|gb|EEF95259.1| hypothetical protein CATMIT_00072 [Catenibacterium mitsuokai DSM 15897] Length = 581 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 160/557 (28%), Positives = 266/557 (47%), Gaps = 12/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + LGG+ E+G N + + I+ID GV F + LPG+D V PD T++ Sbjct: 29 KTQGTKIFALGGLNEVGKNTYCIE----CNDEMIIIDAGVKFASEGLPGIDYVIPDYTYL 84 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 K K + +FITH HEDH G + L +++P +YASP A ++ K ++ Sbjct: 85 RKNNKKIKGLFITHGHEDHIGGIPFLLRLVNIPFIYASPLACAMIRRKLEEHHLTHVTKM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + F+I NHSIPE+M +++ +P G I+ TGD+K D + D Sbjct: 145 IPITHESSIKTKYFNIGFFNTNHSIPESMGIIVNTPDGRIIETGDFKFDLSPVAN-PADY 203 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G G+ LM DSTNA ISEK + + + + +G ++V TF+S++ R+ Sbjct: 204 QIMSFLGETGVDLLMSDSTNAEVPTFSISEKTVASQVQEEFRKTEGRIIVATFASNIHRV 263 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I++ A + RKI++ G S+ + VA +G IK D+ F+ ++ P +++++ T Sbjct: 264 QQIVEAAVKFNRKILVYGRSMVNNIDVARKMGYIKCPDRFFIKNDEARHLPDNEILILCT 323 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL +++ G R +K+ DTV+FSS IPGN+ ++ + N+L G RV+ Sbjct: 324 GSQGEALAALNRIANGTHRQIKIKPGDTVLFSSNPIPGNQSSVSRLINKLYRSGARVLEN 383 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVR 417 +H SGH + K M +P+ IHGE L HK+L + + Sbjct: 384 SMISNLHTSGHASQEEQKLMMLLTKPKYFFPIHGEHKMLCIHKKLYEEVGGQADHAFVLS 443 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG L L + V DG + + + R+ LS G ++V + +D+H Sbjct: 444 NGDCLCLKDHEVFQTRGVHADDIYVDGNDLTGLSTAVLHDRQILSEDGMVAVLISMDSHA 503 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P I+ G Y D + V + L Q + ++ +I L + Sbjct: 504 GILLHKPVIMSRGF-VYMKDSKPMIYGAEMAVDRKLRALLQEKTT-FGEIKNTIRETLTT 561 Query: 537 LLKKVWGKKPLVTVFIN 553 ++P++ I Sbjct: 562 YFYTKTKRRPMIIPVIM 578 >gi|116074354|ref|ZP_01471616.1| hypothetical protein RS9916_37927 [Synechococcus sp. RS9916] gi|116069659|gb|EAU75411.1| hypothetical protein RS9916_37927 [Synechococcus sp. RS9916] Length = 690 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 167/561 (29%), Positives = 290/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 22 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 77 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P +Y A+ +L K V+ + + Sbjct: 78 KRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVTDRTTLQTVS 137 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D L Sbjct: 138 PRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGEHFDLARL 197 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G++G+L L DSTNA G C E+ + N+ M A+G V++TTF+SS+ R+ I Sbjct: 198 AHHGDQGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHMAEAEGRVIITTFASSIHRVAMI 257 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 258 LELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDLPDRETLLLMTGSQ 317 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE VK+ DT+IFS+ IPGN +++ + +RL+ G +V+ E Sbjct: 318 GEPLAALSRISRGEHPQVKVKTTDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVYGKGE 377 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + G+ + NG Sbjct: 378 G-IHVSGHGFQEDQKLMLALTKPKFFVPVHGEHRMLVQHAKTGHSMGVPEDNTLIIDNGD 436 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L D I D V G+ L D G + +R+QL+ G +++ + + Sbjct: 437 VVELTADAIRKGDAVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILAAISTDGAMV 496 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + + D ++ + Sbjct: 497 APPRVNLRGVVTT-ADARKMSLWTEREIKWVLENRWKQLTRNTGGKAPEVDWMGVQREVE 555 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 556 VGLGRRMRRELQVEPLILCLV 576 >gi|17231170|ref|NP_487718.1| hypothetical protein all3678 [Nostoc sp. PCC 7120] gi|17132811|dbj|BAB75377.1| all3678 [Nostoc sp. PCC 7120] Length = 589 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 162/569 (28%), Positives = 293/569 (51%), Gaps = 20/569 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ EIG N ++ Y + I++D G++FP + + GV++V PD+T++ Sbjct: 7 NAGLKIIPLGGLHEIGKNTCVFEY----DDEIILLDAGLAFPTEAMHGVNIVLPDMTYLR 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + + +TH HEDH G + +P +Y A+ +LE K V + Sbjct: 63 ENRHKIKGMVVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTELR 122 Query: 122 SFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D V +G F +E +R HSI ++ L I +P+G ++HTGD+K D + G+ D Sbjct: 123 KVLPRDVVRIGKSFFVEYIRNTHSIADSFTLAIHTPLGVVIHTGDFKFDHTPVDGEKFDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L L+ DSTN+ G SE + N+ + A+G + VTTF+SSV RI Sbjct: 183 QRLAEHGEKGVLCLLSDSTNSEVPGFTPSEASVFPNLDRVFSQAEGRLFVTTFASSVHRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIAT 299 I+ +A++ R + ++G S+ +++ A ++G IK + L P + ++V+ T Sbjct: 243 NMILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLLQPLHMVRNLPDDNVLVLTT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +A+ +++ E ++K+ + DTV+FS+ IPGN +A+ + ++L++QG +V+ Sbjct: 303 GSQGETMAAMTRIANKEHPHIKIRQGDTVVFSANPIPGNTIAVVNTIDKLMQQGAKVVYG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + +HVSGH D K M RP+ V +HGE LV H + A + GI + ++ Sbjct: 363 R-DQGIHVSGHGCQEDQKLMISLTRPKFFVPVHGEHRMLVKHSQTAQKTGIPAENMVIIQ 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L D I + +V G+ L D G + + +R++++ G +++ +D Sbjct: 422 NGDIIELTEDSIRVAGKVQSGIELVDTTSSGMVSAKVLQERQRMAEEGLVTIAAAIDWQG 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTV--------VDLPQFRRKDLKLLRES 529 + PEI G+ + + K + + + + + D L+ + Sbjct: 482 KLLAKPEIHLRGVVTSV-ERSLLQKWVQQRIEEILGVRWSEFTTSEGEQPEIDWGGLQGT 540 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKISRQ 558 + L+ +++ +P VT + +I + Sbjct: 541 LERELQRSIRRELQCQPSVT-LLMQIPDE 568 >gi|319407252|emb|CBI80891.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 558 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 255/553 (46%), Positives = 388/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ELVFLPLGGVGEIGMN+A YG+G R+W+++D GVSF +LPGVDL+ PDI F+ Sbjct: 5 NKNELVFLPLGGVGEIGMNLAAYGFGPKDCREWLLVDMGVSFAGPELPGVDLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L +P+Y + F GLLE+KR + +IP Sbjct: 65 ENEKHNVCGLILTHAHEDHYGAVLDLWPKLKIPIYCTCFTAGLLESKRQLDFEFHEIPVN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQ+GD +G FSIE++ VNHSIPE ++L I + +GN++HTGDWK+D LG +TD++ Sbjct: 125 IFQSGDCFQIGPFSIEAISVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPITDEE 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+GN+G+LAL+CDSTNA+++G SE+ ++K+I +I+ A+G + +TTF+S++ RIR Sbjct: 185 RFRALGNKGVLALLCDSTNALQDGISPSEQQVQKSISEIILKARGRIAITTFASNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI AE +GR+++L+G SLKR V VA ++G + F+++E + P + ++++ TGS Sbjct: 245 SIALAAESVGRQVLLVGRSLKRSVMVAQELGYMDDIAPFITEEDYSHIPPQNIVLVVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+ALA++SR EM+N+ L+ DT+I+SSR IPGNE AI I+NR ++QG+ +I Sbjct: 305 QGESRAALAKISRNEMKNIVLSPGDTIIYSSRNIPGNEKAIIDIQNRFIDQGINIITNR- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L +MY W +PQ+L+ +HGE +HL A + LA Q GI V +RNG + Sbjct: 364 DALVHVSGHPRRSELLQMYDWTKPQILIPVHGEAVHLTAQETLAQQVGIKTVARIRNGDI 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 RL P+P+EIID+V G KDGFL+G +LGI +R +LS+ GH+SV++ +++ +++ Sbjct: 424 FRLAPEPVEIIDQVPVGRIYKDGFLLGNEDELGIRERCKLSYAGHVSVSLHMNSKHDLID 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++ G+P D G + +L + V ++P+ +RKD +L+RE+ A+R+ + K+ Sbjct: 484 DIGLIIFGLPKSDRAGALLEDILFNVIENAVNNIPRAKRKDNELIREAARRAVRAAVNKI 543 Query: 542 WGKKPLVTVFINK 554 WGKKP+ VF+++ Sbjct: 544 WGKKPICVVFLHR 556 >gi|310816697|ref|YP_003964661.1| metallo-beta-lactamase family protein [Ketogulonicigenium vulgare Y25] gi|308755432|gb|ADO43361.1| metallo-beta-lactamase family protein [Ketogulonicigenium vulgare Y25] Length = 557 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 194/558 (34%), Positives = 303/558 (54%), Gaps = 5/558 (0%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 M E L++LPLGG GEIGMN +YGYG P + I++D GV+FP D PGVDL+F D+ Sbjct: 1 MSQERLIYLPLGGAGEIGMNAYVYGYGKPGEERLIVVDLGVAFPDMDTTPGVDLIFADVA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ R + I ITHAHEDH GA+ LW L P+YA F + K K Sbjct: 61 WLEARRDRIEGIIITHAHEDHIGAIGHLWPRLRAPIYARKFTGLIAAGKLEDTGAPIKSV 120 Query: 119 -PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + +G FS+ + ++HSIPE+ L+I +P G I+HTGD+K+D + ++G+ Sbjct: 121 LNIVEPWPAQTITMGPFSVGFLPISHSIPESAGLIIDTPKGRILHTGDFKIDVNPVVGEA 180 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D+ G+ ALMCDSTN SE + I +++ +A G V+ TTF+S+V Sbjct: 181 FDEALWSRAAEGGVKALMCDSTNIFSPHAGRSESTLSTEIENLIASADGMVVATTFASNV 240 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 +R+++I + A GR+I LLG +++R+V A++ GI+ +S E PR +L+++ Sbjct: 241 ARLKTIANAATAAGRRICLLGRAMRRMVEAALETGILTDFPAVISPEEAADMPRHKLLLL 300 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGE R+A AQL+ G +KL E D +FSS+ IPGNE + I N L E+GV ++ Sbjct: 301 VTGSQGERRAASAQLANGSYLGLKLKEGDLFLFSSKTIPGNERGVIRIMNMLSEKGVDIV 360 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 + HVSGH DL+RM++ + P+++V +HGE HL H +LA + I Sbjct: 361 DDAG-GRYHVSGHANRPDLQRMHRIVNPKLVVPMHGEHRHLREHVKLAEESNIPG-FLAV 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ML L D ++ + + G DG + D + R +++ GH++V +++D H Sbjct: 419 NGMMLDLTGDRPQVAEYIDTGRTYLDGSVQIGAMDGVVRDRIRMALNGHVTVTLIIDEHD 478 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 G P +G+ + + + + + L D L + + + R+ Sbjct: 479 EPLGDPWCETMGLAELGRGNVPVVEAIEAELAKLLRRLDDKTLLDDDKLEKELRKSTRNA 538 Query: 538 LKKVWGKKPLVTVFINKI 555 + G KP VTV I+++ Sbjct: 539 VNAEIGHKPEVTVIISRL 556 >gi|239636246|ref|ZP_04677248.1| ribonuclease J 2 [Staphylococcus warneri L37603] gi|239597601|gb|EEQ80096.1| ribonuclease J 2 [Staphylococcus warneri L37603] Length = 557 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 160/558 (28%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ ++KK+ Sbjct: 63 IENKEKLKGIFLTHGHEHAMGAVSYILEQVDAPVYGSKLTIALVKENMTSRNINKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +I HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 SVNHESVMRFKNVNISFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLNGQYSPDFK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFALISDSTEAEKPGYNTPENVIEHHMYDAFAKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPISEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + + D+V + A EV I N LV G +I Sbjct: 303 MQGEPVEALSQMAQQKHKIMNIEKGDSVFLAITASANMEVIISDTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFVPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVINYDGKNMVLNEKVHSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + K + V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEDLLKEAEEKVREIVEAGLQEKRIEWSEIKQNMRDKISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|88809956|ref|ZP_01125461.1| hypothetical protein WH7805_09087 [Synechococcus sp. WH 7805] gi|88786146|gb|EAR17308.1| hypothetical protein WH7805_09087 [Synechococcus sp. WH 7805] Length = 679 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 292/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ Sbjct: 9 KQPCLRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ + + +TH HEDH G + ++P +Y A+ +L K V+ + Sbjct: 65 RENQRRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVTDRTTL 124 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG I+ TGD+K D + G+ D Sbjct: 125 QTVGPRDVVKVGQHFSVEFIRNTHSMADSFSLAISTPVGTIIFTGDFKFDHTPVDGEHFD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G++G+L L DSTNA G C E+ + N+ + +A+G V+VTTF+SS+ R Sbjct: 185 LARLAHHGDQGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHIADAEGRVIVTTFASSIHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ Sbjct: 245 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLM 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRG+ VK+ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 305 TGSQGEPLAALSRISRGDHPQVKVKSSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 364 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M RP+ V +HGE LV H G+ + Sbjct: 365 GKGEG-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVRHARTGHSMGVPEDNTLII 423 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L PD + D V G+ L D G + +R+QL+ G +++ + Sbjct: 424 DNGDVVELTPDSLRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILAAISTD 483 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 484 GAMVAPPRVNLRGVVTT-ADARKMSLWTEREINWVLENRWKQLTRNTGGKAPEVDWMGVQ 542 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 543 REVEVGLSRRMRRELQVEPLILCLV 567 >gi|220915234|ref|YP_002490538.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953088|gb|ACL63472.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 546 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 295/558 (52%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIGMN + ++DCGV FP + GVDL+ PD++++ + R Sbjct: 1 MRIVPLGGLGEIGMNCMAVE----CDGRIAVVDCGVLFPNES-LGVDLIAPDLSWLRERR 55 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + A+F+TH HEDH GAL L + VPVY + F + LL + V + + + Sbjct: 56 EQVGAVFLTHGHEDHLGALPFLLREVPVPVYGTRFTLALLRPRLDEAGVRADLREV--RP 113 Query: 126 GDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 GD G + E V HSIP+ L + +P G ++H+GD+K+D + G D Sbjct: 114 GDVRPAGDASPIAAEFFSVTHSIPDACGLALSTPQGTLLHSGDFKIDPAPVRGPGMDLGR 173 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G +G+ L+ DSTNA REGT +SE + + + A+G V V F+S+V R++ Sbjct: 174 IEALGRKGVRLLLSDSTNAEREGTSLSESQVGPALEQAFELARGRVFVACFASNVHRLQQ 233 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 I+D A GR++ LG S++ +A ++G ++ +S E P +L V+ TG+ Sbjct: 234 IVDAARAFGRRVAFLGRSMEANARLAQELGYLELPGWMPVSPEEARTLPPRELCVLTTGT 293 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSALA+L+RGE ++ ++ D V+ SSR IPGNE+AIG + N L +G V E Sbjct: 294 QGEPRSALARLARGEHPDLAVSPGDLVVLSSRFIPGNEIAIGQVVNELCRRGAEVAYEGL 353 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+HVSGH ++ +R+ + RP V IHGE HL H A EG+A + +G++ Sbjct: 354 -APLHVSGHAQADEQRRLIRLARPAHFVPIHGEYRHLSRHAAHAAAEGVAGRDVLVDGQV 412 Query: 422 LRLFPDPIEIIDE-VVHGLFLKDGFLIG--KFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 L L + ++DE V G D + L + RR L+ G + ++ Sbjct: 413 LELADAGVRVLDEPVATGRVYTDRDALLGADIGALVVRDRRLLAETGLCIAVLAIERTTG 472 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE+ G+ ++G ++ ++ + DL R D ++E++ A+R Sbjct: 473 AVVRGPELFARGVAGFEGAEEELRAE----ILAGLGDLSPKARTDPAEVQEAVRLAVRRF 528 Query: 538 LKKVWGKKPLVTVFINKI 555 ++ GKKP V + ++ Sbjct: 529 FRRTTGKKPPVLPVVLEL 546 >gi|148555908|ref|YP_001263490.1| beta-lactamase domain-containing protein [Sphingomonas wittichii RW1] gi|148501098|gb|ABQ69352.1| beta-lactamase domain protein [Sphingomonas wittichii RW1] Length = 546 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 200/552 (36%), Positives = 310/552 (56%), Gaps = 11/552 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL+FL LGG GEIGMN+ LYG + KW+M+D G++F PGV+L+ PD+ FI + Sbjct: 6 NELLFLALGGSGEIGMNVNLYG----TQGKWVMVDLGLTFADPGYPGVELILPDLAFIEE 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L+ + +TH HEDH GA+ L + L VP+YA+ F L++ K E ++ K+ Sbjct: 62 RADDLLGVVLTHGHEDHIGAIPYLAADLGVPLYATRFTAELIKGKLDEEGLTGKVDLHVI 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +G F V + HSIPE AL+I +P G I HTGDWK+D+ +LG + + L Sbjct: 122 ENEGSFQLGPFGFTYVPLAHSIPEGNALLIDTPHGRIFHTGDWKIDEAPLLGQPSTAEEL 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG++G+LAL+CDSTN E SE ++K + + + K VLVTTF+S+ +R++++ Sbjct: 182 TAIGDQGVLALVCDSTNVFNEEASGSEADVRKGLDEAIGACKARVLVTTFASNAARLQTL 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A+ GRK+ + G SL R++ VA G ++ + + P ++++IATG QG Sbjct: 242 GEVAQDTGRKLCVAGRSLDRIIRVAKASGYLQHFPPVIDVDEAMRLPPREVMIIATGGQG 301 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+AL++++ +KL+ DTV+FSS+ IPGNE+AIG I+N L +GV +I + + Sbjct: 302 EARAALSRIAFDSHP-IKLSAGDTVVFSSKQIPGNEIAIGRIQNALAAKGVEMITDR-QA 359 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP +LK MY WIRP++++ +HGE H+ A G+ NG ++R Sbjct: 360 EVHVSGHPGRPELKAMYGWIRPEIILPVHGELRHMAEQARFAKSLGVPHGIVQSNGTLVR 419 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L PD + I G + DG +I + +RR+ G + V V++ + G P Sbjct: 420 LAPDGPKAIGHERTGRLVLDGDVILPADGSTMNERRRAGLYGFVGVTVVIGKDGRLKGEP 479 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+P + + + D KD LRE+I A+R G Sbjct: 480 ALHLQGLPVEED-----REDFVADACAAAADAVAKGGKDEAKLREAIRLAVRRRATSWTG 534 Query: 544 KKPLVTVFINKI 555 KKP+V V I ++ Sbjct: 535 KKPVVDVAIIRV 546 >gi|119384960|ref|YP_916016.1| beta-lactamase domain-containing protein [Paracoccus denitrificans PD1222] gi|119374727|gb|ABL70320.1| beta-lactamase domain protein [Paracoccus denitrificans PD1222] Length = 558 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 197/558 (35%), Positives = 300/558 (53%), Gaps = 5/558 (0%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIM 62 E L++LPLGG GEIGMN +YGYG P + I++D GV+F D PG+DL+ D+ ++ Sbjct: 3 ERLIYLPLGGAGEIGMNAYVYGYGQPGRERLIVVDLGVTFGDMDSAPGIDLIMADVAWLE 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 R + AIFITH HEDH GAL LW L PV+ F L K I Sbjct: 63 ANRDRIDAIFITHGHEDHVGALGLLWPRLQKPVHCRRFTGALARLKLEEAGQPVDQLHIH 122 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D V G F ++ V ++HSIPE+ AL+I +P G IVHTGD+KLD ++G+ D Sbjct: 123 APRPDVVTAGPFRVQFVPISHSIPESSALIIDTPAGRIVHTGDFKLDGTPVVGEAFDPIL 182 Query: 183 LCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 I NE GI L CDSTN SE + + D + + V+ TTF+S+++R+ Sbjct: 183 WHDIANEGQGIKVLTCDSTNVFSPHPGRSEAVLANPLLDFVMAQRQMVVATTFASNIARL 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +++ + GRKI LLG +++R+V+V ++ GI+ F+ E PR+++++I TG Sbjct: 243 KTLAEAGVAAGRKICLLGRAMRRMVTVGVETGILTNFPSFIGPEEASELPRDKVMLIVTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+A AQLSRG ++L E D+ +FSSR IPGNE + I N L E GV + + Sbjct: 303 SQGERRAASAQLSRGRYLGIELKEGDSFLFSSRTIPGNERGVIRIMNALSEMGVDL-YDA 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + HVSGH D++ ++ ++PQ+++ +HGE +HL H +LA GI V NG Sbjct: 362 EDGLYHVSGHANRPDIEAVHDLLKPQIVIPMHGEHMHLREHAKLAEARGIPSV-VATNGT 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ML L ++D++ G DG ++ D + R +++ G V+V++D + Sbjct: 421 MLDLSGTAPRVVDQIDTGRLYLDGTMLIGAMDGVVRDRIRMALNGRAMVSVIIDEDDSPL 480 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + G+P G + + + + + D L E+I R + + Sbjct: 481 PDAWVELSGLPELGRAGVPLARNIEGELAEFLERADDRTVMDDDRLEEAIRKITRQVSME 540 Query: 541 VWGKKPLVTVFINKISRQ 558 GKKP VTV I++++ + Sbjct: 541 EIGKKPEVTVVISRLAAE 558 >gi|319955819|ref|YP_004167082.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] gi|319418223|gb|ADV45333.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] Length = 692 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 163/555 (29%), Positives = 288/555 (51%), Gaps = 11/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L F PLGG+GEIG N+A+ + + I+ID G+SFP + + GVD++ PD +++ Sbjct: 141 KGKLRFTPLGGLGEIGGNIAVLE----TEKDAIIIDVGMSFPDETMHGVDILVPDFSYLH 196 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV-SKKIPCI 121 + + AI ITHAHEDH GA+ L+ L P+Y +P A+ ++ K + + K Sbjct: 197 AIKDKIRAIVITHAHEDHIGAVPYLFKELKFPIYGTPLALAMIGNKFDEHGLQADKKYFR 256 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D+G F IE + + HSI ++ +L I++P+G ++HT D+K+D I G D Sbjct: 257 YVVKRKIYDIGEFKIEWMHMTHSIVDSSSLAIQTPIGTLIHTADFKIDHTPIDGYTADLH 316 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 G +G+L L DSTN+ G SE + K + + AKG V+++TFSS+ RI Sbjct: 317 RFAHYGAQGVLCLFSDSTNSHNPGFTKSEAVVGKTFDKLFEMAKGRVIMSTFSSNAHRIF 376 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I+ + GRKI ++G S++R + +G I D+ F+ G Y +++V+ TG Sbjct: 377 QAIERGVKHGRKICVIGRSMERNIETVRRLGYIDVDDKHFIEAHEVGKYKDSEILVVTTG 436 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE +AL++++ E R++KL DTVI S+ AIPGNE ++ + N L++ GV V ++ Sbjct: 437 SQGETMAALSRMATDEHRHIKLKPTDTVIISASAIPGNEASVSKLLNLLLKAGVTVRYKE 496 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH + K + + ++P+ + +HGE H+ AH A G+ + + + Sbjct: 497 C-SDIHVSGHASQEEQKLILRLVQPKFFLPVHGEYNHIAAHARTAASCGVDERNMLLMSD 555 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G + + I+ + V G D + + R++LS G +++ + Sbjct: 556 GDQIEITTKYIKKVKTVKTGKRYIDNQNNKEIYADVVDDRQKLSTEGVVNIVAKISTQTG 615 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G+ D + + K + + + + +V+ K++ + + +R Sbjct: 616 RMVDHPIVTSYGL-VPDREDKQFAKEIEQLIESYLVNNKVDPTVSNKVIEDDLRGVVRKH 674 Query: 538 LKKVWGKKPLVTVFI 552 + K + K P++ + Sbjct: 675 ILKRYKKYPIIIPAV 689 >gi|268678705|ref|YP_003303136.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268616736|gb|ACZ11101.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 664 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 297/556 (53%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N+ ++ + I++D G+SFP +D+ GVD++ PD +++ Sbjct: 112 SKGKIKITPLGGLGEIGGNICVFE----TENSAIVLDVGMSFPSEDMHGVDILVPDFSYL 167 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 + RK + I I+HAHEDH GA+ L+ + P+YA+P +G++ K + K Sbjct: 168 RQIRKKIAGIIISHAHEDHIGAIPYLFKEMQCPLYATPLPLGMISNKFDEHGLKGHKKYF 227 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +G F +E + + HSI + AL I + G I+HTGD+K+D I G VTD Sbjct: 228 RPVEKRKVYKIGEFEVEWIHITHSIIDASALAITTEAGTIMHTGDFKIDHTPIDGYVTDL 287 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + G +G+L LM DSTN+ +EG SE + K I AKG V+++TFSS++ R+ Sbjct: 288 NRFSDYGEKGVLCLMSDSTNSYKEGITRSESTVGKTFDSIFSKAKGRVIMSTFSSNIHRV 347 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIAT 299 ID + GR++ ++G S++R + AID+G I+ D+ +F+ + + ++++ T Sbjct: 348 YQAIDYGLKYGRRVCVIGRSMERNLFTAIDLGYIQLDKSIFIDPHEVNKHNDKDVLIVTT 407 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R+VK+ D +I S++AIPGNE ++ + N L++ G V + Sbjct: 408 GSQGETMSALYRMATDEHRHVKIKPTDQIIISAKAIPGNEGSVSKVLNFLLKSGANVAYQ 467 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 D +HVSGH + K + + +P+ + +HGE H+ HKE A+Q GI + + Sbjct: 468 DF-SEIHVSGHAAQEEQKLILRLTKPKFFLPVHGEYNHITKHKETAMQCGIPERNIYLMS 526 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-H 476 +G + + ++ I + G D + + AD + R++L+ G + + + LD Sbjct: 527 DGDQVEVCGKYLKKIKTIKTGKIFIDNQINQQIADDVVIDRQKLADSGLVMLVIQLDKSE 586 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + P+I+ G+ + D + + + +V+ ++ + L + +R Sbjct: 587 HKLIAKPKIISYGLVS-DREDKAFSVEMEGVIDQFIVNAKAELLENSRALENELRQVVRK 645 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P + I Sbjct: 646 HIYRQMKKYPTIVPTI 661 >gi|296271692|ref|YP_003654323.1| RNA-metabolising metallo-beta-lactamase [Arcobacter nitrofigilis DSM 7299] gi|296095867|gb|ADG91817.1| RNA-metabolising metallo-beta-lactamase [Arcobacter nitrofigilis DSM 7299] Length = 644 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 159/556 (28%), Positives = 285/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ PLGG+GEIG NM + + + I++D G+SFP +D+ GVD++ PD T+I Sbjct: 92 STQKVRITPLGGLGEIGGNMMVIE----TEKSAIIVDVGMSFPDEDMHGVDILIPDFTYI 147 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 + + + A+ ITH HEDH GA+ L+ + P+Y + + ++ +K ++ + Sbjct: 148 REIKDKIAAVIITHGHEDHIGAMPYLFKEMQFPIYGTSLPLEMIGSKFDEHKMRQHRGYF 207 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + Q + +G F IE + + HSI + +L I + G I+HTGD+K+D I G +D Sbjct: 208 HAIQKRTPIKIGDFEIEWMHITHSIIDASSLAITTDAGTIIHTGDFKIDHTPIDGFPSDL 267 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G +G+L LM DSTN+ G SE + + AKG V+++TFSS+ R+ Sbjct: 268 HRFAHYGEKGVLLLMSDSTNSHTAGFTKSESTVGPTFDTLFSKAKGRVIMSTFSSNTHRV 327 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIAT 299 I+ + GRK+ ++G S+++ + +A+ +G I F+ Y Q++++ T Sbjct: 328 AQAIEHGLKYGRKVCVIGRSMEKNLELAMALGYIKFPRDQFIEPHEVHKYDDNQILIVTT 387 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL ++S E R++K+ D +I S++AIPGNE ++ I N L++ G V + Sbjct: 388 GSQGESMSALYRMSIHEHRHIKIKPGDQIILSAKAIPGNEASVSQIINHLLKAGAEVAYQ 447 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + +HVSGH + K M + ++P+ + IHGE H V H++ + G+ + Sbjct: 448 NF-SEIHVSGHAAQEEQKLMLRLVKPKFFMPIHGEYNHAVKHQQTGISCGVLERNTYIMS 506 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G+ + + P ++ + V G D L K AD I R+ ++ G + + ++ + Sbjct: 507 DGEQIEVTPKYLKKVKTVKSGKTYIDNQLNNKIADDIILDRQTMANEGVVMIVAQINEND 566 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + G+ + D K + + T + + K+ K L + I +R Sbjct: 567 RKLSDKTRVTSFGLVPDNQDR-FFAKEIEDLLETFFSNAKEGMFKNTKYLEDEIRKVVRK 625 Query: 537 LLKKVWGKKPLVTVFI 552 + + K P++ I Sbjct: 626 HCVRKFKKYPMIVPTI 641 >gi|116333993|ref|YP_795520.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis ATCC 367] gi|116099340|gb|ABJ64489.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus brevis ATCC 367] Length = 610 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 140/559 (25%), Positives = 268/559 (47%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 4 KIKIIPFGGVRENGKNMYAV----DVNGGIYILDCGLKYPENELLGIDVVIPDWTYLREN 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISF 123 + ++A+F+TH H D GAL S +VPV+ S I L + E ++ K Sbjct: 60 KDRIVAVFLTHGHADAIGALPYFLSEFNVPVFGSEMTIALAKINVADEPKIKKFDDFHVI 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + HSIPE++ + +++ G I++TGD+K D A G TD L Sbjct: 120 DEKTEIDFGDVVVSFFSTTHSIPESLGIDLKTDEGQIIYTGDFKFDQTAKPGYQTDYARL 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG G+LAL+ DS NA SE+ + ++I + V+V +S++ RI+ + Sbjct: 180 GAIGQAGVLALLSDSANAENPAMNASEQSLAESIEETFHYRDSRVIVACVASNILRIQQV 239 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQ 302 D A + GRK+ L G L+++V+ A+++G + D L ++ + +++++ TG Sbjct: 240 FDAAAKTGRKVCLTGKDLEKIVNTAMELGKLTFDADLLVTTDQLDDLAPNEIVILQTGKM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP A+ +++ + ++ + D V ++ + + ++ + G V A E Sbjct: 300 GEPIKAIQRMANKQEKDFNIQAGDLVYITTTPSHAMDTTVAQTRDMVYRAGGEVKAISDE 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ SGH Y DL+ M ++P+ L+ I GE L AH + A++ GI + + G Sbjct: 360 --LNSSGHAYKRDLQLMLNLMKPKFLIPIQGEYRLLNAHADAAMELGIPADHIFILSKGD 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 +L + + + + + DG +G ++ + R+ L+ G V +D I Sbjct: 418 VLTYAQGDMGLGEGIDVSDTMIDGIGVGDIGNIVLRDRKVLADDGIFIAVVTIDRKKKQI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G Y + + + + V + + D L++ + L L Sbjct: 478 VADPKITSRGF-VYVKANKDLMQESSQIIRKAVQNNLDNKEFDWGHLKQDVREHLSHYLF 536 Query: 540 KVWGKKPLVTVFINKISRQ 558 + ++P++ I ++++ Sbjct: 537 EQTHRRPVILPVIMEVNQH 555 >gi|116071736|ref|ZP_01469004.1| hypothetical protein BL107_06289 [Synechococcus sp. BL107] gi|116065359|gb|EAU71117.1| hypothetical protein BL107_06289 [Synechococcus sp. BL107] Length = 690 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 164/561 (29%), Positives = 289/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 15 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P +Y A+ +L K V+ + + Sbjct: 71 KRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVTDRTTLQTVA 130 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D L Sbjct: 131 PRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGEHFDMARL 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L DSTNA G C E+ + N+ + NA G V+VTTF+SS+ R+ I Sbjct: 191 AHYGEKGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHIANADGRVIVTTFASSIHRVSMI 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 251 LELAMKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLMTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRG+ VK+ DT+IFS+ IPGN +++ + ++L+ G +V+ E Sbjct: 311 GEPLAALSRISRGDHPQVKVKTTDTIIFSASPIPGNTISVVNTIDKLMMLGAKVVYGKGE 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + + + NG Sbjct: 371 G-IHVSGHGFQEDQKLMLALTKPKFFVPVHGEHRMLVQHSKTGHSMGVPVNNTLIIENGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P+ + D V G+ L D G + +R+QL+ G +++ + + Sbjct: 430 VVELTPESLRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILSAISTDGAMV 489 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + + D ++ + Sbjct: 490 APPRVNLRGVVTT-ADARKMSLWTEREITWVLENRWKQLSRNTGDKAPEVDWMGVQREVE 548 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 549 VGLGRRMRRELQVEPLILCLV 569 >gi|303247589|ref|ZP_07333860.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio fructosovorans JJ] gi|302491069|gb|EFL50963.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio fructosovorans JJ] Length = 551 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 179/558 (32%), Positives = 285/558 (51%), Gaps = 13/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG+N S I++DCG+ FP D L G+D+V P FI Sbjct: 3 STPAVTLYPLGGLGEIGLNCMAL----VSGESMIVVDCGLMFPDDSLFGIDVVIPRFDFI 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + L I +TH HEDH GAL L +Y S F + L K + + Sbjct: 59 LANKDKLKGIILTHGHEDHIGALPWLMRSCDATLYGSSFTLALAAKKLEEHNLKEFTHFE 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G + +G F + V HSI L I +P G IVHTGD+K+D + G TD Sbjct: 119 AVEGGQTITLGDFKVTFFPVCHSIVRGFGLGIETPAGRIVHTGDFKIDRTPLDGHATDLP 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++ A +G++ L+ DSTNA REG ++E+ IK + I K A G ++VT FSS + R++ Sbjct: 179 AIKAFSEKGVMLLLSDSTNAEREGFALAEREIKSALAGIFKEAAGRIVVTLFSSHIQRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I D+A GRK+ + G SL + +A ++G ++ S + P Q++++ TG Sbjct: 239 EIYDLAHASGRKVAVSGKSLFSNIEIARELGHLRVPAGAEASLDDLPSLPDNQVVLLVTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++L+ GE R +K+ + DTVI SSR IPGN AI + NRL + G V+ E Sbjct: 299 SQGEPLSALSRLAYGEHRQIKVQKGDTVILSSRFIPGNVRAITRLINRLYKLGAEVLYES 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRN 418 + +H SGH + +L+ M + + P+ + +HGE HLV H + + G+A + + Sbjct: 359 VQA-IHASGHAHAEELRLMLRTVSPKFFIPVHGEYRHLVKHARIGVSCGVAPERALVIED 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+ + I + D + DG +G + +R+ L+ G + V +++D Sbjct: 418 GQPVTFSDGLIRLEDPIPVEHIYVDGKGVGDVGVTVLKERQLLAGEGLVIVVMVVDEKTG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P I+ G ++ + + V+ ++P + LL+E I SALR Sbjct: 478 ELTFGPNILSKGF-VFEQHYSHVLEDAKCIVLDIYENVPPGQS---DLLKERIRSALRRF 533 Query: 538 LKKVWGKKPLVTVFINKI 555 +KV + P+V + + Sbjct: 534 FRKVLERDPVVVPLVITL 551 >gi|218888010|ref|YP_002437331.1| beta-lactamase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758964|gb|ACL09863.1| beta-lactamase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 553 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 175/555 (31%), Positives = 289/555 (52%), Gaps = 14/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG+GEIG+N ++ + +++DCG+ FP+D GVD+V P +++ R Sbjct: 8 LTITPLGGLGEIGLNCQIW----STPDSMVLVDCGLMFPEDYHLGVDVVIPRFDHVLQNR 63 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + I +THAHEDH GAL L L P+Y S F + L+E K ++ ++ + Sbjct: 64 HRVRGIVLTHAHEDHIGALPWLMPHLKAPIYGSRFTLALVEHKLREHGLADRVELVPVSP 123 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + +G + + V HSI E AL + +P G +VHTGD+K+D + + G TD Sbjct: 124 DAPLVLGDMTFRFLPVCHSIIEGYALAVETPAGRVVHTGDFKIDPNPLSGPGTDLALFRD 183 Query: 186 I-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G+EG+ L+ DSTN R+G + E+ I + A+G ++VT FSS + RI+ + Sbjct: 184 FAGDEGVRLLLSDSTNIERDGQSLGEREIMDTFRQLFDEAEGRIVVTLFSSHIQRIQEVF 243 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 D+A + GRK+V+ G SL + +A ++G ++ + + L + L+++ TGSQG Sbjct: 244 DLASEFGRKVVVSGRSLMNNIEIARNLGFLRAEAGMILDAVTMPPMADRDLVLLVTGSQG 303 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++ GE + + + DTV+ SSR IPGN AI + N L G V + Sbjct: 304 EPLSALSRIIMGEHKQLCIHRGDTVVMSSRFIPGNARAITKLINELYRLGAEVYYDKVRS 363 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKM 421 +H SGH + ++L+ M + +RP+ V +HGE HLV H LA + G+A + NG Sbjct: 364 -IHASGHAHRDELRAMIEAVRPRYFVPVHGEYRHLVKHCRLAQECGVAQERTIILENGDP 422 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIF 480 + L PD + + V L DG +G + +R L G + V +++D+ + Sbjct: 423 ITLTPDSVRFEEHVPVEFILVDGKGVGDVGHSVLKERHILGGEGMVIVVLVVDDTGWEVL 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 PE++ G ++ + + V+ ++P + + L++ I S+LR +K Sbjct: 483 HGPEMLSKGF-VFEQHYNHVLEDAKCIVLDIFENIPPG---ETERLQDRIRSSLRRFFRK 538 Query: 541 VWGKKPLVTVFINKI 555 V + P+V I I Sbjct: 539 VLERDPIVVPVITTI 553 >gi|148259948|ref|YP_001234075.1| beta-lactamase domain-containing protein [Acidiphilium cryptum JF-5] gi|146401629|gb|ABQ30156.1| beta-lactamase domain protein [Acidiphilium cryptum JF-5] Length = 548 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 203/550 (36%), Positives = 322/550 (58%), Gaps = 9/550 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F PLGG GEIGMN+ +YG +++DCG+ F + P +L+ PD F+ R Sbjct: 8 LSFTPLGGTGEIGMNLNVYG----LDGDLLVVDCGMGFAGPEAPEAELLVPDPAFLAANR 63 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITHAHEDH G + +W L PVYA+PFA L+ + + + + Q Sbjct: 64 DRIAGLVITHAHEDHIGGIARIWDALRCPVYATPFAAALIRYRLGEAGLLRSVRITEIQP 123 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +VG F++ +R++HS PE+ ALV+ + G ++HTGDWKLD + ++G TD+ +L A Sbjct: 124 GAAFEVGPFALRYIRMSHSTPESQALVLTTKYGTVLHTGDWKLDPEPLIGPPTDEAALEA 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G+ G+LA++CDSTNA+ EG SE +++++ ++ +G ++VT F+S+++RI +++ Sbjct: 184 LGDAGVLAMICDSTNALVEGHSGSEATVRRSLTSLIAGLRGRIVVTCFASNIARIDTVVK 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GR + L+G SL + V A + G + F+ ++ G P + L+++ATGSQGE Sbjct: 244 AAAAAGRHVALVGRSLGKYVEAAQEAGYLADLPDFVPEDEVGAIPDDSLLILATGSQGEK 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 RSALA+++ RNV L E DTVIFS+R IPGNE AIG +++ LV GV V+ + + V Sbjct: 304 RSALARIAADTHRNVALGEGDTVIFSARVIPGNERAIGAVQDELVRAGVNVMTD-DDHMV 362 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 HVSGHP ++L+R+Y+ +RP+ LV HGE H+ A +LA GI + +G +LRL Sbjct: 363 HVSGHPARDELRRLYRLVRPKYLVPTHGEWRHMAAQADLAEAAGI-STLLLEDGDVLRLA 421 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 P+P +++D V G DG + +A RR++ G + ++ +D + G +I Sbjct: 422 PEPPQVVDSVPVGRLAVDGDRLVPMQGGVMAARRRMMLNGVVVASIAVDRAGKVKGGAQI 481 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 G+ D L + + T DLP R D ++E+ +ALR L + +GK+ Sbjct: 482 AAPGLFEAD---DHALGALAEDFVATFEDLPANLRTDRNAVKEAAQTALRRALGRRFGKR 538 Query: 546 PLVTVFINKI 555 P+V V + I Sbjct: 539 PMVEVHVLHI 548 >gi|257877293|ref|ZP_05656946.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257811459|gb|EEV40279.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 560 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 152/561 (27%), Positives = 263/561 (46%), Gaps = 13/561 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + +PLGGV E G NM + G ++DCGV +P+++L G+D V PD T++ + Sbjct: 2 ETIKIIPLGGVRENGKNMYIAEVG----EDIFVLDCGVRYPENELLGIDTVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 + +F+TH H D GAL + VPV+ + I L + +K+ Sbjct: 58 NADRVAGVFLTHGHADAIGALPYFLENIQVPVFGTELTIELAKLTVNKNEATKRFKDFHV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G +I R HSIP+++ + +++ GNIV+TGD+K D AI TD Sbjct: 118 IDEHSEIDFGHATISFFRTTHSIPDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ S+NA SE I+ +YD ++ +G ++V + +S++ R++ Sbjct: 178 LAEIGKEGVLALLSTSSNAENPTPIASELTIQDEVYDNIRYWEGRIIVASVASNLQRVQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATG 300 ++D A + RK+VL G R++ A+ +G +K L ++ + Y EQL+++ TG Sbjct: 238 VLDAAFRSDRKVVLTGQDFGRIIKTAMKLGKLKLPAEDLLITQKEMKKYSDEQLLILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ G R +++ E D V ++ E + ++ + G V Sbjct: 298 RMGEPIKALQKMANGSHRTLRIKEGDLVYITTTPTTAMETVVAKTEDIIYRAGGTVKQIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VSGH PNDL+ M ++P+ + I GE L AH +LA + + + Sbjct: 358 DNFR--VSGHANPNDLQLMLNMMKPKYFIPIQGEYRQLAAHVDLAQEVGIPMKNIFITAR 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + V + DG +G ++ + R+ LS G V ++ Sbjct: 416 GDVLEYKKGEMLAAGAVPAENVMIDGIGVGDIGNIVLRDRKVLSEDGIFVAVVTINRREK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V V + L++ I L Sbjct: 476 KIISAPQITSRGF-VYVKASRDLIRESGEIVEEIVEKHLHDEEFEWSKLKQDIRDRLSRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + S++ Sbjct: 535 LFEQTKRRPVILPVIMESSQR 555 >gi|283851255|ref|ZP_06368538.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] gi|283573424|gb|EFC21401.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] Length = 551 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 184/558 (32%), Positives = 289/558 (51%), Gaps = 13/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + PLGG+GEIG+N S I++DCG+ FP D L G+D+V P FI Sbjct: 3 QTSAVTLYPLGGLGEIGLNCMAL----VSGDSMIVVDCGLMFPDDSLFGIDVVIPRFDFI 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + L I +TH HEDH GAL L P+Y S F + L K + + Sbjct: 59 LANKDKLKGIILTHGHEDHIGALPWLMRSCDAPLYGSKFTLALAAKKLDEHSLKEFTRFE 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G F I V HSI AL I +P G IVHTGD+K+D + + G TD Sbjct: 119 PVSGGQTLTLGDFRITFFPVCHSIVHGYALGIETPAGRIVHTGDFKIDRNPMDGHATDLP 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++ A G+L LM DSTNA R+G ++E+ IK + DI +A G ++VT FSS + R++ Sbjct: 179 AIKAFAEPGVLLLMSDSTNAERDGFALTEREIKSALADIFTDAPGRIVVTLFSSHIQRMQ 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + D+A GRK+ + G SL + +A D+G ++ + S + P Q++++ TG Sbjct: 239 EVYDLAHATGRKVAVSGKSLFSNIEIARDLGHLRVPEGTEASLDDLPGLPDHQVVLLVTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP SAL++L+ GE R +K+ + DTVI SSR IPGN AI + NRL + G V+ E Sbjct: 299 SQGEPLSALSRLAYGEHRQIKVHKGDTVILSSRFIPGNVRAITRLINRLYKLGAEVLYER 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRN 418 + +H SGH + +L+ M + + P+ + +HGE HLV H +A+ G+A + + Sbjct: 359 VQA-IHASGHAHGAELRLMLETVAPKFFIPVHGEYRHLVKHSRIAVDCGVAPERALVIED 417 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G+ + I + D + DG +G + +R+ L+ G + V +++D Sbjct: 418 GQPVTFKNGLIRLEDPIPVEHIYVDGKGVGDVGVTVLKERQLLAGEGLVIVVMVVDEKSG 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P I+ G ++ + + V+ ++P + LL+E I SALR Sbjct: 478 ELTFGPNILSKGF-VFEQHYSHVLEDAKCIVLDIYENVPPGQS---DLLKERIRSALRRF 533 Query: 538 LKKVWGKKPLVTVFINKI 555 +KV + P+V + + Sbjct: 534 FRKVLERDPVVVPLVITL 551 >gi|183981977|ref|YP_001850268.1| hydrolase [Mycobacterium marinum M] gi|183175303|gb|ACC40413.1| conserved hypothetical hydrolase [Mycobacterium marinum M] Length = 558 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIIDCGVLFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH GA+ L +P+ S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGAIPFLLRLRPDIPIVGSKFTLALVAAKCREYRI--KPVFVEVA 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G G F E VNHS+P+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGQSSRHGVFECEYFAVNHSVPDALAIAVYTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTN+ G SE + ++ +++ A G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNSEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + + P EQ+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVDDSDVIDIGAAEMMPPEQVLLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D ++ SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDSLSKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASAGVAPESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G ++ + +R LS G ++V V++ Sbjct: 429 VDLVGRKASIAGAVPVGKMFVDGLITGDVGEITLGERLILS-SGFIAVTVVVHRGTGRPA 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 VP + G + K + ++ V + L D + + + + + + Sbjct: 488 AVPHLHSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|225021184|ref|ZP_03710376.1| hypothetical protein CORMATOL_01196 [Corynebacterium matruchotii ATCC 33806] gi|224945917|gb|EEG27126.1| hypothetical protein CORMATOL_01196 [Corynebacterium matruchotii ATCC 33806] Length = 585 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 277/556 (49%), Gaps = 15/556 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L LGG+ EIG NM ++ Y + +++DCGV FP PGVDL+ PD I Sbjct: 18 KNGLRIYALGGISEIGRNMTVFEY----NNHLLIVDCGVLFPSSGEPGVDLILPDFGPIE 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + N+ A+ ITH HEDH GA+ L +P+ AS F + L+ AK K+ + Sbjct: 74 DKIGNVDALVITHGHEDHIGAIPWLLKLRPDLPIIASKFTLALIAAKCREHHQRPKLIEV 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + G F++ VNHSIP+ + + I++ G +V TGD KLD G TD Sbjct: 134 GNTSVENR--GPFNLRFWAVNHSIPDCLGIAIKTKAGLVVMTGDIKLDQTPPDGRPTDLP 191 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L +G+EGI +CDSTNA G SE I + I+ +AK V++ F+S+V R++ Sbjct: 192 ALSRLGDEGIDLFLCDSTNATTPGISGSESAIAPTLKRIVADAKQRVILACFASNVYRVQ 251 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG 300 + +D A GRK+ G S+ R + +A +G ++ +S + ++++I TG Sbjct: 252 AAVDAAVAAGRKVAFNGRSMIRNMEIAEKLGYLRVPRGTIVSMDDATKMAPHKVMLITTG 311 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGEP +AL++++R E R + + + D ++ SS +PGNE A+ + N L + G VI Sbjct: 312 TQGEPMAALSRMARREHRQITVRDGDVIVLSSSLVPGNEEAVFGVINMLAQIGATVITNK 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 + VH SGH Y +L +Y RP+ + +HGE HL A+KELA+ G+ V +N Sbjct: 372 -DANVHTSGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAIATGVDRNQVVLAQN 430 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ + I + ++ G DG +G + R + G +S+ ++DN Sbjct: 431 GVVVDMVNGKISVAGQIPVGNLYVDGVTMGDIDQEVLDDRTSMGEGGLISITAVIDNRTG 490 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P + G D + + V T+ DL D + + + + Sbjct: 491 RLLEHPTVHAKGFS---DDAKTMMPEVQNLVENTMNDLAAEGENDPYRMVQHLRRKVSRY 547 Query: 538 LKKVWGKKPLVTVFIN 553 +++ W + P++ + Sbjct: 548 VEQTWRRNPMIMPTVV 563 >gi|257867183|ref|ZP_05646836.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257873518|ref|ZP_05653171.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257801239|gb|EEV30169.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257807682|gb|EEV36504.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 560 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 152/561 (27%), Positives = 263/561 (46%), Gaps = 13/561 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + +PLGGV E G NM + G ++DCGV +P+++L G+D V PD T++ + Sbjct: 2 ETIKIIPLGGVRENGKNMYIAEVG----EDIFVLDCGVRYPENELLGIDTVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 + +F+TH H D GAL + VPV+ + I L + +K+ Sbjct: 58 NADRVAGVFLTHGHADAIGALPYFLENIQVPVFGTELTIELAKLTVNKNEATKRFKDFHV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G +I R HSIP+++ + +++ GNIV+TGD+K D AI TD Sbjct: 118 IDEHSEIDFGHATISFFRTTHSIPDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ S+NA SE I+ +YD ++ +G ++V + +S++ R++ Sbjct: 178 LAEIGKEGVLALLSTSSNAENPTPIASELTIQDEVYDNIRYWEGRIIVASVASNLQRVQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATG 300 ++D A + RK+VL G R++ A+ +G +K L ++ + Y EQL+++ TG Sbjct: 238 VLDAAFRSDRKVVLTGQDFGRIIKTAMKLGKLKLPAEDLLITQKEMKKYSDEQLLILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ G R +++ E D V ++ E + ++ + G V Sbjct: 298 RMGEPIKALQKMANGSHRTLRIKEGDLVYITTTPTTAMETVVAKTEDIIYRAGGTVKQIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VSGH PNDL+ M ++P+ + I GE L AH +LA + + + Sbjct: 358 DNFR--VSGHANPNDLQLMLNMMKPKYFIPIQGEYRQLAAHVDLAQEVGIPMKNIFITAR 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + V + DG +G ++ + R+ LS G V ++ Sbjct: 416 GDVLEYKKGEMIAAGAVPAENVMIDGIGVGDIGNIVLRDRKVLSEDGIFVAVVTINRREK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V V + L++ I L Sbjct: 476 KIISAPQITSRGF-VYVKASRDLIRESGEIVEEIVEKHLHDEEFEWSKLKQDIRDRLSRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + S++ Sbjct: 535 LFEQTKRRPVILPVIMESSQR 555 >gi|197120523|ref|YP_002132474.1| beta-lactamase [Anaeromyxobacter sp. K] gi|196170372|gb|ACG71345.1| beta-lactamase domain protein [Anaeromyxobacter sp. K] Length = 546 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIGMN + ++DCGV FP + GVDL+ PD++++ + R Sbjct: 1 MRIVPLGGLGEIGMNCMAVE----CDGRIAVVDCGVLFPNES-LGVDLIAPDLSWLRERR 55 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + A+F+TH HEDH GAL L + VPVY + F + LL + V + + + Sbjct: 56 EQVGAVFLTHGHEDHLGALPFLLREVPVPVYGTRFTLALLRPRLDEAGVRADLREV--RP 113 Query: 126 GDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 GD G + E + V HSIP+ L + +P G ++H+GD+K+D + G D D Sbjct: 114 GDVRPAGDASPIAAEFLAVTHSIPDACGLALSTPQGTLLHSGDFKIDPAPVRGPGMDLDR 173 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G +G+ L+ DSTNA REGT +SE + + + A+G V V F+S+V R++ Sbjct: 174 IEALGRKGVRLLLSDSTNAEREGTSLSESQVGPALEQAFELARGRVFVACFASNVHRLQQ 233 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 I++ A GR++ LG S++ +A ++G ++ +S E P +L V+ TG+ Sbjct: 234 IVNAARAFGRRVAFLGRSMEANARLAQELGYLELPAWMPVSPEEARTLPPRELCVLTTGT 293 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSALA+L+RGE ++ ++ D V+ SSR IPGNE+AIG + N L +G V E Sbjct: 294 QGEPRSALARLARGEHPDLAVSPGDLVVLSSRFIPGNEIAIGQVVNELCRRGAEVAYEGL 353 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+HVSGH ++ +R+ + RP V IHGE HL H A EG+A + +G++ Sbjct: 354 -APLHVSGHAQADEQRRLIRLARPAHFVPIHGEYRHLSRHAAHAAAEGVAGRDVLVDGQV 412 Query: 422 LRLFPDPIEIIDE-VVHGLFLKDGFLIG--KFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 L L + ++DE V G D + L + RR L+ G + ++ Sbjct: 413 LELADAGVRVLDEPVATGRVYTDRDALLGADIGALVVRDRRLLAETGLCIAVLAIERTTG 472 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE+ G+ ++G ++ ++ + DL R D ++E++ A+R Sbjct: 473 AVVRGPELFARGVAGFEGAEEELRAE----ILAGLGDLSPKARTDPAEVQEAVRLAVRRF 528 Query: 538 LKKVWGKKPLVTVFINKI 555 ++ GKKP V + ++ Sbjct: 529 FRRTTGKKPPVLPVVLEL 546 >gi|319405683|emb|CBI79306.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 558 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 260/553 (47%), Positives = 391/553 (70%), Gaps = 1/553 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ELVFLPLGGVGEIGMN+A YG+G R+W+++D GVSF +LPGVDL+ PDI F+ Sbjct: 5 NNNELVFLPLGGVGEIGMNLAAYGFGPKDCREWLLVDMGVSFAGPELPGVDLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E+ N+ + +THAHEDHYGA+ DLW L +P+Y + F GLLE+KR + +IP Sbjct: 65 ESEKHNICGLILTHAHEDHYGAVLDLWPKLKIPLYCTCFTAGLLESKRQSDFEFHEIPVN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQ+GD VG F+IE++ VNHSIPE ++L I + +G+++HTGDWK+D LG +T+++ Sbjct: 125 IFQSGDYFQVGPFAIEAISVNHSIPEAVSLAITTSLGSVIHTGDWKIDHTPSLGAITNEE 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+GN+G+LAL+CDSTNA+++G SE+ ++K+I +I+ A+G + +TTF+S++ RIR Sbjct: 185 RFRALGNKGVLALLCDSTNALQDGIAPSEQQVQKSISEIILKARGRIAITTFASNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI A +GR+++L+G SLKR V VA ++ + F+++E +G PRE ++++ TGS Sbjct: 245 SIALAAASVGRQVLLVGRSLKRSVMVAQELNYMDDIAPFITEEDYGHIPRENIVLVVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR EM+N+ L+ DTVI+SSR IPGNE AI I+NR ++QG+ +I Sbjct: 305 QGEPRAALAKLSRNEMKNIILSPGDTVIYSSRNIPGNEKAIIDIQNRFIDQGINIITNR- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L +MY W +PQ+L+ +HGE +HL A LA Q GI V +RNG + Sbjct: 364 DALVHVSGHPRRSELLQMYDWTKPQILIPVHGEAVHLTAQATLAQQAGIKVVARIRNGDI 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 RL P+P+EIID+V G KDGFL+G +LGI +R +LS+VGH+SV++ +++ +++ Sbjct: 424 FRLAPEPVEIIDQVFVGRIYKDGFLLGNEDELGIRERCKLSYVGHVSVSLHMNSKHDLID 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 + +GIP D G + +LL + + ++P+ +RKD +L+RE+ A+R+ + K+ Sbjct: 484 DIALTTLGIPKSDRAGKLLENILLNVIENAINNIPRAKRKDNELIREAARRAVRAAVNKI 543 Query: 542 WGKKPLVTVFINK 554 WGKKP+ VF+++ Sbjct: 544 WGKKPICVVFLHR 556 >gi|293571154|ref|ZP_06682192.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|291608767|gb|EFF38051.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] Length = 559 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 151/561 (26%), Positives = 260/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 59 IDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI TD L Sbjct: 119 DEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 +D AE+ RK+VL G +R++ A+ + ++ L ++ + Y E+LI++ TG Sbjct: 239 LDAAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISE 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P V + GE L AH +LA + G Sbjct: 359 N--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + DG IG ++ + R+ LS G V + Sbjct: 417 DVLEYKNKRMSAAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + K + T V + + L++ I L L Sbjct: 477 IISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + +++R Sbjct: 536 FEQTKRRPVILPVIMEATQRR 556 >gi|87301617|ref|ZP_01084457.1| hypothetical protein WH5701_03044 [Synechococcus sp. WH 5701] gi|87283834|gb|EAQ75788.1| hypothetical protein WH5701_03044 [Synechococcus sp. WH 5701] Length = 673 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 170/565 (30%), Positives = 291/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD +++ Sbjct: 13 KQPALRVIPLGGLHEIGKNTCVFEYG----DELMLVDAGLAFPSDGMHGVNVVLPDTSYL 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 69 RENQKRIRGMIVTHGHEDHIGGIPHHLKNFNIPVIYGPRLAMSMLQGKMEEAAVTDRTVI 128 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG F +E +R HSI ++ +L I +PVG ++ TGD+K D + G+ D Sbjct: 129 QTVSPRDVVKVGQHFQVEFIRNTHSIADSFSLAITTPVGVVIFTGDFKFDHTPVDGEYFD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G +G+L L DSTNA G E+ + N+ N+ G V+VTTF+SSV R Sbjct: 189 IQRMAHYGEQGVLCLFSDSTNAEVPGFTPPERSVFPNLDRHFANSDGRVIVTTFASSVHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G I+ D+LF+ + P + +++ Sbjct: 249 VSMILELAMKHGRKVGLLGRSMLNVIAKARELGYIRCPDELFVPIKQIRDLPDRETLLLM 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 309 TGSQGEPLAALSRISRGEHPQVQVKSTDTIIFSASPIPGNTISVVNTIDRLMMMGAKVVY 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH D K M RP+ V +HGE LV H A GI + + Sbjct: 369 GKGEG-IHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVCHSRTAQSMGIPADNMLII 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L P I D V G+ L D G + + +R+QL+ G +++ ++ Sbjct: 428 DNGDVVELTPTTIHKGDPVKAGIELLDASRNGIVDNRVLKERQQLAEDGVITLLTVISTD 487 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D ++ + + + + D ++ Sbjct: 488 GVMGAPPRVNLRGVVTT-ADARRLSIWAEREIGWVLDNRWNQLARNTGGTAPEVDWVGVQ 546 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 I L+ L++ +PL+ + Sbjct: 547 REIEVGLQRRLRRELQVEPLIICLV 571 >gi|269836351|ref|YP_003318579.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785614|gb|ACZ37757.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 554 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 179/564 (31%), Positives = 285/564 (50%), Gaps = 19/564 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + +PLGGVGE+G N+ +Y Y +MID G FP++++ GVDL+ PDIT+ Sbjct: 1 MARPRVRVIPLGGVGEVGKNLTVYEY----RGDLVMIDAGAKFPEEEMRGVDLIVPDITY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH----VPVYASPFAIGLLEAKRVYERVSK 116 + + L I ITH HEDH G L L L +P+Y S A+ EAK V Sbjct: 57 VKERVDRLRGILITHGHEDHIGGLPYLLPQLKSRAPIPLYGSALAMAYAEAKLDEAGVLD 116 Query: 117 KIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + G +G + E V V HSIP + A+ +R+P+G VHTGD+K D LG Sbjct: 117 LAEFHVVEPGQHYQLGRYLTAEFVPVTHSIPGSFAVALRTPLGWAVHTGDFKFDPTPPLG 176 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 TD+ L +GNEG+L L+ D+ R G SE + + +Y ++ AKG V++TTF+S Sbjct: 177 PPTDEARLRELGNEGVLLLLSDAVRVERPGHTPSEAVVSETLYRVIGEAKGRVVLTTFAS 236 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG-LYPREQL 294 +++RI I A + GRK+ + G S+++ +A D+G +K + PREQ+ Sbjct: 237 NITRIDQAIRAAYRHGRKVAISGRSMEQSTRIAQDLGYMKPPPDTIIPLDVAVKLPREQV 296 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 + + TGSQGE +ALA+++ GE +KL DTVIFS+ +PGNE + ++L +GV Sbjct: 297 LFLTTGSQGEASAALARIASGEHPAIKLQRGDTVIFSATPVPGNEDTVSQTIDQLFRRGV 356 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--C 412 V+ E +HVSGH ++L+ M + +RP+ +V IHGE HL ++ELAL+ G Sbjct: 357 SVVYSAIEPTIHVSGHASRDELRFMLRLLRPRFVVPIHGEYRHLALYRELALEMGYNDAQ 416 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 V G +L D V G L D I ++ + +R +++ G + ++ Sbjct: 417 VLLPEIGNVLSFGRDSGRREQTVESGAVLVD---IIGNRNVILRQRDEIAASGVIIATMI 473 Query: 473 LDNHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 +D + P++ G+ K+ K + + Q L Sbjct: 474 VDRDSRQLIAGPDVSAQGL--DGQIDAKVLKRAEDELRRFLEK-RQKGGFSYGYLVSRTK 530 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 + L + + +P++ I+++ Sbjct: 531 NVLSRQIYRDAKIRPMILPVISEL 554 >gi|227552404|ref|ZP_03982453.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecium TX1330] gi|257888355|ref|ZP_05668008.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896755|ref|ZP_05676408.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|314940205|ref|ZP_07847378.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314941737|ref|ZP_07848616.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314947619|ref|ZP_07851028.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314950605|ref|ZP_07853685.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992528|ref|ZP_07857949.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314995311|ref|ZP_07860420.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|227178458|gb|EEI59430.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecium TX1330] gi|257824409|gb|EEV51341.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257833320|gb|EEV59741.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|313590468|gb|EFR69313.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313592988|gb|EFR71833.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313597152|gb|EFR75997.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313599509|gb|EFR78352.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313640525|gb|EFS05105.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313645860|gb|EFS10440.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 562 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 153/566 (27%), Positives = 263/566 (46%), Gaps = 14/566 (2%) Query: 1 MK-NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKFVSTIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKI 118 ++ + + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 57 YLEENIDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI T Sbjct: 117 DFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ Sbjct: 177 DYARLAEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ ++D AE+ RK+VL G +R++ A+ + ++ L ++ + Y E+LI+ Sbjct: 237 RVQQVLDAAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELII 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P V + GE L AH +LA + Sbjct: 357 KLISEN--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIY 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG IG ++ + R+ LS G V + Sbjct: 415 ITGRGDVLEYKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTIS 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P+I G Y + K + T V + + L++ I Sbjct: 475 RREKKIISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQ 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + +++R Sbjct: 534 LGRYLFEQTKRRPVILPVIMEATQRR 559 >gi|170077888|ref|YP_001734526.1| hypothetical protein SYNPCC7002_A1273 [Synechococcus sp. PCC 7002] gi|169885557|gb|ACA99270.1| conserved hypothetical protein TIGR00649 [Synechococcus sp. PCC 7002] Length = 608 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 181/570 (31%), Positives = 305/570 (53%), Gaps = 23/570 (4%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +PLGG+ EIG N ++ Y + +++D G++FP D + GV++V PD T++ Sbjct: 30 QDSIKIIPLGGLHEIGKNTCVFEY----DDEIVLLDAGLAFPTDGMHGVNIVLPDTTYLR 85 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + + +TH HEDH G + +P +Y A+ LL K VS + Sbjct: 86 ENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIYGPRLAMSLLSDKLDEAGVSDRTKLH 145 Query: 122 SFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 S D V +G F +E +R HSI ++ + I +P+G I+HTGD+K+D + G+ D Sbjct: 146 SVMPRDMVRIGKNFLVEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKVDFTPVDGEQFDF 205 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L L+ DSTNA G SE +K N+ I A+G + VTTF+SSV R+ Sbjct: 206 QRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKPNLDRIFGQAQGRLFVTTFASSVHRV 265 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIAT 299 I+++A++ RK+ ++G S+ V+S A ++G +K D+LF+ E ++++ T Sbjct: 266 SIILELAQKHNRKVAVVGRSMLNVISHARNLGYMKCLDELFIPLRQLKSMKDEDVLILTT 325 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SA+ ++S R++K+ E DTV+FS+ IPGN +A+ + +RL+ +G +VI Sbjct: 326 GSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANPIPGNTIAVVNTIDRLMMRGAKVIYG 385 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 E +HVSGH +D K M +P+ + HGE LV H + A G+ + + Sbjct: 386 KGEG-IHVSGHGAQDDHKLMLALTKPKFFIPFHGEHRMLVKHAQTAQSMGVPEENIVIID 444 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L + I + +V G+ L D I D + +R+QL+ G ++V V + Sbjct: 445 NGDIVELTENSIGVTGKVPSGIELVDRSGI--VHDSVLQERQQLAEEGVITVAVAIAQDG 502 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK---------DLKLLRE 528 N+ PEI G+ + +H+L+ + V + D ++ D +R Sbjct: 503 NLIAPPEIHLRGV-VTAANNKLLHQLIQRNVENVLEDRLAEYKEHGKRSNEDIDWTDIRL 561 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKISRQ 558 I ++L+ L ++ +PLV VF+ ++S Q Sbjct: 562 EIEASLQRLARRELQGEPLV-VFLMQVSEQ 590 >gi|69245233|ref|ZP_00603311.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Enterococcus faecium DO] gi|257880118|ref|ZP_05659771.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882350|ref|ZP_05662003.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257885547|ref|ZP_05665200.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257891209|ref|ZP_05670862.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257894021|ref|ZP_05673674.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|257899791|ref|ZP_05679444.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|258614548|ref|ZP_05712318.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium DO] gi|260560273|ref|ZP_05832449.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|293378064|ref|ZP_06624240.1| conserved hypothetical protein [Enterococcus faecium PC4.1] gi|293560633|ref|ZP_06677120.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|293570173|ref|ZP_06681251.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|294623460|ref|ZP_06702312.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|68195908|gb|EAN10342.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Enterococcus faecium DO] gi|257814346|gb|EEV43104.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257818008|gb|EEV45336.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257821403|gb|EEV48533.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257827569|gb|EEV54195.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257830400|gb|EEV57007.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|257837703|gb|EEV62777.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|260073618|gb|EEW61944.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|291587322|gb|EFF19208.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291597133|gb|EFF28332.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291605384|gb|EFF34831.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|292643319|gb|EFF61453.1| conserved hypothetical protein [Enterococcus faecium PC4.1] Length = 559 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 151/561 (26%), Positives = 261/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 59 IDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI TD L Sbjct: 119 DEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 +D AE+ RK+VL G +R++ A+ + ++ L ++ + Y E+LI++ TG Sbjct: 239 LDAAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISE 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P V + GE L AH +LA + G Sbjct: 359 N--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG IG ++ + R+ LS G V + Sbjct: 417 DVLEYKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + K + T V + + L++ I L L Sbjct: 477 IISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + +++R Sbjct: 536 FEQTKRRPVILPVIMEATQRR 556 >gi|254422247|ref|ZP_05035965.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196189736|gb|EDX84700.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 622 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 176/561 (31%), Positives = 297/561 (52%), Gaps = 19/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG + +++D G+SFP + + GV++V PDIT++ + + Sbjct: 31 LKIIPLGGLHEIGKNTCVFEYG----DEIVLLDAGLSFPTEGMHGVNIVLPDITYLKENQ 86 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +TH HEDH G + ++P ++ A+ LL+ K V + Sbjct: 87 HKIKGMIVTHGHEDHIGGIAFHLKQFNIPVIHGPRLAMALLQGKLEEAGVLNSTELHTVG 146 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V G FS + +R HS+ ++ + I++PVG I+H+GD+K+D + G+ D + Sbjct: 147 PRDTVQFGKHFSAQYIRNTHSMADSFTMAIKTPVGTIIHSGDFKVDHTPVDGEFFDFQKI 206 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G EG+L L+ DSTNA G SE+ + N+ +AKG + VTTF+SSV R+ + Sbjct: 207 AEYGEEGVLCLISDSTNAEIPGNTPSERSVFPNLDREFSDAKGRLFVTTFASSVHRVSML 266 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A++ R + ++G S+ V+S A ++G IK D LF P +Q +++ TGSQ Sbjct: 267 LELAQKHKRSVFVVGRSMLNVISHARNLGYIKCPDSLFKPLNQLKQCPNDQTMILTTGSQ 326 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL +++ R +++ + DTVIFSS IPGN +++ ++L++QG RVI + Sbjct: 327 GEPMAALTRIANRSHRQIRIEQGDTVIFSSNPIPGNTISVVGTIDKLMQQGARVIYGKGK 386 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH Y D K M RP+ + +HGE LV H E+A Q G+ + V NG Sbjct: 387 G-LHVSGHGYQEDHKLMLALTRPKFFIPVHGEHRMLVKHAEMAQQLGVEPQNIAIVNNGD 445 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++++ P+ I + +V G+ L D G + +R+QL+ G ++V+ +D + Sbjct: 446 VVKVTPENIRVDGKVTAGIELVDASRTGIVERTVLKERQQLAEDGIITVSATVDGTGKLL 505 Query: 481 GVPEIVDIGIPAYDGDGGK---IHKLLLKTVI----TTVVDLPQFR-RKDLKLLRESISS 532 G P I G+ I ++ K+V + D R R + LR I Sbjct: 506 GEPTINLRGVVTTRSQAQWESIIIPVVTKSVRTRWKEVLDDSNGERPRVNWDGLRSRIEE 565 Query: 533 ALRSLLKKVWGK-KPLVTVFI 552 R +++ K P+ + + Sbjct: 566 DTRRFVRRELPKQYPVTVLML 586 >gi|261208209|ref|ZP_05922882.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289566575|ref|ZP_06446996.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|294615817|ref|ZP_06695660.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|260077466|gb|EEW65184.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289161620|gb|EFD09499.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|291591307|gb|EFF22973.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] Length = 559 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 260/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 59 IDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI TD L Sbjct: 119 DEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 +D AE+ RK+VL G +R++ A+ + ++ L ++ + Y E+LI++ G Sbjct: 239 LDAAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISE 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P V + GE L AH +LA + G Sbjct: 359 N--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG IG ++ + R+ LS G V + Sbjct: 417 DVLEYKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + K + T V + + L++ I L L Sbjct: 477 IISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + +++R Sbjct: 536 FEQTKRRPVILPVIMEATQRR 556 >gi|186681331|ref|YP_001864527.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186463783|gb|ACC79584.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102] Length = 590 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 163/570 (28%), Positives = 294/570 (51%), Gaps = 20/570 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N L +PLGG+ EIG N L+ Y + I++D G++FP + + GV++V PD T++ Sbjct: 7 NNSALKIIPLGGLHEIGKNTCLFEY----DDEIILLDAGLAFPTEAMHGVNIVLPDTTYL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + +P +Y A+ +LE K V + Sbjct: 63 RENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTEI 122 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D + G+ D Sbjct: 123 RTVLPRDVVRIGKNFLVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGEKFD 182 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G SE+ + N+ + A G + VTTF+SSV R Sbjct: 183 LQRLAEHGEKGVLCLLSDSTNAEIPGFTPSERSVYPNLERVFSQATGRLFVTTFASSVHR 242 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD-ESFGLYPREQLIVIA 298 I I+DIA++ R + ++G S+ +++ A ++G IK + L + P E+++++ Sbjct: 243 INMILDIAKKQNRVVTIVGRSMLNLIAHARNLGYIKCEDNLLQPLHAVRNLPDEKVLILT 302 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +A+ +++ E ++K+ + DTV+FS+ IPGN +A+ + ++L+ QG +V+ Sbjct: 303 TGSQGESMAAMTRIANKEHPHIKIRQGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVVY 362 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M RP+ V HGE LV H E A GI + + Sbjct: 363 GR-DKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHAETAQSMGIPSENMIII 421 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG ++ L D I + +V G+ L D G + + +R++++ G +++ +D + Sbjct: 422 QNGDIVELTEDAIRVAGKVPSGIELVDTTSSGMVSAKVLQERQRMASEGIITIAAAIDWN 481 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV--------DLPQFRRKDLKLLRE 528 + PE G+ + + + + + + + + D L+ Sbjct: 482 GKLLAKPETHLRGVVTTV-ERSLLQTWVKQRIEEILTVRWTEFAPEQGEAADIDWGGLQG 540 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKISRQ 558 ++ L+ +++ +P VT + +I + Sbjct: 541 TLERELQRSIRRELQCQPSVT-LLMQIPDE 569 >gi|294617806|ref|ZP_06697418.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|291595917|gb|EFF27198.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] Length = 559 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 151/561 (26%), Positives = 261/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 59 IDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI TD L Sbjct: 119 DEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 +D AE+ RK+VL G +R++ A+ + ++ L ++ + Y E+LI++ TG Sbjct: 239 LDAAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYNPEELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISE 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P V + GE L AH +LA + G Sbjct: 359 N--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG IG ++ + R+ LS G V + Sbjct: 417 DVLEYKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + K + T V + + L++ I L L Sbjct: 477 IISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + +++R Sbjct: 536 FEQTKRRPVILPVIMEATQRR 556 >gi|87123280|ref|ZP_01079131.1| hypothetical protein RS9917_05455 [Synechococcus sp. RS9917] gi|86169000|gb|EAQ70256.1| hypothetical protein RS9917_05455 [Synechococcus sp. RS9917] Length = 669 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 169/565 (29%), Positives = 289/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ Sbjct: 16 KEPTLRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFL 71 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L K V+ + Sbjct: 72 RQNQKRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVTDRTTL 131 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG I+ TGD+K D + G+ D Sbjct: 132 QTVGPRDVVRVGQHFSVEFIRNTHSMADSFSLAITTPVGTIIFTGDFKFDHTPVDGEHFD 191 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G++G+L L DSTNA G C E+ + N+ M A+G V++TTF+SS+ R Sbjct: 192 LARLAHYGDKGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHMAQAEGRVIITTFASSIHR 251 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 252 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQINDVPDRETLLLM 311 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE VK+ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 312 TGSQGEPLAALSRISRGEHPQVKVKSTDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M RP+ V +HGE LV H G+ + Sbjct: 372 GKGEG-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVCHARTGHAMGVPEDNTLII 430 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L + I D V G+ L D G + +R+QL+ G +++ + Sbjct: 431 DNGDVVELTAESIRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGIVTILAAISTD 490 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 491 GAMVAPPRVNLRGVVTT-ADARKMSLWTEREISWVLENRWKQLSRNSGGKTPEVDWMGVQ 549 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 550 REVEVGLGRRMRRELQVEPLILCLV 574 >gi|254430134|ref|ZP_05043837.1| conserved hypothetical protein [Cyanobium sp. PCC 7001] gi|197624587|gb|EDY37146.1| conserved hypothetical protein [Cyanobium sp. PCC 7001] Length = 677 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 166/565 (29%), Positives = 291/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +++ Sbjct: 13 KQPALRVIPLGGLHEIGKNTCVFEYG----DDIMLVDAGLAFPSDGMHGVNVVMPDTSYL 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P ++ A+ +L K V + Sbjct: 69 KENQKRIRGMIVTHGHEDHIGGIAHHLKNFNIPVIHGPRLALSMLTGKMEEAGVMDRTIL 128 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D Sbjct: 129 QTVAPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGEHFD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L DSTNA G C E+ + + + A+G V++TTF+SS+ R Sbjct: 189 MARLAHYGEQGVLCLFSDSTNAEVPGFCPPERSVFPKLDQHIAQAEGRVIITTFASSIHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 249 VAMILELAMKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQIRDLPDRETLLLM 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 309 TGSQGEPLAALSRISRGEHPQVQVKPSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M +P+ V +HGE LVAH + + GI + Sbjct: 369 GKGEG-IHVSGHGFQEDQKLMLALTKPKFFVPVHGEHRMLVAHAKTGMSMGIPPENTLII 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L PD I + V G+ L D G + +R+QL+ G +++ + Sbjct: 428 DNGDVVELTPDSIRKGEAVKAGIELLDASRNGIVDARVLKERQQLAEDGVITLLAAISTD 487 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 488 GVMAAPPRVNLRGVVTT-ADARKLSLWAEREITWVLENRWNQLSRNTGGKAPDVDWVGVQ 546 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L+ L++ +PL+ + Sbjct: 547 REVELGLQRRLRRELQVEPLIICLV 571 >gi|260436319|ref|ZP_05790289.1| ribonuclease J [Synechococcus sp. WH 8109] gi|260414193|gb|EEX07489.1| ribonuclease J [Synechococcus sp. WH 8109] Length = 681 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 165/561 (29%), Positives = 289/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 15 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P +Y A+ +L K V + + Sbjct: 71 KRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVRDRTTLQTVG 130 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D L Sbjct: 131 PRDVVKVGQHFSVEFIRNTHSMADSFSLAISTPVGTVIFTGDFKFDHTPVDGENFDMARL 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G++G+L L DSTN+ G C E+ + N+ + NA+G V+VTTF+SS+ R+ I Sbjct: 191 AHHGDKGVLCLFSDSTNSEVPGFCPPERSVFPNLDRHIGNAEGRVIVTTFASSIHRVSMI 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + +A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 251 LGLALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLMTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE VK+ DT+IFS+ IPGN +++ + ++L+ G +V+ + Sbjct: 311 GEPLAALSRISRGEHPQVKVKTTDTIIFSASPIPGNTISVVNTIDKLMMLGAKVVYGKGQ 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVRNGK 420 +HVSGH + D K M RP+ V +HGE LV H + + NG Sbjct: 371 G-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVQHSRTGHSMGVPVDNTLIIDNGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L PD I + V G+ L D G + +R+QL+ G +++ + + Sbjct: 430 VVELTPDSIRKGNAVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILAAISTDGAMV 489 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + + + D ++ + Sbjct: 490 APPRVNLRGVVTT-ADARKMSLWVEREIKWVLENRWKQLCRNTGGKAPEVDWMGVQREVE 548 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 549 VGLGRRMRRELQVEPLILCLV 569 >gi|269123716|ref|YP_003306293.1| beta-lactamase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315042|gb|ACZ01416.1| beta-lactamase domain protein [Streptobacillus moniliformis DSM 12112] Length = 619 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 171/562 (30%), Positives = 298/562 (53%), Gaps = 13/562 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ +PLGG+ EIG N+ + Y + I+ID G++FP+D+ GVDL+ P + Sbjct: 64 ITTDKTYIIPLGGIEEIGKNITVIQY----RDEMIVIDAGLTFPEDEHLGVDLIIPSFEY 119 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKI 118 + + A+ ITH HEDH GA+ + L +P+Y ++ L AK + KK Sbjct: 120 LASNVSKVKALLITHGHEDHIGAVPYFYQRLGSGIPMYGGKLSLELALAKF-EKVTVKKP 178 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 C+ ++V +G F++E + V HSIP+ A+ +++P I+HTGD+K+D + + Sbjct: 179 KCVYISNRNEVKIGKYFTVEFISVTHSIPDCYAIRVKTPTSTILHTGDFKVDLTPVNDER 238 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D L +IG EG+ L+ DSTNA G+ SE + ++I + AKG V++ +F+S V Sbjct: 239 FDFGRLASIGEEGVDLLLSDSTNAQVPGSTPSESTVGRSIDAEVAKAKGRVILASFASHV 298 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ II IA++ GRK+ + G S+ ++ + +G +K + ++ E ++++ Sbjct: 299 HRIQQIILIAQKYGRKVAIDGRSMLKIFEICSKLGYLKIPKNMIITLEQAEKMAENKVMI 358 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG+QGEP S L++++ G +++ L D VI S IPGNE A N+L+++ V Sbjct: 359 ICTGTQGEPLSVLSRIANGTHKSISLRANDRVIISGSPIPGNEKAAYKNINQLLKKEASV 418 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 I E +HVSGH + K M I+P+ + +HGE + L HKELA++ + Sbjct: 419 IFEKVMG-IHVSGHGCQEEQKLMINLIKPKYFMPVHGEYVMLKKHKELAMEVGMPEENII 477 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 NG L L P+ + + +V G G +G + + +R+ L+ G L+++V + Sbjct: 478 LAENGFKLELTPNSFKTVGKVPSGAVYIYGDSVGNVREHILRERQILADNGVLAISVAQN 537 Query: 475 NHYNIFGVPEIVDIGIPAYDGD-GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + G P I G D +I + + + V + +V L Q + +D++ ++ I++ Sbjct: 538 SELKFVGDPIIFSKGFLYKKDDITSQITESMKEVVKSKLVFLEQKQEQDIEKIKTGITNT 597 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L + GK P V V + ++ Sbjct: 598 LNNFFNDNIGKVPTVIVTVVRV 619 >gi|81300655|ref|YP_400863.1| hypothetical protein Synpcc7942_1846 [Synechococcus elongatus PCC 7942] gi|81169536|gb|ABB57876.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 609 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 173/563 (30%), Positives = 294/563 (52%), Gaps = 20/563 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGG+ EIG N +Y G + +++D G++FP D + GV++V PD+T++ + Sbjct: 21 DRLRIIPLGGLHEIGKNTCIYEVG----DEILLVDAGLAFPTDGMHGVNVVLPDMTYLRE 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCIS 122 + + A+ +TH HEDH G + L +P+ Y A+ LL K V + + Sbjct: 77 NQHRIKAMVVTHGHEDHIGGIPFHLRQLDIPIIYGPRLAMALLAGKLEEAGVVGRANVKT 136 Query: 123 FQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q + V +G F +E +R HSI ++ L IR+P+G ++HTGD+K D + G+ D Sbjct: 137 VQPREVVRIGQNFLVEFIRNTHSIADSFTLAIRTPLGVVIHTGDFKFDHTPVDGETFDIQ 196 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G+L L+ DSTNA G SE+ + N+ A+G ++VTTF+SSV R+ Sbjct: 197 RLADYGEQGVLCLVSDSTNAELPGFTPSERSVFPNLDRAFSQAQGRLIVTTFASSVHRVN 256 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 I+++A++ GRK+ +LG S+ V++ A ++G I D LFL + +P ++++ TG Sbjct: 257 MILELAKKHGRKVTVLGRSMLNVIAHARNLGYIHCSDDLFLPLKELRDHPDRDVLILTTG 316 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++R E VK+ + DTVIFS+ IPGN +++ + ++L+ QG V+ Sbjct: 317 SQGEPLAALTRIARQEHPQVKIRQGDTVIFSANPIPGNTISVVNTIDQLMMQGAHVVYGK 376 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH D K M +P+ V +HGE LV H + A G+ + + N Sbjct: 377 G-AGIHVSGHGCQEDQKLMIALTKPKFFVPVHGEHRMLVQHCKTAQSMGVPPEHMIVIDN 435 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + L P+ I + D V G+ L D G + +R+QL+ G +S++ L+++ Sbjct: 436 GDTVELTPESIGLGDRVTAGIELVDTSRTGLVDGKALKERQQLAEDGLVSLSALVNSQGQ 495 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL---------PQFRRKDLKLLRES 529 + P + G+ D ++ K V + + D L+ Sbjct: 496 LVDAPTVHLRGV-VTSADPRRVSVWAQKEVEMALDNRWADYCRRLPSGELDVDWVGLQAE 554 Query: 530 ISSALRSLLKKVWGKKPLVTVFI 552 + ++ LK+ P++ + Sbjct: 555 VEVGMQRRLKRELQCVPMILCTL 577 >gi|33864604|ref|NP_896163.1| hypothetical protein SYNW0068 [Synechococcus sp. WH 8102] gi|33632127|emb|CAE06583.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 678 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 169/561 (30%), Positives = 290/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 15 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P +Y A+ +L K VS + + Sbjct: 71 KRIRGMIVTHGHEDHIGGISHHLKHFNIPVIYGPRLALSMLTGKMEEAGVSDRTTLQTVS 130 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I++PVG I+ TGD+K D + G+ D L Sbjct: 131 PRDVVKVGQHFSVEFIRNTHSMADSYSLAIKTPVGTIIFTGDFKFDHTPVDGEHFDMARL 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G EG+L L DSTNA G C E+ + N+ M A+G V++TTF+SS+ R+ I Sbjct: 191 AHHGEEGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHMAAAEGRVIITTFASSIHRVSMI 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 251 LELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLMTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + ++L+ G +V+ E Sbjct: 311 GEPLAALSRISRGEHPQVRVKTTDTIIFSASPIPGNTISVVNTIDKLMMLGAKVVYGKGE 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + G+ + NG Sbjct: 371 G-IHVSGHGFQEDQKLMLALTKPKFFVPVHGEHRMLVQHSKTGHAMGVPENNTLIIDNGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L D I D V G+ L D G + +R+QL+ G +++ + + Sbjct: 430 VVELTSDSIRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILAAISTDGAMV 489 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + V + + + D ++ + Sbjct: 490 APPRVNLRGVVTT-ADARKMSLWTEREVTWVLENKWKQLCRNTGGKAPEVDWMGVQREVE 548 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 549 VGLGRRMRRELQVEPLILCLV 569 >gi|73662799|ref|YP_301580.1| hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642452|sp|Q49X63|RNJ2_STAS1 RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|72495314|dbj|BAE18635.1| putative hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 557 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 154/558 (27%), Positives = 279/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+ + +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKNIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ V+KK+ Sbjct: 63 IENKEKLKGIFLTHGHEHAIGAVTYVLEQVDAPVYGSKLTIALIKENMKARNVNKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G IV+TG++K D D Sbjct: 123 TVNNESVMRFKGVNVTFFNTTHSIPDSLGICIHTSYGAIVYTGEFKFDQSLHGHYAPDLK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG G+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 KMTEIGEAGVFALISDSTEAEKPGYNTPENVIESHMYDAFTKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 ++++A+++ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNLAQRLNRKVSFLGRSLESSFNIARKMGYFDISKDLLIPINEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + D+V + A EV +G+ N LV G +I Sbjct: 303 MQGEPVEALSQMAQKKHKIMNIEPGDSVFLTITASANMEVIVGNTLNELVRAGAEIIPNS 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H S H +LK M ++P+ + ++GE ++H +LA + G+ + V Sbjct: 363 --KKIHASSHGCMEELKMMINIMKPEYFIPVNGEFKMQISHAKLANEAGVQPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVVNYDGEEMILNEKVNSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + + + V V Q +R + +++S+ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEALLNEAEEKVREIVELGLQEKRIEWSEIKQSMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFENTKRRPMIIPVISEI 557 >gi|332708813|ref|ZP_08428784.1| hypothetical protein LYNGBM3L_32480 [Lyngbya majuscula 3L] gi|332352355|gb|EGJ31924.1| hypothetical protein LYNGBM3L_32480 [Lyngbya majuscula 3L] Length = 586 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 174/560 (31%), Positives = 295/560 (52%), Gaps = 22/560 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 L +PLGG+ EIG N ++ + + + +++D G+ FP D++ G+++V PD+T++ Sbjct: 6 SKPALKIIPLGGLHEIGKNTCVFEF----NDEILLLDAGIGFPNDEMHGINIVLPDMTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + +P +Y A+ LL+ K V+ Sbjct: 62 RENRHKIKGMIVTHGHEDHIGGIPYHLKQFDIPVIYGPRLAMALLQGKLEEAGVADHTEL 121 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V +G+ F +E +R HSI ++ + I +PVG I+HTGD+K+D + G+ D Sbjct: 122 KPVMPRETVHIGSSFLVEFIRNTHSIADSFTIAIHTPVGVIIHTGDFKVDHTPVDGEFFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L G +G+L LM DSTNA G SE+ + N+ + A G VLVTTF+SSV R Sbjct: 182 FQTLAEHGEKGVLCLMSDSTNAEVPGHTPSERSVYPNLERAIAQAPGRVLVTTFASSVHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I ++DIA++ RK+ ++G S+ V++ A +G IK D LF ++ E+++++ Sbjct: 242 ISIVLDIAQKQNRKVAIVGRSMLNVIAHARSLGYIKCPDNLFEPLKAIKNIAPEKILILT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +A+ ++S+GE R +++ DTV+FS+ IPGN +A+ + +RL++ G V+ Sbjct: 302 TGSQGEPLAAMTRISKGEHREIQIQAGDTVVFSANPIPGNTIAVVNTIDRLMKLGANVVY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPV 416 +HVSGH D K M RP+ + +HGE LV H +A + Sbjct: 362 GRKHG-IHVSGHGAQEDHKLMLALTRPKFFMPVHGEHRMLVKHALMAHSMGIPVENTVIT 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L D I I V G+ L D I D + +R+QL+ G ++V + Sbjct: 421 DNGDVVELSEDSISITGNVPSGIELVDRTGI--VHDNVMKERQQLAGDGVVTVAAAISWD 478 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + PEI G+ + + + +L++K + T+ D + D + L+ Sbjct: 479 GKLLAKPEIHLRGVVSPL-ETSLLQQLVIKRIERTLSDRWSDFDKSLTGKPTEIDWEGLQ 537 Query: 528 ESISSALRSLLKKVWGKKPL 547 + I + L+ L ++ +PL Sbjct: 538 KQIQADLQRLARRELRSRPL 557 >gi|226356971|ref|YP_002786711.1| beta-lactamase-like protein [Deinococcus deserti VCD115] gi|226318961|gb|ACO46957.1| putative beta-lactamase-like protein [Deinococcus deserti VCD115] Length = 558 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 176/553 (31%), Positives = 295/553 (53%), Gaps = 18/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG N+ +Y YG + +++D G++FP G+DL+ P I ++ + Sbjct: 18 LEVMPLGGMGEIGKNITVYRYG----DEIMVVDGGLAFPDSYQVGIDLIVPRIDYLQQNA 73 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 + + +TH HEDH G L + L VPVY +P +GL+ K + I Sbjct: 74 ELIKGWILTHGHEDHIGGLPYILPRLPRVPVYGAPLTLGLVREKLAEFGLKDGDIDLREA 133 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 KV +G F +E +R+ HSIP+ ++ +PVG ++HTGD+KLD++ G ++D Sbjct: 134 DTNAKVQIGTHFGVEFIRMTHSIPDNTGYILTTPVGQVLHTGDFKLDEEPSDGQLSDLGR 193 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + G EG+L L+ DSTNA R G SE + +N+ ++ + KG V +TTF+S+V RI++ Sbjct: 194 IEQAGKEGVLLLISDSTNAERPGRTASEAEVARNLESLIASCKGRVFMTTFASNVHRIQN 253 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +I+IA + R++V+ G S+ + V+ +G ++ + FL+++ G +Q++ + TGSQ Sbjct: 254 VINIAHRQSRRVVMEGRSMLKYAQVSQSLGYMELPEPFLTNDEVGTLQDQQVLYVCTGSQ 313 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P S L++L+ G + L D+VI SS IPGNE A+ + NRL E GV V Sbjct: 314 GQPMSVLSRLAFGNHAKIALRRGDSVILSSNPIPGNEEAVNLVINRLYELGVDVYY-PPT 372 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH +L + RP+ + HGEP H + H +LA RNG Sbjct: 373 YRVHASGHGSQEELATVLNLARPKFFLPWHGEPRHQINHAKLAQTLPRPPKRTLIARNGD 432 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL PD ++ V G DG +G +D + R +S G + + +L ++ Sbjct: 433 VVRLGPDEFKVTGTVPAGAVYVDGLGVGDVSDDVLLDRVNMSQEGLIIMTAVLHPTPHV- 491 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 EIV G + + + + + + V + +++ L+ +R+ + A+R ++K Sbjct: 492 ---EIVSRGFVRPNRE---LDAQIRRVALEAVETGMREKKR-LEDVRDDMYGAVRRFVRK 544 Query: 541 VWGKKPLVTVFIN 553 V G+ P++ I Sbjct: 545 VTGRNPVLIPMIV 557 >gi|4104709|gb|AAD02119.1| unknown [Streptomyces toyocaensis] Length = 528 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 160/538 (29%), Positives = 277/538 (51%), Gaps = 17/538 (3%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M ++ + K +++DCGV FP++ PGVD++ PD T I +++A+ +TH HEDH Sbjct: 1 MTVFEHA----GKLLIVDCGVLFPEETQPGVDVILPDFTSIRDRLDDVVAVVLTHGHEDH 56 Query: 81 YGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 G + L +PV S + LEAK + + + + GD+ +G F E V Sbjct: 57 IGGVPYLLRERRDIPVVGSKLTLAFLEAKLKEHGIRPRTVRV--REGDRRGLGPFDCEFV 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 VNHSIP+++A+ IR+ G ++HTGD+K+D + +TD + +G EG+ + DST Sbjct: 115 AVNHSIPDSLAVAIRTRAGMVLHTGDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDST 174 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 NA G SE+ + I +M+ A V+V++F+S V RI+ ++D A Q GRK+ +G Sbjct: 175 NAEVPGFTTSERELNPAIEQVMRTAPRRVIVSSFASHVHRIQQVLDAAHQHGRKVAFVGR 234 Query: 260 SLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 S+ R + +A D+G +K L +S + P ++ ++ TGSQGEP +AL++++ + Sbjct: 235 SMVRNMGIARDLGYLKVPSGLVVSTKELEKLPDHKITLVCTGSQGEPMAALSRMANRDHM 294 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 +++ + DTV+ +S IPGNE AI + N L G V+ + VHVSGH +L Sbjct: 295 -IRIGKGDTVLLASSLIPGNENAIYRVINGLTRWGAHVVHKG-NAKVHVSGHASAGELVY 352 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFPDPIEIIDEVV 436 Y ++P+ ++ +HGE HL A+ +LA++ G+ V + ++ L I +V Sbjct: 353 CYNIVKPRNVMPVHGEWRHLRANGDLAIRTGVDPERVVIAEDSVIVDLVDGRASITGKVP 412 Query: 437 HGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDG 495 G DG +G + + R L+ G ++V ++D + P+ + G D Sbjct: 413 AGNVYVDGMEVGGATEASLKDRLTLAAEGVVTVVAIVDADTGALAEAPDFLARGFVHDDA 472 Query: 496 DGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 + + T+ + D L + I+ A+ + + + +KPL+ I Sbjct: 473 TFEPVVP----VIEKTLATAAEEGVGDAHQLEQLIARAVANWAFRTYRRKPLIIPVII 526 >gi|319898897|ref|YP_004158990.1| hypothetical protein BARCL_0731 [Bartonella clarridgeiae 73] gi|319402861|emb|CBI76412.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 558 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 257/554 (46%), Positives = 391/554 (70%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ELVFLPLGGVGEIGMN+A YG+G R+W+++D GVSF +LPGVDL+ PDI F+ Sbjct: 5 KKNELVFLPLGGVGEIGMNLAAYGFGPKDCREWLLVDMGVSFAGPELPGVDLILPDIRFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ER N+ + +THAHEDHYGA+ DLW L +P+Y + F GLLE+KR + +IP Sbjct: 65 ENERHNICGLILTHAHEDHYGAVLDLWPKLKIPLYCTRFTAGLLESKRQSDSELHEIPVN 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 FQ+GD VG+FSIE++ VNHSIPE ++L I + +GN++HTGDWK+D LG VT++ Sbjct: 125 IFQSGDCFQVGSFSIEAIAVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGAVTNEK 184 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+G++G+LAL+CDSTNA+++G SEK +++++ +I+ AKG V + TF+S++ RIR Sbjct: 185 RFRALGDKGVLALLCDSTNALQDGMSPSEKQVQESLSEIILQAKGRVAIATFASNIGRIR 244 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 SI+ A +GR+++L+G SLKR V VA ++G + F+++E +G R+ ++++ TGS Sbjct: 245 SIVLAAISVGRQVLLVGRSLKRSVMVAQELGYMDGLAPFITEEDYGHTLRKDIVLVVTGS 304 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPR+ALA+LSR E++N+ L+ DTVI+SSR IPGNE AI I+NR ++QG+ VI Sbjct: 305 QGEPRAALAKLSRNEIKNIVLSPGDTVIYSSRNIPGNEKAIIDIQNRFIDQGINVITNR- 363 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP ++L +MY W +PQ+LV +HGE +HL A LA Q GI V ++NG + Sbjct: 364 DALVHVSGHPRRSELLQMYDWTKPQILVPVHGEAVHLTAQSTLAHQVGIKTVARIKNGDI 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 RL P+P E+ D+V+ G KDGFL+G +LGI +R +LS+VGH++V++ +++ +++ Sbjct: 424 FRLAPEPAEVTDQVLVGRIYKDGFLLGDEDELGIRERCKLSYVGHVAVSLHMNSKHDLID 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 ++ G+P +G G + +LL + + +P+ +RKD +L+R++ A+R+ + K+ Sbjct: 484 DIGLITCGLPKSNGAGELLEDILLNVIENAINGIPRIKRKDNELVRKAARRAVRASVNKI 543 Query: 542 WGKKPLVTVFINKI 555 WGKKP+ VF++++ Sbjct: 544 WGKKPICVVFLHQL 557 >gi|293552924|ref|ZP_06673579.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|291602900|gb|EFF33097.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] Length = 559 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 261/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + G ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIIPLGGVRENGKNMYVAEVG----EDIFILDCGLKYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ + I L + E Sbjct: 59 IDRVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + R H+IP+++ + +++ G+IV+TGD+K D AI TD L Sbjct: 119 DEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ +S NA SE I ++D +K +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 +D AE+ RK++L G +R++ A+ + ++ L ++ + Y E+LI++ TG Sbjct: 239 LDAAEKAQRKVILTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G RNVK+ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISE 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P V + GE L AH +LA + G Sbjct: 359 N--MRVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG IG ++ + R+ LS G V + Sbjct: 417 DVLEYKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P+I G Y + K + T V + + L++ I L L Sbjct: 477 IISKPQITSRGF-VYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + +++R Sbjct: 536 FEQTKRRPVILPVIMEATQRR 556 >gi|315658435|ref|ZP_07911307.1| ribonuclease [Staphylococcus lugdunensis M23590] gi|315496764|gb|EFU85087.1| ribonuclease [Staphylococcus lugdunensis M23590] Length = 557 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 157/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + ++D G+ FP+D++ GVD+V PDIT++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFILDAGLMFPEDEMLGVDIVIPDITYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + L VPVY S + L++ + KK+ Sbjct: 63 LENKARLKGIFLTHGHEHAIGAVSYILEQLDVPVYGSKLTLALVKENMKARNIKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +I HSIP+++ + I + G IV+TG++K D D Sbjct: 123 TVNHDSVMKFKNVNITFFNTTHSIPDSLGICIHTSYGAIVYTGEFKFDQSLQGNYAPDLK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG G+ AL+ DST A + G E I+ +IYD AKG ++V+ ++S+ RI+ Sbjct: 183 RMSEIGENGVFALISDSTEAEKPGYNTPENVIETHIYDAFAKAKGRIIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++ A ++ RK+ LG SL+ ++A +G L + + YP+ ++++IA+G Sbjct: 243 QVLNTASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPIDEVENYPKNEVVIIASG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +GEP AL+Q++R + + + + + D+V + A EV IG+ N LV G ++ Sbjct: 303 MEGEPIEALSQMARNKHKIMNIQKGDSVYLAITASANMEVIIGNTLNELVRAGAHIV--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMLNIMKPEYFIPVQGEFKMQIAHAKLANETGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD H Sbjct: 421 GDVMHYDGKDMTLSEKVTSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKHR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|78183650|ref|YP_376084.1| hypothetical protein Syncc9902_0066 [Synechococcus sp. CC9902] gi|78167944|gb|ABB25041.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 690 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 164/561 (29%), Positives = 289/561 (51%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ + + Sbjct: 15 LRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFLRENQ 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K + + +TH HEDH G + ++P ++ A+ +L K V+ + + Sbjct: 71 KRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIHGPRLALSMLTGKMDEAGVTDRTTLKTVA 130 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D L Sbjct: 131 PRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGEHFDMARL 190 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L DSTNA G C E+ + N+ + NA+G V+VTTF+SS+ R+ I Sbjct: 191 AHYGEKGVLCLFSDSTNAEVPGFCPPERSVFPNLDRHIANAQGRVIVTTFASSIHRVSMI 250 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ TGSQ Sbjct: 251 LELAMKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLMTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRG+ VK+ DT+IFS+ IPGN +++ + ++L+ G +V+ E Sbjct: 311 GEPLAALSRISRGDHPQVKVKTTDTIIFSASPIPGNTISVVNTIDKLMMLGAKVVYGKGE 370 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + + + NG Sbjct: 371 G-IHVSGHGFQEDQKLMLALTKPKFFVPVHGEHRMLVQHSKTGHSMGVPVNNTLIIENGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L PD + D V G+ L D G + +R+QL+ G +++ + + Sbjct: 430 VVELTPDSLRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGVVTILSAISTDGAMV 489 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + D ++ + Sbjct: 490 APPRVNLRGVVTT-ADARKMSLWTEREITWVLENRWKQLSRNTGGNAPEVDWMGVQREVE 548 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 L +++ +PL+ + Sbjct: 549 VGLGRRMRRELQVEPLILCLV 569 >gi|119510662|ref|ZP_01629791.1| hypothetical protein N9414_23758 [Nodularia spumigena CCY9414] gi|119464713|gb|EAW45621.1| hypothetical protein N9414_23758 [Nodularia spumigena CCY9414] Length = 590 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 162/570 (28%), Positives = 289/570 (50%), Gaps = 21/570 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L +PLGG+ EIG N ++ Y + +++D G++FP + GV++V PD T++ Sbjct: 7 KSALKIIPLGGLHEIGKNTCVFEY----EDEIVLLDAGLAFPTKGMLGVNIVLPDTTYLR 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCI 121 + R + + +TH HEDH G + +P+ + A+ +LE K V + Sbjct: 63 ENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPIIHGPRLAMAMLEGKLEEAGVRDRTELR 122 Query: 122 SFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 S + D V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D + G+ D Sbjct: 123 SVKPRDVVRIGQHFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGEHFDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G G+L L+ DSTNA G SE+ + N+ A G + VTTFSSSV RI Sbjct: 183 QRLAEHGERGVLCLLSDSTNAEVPGFTPSERSVYPNLDREFGQATGRLFVTTFSSSVHRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+ +A++ R + ++G S+ +++ A ++G IK D +F + P E+++++ T Sbjct: 243 NMILQLAQKHNRVVSVVGRSMLNLIAHARNLGYIKCDDSIFHPLHAVRNMPDEKVLILTT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +A+ +++ E +K+ DTV+FS+ IPGN +A+ + ++L+ QG +V+ Sbjct: 303 GSQGETMAAMTRIANKEHSQIKIRPGDTVLFSANPIPGNTIAVVNTIDKLMIQGAKVVYG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + +HVSGH + K M RP+ V HGE LV H + A GI + + Sbjct: 363 R-DKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHSQTAQSMGIVPENMVIIE 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L D I + +V G+ L D G +D + +R+++S G +++ +D + Sbjct: 422 NGNIVELTEDSIRVAGKVASGIELVDTTSAGMVSDTVLQERQKMSEEGIVTIAAAIDWNG 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV---------DLPQFRRKDLKLLRE 528 + PE G+ + + K + + + + + D L+ Sbjct: 482 KLLAKPETHLRGVVTSV-ERSLVQKWVQQRIEEMLTVRWSEFAQIREGEKPEVDWGGLQG 540 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKISRQ 558 + L+ +++ +P VT + +I+ + Sbjct: 541 MLERELQRSIRRELQCQPTVT-LLMQIAEE 569 >gi|297566424|ref|YP_003685396.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] gi|296850873|gb|ADH63888.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] Length = 578 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 172/557 (30%), Positives = 286/557 (51%), Gaps = 17/557 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E + +PLGG+GEIG NM + Y + +++D G++FP++ +PGVDL+ P I +++ Sbjct: 33 SEHVEIIPLGGMGEIGKNMFAFRY----HDEILVVDGGLAFPEEHMPGVDLLIPRIDYLL 88 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-KKIPC 120 + ++ + +TH HEDH GAL + L VPVY + +GL++ K + Sbjct: 89 EHQELIKGWVLTHGHEDHIGALPFIMPQLPRVPVYGAKLTLGLVKGKLEEFGLRAGDFNF 148 Query: 121 ISFQAGDKVDVGAFSI-ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ +G F + + R+ HSIP+ ++I +P+G IVHTGD+KLD I G + Sbjct: 149 KEVSPDERIQIGRFFVVDLFRMTHSIPDNSGMIIHTPIGKIVHTGDFKLDPTPIDGKTSH 208 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G EG+L L+ DSTNA R G SE I K + I+ AKG + VTTF+S + R Sbjct: 209 LAKIAQAGAEGVLLLIADSTNAERPGITPSESEIAKGLDAIIGKAKGRIFVTTFASHIHR 268 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+S+I AE+ GRK+ + G S+ + +A ++G + + + P EQ++V++T Sbjct: 269 IQSVITAAEKYGRKVAMEGRSMLKFSRIAHELGYMSVRDRIYTLDEINHLPDEQVLVLST 328 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQG+P +AL++L+ G L DTVI SS IPGNE A+ + N+L G V Sbjct: 329 GSQGQPEAALSRLAFGGHAKFALKPGDTVILSSSPIPGNEEAVNRVINQLYRLGTYVYY- 387 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH +LK + P+ + HGE K LA G V Sbjct: 388 PPTYRVHASGHASQEELKIILNLTNPKFFLPWHGENRQQTNFKWLAESMGHPPQQTLIVE 447 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++L D I + +V G+ DG +G D + R+ ++ G + + L+ Sbjct: 448 NGARVKLTADSISVDGQVPAGVLYVDGLGVGDITDEILEDRQHMAAEGVVVIAALVSREA 507 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +IV G G ++ + V + + +++ L+++R+ I ++ Sbjct: 508 PTV---QIVSKGFV---KAGERLLSEVRNLVFEAIHTGVREKKR-LEVIRDDIYYPVKKF 560 Query: 538 LKKVWGKKPLVTVFINK 554 L+K G+ P++ + + Sbjct: 561 LRKATGRDPVIIPMVIE 577 >gi|298491686|ref|YP_003721863.1| RNA-metabolising metallo-beta-lactamase ['Nostoc azollae' 0708] gi|298233604|gb|ADI64740.1| RNA-metabolising metallo-beta-lactamase ['Nostoc azollae' 0708] Length = 591 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 164/574 (28%), Positives = 292/574 (50%), Gaps = 23/574 (4%) Query: 1 MKNEEL----VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 M EL +PLGG+ EIG N ++ Y + I++D G++FP + + GV++V P Sbjct: 1 MAKNELDSTLKIIPLGGLHEIGKNTCVFEY----EDEIILLDAGLAFPTEAMHGVNIVLP 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 D T++ + R + + +TH HEDH G + +P +Y A+ +LE K V Sbjct: 57 DTTYLRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVR 116 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + D V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D + Sbjct: 117 DHTELRTVMPRDIVRIGKAFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVD 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ D L G +G+L L+ DSTN+ G SE+ + N+ + A G + VTTF+ Sbjct: 177 GEKFDLQRLAEHGEKGVLCLLSDSTNSEVPGFTPSERSVFPNLDRVFSQATGRLFVTTFA 236 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 SSV RI I+ +A++ R + ++G S+ +++ A ++G IK +D LF + P E Sbjct: 237 SSVHRINMILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLFQPLHTVRGMPDEN 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ TGSQGE +A+ +++ E ++K+ E DTV+FS+ IPGN +A+ + ++L+ QG Sbjct: 297 VLILTTGSQGETMAAMTRIANKEHPHIKIWEGDTVVFSANPIPGNTIAVVNTIDKLMMQG 356 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 +V+ + +HVSGH + K M RP+ V HGE LV H E A GI Sbjct: 357 AKVVYGR-DKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHAETAQSMGIPAE 415 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + ++NG ++ L + I + +V G+ L D G + + +R++++ G +++ Sbjct: 416 NMIIIQNGDVIELTEESIRVAGKVSSGIELVDTTSSGMVSAKVLQERQRMASEGLVTIAA 475 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-------DLPQFRRKDLK 524 +D + + PEI G+ D + K + + + + + D Sbjct: 476 AIDWNGKLLAKPEIHMQGV-VTSIDRALLLKWVQQRIEEILTVRWSEFVTGNEANDIDWG 534 Query: 525 LLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 L+ + L+ L++ +P + +I + Sbjct: 535 GLQVMLEKELQRSLRRELQCQP-CLTLLMQIPEE 567 >gi|149204772|ref|ZP_01881735.1| beta-lactamase-like protein [Roseovarius sp. TM1035] gi|149141741|gb|EDM29794.1| beta-lactamase-like protein [Roseovarius sp. TM1035] Length = 537 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 184/538 (34%), Positives = 291/538 (54%), Gaps = 4/538 (0%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 MN +YGYG P + I++D GV+FP D PGVDL+ PDI+++ + L AIFITHAH Sbjct: 1 MNAYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDISWLEARKGQLEAIFITHAH 60 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 EDH GA+ ++ L P++A F + K +K I+ V G F++ Sbjct: 61 EDHVGAVAHYYARLGAPIHARAFTANIARRKMQEHGNPEKAVHIASTWPATVKAGPFTVG 120 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V ++HSIPE+ LVI S G IVHTGD+K+D + ++G+ D+D ++ G+ AL+CD Sbjct: 121 FVPISHSIPESSGLVIDSAGGRIVHTGDFKIDVNPVVGEPFDRDLWASLSEPGVKALVCD 180 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STN SE + I D++ +KG + TTF+S+V+R++S+ + + GR + L+ Sbjct: 181 STNVFSHHEGRSESTVGGPITDLVAASKGLFVCTTFASNVARVKSLAEAGVRAGRSVCLM 240 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 G +++R++ A + G++ +S E G PR+ L++I TGSQGE R+A AQL+ G+ Sbjct: 241 GRAMQRMIEAAQETGVLTGFPKTISPEEAGNVPRDSLMLIVTGSQGERRAASAQLANGKY 300 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + L E DT +FSS+ IPGNE + I N+ E GV VI + HVSGH DL Sbjct: 301 NGITLKEGDTFLFSSKTIPGNERGVIRIINQFSEMGVDVIEG--DDRYHVSGHANRPDLD 358 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 M++ I+PQ+++ +HGE HL H +LA + V NG M+ L + ++ + + Sbjct: 359 EMHKLIKPQMVIPMHGEHRHLREHVKLANANRLKGV-LAVNGMMIDLSGNAPKVAEYIET 417 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 G DG + D + R +++ GH+ VNV+LD G P + +G+ Sbjct: 418 GRTYLDGSVQVGAMDGVVRDRIRMALNGHVMVNVILDEEDEPLGDPWVEIMGLAETGRSN 477 Query: 498 GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + +L + + + + L E + R + GK+P VTV I+++ Sbjct: 478 APLVDVLEEDLSQFMGRAGAKMLTNDDKLEEGLRRTARQSTQTEIGKRPEVTVVISRL 535 >gi|254821242|ref|ZP_05226243.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium intracellulare ATCC 13950] Length = 558 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 288/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVMFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH G + L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGGIPFLLKLRPDIPVVGSRFTLALVAAKCREHRL--KPVFVEVA 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G K G F + VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGQKSTHGVFECQYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNAEHPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + + P E++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDVIDIGAAEMMPPERVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D V+ +S IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y IRP+ ++ +HG L A+ +LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGIRPRHVMPVHGTWRMLRANSKLAARTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGKAAIAGAVPVGKMFVDGLINGDVGDITLGERLILS-SGFVAVTVVVARGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ G + K + ++ V + L D + + + + + + Sbjct: 488 VPPQLHSRGFS----EDPKALEPAVRRVEAELEALAAENITDPSRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|294790514|ref|ZP_06755672.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304] gi|294458411|gb|EFG26764.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304] Length = 612 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 166/562 (29%), Positives = 284/562 (50%), Gaps = 17/562 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + +PLGG+GEIG NM + Y + ++IDCGV FP+++ PGVDL+ PD ++I Sbjct: 57 KGSMRIVPLGGLGEIGRNMNVIEY----NGHILLIDCGVLFPEEEQPGVDLILPDFSYIR 112 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+ +TH HEDH GA+ L +P+ S + +EAK + Sbjct: 113 SRLDKVEALVLTHGHEDHIGAVPYLLRERPDIPLIGSKLTLAFVEAKCREHHIDP--IMN 170 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q DK+ VG F++E + V HSIP+ +A+ +++P G+I+ TGD KLD + +TD Sbjct: 171 PVQGRDKMKVGPFNLEFITVTHSIPDALAVSVKTPAGHIIDTGDMKLDQLPLDHKITDLR 230 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +G +G+ LM DSTNA G E I + AK ++V +FSS V R++ Sbjct: 231 EFARLGEQGVDLLMADSTNAEVPGFVKPETTIGPALDKAFAEAKRKIIVASFSSHVHRVQ 290 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 ++D A + GRK+V +G S+ R + +A D+G + + + + ++L+ + TG Sbjct: 291 QVVDAAHKYGRKVVFVGRSMVRNMGIAADLGYLHLPENTVVDLKEARDIQDDKLVYMCTG 350 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++ G +++ + E DTVI +S IPGNE + + N+L G RV+ Sbjct: 351 SQGEPMAALGRIADGNHQDITIHEFDTVILASSLIPGNEHEVYKVINKLARLGARVV-NR 409 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH +L Y ++P+ + IHGE HL+A+ +A++ G+ V + Sbjct: 410 DNAAIHVSGHSNEGELLYFYNIVQPKAAMPIHGENRHLIANGLIAVKTGVDPANVVLAED 469 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG-HLSVNVLLDNHY 477 G ++ L+ I+ V G DG +G+ + + KRR LS G S V+ + Sbjct: 470 GDVVDLYHGQAAIVGSVPCGYVYVDGTSVGEITEDELEKRRILSEEGFVSSFVVVDSSKN 529 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I + + ++ + + KD L++ + L S Sbjct: 530 EVVSGPKI----FLNAVAEAESDFAEVQVQIVRDLENAMLEGTKDSYQLQQRMRRTLGSW 585 Query: 538 LKKVW-GKKPLVTVFINKISRQ 558 + + ++P++ + ++ Sbjct: 586 IGRKLRRRRPMIVPVVADLATD 607 >gi|325568627|ref|ZP_08144920.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325157665|gb|EGC69821.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 560 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 151/561 (26%), Positives = 263/561 (46%), Gaps = 13/561 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + +PLGGV E G NM + G ++DCGV +P+++L G+D V PD T++ + Sbjct: 2 ETIKIIPLGGVRENGKNMYIAEVG----EDIFVLDCGVRYPENELLGIDTVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 + +F+TH H D GAL + VPV+ + I L + +K+ Sbjct: 58 NADRVAGVFLTHGHADAIGALPYFLENIQVPVFGTELTIELAKLTVNKNEATKRFKDFHV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G +I R HSIP+++ + +++ GNIV+TGD+K D AI TD Sbjct: 118 IDEHSEIDFGHATISFFRTTHSIPDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ S+NA SE I+ +YD ++ +G ++V + +S++ R++ Sbjct: 178 LAEIGKEGVLALLSTSSNAENPTPIASELTIQDEVYDNIRYWEGRIIVASVASNLQRVQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATG 300 ++D A + RK+VL G R++ A+ +G +K L ++ + Y EQL+++ TG Sbjct: 238 VLDAAFRSDRKVVLTGQDFGRIIKTAMKLGKLKLPAEDLLITQKEMKKYSDEQLLILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ G R +++ E D V ++ E + ++ + G V Sbjct: 298 RMGEPIKALQKMANGSHRTLRIKEGDLVYITTTPTTAMETVVAKTEDIIYRAGGTVKQIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 VSGH PNDL+ M ++P+ + I GE L AH +LA + + + Sbjct: 358 DNFR--VSGHANPNDLQLMLNMMKPKYFIPIQGEYRQLAAHVDLAQEVGIPMKNIFITAR 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + V + +G +G ++ + R+ LS G V ++ Sbjct: 416 GDVLEYKKGDMIAAGAVPAENVMINGIGVGDIGNIVLRDRKVLSEDGIFVAVVTINRREK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G Y + + + V V + L++ I L Sbjct: 476 KIISAPQITSRGF-VYVKASRDLIRESGEIVEEIVEKHLHDEEFEWSKLKQDIRDRLSRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 L + ++P++ I + S++ Sbjct: 535 LFEQTKRRPVILPVIMESSQR 555 >gi|148238410|ref|YP_001223797.1| metallo-beta-lactamase superfamily hydrolase [Synechococcus sp. WH 7803] gi|147846949|emb|CAK22500.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Synechococcus sp. WH 7803] Length = 680 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 169/565 (29%), Positives = 291/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ Sbjct: 10 KQPCLRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVLPDTSFL 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L K V+ + Sbjct: 66 RENQKRIRGMIVTHGHEDHIGGIAHHLKHFNIPVIYGPRLALSMLTGKMDEAGVTDRTTL 125 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG I+ TGD+K D + G+ D Sbjct: 126 QTVGPRDVVKVGQHFSVEFIRNTHSMADSFSLAISTPVGTIIFTGDFKFDHTPVDGEHFD 185 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G++G+L L DSTNA G C E+ + N+ M +A+G V+VTTF+SS+ R Sbjct: 186 LARLAHHGDQGVLCLFSDSTNAEVPGFCPPERSVFANLDRHMADAEGRVIVTTFASSIHR 245 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ Sbjct: 246 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLM 305 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRG+ VK+ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 306 TGSQGEPLAALSRISRGDHPQVKVKSSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M RP+ V +HGE LV H G+ + Sbjct: 366 GKGEG-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVRHARTGHSMGVPEDNTLII 424 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L D + D V G+ L D G + +R+QL+ G +++ + Sbjct: 425 DNGDVVELTADSLRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAEDGIVTILAAISTD 484 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 485 GAMVAPPRVNLRGVVTT-ADARKMSLWTEREINWVLENRWKQLTRNTGGKAPEVDWMGVQ 543 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 544 REVEVGLSRRMRRELQVEPLILCLV 568 >gi|113954463|ref|YP_729307.1| metallo-beta-lactamase family protein [Synechococcus sp. CC9311] gi|113881814|gb|ABI46772.1| metallo-beta-lactamase family protein [Synechococcus sp. CC9311] Length = 676 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 166/565 (29%), Positives = 288/565 (50%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +F+ Sbjct: 9 KQACLRVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVMPDTSFL 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +TH HEDH G + +P +Y A+ +L K V+ + Sbjct: 65 RENQSRIRGMIVTHGHEDHIGGIAHHLKNFDIPVIYGPRLALSMLTGKMDEAGVTDRTTL 124 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D Sbjct: 125 QTVGPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGEHFD 184 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G++G+L L DSTNA G C E+ + N+ + A+G V++TTF+SS+ R Sbjct: 185 LARLAHYGDQGVLCLFSDSTNAEVPGYCPPERSVFPNLDRHIAEAEGRVIITTFASSIHR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D+LF+ + P + +++ Sbjct: 245 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDELFVPIKQINDVPDRETLLLM 304 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRG+ VK+ DT+IFS+ IPGN +++ + ++L+ G +V+ Sbjct: 305 TGSQGEPLAALSRISRGDHPQVKVKTSDTIIFSASPIPGNTISVVNTIDKLMILGAKVVY 364 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M RP+ V +HGE LV H G+ + Sbjct: 365 GKGEG-IHVSGHGFQEDQKLMLALTRPKYFVPVHGEHRMLVKHARTGHSMGVPEDNTLII 423 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L PD + D V G+ L D G + +R+QL+ G +++ + Sbjct: 424 NNGDVVELTPDSMRKGDPVKAGIELLDQSRNGIVDARVLKERQQLAVDGIVTILAAISTD 483 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + D ++ Sbjct: 484 GAMVAPPRVNLRGVVTT-ADARKMSLWTEREIKWVLENRWKQLCRHVDAGSPEVDWMGVQ 542 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ I Sbjct: 543 REVEVGLGRRMRREMQVEPLILCLI 567 >gi|158522595|ref|YP_001530465.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511421|gb|ABW68388.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 549 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 176/554 (31%), Positives = 294/554 (53%), Gaps = 10/554 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG EIG+NM + YG ID G+ FP+ + GVD+V PD+ +I ++ Sbjct: 2 LKITPLGGTREIGLNMTVIEYG----DTAFAIDAGLMFPEGYMLGVDIVLPDMDYIREKG 57 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 KN A+ +TH HEDH GA+ L ++VP++ +PF +GL+ K + + Sbjct: 58 KNFAAVVLTHGHEDHIGAIPYLLRDMNVPIFGTPFTLGLVRHKLEEAGLLANARLHTISL 117 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + + +G F ++ +RVNHS+ + + + I++PVG +VH+GD+KL A TD D Sbjct: 118 DEFLRIGPFELDFMRVNHSVVDGVGMAIKTPVGTVVHSGDFKLSQSAFPWMNTDVDKFVW 177 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G +GILAL+ DSTN ++G IS+ + + + I+ + G +V F+S++ RI+ I+D Sbjct: 178 YGGQGILALLSDSTNVEKDGRTISDMAVGETLEKIIAKSPGRAIVALFASNIVRIQQIVD 237 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 IAE+ RK++ G S++ +A D+ ++ D + ++ P ++++VI TGSQGE Sbjct: 238 IAEKHNRKVIFDGRSIETSTQIARDLDYLRLPDGIEMNIRQIDEVPDDEVVVITTGSQGE 297 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P S+LA+++ G + +K DT+I SS+ IPGNE AI I N EQG V+ E Sbjct: 298 PMSSLARMATGSNKMIKTRPGDTIILSSKFIPGNERAITSIINHFYEQGADVVYEKI-SD 356 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +HVSGH + +L M Q + P + +HGE HL+ H LA Q GI + NG ++ Sbjct: 357 IHVSGHAFREELIEMMQMVNPTYFIPVHGERRHLIHHARLAKQAGIPEENIILPDNGLVI 416 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI-FG 481 + D + G L DG +G + +R++L+ G + V ++ D I Sbjct: 417 EFDETGVRTKDHITTGRVLVDGKGVGDVGSSVLRERKELAEDGIVVVVIVFDEETGIVVH 476 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G + G I + ++ + ++ + ++ + SALR K Sbjct: 477 GPELLSRGF-VFQNLKGHILEDAQCVILEILEEVRPDMPDRVSVIETQMKSALRQYFKFT 535 Query: 542 WGKKPLVTVFINKI 555 ++P+V + ++ Sbjct: 536 IKRRPVVIPVMIEV 549 >gi|296171681|ref|ZP_06852895.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894042|gb|EFG73805.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 558 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 168/555 (30%), Positives = 285/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVMFPTHDEPGVDLILPDLRHISDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH G + L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGGIPFLLKLRPDIPVVGSKFTLALVAAKCREHRL--KPVFVEVT 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + G F E VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 ERQRSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTN+ G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNSEIPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + P EQ+++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDVIDIGAAEEMPPEQVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D V+ +S IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V+++ Sbjct: 429 VDLVAGAASIAGAVPVGKMFVDGLISGDVGDITLGERLILS-SGFVAVTVVVERGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + + V + L D + +++ + + + Sbjct: 488 VAPHLHSRGFS----EDPKALEPAGRRVEAELEALAAENITDPSRIAQAVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|56752257|ref|YP_172958.1| hydrolase [Synechococcus elongatus PCC 6301] gi|56687216|dbj|BAD80438.1| probable hydrolase [Synechococcus elongatus PCC 6301] Length = 609 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 173/563 (30%), Positives = 293/563 (52%), Gaps = 20/563 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L +PLGG+ EIG N +Y G + +++D G++FP D + GV++V PD+T++ + Sbjct: 21 DRLRIIPLGGLHEIGKNTCIYEVG----DEILLVDAGLAFPTDGMHGVNVVLPDMTYLRE 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCIS 122 + + A+ +TH HEDH G + L +P+ Y A+ LL K V + + Sbjct: 77 NQHRIKAMVVTHGHEDHIGGIPFHLRQLDIPIIYGPRLAMALLAGKLEEAGVVGRANVKT 136 Query: 123 FQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q + V +G F +E +R HSI ++ L IR+P+G ++HTGD+K D + G+ D Sbjct: 137 VQPREVVRIGQNFLVEFIRNTHSIADSFTLAIRTPLGVVIHTGDFKFDHTPVDGETFDIQ 196 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G+L L+ DSTNA G SE+ + N+ A+G ++VTTF+SSV R+ Sbjct: 197 RLADYGEQGVLCLVSDSTNAELPGFTPSERSVFPNLDRAFSQAQGRLIVTTFASSVHRVN 256 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATG 300 I+++A++ GRK+ +LG S+ V++ A ++G I D LFL + +P ++++ TG Sbjct: 257 MILELAKKHGRKVTVLGRSMLNVIAHARNLGYIHCSDDLFLPPKELRDHPDRDVLILTTG 316 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEP +AL +++R E VK+ + DTVIFS+ IPGN +++ + ++L+ QG V+ Sbjct: 317 SQGEPLAALTRIARQEHPQVKIRQGDTVIFSANPIPGNTISVVNTIDQLMMQGAHVVYGK 376 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 +HVSGH D K M +P+ V +HGE LV H + A G+ + + N Sbjct: 377 G-AGIHVSGHGCQEDQKLMIALTKPKFFVPVHGEHRMLVQHCKTAQSMGVPPEHMIVIDN 435 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + L P+ I + D V G+ L D G + +R+QL+ G +S++ L+++ Sbjct: 436 GDTVELTPESIGLGDRVTAGIELVDTSRTGLVDGKALKERQQLAEDGLVSLSALVNSQGQ 495 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL---------PQFRRKDLKLLRES 529 + P + G+ D ++ K V + + D L Sbjct: 496 LVDAPTVHLRGV-VTSADPRRVSVWAQKEVEMALDNRWADYCRRLPSGELDVDWVGLHAE 554 Query: 530 ISSALRSLLKKVWGKKPLVTVFI 552 + ++ LK+ P++ + Sbjct: 555 VEVGMQRRLKRELQCVPMILCTL 577 >gi|224476403|ref|YP_002634009.1| putative metallo-beta-lactamase superfamily hydrolase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421010|emb|CAL27824.1| putative hydrolase of the metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] Length = 557 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 153/558 (27%), Positives = 273/558 (48%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN ++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNNDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDVVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + L IF+TH HE GA+ + + PVY S + L++ ++KK+ Sbjct: 63 IENKDKLKGIFLTHGHEHAIGAVSYVLEQVDAPVYGSKLTLALVKENMKERNINKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G IV+TG++K D D Sbjct: 123 TVNDESVMRFKNVNVSFFNTTHSIPDSLGVTIHTSYGAIVYTGEFKFDQSLHGNYAPDLK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ AL+ DST A + G E I+ ++ D G ++V+ ++S+ RI+ Sbjct: 183 KMTEIGEEGVFALISDSTEAEKPGYNTPENVIESHMLDAFTKVNGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA ++ RK+ LG SL+ ++A +G L + YP+ ++++IATG Sbjct: 243 QVLNIARKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVENYPKNEVVIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL Q++R + + + + D+V + A EV IG N L G +I Sbjct: 303 MQGEPVEALNQMARQKHKIMNIEPGDSVFLAMTASANMEVIIGDTLNELARAGADIIPNS 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ + + GE +AH +LA + G+ + Sbjct: 363 --KKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLAEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVLNYDGEDMVLNEKVESGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V Q RR + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVREIVEQGLQERRIEWSEIKQNMRDKISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I+++ Sbjct: 540 LFENTKRRPMIIPIISEV 557 >gi|124021789|ref|YP_001016096.1| hydrolase of the metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9303] gi|123962075|gb|ABM76831.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9303] Length = 667 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 167/565 (29%), Positives = 296/565 (52%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG + +M+D G++FP D + GV++V PD +++ Sbjct: 19 KEPCLRVIPLGGLHEIGKNTCVFEYG----DEIMMVDAGLAFPSDGMHGVNVVMPDTSYL 74 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 75 RENQKRIRGMIVTHGHEDHIGGIPHHLKHFNIPVIYGPRLAMSMLQGKMEEAGVTDRTTI 134 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG+++ TGD+K D + G+ D Sbjct: 135 QTVSPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGSVIFTGDFKFDHTPVDGENFD 194 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L DSTNA G C E+ + + + A+G V++TTF+SS+ R Sbjct: 195 MARLAHHGEQGVLCLFSDSTNAEVPGFCPPERSVFPALDRHIAQAEGRVIITTFASSIHR 254 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 255 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQIRDMPDRETLLLM 314 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE ++V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 315 TGSQGEPLAALSRISRGEHQHVQVKNSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 374 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 E +HVSGH + D K M +P+ V +HGE L+ H + A G+ + + Sbjct: 375 GKGEG-IHVSGHGFQEDHKLMLALTKPKFFVPVHGEHRMLICHSKTAQSMGVASDNILIL 433 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG +++L D I D V G+ L D G + +R+QL+ G ++V + Sbjct: 434 DNGDVVQLSADSISKGDSVKAGIELLDASRNGIVDARVLKERQQLAEDGVVTVLAAISTD 493 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D L+ Sbjct: 494 GVMVAPPRVNLRGV-VTAADPRKMSLWTEREISWVLENRWKQFSRQTDGKAPEVDWMGLQ 552 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 553 REVEVGLGRRMRRELQVEPLLLCLV 577 >gi|87200298|ref|YP_497555.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135979|gb|ABD26721.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 550 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 212/556 (38%), Positives = 327/556 (58%), Gaps = 9/556 (1%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK+ +EL+FL LGG GEIGMN+ LY KW+M+D G++F PG+DLVF D+ Sbjct: 1 MKSAKELLFLALGGSGEIGMNVNLYC----CDGKWLMVDLGMTFADPYYPGIDLVFADLE 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 FI + +L+ I +THAHEDH GA+ L VP+YA+PF L+ K + + K++ Sbjct: 57 FIEERLDDLVGIVLTHAHEDHIGAVPYFAQDLGVPLYATPFTAKLVHEKLLEAGIEKEVE 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 D +G F + + + HSI E AL+I +P G I HTGDWKLDD+ +G Sbjct: 117 LNVIDHLDPFQLGPFGLRYIPLAHSIAEGNALLIDTPHGRIFHTGDWKLDDEPRIGTPAT 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVS 238 ++ L AIG+EG+LAL+CDSTN SE ++ + + + KG V+VTTF+S+V+ Sbjct: 177 EEELTAIGDEGVLALVCDSTNVFNPNPSGSEGAVRAGLLEAVAAQKGRRVVVTTFASNVA 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ ++AE GR++ + G SL R++ VA G +K + + PR +L+V+A Sbjct: 237 RLQTLGEVAEATGRRVCVAGRSLDRIIRVAQSCGYLKNFPETVHMDDAMDLPRGELLVLA 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QGEPR+ALA+++ + VKL + D V+FS+R IPGNE+AIG ++N LVE+GVR++ Sbjct: 297 TGGQGEPRAALARIAADQHP-VKLEKGDAVLFSTRQIPGNELAIGRVQNALVEKGVRIVT 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + + +HVSGHP +L +Y+W+RP++LV +HGE H+ +L L EGI +N Sbjct: 356 DR-QSMIHVSGHPGRPELMALYEWLRPEILVPVHGEIRHMAEQAQLGLDEGIPKAIVQKN 414 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++RL P+ + + E G + DG +I +A RR+L G ++V + + + Sbjct: 415 GDLIRLAPNGPKKLSEERAGRLVLDGDIISPADGEAVAARRKLGANGLITVALAVRLDGH 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + +I IGIP D D TV +L RR+D + E++ A+R Sbjct: 475 LVSDVDIATIGIPL-DEDMEAFMAEAKVEAAETVRNLKGDRRRDRFAVAEAVRLAVRRTG 533 Query: 539 KKVWGKKPLVTVFINK 554 ++ GKKP+V V + + Sbjct: 534 QRWSGKKPVVQVLLRE 549 >gi|113474445|ref|YP_720506.1| hypothetical protein Tery_0589 [Trichodesmium erythraeum IMS101] gi|110165493|gb|ABG50033.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 596 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 170/567 (29%), Positives = 311/567 (54%), Gaps = 21/567 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L +PLGG+ EIG N ++ Y + I++D G++FP D + GV++V PD+T++ Sbjct: 6 SSSALKIIPLGGLHEIGKNTCIFEY----DDEIIILDAGLAFPTDGMHGVNIVLPDVTYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + + +P +Y A+ LL K V + Sbjct: 62 YENRHKIKGMIVTHGHEDHIGGIPFHLKNMEIPVIYGPKLAMALLYHKLEEAGVQNRTEL 121 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V +G F IE +R HS+ ++ + I +PVG ++HTGD+K+D + G+ D Sbjct: 122 KTVCPRDIVKLGRYFIIEYIRNTHSMADSFTVAITTPVGVVIHTGDFKIDHTPVDGEKFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+ L+ DSTN+ G SEK + ++ ++ A G V++TTF+SSV R Sbjct: 182 LQKLAEYGEKGVHCLISDSTNSEVPGFTPSEKSVYPSLDRVLSEAAGRVMLTTFASSVHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 ++ ++++A++ GR + ++G S+ V++ A ++G IK +D LF+ + P E+L ++ Sbjct: 242 LQIVLELAKKHGRLVAIVGRSMLNVIAHARNLGYIKCEDSLFVPLHTVRSVPDEKLFILT 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL ++++GE R +K+ + DTVIFS+ IPGN +A+ + ++L+ G V+ Sbjct: 302 TGSQGEPMSALTRIAKGEHRQIKIRQGDTVIFSANPIPGNTIAVVNTIDKLMMLGANVVY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M RP+ + HGE LV H + A G+ + + Sbjct: 362 GK-DKGIHVSGHGCQEDQKLMLALTRPKFFIPFHGEHRMLVKHSQTAQGMGVPRENMVVI 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG ++ L D I + D+V G+ L D G D + +R+QL+ G +++ + + + Sbjct: 421 QNGDVVELTQDSIYVADKVSSGIELLDSSRSGMVEDKILKERQQLAEDGVVTIALAVGLN 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTV---------VDLPQFRRKDLKLLR 527 + G P++ G+ + D ++ +L+++ + + + + D L+ Sbjct: 481 GKLIGQPQLHLRGVVSSV-DKVELQELVIRVLEKELSSYWSEYVNSNGHDNTQVDWSRLQ 539 Query: 528 ESISSALRSLLKKVWGKKPLVTVFINK 554 + + +++ +L++ + +PL VF+ + Sbjct: 540 DQLECSVQRMLRREFQGQPL-LVFLMQ 565 >gi|294011325|ref|YP_003544785.1| putative hydrolase [Sphingobium japonicum UT26S] gi|292674655|dbj|BAI96173.1| putative hydrolase [Sphingobium japonicum UT26S] Length = 545 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 207/551 (37%), Positives = 316/551 (57%), Gaps = 11/551 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL+FL LGG GEIGMN+ LYG KW+M+D G++F PGV+LV PD++FI Sbjct: 5 NELIFLALGGSGEIGMNVNLYG----CQGKWVMVDLGLTFADPAYPGVELVLPDLSFIED 60 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + +L+ I +TH HEDH GA+ L + L VP+YA+PF GL+ K E +++++ Sbjct: 61 RKDDLLGIVLTHGHEDHIGAIPYLAADLGVPLYATPFTAGLIRLKLEEEGLTEEVELNVI 120 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +G F V + HSIPE A++I +P G I HTGDWKLD+ +LG + + L Sbjct: 121 DNEGSFALGPFGFRYVPLAHSIPEGNAVLIDTPHGKIFHTGDWKLDETPLLGQPSTPEEL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG+EG+LAL+CDSTN SE + + + +K AKG VLVTTF+S+ +R++++ Sbjct: 181 AAIGDEGVLALVCDSTNVFNPEASGSEGDVHEGLMSTIKGAKGRVLVTTFASNAARLQTL 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A +GRK+ + G SL R++S A G ++ + + PR ++++IATG QG Sbjct: 241 GEVANAVGRKLCVAGRSLDRIISTARTAGYLRDFPPTVDWDDVMALPRNEVMIIATGGQG 300 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+AL++++ +KL E D V+FSS+ IPGNE+AIG I+N L +GV ++ + + Sbjct: 301 EARAALSRIAFDSHP-IKLDEGDLVVFSSKQIPGNEIAIGRIQNALAAKGVLMVTDR-QA 358 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VHVSGHP +L+ MY+W+RPQ+L+ +HGE H+ L L G+ NG +LR Sbjct: 359 EVHVSGHPGRPELEAMYRWVRPQILLPVHGERRHMAEQARLGLASGVPHAVVQSNGDVLR 418 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L PD EII G + DG +I + +RR+++ G +SV V LD + G P Sbjct: 419 LAPDGPEIIGNQATGRLVLDGDVILPADGATMNERRKVALHGQISVAVALDGKGRVIGSP 478 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+P + + + ++ + LRE + A+R + G Sbjct: 479 ALRTQGVPVEEDKAAFLEEA-----ADEAAGAVAKGSQEEEALRERVRLAVRRTATRWTG 533 Query: 544 KKPLVTVFINK 554 KKP+V V + + Sbjct: 534 KKPVVDVLLIR 544 >gi|72383088|ref|YP_292443.1| hypothetical protein PMN2A_1250 [Prochlorococcus marinus str. NATL2A] gi|72002938|gb|AAZ58740.1| Conserved hypothetical protein MG423 [Prochlorococcus marinus str. NATL2A] Length = 644 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 284/565 (50%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +PLGG+GEIG N ++ YG +++D G++FP D + GV++V PD T++ Sbjct: 12 KSPCLRIIPLGGLGEIGKNTCVFEYG----DDIMILDAGLAFPTDGMHGVNVVMPDTTYL 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +TH HEDH G + ++P+ Y P A+ +L K V+ + Sbjct: 68 RENQNRIRGLVVTHGHEDHIGGISHHLKNFNIPIVYGPPLAMSMLRGKMEEAGVADRTTI 127 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + VG FS+E VR HSI ++ + + +PVG + TGD+K D G D Sbjct: 128 QVCGPREVIKVGQHFSVEFVRNTHSISDSYSFAVTTPVGVVFFTGDFKFDHTPPDGQPAD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G++G+L L+ DSTN+ G SE + N+ + A+G V+VTTF+SS R Sbjct: 188 LARMAHYGDKGVLCLLSDSTNSEVTGFTPSEYSVFPNLDRYIATAEGRVMVTTFASSTHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIA 298 + ++++A + GRK+ LLG S+ VV A ++G + D LF + P + ++ Sbjct: 248 VAMLLELAMKNGRKVGLLGRSMLNVVGKARELGYMRFPDDLFFPIKQIRDLPDRETFLLM 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++RGE ++V+L DTVIFS+ IPGN +++ H ++L++ G +VI Sbjct: 308 TGSQGESMAALSRIARGEHQHVQLKTSDTVIFSASPIPGNTISVMHTIDKLIKLGAKVIY 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M RP+ + +HGE V H + A+ G+ V + Sbjct: 368 GK-DKGIHVSGHGCQEDQKWMLGLTRPKYFIPVHGEYRMQVLHGKTAVSMGVHPENVLVM 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L PD + V G+ L D G + +R+QL+ G ++V + Sbjct: 427 ENGDVAELRPDSLLQGSPVKSGVELLDSSRTGIVDTRVLKERQQLADDGVITVLTPISTD 486 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D + + + + + + D L+ Sbjct: 487 GVMVAPPRVNLRGVITNV-DAKTMVNWTEREINWVLENRWKQLVLKTGGKSVEVDWIGLQ 545 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + S L L++ +PLV + Sbjct: 546 REVESGLSRRLRREVQAEPLVLCLV 570 >gi|284928624|ref|YP_003421146.1| hypothetical protein UCYN_00320 [cyanobacterium UCYN-A] gi|284809083|gb|ADB94788.1| conserved hypothetical protein [cyanobacterium UCYN-A] Length = 617 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 177/567 (31%), Positives = 309/567 (54%), Gaps = 21/567 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N + YG + I+ID G++FP D++ GV++V PD+T++ Sbjct: 24 KESTLKIIPLGGLHEIGKNTCVLEYG----DEIILIDAGIAFPTDEMHGVNIVLPDMTYL 79 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPC 120 + R + + TH HEDH G + +P+ Y AI LL K V+ + Sbjct: 80 RENRHKIKGMIATHGHEDHIGGIAYHLKQFDIPIIYGPKLAIALLRDKLHEAGVADRTTL 139 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + + + + F +E +R HSI ++ L I +P+G I+HTGD+K+D I G+ D Sbjct: 140 KTVEPREMTRISSSFLVEFIRNTHSIADSFTLAIHTPLGVIIHTGDFKVDYTPIDGEYFD 199 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G+ SE+ + N+ I+ +G ++VTTF+SSV R Sbjct: 200 FQKLAEHGEKGVLCLLSDSTNAELPGSTASERSVYPNLDRIISQTEGRLMVTTFASSVHR 259 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 + I+ +A++ RK+V++G S+ V++ A +G I + LF+ ++ P +Q++++ Sbjct: 260 VNIILQLAQKHKRKVVVIGRSMLNVIAHARTLGYITCSEDLFIPLKAARNIPDKQVLILT 319 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL ++SRGE ++K+ + DT++FS+ IPGN +++ + +RL+ QG VI Sbjct: 320 TGSQGEPLAALTRISRGEHNHIKVRQGDTIVFSANPIPGNTISVVNTIDRLMMQGANVIY 379 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 +HVSGH D K M RP+ V +HGE LV H + A + GI + V Sbjct: 380 GRHHG-IHVSGHGSQEDHKLMLALTRPKFFVPVHGEHRMLVKHAQTAYEMGISSENIIIV 438 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +NG ++ L + I + +V G+ L D + + + R+QL+ G + V+ + Sbjct: 439 KNGDVIELSNNSINVAGKVPSGIELVDQSGV--VHENVLQDRQQLAKDGVIIVSASIGED 496 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-------LPQFRRKDLKLLRES 529 + P++ G+ + + +L+++ + + + + + + ++E Sbjct: 497 RELIDSPQVDLRGVVTKV-EKNVLQQLVVRAIENILKNRWEDFVAINNKNKINWSYVKEE 555 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKIS 556 I S L+ L+K+ +PLV +F+ +IS Sbjct: 556 IESTLQRLIKRELRSEPLV-IFVLQIS 581 >gi|227874908|ref|ZP_03993060.1| possible metal-dependent hydrolase [Mobiluncus mulieris ATCC 35243] gi|227844485|gb|EEJ54642.1| possible metal-dependent hydrolase [Mobiluncus mulieris ATCC 35243] Length = 531 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 159/539 (29%), Positives = 279/539 (51%), Gaps = 15/539 (2%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M + + K ++IDCGV FP++ PGVDL+ PD ++I ++ + +TH HEDH Sbjct: 1 MMVLE----TEGKILIIDCGVLFPEEIQPGVDLILPDFSYIKGRINQVVGMVLTHGHEDH 56 Query: 81 YGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 GA+ L +PVY S + L+E K R+ G ++D+G F +E Sbjct: 57 IGAVPYLLKHRSDIPVYGSGLTLALVEPKLQEHRL-PVTNLRVKTEGQRLDLGPFHLEFC 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 VNHSIP+ +A+++R+ G+ + TGD+K+D + G +TD + G EG+ DST Sbjct: 116 AVNHSIPDALAVMVRTKAGSALVTGDFKMDQLPLDGRITDLRAFARWGEEGVDLFCADST 175 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 NA G SE+ I + D+ A G ++V +F+S V R++ +++ A R++ L+G Sbjct: 176 NAEVPGFIPSEREIGPVLDDVFYRATGQIVVASFASHVHRVQQVLNAAAASNRRVALVGR 235 Query: 260 SLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 S+ R + +A D G ++ + P E+ + +ATGSQGEP +AL++++ E R Sbjct: 236 SMVRNMEIAADKGFLQVPGEVLIDLNDVNSLPPERRVYMATGSQGEPMAALSRIANQEHR 295 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 ++ + E DTV+ +S IPGNE+++G + NRL+ G RVI + VHVSGH +L Sbjct: 296 SISIGEGDTVVLASSLIPGNEMSVGRVINRLMRLGARVIHKG-NSKVHVSGHAAAGELLY 354 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVV 436 Y ++P+ ++ IHGE HLVA+ LA++ G+ V +G + + EI+ +V Sbjct: 355 AYNIVKPKNVMPIHGEIRHLVANGGLAVKTGVKSQNVMLAEDGVCVEVKKGRAEIVGQVP 414 Query: 437 HGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDG 495 DG IG+ + + RR L+ G ++V V+++ I P ++ G+ Sbjct: 415 CDYVYVDGTSIGELGEQELYDRRVLAEEGFVAVYVVMELTTGTILAGPTVIARGVA---- 470 Query: 496 DGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + + + + + +V+ + ++ + L + K + P++ + + Sbjct: 471 ENAAVFRDIEPQIADALVEAASGGKSTVRDMERVARRTLGRWVSKRLRRAPMIVPLVVE 529 >gi|124026825|ref|YP_001015940.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. NATL1A] gi|123961893|gb|ABM76676.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. NATL1A] Length = 649 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 284/565 (50%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ L +PLGG+GEIG N ++ YG +++D G++FP D + GV++V PD T++ Sbjct: 17 KSPCLRIIPLGGLGEIGKNTCVFEYG----NDIMILDAGLAFPTDGMHGVNVVMPDTTYL 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +TH HEDH G + ++P+ Y P A+ +L K V+ + Sbjct: 73 RENQNRIRGLVVTHGHEDHIGGISHHLKNFNIPIVYGPPLAMSMLRGKMEEAGVADRTTI 132 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + VG FS+E VR HSI ++ + + +PVG + TGD+K D G D Sbjct: 133 QVCGPREVIKVGQHFSVEFVRNTHSISDSYSFAVTTPVGVVFFTGDFKFDHTPPDGQPAD 192 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G++G+L L+ DSTN+ G SE + N+ + A+G V+VTTF+SS R Sbjct: 193 LARMAHYGDKGVLCLLSDSTNSEVTGFTPSEYSVFPNLDRYIATAEGRVMVTTFASSTHR 252 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIA 298 + ++++A + GRK+ LLG S+ VV A ++G + D LF + P + ++ Sbjct: 253 VAMLLELAMKNGRKVGLLGRSMLNVVGKARELGYMRFPDDLFFPIKQIRDLPDRETFLLM 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++RGE ++V+L DTVIFS+ IPGN +++ H ++L++ G +VI Sbjct: 313 TGSQGESMAALSRIARGEHQHVQLKTSDTVIFSASPIPGNTISVMHTIDKLIKLGAKVIY 372 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M RP+ + +HGE V H + A+ G+ V + Sbjct: 373 GK-DKGIHVSGHGCQEDQKWMLGLTRPKYFIPVHGEYRMQVLHGKTAVSMGVHPENVLVM 431 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L PD + V G+ L D G + +R+QL+ G ++V + Sbjct: 432 ENGDVAELRPDSLLQGSPVKSGVELLDSSRTGIVDTRVLKERQQLADDGVITVLTPISTD 491 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D + + + + + + D L+ Sbjct: 492 GVMVAPPRVNLRGVITNV-DAKTMVNWTEREINWVLENRWKQLVLKTGGKSVEVDWIGLQ 550 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + S L L++ +PLV + Sbjct: 551 REVESGLSRRLRREVQAEPLVLCLV 575 >gi|258406059|ref|YP_003198801.1| beta-lactamase domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798286|gb|ACV69223.1| beta-lactamase domain protein [Desulfohalobium retbaense DSM 5692] Length = 555 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 174/561 (31%), Positives = 296/561 (52%), Gaps = 16/561 (2%) Query: 2 KNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 KN+ + PLGG+G+IG+N L ++ ++IDCG+ FP + GVD+V P Sbjct: 4 KNDTPWVTLSPLGGLGQIGLNCMLLE----TADSAVLIDCGLMFPDEVHLGVDVVIPRFD 59 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 F+++++ L A+ +TH HEDH GAL L + VP+Y+SPF + L+ K ++ + Sbjct: 60 FLLEKKHKLKAVVLTHGHEDHIGALPWLLKEMPEVPLYSSPFTLALVRNKLREHDLADTV 119 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++G F V HSI + L I +PVG VHTGD+K+D + + T Sbjct: 120 TLCPMEPRQSAELGDFRFHFFPVCHSIIKGYGLGIETPVGRFVHTGDFKIDRNPLGEHAT 179 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D ++ G+ LM DSTN R+G ++E+ I+ ++ DI A G +LVT FSS V Sbjct: 180 DLEAFGDFAAGGVTLLMSDSTNVERDGYALTEREIRDSLDDIFTQADGRILVTLFSSHVQ 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVI 297 RI+ I ++A + GRK+ + G SL + A ++G + D+ F+S E P ++++++ Sbjct: 240 RIQEIFELAHRYGRKVAVSGRSLNVNIETARELGYLEFADEDFVSLEDLAHLPDDKVVLL 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP SAL +L+ G+ R +++ + D V+ SSR IPGN AI + N+L + G V+ Sbjct: 300 VTGSQGEPMSALTRLAEGDHRQLRVHKGDLVVMSSRFIPGNTKAITKVINKLYKLGAEVL 359 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPP 415 E + +H SGH + +L+ M + + P+ + +HGE HL H ELA + G+A Sbjct: 360 NEKVQA-IHASGHAHKEELRTMLETVHPKFFIPVHGEYRHLHKHIELARECGVAPERCFL 418 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + NG+ + LF + + D + L DG +G + +RR L G + ++++ Sbjct: 419 LENGQPVTLFKGEVRLEDPIGVESVLVDGKGVGDVGRTILKERRLLGDEGMVVALLVIEE 478 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I P++ G ++ + + ++ ++P+ + + I SAL Sbjct: 479 ATGEIILGPQVQSKGF-VFERHFSHVLDDAKEVMLDVYANMPKGAS---QKMENRIKSAL 534 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R +KV + P++ + + Sbjct: 535 RRHFRKVLDRDPVIVPLVITV 555 >gi|302390875|ref|YP_003826695.1| RNA-metabolising metallo-beta-lactamase [Acetohalobium arabaticum DSM 5501] gi|302202952|gb|ADL11630.1| RNA-metabolising metallo-beta-lactamase [Acetohalobium arabaticum DSM 5501] Length = 557 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 181/557 (32%), Positives = 302/557 (54%), Gaps = 10/557 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + + LGG G +G NM Y + +++D G+ FP D++PGVD V PDIT++ + Sbjct: 6 DRIGIIQLGGKGVVGSNMIAVEY----QNEILVLDAGIMFPTDNMPGVDYVIPDITYLQE 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ + A+ ++H HEDH GA+ L S +++P+Y + I L++ K ++ K Sbjct: 62 NKQQVKALLLSHGHEDHIGAVPFLISEINIPIYGTELTIALVKEKLKENKLLHKTELNQV 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 Q +K + F I+ + V+HSIP+ A+ I +PVG I++TGD+K+D + I D+TD L Sbjct: 122 QPREKTKINNFQIQFINVSHSIPDAAAISITTPVGQILYTGDFKIDQNPINDDLTDFYKL 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+LAL+ DSTNA ++G SE I K++ D + A+G ++ FSS + R++ + Sbjct: 182 AHLGEEGLLALLSDSTNAEQKGYSRSESSIGKSLQDQFRTAQGKIIAAAFSSHIHRLQQV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 + IA++ RK+ + G S+ + V +A +G + ++ + Y EQ++++ TGSQ Sbjct: 242 VSIAKEYDRKVAISGRSMIKTVKIARKLGHLDLPAEMLIDINDIDKYNPEQVVILMTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL +++RG+ R +++ +DTVI S+ IPGNEVA+ + N+L+E G VI + Sbjct: 302 GEPMAALTRIARGDHRQIEVTPQDTVIISATPIPGNEVAVSNTINQLLETGADVIYYSHD 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + +LK M +PQ + +HGE HL H LA + GI + NG Sbjct: 362 H-IHVSGHGFQEELKLMLNLTKPQYFIPVHGEYRHLHHHALLAQEIGIPKENIFVTPNGI 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NI 479 L L D +I D+V G L DG G + + R+ LS G ++V V +D I Sbjct: 421 KLELTKDEAKITDKVPTGKILIDGSQTGSLDNTVLEDRQSLSEDGIITVMVTIDRETDRI 480 Query: 480 FGVPEIVDIGIPA-YDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 G P++ G+ + + V + L+ I + + SLL Sbjct: 481 IGGPDLTSRGVTYQQNSQTETLLNKAKSKVAKILDRADIENIDQNSKLKSRIKAGINSLL 540 Query: 539 KKVWGKKPLVTVFINKI 555 +K P++ I ++ Sbjct: 541 RKHLNSNPVILPLIMEV 557 >gi|254457611|ref|ZP_05071039.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] gi|207086403|gb|EDZ63687.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] Length = 650 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 160/558 (28%), Positives = 289/558 (51%), Gaps = 14/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N+ ++ + + I++D G+SFP +D+ GVD++ PD T++ Sbjct: 99 SKAKIRITPLGGLGEIGGNITVFE----TENEAILVDIGMSFPDEDMHGVDILVPDFTYL 154 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + A+ ITHAHEDH GA+ L+ + P+YA+P + ++ K + + + Sbjct: 155 REIKHKIKAVIITHAHEDHIGAMPYLYKEMQFPIYATPLPLAMIGNKFDEHHIKECRKYF 214 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D+G F +E + + HSI ++ +L I + G I+HTGD+K+D + G D Sbjct: 215 NPVVKREVYDIGEDFKVEWMHMTHSILDSSSLAITTEAGTIIHTGDFKIDHTPVDGYTAD 274 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTN+ SE + + + A+G VL++TFSS++ R Sbjct: 275 LHRLAHYGEKGVLCLLSDSTNSYNTIPTPSELSVAPALDRVFAKAEGRVLLSTFSSNIHR 334 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I + GRK+ ++G S++R + +A+ IK +F+ + ++++++ Sbjct: 335 VFQAIQYGVKYGRKVCVIGRSMERNIEIAMQYDYIKLPKSIFVEPDQIANMNDKEILIVT 394 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL ++S GE R+VK+ D ++ SSRAIPGNE +I + N L G +V + Sbjct: 395 TGSQGEPSSALFRMSIGEHRHVKIKPTDLIVLSSRAIPGNEGSISGMLNHLQRAGAKVAS 454 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + K M + + P+ + +HGE H++ HKE + G+ + + Sbjct: 455 ER---DIHVSGHASMEEQKLMLRLVNPKFFLPVHGEYNHVMKHKETGIMCGVPERNIMLM 511 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G + + P + + V G D + D I R++L+ G + + +D Sbjct: 512 TDGDQIEVAPKYMRKVKTVKTGKTYIDNQNNHQIEDDIILDRQKLASDGIVMLVAQVDGK 571 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 H + P++ GI A D K + + ++ + + ++ + L + +R Sbjct: 572 HCKMQAKPKVTTFGIVADKQDKA-FAKEMEDILENFLLHVKDGQIENPRALENDLRQIVR 630 Query: 536 SLLKKVWGKKPLVTVFIN 553 + + K PL+ + Sbjct: 631 KHIFRKMKKYPLIVPHVL 648 >gi|319934895|ref|ZP_08009340.1| beta-lactamase [Coprobacillus sp. 29_1] gi|319810272|gb|EFW06634.1| beta-lactamase [Coprobacillus sp. 29_1] Length = 601 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 160/562 (28%), Positives = 276/562 (49%), Gaps = 16/562 (2%) Query: 1 MKNE----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 +KN+ + LGG+ E+G NM + GV F +D LPG+D V P Sbjct: 43 IKNDSHTLDTKVFALGGLNEVGKNMYCIEHDDEIIIID----AGVKFAEDGLPGIDYVIP 98 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 D +++ + +K + A+ ITH HEDH G + L +H+P +YASP A ++ K R++ Sbjct: 99 DYSYLKRNQKKIKALLITHGHEDHIGGIPFLLQVVHIPFIYASPLACAMIRRKLEERRLT 158 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + ++ F+I + NHSIPE++ +++ +P G +V TGD+K D + Sbjct: 159 QATKLVQIDNLYQIKTKHFNIGFFKTNHSIPESLGIIVNTPNGRVVATGDFKFDLTPVG- 217 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D D + +G G+ L+ DSTNA ISEK + ++ + + +G ++V TF+S Sbjct: 218 DPADYQVMSFLGETGVTLLLSDSTNAEVPNFSISEKQVAYSVQEEFRKTEGRLIVATFAS 277 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQL 294 +V R++ IID A + RKI++ G S++ + V+ +G IK D+ F+ +E P ++ Sbjct: 278 NVHRVQQIIDAAVKFNRKILVFGRSMENNIQVSRKLGYIKCPDRFFIKNEEAKRLPDNEI 337 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 ++ TGSQGE +AL++++ G R + + DTV+FSS IPGN ++ + N+L G Sbjct: 338 CILCTGSQGEALAALSRIANGTHRQISIKSGDTVLFSSNPIPGNAGSVSKVINKLYRAGA 397 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--C 412 RV+ +A +H SGH + K M RP+ +HGE L H +L + G+ Sbjct: 398 RVLTNEAINNLHTSGHASQEEQKLMLLLTRPKYFFPVHGEYRMLKIHAKLFEEVGLIKGN 457 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 + NG + L + + V DG I + + R+ LS G +SV + Sbjct: 458 AFVLSNGDSILLRNEEARLGPRVHVDDIYVDGNDITGLSTAVLRDRQILSEDGMVSVLIS 517 Query: 473 LDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 +D+ + P I+ G Y D ++ + V + L + + ++ +I Sbjct: 518 MDSRAGCLLNKPIIMSRGF-VYMKDSTEMIREAEMLVGKALTQLLKRKTT-FGEIKNTIR 575 Query: 532 SALRSLLKKVWGKKPLVTVFIN 553 L + + P++ I Sbjct: 576 DTLGPYFYQKTKRNPMIIPVIM 597 >gi|297623851|ref|YP_003705285.1| RNA-metabolising metallo-beta-lactamase [Truepera radiovictrix DSM 17093] gi|297165031|gb|ADI14742.1| RNA-metabolising metallo-beta-lactamase [Truepera radiovictrix DSM 17093] Length = 574 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 162/556 (29%), Positives = 290/556 (52%), Gaps = 20/556 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG NM Y + ++ID G++FP D+ GVD++ P I ++++ Sbjct: 31 LRIIPLGGMGEIGKNMFAVEY----EDEILLIDGGLAFPDADMLGVDILVPKIDYVVENA 86 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 + +TH HEDH G + + L +P+Y + +GLL K ++ + Sbjct: 87 ARVKGWVLTHGHEDHIGGIPYMLKLLPKIPMYGAKLTLGLLRGKFEEFKLKESDADLREI 146 Query: 124 QAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +++ + F+++ R+ HSIP+ L+I +P+G +VH+GD+KLD + G + Sbjct: 147 STDERIKISKYFTVDFFRMTHSIPDNSGLIIHTPLGRVVHSGDFKLDYNPADGKTSHLHK 206 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G EG+LAL+ DSTNA R G SE+ + ++K+AKG V+VTTF+S + R+++ Sbjct: 207 LAQAGQEGVLALISDSTNAERPGYTPSERDVMNGFEQLVKDAKGRVIVTTFASHIHRLQN 266 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I +AE+ R++++ G S+ + +A ++G ++ S + ++++ + TGSQ Sbjct: 267 FIRVAERYDRRVIVEGRSMVKNTRIAQELGYLETKHPLASPDDLAELADDKILFLCTGSQ 326 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P +AL++L+ G + + L DTVI SS IPGNE A+G + N+L +GV V Sbjct: 327 GQPMAALSRLAAGTHKKISLKPGDTVILSSNPIPGNEEAVGRVINQLYARGVNVFY-PPT 385 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNGK 420 VH SGH +LK + RP+ + HGE H + H++LA + NG Sbjct: 386 YRVHASGHASQEELKLILDLTRPKFFIPWHGEVRHQLNHQKLAAGMATPPLKSVIAENGD 445 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFL--IGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 +L L + ++ + +V G+ D + + I R+ LS G + + L + + Sbjct: 446 ILELTRNDLKKVGQVDAGVLYIDAVGKSSEEITEPIIRDRQTLSSEGVVVIMALAGRNPS 505 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + E++ G+ + +++ + K + + + +R L +R+ I +R L Sbjct: 506 V----EVITRGVS---QNHRELNSEIEKIALENLKRGVREKRT-LSDIRDDIFYPVRRYL 557 Query: 539 KKVWGKKPLVTVFINK 554 +K G+ PL+ + + Sbjct: 558 RKTTGRNPLIVPTVIE 573 >gi|33862339|ref|NP_893899.1| hypothetical protein PMT0066 [Prochlorococcus marinus str. MIT 9313] gi|33640452|emb|CAE20241.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 667 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 167/565 (29%), Positives = 294/565 (52%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +M+D G++FP D + GV++V PD +++ Sbjct: 19 KEPCLRVIPLGGLHEIGKNTCVFEYG----DDIMMVDAGLAFPSDGMHGVNVVMPDTSYL 74 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 75 RENQKRIRGMIVTHGHEDHIGGIPHHLKHFNIPVIYGPRLAMSMLQGKMEEAGVTDRTTI 134 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG+++ TGD+K D + G+ D Sbjct: 135 QTVSPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGSVIFTGDFKFDHTPVDGENFD 194 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L DSTNA G C E+ + + + A G V++TTF+SS+ R Sbjct: 195 MARLAHHGEQGVLCLFSDSTNAEVPGFCPPERSVFPALDRHISQADGRVIITTFASSIHR 254 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 255 VSMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQIRDMPDRETLLLM 314 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE ++V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 315 TGSQGEPLAALSRISRGEHQHVQVKNSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 374 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 E +HVSGH + D K M +P+ V +HGE L+ H + A G+ + + Sbjct: 375 GKGEG-IHVSGHGFQEDHKLMLALTKPKFFVPVHGEHRMLICHSKTAQSMGVASENILIL 433 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG +++L D I D V G+ L D G + +R+QL+ G ++V + Sbjct: 434 DNGDVVQLSADSISKGDSVKAGIELLDASRNGIVDARVLKERQQLAEDGVVTVLAAISTD 493 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D L+ Sbjct: 494 GVMVAPPRVNLRGV-VTAADPRKMSIWTEREISWVLENRWKQFSRQTDGKTPEVDWMGLQ 552 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 553 REVEVGLGRRMRRELQVEPLLLCLV 577 >gi|282898106|ref|ZP_06306101.1| conserved hypothetical protein [Raphidiopsis brookii D9] gi|281197250|gb|EFA72151.1| conserved hypothetical protein [Raphidiopsis brookii D9] Length = 589 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 286/552 (51%), Gaps = 17/552 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ EIG N ++ Y + I++D G++FP + + GV++V PD T++ Sbjct: 7 NSALKIIPLGGLHEIGKNTCVFEY----EDEIILLDAGLAFPTEAMHGVNIVLPDTTYLR 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + + +TH HEDH G + +P +Y A+ +LE K VS + Sbjct: 63 ENKHKIRGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLALAVLEGKLEEAGVSDRTQLR 122 Query: 122 SFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D V +G F +E +R HSI ++ + I +P+G ++HTGD+K+D I G+ D Sbjct: 123 KVMPRDVVRIGKSFFVEYIRNTHSIADSFTVAIHTPIGVVIHTGDFKIDHTPIDGETFDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L L+ DSTNA G SE+ + N+ + A+G + VTTF+SSV RI Sbjct: 183 QRLAEHGEKGVLCLLSDSTNAEVPGFTPSERAVYPNLDRVFSQARGRLFVTTFASSVHRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ++ +A++ R + ++G S+ ++ A ++G IK +D LF + P E ++++ T Sbjct: 243 NIVLQLAKEHNRVVTVIGRSMLNFIAHARNLGYIKCEDNLFQPLHTIRNLPDENVVILTT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +A+ +++ E ++K+ E DTV+FS+ IPGN +A+ + ++L+ QG +V+ Sbjct: 303 GSQGETMAAMTRIANKEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVVYG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 E VHVSGH D K M RP+ V +HGE LV H E A GI + +R Sbjct: 363 R-EKGVHVSGHGCQEDQKLMIALTRPKFFVPVHGEHRMLVKHSETAQSMGISPENMVIIR 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L + I I +V G+ L D G + + +R+ ++ G +V +D + Sbjct: 422 NGDVIELAENSIRIAAQVPSGIELVDTTSSGMVSAKVLQERQTMAAEGLATVAAAIDWNG 481 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD------LPQFRRKDLKLLRESIS 531 + PEI G+ + + K + + + + P D L++++ Sbjct: 482 KLLAKPEIYLRGV-VTSIERSLLLKWVQQRIEEILSVRWSDFCTPGSSDVDWGGLQDTLE 540 Query: 532 SALRSLLKKVWG 543 L L++ Sbjct: 541 KELGRSLRRELQ 552 >gi|291276277|ref|YP_003516049.1| metallo-beta-lactamase [Helicobacter mustelae 12198] gi|290963471|emb|CBG39301.1| Putative metallo-beta-lactamase [Helicobacter mustelae 12198] Length = 673 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 167/554 (30%), Positives = 293/554 (52%), Gaps = 11/554 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ PLGG+GEIG NM + + I+ID G+SFP++++ GVD++ PD ++I Sbjct: 122 KAKVRITPLGGLGEIGGNMMVME----TENSAIIIDVGMSFPEENMHGVDILIPDFSYIH 177 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + + + ITHAHEDH GA+ L+ L P+Y +P A+G++ K + K + Sbjct: 178 AIKDKIAGVVITHAHEDHIGAVPYLYKQLQFPLYGTPLALGMIGNKFDEHGLKKFRSFFK 237 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +G F IE + + HSI + AL I++ G I+HTGD+K+D I TD Sbjct: 238 IVEKRHPIPIGDFEIEWIHITHSIIDASALAIKTEAGVIIHTGDFKIDHTPIDDLPTDLH 297 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G++ L+ DSTN+ + G+ SE + + K+A+G V+++TFSS++ R+ Sbjct: 298 RLAHYGEQGVMLLLSDSTNSHKTGSTASEASVGPTFDALFKSAEGRVIMSTFSSNIHRVY 357 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + RKI ++G S+++ + +A ++G I ++F+ YP E+++++ TG Sbjct: 358 QAITYGIKYNRKIAVIGRSMEKNLDIARELGYIDLPSKIFIEAHEVNNYPDEEILIVTTG 417 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ D VI S++AIPGNE ++ + N L++ RV +D Sbjct: 418 SQGETMSALYRMATDEHRHIKIKPTDMVIISAKAIPGNESSVSTVLNFLIKARARVAYQD 477 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH + K M + I+P+ + IHGE H+ HKE A++ G+ + + + Sbjct: 478 F-SEIHVSGHAAQEEQKLMLRLIKPKFFLPIHGEYNHVARHKETAMKCGVLEKNIYLMED 536 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G + + P I + + G D + ++ + +R+ L+ G L V ++ Sbjct: 537 GDQIEVNPSYIRKVKTIKSGKVFIDNQTCTEIDNIVVNERQVLADCGILIVVACINKTEQ 596 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + +I +GI + K L + + +L + KLL + + LR + Sbjct: 597 KLLKDTQITTLGILNPKEEKAY-AKELETLLGMHLKNLKPEVIGNAKLLENDLRNMLRKV 655 Query: 538 LKKVWGKKPLVTVF 551 L K K P + + Sbjct: 656 LFKKTKKYPTIIIH 669 >gi|227518439|ref|ZP_03948488.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] gi|227074117|gb|EEI12080.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] Length = 562 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGKMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|317051148|ref|YP_004112264.1| RNA-metabolising metallo-beta-lactamase [Desulfurispirillum indicum S5] gi|316946232|gb|ADU65708.1| RNA-metabolising metallo-beta-lactamase [Desulfurispirillum indicum S5] Length = 581 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 179/559 (32%), Positives = 292/559 (52%), Gaps = 16/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + + PLGG+ EIGMN+ Y +S+ I++DCG+ FP++ GVD+V PD T+I Sbjct: 34 KFDGIKITPLGGLREIGMNVTCYE----TSKHMIIVDCGLMFPEETQLGVDVVIPDFTYI 89 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + +FITH HEDH GA+ L + + ++A+ G++ + + + Sbjct: 90 VANASKVQGLFITHGHEDHIGAIPFLVRQVPKLKIFATRLVAGMIRHRLKERNLENAVTI 149 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I A D+V+V FS+E + VNHSI + AL I +P G I+HTGD+K+D + G V D Sbjct: 150 IEVAAKDRVNVNDFSVEFIAVNHSIADACALAIDTPHGVIIHTGDFKIDYTPVDGRVIDL 209 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 S G G+LAL+ DSTN G +E +++ + + ++ KG V+V+ FSS++ RI Sbjct: 210 PSFARYGENGVLALLSDSTNTESVGMSATEGVVRQALDEEIEGCKGKVIVSAFSSNIHRI 269 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ++++DIA++ GRKI G S+ +A + G + +D+ + + ++L++I T Sbjct: 270 QTLMDIAKKFGRKIAFDGRSILNNTRIARETGYMHFEDEDIIPIKDTKGIAPQKLMIITT 329 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL +++ +VK+ DT+IFSS+ IPGNE ++ + N+L +G RV+ Sbjct: 330 GSQGESLAALPRMANDGHAHVKIKPGDTIIFSSKTIPGNERSVSKLVNQLFLKGARVVYN 389 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH Y + K M +RP+ + IHGE HL H ELA I + ++ Sbjct: 390 --NRRVHASGHAYQEEQKTMINLVRPKYFIPIHGEYRHLYLHSELAKSMNIPDQNIFILK 447 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG+ L L +++ E V+G DG + + + RR L G V++ + Sbjct: 448 NGQPLLLNEKEGKVLPEEVNGRVFIDGSSMEGVEEPVLMDRRSLGSQGIAVVHMAISQKD 507 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + P +V G +I + + +T + R LR +R Sbjct: 508 GELVSGPNLVTSGFELSAQTRKEIEDEIKEIFSSTYEEGKTQRL-----LRIDARRIIRK 562 Query: 537 LLKKVWGKKPLVTVFINKI 555 +KK ++PLV I +I Sbjct: 563 SMKKKADREPLVLPVITEI 581 >gi|229546137|ref|ZP_04434862.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX1322] gi|256852833|ref|ZP_05558203.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|229308661|gb|EEN74648.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX1322] gi|256711292|gb|EEU26330.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|315029170|gb|EFT41102.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 565 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 148/566 (26%), Positives = 266/566 (46%), Gaps = 14/566 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + IF+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGIFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPVQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ V + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLQLMLNLMKPKYFVPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +I G Y + K V V + + L++ I Sbjct: 475 RREKRIVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIREN 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + ++++ Sbjct: 534 LSRYLFEQTKRRPVILPVIMEATQRK 559 >gi|229550326|ref|ZP_04439051.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis ATCC 29200] gi|307268704|ref|ZP_07550073.1| hypothetical protein HMPREF9498_00836 [Enterococcus faecalis TX4248] gi|307273528|ref|ZP_07554771.1| hypothetical protein HMPREF9514_02294 [Enterococcus faecalis TX0855] gi|307274491|ref|ZP_07555674.1| hypothetical protein HMPREF9521_00118 [Enterococcus faecalis TX2134] gi|307288514|ref|ZP_07568500.1| hypothetical protein HMPREF9505_01897 [Enterococcus faecalis TX0109] gi|312951054|ref|ZP_07769962.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229304589|gb|EEN70585.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis ATCC 29200] gi|306500589|gb|EFM69920.1| hypothetical protein HMPREF9505_01897 [Enterococcus faecalis TX0109] gi|306508885|gb|EFM77972.1| hypothetical protein HMPREF9521_00118 [Enterococcus faecalis TX2134] gi|306509805|gb|EFM78832.1| hypothetical protein HMPREF9514_02294 [Enterococcus faecalis TX0855] gi|306515016|gb|EFM83562.1| hypothetical protein HMPREF9498_00836 [Enterococcus faecalis TX4248] gi|310631009|gb|EFQ14292.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315035071|gb|EFT47003.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315154091|gb|EFT98107.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315157378|gb|EFU01395.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315575756|gb|EFU87947.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] Length = 565 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 146/566 (25%), Positives = 266/566 (46%), Gaps = 14/566 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +I G Y + K V V + + L++ I Sbjct: 475 RREKRIVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIREN 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + ++++ Sbjct: 534 LSRYLFEQTKRRPVILPVIMEATQRK 559 >gi|313143542|ref|ZP_07805735.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313128573|gb|EFR46190.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 701 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 162/551 (29%), Positives = 288/551 (52%), Gaps = 12/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GEIG N+ + + I+ID G+SFP +D+ GVD++ PD +++ + Sbjct: 156 VRITPLGGLGEIGGNITVIE----TQDSAIVIDVGMSFPNEDMHGVDILVPDFSYLFAIK 211 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQ 124 + + ITHAHEDH GA+ L+ L P+Y +P +G++ +K + K + + Sbjct: 212 DKIAGVIITHAHEDHIGAVPYLFKLLQFPIYGTPLPLGMIGSKFDEHGLKKFRSFFKIVE 271 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +GAF +E + + HSI + AL IR+ G I+HTGD+K+D + TD L Sbjct: 272 KRKPIKIGAFEVEWINITHSIIDASALAIRTEAGVIIHTGDFKIDHTPVDNLPTDLHRLA 331 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG++ L+ DSTN+ R G SE + + K A+G V+++TFSS++ R+ I Sbjct: 332 HYGEEGVMLLLSDSTNSHRSGVTPSEASVGPTFETLFKQAQGRVIMSTFSSNIHRVYQAI 391 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + RK+ ++G S+++ + +A ++G I +F+ YP E+++++ TGSQG Sbjct: 392 THGLKYNRKVAVIGRSMEKNLELARELGYIDLPQNIFIEAHEVEKYPDEEVLIVTTGSQG 451 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SAL +++ E R++K+ D VI S++AIPGNE ++ + N L++ G +V +D Sbjct: 452 ETMSALYRMATDEHRHIKIKPSDMVIISAKAIPGNEGSVSTVLNFLMKAGAKVAYQDF-S 510 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 +HVSGH + K M + ++P+ + +HGE H+ HK+ A+ G+ + + +G Sbjct: 511 EIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHIARHKQTAIACGVMEKNILLMEDGDQ 570 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + + P ++ I V +G D + + + + R+ L+ G + ++ + I Sbjct: 571 IEVNPSYMKKIRSVKNGKTFIDNQINRQIENDVVLDRQALASDGIVIISAKISKDRKILE 630 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 +I G+ A D G K + T+ V + + K L + + + + K Sbjct: 631 T-KITSYGLVADKEDKG-FEKEMNDTLEFVVKNFKVEG-FNAKNLENEVHNTFKRHIFKK 687 Query: 542 WGKKPLVTVFI 552 K P + I Sbjct: 688 VKKYPTIVPMI 698 >gi|117924914|ref|YP_865531.1| beta-lactamase domain-containing protein [Magnetococcus sp. MC-1] gi|117608670|gb|ABK44125.1| beta-lactamase domain protein [Magnetococcus sp. MC-1] Length = 559 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 197/557 (35%), Positives = 316/557 (56%), Gaps = 13/557 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LPLGG+GEIGMN+ +Y K ++ D G++FP D PGVD++ PDI ++ + + Sbjct: 9 VRILPLGGLGEIGMNLMVYE----CQGKLLVFDTGLTFPSPDTPGVDVIIPDIRWLEERK 64 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++++ I +TH HEDH GAL +W L P++ + F +GL++ K +S + Sbjct: 65 QDVVGIILTHGHEDHIGALPYVWPRLESPIFGTAFTLGLVKMKFKEHDLS-TATIREVRH 123 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + VG F++ + V HSI + A+ IR+P+G ++H+GD+K D + G +D SL Sbjct: 124 REAFQVGPFNLIFIHVTHSIVDASAVAIRTPIGTLLHSGDFKFDHTPVNGLTSDLFSLAK 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G EG+LAL+ DSTN R G+ SE ++ + + M A+G V+ TFSS++ RI+ I+D Sbjct: 184 LGEEGVLALLSDSTNVDRSGSSRSESSVRPALDEQMARAQGLVVCATFSSNIHRIQQIVD 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQGE 304 A GRK+VL G S++ V VA ++G I+ D ++ +S + R +L +I+TGSQGE Sbjct: 244 SAIAHGRKVVLNGRSMEANVGVARELGFIRLDGDDLVTVKSIKNHERHRLCIISTGSQGE 303 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P S+L +++ E R++ L D VI SS+ IPGNE AI + N L E+GV V+ E Sbjct: 304 PNSSLMRIAHQEHRDIILGAGDMVILSSKFIPGNERAIWSLINLLYERGVEVVHEKDNPH 363 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNGKML 422 +HVSGH +DLK M +P+ + +HGEP HL H++LAL G+A + NG ++ Sbjct: 364 IHVSGHAPADDLKTMLALTKPRFFIPMHGEPRHLHLHRKLALAMGVAEERSLVMENGDLV 423 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFG 481 L P+ I IID V HG DG +G D+ + RR LS G + V +++ + Sbjct: 424 ELTPNHISIIDRVEHGRVFVDGKGVGDICDIVMRDRRHLSEDGMVVVVMVVAKDGGQLLE 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTV---VDLPQFRRKDLKLLRESISSALRSLL 538 PEI+ G+ ++ + ++ + + +TV + F + + ALR Sbjct: 484 GPEILTRGV-IHEDENPQMLEEMRETVAQALAIGAKGMDFNEDEQVGASDIAVRALRRFF 542 Query: 539 KKVWGKKPLVTVFINKI 555 KK G++P+V + ++ Sbjct: 543 KKRLGRRPVVLPMVMEM 559 >gi|33241261|ref|NP_876203.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238791|gb|AAQ00856.1| Metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 647 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 169/564 (29%), Positives = 299/564 (53%), Gaps = 18/564 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD +++ Sbjct: 12 KEPSLRVIPLGGLHEIGKNTCVFEYG----DELMLVDAGLAFPSDGMHGVNVVMPDTSYL 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 68 RENQKRIRGMIVTHGHEDHIGGISHHLKHFNIPVIYGPRLAMSMLQGKMEEAGVTDRTTI 127 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG +FS+E +R HS+ ++ +L I++PVG ++ TGD+K D + G+ D Sbjct: 128 QTVGPRDVVKVGQSFSVEFIRNTHSMADSFSLAIKTPVGTVIFTGDFKFDHTPVDGEHFD 187 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G EG+L L DSTNA G C SE+ + + + A+G V++TTF+SS+ R Sbjct: 188 LARLAKHGEEGVLCLFSDSTNAEVPGWCPSERTVFPALERHVAEAEGRVIITTFASSIHR 247 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G +K D+LF+ + P + +++ Sbjct: 248 VAMILELALKHGRKVGLLGRSMLNVIAKAREIGYMKAPDELFVPIKQIRDLPDRETLLLM 307 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRG+ ++V++ DT+IFS+ IPGN +++ + +RL++ G +VI Sbjct: 308 TGSQGEPLAALSRISRGDHQHVQVKTTDTIIFSASPIPGNTISVVNTIDRLMQLGAKVIY 367 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M +P+ V +HGE LV H + A G+ + + Sbjct: 368 GKGEG-IHVSGHGFQEDQKLMLALTKPKYFVPVHGEHRMLVCHSKSAQSMGVPENNILLL 426 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG +++L P+ I V G+ L D G + +R+QL+ G +++ V + Sbjct: 427 ENGDVVQLTPNSITRGQPVKAGIELLDASRNGIVDARVLKERQQLAEDGVITLLVAVSTD 486 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK--------DLKLLRE 528 + P + G+ + + Q R+ D + Sbjct: 487 GVMVAPPRVNLRGVVTTAEPRKMSLWTEKEIIWVLQNRWKQLSRQVSANSVEVDWIGFQR 546 Query: 529 SISSALRSLLKKVWGKKPLVTVFI 552 + S L +++ + +PL+ + Sbjct: 547 EVESGLARRMRREFQVEPLILCLV 570 >gi|332686677|ref|YP_004456451.1| Zn-dependent hydrolase [Melissococcus plutonius ATCC 35311] gi|332370686|dbj|BAK21642.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Melissococcus plutonius ATCC 35311] Length = 561 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 147/562 (26%), Positives = 262/562 (46%), Gaps = 13/562 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + +PLGGV E G NM + G + ++DCG+ +P++DL G+D+V PD T++ + Sbjct: 2 DTIKIIPLGGVRENGKNMYITEVG----EEIFVLDCGLKYPENDLLGIDIVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCIS 122 R + +F+TH H D GAL L S L +PV+ + I L + Sbjct: 58 NRDRIAGVFLTHGHADAIGALPYLLSKLKIPVFGTKLTIELAKLNIHGHSGRENFDDFHI 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D ++ R H+IP+++ + +++ G+IV+TGD+K D AI TD Sbjct: 118 IDEHTEIDFANTTVSFFRTTHTIPDSVGISLKTSEGSIVYTGDFKFDPSAIPMYQTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG E +LAL+ DS+NA SE+ I ++D ++ G ++V ++++ R++ Sbjct: 178 LAEIGKENVLALLSDSSNAENPEQIASERQIADEVFDTIRYWDGRIIVACVANNLQRVQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATG 300 I++ A Q RKIVL G +V+ +AI ++ L +S + Y EQL+++ TG Sbjct: 238 ILNAAHQSKRKIVLRGQDFTKVIHLAIQAEKLQLPSEDLIISIKEMEKYQPEQLLILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP AL +++ ++ + E D V ++ E + +N + G V Sbjct: 298 RMGEPLEALQKMADNPQEDIHIQEGDLVYITTTPSTAMETTVAKTENIVYRAGGIVK--L 355 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + VSGH P+ L+ M +++P+ + I GE L AH +LA + I + Sbjct: 356 ISSDLCVSGHANPDGLQLMLNFMKPKYFIPIQGEYRQLAAHADLAYELAIPYKNIFITGR 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + V + DG +G ++ + RR LS G + ++ Sbjct: 416 GDVLEYKNNQMNVAGSVPAENIMIDGLGVGDIGNIVLRDRRILSEDGIFVAVITINRKEK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I +I G Y + K + V + L++ I L Sbjct: 476 RIVSPAKITSRGF-VYVKASKDLMKESSNMITEIVEKHLANDDFEWSKLKQDIRENLSHY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L + ++P++ I +I+++R Sbjct: 535 LFEQTKRRPVILPVIMEINQKR 556 >gi|56552762|ref|YP_163601.1| beta-lactamase domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241762498|ref|ZP_04760575.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753508|ref|YP_003226401.1| beta-lactamase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544336|gb|AAV90490.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373000|gb|EER62667.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552871|gb|ACV75817.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 546 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 213/557 (38%), Positives = 334/557 (59%), Gaps = 13/557 (2%) Query: 1 MKN--EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK +EL+FL LGG GEIGMN LYG KW+M+D G++F PGV+++ PDI Sbjct: 1 MKRPGKELLFLALGGSGEIGMNANLYG----CDGKWVMVDLGITFGDASYPGVEVILPDI 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 FI + K+L+ I ITH HEDH GA+ L + L VP+YA+PF GL+ +K ER++ K+ Sbjct: 57 EFIEERAKDLLGIVITHGHEDHIGAIPYLAADLGVPIYATPFTAGLIRSKLQEERIADKV 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + +G+F + + HSIPE AL+I +P GN+ HTGDWKLDDD ++G+ T Sbjct: 117 KLHVIENNGRFKLGSFRFNYIPLAHSIPEGNALLIETPYGNVFHTGDWKLDDDPLVGNTT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + L IG+ G+LAL+CDSTN+ E T SE ++K + ++++ A G VLVTTF+S+ + Sbjct: 177 NAKMLRKIGDNGVLALVCDSTNSFNEKTSGSEGDVRKGLDEVIRKAPGRVLVTTFASNAA 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+++ +A+ +GR +V+ G S+++++ +A G ++ LS + P E+++++A Sbjct: 237 RIQTLGQVAQDVGRHLVIAGRSIEKIIKIAQSTGYLQDFPKTLSYDEAMRMPAEKVMIVA 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QGE R+AL++++ ++KL+ D+VIFSSR IPGNE+A+G I+N L +G+R++ Sbjct: 297 TGGQGESRAALSRIAFDSH-HLKLSAGDSVIFSSRQIPGNEMAVGRIQNALAAKGIRMVT 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + + +HVSGHP DL+ MY+WIRP++L+ +HGE H+ L L GI N Sbjct: 356 DR-QAMIHVSGHPGRPDLQAMYRWIRPEMLIPVHGELRHMAEQARLGLATGIPRSLVQGN 414 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++RL P + G L DG +I I +RR+++ G +SV + +D H + Sbjct: 415 GDLIRLAPKGPVFVSHENTGRLLLDGDVILSANGPTIGERRKMAINGLISVGLAVDKHNH 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + G P I G+P + D + + + I V K + +RE++ A+R Sbjct: 475 LKGHPTISLHGVPI-EADRIEFIEDASRAAIKAV----HEGHKSEERMREAVRLAVRRRA 529 Query: 539 KKVWGKKPLVTVFINKI 555 GKKP+V V + Sbjct: 530 HHWTGKKPIVDVVAVHV 546 >gi|118463167|ref|YP_882820.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium avium 104] gi|118164454|gb|ABK65351.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium avium 104] Length = 558 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVMFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH G + L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGGIPYLLKLRPDIPVVGSKFTLALVAAKCREHRL--KPVFVEVS 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G K G F E VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGRKSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNAELPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + L P E++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADADVIDIGAAELMPPERVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D V+ +S IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRHVMPVHGTWRMLRANSKLAARTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGRASISGAVPVGKMFVDGLVDGDVGDITLGERLILS-SGFVAVTVVVQRGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 APPHLHSRGFS----EDPKALEPAVRRVEEELEALVAENITDPSRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|307291168|ref|ZP_07571053.1| hypothetical protein HMPREF9509_01475 [Enterococcus faecalis TX0411] gi|306497822|gb|EFM67354.1| hypothetical protein HMPREF9509_01475 [Enterococcus faecalis TX0411] Length = 562 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + IF+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGIFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPVQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ V + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFVPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|29375760|ref|NP_814914.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227552969|ref|ZP_03983018.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|255973098|ref|ZP_05423684.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|256618768|ref|ZP_05475614.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256762188|ref|ZP_05502768.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256958677|ref|ZP_05562848.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256965415|ref|ZP_05569586.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|257077969|ref|ZP_05572330.1| metallo-beta-lactamase family hydrolase [Enterococcus faecalis JH1] gi|257085556|ref|ZP_05579917.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|257086538|ref|ZP_05580899.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|257089595|ref|ZP_05583956.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257415802|ref|ZP_05592796.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis AR01/DG] gi|257419011|ref|ZP_05596005.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257422904|ref|ZP_05599894.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|294781100|ref|ZP_06746450.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300860070|ref|ZP_07106158.1| putative Ribonuclease J 2 [Enterococcus faecalis TUSoD Ef11] gi|312899656|ref|ZP_07758980.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312903935|ref|ZP_07763104.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|29343221|gb|AAO80984.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227177939|gb|EEI58911.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|255964116|gb|EET96592.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|256598295|gb|EEU17471.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256683439|gb|EEU23134.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256949173|gb|EEU65805.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256955911|gb|EEU72543.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|256985999|gb|EEU73301.1| metallo-beta-lactamase family hydrolase [Enterococcus faecalis JH1] gi|256993586|gb|EEU80888.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|256994568|gb|EEU81870.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|256998407|gb|EEU84927.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257157630|gb|EEU87590.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ARO1/DG] gi|257160839|gb|EEU90799.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257164728|gb|EEU94688.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|294451778|gb|EFG20230.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300850888|gb|EFK78637.1| putative Ribonuclease J 2 [Enterococcus faecalis TUSoD Ef11] gi|310632655|gb|EFQ15938.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311293162|gb|EFQ71718.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315027738|gb|EFT39670.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315031513|gb|EFT43445.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315145496|gb|EFT89512.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315147667|gb|EFT91683.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315162559|gb|EFU06576.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315165402|gb|EFU09419.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315578284|gb|EFU90475.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315579800|gb|EFU91991.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327534810|gb|AEA93644.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis OG1RF] Length = 562 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|315166604|gb|EFU10621.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315172782|gb|EFU16799.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 565 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 146/566 (25%), Positives = 266/566 (46%), Gaps = 14/566 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPVQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +I G Y + K V V + + L++ I Sbjct: 475 RREKRIVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIREN 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + ++++ Sbjct: 534 LSRYLFEQTKRRPVILPVIMEATQRK 559 >gi|293383252|ref|ZP_06629168.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|291079430|gb|EFE16794.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] Length = 565 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 146/566 (25%), Positives = 265/566 (46%), Gaps = 14/566 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +I G Y + K V V + L++ I Sbjct: 475 RREKRIVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLGSDDFEWSKLKQEIREN 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + ++++ Sbjct: 534 LSRYLFEQTKRRPVILPVIMEATQRK 559 >gi|256830142|ref|YP_003158870.1| beta-lactamase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579318|gb|ACU90454.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 550 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 289/559 (51%), Gaps = 13/559 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + PLGG+GEIGMN + + I++DCG+ FP L GVD+V P + F Sbjct: 1 MPESHVTLTPLGGLGEIGMNCMALE----TEQSMILVDCGLMFPDVILYGVDVVIPRMDF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIP 119 I+ + L I +TH HEDH GAL L +L VP+Y S F + L + + + Sbjct: 57 IVSRKHKLKGIILTHGHEDHIGALAWLVPYLQEVPLYGSEFTLRLAMKRLQERNLDSHVK 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +A ++V++G F++ + V HSI E L I +P G IVHTGD+K+D + G TD Sbjct: 117 LHPVRARERVELGEFAVTFMPVCHSIIEGFGLGIETPAGRIVHTGDFKIDRNPQGGHATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D+ +EG+L ++ DSTN REG ++E+ I+ ++ ++ AKG +LVT F++ + R Sbjct: 177 LDAFAKFSSEGVLLMLSDSTNVEREGFSLTEQEIQDSLDEVFAEAKGRILVTLFATHIQR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIA 298 ++ I D+A + GR++ G SL + VA D+G + + E ++++++ Sbjct: 237 MQEIFDLAAKHGRRVAFTGRSLVTNIDVAKDLGHLRFNRENSCDMEELAYLDDDKIVILL 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++R E R + + + DTVI SSR IPGN AI + N L G V+ Sbjct: 297 TGSQGEPLSALSRVARSEHRQINIHKGDTVIMSSRFIPGNTRAITRVINDLYRHGASVLY 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PV 416 E + +H SGH + +L+ M + P+ V +HGE HL H ELA+ GIA + Sbjct: 357 EKVQA-IHASGHAHKEELRIMLDTVHPKFFVPVHGEYRHLFKHAELAVSRGIAPERALIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L I + + V L DG +G + +R+ L G + V ++ D Sbjct: 416 ENGHPVTLSTSGIRLEEAVFAESILVDGKGVGDVGQSVLKERQILGGEGLVIVLLVQDEF 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P I G ++ I + ++ + P + L E I S+LR Sbjct: 476 GTIVFGPSIQSKGF-IFEQHFSHILEDAKCIILDVMEGNPG---CEAYKLEEKIRSSLRR 531 Query: 537 LLKKVWGKKPLVTVFINKI 555 +KV + P+V I ++ Sbjct: 532 FFRKVLERDPIVIPLIARV 550 >gi|323480418|gb|ADX79857.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] Length = 562 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSTAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|41408961|ref|NP_961797.1| hypothetical protein MAP2863c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397320|gb|AAS05180.1| hypothetical protein MAP_2863c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 558 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVMFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH G + L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGGIPYLLKLRPDIPVVGSKFTLALVAAKCREHRL--KPVFVEVS 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G K G F E VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGHKSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNAELPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + L P E++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADADVIDIGAAELMPPERVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D V+ +S IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRHVMPVHGTWRMLRANSKLAARTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGRASISGAVPVGKMFVDGLVDGDVGDITLGERLILS-SGFVAVTVVVQRGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 APPHLHSRGFS----EDPKALEPAVRRVEEELEALVAENITDPSRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|293374243|ref|ZP_06620571.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325845631|ref|ZP_08168915.1| ribonuclease J 2 [Turicibacter sp. HGF1] gi|292647076|gb|EFF65058.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325488329|gb|EGC90754.1| ribonuclease J 2 [Turicibacter sp. HGF1] Length = 583 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 143/563 (25%), Positives = 275/563 (48%), Gaps = 16/563 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ LGG+ E G N+ + + K ++D G+ +P +DL GVD V PD T++ Sbjct: 27 EQKIKVFALGGLDENGKNLYVVE----VNDKIFVLDAGLKYPTEDLLGVDAVIPDFTYLK 82 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-I 121 + + IF++H HEDH GAL L S ++VP+Y + + L+E + K Sbjct: 83 ENVSRVQGIFLSHGHEDHIGALPQLLSLINVPIYGTRLTMALVEDSLSENGLDFKNYKLY 142 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + +++ G + + HSIP+++A+ I + G IV+T D+ D A T+ Sbjct: 143 KIRENNELFFGDIKVTFFKTTHSIPDSVAICIHTTDGVIVYTSDFTFDQSAKGRYQTNYA 202 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + I EG+L L+ +S NA + G + + + + A+G ++ + +SS + RI+ Sbjct: 203 RISEISKEGVLCLLSESINAEKSGHTSTGSSLTYELEEAFSRAEGRIICSLYSSDLHRIQ 262 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS----DESFGLYPREQLIVI 297 +ID+A Q GRKI ++G ++R+V +++ +G ++ + L + L+V+ Sbjct: 263 LVIDLAIQNGRKIAIIGRKMQRIVDISVKLGYLRIPKSALMNLLYIDEKNDNNLSNLVVL 322 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 ATG++ EP +AL ++++ + R + + + DTVI ++ IPGNE+ + L G V+ Sbjct: 323 ATGNRYEPFNALIRMAKHQDRLIHIEKSDTVIVATAPIPGNEIKAARTLDLLYRTGASVV 382 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 + S H DLK M ++PQ ++ + GE +LVAH ++A + G V Sbjct: 383 --AINKNLLPSSHASSEDLKLMMNLLKPQYIMPVIGEYRNLVAHAKIAEKMGYNTENVIL 440 Query: 416 VRNGKMLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + NG ++ + + + L DG +G + + R+ ++ G + V L+ Sbjct: 441 LDNGDVVEFQQGELVNHTEHIQIDQVLVDGLGVGDIGSVVLRDRQLMANDGIIVVIANLN 500 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + I P+IV G Y+ +++ L + V + + + + LR+ + Sbjct: 501 KNTKEIVAGPQIVSKGF-VYEKGNEELYAALDELVRNIIGQFVTEQYVNWQGLRQELRDK 559 Query: 534 LRSLLKKVWGKKPLVTVFINKIS 556 + LL +KP++ + + + Sbjct: 560 IGKLLFNKTKRKPIIIPIVEEFN 582 >gi|224437069|ref|ZP_03658050.1| hypothetical protein HcinC1_03835 [Helicobacter cinaedi CCUG 18818] Length = 712 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 162/551 (29%), Positives = 288/551 (52%), Gaps = 12/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GEIG N+ + + I+ID G+SFP +D+ GVD++ PD +++ + Sbjct: 167 VRITPLGGLGEIGGNITVIE----TQDSAIVIDVGMSFPNEDMHGVDILVPDFSYLFAIK 222 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQ 124 + + ITHAHEDH GA+ L+ L P+Y +P +G++ +K + K + + Sbjct: 223 DKIAGVIITHAHEDHIGAVPYLFKLLQFPIYGTPLPLGMIGSKFDEHGLKKFRSFFKIVE 282 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +GAF +E + + HSI + AL IR+ G I+HTGD+K+D + TD L Sbjct: 283 KRKPIKIGAFEVEWINITHSIIDASALAIRTEAGVIIHTGDFKIDHTPVDNLPTDLHRLA 342 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG++ L+ DSTN+ R G SE + + K A+G V+++TFSS++ R+ I Sbjct: 343 HYGEEGVMLLLSDSTNSHRSGVTPSEASVGPTFETLFKQAQGRVIMSTFSSNIHRVYQAI 402 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + RK+ ++G S+++ + +A ++G I +F+ YP E+++++ TGSQG Sbjct: 403 THGLKYNRKVAVIGRSMEKNLELARELGYIDLPQNIFIEAHEVEKYPDEEVLIVTTGSQG 462 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SAL +++ E R++K+ D VI S++AIPGNE ++ + N L++ G +V +D Sbjct: 463 ETMSALYRMATDEHRHIKIKPSDMVIISAKAIPGNEGSVSTVLNFLMKAGAKVAYQDF-S 521 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 +HVSGH + K M + ++P+ + +HGE H+ HK+ A+ G+ + + +G Sbjct: 522 EIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHIARHKQTAIACGVMEKNILLMEDGDQ 581 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + + P ++ I V +G D + + + + R+ L+ G + ++ + I Sbjct: 582 IEVNPSYMKKIRSVKNGKTFIDNQINRQIENDVVLDRQALASDGIVIISAKISKDRKILE 641 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 +I G+ A D G K + T+ V + + K L + + + + K Sbjct: 642 T-KITSYGLVADKEDKG-FEKEMNDTLEFVVKNFKVEG-FNAKNLENEVHNTFKRHIFKK 698 Query: 542 WGKKPLVTVFI 552 K P + I Sbjct: 699 VKKYPTIVPMI 709 >gi|257082858|ref|ZP_05577219.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|256990888|gb|EEU78190.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|315169867|gb|EFU13884.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 562 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPVQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|256962225|ref|ZP_05566396.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|293387593|ref|ZP_06632139.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|312907160|ref|ZP_07766151.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909779|ref|ZP_07768627.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256952721|gb|EEU69353.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|291082925|gb|EFE19888.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|310626188|gb|EFQ09471.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311289737|gb|EFQ68293.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 562 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 263/561 (46%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLGSDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|254500395|ref|ZP_05112546.1| RNA-metabolising metallo-beta-lactamase family [Labrenzia alexandrii DFL-11] gi|222436466|gb|EEE43145.1| RNA-metabolising metallo-beta-lactamase family [Labrenzia alexandrii DFL-11] Length = 559 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 237/554 (42%), Positives = 356/554 (64%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++VFLPLGGVGEIGMN+ LYG+G +RKW+++DCGVSF +LPG+DLV PDI F+ Sbjct: 7 KENDIVFLPLGGVGEIGMNLGLYGFGPEGNRKWLIVDCGVSFAGPELPGIDLVMPDIKFL 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E N+ + ITHAHEDHYGA+ LW FL VPVYA+ F GLL AK E ++++P Sbjct: 67 EDEVNNIAGMVITHAHEDHYGAILHLWPFLKVPVYATAFTAGLLAAKTESEPGAEEVPVT 126 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + G++ +G F +E V + HSIPE AL IR+P G ++HTGDWK+D +G D D Sbjct: 127 VVRQGERHTIGPFDVEFVAMAHSIPEPCALAIRTPAGLVLHTGDWKIDLSPGIGQPIDLD 186 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G EG++AL+CDSTNA+R+G SE + + ++ AK V VTTF+S+V+RIR Sbjct: 187 RLAELGREGVMALVCDSTNAVRDGVSPSEADVAAELTKVIGRAKHRVAVTTFASNVARIR 246 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I A R +V++G S+ R + VA ++ + F +E++G PR++++++ TGS Sbjct: 247 AIARAAAANERDVVVVGRSMHRAIEVANELEYMDDLPAFHDEEAYGYLPRDKVVLLCTGS 306 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+ALA+++ G+ RN+ LA+ D VIFSSR IPGNE +G + N L ++ V ++ + Sbjct: 307 QGENRAALARIAAGDHRNIALAQGDMVIFSSRTIPGNEKEVGAVLNNLADKDVEIVTDK- 365 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +L+++Y+ ++P+V++ +HGEPLHL AH A ++G+ V +NG + Sbjct: 366 DALVHVSGHPRRGELEQLYKLVQPKVVLPVHGEPLHLAAHAAFAKEQGVPEVIRGKNGDV 425 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL IIDE G+ +KDG ++ G+ +RR+LSF G + ++++ + Sbjct: 426 IRLVAGRAAIIDEAPFGILVKDGRILDDPEVTGVKERRKLSFAGAAIITLVVNRSGELLD 485 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P V +G+P D DG + ++ K VI V +P+ RRKD L+ E+ A RS + V Sbjct: 486 EPNAVLLGLPDTDDDGEPMEDIVRKAVIGAVTSIPKARRKDKDLIAEAARRAARSEILDV 545 Query: 542 WGKKPLVTVFINKI 555 WGKK L V + ++ Sbjct: 546 WGKKTLCKVVVTQL 559 >gi|226306220|ref|YP_002766180.1| hypothetical protein RER_27330 [Rhodococcus erythropolis PR4] gi|226185337|dbj|BAH33441.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 530 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 160/540 (29%), Positives = 277/540 (51%), Gaps = 16/540 (2%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M ++ + K +++DCGV FP+D PGVDL+ PD +I ++ A+ +TH HEDH Sbjct: 1 MTVFEH----RGKLLIVDCGVLFPEDQQPGVDLILPDFRYIEDRMDDVEAVILTHGHEDH 56 Query: 81 YGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 GAL L +PV + F + L+ AK R+ + + G+ G F E Sbjct: 57 IGALPFLLRLRADIPVIGAKFTLALVAAKCREHRLRPNLVEVV--EGNTTTHGPFDCEYF 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 VNHSIP+ +A+ IR+ G ++HTGD KLD + G +TD +G+EG+ + DST Sbjct: 115 AVNHSIPDALAIAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVDLFLVDST 174 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 NA G E+ I + +++ AK V+V +F+S V RI+ ++D+A + R+IV +G Sbjct: 175 NAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVVDVAARYNRRIVFVGR 234 Query: 260 SLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 S+ R + +A D+G + D L + ++ P ++L++I+TGSQGEP +AL++++RGE R Sbjct: 235 SMVRNMQIAQDLGYLTVPDGLVVDIDTAATLPDDRLVLISTGSQGEPLAALSRMARGEHR 294 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + + D V+ +S IPGNE ++ + N L ++G V+ + + VHVSGH +L Sbjct: 295 QINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQS-AKVHVSGHASAGELLY 353 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVV 436 +Y +RP + +HGE HL A+ LA G+ + +G ++ + EI+ V Sbjct: 354 LYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVVVDMVDGLAEIVGRVP 413 Query: 437 HGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDG 495 G DG +G + ++ R L G +++ ++++ PE+ G Sbjct: 414 VGHVYVDGLSVGDVGEPTLSDRLVLGEGGFIAITIVINESTGRAVSTPEVSGRGFS---- 469 Query: 496 DGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 D K V + + L D + +S+ + + + ++P++ + + Sbjct: 470 DDPTALKAAADLVESDLARLASEGVIDAHRIAQSVRRVVGRWVADKYRRRPMIIPTVIAV 529 >gi|307942134|ref|ZP_07657485.1| ribonuclease J [Roseibium sp. TrichSKD4] gi|307774420|gb|EFO33630.1| ribonuclease J [Roseibium sp. TrichSKD4] Length = 558 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 234/554 (42%), Positives = 354/554 (63%), Gaps = 1/554 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E+VFLPLGGVGEIGMN+ LYG G R W+++DCGVSF DLPG+D+V PDI F+ Sbjct: 6 NKNEIVFLPLGGVGEIGMNLGLYGVGPEGDRSWLIVDCGVSFAGPDLPGIDVVLPDIRFL 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +E N++ + ITHAHEDHYG + LW L VP+Y +PF GLLE+KR + P Sbjct: 66 EEEVDNIVGMVITHAHEDHYGGIVHLWPQLRVPMYMTPFTAGLLESKREMDSNEDSFPIT 125 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + GD++D+G F +E + + HSIPE AL IR+ G ++HTGDWK+D +G D Sbjct: 126 VVRQGDRIDIGPFDVEFIAMAHSIPEPCALAIRTSSGMVLHTGDWKVDHTPGIGLPIDMK 185 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G EG+ AL+CDSTNA+REG SE + + ++ AK V VTTF+S+V+RIR Sbjct: 186 RLEELGKEGVTALVCDSTNAIREGVSPSEADVAVELKKVISGAKHRVAVTTFASNVARIR 245 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I + + R +V++G S+ R + VA ++G + + F +E+FG PRE+++++ TGS Sbjct: 246 AIAEATQAADRDLVVVGRSMHRAIDVAGELGYLDGLKPFHDEEAFGYLPREKVVLLCTGS 305 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+A+A+++ G+ RN+ ++ D VIFSSR IPGNE A+ + N L E ++++ + Sbjct: 306 QGEARAAMARIAAGDHRNIAFSKGDMVIFSSRTIPGNEKAVIDVMNNLAEDDIQIMTDR- 364 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + VHVSGHP +L+++Y+ ++P+V+V +HGEP+HL AH + A G+ V RNG + Sbjct: 365 DALVHVSGHPRRGELEQLYKLVKPKVVVPVHGEPMHLAAHADFAKSMGVREVMRARNGDI 424 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 +RL IIDE G+++KDG ++ G+ +RR+LSF G V+++++ + Sbjct: 425 VRLNEGAAGIIDEAPFGIWVKDGHILDDPEVTGVKERRKLSFAGAAVVSLVVNRSGELLD 484 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + +GIP D +G I ++ K VI V +P+ RRKD L+ E+ A RS + +V Sbjct: 485 DPHVTLMGIPEEDEEGDPIEDIVAKEVIGAVTSVPKARRKDKDLIGEAARRAARSAILEV 544 Query: 542 WGKKPLVTVFINKI 555 WGKK L V ++++ Sbjct: 545 WGKKTLCKVVVSQV 558 >gi|291296201|ref|YP_003507599.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290471160|gb|ADD28579.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 576 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 171/554 (30%), Positives = 283/554 (51%), Gaps = 18/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG GEIG N+ Y + +ID G++FP + GVD+V P I ++++ + Sbjct: 35 VEIVFLGGTGEIGKNITAVRY----EDEMFIIDGGLAFPDARMLGVDIVIPRIDYLVQNK 90 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-KKIPCISF 123 + +TH HEDH GAL L+ L VPVY + +GL++ K + Sbjct: 91 DLIRGWVLTHGHEDHIGALPYLFPQLPRVPVYGAKLTLGLVKGKLEEFGLPVGDYNFKEV 150 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D++ +G F ++ R+ HSIP+ ++I +P+G IVHTGD+KLD+ I G + + Sbjct: 151 SPDDRISIGRYFQLDLFRMTHSIPDNFGMIIHTPIGRIVHTGDFKLDERPIDGQTSHLEK 210 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + G EG+L L+ DSTN R G SE + + + ++ AKG + VTTF+S + RI+S Sbjct: 211 IAQAGAEGVLCLIADSTNGERPGVTPSESEVAEELDKVIGAAKGRIFVTTFASHIHRIQS 270 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 ++ E+ GRKI + G S+ + +A+++G K+ F + + P EQ++VI TGSQ Sbjct: 271 VVTAGEKYGRKIAVEGRSMLKYARIALELGYFKQKDRFYTLDEIKDLPDEQVLVITTGSQ 330 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P + LA+L+ G + + E DTVI SS IPGNE A+ + N+L G V Sbjct: 331 GQPEAVLARLAAGAHSKMAIKEGDTVILSSSPIPGNEEAVNTVINQLYALGAYVFYPPR- 389 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH +LK + RP+ L+ HGE H V K LA + NG+ Sbjct: 390 YRVHASGHASHEELKTVLNLARPKFLMPWHGEIRHQVNFKWLAQSIPHPPEKILIPENGR 449 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL + IE V HG DG +G D + R ++ G + + L+ Sbjct: 450 LIRLTANNIEFNGTVPHGQLYVDGLGVGDITDEILEDRHHMAAEGVVIITALVSRD---- 505 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + E++ G G ++ + K + + + +++ L+ +R+ I ++ + K Sbjct: 506 PLVEVISKGFV---KAGERLLGEVRKMAMDALYRGVREKKR-LEEIRDDIYYPVKKFIAK 561 Query: 541 VWGKKPLVTVFINK 554 G+ P++ + + Sbjct: 562 NTGRNPVILPIVIE 575 >gi|255976137|ref|ZP_05426723.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|307279003|ref|ZP_07560061.1| hypothetical protein HMPREF9515_01319 [Enterococcus faecalis TX0860] gi|255969009|gb|EET99631.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|306504128|gb|EFM73340.1| hypothetical protein HMPREF9515_01319 [Enterococcus faecalis TX0860] Length = 562 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPIIMEATQRK 556 >gi|148543881|ref|YP_001271251.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184153281|ref|YP_001841622.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|325682586|ref|ZP_08162103.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|60172714|gb|AAX14548.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri] gi|148530915|gb|ABQ82914.1| beta-lactamase domain protein [Lactobacillus reuteri DSM 20016] gi|183224625|dbj|BAG25142.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|324978425|gb|EGC15375.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 593 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 149/562 (26%), Positives = 264/562 (46%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ Sbjct: 2 DNNIKIIPFGGVRENGKNMYAVEI----EDQIFILDTGLKYPENELMGIDVVIPDWEYLR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CI 121 + + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 58 EHKDKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKNHKEVKKFNDFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD Sbjct: 118 VVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKKGYQTDLA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+LAL+ DS A G E+ I I + K G ++V + +S++ R++ Sbjct: 178 RLAEIGSQGVLALLSDSAGAGITGASAREQDIGDYIKETFKYQNGRIIVASVASNIMRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A +GRKIVL G +++++ A+ +G + D LF+S + Q++++ TG Sbjct: 238 QIINAAVAVGRKIVLSGKDIEQIIDTAMSLGKLHLPDDLFISRKEAEKLEPNQVVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L Q++ G+ N++L D V ++ E + K+ + G V Sbjct: 298 KMGEPIKSLQQIANGDNPNLQLTSTDLVFVTTTPSYAQETEVQKTKDMIYRTGAEVKFIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + ++ SGH ND + M +++P+ + I GE L H ELA + GI + V Sbjct: 358 DD--LNPSGHANQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPKENIFLVNK 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + + DG +G ++ + RR LS G V +D Sbjct: 416 GDVLTYKNGKFHVGEHIDVSNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G + ++ + V V + + D L++ + L Sbjct: 476 KIVARPQITSRGF-VFVKTNRQLMQQSADLVEKIVQENLDQKEFDWSHLKQDVRDKLNRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L + P++ I +I++ + Sbjct: 535 LFDQTKRHPVILPVIMEINQHQ 556 >gi|313680574|ref|YP_004058313.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] gi|313153289|gb|ADR37140.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] Length = 571 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 290/555 (52%), Gaps = 18/555 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +PLGG+GEIG N+ + Y + +++D G++FP++ +PGVD++ P I ++++ Sbjct: 29 KLEIVPLGGMGEIGKNITAFRY----EDEILVVDGGLAFPEEHMPGVDILIPRIDYLVEN 84 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCIS 122 + +TH HEDH G + L L +P+Y + +GLL K + + Sbjct: 85 AGLIKGWVLTHGHEDHIGGMPFLLPQLPKIPLYGAKLTLGLLRGKLEEFGLKPGEFDLNV 144 Query: 123 FQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + +G F+++ R+ HSIP+ L+IR+PVGN+VHTGD+KLD + G V+ Sbjct: 145 VSPDETLKIGRHFTVDLFRMTHSIPDNSGLIIRTPVGNVVHTGDFKLDPTPVDGKVSHLA 204 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + G EG+L L+ DSTNA R G SE + + + A+G V VTTF+S + R++ Sbjct: 205 KVAQAGAEGVLLLIADSTNAERPGITPSEAEVAVALDAAIGAAEGRVFVTTFASHIHRVQ 264 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 S+I AE+ GRK+ + G S+ + +A+++G ++ + + P +++V+ATGS Sbjct: 265 SVIRAAERHGRKVAMEGRSMLKFAKIALELGYLEVKDRLYTTDEIKDIPDREVLVLATGS 324 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QG+P + L++L+ G + + E DTVI SS IPGNE A+ + N+L E G V+ A Sbjct: 325 QGQPMAVLSRLAFGRHAKLSVGEGDTVILSSSPIPGNEEAVNRVINKLYELGAHVLYPPA 384 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV--PPVRNG 419 VH SGH +L+ +Y ++P+ V HGE H K L + V NG Sbjct: 385 -YKVHASGHASREELRFLYNLVQPKFFVPWHGEVRHQTNFKWLVEKMPKPPVKTIVPENG 443 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L L D ++ V G DG +G D + +R+ ++ G + + L+ Sbjct: 444 DVLVLTADDLKKTGRVKAGALYVDGLGVGDITDDILEERQAMAADGIVILTALVSEQ--- 500 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 V E+V G G ++H + + + + + ++ L+ +R+ + + ++ Sbjct: 501 -PVVEVVSRGFV---KAGQRLHAEIRRVALEAIERGVREKKP-LEQIRDDVYYPAKKFIR 555 Query: 540 KVWGKKPLVTVFINK 554 K G+ P++ + + Sbjct: 556 KATGRDPILIPILFE 570 >gi|227529057|ref|ZP_03959106.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus vaginalis ATCC 49540] gi|227351069|gb|EEJ41360.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus vaginalis ATCC 49540] Length = 597 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 151/558 (27%), Positives = 264/558 (47%), Gaps = 12/558 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ K + Sbjct: 4 IKIIPFGGVRENGKNMYAVEI----ENQIFILDAGLKYPENELMGIDVVIPDWEYLKKRK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISFQ 124 +++ +F+TH H D GAL VPV+ S I L + + KK Sbjct: 60 NDIVGVFLTHGHADAIGALPYFLMDFDVPVFGSEMTIALAKLAVKGHKEVKKFNDFHVVD 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +D ++ H+IPET+ +V+ + GNIV+TGD+K D A G TD L Sbjct: 120 ESTAIDFNDVTVSFFATTHTIPETLGIVLETSEGNIVYTGDFKFDQTASTGYQTDLARLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG++G+LAL+ DS A G EK I + I + K KG ++V + +S++ R++ II Sbjct: 180 EIGSQGVLALLSDSAGAGITGASAREKDIGEYILETFKYQKGRIVVASVASNIMRVQQII 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 D A ++GRK+VL G +++++ A+ +G +K L +S E +Q++++ TG G Sbjct: 240 DAAVKVGRKLVLSGEDIEQIIDTAMQLGKLKLPKDLLISMEEANDLEPDQVVILETGKMG 299 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +L Q++ G+ + L++ D V ++ E + K+ + G V + Sbjct: 300 EPIKSLQQIANGDNPKLHLSDSDLVFVTTTPSYAQETEVQKTKDMIYRTGAEVKFISDD- 358 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 ++ SGH ND + M +++P+ + I GE L H ELA + GI + V G + Sbjct: 359 -LNPSGHANQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGIPAENIFIVNKGDV 417 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIF 480 L + + + + DG IG ++ + RR LS G V +D + I Sbjct: 418 LTYKNGKFHVGEHIDVANTMIDGTGIGDIGNIVLRDRRVLSEDGIFVVVATIDRKNKKIV 477 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+I G + ++ K V V + + D L++ + L L Sbjct: 478 ARPQITSRGF-VFVKTNRQLMKQSADLVEKVVQENLDQKEFDWGHLKQDVREKLNRFLFD 536 Query: 541 VWGKKPLVTVFINKISRQ 558 + P++ I ++++ Sbjct: 537 QTKRHPVILPVIMEVNQN 554 >gi|103486779|ref|YP_616340.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] gi|98976856|gb|ABF53007.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] Length = 544 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 204/552 (36%), Positives = 311/552 (56%), Gaps = 13/552 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FL LGG GEIGMN LYG KWIM+D GV+F D PG+D+V PD+ FI Sbjct: 6 KELLFLALGGSGEIGMNANLYG----CDGKWIMLDLGVTFGSHDYPGIDIVMPDLEFIED 61 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +K+L+ I +TH HEDH GA+ L + L VP+YA+ F GL+ K E + ++ Sbjct: 62 RKKDLLGIILTHGHEDHIGAIPYLAADLGVPLYANRFTAGLIAHKLAEEGLEGEVEIKVI 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D +G F I V + HSI E A+VI +P G + HTGDWKLD++ ILG +L Sbjct: 122 DIDDSFRIGPFGIRMVPLAHSILEMSAVVIDTPYGRVFHTGDWKLDEEPILGVPATAAAL 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG+EG+ L+CDSTNA SE +++ + + AKG V+VTTF+S+ +R+ ++ Sbjct: 182 SAIGDEGVDFLVCDSTNAFNAEASGSEGALREGLEQAVGAAKGRVVVTTFASNAARLATL 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A GR + + G SL R++ VA VG + + + PR++++V+ATG QG Sbjct: 242 GEVARATGRSLCVAGRSLDRILGVARSVGYLTDFPPTVDFDEAMRLPRDKVMVVATGGQG 301 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EPR+ALA+++ +KL DTV+FSS+ IPGNEVAIG I N+L + V + E + Sbjct: 302 EPRAALARMAADGH-QIKLEAGDTVVFSSKQIPGNEVAIGRIMNQLAAKDVLTVTEK-QA 359 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 +HVSGHP +L +Y W+RP+++V +HGE H+ AL+ G+ NG ++R Sbjct: 360 HIHVSGHPGKPELAALYGWLRPRLVVPVHGEIRHMHEQARFALETGVPDTLVQENGDLVR 419 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 L P +I++ V G + DG +I +++RR+L+ GH++V + + Sbjct: 420 LAPGAAQIVERVRSGRLILDGDVILPADGETMSERRKLALNGHVTVAAVFSGKNFVDSA- 478 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 I G+P + + + + +D + LRE+I +R + G Sbjct: 479 -ISYRGVPV-EDEREAFIDEMREAAEQA----ATGPARDEEKLREAIRLGVRRIATDWTG 532 Query: 544 KKPLVTVFINKI 555 KKP+V V + +I Sbjct: 533 KKPVVDVMLVEI 544 >gi|317968355|ref|ZP_07969745.1| hydrolase of the metallo-beta-lactamase superfamily protein [Synechococcus sp. CB0205] Length = 662 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 294/565 (52%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +++ Sbjct: 13 KQPHLRVIPLGGLHEIGKNTCVFEYG----DDIMLVDAGLAFPSDGMHGVNVVMPDTSYL 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 69 KENQKRIRGMIVTHGHEDHIGGISHHLKNFNIPVIYGPRLAMSMLQGKMEEAGVTDRTTI 128 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG I+ TGD+K D + G+ D Sbjct: 129 QTVGPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTIIFTGDFKFDHTPVDGEYFD 188 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L DSTNA G C E+ + + + A+G V++TTF+SS+ R Sbjct: 189 MARLAHHGEQGVLCLFSDSTNAEVPGFCPPERSVFPALDRHIAQAEGRVIITTFASSIHR 248 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 249 VAMILELAMKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQIRDLPDRETLLLM 308 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 309 TGSQGEPLAALSRISRGEHPQVQVKSSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 368 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M RP+ V +HGE LV H + A G+ + + Sbjct: 369 GKGEG-IHVSGHGFQEDQKLMLALTRPKFFVPVHGEHRMLVCHSKTAQSMGVPADNMLII 427 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L D I+ + V G+ L D G + +R+QL+ G +++ ++ Sbjct: 428 DNGDVVELTADSIKKGEPVKAGIELLDASRNGIVDARVLKERQQLADDGVITMLAVISTD 487 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 488 GVMAAPPRVNLRGV-VTAADPRKLSLWTEREITWVLENRWQQLSRNTGGKAPEVDWMGVQ 546 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 I L+ L++ +PL+ + Sbjct: 547 REIEVGLQRRLRRELQVEPLIICLV 571 >gi|212704951|ref|ZP_03313079.1| hypothetical protein DESPIG_03018 [Desulfovibrio piger ATCC 29098] gi|212671615|gb|EEB32098.1| hypothetical protein DESPIG_03018 [Desulfovibrio piger ATCC 29098] Length = 554 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 183/563 (32%), Positives = 291/563 (51%), Gaps = 17/563 (3%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M + E L PLGG+GEIG+N L+ + +M+DCG+ FP D GVD+V P Sbjct: 1 MSDSEQFLTVTPLGGLGEIGLNCQLWETSAGV----VMVDCGLMFPDDFHLGVDVVIPHF 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKK 117 + R L+ I +TH HEDH GAL L L +Y S F + L+E K + Sbjct: 57 GAVSAVRDKLLGIVLTHGHEDHIGALPWLVPQLRGTRIYGSYFTLALVEHKLREHELLDW 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + GD+V +G + V HSIPE L + +PVG IVH+GD+K+D + G Sbjct: 117 VELCPVEPGDQVALGDMTFHFFPVCHSIPEGFGLGVETPVGRIVHSGDFKIDPQPLAGSG 176 Query: 178 TDKDSLCAI-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 TD + G EG L DSTN R+G ++E+ + +++ + A G ++VT FSS Sbjct: 177 TDLATFRDFAGPEGARLLFSDSTNVERDGRSLTERAVMESLGKVFDEAPGRIVVTLFSSH 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLI 295 + RI+ + D+A + GR +V+ G SL + +A D+GI K F + + P EQL+ Sbjct: 237 IQRIQEVFDLARERGRTVVISGKSLANNIEMARDLGIAKLPPSFFNAHNGVPDLPDEQLV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ TG+QGEP SAL+++ G R + + + DTV+ SSR IPGN A+ + N + G Sbjct: 297 LVVTGAQGEPLSALSRMVLGGHRQLSIRKGDTVVMSSRMIPGNVKAVSRLINEMYRLGAT 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACV 413 V+ E +H SGH + ++L+ + +RP+ V +HGE HL H +LA + G+ V Sbjct: 357 VLYESVRA-IHASGHAHRDELRELLGAVRPEYFVPVHGEYRHLFKHGQLARECGVKPDNV 415 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + +G L L PD I + V L DG +G + +RR L G + V ++L Sbjct: 416 VLLEDGCPLTLLPDGIRLEPPVPVECTLVDGKGVGDVGSAVLRERRILGDEGMVIVVLVL 475 Query: 474 D-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 D ++ PE+ G ++ + + V+ + + R L L+E I + Sbjct: 476 DAETGSVLHGPEMFSKGF-VFEQHYSHVLEDAKCLVLDEIESV---RPGQLTRLQEGIRA 531 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 +LR ++V + P+V ++++ Sbjct: 532 SLRRFFRRVLERDPVVVPIVSEV 554 >gi|227544999|ref|ZP_03975048.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri CF48-3A] gi|300909966|ref|ZP_07127426.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] gi|227185016|gb|EEI65087.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri CF48-3A] gi|300892614|gb|EFK85974.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] Length = 593 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 148/562 (26%), Positives = 264/562 (46%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ Sbjct: 2 DNNIKIIPFGGVRENGKNMYAVEI----EDQIFILDTGLKYPENELMGIDVVIPDWEYLR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CI 121 + + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 58 EHKNKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKNHKEVKKFNDFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD Sbjct: 118 VVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKKGYQTDLA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+LAL+ DS A G E+ I I + K G ++V + +S++ R++ Sbjct: 178 RLAEIGSQGVLALLSDSAGAGITGASAREQDIGDYIKETFKYQNGRIIVASVASNIMRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A +GRKIVL G +++++ A+ +G + D LF+S + Q++++ TG Sbjct: 238 QIINAAVAVGRKIVLSGKDIEQIIDTAMSLGKLHLPDDLFISRKEAEKLEPNQVVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L Q++ G+ N++L D V ++ E + K+ + G V Sbjct: 298 KMGEPIKSLQQIANGDNPNLQLTSTDLVFVTTTPSYAQETEVQKTKDMIYRTGAEVKFIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + ++ SGH ND + M +++P+ + I GE L H ELA + G+ + V Sbjct: 358 DD--LNPSGHANQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGVPKENIFLVNK 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + + DG +G ++ + RR LS G V +D Sbjct: 416 GDVLTYKNGKFHVGEHIDVSNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G + ++ + V V + + D L++ + L Sbjct: 476 KIVARPQITSRGF-VFVKTNRQLMQQSADLVEKIVQENLDQKEFDWSHLKQDVRDKLNRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L + P++ I +I++ + Sbjct: 535 LFDQTKRHPVILPVIMEINQHQ 556 >gi|86357254|ref|YP_469146.1| putative metallo-beta-lactamase family protein [Rhizobium etli CFN 42] gi|86281356|gb|ABC90419.1| putative metallo-beta-lactamase family protein [Rhizobium etli CFN 42] Length = 537 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 304/538 (56%), Positives = 406/538 (75%), Gaps = 2/538 (0%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 MN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ ERKNL AI ITHAHE Sbjct: 1 MNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFLASERKNLKAIIITHAHE 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDKVDVGAFSIE 137 DHYGAL DLW L+VPV+AS F GLLEAKR +E+ + ++P F+AGD ++VG FSIE Sbjct: 61 DHYGALADLWPGLNVPVFASAFTSGLLEAKRNFEKATIGEVPVTPFKAGDTINVGPFSIE 120 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V VNHSIPE M+L+IR+P GN++HTGDWK+D + LG +TD+ +G+EG+LALMCD Sbjct: 121 GVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLTDETRFRQLGDEGVLALMCD 180 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STNA+R+G SEK + +++ I+++A+G V +TTFSS+V RIR++ + AE GR+++LL Sbjct: 181 STNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRIRTVAEAAEAAGREVLLL 240 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 GSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TGSQGE R+ALA+LSR EM Sbjct: 241 GSSLKRVVDVASDIGLMEGVKPFISEEEYGYIPRDKVVVILTGSQGEARAALAKLSRDEM 300 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 RNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + E VHVSGHP N+L+ Sbjct: 301 RNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD-TEALVHVSGHPRRNELQ 359 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 RMY+W RP+++V +HGE HL AHKELA Q GIA VP VRNG +LRL P P+E+I E H Sbjct: 360 RMYEWTRPKIVVPVHGEATHLTAHKELAEQSGIAIVPRVRNGDILRLAPGPVEVIGEAPH 419 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 G KDG LIG F ++GI +R++LS+VGH++VNV+LD Y+I G P++V IG+P YD +G Sbjct: 420 GRIYKDGLLIGDFDEMGIGERKKLSYVGHVAVNVVLDARYDILGDPDLVSIGLPVYDDEG 479 Query: 498 GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 ++ L I+ + +P+ RRKD+ +L+E++ A+R+ WGKKP+VT F+ K+ Sbjct: 480 EEMEDTLYDAAISAIESIPRARRKDIDMLQEAVRRAIRAAANHAWGKKPVVTAFVTKV 537 >gi|332637223|ref|ZP_08416086.1| ribonuclease J2 [Weissella cibaria KACC 11862] Length = 653 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 148/564 (26%), Positives = 259/564 (45%), Gaps = 17/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +P GGV E G NM G ++D G+ +P+ DL GVD+V PD ++++ Sbjct: 4 TLSIMPFGGVRENGKNMYAVTVG----EDIFILDAGLKYPESDLLGVDVVIPDFAYLVEN 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + +F+TH H D GAL L S + VPV+ S I L + Sbjct: 60 ADKIAGVFLTHGHADAIGALPYLLSEVKVPVFGSELTIELAKLAVEAEPEAKGFDDYHVV 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +V G ++ H+IPE++ +VI +P G IV+TGD+K+D A+ TD L Sbjct: 120 RGNSEVSFGDVTVSFFETTHTIPESLGIVIETPEGQIVYTGDFKIDTTALPYYRTDLARL 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRS 242 IG +G++A++ D+ G E + + + D + K G ++V +S++ RI+ Sbjct: 180 AQIGAKGVIAVLADAAGTASYGLSAHESELAEYVLDSFRAHKNGRIIVAAVASNIQRIQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID A ++ RKIV+ G+ L++VV A+ + + +LF+S ++ E+ +++ Sbjct: 240 VIDAAYKVDRKIVISGNDLEKVVRTALRLKKLHLPMPENELFVSLKNLSKLAPEETVILE 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L ++++G+ RN+++ E D V ++ E + ++ L G V Sbjct: 300 TGKMGEPIRHLQRMAQGDDRNIQIQEGDLVFITTTPSTAMEGYVARTRDMLFRAGASVKQ 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA--HKELALQEGIACVPPV 416 + SGH D + + ++PQ ++ I GE L A H + V + Sbjct: 360 ISTDKK--SSGHASKEDFQLLLNLLKPQHVIPIQGEYRVLNAAYHAAEQVGYDDDHVWLL 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G LR + + + + G + DG +G + + RR LS G V +D Sbjct: 418 AKGDNLRWDGEQMFLGGSIQVGSTMIDGSGVGDIGSIVLNDRRILSEDGVFIAVVTIDRK 477 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSAL 534 I P+I G Y + + + V TV + + + D L+ S+ AL Sbjct: 478 KKKIVATPKIDSRGF-VYVKTSRDLIREAGELVEKTVAEGIKNTKEFDWGNLKNSVRDAL 536 Query: 535 RSLLKKVWGKKPLVTVFINKISRQ 558 L + +KP++ I + ++ Sbjct: 537 GKFLFEQTRRKPVILPVIMEANQN 560 >gi|329667537|gb|AEB93485.1| hypothetical protein LJP_1163 [Lactobacillus johnsonii DPC 6026] Length = 537 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 151/541 (27%), Positives = 263/541 (48%), Gaps = 13/541 (2%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M Y + I++DCG+ FP+DD+ G++ V D ++++K RK + A+ +TH HEDH Sbjct: 1 MYCVEY----QDEIIIMDCGIKFPEDDMMGINYVISDYSYLVKNRKKIKALVVTHGHEDH 56 Query: 81 YGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 G + L + +PVYA+PFA+ L+ K + + S+ Sbjct: 57 IGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSELHEEHEDTVLKFDKLSVSFF 116 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGNEGILALMCDS 198 R HSIP+T+ + + +P G ++ TGD+K D ++ D + +G EG+LAL+ DS Sbjct: 117 RTTHSIPDTLGIAVHTPEGAVLFTGDFKFDLTPVMNQPAPDFQEMAKLGKEGVLALLSDS 176 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 TNA SE+ + +++DI+ KG ++ TF+S++ R+ + I A GRK+ + G Sbjct: 177 TNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLYRVSTAIKAAVDTGRKVAIFG 236 Query: 259 SSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S++ V ID+G + + + P E+ +++ TGSQGEP +AL++++ G Sbjct: 237 RSMENGVQNGIDLGYLDIPEGTLVDANEINHTPPEKAMILCTGSQGEPLAALSRIADGTH 296 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 R + L DTVIFSS IPGN ++ H+ N+L E G V+ VH SGH + K Sbjct: 297 RQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVVHGKIH-NVHTSGHAGQEEQK 355 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPIEIIDEV 435 M + +P+ + +HGE V H E A ++NG +L L D I + Sbjct: 356 MMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMPKDHTFVLKNGDVLALTRDSSRIAGHI 415 Query: 436 VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYD 494 D ++ + R+ L+ G + V +D H + P+I+ G Y Sbjct: 416 NIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDYKHQRVLAGPDILSRGF-VYM 474 Query: 495 GDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 + ++ K V + ++ + + +R++I L+ L ++P++ + Sbjct: 475 RESTELISQAQKHVYHVLKTEMAKDPQPKENEIRKAIIENLQDFLYSKTERRPMILPMLI 534 Query: 554 K 554 + Sbjct: 535 E 535 >gi|194468436|ref|ZP_03074422.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194453289|gb|EDX42187.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 593 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 148/562 (26%), Positives = 265/562 (47%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ Sbjct: 2 DNNIKIIPFGGVRENGKNMYAVEI----EDQIFILDTGLKYPENELMGIDVVIPDWEYLR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CI 121 + + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 58 EHKDKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKNHKEVKKFNDFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD Sbjct: 118 VVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKKGYQTDLA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+LAL+ DS A G E+ I I + K G ++V + +S++ R++ Sbjct: 178 RLAEIGSQGVLALLSDSAGAGITGASAREQDIGDYIKETFKYQNGRIIVASVASNIMRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A +GRKIVL G +++++ A+ +G + D LF+S + Q++++ TG Sbjct: 238 QIINAAVVVGRKIVLSGKDIEQIIDTAMSLGKLHLPDNLFISRKEAEKLEPNQVVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L Q++ G+ N++L + D V ++ E + K+ + G V Sbjct: 298 KMGEPIKSLQQIANGDNPNLQLTDTDLVFVTTTPSYAQETEVQKTKDMIYRTGAEVKFIS 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + ++ SGH ND + M +++P+ + I GE L H ELA + G+ + V Sbjct: 358 DD--LNPSGHANQNDEQLMLNFMKPKFFIPIQGEYRLLDRHAELAEEVGVPKENIFLVNK 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G +L + + + + DG +G ++ + RR LS G V +D Sbjct: 416 GDVLTYKNGKFHVGEHIDVSNTMIDGTGVGDIGNIVLRDRRVLSEDGIFVVVATIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I G + ++ + V V + + D L++ + L Sbjct: 476 KIVARPQITSRGF-VFVKTNRQLMQQSADLVEKIVQENLDQKEFDWSHLKQDVRDKLNRF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L + P++ I +I++ + Sbjct: 535 LFDQTKRHPVILPVIMEINQHQ 556 >gi|315151369|gb|EFT95385.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 562 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 264/561 (47%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T++ + Sbjct: 3 TIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 59 SERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI TD L Sbjct: 119 DPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ R++ + Sbjct: 179 AEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGS 301 ++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL+++ TG Sbjct: 239 LNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 299 MGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + G Sbjct: 359 N--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 +L + + + DG +G ++ + RR LS G V ++ Sbjct: 417 DILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAGVTINRREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y + K V V + + L++ I L L Sbjct: 477 IVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + ++P++ I + ++++ Sbjct: 536 FEQTKRRPVILPVIMEATQRK 556 >gi|118590022|ref|ZP_01547426.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] gi|118437519|gb|EAV44156.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] Length = 561 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 232/551 (42%), Positives = 353/551 (64%), Gaps = 1/551 (0%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++VFLPLGGVGEIGMN+ LYGYG R W+++DCGVSF +LPG+D+V PDI F+ E Sbjct: 12 DIVFLPLGGVGEIGMNLGLYGYGPEDDRTWLIVDCGVSFAGPELPGIDVVVPDIKFLEDE 71 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 N+ + ITHAHEDHYG + LW FL VPVYA+ F GLL AK E ++++P + Sbjct: 72 VDNIAGMVITHAHEDHYGGILHLWPFLKVPVYATAFTAGLLAAKTESEPGAEEVPVTVVK 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G++ +G F +E V + HSIPE AL IR+P G ++HTGDWK+D +G D D L Sbjct: 132 QGERHKIGPFDVEFVAMAHSIPEPCALAIRTPAGMVLHTGDWKIDRTPGVGLPIDLDRLA 191 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G EG++AL+CDSTNA+R+G SE + + +M A + VTTF+S+V+RIR+I Sbjct: 192 ELGREGVMALVCDSTNAIRDGVSPSEADVAVELRKVMAKASKRIAVTTFASNVARIRAIA 251 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + A R +V++G S+ RV+ VA ++G + + F +E++G PRE+ +++ TGSQGE Sbjct: 252 EAAAANDRDMVIVGRSMHRVIEVAGELGYLDGLKPFHDEEAYGYLPREKTVLLCTGSQGE 311 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 R+ALA+++ G+ RN+ L++ D VIFSSR IPGNE A+G + N L ++ V ++ + + Sbjct: 312 ARAALARIAAGDHRNIALSKGDMVIFSSRTIPGNEKAVGEVLNNLADKDVDIVTDR-DAL 370 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 VHVSGHP +L+++Y+ ++P+V++ +HGEPLHL A A G+ V +NG ++RL Sbjct: 371 VHVSGHPRRGELEQLYKLLQPKVVLPVHGEPLHLAAQAAFAKGLGVPEVVRGKNGDIIRL 430 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPE 484 IIDE G+ +KDG ++ G+ +RR+LSF G + ++++ + P Sbjct: 431 SAGRAGIIDEAPSGILVKDGDILDDPEVTGVKERRKLSFAGAAVIALVVNRAGELLDDPN 490 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGK 544 + +G+P D +G + +++K V V +P+ RRKD L+ E+ A RS ++ VWGK Sbjct: 491 VALLGLPDTDDEGDPMEDIVIKAVRGAVTSIPKSRRKDKDLVAEAARRAARSEIQNVWGK 550 Query: 545 KPLVTVFINKI 555 K L V + ++ Sbjct: 551 KTLCKVMVTQL 561 >gi|301059163|ref|ZP_07200104.1| putative ribonuclease J 1 [delta proteobacterium NaphS2] gi|300446743|gb|EFK10567.1| putative ribonuclease J 1 [delta proteobacterium NaphS2] Length = 528 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 173/530 (32%), Positives = 283/530 (53%), Gaps = 6/530 (1%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 +++D G+ FP D +PGVDLV PD TF+ + R+ L + +TH HEDH GA+ L Sbjct: 1 HDSHMVVVDAGLMFPDDYMPGVDLVIPDFTFLRENREKLKGVILTHGHEDHIGAMPFLLK 60 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 V V+ + F + LL K + + + G+ ++G F +E +RVNHSI + Sbjct: 61 EFPVRVFGTGFTLDLLREKLKEHILPQDADLRTVIPGEIHEIGPFKVEFIRVNHSIVDGA 120 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L + +P G I+H+GD+++D + +TD G +G+LA + DSTNA +EG +S Sbjct: 121 GLALETPDGTILHSGDFRIDPTPVDEQLTDLIRFAHYGEKGVLAFLSDSTNAEKEGCTLS 180 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 E+ +KK + D ++ G ++V +F+S+++RI+ +I +AE+ GRK+V G S+ V +A Sbjct: 181 ERDVKKTLRDYFLSSPGRLIVASFASNITRIQEVISLAEEFGRKVVFNGKSMITNVGIAK 240 Query: 270 DVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 G I + L ++++ P Q++VI TGSQGEP SAL++++R + + +K+ + DT+ Sbjct: 241 KRGFIHYPEDLEIAEKRMNALPDRQVVVITTGSQGEPMSALSRMAREQHKGIKIHKGDTI 300 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVL 388 I SS+ IPGNE AI + N+L G VI E +H SGH +LK + +RP+ Sbjct: 301 ILSSKFIPGNEKAITSVINKLYGLGAEVIYESV-SDIHTSGHARKAELKTLLSLVRPRNF 359 Query: 389 VAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFL 446 + IHGE HLV H ++A G+ V R+G ++R EI + G DG Sbjct: 360 IPIHGEYRHLVKHAKIAFDMGMDEKHVLVARDGDVIRFSEGTGEIAGTIPTGRTFVDGKG 419 Query: 447 IGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLL 505 +G + + R++L G + V ++LD+ I PE++ G ++ G I + Sbjct: 420 VGDIEETVLRDRQKLKRHGMVVVLMVLDDQTGKILYGPEMISRGF-VFEDQGQFILEDAQ 478 Query: 506 KTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 V+ V ++ D K L I L+ V + PL+ I + Sbjct: 479 CIVLEVVDEIETLLPVDCKGLEAEIRKRLKRFFYNVIERNPLIIPTIITV 528 >gi|27467870|ref|NP_764507.1| hypothetical protein SE0952 [Staphylococcus epidermidis ATCC 12228] gi|27315415|gb|AAO04549.1|AE016747_46 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] Length = 572 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 22 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 77 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ + KK+ Sbjct: 78 IENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIALVKEAMKARNIKKKVRYY 137 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 138 TVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKFDQSLHGHYAPDLK 197 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 198 RMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFAKVKGRLIVSCYASNFVRIQ 257 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 258 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVENYPKNEVIIIATG 317 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q++R + + + + E D++ + A EV I N LV G +I Sbjct: 318 MQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIADTLNELVRAGAHII--P 375 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 376 NNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLAAETGVAPEKIFLVEK 435 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 436 GDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 495 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V + Q +R + +++++ + L Sbjct: 496 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVRKIVEEGLQEKRIEWSEIKQNMRDQISKL 554 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 555 LFESTKRRPMIIPVISEI 572 >gi|94986249|ref|YP_605613.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94556530|gb|ABF46444.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 563 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 179/553 (32%), Positives = 287/553 (51%), Gaps = 18/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG N+ Y + + +++D G++FP GVDL+ P I ++ + Sbjct: 23 LEIIPLGGMGEIGKNITAYRF----QDEIMVVDGGLAFPDPHQLGVDLIIPRIDYLQQHA 78 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 + +TH HEDH G L + L VPVY +P +GL+ K V + + Sbjct: 79 DLIKGWILTHGHEDHIGGLPYILPRLPRVPVYGAPLTLGLVREKLSEFGVRESDVDLREV 138 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 K+ +G F +E +R+ HSIP+ ++ +PVG ++HTGD+KLD+ G ++D Sbjct: 139 DLNAKIRIGRHFGVEFIRMTHSIPDNAGYILTTPVGRVLHTGDFKLDEHPSDGKLSDLGR 198 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G EG+L L+ DSTNA R G +SE + KN+ D++ +G V +TTF+S++ RI + Sbjct: 199 IEQVGREGVLLLISDSTNAERPGRTMSEAEVAKNLEDVIARCRGRVFMTTFASNIHRIGN 258 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +I IA ++GR++V+ G S+ + VA +G + + LS E G Q++ + TGSQ Sbjct: 259 VIQIAHRLGRRVVMEGRSMLKYAQVAQQLGYMDLPEPLLSSEEVGDLQDPQVLYVCTGSQ 318 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P S L++L+ G + L D+VI SS IPGNE A+ + NRL E GV V Sbjct: 319 GQPMSVLSRLAFGNHAKIALKRGDSVILSSNPIPGNEEAVNLVINRLYEIGVDVYY-PPT 377 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH +L + RP+ + HGEP H + H LA RNG Sbjct: 378 YRVHASGHGSQEELATVLNLARPKYFLPWHGEPRHQINHARLAQTLPRPPRRTLIARNGD 437 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++RL PD + V G DG +G D + R +S G L + +L ++ Sbjct: 438 VVRLGPDEFRVTGTVPAGGVYVDGLGVGDVGDDVLLDRANMSQEGILIMTAVLHPTPHV- 496 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 EIV G + D + + + + V + +++ L+ +R+ + A+R ++K Sbjct: 497 ---EIVSRGFVRPNRD---LDGQIRRVALDAVETGMREKKR-LEDVRDDMYGAVRRFVRK 549 Query: 541 VWGKKPLVTVFIN 553 V G+ P++ I Sbjct: 550 VTGRNPVLIPLIV 562 >gi|57866765|ref|YP_188424.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|242242558|ref|ZP_04797003.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|251810706|ref|ZP_04825179.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|293366761|ref|ZP_06613437.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|57637423|gb|AAW54211.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|242233985|gb|EES36297.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|251805866|gb|EES58523.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|291319062|gb|EFE59432.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] Length = 568 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 18 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 73 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ + KK+ Sbjct: 74 IENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIALVKEAMKARNIKKKVRYY 133 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 134 TVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKFDQSLHGHYAPDLK 193 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 194 RMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFAKVKGRLIVSCYASNFVRIQ 253 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 254 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVENYPKNEVIIIATG 313 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q++R + + + + E D++ + A EV I N LV G +I Sbjct: 314 MQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIADTLNELVRAGAHII--P 371 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 372 NNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLAAETGVAPEKIFLVEK 431 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 432 GDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 491 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V + Q +R + +++++ + L Sbjct: 492 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVRKIVEEGLQEKRIEWSEIKQNMRDQISKL 550 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 551 LFESTKRRPMIIPVISEI 568 >gi|254776082|ref|ZP_05217598.1| hypothetical protein MaviaA2_15620 [Mycobacterium avium subsp. avium ATCC 25291] Length = 558 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 171/555 (30%), Positives = 287/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ I Sbjct: 16 LRVTALGGISEIGRNMTVFEHL----GRLLIIDCGVMFPTHDEPGVDLILPDLRHIEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +THAHEDH G + L +PV S F + L+ AK R+ K + Sbjct: 72 DDIEALVLTHAHEDHIGGIPYLLKLRPDIPVVGSKFTLALVAAKCREHRL--KPVFVEVS 129 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G K G F E VNHSIP+ +A+ + + G ++HTGD KLD + G TD + Sbjct: 130 EGHKSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTNA G SE + ++ +++ A+G V+V F+S+V R++ II Sbjct: 190 RLGDAGVDLFLCDSTNAELPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G ++ D + + L P E++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGFLRVADADVIDIGAAELMPPERVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL+++SRGE R++ L D V+ +S IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA + G+ + NG Sbjct: 369 RVHVSGHVYAGELLFLYNGVRPRHVMPVHGTWRMLRANSKLAARTGVPEESILLAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 429 VDLVAGRASISGAVPVGKMFVDGLVDGDVGDITLGERLILS-SGFVAVTVVVQRGTGRPV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G + K + ++ V + L D + + + + + + Sbjct: 488 APPHLHSRGFS----EDPKALEPAVRRVEEELEALVAENITDPSRIAQGVRRTVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + ++ Sbjct: 544 TYRRQPMIVPTVIEV 558 >gi|22298763|ref|NP_682010.1| hypothetical protein tlr1220 [Thermosynechococcus elongatus BP-1] gi|22294944|dbj|BAC08772.1| tlr1220 [Thermosynechococcus elongatus BP-1] Length = 581 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 174/547 (31%), Positives = 289/547 (52%), Gaps = 17/547 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ + + I++D G++FP D + GV +V PD+T++ + R Sbjct: 10 LKIIPLGGLHEIGKNTCVFEF----QDEIILLDAGLAFPTDGMHGVTIVLPDMTYLRQNR 65 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +TH HEDH G + +P +Y A+ LL+ K V+ + + Q Sbjct: 66 HKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLQGKLEEAGVADRTELRTVQ 125 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + V +G F +E +R HSI ++ ++ I +P+G I+HTGD+K D + G+ D L Sbjct: 126 PREMVRLGKNFLVEYIRNTHSIADSFSVAIHTPIGVIIHTGDFKFDFTPVDGECFDLQRL 185 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTN+ G SE+ + N+ A+G ++ TTF+SSV R+ Sbjct: 186 AEHGEKGVLCLISDSTNSEVPGHTPSERSVFPNLDRAFSQAEGRIIFTTFASSVHRLSMA 245 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A++ GR + +LG S+ V++ A +G I+ D LF+ YP Q++ + TGSQ Sbjct: 246 LELAQKHGRVVSVLGRSMLNVIAHARQLGYIRCPDDLFVPLHMMHKYPDHQVMYLTTGSQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP SAL ++S+GE +K+ DTVI S+ IPGN +A+ ++ +RL+ QG +VI E Sbjct: 306 GEPLSALTRISKGEHNKIKIRPGDTVILSAHPIPGNTIAVVNMIDRLMMQGAKVIYGR-E 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH D K M +P+ + +HGE LV H + A GI + + NG Sbjct: 365 QGIHVSGHACQEDQKLMLALTKPKFFLPVHGEHRMLVKHAQTAQSMGIPPENMVIIDNGD 424 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L D I +ID+V G+ L D I K + +R+QL+ G ++V V + ++ Sbjct: 425 VVELTRDSIRVIDKVPAGIELLDRGGIVKAH--VLQERQQLAEEGIITVAVAVGTDGSLK 482 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD----LPQFRRKDLKLLRESISSALRS 536 PE+ G+ + + TV T + D + D ++ I L Sbjct: 483 ATPEVHLRGVVTAI-EPQAWQAWVHATVETALSDRWSEYTRNGEVDWAGVKAHIERELVR 541 Query: 537 LLKKVWG 543 L+++ Sbjct: 542 LVRRELQ 548 >gi|315158441|gb|EFU02458.1| conserved hypothetical protein [Enterococcus faecalis TX0312] Length = 565 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 145/566 (25%), Positives = 266/566 (46%), Gaps = 14/566 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V P+ T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPEFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLRLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +I G Y + K V V + + L++ I Sbjct: 475 RREKRIVSPAKITSRGF-VYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIREN 533 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 L L + ++P++ I + ++++ Sbjct: 534 LSRYLFEQTKRRPVILPVIMEATQRK 559 >gi|259046429|ref|ZP_05736830.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] gi|259036917|gb|EEW38172.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] Length = 557 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 145/555 (26%), Positives = 265/555 (47%), Gaps = 13/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV E G ++ ++DCG+ +P+D+L G+D+V PD +++ + + Sbjct: 4 IKIIALGGVRENGKSLYAVE----VEEDIFVLDCGLVYPEDELLGIDVVIPDFSYLEENK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQ 124 + + +F+TH H D GAL + PV+ S I L + ++ K Sbjct: 60 ERIAGVFLTHGHADAVGALPYFLQNIDAPVFGSKLTIALAKYYVESSKLVKGFNDYHEVT 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D + +I+ + H+IP+++A+VI++ GNIV+TGD+K D A + T+ + Sbjct: 120 ENTEIDFASATIKFFKTTHTIPDSLAIVIKTSEGNIVYTGDFKFDQSASVEYQTNFGRIT 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G + +LAL+ DS++A +S++ I + + + NA+G ++V +S++ RI+ +I Sbjct: 180 DVGEDYVLALLSDSSDAESPVENVSDRKIAEAMLETFLNAQGRIVVACVASNILRIQQVI 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 + A + GRKI L GS L+ +V++A+ + + +L ++ P +L+++ TG+ Sbjct: 240 NAAYESGRKIFLTGSELEEIVNIALSLNKLTVPDKELIITFNQMKKLPDNELVILETGNA 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP AL +++ G R V L E D V ++ E I K+ + V Sbjct: 300 GEPIKALQKMALGRHRQVNLHEGDLVYIATTPSVAMETQIARTKDLIYRADAEVFEMANS 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 SGH PNDLK M ++P + + GE L+AH ELA + GI + G Sbjct: 360 KK--ASGHATPNDLKLMINLLQPTFFIPVQGEYRSLLAHAELANELGIPYKNIFIPGKGD 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ + + +V G L DG +G ++ + R+ LS G V + I Sbjct: 418 VVEIENGQMNASGQVAAGNVLVDGIGVGDIGNIVLKDRKILSEDGVFVAVVTISRRLGKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G Y ++ K V V + + L++ + AL L Sbjct: 478 LSGPQIISRGF-VYMKTSEELLTEAQKIVTDVVEENLASEDFEWPRLKQEVRDALSRYLF 536 Query: 540 KVWGKKPLVTVFINK 554 ++P++ I + Sbjct: 537 DKTKRRPVILPMIME 551 >gi|237751434|ref|ZP_04581914.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372800|gb|EEO23191.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 736 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 290/555 (52%), Gaps = 10/555 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ++ PLGG+GEIG NM + + + I+ID G+SFP + +PGVD++ PD +I Sbjct: 148 NAKVRITPLGGLGEIGGNMTIIE----TEKSAIVIDIGMSFPDESMPGVDILIPDFHYIQ 203 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + + A+ ITHAHEDH GA+ + P+Y +P A+GL+ K + + K Sbjct: 204 SIKNKIAAVVITHAHEDHIGAVPYFYKQFQFPLYGTPLALGLVGNKFEEHGLKQYKSLFH 263 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V +G F IE + + HSI ++ AL IR+ G I+HTGD+K+D I TD Sbjct: 264 IVEKRSPVRIGDFEIEWIHITHSIIDSSALAIRTEAGVIMHTGDFKIDHTPIDNLPTDLH 323 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G EG++ L+ DSTN+ + G SE + ++ KNA G V+++TFSS++ R+ Sbjct: 324 RLAHYGEEGVMLLLSDSTNSHKSGVTPSEASVGPTFDNLFKNATGRVIMSTFSSNIHRVY 383 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I + RK+ ++G S+++ + +A ++G I +F+ YP E+++++ TG Sbjct: 384 QAISYGLKYNRKVAVIGRSMEKNLDIARELGYIDLPSNVFIEAHEVLQYPDEEVLIVTTG 443 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++K+ D VI S++AIPGNE ++ + N +++ G +V +D Sbjct: 444 SQGETMSALYRMATDEHRHIKIKPTDMVILSAKAIPGNEGSVSAVINLIMKAGAKVAYQD 503 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + + Sbjct: 504 F-SEIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIAKHKQTAIACGVLEKNIYLMED 562 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + P+ + + V G D + + I +R L+ G + + +D Sbjct: 563 GDQIEVNPNYMRKVKSVRTGKSFVDNQANRQIENDVINERNLLANDGIFILTLRMDMQKR 622 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I GI + + K ++ + + KD K L + SALR LL Sbjct: 623 KILENRINVFGILGQKEEAE-LAKFVMDNINMHFSNAKPTIFKDAKSLENDLFSALRKLL 681 Query: 539 KKVWGKKPLVTVFIN 553 K + K P + V + Sbjct: 682 FKRFKKYPAILVNVL 696 >gi|147742900|sp|Q5HPR6|RNJ2_STAEQ RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|147742903|sp|Q8CST0|RNJ2_STAES RecName: Full=Ribonuclease J 2; Short=RNase J2 gi|319401435|gb|EFV89645.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] gi|329736351|gb|EGG72623.1| ribonuclease J 2 [Staphylococcus epidermidis VCU028] gi|329736592|gb|EGG72858.1| ribonuclease J 2 [Staphylococcus epidermidis VCU045] Length = 557 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ + KK+ Sbjct: 63 IENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIALVKEAMKARNIKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 TVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKFDQSLHGHYAPDLK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFAKVKGRLIVSCYASNFVRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q++R + + + + E D++ + A EV I N LV G +I Sbjct: 303 MQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIADTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLAAETGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V + Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVRKIVEEGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|318043037|ref|ZP_07974993.1| hypothetical protein SCB01_15091 [Synechococcus sp. CB0101] Length = 658 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 165/565 (29%), Positives = 291/565 (51%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +++ Sbjct: 6 KKPCLRVIPLGGLHEIGKNTCVFEYG----DDIMLVDAGLAFPSDGMHGVNVVMPDTSYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + ++P ++ A+ +L K V + Sbjct: 62 KENQKRIRGMIVTHGHEDHIGGIAHHLKNFNIPVIHGPRLALAMLTGKMEEAGVMDRTIL 121 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I +PVG ++ TGD+K D + G+ D Sbjct: 122 QTVAPRDVVKVGQHFSVEFIRNTHSMADSFSLAITTPVGTVIFTGDFKFDHTPVDGETFD 181 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L DSTN+ G C E+ + + + A G V++TTF+SS+ R Sbjct: 182 MARLAHYGEQGVLCLFSDSTNSEVPGFCPPERSVFPCLDRHISQADGRVIITTFASSIHR 241 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ Sbjct: 242 VAMILELALKNGRKVGLLGRSMLNVIAKARELGYMRAPDDLFVPIKQIRDLPDRETLLLM 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 302 TGSQGEPLAALSRISRGEHPQVQVKTSDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVY 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M +P+ V +HGE LV H + A G+ + + Sbjct: 362 GKGEG-IHVSGHGFQEDQKLMLALTKPKYFVPVHGEHRMLVCHSKTAQSMGVPAENILII 420 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L PD I + V G+ L D G + +R+QL+ G +++ ++ Sbjct: 421 DNGDVVELTPDSIAKGEPVKAGIELLDASRNGIVDARVLKERQQLADDGVITMLAVISTD 480 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ D K+ + + + + + D ++ Sbjct: 481 GVMAAPPRVNLRGV-VTAADPRKLSLWAEREITWVLENRWQQLSRNSGGKAPDVDWMGVQ 539 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 I L+ L++ +PL+ + Sbjct: 540 REIEIGLQRRLRRELQVEPLIICLV 564 >gi|148241169|ref|YP_001226326.1| metallo-beta-lactamase superfamily hydrolase [Synechococcus sp. RCC307] gi|147849479|emb|CAK26973.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Synechococcus sp. RCC307] Length = 619 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 164/562 (29%), Positives = 290/562 (51%), Gaps = 20/562 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGG+ EIG N ++ +G ++ID G++FP D + GV++V PD +F+ + Sbjct: 12 TLRVIPLGGLHEIGKNTCVFEFG----DDLVLIDAGLAFPSDGMHGVNVVMPDTSFLREN 67 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCISF 123 +K + + +TH HEDH G + ++P+ Y A+ LLE K V+ + + Sbjct: 68 QKRIRGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLALSLLEGKMSEAGVADRTVLQTV 127 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + V +G F IE +R HS+ ++ +L + +PVG ++ TGD+K D + G+ D Sbjct: 128 TPREVVKLGQHFKIEFIRNTHSMADSYSLAVTTPVGTVIFTGDFKFDHTPVDGEHFDMAR 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G++G+L L DSTN+ G C E+ + + + A+G V++TTF+SS+ R+ Sbjct: 188 LAHHGDQGVLCLFSDSTNSEVPGFCPPERSVFPCLDRRIAEAEGRVIITTFASSIHRVAM 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++++A + GRK+ LLG S+ V++ A ++G ++ D LF+ + P + +++ TGS Sbjct: 248 VLELAMKNGRKVSLLGRSMLNVIAKARELGYMRCPDDLFVPIKQIRDLPDRETLLLMTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +AL+++SRGE V++ DT+IFS+ IPGN +++ + +RL+ G +V+ Sbjct: 308 QGEPLAALSRISRGEHPQVQVKSTDTIIFSASPIPGNTISVVNTIDRLMMLGAKVVYGKG 367 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E +HVSGH + D K M +P+ +V +HGE LV H A G+ + NG Sbjct: 368 EG-IHVSGHGFQEDQKLMLALTKPKFMVPVHGEHRMLVQHARTAHSMGVPENNTLIIDNG 426 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L D I D V G+ L D G + +R+QL+ G +++ + + Sbjct: 427 DVVELTADSIRKGDPVKAGIELLDNSRTGIVDARVLKERQQLAEDGVITLLAAVSVDGKM 486 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESI 530 P + G+ + K+ + V + + + D ++ I Sbjct: 487 VAPPRVNLRGVVTT-AEPRKLSMWAEREVNWVLDNRWKQLCRNTGGKAPEVDWIGVQREI 545 Query: 531 SSALRSLLKKVWGKKPLVTVFI 552 L+ L++ +PL+ + Sbjct: 546 EVGLQRRLRRELQIEPLIICLV 567 >gi|269215592|ref|ZP_06159446.1| metallo-beta-lactamase family protein [Slackia exigua ATCC 700122] gi|269131079|gb|EEZ62154.1| metallo-beta-lactamase family protein [Slackia exigua ATCC 700122] Length = 633 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 290/559 (51%), Gaps = 16/559 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L +PLGG+ IG NM + G I++D G+ FP D+ PG+DL+ PD T++ Sbjct: 84 SSARLDIIPLGGLDGIGKNMTAFVCG----DDMILVDAGLMFPDDNHPGIDLILPDYTYV 139 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ L I ITH HEDH G+L L L VP+YA+ +GL+E K RV K Sbjct: 140 LEHEDKLRGIIITHGHEDHTGSLPYLMKDLSRKVPIYATKLTLGLIEGKFAEHRV--KAR 197 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 AGD++ +G+F I+ VNHSIP + + +++P GN++HTGD+KLD I G TD Sbjct: 198 LCEIHAGDEMKLGSFLIDFFAVNHSIPGAVGVFMQTPAGNVMHTGDFKLDQTPIDGVHTD 257 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L G+ L+ DSTN+M+ SE + K + IM NA G V++ +F+S + R Sbjct: 258 FAALARFSEIGVDLLLSDSTNSMKSSFTPSEAEVGKALRSIMANATGRVIIASFASHIHR 317 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 ++ I D A GRK+V+ G S+ + +A +G + D L P E+++++ Sbjct: 318 LQQIADAAVANGRKVVVTGRSMIQNTDIARRLGYLHIADDNLLDAYDLKDLPPERVVIMC 377 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SALA+++ GE R + + DTVI S+ +PGNE A+ + N L + G V Sbjct: 378 TGSQGEPLSALARIANGEHRTIDIDRGDTVIISATPVPGNEKAVTRVTNSLAKIGCDV-Y 436 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + + VHVSGH +LK + ++P+ + +HGE HL AH L G+ + Sbjct: 437 DKSRALVHVSGHAGAEELKIVLSIVKPRAFMPVHGEAAHLRAHARLGEAVGVDPRNIFIC 496 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG L L + + + V G+ DG +G + +R LS G S+ +D Sbjct: 497 ENGDTLTLTTNGVRRGEPVESGIVFVDGLSVGDTTRDVLDERTTLSESGLASIACAVDPK 556 Query: 477 Y-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + G + GI GD ++ + V ++ + ++ + L + + AL Sbjct: 557 GRKVLGDVRVEMRGI--TGGDVSRLRAEAVSCVEGSLRRGLERGKRG-RDLEKLLKDALL 613 Query: 536 SLLKKVWGKKPLVTVFINK 554 SLL + ++P+V I + Sbjct: 614 SLLWERTKQRPMVIASIIE 632 >gi|166007339|pdb|3BK1|A Chain A, Crystal Structure Analysis Of Rnase J gi|166007340|pdb|3BK2|A Chain A, Crystal Structure Analysis Of The Rnase JUMP COMPLEX Length = 562 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 278/561 (49%), Gaps = 22/561 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +PLGG GEIG N+ ++ + + ++D G++FP++ PGVDL+ P + +++ Sbjct: 14 QDHVEIIPLGGXGEIGKNITVFRF----RDEIFVLDGGLAFPEEGXPGVDLLIPRVDYLI 69 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSKK 117 + R + A +TH HEDH G L L + VP+Y + +GLL K + Sbjct: 70 EHRHKIKAWVLTHGHEDHIGGLPFLLPXIFGKESPVPIYGARLTLGLLRGKLEEFGLRPG 129 Query: 118 IPC-ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 D++ VG F+++ R HSIP+ +VIR+P+G IVHTGD+KLD I G Sbjct: 130 AFNLKEISPDDRIQVGRYFTLDLFRXTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDG 189 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 V+ + G EG+L L+ D+TNA R G SE I K + ++ A G V VTTF+S Sbjct: 190 KVSHLAKVAQAGAEGVLLLIADATNAERPGYTPSEXEIAKELDRVIGRAPGRVFVTTFAS 249 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + RI+S+I AE+ GRK+ G S + +A+++G +K + E P Q++ Sbjct: 250 HIHRIQSVIWAAEKYGRKVAXEGRSXLKFSRIALELGYLKVKDRLYTLEEVKDLPDHQVL 309 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ATGSQG+P S L +L+ + DTVI SS IPGNE A+ + NRL G Sbjct: 310 ILATGSQGQPXSVLHRLAFEGHAKXAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAY 369 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 V+ VH SGH +LK + P+ + HGE H K LA Sbjct: 370 VLY-PPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQXNFKWLAESXSRPPEKT 428 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG + RL + E + EV HG+ DG +G + +A RR + G + + L Sbjct: 429 LIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHXAEEGLVVITALA 488 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 V E+V G G ++ + + + + + + ++ L+ +R+ I Sbjct: 489 GED----PVVEVVSRGFV---KAGERLLGEVRRXALEALKNGVREKKP-LERIRDDIYYP 540 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 ++ LKK G+ P + + + Sbjct: 541 VKKFLKKATGRDPXILPVVIE 561 >gi|86605341|ref|YP_474104.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] gi|86553883|gb|ABC98841.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] Length = 616 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 174/559 (31%), Positives = 283/559 (50%), Gaps = 17/559 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG EIG N + Y I++D G++FP + + G+++V PD+T+I + R Sbjct: 23 LQMIPLGGEREIGKNTWAFRY----EDDIILLDAGLAFPDESMHGINIVLPDMTYIKQNR 78 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +TH HEDH G + +P +Y A+ LLE K + + Sbjct: 79 DKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEDKLREVGLLNRTELRPVG 138 Query: 125 AGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V + F E +R HS P++ + + +PVG ++ TGD+K+D + G+ D L Sbjct: 139 PRDIVPLSKNFFAEFIRNTHSFPDSFTVALHTPVGVVIQTGDFKIDHTPVDGERFDLQRL 198 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTNA G SE + + + AKG V++TTF+SSV R+ + Sbjct: 199 AEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGRVIITTFASSVHRLNLV 258 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATGSQ 302 + IAEQ GR + LLG S+ VV+ A +G I+ L P +++I++ TGSQ Sbjct: 259 LQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDKVIILTTGSQ 318 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL +++ GE +++ DTVI+S+ IPGN +A+ + ++L+E G VI + Sbjct: 319 GEPLAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTRVIDKLMELGADVIYGK-D 377 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH D K M RP+ V HGE LV H E A+ GI + + NG Sbjct: 378 KGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETAMSMGIPRENIVIIGNGD 437 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ + + I I+D+V GL + G D + +R+Q++ G L+V + LD + Sbjct: 438 VVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAKDGMLTVVISLDGRGQLL 497 Query: 481 GVPEIVDIGIPAYDGD--GGKIHKLLLKTVITTVVDLPQFRRK-----DLKLLRESISSA 533 P++ +G+ G + LL T+ + + D L+ + Sbjct: 498 CTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLERGRLDIDWAGLKAEVERV 557 Query: 534 LRSLLKKVWGKKPLVTVFI 552 +R +++ KP V VF+ Sbjct: 558 VRRFVREQLPGKPTVLVFV 576 >gi|153002975|ref|YP_001377300.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152026548|gb|ABS24316.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 550 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 177/558 (31%), Positives = 288/558 (51%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIGMN + + ++DCG+ FP ++ GVD++ PD+ ++ + R Sbjct: 5 VRIVPLGGLGEIGMNCMAIE----ADGRMAVVDCGILFP-NEPIGVDVIAPDLGWLRERR 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + AI++TH HEDH GAL L + PVY + F + LL + V + + Sbjct: 60 EQVGAIYLTHGHEDHIGALPFLLREVKAPVYGTRFTLALLRPRLEEAGVEADLREV--AP 117 Query: 126 GDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 GD G S E V HSIP+ L + +P G I+H+GD+K+D I G D Sbjct: 118 GDARPAGEASPLSAEFYAVTHSIPDACGLALSTPQGTILHSGDFKIDPRPISGPGFDLAR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + A+G G+ L+ DSTN+ R G+ +SE + + + + A V V F+S++ RI+ Sbjct: 178 VEALGRRGVRLLLSDSTNSERPGSSLSEAEVGAALEEAFERAPARVFVACFASNIHRIQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGS 301 + + A GR++ LLG S++ V +A +G ++ + P ++L V+ TG+ Sbjct: 238 VANAARAFGRRLALLGRSMETNVRLAQALGYLELPGWMPVGFPEARELPPKELCVLTTGT 297 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEPRSALA+L+RGE ++ +A D V+ SSR IPGNEVA+G + N L +G +V E Sbjct: 298 QGEPRSALARLARGEHLDLDVAPGDLVVLSSRFIPGNEVAVGELVNALCRRGAQVAYEGL 357 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+HVSGH + +R+ RP+ V IHGE HL H A EG+ + +G++ Sbjct: 358 R-PLHVSGHAQEAEQRRLIALARPEHFVPIHGEYRHLARHAAHAAAEGVRGRHLLLDGQV 416 Query: 422 LRLFPDPIEI-IDEVVHGLFLKDGFLIG--KFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 L L + + V G D + L + RR L+ G + +D Sbjct: 417 LELGDLGATVLEEPVPVGRVYTDRDALLGQDIGALVVKDRRLLAEAGLCIAVLAVDKVTG 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + PE+ G+ ++G +I L+ + +L R ++ ++E++ A+R Sbjct: 477 AVIRGPELFARGVAGFEGAEEEIRAEALR----ALDELTPQARVAIEEVQETLRVAVRRF 532 Query: 538 LKKVWGKKPLVTVFINKI 555 LK+ GK+P V + ++ Sbjct: 533 LKRTTGKRPTVLPVVLEL 550 >gi|114771835|ref|ZP_01449228.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium HTCC2255] gi|114547651|gb|EAU50542.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium HTCC2255] Length = 555 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 194/555 (34%), Positives = 306/555 (55%), Gaps = 5/555 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITF 60 +L++LPLGG GEIGMNM LYGYG ++I+ D GV+FP D PGVDL+ D F Sbjct: 3 SKNKLIYLPLGGAGEIGMNMYLYGYGPKGKERFILADVGVTFPAMDGTPGVDLIMADTKF 62 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + L IFITHAHEDH GA+ LW L+ P+Y F + +AK S + Sbjct: 63 IQERADRLDGIFITHAHEDHIGAIGLLWPHLNAPIYCRKFTAAVAKAKMEDRNQSSDMIE 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + VG F + + V HSIPE LVI +P I+HTGD KLD + ++G+ + Sbjct: 123 ILPPYPEMKKVGRFKVGILPVPHSIPEASGLVIETPDQRIIHTGDLKLDPNPVVGEPFNP 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G +G+ L+CDSTN SE + K I D++K+A G V+ TTF+S+V+R+ Sbjct: 183 KLFEDLGKKGVDVLVCDSTNIFSNRPGRSESTLVKPIADMIKSANGMVVATTFASNVARL 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +++ GR + +LG S+++++ A G++ + E PRE L+++ TG Sbjct: 243 KTLAQAGIDAGRSVCVLGRSMQKMLGYAHSTGVLDDFPPTVQLEDVPNIPRENLMLLVTG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE R+A AQL+RG+ + + + DT +FSS+ IPGNEV++G I N QGV VI + Sbjct: 303 SQGEGRAASAQLARGKYLGITMQDGDTFLFSSKTIPGNEVSVGRIINSFAMQGVNVIDDS 362 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 AE HVSGH DL+ +++ ++P+ L+ +HGE HL H ELA +GI + V NG Sbjct: 363 AE-IYHVSGHANRPDLEEIHRLLKPKTLIPMHGEYRHLKEHSELAASKGIESL-IVPNGS 420 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ + +I+D + G DG + D + R +++ G +++++++ Sbjct: 421 VVEIGDKGAKIVDHIETGRIYLDGSRLIGAYDGVVLDRIRMATRGTVAISLVI--EGTEV 478 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 IG+P + + +++ + V T++ KD + + +S + S+ K Sbjct: 479 LGVWAEPIGLPETEIYEDGLVEIIEEQVENTLLKSKAKLLKDDHEVEKLVSKVVTSVCKN 538 Query: 541 VWGKKPLVTVFINKI 555 GKKP+ + IN++ Sbjct: 539 EIGKKPITRILINRL 553 >gi|282876293|ref|ZP_06285160.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|281295318|gb|EFA87845.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] Length = 557 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 281/558 (50%), Gaps = 11/558 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ + KK+ Sbjct: 63 IENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIALVKEAMKARNIKKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 TVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKFDQSLHGHYAPDLK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG+EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFVKVKGRLIVSCYASNFVRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q++R + + + + E D++ + A EV I N LV G +I Sbjct: 303 MQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIADTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLAAETGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I PEI G Y + ++ K + V V + Q +R + +++++ + L Sbjct: 481 RIAAGPEIQSRGF-VYVRESEELLKEAEEKVRKIVEEGLQEKRIEWSEIKQNMRDQISKL 539 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P++ I++I Sbjct: 540 LFESTKRRPMIIPVISEI 557 >gi|160913557|ref|ZP_02076248.1| hypothetical protein EUBDOL_00033 [Eubacterium dolichum DSM 3991] gi|158434109|gb|EDP12398.1| hypothetical protein EUBDOL_00033 [Eubacterium dolichum DSM 3991] Length = 616 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 168/558 (30%), Positives = 273/558 (48%), Gaps = 14/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ L LGG+GE+G NM + +G + +++D GV FP++DL GVD V PD + Sbjct: 41 RNDTL-IYALGGLGEVGKNMYCFEHG----NEILIVDSGVRFPEEDLLGVDYVIPDYNHL 95 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + + ITH HEDH G + L + + +YA FA+ L+ K ++ + + Sbjct: 96 VKNNRKRKVLVITHGHEDHIGGIPFLLKTVDIEAIYAPAFAVALITKKLEERKMLRGVKL 155 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + + F+ HSIP+++ ++I +P G +VHTGD+K D I D Sbjct: 156 IEISDRSSLKMHHFTCGFFNTTHSIPDSLGILINTPNGRVVHTGDFKFDLTPIGS-NADY 214 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G G+ L+ DSTN+ E ISEK + I D MK +G ++V TF+S+V R+ Sbjct: 215 QVMAYMGQIGVDLLLSDSTNSGVEDFSISEKKVAAEILDTMKKTEGRLIVATFASNVYRV 274 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II+ A GRK+++ G S++ VV++ G IK +Q FLS E P + ++ T Sbjct: 275 AQIIEAAIACGRKVIIFGRSMENVVTIGRKTGKIKVGEQHFLSPEQLAYTPANKTCIVCT 334 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +KL DTVIFSS IPGN ++ + N+L G V+ + Sbjct: 335 GSQGEPLAALSRIANGTHRYIKLIPGDTVIFSSSPIPGNGASVNQVINKLFRAGANVLTK 394 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP---V 416 +H +GH + K M Q I+P+ + +HGE L HK+ A++ GI Sbjct: 395 SILGNLHTTGHASQEEQKLMLQLIKPKYFMPVHGEYKMLKQHKDTAIETGIPSENIFTCA 454 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 ++ E ++ DG I + + R+ L+ G ++V + +D Sbjct: 455 NGDVLILRNHQVFESSWRIMADDIYVDGNDISGVSTAVLKDRKILADNGLVAVIIAIDSR 514 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P IV G + D + K V + + +R L+ + L Sbjct: 515 ENKVLTKPVIVSRGF-VFIKDSQGLLKEAEMIVYNALNE-KMQQRTTFSELKNCVRGTLE 572 Query: 536 SLLKKVWGKKPLVTVFIN 553 L + P+V I Sbjct: 573 PFLYNKTHRNPIVIPVII 590 >gi|159904319|ref|YP_001551663.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9211] gi|159889495|gb|ABX09709.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9211] Length = 662 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 168/565 (29%), Positives = 296/565 (52%), Gaps = 20/565 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG +++D G++FP D + GV++V PD +++ Sbjct: 22 KQPSLKVIPLGGLHEIGKNTCVFEYG----DDLMLVDAGLAFPSDGMHGVNVVMPDTSYL 77 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + + + + +TH HEDH G + ++P +Y A+ +L+ K V+ + Sbjct: 78 RENQHRMRGMIVTHGHEDHIGGISHHLKHFNIPVIYGPRLAMSMLQGKMEEAGVTDRTTI 137 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D V VG FS+E +R HS+ ++ +L I++PVG I+ TGD+K D + G+ D Sbjct: 138 HTVGPRDVVKVGQYFSVEFIRNTHSMADSFSLAIKTPVGTIIFTGDFKFDHTPVDGEHFD 197 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G+EG+L L DSTNA G C SE+ + + + A+G V++TTF+SS+ R Sbjct: 198 LARLAHHGDEGVLCLFSDSTNAEVPGWCPSERTVFPALERHLAEAQGRVIITTFASSIHR 257 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + GRK+ LLG S+ V++ A ++G +K D LF+ + P + +++ Sbjct: 258 VAMILELALKHGRKVGLLGRSMLNVIAKAREIGYMKAPDDLFVPIKQIRDMPDRETLLLM 317 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRG+ ++V++ DT+IFS+ IPGN +++ + +RL++ G +VI Sbjct: 318 TGSQGEPLAALSRISRGDHQHVQVKTTDTIIFSASPIPGNTISVVNTIDRLMKLGAKVIY 377 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH + D K M +P+ V +HGE LV H + A G+ + + Sbjct: 378 GKGEG-IHVSGHGFQEDQKLMLALTKPKYFVPVHGEHRMLVCHSKSAQTMGVPENNILIL 436 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ L P+ I V G+ L D G + +R+QL+ G +++ V + Sbjct: 437 ENGDVVELTPNSINRGQPVKAGIELLDASRNGIVDARVLKERQQLAEDGVITLLVAVSTD 496 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLR 527 + P + G+ + K+ K + + + D + Sbjct: 497 GAMVAPPRVNLRGV-ITSAEPKKMSFWTEKEITWVLDNRWKQLSRQVSANSVEVDWIGFQ 555 Query: 528 ESISSALRSLLKKVWGKKPLVTVFI 552 + + L +++ +PL+ + Sbjct: 556 REVEAGLARRMRRELQVEPLILCLV 580 >gi|325283533|ref|YP_004256074.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324315342|gb|ADY26457.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 555 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 169/553 (30%), Positives = 293/553 (52%), Gaps = 18/553 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG N+ Y Y + +++D G++FP PG+DL+ P + ++++ Sbjct: 15 LQVIPLGGMGEIGKNITAYRY----EDEILLVDGGLAFPDATQPGIDLIIPRMDYLLQNA 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 + ++TH HEDH G L L + L +P+Y +GL+ K + + Sbjct: 71 GLIRGWYLTHGHEDHIGGLPYLVARLPKIPIYGGALTLGLVREKFREFGIKDSDVDFREV 130 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +AGD++++G F ++ R+ HSIP+ V+++PVG +VHTGD+KLD++ G ++D Sbjct: 131 EAGDRLNIGRHFQLDVFRMTHSIPDNTGYVLKTPVGQVVHTGDFKLDEEPGDGKLSDLAR 190 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+L L+ DSTNA R G SE I +N+ +++ +G V +TTF+S V R+++ Sbjct: 191 LKQAGDEGVLLLLSDSTNAERPGRTPSEAEIARNLEEVIAGCRGRVFLTTFASQVLRLQN 250 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I++IA ++GR++V+ G S+ + VA ++G ++ + FL+ + Q++ + TGSQ Sbjct: 251 ILNIAHKLGRRVVIEGRSMLKYTQVAQELGFMEAPEPFLTSDQVAGLQDSQVLFLCTGSQ 310 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P S L++L+ G + L D+VI SS IPGNE A+ + N L E G V Sbjct: 311 GQPMSVLSRLAFGNHAKIALKRGDSVILSSNPIPGNEEAVNLVINHLYEIGTDVYY-PPT 369 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH ++L + +RP+ + HGEP H + H LA RNG Sbjct: 370 YKVHASGHGSRDELAEVLNLVRPKYFLPWHGEPRHQINHARLAQTLPQPPQRTLIARNGD 429 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L + ++ V G DG +G D + R +S G + + +L ++ Sbjct: 430 IVHLEENEFKVTGTVPAGAVYVDGLGVGDIGDDILMDRSAMSQDGIIVLTAVLHPTPHV- 488 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 EIV G ++ + + + V + + +R+ L+ +R+ + +R ++K Sbjct: 489 ---EIVSRGFA---RANAELDGEIRRVALEAVTEGLRGKRR-LEDVRDDMYGQVRRFVRK 541 Query: 541 VWGKKPLVTVFIN 553 G+ P++ I Sbjct: 542 ATGRNPVLIPLIV 554 >gi|229552132|ref|ZP_04440857.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus LMS2-1] gi|258539545|ref|YP_003174044.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] gi|229314565|gb|EEN80538.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus LMS2-1] gi|257151221|emb|CAR90193.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] Length = 560 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 145/560 (25%), Positives = 254/560 (45%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM + + D G+ +P ++L G+D+V PD +++ + Sbjct: 3 KINLVALGGVRENGKNMYAVE----VDDQIFVCDFGLKYPDNELLGIDVVIPDFSYLTEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + IF++H H D GAL VPV+ S I + + ++ +KK Sbjct: 59 ADRIAGIFLSHGHADAVGALPYFLVDHPVPVFGSELTIAMAKVFMQHDSKAKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D G S+ + HSIP ++ + I + G IV+TGD+K D A TD L Sbjct: 119 DEKSVIDFGDVSVSFFKTTHSIPGSLGIDIETSEGQIVYTGDFKFDPSATPMYQTDWARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +LAL+ DS NA +E I +I + + G ++V +S++ RI+ + Sbjct: 179 AQIGNKKVLALLSDSANAESPYPNANEHEIYDHIKETFEYQDGRIIVAGVASNIQRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A +GR++VL G +++VV AI +G + D + + E+ +++ TG Sbjct: 239 INAAASLGRRVVLTGRDVEKVVKTAIRMGYIKLPDDDILAKTKELKGLAPEKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ R + + E D V ++ E K+ + G V Sbjct: 299 MGEPMKSLQRMATSRHRLIHIHEGDLVFITTTIAHAMETMAARTKDMIYRAGGDVKVLGD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +H SGH Y NDL+ M ++P+ LV + GE L AH E+A + GI + V G Sbjct: 359 D--IHSSGHAYKNDLQLMIDLLKPEYLVPVQGEYRLLAAHAEIAHEAGIPLANIFIVGMG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 +LR + V G + DG +G ++ + R+ L+ G V +D Sbjct: 417 DILRYEKGQMNASGHVNAGNTMIDGIGVGDIGNIVLRDRKMLAEDGIFIAVVTIDRKKKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G Y + V TV + D L++ + L L Sbjct: 477 VVSKPKVTSRGF-VYLKTSRDLLAESGTLVTETVQKNLDNKEFDWTHLKQDVRDKLSRFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + ++P++ I ++++ Sbjct: 536 FEQTKRRPVILPVIMEVNQN 555 >gi|300361494|ref|ZP_07057671.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] gi|300354113|gb|EFJ69984.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] Length = 591 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 137/562 (24%), Positives = 247/562 (43%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLDFFR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYGDKIAGIFLTHGHADSIGALPYILRDYDIPVFGSKLTIELAKIAVQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKDGFRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K I++I +N G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIFNIFENYDGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P ++L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDKELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQLLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDAYALEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + V + + ++ D L++ + + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGASDVIKEAVNNNFEHKKFDWTELKQDVRNDVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|312869025|ref|ZP_07729202.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] gi|311095451|gb|EFQ53718.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] Length = 597 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 154/559 (27%), Positives = 269/559 (48%), Gaps = 12/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ Sbjct: 3 KIKIIPFGGVRENGKNMYAVE----VDDQIFILDTGLKYPENELMGIDVVIPDWEYLRDR 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 59 KDKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKKHKEVKKFNDFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 AG +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD L Sbjct: 119 DAGTAIDFNDVTVSFFQTTHTIPETLGIVLETAEGNIVYTGDFKFDQTATKGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG++G+LAL+ DS A G EK I + I + K G ++V + +S++ R++ I Sbjct: 179 AEIGSQGVLALLSDSAGAGITGASSREKDIGEYIKETFKYQDGRIIVASVASNIMRVQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + RKIVL GS ++++++ A+++G + + +S + +Q++++ TG Sbjct: 239 IDAAVAVDRKIVLSGSDIEQIINTAMELGKLKMPQDILISLKEADKLDPKQVVILETGKM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +KL+++D V ++ E + K+ + G V + Sbjct: 299 GEPIKSLQQIANGDNPKIKLSDQDLVFVTTTPSYAQETEVQKTKDIIYRTGAEVKFISDD 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 ++ SGH ND + M +++PQ + I GE L H ELA + GIA + G Sbjct: 359 --LNPSGHANQNDQQLMLNFMKPQYFIPIQGEYRLLDRHAELAEEVGIAPDRIFLTNKGD 416 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + + + + G + DG IG ++ + RR LS G V +D I Sbjct: 417 VLTYDQGELHVGEHLDVGNTMIDGTGIGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ K V V D + D L++ + L L Sbjct: 477 VARPQITSRGF-VFVKTNHQLMKQSADLVEKVVQDNLDQKEFDWGHLKQDVREKLNRFLF 535 Query: 540 KVWGKKPLVTVFINKISRQ 558 + P++ I +I++ Sbjct: 536 DQTKRHPVILPVIMEINQH 554 >gi|283768842|ref|ZP_06341753.1| conserved hypothetical protein [Bulleidia extructa W1219] gi|283104628|gb|EFC06001.1| conserved hypothetical protein [Bulleidia extructa W1219] Length = 613 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 171/552 (30%), Positives = 276/552 (50%), Gaps = 13/552 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +GG+G IGMNM + + + ++IDCGV FP+++L GVD V PD ++++K + Sbjct: 36 VYAMGGLGAIGMNMYCVEH----NDEIVIIDCGVLFPQNELLGVDYVIPDFSYLVKNQTK 91 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + A+ ITH HEDH G + + + +YA FA L+E K R+++ I + Sbjct: 92 IKAMVITHGHEDHIGGIPFFLKTIRLKEIYAPRFAKRLIEKKLEEHRLTRVCKIIEIDSD 151 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 ++ F+I HSIP+++ ++I +P G IV TGD+K D + +D + + Sbjct: 152 SSINTKYFNIGFFDTVHSIPDSLGVLINTPNGRIVETGDFKFDYSPVG-KPSDFQKMAYV 210 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G G+ L+ DSTN+ G+ ISE+ + K I MK G +LV+TF+S+V R+ I++ Sbjct: 211 GQIGVDLLLSDSTNSSVPGSSISERMVAKAILSQMKKTPGRLLVSTFASNVLRVNQILEA 270 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A RKI + G S++ VV + ++G+I F+S P ++ ++ TGSQGEP Sbjct: 271 AVACNRKIAVFGRSMENVVEIGRELGVINIPKSSFISGNELNTLPANRICIVCTGSQGEP 330 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ G R +K+ DTV+FSS IPGN ++G + N+L + G V+ Sbjct: 331 MAALSRIANGSHRFIKILPGDTVLFSSSPIPGNGQSVGEVINQLTKVGANVVTNSPLTSF 390 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H +GH + K M I+P+ + HGE LV H A+ G+ NG ++ Sbjct: 391 HTTGHAPVEEQKLMLNLIKPKWFMPNHGEYKMLVEHCRTAVLTGVPEDHCFVCTNGDVVV 450 Query: 424 LFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L I + +V DG I + I R+ LS G +SV V +D+ Y I Sbjct: 451 LRNHEAFIANEKVHTDAIYVDGNDISGLSTSVIKDRQILSENGLVSVIVTIDSRYNKILC 510 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P IV G Y D + K V + Q R ++ I ++L L + Sbjct: 511 RPSIVSRGF-VYIKDSHTLLKEAELIVYEALKKTMQ-NRTTFGEIKSCIKTSLEPFLFQK 568 Query: 542 WGKKPLVTVFIN 553 + P++ I Sbjct: 569 TKRAPIIIPVIL 580 >gi|199598195|ref|ZP_03211617.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] gi|199590956|gb|EDY99040.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] Length = 560 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM + + D G+ +P ++L G+D+V PD +++ + Sbjct: 3 KINLVALGGVRENGKNMYAVE----VDDQIFVCDFGLKYPDNELLGIDVVIPDFSYLTEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + IF++H H D GAL VPV+ S I + + ++ +KK Sbjct: 59 ADRIAGIFLSHGHADAVGALPYFLVDHPVPVFGSELTIAMAKVFMQHDSKAKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D G S+ + HSIP ++ + I + G IV+TGD+K D A TD L Sbjct: 119 DEKSVIDFGDVSVSFFKTTHSIPGSLGIDIETSEGQIVYTGDFKFDPSATPMYQTDWARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +LAL+ DS NA +E I +I + + G ++V +S++ RI+ + Sbjct: 179 AQIGNKKVLALLSDSANAESPNPNANEHEIYDHIKETFEYQDGRIIVAGVASNIQRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A +GR++VL G +++VV AI +G + D + + E+ +++ TG Sbjct: 239 INAAASLGRRVVLTGRDVEKVVKTAIRMGYIKLPDDDILAKTKELKGLAPEKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ R + + E D V ++ E K+ + G V Sbjct: 299 MGEPMKSLQRMATSRHRLIHIHEGDLVFITTTIAHAMETMAARTKDMIYRAGGDVKVLGD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +H SGH Y NDL+ M ++P+ LV + GE L AH E+A + GI + V G Sbjct: 359 D--IHSSGHAYKNDLQLMIDLLKPEYLVPVQGEYRLLAAHAEIAHEAGIPLANIFIVGMG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 +LR + V G + DG +G ++ + R+ L+ G V +D Sbjct: 417 DILRYEKGQMNASGHVNAGNTMIDGIGVGDIGNIVLRDRKMLAEDGIFIAVVTIDRKKKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G Y + V TV + D L++ + L L Sbjct: 477 VVSKPKVTSRGF-VYLKTSRDLLAESGTLVTETVQKNLDNKEFDWTHLKQDVRDKLSRFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + ++P++ I +I++ Sbjct: 536 FEQTKRRPVILPVIMEINQN 555 >gi|258508335|ref|YP_003171086.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|257148262|emb|CAR87235.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|259649651|dbj|BAI41813.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 560 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM + + D G+ +P ++L G+D+V PD +++ + Sbjct: 3 KINLVALGGVRENGKNMYAVE----VDDQIFVCDFGLKYPDNELLGIDVVIPDFSYLTEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + IF++H H D GAL VPV+ S I + + ++ +KK Sbjct: 59 ADRIAGIFLSHGHADAVGALPYFLVDHPVPVFGSELTIAMAKVFMQHDSKAKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D G S+ + HSIP ++ + I + G IV+TGD+K D A TD L Sbjct: 119 DEKSVIDFGDVSVSFFKTTHSIPGSLGIDIETSEGQIVYTGDFKFDPSATPMYQTDWARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +LAL+ DS NA +E I +I + + G ++V +S++ RI+ + Sbjct: 179 AQIGNKKVLALLSDSANAESPYPNANEHEIYDHIKETFEYQDGRIIVAGVASNIQRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A +GR++VL G +++VV AI +G + D + + E+ +++ TG Sbjct: 239 INAAASLGRRVVLTGRDVEKVVKTAIRMGYIKLPDDDILAKTKELKGLAPEKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ R + + E D V ++ E K+ + G V Sbjct: 299 MGEPMKSLQRMATSRHRLIHIHEGDLVFITTTIAHAMETMAARTKDMIYRAGGDVKVLGD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +H SGH Y NDL+ M ++P+ LV + GE L AH E+A + GI + V G Sbjct: 359 D--IHSSGHAYKNDLQLMIDLLKPEYLVPVQGEYRLLAAHAEIAHEAGIPLANIFIVGMG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 +LR + V G + DG +G ++ + R+ L+ G V +D Sbjct: 417 DILRYEKGQMNASGHVNAGNTMIDGIGVGDIGNIVLRDRKMLAEDGIFIAVVTIDRKKKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G Y + V TV + D L++ + L L Sbjct: 477 VVSKPKVTSRGF-VYLKTSRDLLAESGTLVTETVQKNLDNKEFDWTHLKQDVRDKLSRFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + ++P++ I +I++ Sbjct: 536 FEQTKRRPVILPVIMEINQN 555 >gi|116494819|ref|YP_806553.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|191638329|ref|YP_001987495.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei BL23] gi|227535184|ref|ZP_03965233.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631586|ref|ZP_04674617.1| metallo-beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116104969|gb|ABJ70111.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei ATCC 334] gi|190712631|emb|CAQ66637.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei BL23] gi|227187229|gb|EEI67296.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526051|gb|EEQ65052.1| metallo-beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382356|gb|AEA53832.1| Metallo-beta-lactamase superfamily protein [Lactobacillus casei LC2W] gi|327385556|gb|AEA57030.1| Metallo-beta-lactamase superfamily protein [Lactobacillus casei BD-II] Length = 560 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 253/560 (45%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM + + D G+ +P ++L G+D+V PD +++ + Sbjct: 3 KINLVALGGVRENGKNMYAVE----VDDQIFVCDFGLKYPDNELLGIDVVIPDFSYLTEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + IF++H H D GAL VPV+ S I + + ++ +KK Sbjct: 59 ADRIAGIFLSHGHADAVGALPYFLVEHPVPVFGSELTIAMAKVFMQHDAQAKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D G S+ R HSIP ++ + I + G IV+TGD+K D A TD L Sbjct: 119 DEKSVIDFGDVSVSFFRTTHSIPGSLGIDIETSEGQIVYTGDFKFDPSATPMYQTDWARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +LAL+ DS NA +E I +I + + G ++V +S++ RI+ + Sbjct: 179 AQIGNKKVLALLSDSANAESPYPNANEHEIYDHIKETFEYQDGRIIVAGVASNIQRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--SDESFGLYPREQLIVIATGS 301 I+ A +GR++VL G +++VV AI + IK + + E+ +++ TG Sbjct: 239 INAAASLGRRVVLTGRDVEKVVKTAIRMDYIKLPNEDVLAKTKELKALAPEKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ R + + E D V ++ E K+ + G V Sbjct: 299 MGEPMKSLQRMATSRHRLIHIHEGDLVFITTTIAHAMETMAARTKDMIYRAGGDVKVLGD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +H SGH Y NDL+ M ++PQ LV + GE + AH E+A + GI + V G Sbjct: 359 D--IHSSGHAYKNDLQLMIDLLKPQYLVPVQGEYRLMAAHAEIAHEAGIPTANIFIVGMG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 +LR + V G + DG +G ++ + R+ L+ G V +D Sbjct: 417 DILRYEKGKMTASGHVNAGNTMIDGIGVGDIGNIVLRDRKMLAEDGIFIAVVTIDRKKKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G Y + V TV + D L++ + L L Sbjct: 477 VVSKPKVTSRGF-VYLKTSRDLLAESGTLVTDTVQKNLDNKEFDWTHLKQDVRDKLSRFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + ++P++ I ++++ Sbjct: 536 FEQTKRRPVILPVIMEVNQN 555 >gi|307722061|ref|YP_003893201.1| beta-lactamase domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306980154|gb|ADN10189.1| beta-lactamase domain protein [Sulfurimonas autotrophica DSM 16294] Length = 648 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 156/557 (28%), Positives = 283/557 (50%), Gaps = 14/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG N+A++ + + I++D G+SFP +D+ GVD++ PD T++ Sbjct: 97 SKAKVRVTPLGGLGEIGGNIAVFE----TDNEAILVDVGMSFPDEDMHGVDILIPDFTYL 152 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ++ I ITHAHEDH GA+ L+ L P+Y + + ++ K + + Sbjct: 153 HEIKDKIVGIVITHAHEDHIGAVPYLFRELQFPLYGTSLPLAMIGNKFDEHHLKESRKYF 212 Query: 122 SFQAGDKVDV--GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + KV F +E + + HSI ++ ++ I + G I+HTGD+K+D I G D Sbjct: 213 NPVEKRKVYKIGNDFEVEWMHMTHSILDSSSVAITTDAGTIIHTGDFKIDYTPIDGYPAD 272 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L LM DSTN+ SE + + + A+G V+++TFSS++ R Sbjct: 273 LHRLAHYGEKGVLCLMSDSTNSHNPNPTPSELSVAPALDRVFSKAEGRVVLSTFSSNIHR 332 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I + GRK+ ++G S++R + VA+ IK +F+ + + ++++ Sbjct: 333 VYQAIQYGVKHGRKVCVIGRSMERNLEVAMQYDYIKLPKSIFVEPDEVAHMNDKDVLIVT 392 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE SAL ++S GE R++K+ D ++ SSRAIPGNE +I + N L + G ++ Sbjct: 393 TGSQGEGNSALFRMSIGEHRHIKIKPNDLIVLSSRAIPGNEGSISQMLNHLQKCGAKIAY 452 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M + + P+ + IHGE H++ HKE A+ G+ + + Sbjct: 453 ---DKDIHVSGHASIEEQKLMLRLVNPKFFLPIHGEYNHVMKHKETAMMCGVPERNILLM 509 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G+ + + P + + V G D + D + R++L+ G + + + Sbjct: 510 TDGEQIEIAPKYMRKVKTVKTGKTYIDNQNNYEIEDDIVMDRQKLANDGVVMIVGQVSEQ 569 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P++ G+ A D K + + + ++++ + L + +R Sbjct: 570 TGKMMDKPKVTSFGLVADKKDKA-FAKEIEEILENFLLNMKPGLIGSHRTLEGDLRQVIR 628 Query: 536 SLLKKVWGKKPLVTVFI 552 + + K PL+ I Sbjct: 629 KHIYRKMKKYPLIVPSI 645 >gi|157803796|ref|YP_001492345.1| threonine dehydratase [Rickettsia canadensis str. McKiel] gi|157785059|gb|ABV73560.1| threonine dehydratase [Rickettsia canadensis str. McKiel] Length = 561 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 209/559 (37%), Positives = 321/559 (57%), Gaps = 10/559 (1%) Query: 1 MKN--EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MKN +L+F+PLGG EIGMN+ Y Y KW+MIDCG F D LPGVD++ D Sbjct: 6 MKNHKNDLLFVPLGGSNEIGMNLNFYHY----KGKWLMIDCGSGFADDYLPGVDMIIADS 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +FI K +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + + I Sbjct: 62 SFIEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFATNI 121 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG Sbjct: 122 KIHEVKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTKAGNILHTGDWKFDNDPILGKKA 181 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D+ L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++ Sbjct: 182 DEKLLKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIACCPQMVVVSTFASNLA 241 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R+ +II A GRK+VL G SL R++ A + G K +S+ + RE+L+VIA Sbjct: 242 RLDTIIHAAGLAGRKVVLTGRSLYRMMRAAQESGYFKDITPLISEREISRFRREELLVIA 301 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QGE +A A+L+ ++KLA KDT+IFSS+ IPGNE I + N V+ GV VI Sbjct: 302 TGCQGETMAATAKLASNSHPSIKLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVIT 361 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 E + VHVSGHP ++LK+MY IRP + + +HGEP+H+ H +LA + I V V N Sbjct: 362 ER-DHFVHVSGHPSIDELKKMYSLIRPNICIPVHGEPMHIHEHVKLAKKNSIKQVVEVEN 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++ L + ++I +V G DG + RR++S G + +V+++ Sbjct: 421 GSVVLLEHNNAKVISKVESGYLAVDGNYLIPVESPIFKARRRMSESGIVIASVVINKKGL 480 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRS 536 + P + G+ D + L+ + T+ + + + + E+I +R Sbjct: 481 LAANPMVSMPGLLDPKEDVA-LVNLIKNDIKELVTIQNKQAKKLLSDEQVIEAIKGTIRK 539 Query: 537 LLKKVWGKKPLVTVFINKI 555 LK+ K P++ V I K+ Sbjct: 540 TLKQEINKSPVIIVNIEKV 558 >gi|326387445|ref|ZP_08209054.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208101|gb|EGD58909.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 550 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 213/554 (38%), Positives = 323/554 (58%), Gaps = 9/554 (1%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK +EL+F LGG GEIGMN+ LYG KW+M+D G++F PGV+LVF D+ Sbjct: 1 MKPGKELLFCALGGSGEIGMNVNLYG----CEGKWLMVDLGMTFADPWYPGVELVFADLE 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 FI + +L+ I +THAHEDH GA+ L VP+YA+PF L+ K V + + + Sbjct: 57 FIEERSDDLLGIVLTHAHEDHIGAVPYFAQELGVPIYATPFTARLVHEKLVEAGIDRDVE 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++ +GAF I V + HSI E ALVI +P G + HTGDWKLDD+ +G Sbjct: 117 LHVIENNGRISLGAFDIRYVPLAHSIAEGNALVIDTPYGRVFHTGDWKLDDEPRVGTPAT 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVS 238 ++ L AIG+EGILAL+CDSTN SE ++ + + + + KG V+VTTF+S+V+ Sbjct: 177 EEELTAIGDEGILALVCDSTNVFNPKASGSEGAVRAGLLETIDSLKGRRVVVTTFASNVA 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R++++ ++AE GR++ + G SL R++SVA G ++ + + PR +++++A Sbjct: 237 RLQTLAEVAEATGRRLCVAGRSLDRIISVAQASGYLQDFPETVGMDDAMDLPRGEVLILA 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QGE R+ALA+++ + VKL D V+FSSR IPGNE+AIG ++N LV +GVR++ Sbjct: 297 TGGQGEARAALARIAGDQHP-VKLEAGDAVVFSSRQIPGNELAIGRVQNALVAKGVRIVT 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + + +HVSGHP +L ++Y+W+RPQ+LV +HGE H+ L EGIA +N Sbjct: 356 DR-QSMIHVSGHPGRPELMKLYEWLRPQMLVPVHGEIRHMDEQARLGRSEGIARTILQKN 414 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G ++RL P+ I EV G + DG +I I RR+L+ +G ++V + ++ Sbjct: 415 GDLVRLAPNGPHKITEVRAGRLVLDGDIITPADGEAIVARRKLAQLGLVTVALAVNLEGK 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 ++ IGIP D D V L RR+D + E++ A+R Sbjct: 475 QVSPIDVATIGIPL-DEDMEAFIAEAQVDASEAVRGLKGDRRRDRLAVAEAVRLAVRRCA 533 Query: 539 KKVWGKKPLVTVFI 552 + GKKP+V V + Sbjct: 534 YRWIGKKPVVQVML 547 >gi|116513865|ref|YP_812771.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093180|gb|ABJ58333.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 614 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 144/564 (25%), Positives = 263/564 (46%), Gaps = 14/564 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + LGGV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + ++ IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 QYGDQVVGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++D S+ HS+P+++ +VI +P G IV+TGD+K D A TD Sbjct: 118 VIDADTEIDFKNTSVSFFHTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ Sbjct: 178 RLAEIAGNGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNLNRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG Sbjct: 238 QVFNAAAATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R + + E D V ++ E + + + G VI Sbjct: 298 RMGEPLQSLQKMANNRHRMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGH DL+ + ++P++LV + G+ L A K+LA++ G+ V +N Sbjct: 358 RN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPDDVYITQN 415 Query: 419 GKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRK 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y K+ ++ + + + ++ D L++ + S+L Sbjct: 476 KKKIVSEPQVTSRGF-VYINANHKLMNDSIQVIKDAIQANFEHKKFDWTELKQDMRSSLG 534 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V + ++++ R Sbjct: 535 KFLYKQTNRRPVVLPVVMEVNQNR 558 >gi|268319671|ref|YP_003293327.1| hypothetical protein FI9785_1199 [Lactobacillus johnsonii FI9785] gi|262398046|emb|CAX67060.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 591 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 137/562 (24%), Positives = 246/562 (43%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLQFFQ 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYADKIAGIFLTHGHADSIGALPYILRDHDIPVFGSKLTIELAKIAVQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKKGYRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K IY+I +N G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIYNIFENYDGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P +L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDNELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQMLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDAYALEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + + + ++ D L++ + + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGAADVIKEAINNNFEHKKFDWTELKQDVRNNVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|301066380|ref|YP_003788403.1| putative hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] gi|300438787|gb|ADK18553.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] Length = 560 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 13/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM + + D G+ +P ++L G+D+V PD +++ + Sbjct: 3 KINLVALGGVRENGKNMYAVE----VDDQIFVCDFGLKYPDNELLGIDVVIPDFSYLTEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + IF++H H D GAL VPV+ S I + + ++ +KK Sbjct: 59 ADRIAGIFLSHGHADAVGALPYFLVEHPVPVFGSELTIAMAKVFMQHDAQAKKFKDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D G S+ R HSIP ++ + I + G IV+TGD+K D A TD L Sbjct: 119 DEKSVIDFGDVSVSFFRTTHSIPGSLGIDIETSEGQIVYTGDFKFDPSATPMYQTDWARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGN+ +LAL+ DS NA +E I +I + + G ++V +S++ RI+ + Sbjct: 179 AQIGNKKVLALLSDSANAESPYPNANEHEIYDHIKETFEYQDGRIIVAGVASNIQRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--SDESFGLYPREQLIVIATGS 301 I+ A +GR++VL G ++++VV AI + IK + + E+ +++ TG Sbjct: 239 INAAASLGRRVVLTGRNVEKVVKTAIRMDYIKLPNEDVLAKTKELKALAPEKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ R + + E D V ++ E K+ + G V Sbjct: 299 MGEPMKSLQRMATSRHRLIHIHEGDLVFITTTIAHAMETMAARTKDMIYRAGGDVKVLGD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + +H SGH Y NDL+ M ++PQ LV + GE + AH E+A + GI + V G Sbjct: 359 D--IHSSGHAYKNDLQLMIDLLKPQYLVPVQGEYRLMAAHAEIAHEAGIPTANIFIVGMG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 +LR + V G + DG +G ++ + R+ L+ G V +D Sbjct: 417 DILRYEKGKMTASGHVNAGNTMIDGIGVGDIGNIVLRDRKMLAEDGIFIAVVTIDRKKKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G Y + V TV + D L++ + L L Sbjct: 477 VVSKPKVTSRGF-VYLKTSRDLLAESGTLVTDTVQKNLDNKEFDWTHLKQDVRDKLSRFL 535 Query: 539 KKVWGKKPLVTVFINKISRQ 558 + ++P++ I ++++ Sbjct: 536 FEQTKRRPVILPVIMEVNQN 555 >gi|123969393|ref|YP_001010251.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. AS9601] gi|123199503|gb|ABM71144.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. AS9601] Length = 662 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 298/561 (53%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD TF+ + + Sbjct: 26 LRVIPLGGLHEIGKNTCVFEYG----DELMLVDAGLAFPSDGMHGVNVVMPDTTFLKENQ 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + + +TH HEDH G + ++P+ Y A+ +L K VS + + Sbjct: 82 RRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVN 141 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HSI ++ +L + +PVG I+ TGD+K D + G+ D + + Sbjct: 142 PRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERM 201 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L + DSTNA G C SEK I ++ + AK V++TTF+SSV R+ I Sbjct: 202 VHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIAEAKERVILTTFASSVHRVTMI 261 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A D+G +K D LF+ + P + +++ TGSQ Sbjct: 262 LELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGSQ 321 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE ++V+L DTVIFS+ IPGN +++ + +RL++ G +V+ E Sbjct: 322 GEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGE 381 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + A G+ + + NG Sbjct: 382 -NIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHGKSAQTMGVPKENILIIENGD 440 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P+ I+ D V G+ L D G + +R+QL+ G ++V + + Sbjct: 441 VVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQLAGDGVVTVLAPISTDGKMV 500 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ + K+ + + + + P D ++ I Sbjct: 501 APPRVNLRGVVTT-AEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIE 559 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 560 NGLSRRMRRELQVEPLILCLV 580 >gi|260584721|ref|ZP_05852467.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] gi|260157744|gb|EEW92814.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] Length = 558 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 146/555 (26%), Positives = 268/555 (48%), Gaps = 13/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV E G ++ ++DCG+ +P+D+L G+D+V PD T++ + Sbjct: 4 IKIMALGGVRENGKSLYAVE----VDEDIFVLDCGLVYPEDELLGIDVVIPDFTYLEDNK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQ 124 + +F+TH H D GAL + PV+ + I L + + K Sbjct: 60 DRIAGVFLTHGHADAVGALPYFLKNIQAPVFGTELTIALAKYYVESSKQVKGFDDYHIVT 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D + +++ + H+IP+++A+V+++ G+IV+TGD+K D A +G ++ + Sbjct: 120 ENTEIDFESVTVKFFKTTHTIPDSVAIVLKTADGSIVYTGDFKFDQSAAVGYQSNFGRIT 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG E +LAL+ DS++A +S++ I+ +I D +NA G ++V +S++ RI+ + Sbjct: 180 DIGEEYVLALLSDSSDAESYEENVSDRKIEASILDTFRNATGRIIVACVASNILRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIVIATGSQ 302 + A + GRKI L G+ L+ +V++A+ + + LF++ ++++V+ TG+ Sbjct: 240 NAAHESGRKIFLTGAELEEIVNIALKLNKLTVPSEDLFVTARELKRLADDKIVVLETGNV 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP AL ++++G R V L + D V ++ E AI K+ + V+ Sbjct: 300 GEPIKALQKMAQGRHRQVNLHQGDLVYIATTPSTAMETAIARTKDMIYRAEAEVVEMADN 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 SGH PNDLK M ++P + + GE L+AH ELA + GI + G Sbjct: 360 AK--ASGHATPNDLKLMMNLLQPTFFIPVQGEYRSLLAHAELAHELGIPYSNIFIPGKGD 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 ++ L + +V G L DG +G ++ + R+ LS G V V + I Sbjct: 418 VIELSKGRMTATGQVPAGNVLVDGIGVGDIGNIVLKDRKILSEDGIFVVVVTISRRLGKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+IV G Y ++ + K V V + + L++ + L L Sbjct: 478 LSGPQIVSRGF-VYMKTSEELLQESQKIVTDIVEENLASDNFEWPRLKQEVRDGLSRYLF 536 Query: 540 KVWGKKPLVTVFINK 554 + ++P++ I + Sbjct: 537 EQTKRRPVILPIIME 551 >gi|322379601|ref|ZP_08053938.1| UPF0036 protein [Helicobacter suis HS1] gi|322380212|ref|ZP_08054443.1| ATP-binding metallo-beta-lactamase [Helicobacter suis HS5] gi|321147378|gb|EFX42047.1| ATP-binding metallo-beta-lactamase [Helicobacter suis HS5] gi|321147995|gb|EFX42558.1| UPF0036 protein [Helicobacter suis HS1] Length = 658 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 164/554 (29%), Positives = 293/554 (52%), Gaps = 11/554 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + PLGG+GEIG NM + + + I+ID G+SFP +D+ GVD++ PD +++ Sbjct: 108 KARVKITPLGGLGEIGGNMMVIE----TLNQAIIIDVGMSFPSEDMHGVDILIPDFSYLH 163 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 ++ ++ + ITHAHEDH GA+ L+ L P+Y +P ++G++ K + K K Sbjct: 164 SIKEKIVGVIITHAHEDHIGAVPYLFKELQFPLYGTPLSLGMIGNKFDEHGLKKFKNYFK 223 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q + +G F+IE + + HSI + AL I++ VG I+HTGD+K+D + TD Sbjct: 224 IVQKRQPIQIGEFTIEWIHITHSIIDASALAIQTKVGTIIHTGDFKIDHTPVDNIPTDLY 283 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G++ L+ DSTN+ + G SE I ++ KNA G V+++TFSS++ R+ Sbjct: 284 RLAYYGEQGVMLLLSDSTNSYKTGITPSESSIGPVFDNLFKNATGRVIMSTFSSNIHRVY 343 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GRK+ ++G S+++ + +A ++G I + F+ +P ++ ++ TG Sbjct: 344 QAIQYAINYGRKVAVIGRSMEKNLDIARELGYIHLPSKAFIEAHEVEKHPDHEVFIVTTG 403 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++ + D +I S++AIPGNE ++ I N L+++ +V+ + Sbjct: 404 SQGETMSALYRMATDEHRHISIKPSDLIILSAKAIPGNEASVSSILNLLMKKEAQVVYQS 463 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + +HVSGH + K M + I+P+ + IHGE H+ HKE A+ GI + + + Sbjct: 464 FD--IHVSGHAAQEEQKLMLRLIKPKFFLPIHGEYNHVARHKETAIACGIPEKNIYLMED 521 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + P+ + V G D + + R++++ G LS + + Sbjct: 522 GDQVEVNPNFMRKTKSVKSGKSYVDNTNNISIEERIVQDRQEIASAGLLSAVLFISKAGE 581 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + +I +GI + + + + L ++ + L + K L +++ + LR L Sbjct: 582 LMPTSQITTLGIVNFKEERS-LLEELQGSLSLHIKALRFDVISNTKHLEDNVRNFLRKAL 640 Query: 539 KKVWGKKPLVTVFI 552 K K P + + Sbjct: 641 FKHTKKYPAIVSHV 654 >gi|15892536|ref|NP_360250.1| hypothetical protein RC0613 [Rickettsia conorii str. Malish 7] gi|238650288|ref|YP_002916140.1| hypothetical protein RPR_00585 [Rickettsia peacockii str. Rustic] gi|15619697|gb|AAL03151.1| unknown [Rickettsia conorii str. Malish 7] gi|238624386|gb|ACR47092.1| hypothetical protein RPR_00585 [Rickettsia peacockii str. Rustic] Length = 560 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 205/552 (37%), Positives = 322/552 (58%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y +W+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----QGQWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYITTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 126 VKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G +K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KL KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGLLAAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|315635456|ref|ZP_07890722.1| metallo-beta-lactamase [Arcobacter butzleri JV22] gi|315480214|gb|EFU70881.1| metallo-beta-lactamase [Arcobacter butzleri JV22] Length = 640 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 154/554 (27%), Positives = 293/554 (52%), Gaps = 12/554 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L PLGG+ EIG NM + + + I++D G+SFP ++ GVD++ PD T+I + Sbjct: 90 KLKITPLGGLNEIGGNMMVVE----TENEAIIVDVGMSFPDGEMHGVDILIPDFTYIREI 145 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCISF 123 + ++A+ ITH HEDH GA+ L+ + P+Y + + ++ +K ++ + + Sbjct: 146 KDKVVAVIITHGHEDHIGAMPYLFKEMQFPIYGTSLPLEMIGSKFDEHKMREHRGYFRAI 205 Query: 124 QAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G F +E + + HSI ++ A+ I++ G ++HTGD+K+D I G TD Sbjct: 206 SKRTPIKIGNDFEVEWMHITHSIIDSSAVAIKTEAGTMIHTGDFKIDHTPIDGFPTDLHR 265 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G EG+L L DSTN+ G +EK + I +AKG V+++TFSS++ R+ Sbjct: 266 LAHYGEEGVLVLTSDSTNSHSPGFTRTEKTVGPTFDKIFSSAKGRVVMSTFSSNIHRVAQ 325 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A GRKI ++G S+++ + +A+++G I F+ Y ++++++ TGS Sbjct: 326 AIEKALIYGRKICVIGRSMEKNLEIAMNLGYIKFPKDQFIEAHEVNKYNDKEVLIVTTGS 385 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE SAL +++ E R++K+ +D +I SS+AIPGNE ++ I N L++ G +V +D Sbjct: 386 QGESMSALYRMAIHEHRHIKIKPEDQIILSSKAIPGNEASVSEIINHLLKAGAKVAYQDF 445 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +HVSGH + K M + ++P+ + +HGE H + H + + G+ V + +G Sbjct: 446 -PDIHVSGHAGQEEQKLMLRLVKPKFFLPVHGEYNHALKHGQTGVDCGVLERNVYIMSDG 504 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 + + + P ++ + V G D L + +D + R+ ++ G + + ++ + Sbjct: 505 EQIEVTPKYLKKVKTVKSGKVYIDNQLNHRISDDVVLDRQTMAKEGIVMIVAQINENDRT 564 Query: 480 FG-VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 P++ G+ + D K + + + ++ K+ ++L + + +R Sbjct: 565 LAQKPKVSSFGLVSDKQDK-YFVKEIEDILGVFLENVKPGILKNNRILEDELRKVVRKHC 623 Query: 539 KKVWGKKPLVTVFI 552 + + K P++ I Sbjct: 624 TRKYKKYPMIVPTI 637 >gi|116629805|ref|YP_814977.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus gasseri ATCC 33323] gi|238853436|ref|ZP_04643815.1| ribonuclease J 2 [Lactobacillus gasseri 202-4] gi|282851690|ref|ZP_06261055.1| conserved hypothetical protein [Lactobacillus gasseri 224-1] gi|116095387|gb|ABJ60539.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus gasseri ATCC 33323] gi|238834008|gb|EEQ26266.1| ribonuclease J 2 [Lactobacillus gasseri 202-4] gi|282557658|gb|EFB63255.1| conserved hypothetical protein [Lactobacillus gasseri 224-1] Length = 591 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 137/562 (24%), Positives = 248/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLDFFR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYGDKIAGIFLTHGHADSIGALPYILRDYDIPVFGSKLTIELAKIAVQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKEGFRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K I++I +N +G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIFNIFENYEGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P ++L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDKELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQLLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDAYALEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + V + + ++ D L++ + + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGASDVIKEAVNNNFEHKKFDWTELKQDVRNDVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|229586723|ref|YP_002845224.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Rickettsia africae ESF-5] gi|228021773|gb|ACP53481.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Rickettsia africae ESF-5] Length = 560 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 205/552 (37%), Positives = 321/552 (58%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y +W+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----QGQWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW L P+Y + F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWHRLKCPIYITTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 126 VKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G +K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KL KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGLLAAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|313901142|ref|ZP_07834630.1| ribonuclease J 1 [Clostridium sp. HGF2] gi|312954100|gb|EFR35780.1| ribonuclease J 1 [Clostridium sp. HGF2] Length = 612 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 165/552 (29%), Positives = 270/552 (48%), Gaps = 13/552 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +GG+GE+G NM + + + ++ID GV FP+++L GVD V PD +++K + Sbjct: 36 IYAMGGLGEVGKNMYCFEH----ENEILIIDSGVRFPEENLLGVDYVIPDYNYLVKNNRK 91 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + ITH HEDH G + L + + +YA FA+ L+ K R+ + + I Sbjct: 92 RKVLIITHGHEDHIGGIPFLLKSVDIEAIYAPAFAVALINKKLEERRMLRSVKIIEINDR 151 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 V + F+ HSIP+++ ++I +P G IVHTGD+K D + +D + + Sbjct: 152 SSVKMQHFTCGFFNTTHSIPDSLGILINTPNGRIVHTGDFKFDLTPVGT-NSDYQVMAYM 210 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G G+ L+ DSTN+ E ISEK + I D MK G ++V TF+S+V R+ I++ Sbjct: 211 GQIGVDLLLSDSTNSGVEDFSISEKKVAAEILDTMKKTSGRLIVATFASNVYRVSQILEA 270 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GRK+++ G S++ VV++ +G IK +Q FLS + G P + ++ TGSQGEP Sbjct: 271 AVACGRKVIIFGRSMENVVTIGRKMGKIKVGEQHFLSPDQLGRTPANKTCIVCTGSQGEP 330 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ G R +KL DTV+FSS IPGN ++ + N+L G V+ + + Sbjct: 331 LAALSRIANGTHRYIKLIPGDTVVFSSSPIPGNGASVNQVVNKLFRAGANVLTKSILSNL 390 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP---VRNGKML 422 H +GH + K M Q I+P+ + IHGE LV HKE + G+A ++ Sbjct: 391 HTTGHASQEEQKLMLQLIKPKYFMPIHGEYKMLVQHKETGKETGLADDHIFTCANGDVLI 450 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFG 481 E + DG I + + R L+ G ++ + +D + Sbjct: 451 LRNHQVFESSWRIQADDIYVDGNDISGVSTAVLKDRTILADNGLVAAIIAIDSKENKVLC 510 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P IV G + D + + + V + + + R L+ + S L L Sbjct: 511 KPVIVSRGF-VFIKDSQGLLREAEQIVYAALNEKMKE-RTTFSELKNCVRSTLEPFLYNK 568 Query: 542 WGKKPLVTVFIN 553 + P+V I Sbjct: 569 THRNPIVIPVII 580 >gi|326693738|ref|ZP_08230743.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc argentinum KCTC 3773] Length = 618 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 138/564 (24%), Positives = 253/564 (44%), Gaps = 15/564 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + + D G+ +P+ D GVD+V PD +++K Sbjct: 3 DLSIIPFGGVRENGKNMYAV----TVNDEIFIFDAGLKYPETDQLGVDVVVPDFEYLIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPCISF 123 + +F++H H D GAL ++VP++ S I L + + ++ Sbjct: 59 SDKIAGVFLSHGHADAIGALPYFLQQVNVPIFGSELTIELAKLAIKEQPALADYDDYHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ HSIP+++ +V+ +P G IV+TGD+K D A TD L Sbjct: 119 NEKTEIDFGDVTVSFFNTTHSIPDSLGVVLGTPYGQIVYTGDFKFDQTANQSYRTDIARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRS 242 +G +LAL+ D+ EG ++E I I D ++ K ++V +S++ RI+ Sbjct: 179 VEVGQGKVLALLGDAAGTGNEGDSVNESKIGDYILDAFRDNKQKRIIVAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID R++VL G+ ++ VV AI + + +LF++ ++ P + +++ Sbjct: 239 VIDATVATKRQLVLSGNDIENVVRTAIRLRKLHLPIPESKLFVNLKNAKNLPAAETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE +++ E D V ++ E + ++ L +QG V Sbjct: 299 TGRMGEPIKHLNRMANGEDPYIRIGEADLVFITTTPSTAMEGIVAKTRDMLFKQGADVKQ 358 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + + SGH NDL+ M ++P+ + I GE + + + A + + + Sbjct: 359 ISTD--LRSSGHASRNDLQMMINVLQPEYFMPIQGEYRVMNSARAAAEEVNVAPDHIMMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G D E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFTWLGDHFELKDSFTIGETLIDGAGIGDIGNVVLRDRRILSEDGIFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P++ G + + + TV L + D L+ + L Sbjct: 477 KRQVVSKPKLTSRGFVYVKANRDLMKEAADLTVSQIEKYLNTTKSFDWNELKNGVREVLS 536 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L + ++P+V + ++++ R Sbjct: 537 RYLFEQTRRRPMVMPVVMEVNQNR 560 >gi|78780129|ref|YP_398241.1| hypothetical protein PMT9312_1744 [Prochlorococcus marinus str. MIT 9312] gi|78713628|gb|ABB50805.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 660 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 298/561 (53%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD TF+ + + Sbjct: 26 LRVIPLGGLHEIGKNTCVFEYG----DELMLVDAGLAFPSDGMHGVNIVMPDTTFLRENQ 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + + +TH HEDH G + ++P+ Y A+ +L K VS + + Sbjct: 82 RRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVN 141 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HSI ++ +L + +PVG I+ TGD+K D + G+ D + + Sbjct: 142 PRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERM 201 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L + DSTNA G C SEK I ++ + AK V++TTF+SSV R+ I Sbjct: 202 VHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYSSLEKHIAEAKERVILTTFASSVHRVTMI 261 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A D+G +K D LF+ + P + +++ TGSQ Sbjct: 262 LELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGSQ 321 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE ++V+L DTVIFS+ IPGN +++ + +RL++ G +V+ E Sbjct: 322 GEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGE 381 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + A G+ + + NG Sbjct: 382 -NIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHGKSAQTMGVPKDNILIIENGD 440 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P+ I+ D V G+ L D G + +R+QL+ G ++V + + Sbjct: 441 VVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQLAGDGVVTVLAPISTDGKMV 500 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ + K+ + + + + P D ++ I Sbjct: 501 APPRVNLRGVVTT-AEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIE 559 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 560 NGLSRRMRRELQVEPLILCLV 580 >gi|323340662|ref|ZP_08080914.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] gi|323091785|gb|EFZ34405.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] Length = 590 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 257/561 (45%), Gaps = 13/561 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E NM + ++DCG+ +P+++L G+D V PD ++ + Sbjct: 3 DIKIIALGGVRENAKNMYVVE----VDDNIYILDCGLKYPENELLGIDTVIPDFEYLRQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + ++ +F+TH H D GAL S VPV+ S I L + E +K Sbjct: 59 ARRIVGVFLTHGHADAIGALPYFVSEFDVPVFGSELTIELAKIACANEDAAKDFDDFHIV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D + ++ + HS+PE+ +V+++ GNIV+TGD+K D A +G TD L Sbjct: 119 DEKTEIDFESATVSFFKTTHSVPESFGIVVKTRKGNIVYTGDFKFDQTAAVGYKTDLGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG+EG+LAL+ DS NA + E I I + + KG ++V +S++ R++ I Sbjct: 179 AEIGHEGVLALLSDSANAENPKETVDEHVIFDFISETFEYHKGRIIVACVASNILRVQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 + A RK+VL G +++V A+ + + D L + + Y ++++++ TG Sbjct: 239 FEAASANDRKVVLTGHDAEKIVKTAMRLNKLHLPSDDLLVPLKDIKKYNDDEVVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G R V + E D V ++ E + ++ + G V A Sbjct: 299 SGEPLKSLQKMALGRHRAVNIHEGDLVFITTTPSHAVETTVAKTRDMIYRAGGTVKAISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 E + SGH NDL+ M + P+ + + GE + A+ + A GI + + G Sbjct: 359 E--FNSSGHASKNDLELMMNLLEPEYVFPVQGEYRLMSANADCASAIGIDDDHIFLLNKG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 + D + + V G + DG IG ++ + R+ LS G V +D Sbjct: 417 DVAEFENDKMIVASSVESGNTMIDGSGIGDIGNIVLRDRKILSEDGIFIAVVTIDRKKNK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I VP+I G Y + V V + D L++ + L L Sbjct: 477 IVDVPKIATRGF-VYVKTSRDLMAESSDLVANVVQQNLDNKEYDWSHLKQDVRDQLNHFL 535 Query: 539 KKVWGKKPLVTVFINKISRQR 559 + + P++ I +I+ +R Sbjct: 536 YEQTKRHPVILPVIMEINARR 556 >gi|126697180|ref|YP_001092066.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9301] gi|126544223|gb|ABO18465.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9301] Length = 661 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 298/561 (53%), Gaps = 20/561 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD TF+ + + Sbjct: 26 LRVIPLGGLHEIGKNTCVFEYG----EELMLVDAGLAFPSDGMHGVNVVMPDTTFLKENQ 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + + +TH HEDH G + ++P+ Y A+ +L K VS + + Sbjct: 82 RRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVN 141 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D V VG FS+E +R HSI ++ +L + +PVG I+ TGD+K D + G+ D + + Sbjct: 142 PRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERM 201 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L + DSTNA G C SEK I ++ + AK V++TTF+SSV R+ I Sbjct: 202 VHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIAEAKERVILTTFASSVHRVTMI 261 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 +++A + GRK+ LLG S+ V++ A D+G +K D LF+ + P + +++ TGSQ Sbjct: 262 LELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGSQ 321 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +AL+++SRGE ++V+L DTVIFS+ IPGN +++ + +RL++ G +V+ E Sbjct: 322 GEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGE 381 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +HVSGH + D K M +P+ V +HGE LV H + A G+ + + NG Sbjct: 382 -NIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHGKSAQTMGVPKDNILIIENGD 440 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P+ I+ D V G+ L D G + +R+QL+ G ++V + + Sbjct: 441 VVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQLAGDGVVTVLAPISTDGKMV 500 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ + K+ + + + + P D ++ I Sbjct: 501 APPRVNLRGVVTT-AEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIE 559 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 + L +++ +PL+ + Sbjct: 560 NGLSRRMRRELQVEPLILCLV 580 >gi|104773858|ref|YP_618838.1| metallo-beta-lactamase family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422939|emb|CAI97601.1| Putative hydrolase (metallo-beta-lactamase superfamily) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 614 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 144/564 (25%), Positives = 263/564 (46%), Gaps = 14/564 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + LGGV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + ++ IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 QYGDQVVGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++D S+ HS+P+++ +VI +P G IV+TGD+K D A TD Sbjct: 118 VIDADTEIDFKNASVSFFHTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ Sbjct: 178 RLAEIAGNGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNLNRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG Sbjct: 238 QVFNAAAATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R + + E D V ++ E + + + G VI Sbjct: 298 RMGEPLQSLQKMANNRHRMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGH DL+ + ++P++LV + G+ L A K+LA++ G+ V +N Sbjct: 358 RN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPDDVYITQN 415 Query: 419 GKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRK 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y K+ ++ + + + ++ D L++ + S+L Sbjct: 476 KKKIVSEPQVTSRGF-VYINANHKLMNDSIQVIKDAIQANFEHKKFDWTELKQDMRSSLG 534 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V + ++++ R Sbjct: 535 KFLYKQTNRRPVVLPVVMEVNQNR 558 >gi|50365387|ref|YP_053812.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] gi|50363943|gb|AAT75928.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] Length = 588 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 277/552 (50%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ EIG N + + IMID GV FP D + G++ V PD +++ + Sbjct: 40 KVFALGGLEEIGKNTYCIEH----ENEIIMIDAGVKFPDDSMLGINAVIPDYSYLKENES 95 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G +H L +++P +YA A L+ + +++ K + A Sbjct: 96 KIKALFITHGHEDHIGGIHYLVKQVNIPVIYAPELAAALIRDRLKEHKLTDKTIVKEYVA 155 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D + +NHSIP+ +++ +P GNI TGD+K D + + L + Sbjct: 156 DDIWATKNLRVSYAALNHSIPDAFGILVETPNGNIFSTGDYKFDWSPLGHF-AELSKLAS 214 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G++GI LM DSTNA EG EKGI +NI + AKG + +TTF+S+V RI+ I++ Sbjct: 215 MGDKGIELLMSDSTNAEVEGYTPGEKGIIENIDKLFLKAKGRIFITTFASNVHRIQQIVE 274 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A + +K+V+LG S++R++ + +G +K D++F+ +P ++++I+TGSQGE Sbjct: 275 LANKYDKKVVILGRSIERIIKIIRQMGHLKINDKMFIKANDIDKHPANKIMIISTGSQGE 334 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ +++ + DTVIFSS IPGN + + NRL G VI Sbjct: 335 PMAALSRIATNRHQSISIIPGDTVIFSSSPIPGNRADVEILINRLTRIGANVIESSPSNR 394 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ +RP + +HGE L H E A + + NG L Sbjct: 395 IHTSGHASQEEQKLLFTLLRPNYFMPMHGEFRMLKKHIETAESVNLQKGHGFVMANGDQL 454 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L +I V DG + A I +R LS G +SV V +D+ + Sbjct: 455 ELLQGNAQIGKRVDADAIYVDGKDMTAHASNIIRERDILSKDGLISVVVSIDSQTNKLLC 514 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G + + V + ++ + ++++I +L + K Sbjct: 515 APRIISRG-SFYVKDSGNVISEAITIVTEAINEVLNSNKPTFGAIKKAIKQSLSPYIFKT 573 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 574 KRRNPLIIPVIL 585 >gi|315444911|ref|YP_004077790.1| hydrolase of the metallo-beta-lactamase superfamily [Mycobacterium sp. Spyr1] gi|315263214|gb|ADT99955.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Mycobacterium sp. Spyr1] Length = 558 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ + + +++DCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGIGEIGRNMTVFEHL----GRLLIVDCGVLFPTHDEPGVDLILPDLRHVQDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +THAHEDH GA+ + +P+ S F + L+ K R+S K+ ++ Sbjct: 72 DDVEAIVVTHAHEDHIGAIPFVLKQRADIPIVGSKFTLALIAEKCREHRLSPKLVEVTEG 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G F + VNHS+P +A+ I + G ++HTGD KLD G TD + Sbjct: 132 TKSTH--GVFECQYFAVNHSVPGCLAIGIHTGAGTVLHTGDIKLDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTN+ G SE + ++ +M+ A G V+V F+S+V R++SII Sbjct: 190 RLGDAGVDLFLCDSTNSEIPGVGPSESEVGPALHRLMRGADGRVIVACFASNVDRVQSII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G +K D+ L + + P +++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGYLKVADEDVLDIAAAEMMPADRVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL+++SRGE R++ L D +I SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDSLAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALAARTGVPDENIKIAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L + + V G DG + G D + +R LS G ++V V++ Sbjct: 429 VDLVAGRVSVAGSVPVGKMFVDGLVTGDVGDATLGERLILS-SGFVAVTVVVRRGTGKAV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + G + K + + V + L + + + + A+ + + Sbjct: 488 APAHLHARGFS----EDPKALEPAARKVEAELEHLASQNVTEPTRIAQGVRRAVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + +I Sbjct: 544 TYRRQPMIVPTVIEI 558 >gi|157736323|ref|YP_001489006.1| hypothetical protein Abu_0052 [Arcobacter butzleri RM4018] gi|157698177|gb|ABV66337.1| conserved hypothetical protein, predicted hydrolase of the metallo-beta-lactamase superfamily [Arcobacter butzleri RM4018] Length = 640 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 155/554 (27%), Positives = 293/554 (52%), Gaps = 12/554 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L PLGG+ EIG NM + + + I++D G+SFP ++ GVD++ PD T+I + Sbjct: 90 KLKITPLGGLNEIGGNMMVVE----TENEAIIVDVGMSFPDGEMHGVDILIPDFTYIREI 145 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCISF 123 + ++A+ ITH HEDH GA+ L+ + P+Y + + ++ +K ++ + + Sbjct: 146 KDKIVAVIITHGHEDHIGAMPYLFKEMQFPIYGTSLPLEMIGSKFDEHKMREHRGYFRAI 205 Query: 124 QAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G F +E + + HSI ++ A+ I++ G ++HTGD+K+D I G TD Sbjct: 206 SKRTPIKIGNDFEVEWMHITHSIIDSSAVAIKTEAGTMIHTGDFKIDHTPIDGFPTDLHR 265 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G EG+L L DSTN+ G +EK + I +AKG V+++TFSS++ R+ Sbjct: 266 LAHYGEEGVLVLTSDSTNSHSPGFTRTEKTVGPTFDKIFSSAKGRVVMSTFSSNIHRVAQ 325 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A GRKI ++G S+++ + +A+++G I F+ Y ++++++ TGS Sbjct: 326 AIEKALIYGRKICVIGRSMEKNLEIAMNLGYIKFPKDQFIEAHEVNKYNDKEVLIVTTGS 385 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE SAL +++ E R++K+ +D +I SS+AIPGNE ++ I N L++ G +V +D Sbjct: 386 QGESMSALYRMAIHEHRHIKIKPEDQIILSSKAIPGNEASVSEIINHLLKAGAKVAYQDF 445 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +HVSGH + K M + I+P+ + +HGE H + H + + G+ V + +G Sbjct: 446 -PDIHVSGHAGQEEQKLMLRLIKPKFFLPVHGEYNHALKHGQTGVDCGVLERNVYIMSDG 504 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 + + + P ++ + V G D L + +D + R+ ++ G + + ++ + Sbjct: 505 EQIEVTPKYLKKVKTVKSGKVYIDNQLNHRISDDVVLDRQTMAKEGIVMIVAQINENDRT 564 Query: 480 FG-VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 P++ G+ + D K + + + ++ K+ ++L + + +R Sbjct: 565 LAQKPKVSSFGLVSDKQDK-YFVKEIEDILGVFLENVKPGILKNNRILEDELRKVVRKHC 623 Query: 539 KKVWGKKPLVTVFI 552 + + K P++ I Sbjct: 624 TRKYKKYPMIVPTI 637 >gi|329667523|gb|AEB93471.1| hypothetical protein LJP_1149c [Lactobacillus johnsonii DPC 6026] Length = 591 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 246/562 (43%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLQFFQ 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYADKIAGIFLTHGHADSIGALPYILRDHDIPVFGSKLTIELAKIAIQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKKGYRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K IY+I +N G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIYNIFENYDGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P +L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDNELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQMLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDAYALEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + V + + ++ D L++ + + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGAADVIKEAVNNNFEHKKFDWTELKQDVRNDVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|145224580|ref|YP_001135258.1| beta-lactamase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145217066|gb|ABP46470.1| beta-lactamase domain protein [Mycobacterium gilvum PYR-GCK] Length = 558 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 286/555 (51%), Gaps = 17/555 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+GEIG NM ++ + + +++DCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGIGEIGRNMTVFEHL----GRLLIVDCGVLFPTHDEPGVDLILPDLRHVQDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +THAHEDH GA+ + +P+ S F + L+ K R+S K+ ++ Sbjct: 72 DDVEAIVVTHAHEDHIGAIPFVLKQRADIPIVGSKFTLALIAEKCREHRLSPKLVEVTEG 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G F + VNHS+P +A+ I + G ++HTGD KLD G TD + Sbjct: 132 TKSTH--GVFECQYFAVNHSVPGCLAIGIHTGAGTVLHTGDIKLDQLPPDGRPTDLPGMS 189 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ G+ +CDSTN+ G SE + ++ +M+ A G V+V F+S+V R++SII Sbjct: 190 RLGDAGVDLFLCDSTNSEIPGVGPSESEVGPALHRLMRGADGRVIVACFASNVDRVQSII 249 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQG 303 D A +GR++ +G S+ R + +A ++G +K D+ L + + P +++++I TG+QG Sbjct: 250 DAAVALGRRVSFVGRSMVRNMGIARELGYLKVADEDVLDIAAAEMMPADRVVLITTGTQG 309 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP +AL+++SRGE R++ L D +I SS IPGNE A+ + + L + G RV+ + Sbjct: 310 EPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDSLAKIGARVVTNA-QA 368 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 VHVSGH Y +L +Y +RP+ ++ +HG L A+ LA + G+ + NG Sbjct: 369 RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALAARTGVPDENIVIAENGVS 428 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + L + + V G DG + G D + +R LS G ++V V++ Sbjct: 429 VDLVAGRVSVAGSVPVGKMFVDGLVTGDVGDATLGERLILS-SGFVAVTVVVRRGTGKAV 487 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + G + K + + V + L + + + + A+ + + Sbjct: 488 APAHLHARGFS----EDPKALEPAARKVEAELEHLASQNVTEPTRIAQGVRRAVGKWVGE 543 Query: 541 VWGKKPLVTVFINKI 555 + ++P++ + +I Sbjct: 544 TYRRQPMIVPTVIEI 558 >gi|259503084|ref|ZP_05745986.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259168950|gb|EEW53445.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 612 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 153/557 (27%), Positives = 267/557 (47%), Gaps = 12/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ + Sbjct: 63 KIKIIPFGGVRENGKNMYAVE----VDDQIFILDTGLKYPENELMGIDVVIPDWEYLRER 118 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 119 KDKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKKHKEVKKFNDFHVV 178 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD L Sbjct: 179 DASTAIDFNDVTVSFFQTTHTIPETLGVVLETAEGNIVYTGDFKFDQTATKGYQTDLARL 238 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG++G+LAL+ DS A G EK I + I + K G ++V + +S++ R++ I Sbjct: 239 AEIGSQGVLALLSDSAGAGITGASSREKDIGEYIKETFKYQDGRIIVASVASNIMRVQQI 298 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQ 302 ID A + RKIVL GS ++++++ A+D+G + + +S + +Q++++ TG Sbjct: 299 IDAAVAVDRKIVLSGSDIEQIINTAMDLGKLKMPKDILISLKEADKLDPQQVVILETGKM 358 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +L Q++ G+ +KL+++D V ++ E + K+ + G V + Sbjct: 359 GEPIKSLQQIASGDNPKIKLSDQDLVFVTTTPSYAQETEVQKTKDIIYRTGAEVKFISDD 418 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 ++ SGH ND + M +++P+ + I GE L H ELA + GIA + G Sbjct: 419 --LNPSGHANQNDQQLMLNFMKPKNFIPIQGEYRLLDRHAELAEEVGIAPDRIFLTNKGD 476 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 +L + + + G + DG IG ++ + RR LS G V +D I Sbjct: 477 VLTYDQGEFHVGEHLDVGNTMIDGTGIGDIGNIVLRDRRVLSEDGIFVVVATIDRKKKKI 536 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I G + ++ K V V D + D L++ + L L Sbjct: 537 VARPQITSRGF-VFVKTNHQLMKQSADLVERVVQDNLDQKEFDWGHLKQDVREKLNRFLF 595 Query: 540 KVWGKKPLVTVFINKIS 556 + P++ I +I+ Sbjct: 596 DQTKRHPVILPVIMEIN 612 >gi|83319447|ref|YP_424591.1| metallo-beta-lactamase superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283333|gb|ABC01265.1| metallo-beta-lactamase superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 611 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 169/552 (30%), Positives = 278/552 (50%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++++ +K Sbjct: 62 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLVENQK 117 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ + ++ K + A Sbjct: 118 KIKALFITHGHEDHIGGIQYLVQQVKIPVIYAPKLAAMLIRDRLKEYKIEDKTIVKEYDA 177 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 178 DDVWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 236 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + AKG + +TTF+S+V RI+ II+ Sbjct: 237 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQAKGRIFLTTFASNVHRIQHIIE 296 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 297 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 356 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DTV+FSS IPGN + + N+L G +VI ++ Sbjct: 357 PMAALSRIANNKHLSINIIPGDTVVFSSSPIPGNRADVEKLVNKLTRVGAKVIENTSDNK 416 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 417 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHVETGESVNLEKGNGFIMANGDVL 476 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 L +I V DG + A I +R LS G ++V + LD+ N + Sbjct: 477 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNRLIA 536 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+L + +V Sbjct: 537 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSLSPYIFRV 595 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 596 KRRNPLIIPVIL 607 >gi|313681243|ref|YP_004058981.1| RNA-metabolising metallo-beta-lactamase [Sulfuricurvum kujiense DSM 16994] gi|313154103|gb|ADR32781.1| RNA-metabolising metallo-beta-lactamase [Sulfuricurvum kujiense DSM 16994] Length = 694 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 155/557 (27%), Positives = 276/557 (49%), Gaps = 14/557 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+++ PLGG+GEIG N+ + + + I+ID G+SFP +++ GVD++ PD T++ Sbjct: 143 NNDKVRITPLGGLGEIGGNITVIE----TENEAIIIDIGMSFPDEEMHGVDILVPDFTYL 198 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + RK ++A+ ITHAHEDH G + + + P+Y +P + ++ K + + Sbjct: 199 REIRKKIVAVIITHAHEDHIGGVPYFFKEMQFPIYGTPLPLAMIGNKFDEHHMRDFRRYF 258 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +G F IE + + HSI ++ +L I + G I+HTGD+K+D + G D Sbjct: 259 NPIVKRIPYKIGNDFEIEWMHMTHSIIDSSSLAITTKAGTIIHTGDFKIDHTPVDGYTAD 318 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTN+ + SE + I A+G V+++TFSS++ R Sbjct: 319 LHRLAHYGEKGVLCLLSDSTNSYNKEWTPSELTVAPGFDRIFSKAEGRVIMSTFSSNIHR 378 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I + RK+ ++G S++R + V + IK +F+ E + ++++ Sbjct: 379 VYQAILTGIKYNRKVCVIGRSMERNLEVCMQYDYIKLPKNIFIDAEEANRMSDKDVLIVT 438 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL +++ GE R++K+ D ++ S+RAIPGNE +I + N L G RV Sbjct: 439 TGSQGEPSSALFRMAIGEHRHIKIKPTDLIVLSARAIPGNEGSISGMLNYLQRAGARVA- 497 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH + K M + P+ + +HGE H++ HKE A+ G+ + + Sbjct: 498 --NDRDIHVSGHASMEEQKLMLRLTNPKFFLPVHGEYNHIMKHKETAVTCGVPERNILLM 555 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +G + + + V G D + D I R++++ G + + + Sbjct: 556 SDGDSIEVNTKMMRKAKTVKTGKTYIDNQNNHQIEDDIIIDRQKMASEGMVMLVAQVSAA 615 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P + GI A D + + +++L ++ K L + +R Sbjct: 616 ESRLLSKPLVTSFGIVADRHDKAFAL-EMEDVLEHFLINLKPGLIENPKALENDLRQVVR 674 Query: 536 SLLKKVWGKKPLVTVFI 552 + + K PL+ + Sbjct: 675 KHIYRKMKKYPLIVPHV 691 >gi|328957269|ref|YP_004374655.1| ribonuclease J2 [Carnobacterium sp. 17-4] gi|328673593|gb|AEB29639.1| ribonuclease J2 [Carnobacterium sp. 17-4] Length = 559 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 140/556 (25%), Positives = 259/556 (46%), Gaps = 13/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM ++DCG+ FP+ +L G+D+V PD +++ + Sbjct: 3 TIKIIPLGGVRENGKNMYAVE----VDEDIFVLDCGLMFPETELLGIDVVIPDFSYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISF 123 + + A+F+TH HED GAL VPV+ + I L + + +VS Sbjct: 59 KNRVTAVFLTHGHEDAIGALPYFLQKFDVPVFGTELTIALAKLFVEKDSQVSTFDDYHIV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++ G R +H+IP+++ + +++ G+IV+TGD+K D A ++ + Sbjct: 119 DENTEIEFGDVVASFFRTSHTIPDSVGVALKTDEGSIVYTGDFKFDQSAKPMYQSNLSRI 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +LAL+ DS+ A IS+ + + + D +NA G ++V + +S++ RI+ + Sbjct: 179 ADIGKNKVLALLSDSSEAESPVENISDLKVAEEVLDTFQNASGRIIVASVASNILRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + +KI + GS+L+ +V +A+ + + + L + Y +++V+ TG Sbjct: 239 FDAAHKSHKKIFITGSNLEEIVQIAMQLNKLQLPNEDLIVPITEIEKYSDHEIVVLETGV 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP L ++++G+ V + E D V + EV + +N + G V Sbjct: 299 TGEPIKTLTRMAKGKHSQVNIKEGDLVYIVTSPSTAMEVTVAQAENLIYRAGGTVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + SGH PNDLK M I+P + + GE L AH +LA + + G Sbjct: 359 N--LKASGHATPNDLKLMINLIKPTYFIPVQGEYRMLSAHAKLAHEVGMPYKNIFIPGKG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 ++ + + + +V G + DG IG ++ + R+ LS G V ++ Sbjct: 417 DIMEYKNERMHVAGQVTAGNTMVDGIGIGDIGNIVLRDRKLLSEDGIFVAVVTINRRKSK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I PE++ G Y + + + + V + + + L++ I AL L Sbjct: 477 IISGPEVMTRGF-VYVKENTDLINQSNEIIREVVEENLNRKEFEWSRLKQEIRDALNKHL 535 Query: 539 KKVWGKKPLVTVFINK 554 + ++P++ I + Sbjct: 536 FEQTRRRPVILPIIME 551 >gi|313123475|ref|YP_004033734.1| hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280038|gb|ADQ60757.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 613 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 143/564 (25%), Positives = 264/564 (46%), Gaps = 14/564 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + LGGV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + ++ IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 QYGDQVVGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++D S+ + HS+P+++ +VI +P G IV+TGD+K D A TD Sbjct: 118 VIDADTEIDFKNASVSFFQTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMT 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ Sbjct: 178 RLAEIAENGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNINRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG Sbjct: 238 QVFNAAAATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ + + + E D V ++ E + + + G VI Sbjct: 298 RMGEPLQSLQKMANNRHQMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGH DL+ + ++P++LV + G+ L A K+LA++ G+ V +N Sbjct: 358 RN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPDDVYITQN 415 Query: 419 GKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRK 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y K+ ++ + + + ++ D L++ + S+L Sbjct: 476 KKKIVSEPQVTSRGF-VYIKANHKLMNDSIQVIKDAIQANFEHKKFDWTELKQDMRSSLG 534 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V + ++++ R Sbjct: 535 KFLYKQTNRRPVVLPVVMEVNQNR 558 >gi|42518933|ref|NP_964863.1| hypothetical protein LJ1007 [Lactobacillus johnsonii NCC 533] gi|41583220|gb|AAS08829.1| hypothetical protein LJ_1007 [Lactobacillus johnsonii NCC 533] Length = 591 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 246/562 (43%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLQFFQ 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYADKIAGIFLTHGHADSIGALPYILRDHDIPVFGSKLTIELAKIAVQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKKGYRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K IY+I +N G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIYNIFENYDGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P +L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDNELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQMLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDAYALEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + V + + ++ D L++ + + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGAADVIKEAVNNNFEHKKFDWTELKQDVRNDVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|157828490|ref|YP_001494732.1| hypothetical protein A1G_03465 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933208|ref|YP_001649997.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] gi|157800971|gb|ABV76224.1| hypothetical protein A1G_03465 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908295|gb|ABY72591.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] Length = 560 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 205/552 (37%), Positives = 322/552 (58%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y +W+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----QGQWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW+ L P+Y++ F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYSTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 126 VKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKFYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G +K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KL KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGLLAAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNHIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|325684384|gb|EGD26553.1| metallo-beta-lactamase superfamily protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 613 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 142/564 (25%), Positives = 263/564 (46%), Gaps = 14/564 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + LGGV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + ++ IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 QYGDQVVGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++D S+ + HS+P+++ +VI +P G IV+TGD+K D A TD Sbjct: 118 VIDADTEIDFKNASVSFFQTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMT 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ Sbjct: 178 RLAEIAENGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNINRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG Sbjct: 238 QVFNAAAATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ + + + E D V ++ E + + + G VI Sbjct: 298 RMGEPLQSLQKMANNRHQMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGH DL+ + ++P++LV + G+ L A K+L ++ G+ V +N Sbjct: 358 RN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLTVETGMDPDDVYITQN 415 Query: 419 GKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRK 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y K+ ++ + + + ++ D L++ + S+L Sbjct: 476 KKKIVSEPQVTSRGF-VYIKANHKLMNDSIQVIKDAIQANFEHKKFDWTELKQDMRSSLG 534 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V + ++++ R Sbjct: 535 KFLYKQTNRRPVVLPVVMEVNQNR 558 >gi|157825734|ref|YP_001493454.1| hypothetical protein A1C_03300 [Rickettsia akari str. Hartford] gi|157799692|gb|ABV74946.1| hypothetical protein A1C_03300 [Rickettsia akari str. Hartford] Length = 560 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 206/553 (37%), Positives = 318/553 (57%), Gaps = 10/553 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----KGKWLMIDCGSGFADDYLPGVDMIIADSRFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LWS L P+Y + F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWSSLKCPIYTTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++G K+ + FS+E V + HS PE A++IR+ GNI+HTGDWK D+D +LG D++ Sbjct: 126 VKSGSKISLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPVLGQKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYFKDIAPLISERDVSRFSREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ +++LA KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHPSIRLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L +MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSIDELHKMYSLIRPNICIPVHGEPIHIHEHVKLAKKNGIKQAVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ +I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNATVISKVENGYLAVDGNYLLPVESPIFKARRRMCESGIVVASVVINKKGMLAAN 484 Query: 483 PEIVDIGIPAYDGDG---GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P + G+ D I + + V T+ + + + + E+I +R LK Sbjct: 485 PILSMPGLLDPKEDMALVNLIKNDIQELV--TIQNKQTKKALSDEQVIEAIKRTIRKTLK 542 Query: 540 KVWGKKPLVTVFI 552 + K P++ V + Sbjct: 543 QEINKSPVIIVNL 555 >gi|331703651|ref|YP_004400338.1| hypothetical protein MLC_6320 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802206|emb|CBW54360.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 610 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 275/552 (49%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++ + +K Sbjct: 61 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQK 116 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ + ++ K + A Sbjct: 117 KIKALFITHGHEDHIGGIQYLVQQVKIPVIYAPKLAAMLIRDRLKEYKIEDKTIVKEYDA 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 177 DDMWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + AKG + +TTF+S+V RI+ II+ Sbjct: 236 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQAKGRIFLTTFASNVHRIQHIIE 295 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 296 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 355 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DTV+FSS IPGN + + N+L G VI ++ Sbjct: 356 PMAALSRIANNKHLSINIIPGDTVVFSSSPIPGNRADVEKLVNKLTRVGAIVIENTSDNK 415 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 416 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHVETGESVNLEKGNGFIMANGDVL 475 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L +I V DG + A I +R LS G ++V + LD+ + Sbjct: 476 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNKLIS 535 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+L + +V Sbjct: 536 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSLSPYIFRV 594 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 595 KRRNPLIIPVIL 606 >gi|320335877|ref|YP_004172588.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757166|gb|ADV68923.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 553 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 178/554 (32%), Positives = 290/554 (52%), Gaps = 18/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG N+ Y YG + +++D G++FP GVDL+ P I ++ + Sbjct: 13 LEVIPLGGMGEIGKNILAYRYG----DEILLVDAGLAFPDSHQVGVDLIIPRIDYLQQHA 68 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 + ITH HEDH G+ + L +P+Y++ +GLL K + + Sbjct: 69 GLIKGWVITHGHEDHIGSFPYILPRLPRIPIYSAKLTLGLLREKLSEFGIKDSDVDLREI 128 Query: 124 QAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G++V VG F++++ R+ HSIP+ M V+ +PVG +VHTGD+KLD G +D Sbjct: 129 EPGERVQVGRAFTVDTFRITHSIPDNMGYVLHTPVGRVVHTGDFKLDAHPADGRTSDLSK 188 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + G +G L L+ DSTNA R GT SE + +NI I+K+A+G V +TTF+S+V RI++ Sbjct: 189 VAQAGQDGTLLLISDSTNAERPGTTASESDVARNIEAIVKDARGRVFITTFASNVHRIQN 248 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ +AE+ GR++ + G S+ + VA VG ++ ++ E Q + + TGSQ Sbjct: 249 IVTLAERNGRRVAMEGRSMLKYAQVAQAVGHLEFKDPLITAEEMADLQDSQALFVCTGSQ 308 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P S L++L+ G + L D+VI SS IPGNE A+ + NRL E GV V Sbjct: 309 GQPMSVLSRLAFGTHAKLALKRGDSVILSSNPIPGNEEAVNLVINRLYELGVDVYY-PPT 367 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH ++L + RP+ + HGEP H + H + A +NG Sbjct: 368 YKVHASGHASQDELATILNLARPKFFLPWHGEPRHQINHAKFAQSLPHPPRRTLIAKNGD 427 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +++L PD + V G DG +G D I +R +S G L + +L ++ Sbjct: 428 IVKLTPDDFRVTGTVPAGGVYVDGLGVGDINDDIILERMGMSQEGVLLLTAVLHPTPHV- 486 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 E+V G + D + + + + V + +R+ ++ +R+ + A+R ++K Sbjct: 487 ---EVVSRGFVKTNRD---LEAQIRRVALEAVETGLREKRR-MEDVRDDLYGAVRRFVRK 539 Query: 541 VWGKKPLVTVFINK 554 G+ P++ I + Sbjct: 540 TTGRNPVLIPTIVE 553 >gi|67459068|ref|YP_246692.1| hypothetical protein RF_0676 [Rickettsia felis URRWXCal2] gi|67004601|gb|AAY61527.1| Conserved hypothetical protein [Rickettsia felis URRWXCal2] Length = 560 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 204/552 (36%), Positives = 322/552 (58%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----KGKWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ +FS+E V + HS PE A++IR+ GNI+HTGDWK D+D +LG D++ Sbjct: 126 VKPGSKINLESFSLEMVPLTHSAPEMQAVMIRTDAGNILHTGDWKFDNDPVLGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYFKDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ +++KLA KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHQSIKLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEQVKLAKKNGIKQAVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGLLVAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|256847012|ref|ZP_05552458.1| metallo-beta-lactamase superfamily protein [Lactobacillus coleohominis 101-4-CHN] gi|256715676|gb|EEU30651.1| metallo-beta-lactamase superfamily protein [Lactobacillus coleohominis 101-4-CHN] Length = 595 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 158/566 (27%), Positives = 264/566 (46%), Gaps = 15/566 (2%) Query: 1 MKN---EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK ++ +P GGV E G NM + + ++DCG+ +P+++L G+D V PD Sbjct: 1 MKEFKLSKINVIPFGGVRENGKNMYAVEI----NEQIFILDCGLKYPENELMGIDFVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++++ + + +F+T H D GAL VPV+ S I L + + KK Sbjct: 57 WSYLLDHKDQIAGVFLTQGHADSIGALPYFLMDFRVPVFGSELTIELAKLAVKNNKQVKK 116 Query: 118 IP-CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 ++D + H+IP+T+ +V+ + GNIV+TGD+K D A Sbjct: 117 FNDFHVVDPDTEIDFDGVVVTFFSTTHTIPQTLGIVLHTDEGNIVYTGDFKFDQTARGDY 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 TD L IG+EG+L LM DS A G EK I + I D N G ++V + +S+ Sbjct: 177 RTDLSQLAKIGDEGVLLLMSDSAGAGITGASTKEKDIAEYIRDTFDNYTGRIVVGSVASN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + R++ I+D AE+ GRK+VL GS +++++ A+ +G IK D +S + +++ Sbjct: 237 IMRVQQILDAAEKTGRKVVLSGSDIEQIIDTAMKLGEIKVPDNTLISMDEATNLEPNEIV 296 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ TG GEP AL ++ G+ +V+L E D ++ E + + L G Sbjct: 297 ILVTGRMGEPLKALNDIANGDDPDVQLGENDLAFITTTPSYAMETMEQKVTDALYRAGAD 356 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CV 413 V + ++ SGH ND + M ++RP+ L+ I GE L H LA + GI V Sbjct: 357 VKFISQD--LNPSGHANQNDEQLMLNFMRPKYLMPIQGEYRLLDQHALLAEKVGIPRENV 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 V G +L L + D V G + DG IG ++ + RR LS G V + Sbjct: 415 FIVNKGDVLSLKDGEFYLGDHVEVGNTMIDGTGIGDIGNIVLRDRRILSEDGIFVVVATI 474 Query: 474 D-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 D + I P+I G + ++ K V + + + D L++++ Sbjct: 475 DRKNKKIVTRPQITSRGF-VFVKTNRELMKQSADLVEKVIQEDLDQKEFDWSHLKQNVRD 533 Query: 533 ALRSLLKKVWGKKPLVTVFINKISRQ 558 L L + P++ I +I++ Sbjct: 534 KLNRFLFNQTKRHPVILPVIMEINQH 559 >gi|34580471|ref|ZP_00141951.1| hypothetical protein [Rickettsia sibirica 246] gi|28261856|gb|EAA25360.1| unknown [Rickettsia sibirica 246] Length = 560 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 202/552 (36%), Positives = 321/552 (58%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y +W+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----QGQWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 RYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYITTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 126 VKPGSKINLEPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G + +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLNDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KL KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +++++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASIVINKKGLLAAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|254852061|ref|ZP_05241409.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|258605357|gb|EEW17965.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] Length = 515 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 139/518 (26%), Positives = 250/518 (48%), Gaps = 7/518 (1%) Query: 42 SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 FP+++L G+D+V PD ++ + + + A+F+TH HED GAL L + PVY + Sbjct: 1 MFPENELLGIDIVIPDFKYLEENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELT 60 Query: 102 IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 I L ++ R + + + R H+IP+++ +V+ + G+IV Sbjct: 61 IALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIV 120 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+K D A G +D + G +G+LAL+ DS+ A GT S+ I++ I Sbjct: 121 YTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAF 180 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLF 280 + A G ++V +S++ R++ ++D + RK+ ++G L+RV +A +G I ++ L Sbjct: 181 RMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLI 240 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV 340 + + Y +++ +I TG+ GEP +L +++G + DTV ++ P E Sbjct: 241 VPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLET 300 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 + + L + G +V+ + +SGH DLK M ++P+ V +HGE L++ Sbjct: 301 MMAKTMDMLYKAGAKVLT--MSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLIS 358 Query: 401 HKELALQEGIAC--VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKR 458 H +LA + G+A V V G++L D + + V G L DG +G ++ + R Sbjct: 359 HAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDR 418 Query: 459 RQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQ 517 + LS G V V L+ I PEI+ G Y + + + K V V Q Sbjct: 419 KLLSEDGIFIVVVTLNRKSKTITSGPEIISRGF-IYVRESEHLIEESSKVVTKIVEKNLQ 477 Query: 518 FRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + L++ I L L + ++P++ I ++ Sbjct: 478 ETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV 515 >gi|256383733|gb|ACU78303.1| RNA-metabolising metallo-beta-lactamase family [Mycoplasma mycoides subsp. capri str. GM12] gi|256384564|gb|ACU79133.1| RNA-metabolising metallo-beta-lactamase family [Mycoplasma mycoides subsp. capri str. GM12] gi|296455464|gb|ADH21699.1| RNA-metabolising metallo-beta-lactamase family [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 610 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 275/552 (49%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++ + +K Sbjct: 61 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQK 116 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ + ++ K + A Sbjct: 117 KIKALFITHGHEDHIGGIQYLVQQVKIPVIYAPKLAAMLIRDRLKEYKIEDKTIVKEYDA 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 177 DDVWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + AKG + +TTF+S+V RI+ II+ Sbjct: 236 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQAKGRIFLTTFASNVHRIQHIIE 295 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 296 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 355 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DTV+FSS IPGN + + N+L G VI ++ Sbjct: 356 PMAALSRIANNKHLSINIIPGDTVVFSSSPIPGNRADVEKLVNKLTRVGAIVIENTSDNK 415 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 416 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHVETGESVNLEKGNGFIMANGDVL 475 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L +I V DG + A I +R LS G ++V + LD+ + Sbjct: 476 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNKLIS 535 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+L + +V Sbjct: 536 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSLSPYIFRV 594 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 595 KRRNPLIIPVIL 606 >gi|309807237|ref|ZP_07701209.1| ribonuclease J 1 [Lactobacillus iners LactinV 03V1-b] gi|309807905|ref|ZP_07701835.1| ribonuclease J 1 [Lactobacillus iners LactinV 01V1-a] gi|308166375|gb|EFO68582.1| ribonuclease J 1 [Lactobacillus iners LactinV 03V1-b] gi|308168854|gb|EFO70942.1| ribonuclease J 1 [Lactobacillus iners LactinV 01V1-a] Length = 537 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 148/536 (27%), Positives = 265/536 (49%), Gaps = 9/536 (1%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I++DCG+ FP+D G++ + D ++++K R+ + A+ +TH HEDH G + Sbjct: 2 YCVQYQDEIIIMDCGIKFPEDGEMGINYIISDYSYLIKNREKIKALVVTHGHEDHIGGIP 61 Query: 86 DLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +PVYA+PFA+ L+ K + K + S+ R HS Sbjct: 62 FLLKKIPEIPVYATPFALALIRGKLDEHGILKNSVLHEEYEDTVLQFSKLSVTFFRTTHS 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGNEGILALMCDSTNAMR 203 IP+T+ + + +P G ++ TGD+K D ++ D + +G EG+LAL+ DSTNA Sbjct: 122 IPDTLGIAVHTPQGTVIFTGDFKFDLTPVMDQPAPDFQKMAKLGEEGVLALLSDSTNAEV 181 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 SE+ + K++++I+ KG ++ TF+S++ R+ + I A GRK+ + G S++ Sbjct: 182 ATFTKSERFVAKSLHNIITGIKGRIIFATFASNLYRVSTAIKAAVATGRKVAIFGRSMEN 241 Query: 264 VVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 + ID+G + + + P E+ +++ TGSQGEP +AL++++ G R + + Sbjct: 242 GIQNGIDLGYLDIPEGTIVEASEINKLPPEKAMILCTGSQGEPLAALSRIADGSHRQISI 301 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 DTVIFSS IPGN ++ H+ N+L E G V+ VH SGH + K M + Sbjct: 302 KPGDTVIFSSNPIPGNTTSVNHLINKLYEAGADVVHGKIH-NVHTSGHGGQEEQKMMIEL 360 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLF 440 +P+ + +HGE V H E A G+ + NG +L L I ++ Sbjct: 361 TKPEYFIPVHGEYRMQVIHTETAQATGMAKDHTFVLENGDVLALTKTSSRIAGKIQIPDV 420 Query: 441 LKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGK 499 D + D+ + R+ L+ G + V +D H + P+I+ G Y + Sbjct: 421 FVDTSSTSEVGDIVVHDRKILAEEGLVVVVATIDYQHQRVLAGPDILSRGF-VYMRESTD 479 Query: 500 IHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + K + + ++ + + D + L+++I L+ L ++P++ I + Sbjct: 480 LITAAQKHIYHLLRVEMAKETKSDERELKKNIIETLQDFLYSRTERRPMILPMIIE 535 >gi|32266672|ref|NP_860704.1| hypothetical protein HH1173 [Helicobacter hepaticus ATCC 51449] gi|32262723|gb|AAP77770.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 715 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 161/551 (29%), Positives = 289/551 (52%), Gaps = 12/551 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLGG+GEIG N+ + + I+ID G+SFP +D+ GVD++ PD +++ + Sbjct: 170 VRITPLGGLGEIGGNITIIE----TPDSAIVIDVGMSFPNEDMHGVDILVPDFSYLFAIK 225 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPCISFQ 124 + + ITHAHEDH GA+ L+ L P+Y +P +G++ +K + K + Sbjct: 226 DKIAGVVITHAHEDHIGAVPYLFKLLQFPIYGTPLPLGMIGSKFDEHGLKKYRSFFKIVE 285 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +GAF +E + + HS+ + AL IR+ G I+HTGD+K+D I TD L Sbjct: 286 KRKPIKIGAFEVEWINITHSVIDASALAIRTDAGVIIHTGDFKIDHTPIDNLPTDLHRLA 345 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG++ L+ DSTN+ R GT SE + + K A+G V+++TFSS++ R+ I Sbjct: 346 HYGEEGVMLLLSDSTNSHRSGTTPSEASVGPTFEALFKQAQGRVIMSTFSSNIHRVYQAI 405 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 + RK+ ++G S+++ + +A ++G I +F+ YP E+++++ TGSQG Sbjct: 406 HYGLKYNRKVAVIGRSMEKNLEIARELGYIDLPQNIFIEAHEVEKYPDEEVLIVTTGSQG 465 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SAL +++ E R++K+ D +I S++AIPGNE ++ + N L++ G + +D Sbjct: 466 ETMSALYRMATDEHRHIKIKPSDMIIISAKAIPGNEGSVSAVLNYLMKAGANIAYQDF-S 524 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + +G Sbjct: 525 EIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIAKHKQTAIACGVLEKNIYLMEDGDQ 584 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + + P+ ++ + V +G D + + + + R+ L+ G + ++ + I Sbjct: 585 IEVNPNYLKKVRSVKNGKTFIDNQINRQIENDVVLDRQALAHDGIVIISARISKERKILE 644 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 +I G+ A D G K + +T+ V + + K L + + + + K Sbjct: 645 T-KISSYGLVADKEDKG-FEKEMNETLEFLVKNFKTEG-FNAKNLENEVHNVFKRHIFKK 701 Query: 542 WGKKPLVTVFI 552 K P + I Sbjct: 702 VKKYPTIVPMI 712 >gi|239947268|ref|ZP_04699021.1| metal-dependent hydrolase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921544|gb|EER21568.1| metal-dependent hydrolase [Rickettsia endosymbiont of Ixodes scapularis] Length = 560 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 204/552 (36%), Positives = 318/552 (57%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----KGKWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D +LG D++ Sbjct: 126 VKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPVLGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE +K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LESYGDEGVLALVCDSTNVFNKGSSGSEGDARKSLVDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G K +S+ + RE+L+VIATG Q Sbjct: 246 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYFKDIAPLISERDVSRFRREELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KLA KDT+IFSS+ IPGNE I + N V+ V VI E + Sbjct: 306 GEPMAATAKLASNSHPSIKLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKASVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQAVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR + G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRHMRESGIVVASVVINKKGLLAAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 485 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|163790852|ref|ZP_02185277.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] gi|159873920|gb|EDP67999.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] Length = 559 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 140/556 (25%), Positives = 260/556 (46%), Gaps = 13/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + +PLGGV E G NM ++DCG+ +P+ +L G+D+V PD +++ + Sbjct: 3 TIKIIPLGGVRENGKNMYAVE----VDEDIFVLDCGLMYPETELLGIDVVIPDFSYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 R + +F+TH HED GAL VPV+ + I L + + + Sbjct: 59 RNRVTGVFLTHGHEDAIGALPYFLQKFDVPVFGTELTIALAKLFVEKDSQTSTFDDYHII 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++ G R H+IP+++ + +++ G+IV+TGD+K D A ++ + Sbjct: 119 DENTEIEFGDVIASFFRTTHTIPDSVGIALKTTEGSIVYTGDFKFDQSAKPMYQSNLSRI 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +LAL+ DS+ A IS+ + + + D +NA G ++V + +S++ RI+ + Sbjct: 179 ADIGKSKVLALLSDSSEAESPVENISDLKVAEEVLDTFQNATGRIIVASVASNILRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIATGS 301 +D A + +KI + GS+L+ +V +AI++ + + L + Y ++++V+ TG+ Sbjct: 239 LDAAHKSHKKIFITGSNLEEIVQIAIELNKLQLPNEDLIVPITDIEKYTDQEIVVLETGA 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP L+++++G+ V + E D V + EV + +N + G V Sbjct: 299 TGEPIKTLSRMAKGKHTQVNIKEGDLVYIVTSPSTAMEVTVAQTENMIYRAGGTVKQISD 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + SGH PNDLK M I+P + + GE L AH ELA + + G Sbjct: 359 N--LKASGHATPNDLKLMINLIKPTYFIPVQGEYRKLSAHAELAHEVGMSYKNIFIPGKG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-N 478 ++ D + + +V G + DG IG ++ + R+ LS G V ++ Sbjct: 417 DIMEYKNDRMHVAGQVTVGNTMVDGIGIGDIGNIVLRDRKLLSEDGIFVAVVTINRRKSK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I PE++ G Y + + + + V + + + L++ I AL L Sbjct: 477 IISGPEVMTRGF-VYVKENTDLINQSNEIIREVVEENLNRKEFEWSRLKQEIRDALNKHL 535 Query: 539 KKVWGKKPLVTVFINK 554 + ++P++ I + Sbjct: 536 YEQTRRRPVILPIIME 551 >gi|326403098|ref|YP_004283179.1| ribonuclease J 1 [Acidiphilium multivorum AIU301] gi|325049959|dbj|BAJ80297.1| ribonuclease J 1 [Acidiphilium multivorum AIU301] Length = 548 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 203/550 (36%), Positives = 322/550 (58%), Gaps = 9/550 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F PLGG GEIGMN+ +YG +++DCG+ F + P +L+ PD F+ R Sbjct: 8 LSFTPLGGTGEIGMNLNVYG----LDGDLLVVDCGMGFAGPEAPEAELLVPDPAFLAANR 63 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITHAHEDH G + +W L PVYA+PFA L+ + + + + Q Sbjct: 64 DRIAGLVITHAHEDHIGGIARIWDALRCPVYATPFAAALIRYRLGEAGLLRSVRITEIQP 123 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +VG F++ +R++HS PE+ ALV+ + G ++HTGDWKLD + ++G TD+ +L A Sbjct: 124 GAAFEVGPFALRYIRMSHSTPESQALVLTTKYGTVLHTGDWKLDPEPLIGPPTDEAALEA 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G+ G+LA++CDSTNA+ EG SE +++++ ++ +G ++VT F+S+++RI +++ Sbjct: 184 LGDAGVLAMICDSTNALVEGHSGSEATVRRSLTSLIAGLRGRIVVTCFASNIARIDTVVK 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GR + L+G SL + V A + G + F+ ++ G P + L+++ATGSQGE Sbjct: 244 AAAAAGRHVALVGRSLGKYVEAAQEAGYLADLPDFVPEDEVGAIPDDSLLILATGSQGEK 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 RSALA+++ RNV L E DTVIFS+R IPGNE AIG +++ LV GV V+ + + V Sbjct: 304 RSALARIAADTHRNVALGEGDTVIFSARVIPGNERAIGAVQDELVRAGVNVMTD-DDHMV 362 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 HVSGHP ++L+R+Y+ +RP+ LV HGE H+ A +LA GI + +G +LRL Sbjct: 363 HVSGHPARDELRRLYRLVRPKYLVPTHGEWRHMAAQADLAEAAGI-STFLLEDGDVLRLA 421 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 P+P +++D V G DG + +A RR++ G + ++ +D + G +I Sbjct: 422 PEPPQVVDSVPVGRLAVDGDRLVPMQGGVMAARRRMMLNGVVVASIAVDRAGKVKGGAQI 481 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 G+ D L + + T DLP R D ++E+ +ALR L + +GK+ Sbjct: 482 AAPGLFEAD---DHALGALAEDFVATFEDLPANLRTDRNAVKEAAQAALRRALGRRFGKR 538 Query: 546 PLVTVFINKI 555 P+V V + I Sbjct: 539 PMVEVHVLHI 548 >gi|157964525|ref|YP_001499349.1| metallo-beta-lactamase family hydrolase [Rickettsia massiliae MTU5] gi|157844301|gb|ABV84802.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Rickettsia massiliae MTU5] Length = 561 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 205/552 (37%), Positives = 320/552 (57%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D +FI Sbjct: 11 KNDLLFVPLGGSNEIGMNLNLYHY----QGKWLMIDCGSGFADDYLPGVDMIIADSSFIE 66 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 67 KYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKFRLNEYDFAKNIKIHE 126 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ F +E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 127 VKPGSKINLDPFFLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKKADEEF 186 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 187 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCLQMVVVSTFASNLARLDT 246 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A GRK+VL G SL R++ A + G +K +S+ + RE+L+VIATG Q Sbjct: 247 IIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVIATGCQ 306 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ ++KL KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 307 GEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVITER-D 365 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 366 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQAIEVENGSVV 425 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V++D + Sbjct: 426 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVIDKKGLLAAN 485 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + + E+I +R LK+ Sbjct: 486 PMLSMPGLLDPKEDMA-LVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKTLKQ 544 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 545 EINKSPVIIVNL 556 >gi|218283088|ref|ZP_03489183.1| hypothetical protein EUBIFOR_01769 [Eubacterium biforme DSM 3989] gi|218216157|gb|EEC89695.1| hypothetical protein EUBIFOR_01769 [Eubacterium biforme DSM 3989] Length = 601 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 172/558 (30%), Positives = 272/558 (48%), Gaps = 13/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + + LGG+GE+G NM Y + + ++DCGV FP DDL GVD V PD + Sbjct: 25 EKGDTLIYALGGLGEVGKNMYCYEH----ENEICIVDCGVLFPGDDLLGVDYVIPDYHHL 80 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 ++ K + ITH HEDH G + L + + +YA FA L+ K + +K Sbjct: 81 IRMNKKRKFLVITHGHEDHIGGIPFLLKQVQIDAIYAPRFAKALILKKLSEHKGLEKTKI 140 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + F + HSIP+++ + I P G+IVHTGD+K D + D Sbjct: 141 IEIDENSSITTKYFKVGFFNTIHSIPDSLGVHITCPNGSIVHTGDFKFDLTPVGT-NADY 199 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG LM DSTN+ E ISE+ + I DIM+ K ++V TF+S+V R+ Sbjct: 200 QKMAFIGVTQPDLLMSDSTNSGVEDFSISERKVANEIQDIMRKTKQRLIVATFASNVHRV 259 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II+ A + GRK+++ G S++ VV + +G IK K+ FLS E P +++ +I T Sbjct: 260 AQIIEAATKFGRKVIVFGRSMENVVDIGRKMGTIKVKNSDFLSPEELAHTPDDKVCIICT 319 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R + L DT++FSS IPGN+ ++ + + L G V+ + Sbjct: 320 GSQGEPLAALSRIANGTHRFIHLKPGDTIVFSSNPIPGNQSSVNRVIDNLFRSGATVLTK 379 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H +GH + K M Q +RP + IHGE L+ H++ A++ GI + Sbjct: 380 SILNNLHTTGHASKEEQKLMLQLVRPTYFMPIHGEYKMLMQHRQTAMETGIPKENIFVCA 439 Query: 418 NGKMLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG +L L + D DG I + + RR L+ G ++V + +D Sbjct: 440 NGDILILRDHKVLQSDWRYQGDDIYVDGNDISGLSTAVLKDRRILADNGLVAVILAIDSK 499 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P IV G + D + K V ++ + + + ++ + S L Sbjct: 500 ENKILMRPVIVSRGF-VFIKDSQGLIKEAEYIVNNSLQEKMKEKTT-FSEIKNCVRSTLE 557 Query: 536 SLLKKVWGKKPLVTVFIN 553 L K + P+V I Sbjct: 558 PFLYKKTHRNPIVIPVIL 575 >gi|86607549|ref|YP_476311.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556091|gb|ABD01048.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 611 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 278/563 (49%), Gaps = 17/563 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +PLGG EIG N + Y I++D G++FP + + GV++V PD+T+I Sbjct: 17 STSSVQMIPLGGEREIGKNTWAFRY----EDDIILLDAGLAFPDESMHGVNIVLPDMTYI 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + R + + +TH HEDH G + +P +Y A+ LLE K + + Sbjct: 73 KQNRDKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEKLREVGLLNRTEL 132 Query: 121 ISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V + F E +R HS ++ + + +PVG I+ TGD+K+D + G+ D Sbjct: 133 RPVGPREIVPLSKHFFAEFIRNTHSFADSFTVALHTPVGVIIQTGDFKIDHTPVDGEYFD 192 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L G +G+L L+ DSTNA G SE + + + AKG V++TTF+SSV R Sbjct: 193 LQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGRVIITTFASSVHR 252 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIA 298 + ++ IAEQ GR + LLG S+ VV+ A +G I+ L P +++I++ Sbjct: 253 LNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDRVIILT 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL +++ GE +++ DTV++S+ IPGN +A+ + ++L+E G VI Sbjct: 313 TGSQGEPLAALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVIDKLMELGANVIY 372 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH D K M RP+ V HGE LV H E A+ GI + + Sbjct: 373 GK-DKGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETAMSMGIPRENIVII 431 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG ++ + + I I V GL + G D + +R+Q++ G ++V + LD Sbjct: 432 DNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDGMVTVVISLDGS 491 Query: 477 YNIFGVPEIVDIGIPAYDGD--GGKIHKLLLKTVITTVVDLPQFRRK-----DLKLLRES 529 + P++ G+ G + LL T+ + + D L+ Sbjct: 492 GQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGSLDIDWAGLKGE 551 Query: 530 ISSALRSLLKKVWGKKPLVTVFI 552 + +R L++ +P V VF+ Sbjct: 552 VERVVRRFLREQLPGRPTVAVFV 574 >gi|108758638|ref|YP_629736.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108462518|gb|ABF87703.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 546 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 289/555 (52%), Gaps = 15/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+N + + ++ID G+ FP +PGVD++ PD + + + Sbjct: 2 LHVIPLGGLGEIGLNSMVI----ACRGEMLLIDAGLMFPSAGMPGVDIIIPDFSHLKQNA 57 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L + +TH HEDH GAL L + + VPVY + F + + + + + I Sbjct: 58 AQLKGVLLTHGHEDHLGALPYLLNEVPVPVYGTRFTLAMARHRLEELGIEADLREIE--P 115 Query: 126 GDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + VG F +E+ RV H++P+ + ++R+P G ++HTGD+KLD D I G TD + Sbjct: 116 REPFPVGTAFRVEASRVTHTVPDAVGYILRTPEGTLIHTGDFKLDPDPIDGLRTDLERWG 175 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G EG+L L+ DSTN+ SE+ +++ + + A G ++V FSS++ R+R ++ Sbjct: 176 EAGEEGVLCLLSDSTNSEVTEETGSERVVEQTFERLFQGATGRIIVALFSSNLHRVRHLL 235 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 +AE++GRK+ L G S+ R V +A ++G + D LF+ +S P ++++V+ TG+QG Sbjct: 236 ALAERLGRKVALQGRSMLRNVEMAREMGYLDVPDSLFVHLDSVPALPAQRVLVLTTGAQG 295 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EPR+ L+QL+ G+ V+L D V+ SSRAIPGNE ++G + + L +G +V E Sbjct: 296 EPRAGLSQLASGDGP-VRLNPGDLVVLSSRAIPGNERSVGALIDALQWRGAKVAYAQVEP 354 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 +HVSGH +R+ +RP + +HGE HL H A + G+ ++G + Sbjct: 355 GIHVSGHASQPQQRRVLDLVRPAHFIPVHGEGRHLHKHLLTAREAGLEPAQCLLAQDGDV 414 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + V G LKD F G + +R +LS G ++ V+L + Sbjct: 415 VTFEEGRGRFTGSVPSGRILKDRFGPGLVTPDTLQERVRLSETGMVAAVVVLQRGSQQLV 474 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ G+ D + + + +L R D L+RE ++ A+R K Sbjct: 475 AGPQLSGQGLSV---DEQVLLPRVAQDARVLFEELSPILRGDDALVREELTRAVRRAFKA 531 Query: 541 VWGKKPLVTVFINKI 555 K+ LV + ++ Sbjct: 532 HTSKRALVVPLVVRV 546 >gi|308183523|ref|YP_003927650.1| hypothetical protein HPPC_06960 [Helicobacter pylori PeCan4] gi|308065708|gb|ADO07600.1| hypothetical protein HPPC_06960 [Helicobacter pylori PeCan4] Length = 691 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEVLLKSSNAETLNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 673 ALFKKFRKYPAIICHVH 689 >gi|42561197|ref|NP_975648.1| hypothetical protein MSC_0670 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492695|emb|CAE77290.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 610 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 167/552 (30%), Positives = 274/552 (49%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++ + +K Sbjct: 61 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQK 116 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ K ++ K + A Sbjct: 117 KIKALFITHGHEDHIGGIQYLVQQVKIPVIYAPKLAAMLIRDKLKEYKIEDKTIVKEYDA 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 177 DDVWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + AKG + +TTF+S+V RI+ II+ Sbjct: 236 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQAKGRIFLTTFASNVHRIQHIIE 295 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 296 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 355 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DT++FSS IPGN + + N+L G VI ++ Sbjct: 356 PMAALSRIANNKHLSINIIPGDTIVFSSSPIPGNRADVEKLVNKLTRVGAIVIENTSDNK 415 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 416 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHVETGESVNLEKGNGFIMANGDVL 475 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L +I V DG + A I +R LS G ++V + LD+ + Sbjct: 476 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNKLIS 535 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+ + +V Sbjct: 536 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSSSPYIFRV 594 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 595 KRRNPLIIPVIL 606 >gi|313665501|ref|YP_004047372.1| hypothetical protein MSB_A0633 [Mycoplasma leachii PG50] gi|312949798|gb|ADR24394.1| conserved hypothetical protein [Mycoplasma leachii PG50] Length = 610 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 168/552 (30%), Positives = 277/552 (50%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++++ +K Sbjct: 61 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLVENQK 116 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ + ++ K + A Sbjct: 117 KIKALFITHGHEDHIGGIQYLVQQVKIPIIYAPKLAAMLIRDRLKEYKIEDKTIVKEYDA 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 177 DDVWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + KG + +TTF+S+V RI+ II+ Sbjct: 236 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQVKGRIFLTTFASNVHRIQHIIE 295 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 296 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 355 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DTV+FSS IPGN + + N+L G +VI ++ Sbjct: 356 PMAALSRIANNKHLSINIIPGDTVVFSSSPIPGNRADVEKLVNKLTRVGAKVIENTSDNK 415 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 416 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHIETGESVNLEKGNGFIMANGDVL 475 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 L +I V DG + A I +R LS G ++V + LD+ N + Sbjct: 476 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNRLIA 535 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+L + +V Sbjct: 536 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSLSPYIFRV 594 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 595 KKRNPLIIPVIL 606 >gi|323341736|ref|ZP_08081969.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464161|gb|EFY09354.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 621 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 269/563 (47%), Gaps = 18/563 (3%) Query: 2 KNEELV-----FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 KN +L LGG+GE+G NM + CGV FP+++L GVD V Sbjct: 4 KNMKLRKTDTLVYALGGLGEVGKNMYCIEHDDEIIIID----CGVMFPEENLLGVDYVIQ 59 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVS 115 D +++ +K + A+ ITH HEDH G + L ++VP +YA FA +E K ++ Sbjct: 60 DYAHLIRNQKKVKALVITHGHEDHIGGIPFLLQKVNVPQIYAPQFAKAQIERKLEERKIR 119 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 K + + F I V HSIP+ + +++ +P G IV TGD+K D + Sbjct: 120 TKHKIQEIDSKSTIKTKHFVIGFFNVVHSIPDALGVLVNTPNGRIVSTGDFKFDLTPVGN 179 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D + +G G+ LM DSTNA G ISEK + + I I +G +++ TF+S Sbjct: 180 -NPDYQIMSYMGEIGVTLLMSDSTNAEVSGFSISEKEVGREIKRIFNKTEGRIIIATFAS 238 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQL 294 +V R++ II+ A GRKI + G S+ VV++A +G I D+ F++ P +Q Sbjct: 239 NVYRVQQIIEAAIADGRKIAIFGRSMDNVVNIARKLGHIDAADKHFVNAHQLNKLPADQS 298 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +I TGSQGEP +AL++++ G R + + DTV+FSS IPGN ++ H+ N+L G Sbjct: 299 CIICTGSQGEPLAALSRIANGTHRQISIMPGDTVVFSSSPIPGNATSVSHVVNQLTRAGA 358 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--AC 412 V+ +H +GH + M Q I+P+ + +HGE L AH++ A++ G+ Sbjct: 359 NVLTNSPLNSIHTTGHASKEEQTLMLQLIKPKFFMPMHGEYKMLKAHRQTAIETGVDPDN 418 Query: 413 VPPVRNGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV 471 + NG ++ L + D + DG + + R+ LS G +SV V Sbjct: 419 IFICSNGDVVALRDGVAFMSDTRIQADDIYVDGNDSSGLSTAVLKDRKILSDSGLVSVVV 478 Query: 472 LLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESI 530 +D I P IV G + + + K V + + ++ +I Sbjct: 479 TIDSRQNKILCKPTIVTRGF-VFIKENQTLLKEAELVVYEALKKRMTKKVT-FGEIKNTI 536 Query: 531 SSALRSLLKKVWGKKPLVTVFIN 553 +L L K + PLV I Sbjct: 537 RGSLEPFLYKHTQRNPLVIPVIL 559 >gi|301321262|gb|ADK69905.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 610 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 167/552 (30%), Positives = 274/552 (49%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ E+G N Y + IMID GV FP+ + GV V PD +++ + +K Sbjct: 61 KIFALGGLEEVGKNTYCIEY----DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQK 116 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ K ++ K + A Sbjct: 117 KIKALFITHGHEDHIGGIQYLVQQVKIPVIYAPKLAAMLIRDKLKEYKIEDKTIVKEYDA 176 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D F + +NHSIP+ +++++P GNI TGD+K D + + L + Sbjct: 177 DDVWKTKNFKVSYAALNHSIPDAFGILVQTPNGNIFSTGDYKFDWSPLGHF-AELTKLAS 235 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G G+ LM DSTN+ EG EK I NI + AKG + +TTF+S+V RI+ II+ Sbjct: 236 MGENGVELLMADSTNSEVEGYTQGEKSIISNIDKLFLQAKGRIFLTTFASNVHRIQHIIE 295 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGE 304 A + RKIV+LG S +R++ + +G +K ++ F+ Y E+L+++ TGSQGE Sbjct: 296 TAHKYNRKIVILGRSFERIIKIIRQIGHLKISEKEFIKSTDIDKYKPEELMILTTGSQGE 355 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P +AL++++ + ++ + DT++FSS IPGN + + N+L G VI ++ Sbjct: 356 PMAALSRIANNKHLSINIIPGDTIVFSSSPIPGNRADVEKLVNKLTRVGAIVIENTSDNK 415 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH + K ++ IRP+ + +HGE L H E + + NG +L Sbjct: 416 IHTSGHASQEEQKLLFSLIRPKYFMPMHGEYRMLKKHVETGESVNLEKGNGFIMANGDVL 475 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L +I V DG + A I +R LS G ++V + LD+ + Sbjct: 476 ELLQGKAKIGKRVEADAVYVDGKDMTGKASNVIREREILSKDGLIAVVISLDSQTNKLIS 535 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P I+ G Y D G I ++ + V ++ + ++++I S+ + +V Sbjct: 536 QPRIISRG-SFYVKDAGSIISDSIQIITNAVNEVLMSSKPTFAAIKKAIKSSSSPYIFRV 594 Query: 542 WGKKPLVTVFIN 553 + PL+ I Sbjct: 595 KRRNPLIIPVIL 606 >gi|317013194|gb|ADU83802.1| hypothetical protein HPLT_07075 [Helicobacter pylori Lithuania75] Length = 689 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 137 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 192 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 193 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 252 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 253 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 312 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 313 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 372 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 373 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 432 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 433 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 492 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 493 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 551 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 552 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 611 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 612 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEVLLKSSNAETLNNPKKLEDHTRNFIRK 670 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 671 ALFKKFRKYPAIICHVH 687 >gi|227889791|ref|ZP_04007596.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus johnsonii ATCC 33200] gi|227849655|gb|EEJ59741.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus johnsonii ATCC 33200] Length = 591 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 245/562 (43%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ + LGG E G NM + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SQKIKIMILGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLQFFQ 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + R K Sbjct: 58 DYADKIAGIFLTHGHADSIGALPYILRNHDIPVFGSKLTIELAKIAVQRENRRRKNDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +++ ++ + HSIP+++ + I + G IV+TGD+K D A G TD Sbjct: 118 VIDADTEIEFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKKGYRTDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTNA + I+K IY+I +N G ++ +S++ R++ Sbjct: 178 RLSEIAQKGVLALLSDSTNAEANFPNDRQTSIEKYIYNIFENYDGRIIAAAKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A GR + L G ++V A+ +G + L + + P +L+++ TG Sbjct: 238 EIFQAAAATGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDNELVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ + D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGIVKELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK+LA++ + N Sbjct: 358 RDK--HTSGHATGRDLQMLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L D V + DG +G ++ + R LS G +D Sbjct: 416 GDAYSLEKGRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAATIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + V + + ++ D L++ I + + Sbjct: 476 KIISEPRVSTRGF-VYIKANHALMNGAADVIKEAVNNNFEHKKFDWTELKQDIRNDVEKY 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKQTGRRPVVLPVVMEVNQNR 556 >gi|158336580|ref|YP_001517754.1| metallo-beta-lactamase family protein [Acaryochloris marina MBIC11017] gi|158306821|gb|ABW28438.1| conserved hypothetical protein, possible metallo-beta-lactamase family protein [Acaryochloris marina MBIC11017] Length = 582 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 170/552 (30%), Positives = 290/552 (52%), Gaps = 19/552 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L +PLGG+ EIG N ++ + + I++D G++FP D + GV++V PD+T++ Sbjct: 7 KQALKIIPLGGLHEIGKNTCVFEF----EDEIILVDAGLAFPTDGMHGVNIVLPDMTYLR 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + R + + +TH HEDH G + + +P ++ A+ LL+ K V+ K Sbjct: 63 ENRHKIKGMIVTHGHEDHIGGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTELK 122 Query: 122 SFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + D V +G F +E +R HS+ ++ + I +P+G ++ TGD+K+D + G+ D Sbjct: 123 TVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIGVVIFTGDFKIDHTPVDGENFDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L L+ DSTN+ G SE+ + N+ + AKG +LVTTF+SSV RI Sbjct: 183 QKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVHRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I+DIA++ GR + ++G S+ V++ A ++G IK D LF ++ P +++++ T Sbjct: 243 NMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILILTT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL++++R E R +++ + DTV+FS+ IPGN +A+ + ++L+ QG VI Sbjct: 303 GSQGESMAALSRIARKEHRQIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVIYG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +HVSGH D K M RP+ + +HGE L+ H + A GI + + Sbjct: 363 RHHG-IHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRMLIKHAQTAQSMGIPEENMVIIN 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG M+ L PD I+I +V G+ L D I K + +R++L+ G ++V + Sbjct: 422 NGDMVALTPDSIQIDGKVPSGIELMDRAGILKAH--VLEERQRLAEDGLVTVAATIGLDG 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD------LPQFRRKDLKLLRESIS 531 + PE+ G+ K + V + + D L+ I Sbjct: 480 QLLTAPEVHLRGVVTTIT-SDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIE 538 Query: 532 SALRSLLKKVWG 543 L+ LL++ Sbjct: 539 RELQGLLRRELQ 550 >gi|91206067|ref|YP_538422.1| putative hydrolase [Rickettsia bellii RML369-C] gi|157826576|ref|YP_001495640.1| putative hydrolase [Rickettsia bellii OSU 85-389] gi|91069611|gb|ABE05333.1| Putative hydrolase [Rickettsia bellii RML369-C] gi|157801880|gb|ABV78603.1| Putative hydrolase [Rickettsia bellii OSU 85-389] Length = 560 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 205/552 (37%), Positives = 317/552 (57%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN LY Y KW++IDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFIPLGGSNEIGMNFNLYHY----KGKWLIIDCGSGFADDYLPGVDMMIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+++ + ITHAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KHKKDIVGMIITHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLSEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+D+ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D +LG D++ Sbjct: 126 VKPGGKIDLSPFSLEMVPLTHSAPEMQAIMIRTEAGNILHTGDWKFDNDPVLGKKADEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGISGSEGDVRKSLIDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II A+ GRK+ L G SL R+ A + G K +S+ + RE+L++IATG Q Sbjct: 246 IIHAAQLAGRKVALTGRSLHRIKLAAEESGYFKDIAPLISERDVSRFRREELLIIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP +A A+L+ +++KLA KDT+IFSS+ IPGNE I + N V+ GV VI E + Sbjct: 306 GEPLAATAKLASNSHQSIKLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKSGVEVITER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSVDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQAVEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V G DG + RR++ G + ++++D + Sbjct: 425 LLEPNNAKVIAKVESGYLAVDGNYLLPVESPIFKARRRMRESGIVIASIVIDQKGLLAAK 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK--DLKLLRESISSALRSLLKK 540 P + G+ + D + ++ + + +K + + E I S +R LK+ Sbjct: 485 PILSMPGLLDANEDMQ-LINIIKNDIAELIKTQQSQAKKALSKEQIEEKIKSTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P + V I Sbjct: 544 EINKSPAIIVNI 555 >gi|221633768|ref|YP_002522994.1| metallo-beta-lactamase family protein [Thermomicrobium roseum DSM 5159] gi|221156032|gb|ACM05159.1| metallo-beta-lactamase family protein [Thermomicrobium roseum DSM 5159] Length = 553 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 173/564 (30%), Positives = 279/564 (49%), Gaps = 20/564 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +PLGGVGEIG +M +Y Y I+ID G FP++DL GVDL+ PD+ + Sbjct: 1 MAKPRLRIIPLGGVGEIGKSMTVYEY----RNDLIVIDAGAKFPEEDLRGVDLIIPDVGY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH----VPVYASPFAIGLLEAKRVYERVSK 116 I + L AI +TH HEDH G + + + VP+Y S AI AK K Sbjct: 57 IKQRLNKLRAILLTHGHEDHIGGISFILNEFKSIAPVPIYGSELAIAYARAKLEDYSDPK 116 Query: 117 KIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + +G F +E + V HSIP + A+ +++P+G +VHTGD+K D LG Sbjct: 117 LADFRVVEPRKRYRLGQHFEVEFIPVTHSIPGSYAIALKTPLGWVVHTGDYKFDPTPPLG 176 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 TD++ L +G EG+L L+ D+ R G SE + + + I+ A+G V++TTF+S Sbjct: 177 PRTDEERLKQLGREGVLVLLSDAVRVERPGHTPSEAVVSETLDRIIGAAEGRVVLTTFAS 236 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL-YPREQL 294 +++RI I A + GRK+ + G S+++ +A ++G + L + PR+Q Sbjct: 237 NITRIDQAIRAAHRHGRKVAISGRSMEQSTRIAQELGYLHPPDGVLVPVEIAMTLPRKQA 296 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +++ TGSQGE +ALA+++ + +++L D VIFS+ IPGNE + ++L G+ Sbjct: 297 MLLTTGSQGEATAALARIASSDHPHIRLTPGDLVIFSATPIPGNEQTVSETIDQLFRMGI 356 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--AC 412 +VI D E VHVSGH +LK M + +RP+ V +HGE HL ++ELAL+ G Sbjct: 357 KVIYPDIEPTVHVSGHASREELKHMLRLLRPRFCVPVHGEYRHLALYRELALELGYLPER 416 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 V G +L + + V G L D + +R +++ G + + Sbjct: 417 VVIPELGSVLSFSREDVRREGTVDCGPVLVDF---VTPTHAVLRRRDEVASSGVIIAAFV 473 Query: 473 LDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 +D + PE+ G+ + + + + Q L Sbjct: 474 IDRETGKLIAGPEVTAEGL--NGKVSAETLAKVTEEFKRFL--AKQKGGFSHGYLVSRTK 529 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 S L L + +PL+ I+++ Sbjct: 530 SVLGRQLYRRAKFRPLILPLISEL 553 >gi|322386699|ref|ZP_08060324.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] gi|321269372|gb|EFX52307.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] Length = 579 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD+V P++ + Sbjct: 25 MSKSTIKLITLGGVRENGKNLYVAE----VDDSIFVLDAGLKYPENEQLGVDVVIPNMDY 80 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 81 LFENKDRIAGVFLTHGHADAIGALPYLLTEAKVPVFGSELTIELAKLFVKSNDAVKKFND 140 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +V+++ GNIV+TGD+K D A TD Sbjct: 141 FHVIDENTEIEFGETVVSFFRTTHSIPESLGIVVKTREGNIVYTGDFKFDQSASESYATD 200 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + + I D + + G V+V +S++SR Sbjct: 201 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGREITDTISDWDGRVIVAAVASNLSR 260 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + + A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 261 IQQVFEAAAETGRRVVLTGFDIENIVRTAIRLKKLSLADERLLIKPKEMSKFEDHELIIL 320 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 321 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVVARVENMIYQAGGVVK 380 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ GI + Sbjct: 381 LITQN--LRVSGHANARDLQLMLNLLQPKYLFPIQGEYRGLDAHAKAAMEVGILPENILI 438 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 439 PKRGSVMSYENGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 498 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 499 KEKKIISKAKVHTRGF-VYVKKSRDILRESTDLINKTVEDYLAQDNFDWGELKGTVRDSL 557 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + ++P + + ++ Sbjct: 558 AKFLFEQTKRRPAILPVVMEV 578 >gi|309775749|ref|ZP_07670745.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916512|gb|EFP62256.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 574 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 164/548 (29%), Positives = 268/548 (48%), Gaps = 13/548 (2%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG+GE+G NM + + + ++ID GV FP+++L GVD V PD +++K + + Sbjct: 2 GGLGEVGKNMYCFEH----ENEILIIDSGVRFPEENLLGVDYVIPDYNYLVKNNRKRKIL 57 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 ITH HEDH G + L + + +YA FA+ L+ K R+ + + I V Sbjct: 58 VITHGHEDHIGGIPFLLKSVDIEAIYAPAFAVALINKKLEERRMLRSVKIIEINDRSSVK 117 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + F+ HSIP+++ ++I +P G IVHTGD+K D + +D + +G G Sbjct: 118 MQHFTCGFFNTTHSIPDSLGILINTPNGRIVHTGDFKFDLTPVGT-NSDYQVMAYMGQIG 176 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + L+ DSTN+ E ISEK + I D MK G ++V TF+S+V R+ I++ A Sbjct: 177 VDLLLSDSTNSGVEDFSISEKKVAAEILDTMKKTSGRLIVATFASNVYRVSQILEAAVAC 236 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 GRK+++ G S++ VV++ +G IK +Q FLS + P + ++ TGSQGEP +AL Sbjct: 237 GRKVIIFGRSMENVVTIGRKMGKIKVGEQHFLSPDQLSRTPANKTCIVCTGSQGEPLAAL 296 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 ++++ G R +KL DTV+FSS IPGN ++ + N+L G V+ + +H +G Sbjct: 297 SRIANGTHRYIKLIPGDTVVFSSSPIPGNGASVNQVVNKLFRAGANVLTKSILSNLHTTG 356 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP---VRNGKMLRLFP 426 H + K M Q I+P+ + IHGE LV HKE + G+A ++ Sbjct: 357 HASQEEQKLMLQLIKPKYFMPIHGEYKMLVQHKETGKETGLADDHIFTCANGDVLILRNH 416 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEI 485 E + DG I + + R L+ G ++ + +D + P I Sbjct: 417 QVFESSFRIQADDIYVDGNDISGVSTAVLKDRTILADNGLVAAIIAIDSKENKVLCKPVI 476 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 V G + D + + + V + + + R L+ + S L L + Sbjct: 477 VSRGF-VFIKDSQGLLREAEQIVYAALNEKMKE-RTTFSELKNCVRSTLEPFLYNKTHRN 534 Query: 546 PLVTVFIN 553 P+V I Sbjct: 535 PIVIPVII 542 >gi|78356184|ref|YP_387633.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218589|gb|ABB37938.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 554 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 179/544 (32%), Positives = 285/544 (52%), Gaps = 14/544 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLGG GEIG+N L+ + S +++DCG+ FP D GVD+V P + +I+ ++ Sbjct: 9 LTLTPLGGCGEIGLNCTLWSTPAGS----VLVDCGLMFPDDYHLGVDVVIPRLEYILAQK 64 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + ++ I +TH HEDH GAL L +L VP+Y S F + L+E+K + ++ ++ Sbjct: 65 ERMLGIVLTHGHEDHIGALPWLLPYLQVPIYGSRFTLALVESKLREHNLLDRVRLVTVGP 124 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 +G V HSI E L + +P G +VHTGD+K+D D I G TD ++ Sbjct: 125 EKPCPIGDMVFHFFPVCHSIIEGYGLGVETPAGRVVHTGDFKIDPDPIDGHFTDLEAFRG 184 Query: 186 IGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 E G+ L+ DSTN REG +SE+ I+ I AKG V++T FSS + RI+ + Sbjct: 185 FAQEDGVDLLLSDSTNIEREGFSVSEREIQTTFTRIFSQAKGRVIITLFSSHIQRIQQVF 244 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 DIA + GRK+ + G SL V +A ++G ++ ++ G E ++++ TGSQG Sbjct: 245 DIAARFGRKVAVSGRSLMHNVDLARELGYLRILGGTYVDAADIGGMADENVVLLVTGSQG 304 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP SAL++++ GE + + + DTVI SSR IPGN AI + N L G V + + Sbjct: 305 EPFSALSRIASGEHKLLDIHPGDTVIMSSRFIPGNTRAITRLINNLYRLGAEVYYDKVQA 364 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP--PVRNGKM 421 +H SGH + +L+ M Q +RP+ V +HGE HLV H LA++ G+ + +G Sbjct: 365 -IHASGHAHREELRLMLQTVRPRHFVPVHGEYRHLVKHSRLAVECGVPPECSLILEDGDP 423 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIF 480 L L D + + L DG +G + +R L G + V +++D + + I Sbjct: 424 LTLTRDGVRREAHINVESVLVDGKGVGDVGQSVLRERHILGGEGMVVVVMVVDENIWEIL 483 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P+IV G ++ + + ++ ++P D+ L++ I S LR +K Sbjct: 484 VGPDIVSKGF-VFEQHYNHVLEDAKCIILDLFENIPPG---DVTYLQDRIRSTLRRFFRK 539 Query: 541 VWGK 544 V + Sbjct: 540 VLER 543 >gi|322390354|ref|ZP_08063881.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321142955|gb|EFX38406.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 553 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 148/556 (26%), Positives = 256/556 (46%), Gaps = 13/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++ + + Sbjct: 4 IKLVTLGGVRENGKNLYVAE----VNDSIFVLDAGLKYPENEQLGVDVVIPNMDYLFENK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISFQ 124 + +F+TH H D GAL L + VPV+ + I L + KK Sbjct: 60 DRIAGVFLTHGHADAIGALPYLLAEAKVPVFGTELTIELAKLFVKSNDSVKKFNDFHVID 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D G + + HSIPE++ +VI +P GNIV+TGD+K D A TD L Sbjct: 120 QNSEIDFGDAVVSFFQTTHSIPESIGIVIGTPEGNIVYTGDFKFDQTASESYATDFARLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE+ + I D + + G V+V +S++SRI+ + Sbjct: 180 EIGREGVLALLSDSANADSNIQVASEQEVGDAILDTIADWDGRVIVAAVASNLSRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 240 DAAAETGRRVVLTGFDVENIVRTAIRLNKLSLANEKLLIKPKEMSRFEDHELIILETGRM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 300 GEPINGLRKMSIGRHRYVEIKDGDLVYVVTTPSIAKEAVVARVENMIYQAGGIVK--LIT 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH DL+ M +RP+ L I GE L AH +A++ GI + + G Sbjct: 358 SSLRVSGHGNARDLQLMINLLRPKYLFPIQGEYRELDAHARVAMEVGILPENIFIPKRGT 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 ++ V G + DG IG ++ + R+ LS G V + ++ I Sbjct: 418 VMEYEKGDFVPAGSVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNRKEKKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + G Y I + + V +V D D L+ + L L Sbjct: 478 ISKARVHTRGF-VYVKKSRDILRESCELVNQSVEDYLAQDSFDWGELKGLVRDNLSKFLF 536 Query: 540 KVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 537 EQTKRRPAILPVVMEV 552 >gi|15604306|ref|NP_220822.1| hypothetical protein RP441 [Rickettsia prowazekii str. Madrid E] gi|3860998|emb|CAA14898.1| unknown [Rickettsia prowazekii] gi|292572055|gb|ADE29970.1| Putative hydrolase of themetallo-beta-lactamase superfamily [Rickettsia prowazekii Rp22] Length = 560 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 203/552 (36%), Positives = 319/552 (57%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----KGKWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+L+ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KYKKDLVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ FS+E V + HS PE A++IR+ GNI+HTGDWK D+D ILG D++ Sbjct: 126 VKPGSKINLEPFSLEMVPLTHSAPEMQAIMIRTDSGNILHTGDWKFDNDPILGKKVDEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLIDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A GRK+VL G SL R++ A + G K +S+ + R++L+VIATG Q Sbjct: 246 IMHAARLAGRKVVLTGRSLYRMIFAAQESGYFKDLAPLISERDVSRFRRKELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +A A+L+ ++KLA +DT+IFS++ IPGNE I + N V+ GV V+ E + Sbjct: 306 GESMAATAKLASNSHPSIKLAPQDTMIFSAKIIPGNEKKIFRLFNVFVKAGVEVMTER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIEHAIEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L P+ ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKIRRRMRESGIVVASVVINKKGLLSAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + T+ + + + ESI S +R LK+ Sbjct: 485 PILSMPGLLDPKEDIA-LVNLIKNDIKELITIQKQRAKKVLSDEQVIESIKSTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P + V + Sbjct: 544 EINKSPFIIVNL 555 >gi|312867522|ref|ZP_07727730.1| ribonuclease J 2 [Streptococcus parasanguinis F0405] gi|311096928|gb|EFQ55164.1| ribonuclease J 2 [Streptococcus parasanguinis F0405] Length = 553 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 148/556 (26%), Positives = 256/556 (46%), Gaps = 13/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++ + + Sbjct: 4 IKLVTLGGVRENGKNLYVAE----VNDSIFVLDAGLKYPENEQLGVDVVIPNMDYLFENK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISFQ 124 + +F+TH H D GAL L + VPV+ + I L + KK Sbjct: 60 DRIAGVFLTHGHADAIGALPYLLAEAKVPVFGTELTIELAKLFVKSNDSVKKFNDFHVID 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D G + + HSIPE++ +VI +P GNIV+TGD+K D A TD L Sbjct: 120 QNSEIDFGDAVVSFFQTTHSIPESIGIVIGTPEGNIVYTGDFKFDQTASESYATDFARLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE+ + I D + + G V+V +S++SRI+ + Sbjct: 180 EIGREGVLALLSDSANADSNIQVASEQEVGDAILDTIADWDGRVIVAAVASNLSRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 240 DAAAETGRRVVLTGFDVENIVRTAIRLNKLSLANEKLLIKPKEMSRFEDHELIILETGRM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 300 GEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVVARVENMVYQAGGIVK--LIT 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH DL+ M +RP+ L I GE L AH +A++ GI + + G Sbjct: 358 SSLRVSGHGNARDLQLMINLLRPKYLFPIQGEYRELDAHARVAMEVGILPENIFIPKRGT 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 ++ V G + DG IG ++ + R+ LS G V + ++ I Sbjct: 418 VMEYEKGDFVPAGSVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNRKDKKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + G Y I + + V +V D D L+ + L L Sbjct: 478 ISKARVHTRGF-VYVKKSRDILRESCELVNQSVEDYLAQDSFDWGELKGLVRDNLSKFLF 536 Query: 540 KVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 537 EQTKRRPAILPVVMEV 552 >gi|320450041|ref|YP_004202137.1| ribonuclease J 1 [Thermus scotoductus SA-01] gi|320150210|gb|ADW21588.1| ribonuclease J 1 [Thermus scotoductus SA-01] Length = 576 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 174/561 (31%), Positives = 285/561 (50%), Gaps = 22/561 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +PLGG+GEIG N+ ++ + + ++D G++FP + +PGVDL+ P + +++ Sbjct: 28 KDYVEIIPLGGMGEIGKNITVFRF----RDEIFVLDGGLAFPDEAMPGVDLLIPRVDYLI 83 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSK- 116 + R + A +TH HEDH G L + + VP+Y + +GLL+ K + Sbjct: 84 ENRHLIKAWILTHGHEDHIGGLPFILPMVFGKESQVPIYGAKLTLGLLKGKLEEFGLRPG 143 Query: 117 KIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 D++ VG F+++ R+ HSIP+ LVIR+PVG IVHTGD+KLD I G Sbjct: 144 SFNLKEISPDDRISVGRYFTLDLFRMTHSIPDNSGLVIRTPVGTIVHTGDFKLDATPIDG 203 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 ++ + G EG+L L+ DSTNA R G SE I K + ++ A G V VTTF+S Sbjct: 204 KLSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEMEIAKELDRVIARAPGRVFVTTFAS 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + RI+++I AE+ GRK+ + G S+ R +A+++G +K + E P Q++ Sbjct: 264 HIHRIQAVIWAAEKYGRKVAMEGRSMVRFSRIAMELGYLKVKDRLYTLEEVKDLPDHQVL 323 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ATGSQG+P S L +L+ + + DTVI SS IPGNE A+ + NRL G Sbjct: 324 ILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAY 383 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 V+ VH SGH +LK + P+ + HGE H K LA Sbjct: 384 VLY-PPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQTNFKWLAESMSRPPEKT 442 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG + RL D E + +V G+ DG +G + +A R+ ++ G + + L Sbjct: 443 LIGENGAIYRLTRDTFEKVGQVPSGVLYVDGLGVGDITEEILADRQHMAEEGIVVITALA 502 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 V E+V G G ++ + + + + + + ++ L+ +R+ I Sbjct: 503 SQD----PVVEVVSRGFV---KAGERLLGEVKRMALEALQNGVREKKT-LERIRDDIYFP 554 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 ++ LKK G+ P++ + + Sbjct: 555 VKKFLKKATGRDPMILPVVIE 575 >gi|300811974|ref|ZP_07092431.1| putative Ribonuclease J 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497035|gb|EFK32100.1| putative Ribonuclease J 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 624 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 144/571 (25%), Positives = 262/571 (45%), Gaps = 21/571 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + L GV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLSGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-----AKR---VYERV 114 + + IF+TH H D GAL + +PV+ S I L + AK + Sbjct: 58 QYGDQVAGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVELAKIDVQRENKR 117 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 A ++D S+ HS+P+++ +VI +P G IV+TGD+K D A Sbjct: 118 RNNQLFNVIDADTEIDFKNASVSFFHTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARP 177 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 TD L I G+LAL+ DS+NA SE + I ++ +NAKG ++V + Sbjct: 178 AYRTDMTRLAEIAKNGVLALLPDSSNAEAVLPNASENEVGNYITNVFRNAKGRIIVAGKA 237 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQ 293 S+++R++ + + A R+++L G + ++V A+ +G ++ D L + + P E+ Sbjct: 238 SNLNRVQQVFNAAAATSRRVLLTGRDVAKIVHTAMKMGYLEVPDGLLMKAKELKDVPDEK 297 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 +++ TG GEP +L +++ R + + E D V ++ E + + + G Sbjct: 298 TVILETGRMGEPLQSLQKMANNRHRTITIHEGDLVFIATTPSHAVETTVAITSDMVYRAG 357 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC- 412 VI +H SGH DL+ + ++P++LV + G+ L A K+LA++ G+ Sbjct: 358 GTVIELGRN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPD 415 Query: 413 -VPPVRNGKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSV 469 V +NG L D V + DG +G ++ + R LS G Sbjct: 416 DVYITQNGDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIA 475 Query: 470 NVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRE 528 V +D I P++ G Y K+ ++ + + + ++ D L++ Sbjct: 476 VVTIDRKKKKIVSEPQVTSRGF-VYIKANQKLMNDSIQVIKDAIQANFEHKKFDWTELKQ 534 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + S+L L K ++P+V + ++++ R Sbjct: 535 DMRSSLGKFLYKQTNRRPVVLPVVMEVNQNR 565 >gi|210135591|ref|YP_002302030.1| ATP/GTP binding protein [Helicobacter pylori P12] gi|210133559|gb|ACJ08550.1| ATP/GTP binding protein [Helicobacter pylori P12] Length = 691 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ +G + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASLGVFVATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 673 ALFKKFRKYPAIICHVH 689 >gi|328468635|gb|EGF39632.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus MTCC 5463] Length = 525 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 152/524 (29%), Positives = 271/524 (51%), Gaps = 9/524 (1%) Query: 38 DCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVY 96 DCG+ FP+DDL G++ V D ++++K RK + A+ ++H HEDH G + L + +PVY Sbjct: 2 DCGIKFPEDDLLGINYVISDYSYLIKNRKKIKALVVSHGHEDHIGGIPFLLEKIPEIPVY 61 Query: 97 ASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 A+PFA+ L+ K + K + S+ R HSIP+T+ + + +P Sbjct: 62 ATPFALSLIRGKLEEHGILKTTELHEEHEDTVLKFKKLSVSFFRTTHSIPDTLGIAVHTP 121 Query: 157 VGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 +G +V TGD+K D ++ D + +G EG+LAL+ DSTNA SE+ + + Sbjct: 122 LGAVVFTGDFKFDLTPVMNQPAPDFQKMAQLGKEGVLALLSDSTNAEVTQFTKSERFVAQ 181 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 ++++I+ G ++ TF+S++ R+ + I A IGRK+ + G S++ V+ ID+G + Sbjct: 182 SLHNIITGIHGRIIFATFASNLYRVSTAIQAAIDIGRKVAIFGRSMENGVANGIDLGYLN 241 Query: 276 KD-QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 L ++ E P ++++++ TGSQGEP +AL++++ G R + L DTVIFSS Sbjct: 242 VPRDLIVNAEEINKLPPDKVMILCTGSQGEPLAALSRIANGTHRQITLQPGDTVIFSSNP 301 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 IPGN +++ H+ N+L+E G VI VH SGH +LK M + +P+ ++ +HGE Sbjct: 302 IPGNTLSVNHLINKLMEGGANVIHGRVN-NVHTSGHGGQEELKMMVRLSKPKYMIPVHGE 360 Query: 395 PLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFAD 452 V H +LA + G+ + NG+++ P+ I + D + Sbjct: 361 YRMQVIHTQLAQEAGVPAENTFVLSNGEVVCFGPNGARIAGRIPADDVYVDTSGTADVGN 420 Query: 453 LGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT 511 + + R+ LS G + +D H + P+I+ G Y + ++ K V Sbjct: 421 VVVHDRQILSDEGLVVAVATVDYKHKRVLAGPDILSRGF-VYMRESTELINQAQKHVYHV 479 Query: 512 VVD-LPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + + + + + ++++IS L L ++P++ I + Sbjct: 480 LRNEMAKSDKPKESDIKKAISENLSDFLYSKTERRPMILPIIIE 523 >gi|38606906|gb|AAR25445.1| metallo beta subunit lactamase [Lactobacillus johnsonii] Length = 585 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 138/554 (24%), Positives = 241/554 (43%), Gaps = 12/554 (2%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E G NM + ++D G+ +P L G+D+V PD+ F + Sbjct: 4 LGGARENGKNMYAV----QVEDEIFIMDAGLKYPDSSLLGIDVVIPDLQFFQDYADKIAG 59 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQAGDKV 129 IF+TH H D GAL + +PV+ S I L + R K A ++ Sbjct: 60 IFLTHGHADSIGALPYILRDHDIPVFGSKLTIELAKIAVQRENRRRKNDLFHVIDADTEI 119 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + ++ + HSIP+++ + I + G IV+TGD+K D A G TD L I + Sbjct: 120 EFKNANVSFFKTTHSIPDSLGIDISTKEGEIVYTGDFKFDPSAKKGYRTDFVRLSEIAQK 179 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DSTNA + I+K IY+I +N G ++ +S++ R++ I A Sbjct: 180 GVLALLSDSTNAEANFPNDRQTSIEKYIYNIFENYDGRIIAAAKASNIVRVQEIFQAAAA 239 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 GR + L G ++V A+ +G + L + + P +L+++ TG GEP + Sbjct: 240 TGRHVFLTGRDAGKIVYTAMKLGYLNVPKGLLVHSKDLKKIPDNELVILETGRMGEPLKS 299 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++ R +K+ + D V ++ E + + + G V + H S Sbjct: 300 LQKMATNRHRMIKIKKGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELGRDK--HTS 357 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFP 426 GH DL+ + ++P+ L+ + GE L HK+LA++ + NG L Sbjct: 358 GHATGRDLQMLIDTLKPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHNGDAYALEK 417 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEI 485 D V + DG +G ++ + R LS G V +D I P + Sbjct: 418 GRFYRTDAVPGEDIMIDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKKKIISEPRV 477 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKK 545 G Y + + V + + ++ D L++ + + + L K G++ Sbjct: 478 STRGF-VYIKANHALMNGAADVIKEAVNNNFEHKKFDWTELKQDVRNDVEKYLYKQTGRR 536 Query: 546 PLVTVFINKISRQR 559 P+V + ++++ R Sbjct: 537 PVVLPVVMEVNQNR 550 >gi|194476911|ref|YP_002049090.1| hypothetical protein PCC_0441 [Paulinella chromatophora] gi|171191918|gb|ACB42880.1| hypothetical protein PCC_0441 [Paulinella chromatophora] Length = 657 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 164/564 (29%), Positives = 286/564 (50%), Gaps = 18/564 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K L +PLGG+ EIG N ++ YG + +++D G++FP D + GV++V PD T++ Sbjct: 11 KKPTLRIIPLGGLHEIGKNTCVFEYG----DELMLVDGGLAFPSDGMHGVNVVLPDTTYL 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV-YASPFAIGLLEAKRVYERVSKKIPC 120 + +K + + +TH HEDH G + +P+ Y A+ +L+ K V+ + Sbjct: 67 RENQKRIRGMIVTHGHEDHIGGIPHHLRNFTIPIIYGPRLAMSMLQGKMEEAGVTDRTII 126 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + + +G F +E +R HSI ++ L I +P+G ++ TGD+K+D + G+ D Sbjct: 127 KTVNPRETAQIGQYFKVEFIRNTHSIADSFTLAITTPIGVVIFTGDFKVDHTPVDGEYFD 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + G G+L L+ DSTNA G E+ + N+ + +AKG ++ TTF+SS R Sbjct: 187 LQRIAHYGERGVLCLLSDSTNAELPGFTFPERSVYPNLERHISHAKGRIIFTTFASSTHR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 + I+++A + RK+ LLG S+ V++ A ++G I+ D+LF+ + +P + +++ Sbjct: 247 VAMILELAVKYHRKVGLLGRSMLNVIAKARELGYIRCPDELFVPIKQIRDFPDRETLLLM 306 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL+++SRGE V++ DT++FS+ IPGN +++ + +RL+ G +VI Sbjct: 307 TGSQGEPLAALSRISRGEHPQVQIKATDTIVFSASPIPGNTISVVNAIDRLMMLGAKVIY 366 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 E +HVSGH D K M RP+ V +HGE LVAH + A G+ + Sbjct: 367 GKGEG-IHVSGHGSQEDEKLMLALTRPKYFVPVHGEHRMLVAHAKTAHSMGVPADHTLII 425 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 NG + L + IE + V G+ L D G + +R+QL+ G +++ ++ Sbjct: 426 ENGDTVELTCESIEKGNAVKSGIELLDASRNGIVDARVLKERQQLAQDGIITLLAVISIE 485 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK--------DLKLLRE 528 + P + G+ + V Q R D ++ Sbjct: 486 GFMAAPPRVNLRGVITTADQRKMTLWAEREIVWVLENRWKQLTRNTDGNSPDVDWVGVQR 545 Query: 529 SISSALRSLLKKVWGKKPLVTVFI 552 I ++ L++ +PL+ + Sbjct: 546 EIEVGIQRRLRRELQVEPLIVCLV 569 >gi|170016929|ref|YP_001727848.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc citreum KM20] gi|169803786|gb|ACA82404.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Leuconostoc citreum KM20] Length = 605 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 140/565 (24%), Positives = 248/565 (43%), Gaps = 17/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + + D G+ +P+ D GVD+V PD +++K Sbjct: 3 DLSIIPFGGVRENGKNMYAI----TVNDEIFIFDAGLKYPETDQLGVDVVVPDFDYLIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPCISF 123 + +F+TH H D GAL + P++ S I L + + + Sbjct: 59 NDKIAGVFLTHGHADAIGALPYFLQQVQAPIFGSELTIELAKLAIKEQEALKDYDDYHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A ++D G ++ HSIP++M +V+ +P G IV+TGD+K D A TD L Sbjct: 119 NAKTEIDFGTVTVSFFNTTHSIPDSMGIVLGTPFGQIVYTGDFKFDQTAEKNYRTDIARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTFSSSVSRIRS 242 IG +LAL+ D+ + ++E I I + + N K +++ +S++ RI+ Sbjct: 179 VEIGQGKVLALLADAAGTEGDTDSVNESKISDYILETFRDNKKKRIIIAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID RK+VL G+ ++ VV AI + + +L ++ ++ + +++ Sbjct: 239 VIDATVATKRKLVLSGNDIENVVRTAIRLRKLYLPVPESKLLVNLKNAKNLAASETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE V++ E D V ++ E + ++ L +QG V Sbjct: 299 TGRMGEPIKHLNRMANGEDPYVRIGEDDLVFITTTPSTAMESVVAKTRDMLFKQGANVK- 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + SGH NDL+ M ++P + I GE + + K A + I + Sbjct: 358 -QISSDLRSSGHASRNDLQMMINVLKPDYFMPIQGEYRVMSSAKSAAEEVNIATDHIMMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + D E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFKWLDDHFELQDSFTIGETLIDGAGIGDIGNVVLRDRRILSEDGIFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSAL 534 + P++ G Y + K + + + + L + D L+ + L Sbjct: 477 KRQVVSKPKLTSRGF-VYVKANRDLMKEASEITVKQIENYLNTTKNFDWNELKNGVREVL 535 Query: 535 RSLLKKVWGKKPLVTVFINKISRQR 559 L ++P+V + ++++ R Sbjct: 536 SRYLFDQTRRRPMVMPVVMEVNQNR 560 >gi|15646039|ref|NP_208221.1| ATP-binding protein [Helicobacter pylori 26695] gi|2829454|sp|P56185|RNJ_HELPY RecName: Full=Ribonuclease J; Short=RNase J gi|2314602|gb|AAD08469.1| conserved hypothetical ATP-binding protein [Helicobacter pylori 26695] Length = 689 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 158/555 (28%), Positives = 286/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 137 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 192 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 193 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 252 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 253 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 312 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 313 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 372 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 373 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 432 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 433 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 492 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 493 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 551 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + ++ + Sbjct: 552 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFVATIFVNKNK 611 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 612 QALLESSQFSSLGLVGF-KDEKPLIKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 670 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 671 ALFKKFRKYPAIICH 685 >gi|328944633|gb|EGG38794.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1087] Length = 555 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDAGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|308064182|gb|ADO06069.1| conserved hypothetical ATP-binding protein [Helicobacter pylori Sat464] Length = 697 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 286/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 145 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 200 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 201 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 260 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 261 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 320 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 321 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 380 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 381 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 440 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 441 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 500 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 501 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 559 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + + Sbjct: 560 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFVATIFVSKNK 619 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + K L + + +R Sbjct: 620 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLELLLKSSNAEILNSPKKLEDHTRNFIRK 678 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 679 ALFKKFRKYPAIICHVH 695 >gi|227512160|ref|ZP_03942209.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus buchneri ATCC 11577] gi|227084554|gb|EEI19866.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus buchneri ATCC 11577] Length = 578 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 136/565 (24%), Positives = 259/565 (45%), Gaps = 15/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN+ + + +GGV E G NM + ++DCG+ +P+++L G+D+V PD ++ Sbjct: 1 MKND-IKIMAIGGVRENGKNMYAI----DINGGIYILDCGLKYPENELLGIDVVIPDFSY 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIP 119 + + + ++ +F+TH H D GA+ S VPV+ S + L + E +S Sbjct: 56 LEENKDRIVGVFLTHGHADAIGAISYFLSEFDVPVFGSEMTVELAKLNVADSEELSSFDD 115 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D + + HSIP ++ + + + G IV+TGD+K D A T+ Sbjct: 116 FHIVSERSEIDFDDVKVTFFKTTHSIPGSLGIALHTSDGAIVYTGDFKFDQTAAPMYQTN 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L +G+EG+LAL+ DS NA SEK I + I + ++V + +S++ R Sbjct: 176 YSALTRLGDEGVLALLSDSGNAENPAPSASEKKIGEYITETFHYHDSRIIVASVASNILR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK---KDQLFLSDESFGLYPREQLIV 296 ++ + + A + GR++ L G L+R+V A+ + +K D L S + +++++ Sbjct: 236 MQQVFNAAAETGRRVFLTGHDLERIVKTALRLHNLKLPVDDLLIDSVKDVDKMNPDKVVI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG GEP A+ +++ E ++ + D V ++ E + ++ + V Sbjct: 296 IQTGKMGEPIKAIQRMANKEQGDINIEPNDLVFITTTPSTAMETTVAKTRDMVYRADGEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 E ++ SG DL+ + ++P+ L+ + GE L +H +LA Q G + Sbjct: 356 --EMISDQMNSSGDASQTDLQLIMNLLKPKFLIPVSGEYRLLESHAQLAKQIGFTDDRIF 413 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ + D + I + DG IG ++ + R+ LS G V +D Sbjct: 414 IPDKGDIVSVNKDEMWISGSAPISDTMIDGIGIGDIGNIVLRDRKVLSEDGIFVAVVTID 473 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P++ G Y + K + TV + + D L++ + Sbjct: 474 RKKKRIVSQPKLTSRGF-VYVKANKDLMKEAAGIIEKTVRNNLDHKEFDWSNLKQDVRET 532 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L L K ++P++ I ++++ Sbjct: 533 LSDYLYKQTKRRPVILPVIMEVNQH 557 >gi|297380588|gb|ADI35475.1| conserved hypothetical protein [Helicobacter pylori v225d] Length = 697 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 288/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 145 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 200 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 201 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 260 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 261 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 320 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 321 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 380 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 381 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 440 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 441 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 500 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 501 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHIARHKQTAISCGVPEKNIYLME 559 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + + + Sbjct: 560 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVSKNK 619 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 620 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 678 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 679 ALFKKFRKYPAIICHVH 695 >gi|317178133|dbj|BAJ55922.1| conserved hypothetical ATP-binding protein [Helicobacter pylori F16] Length = 694 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 142 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 198 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 257 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 258 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 317 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 318 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 377 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 378 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 437 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 438 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 497 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 498 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 556 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 557 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 616 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 617 QALLESSQFSSLGLVGF-KDEKHLTKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 675 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 676 ALFKKFRKYPAIICHVH 692 >gi|227509443|ref|ZP_03939492.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191155|gb|EEI71222.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 578 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 136/565 (24%), Positives = 259/565 (45%), Gaps = 15/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN+ + + +GGV E G NM + ++DCG+ +P+++L G+D+V PD ++ Sbjct: 1 MKND-IKIMAIGGVRENGKNMYAI----DINGGIYILDCGLKYPENELLGIDVVIPDFSY 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIP 119 + + + ++ +F+TH H D GA+ S VPV+ S + L + E +S Sbjct: 56 LEENKDRIVGVFLTHGHADAIGAISYFLSEFDVPVFGSEMTVELAKLNVADSEELSGFDD 115 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D + + HSIP ++ + + + G IV+TGD+K D A T+ Sbjct: 116 FHIVSERSEIDFDDVKVTFFKTTHSIPGSLGIALHTSDGAIVYTGDFKFDQTAAPMYQTN 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L +G+EG+LAL+ DS NA SEK I + I + ++V + +S++ R Sbjct: 176 YSALTRLGDEGVLALLSDSGNAENPAPSASEKKIGEYITETFHYHDSRIIVASVASNILR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK---KDQLFLSDESFGLYPREQLIV 296 ++ + + A + GR++ L G L+R+V A+ + +K D L S + +++++ Sbjct: 236 MQQVFNAAAETGRRVFLTGHDLERIVKTALRLHNLKLPVDDLLIDSVKDVDKMNPDKVVI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG GEP A+ +++ E ++ + D V ++ E + ++ + V Sbjct: 296 IQTGKMGEPIKAIQRMANKEQGDINIEPNDLVFITTTPSTAMETTVAKTRDMVYRADGEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 E ++ SG DL+ + ++P+ L+ + GE L +H +LA Q G + Sbjct: 356 --EMISDQMNSSGDASQTDLQLIMNLLKPKFLIPVSGEYRLLESHAQLAKQIGFTDDRIF 413 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ + D + I + DG IG ++ + R+ LS G V +D Sbjct: 414 IPDKGDIVSVNKDEMWISGSAPISDTMIDGIGIGDIGNIVLRDRKVLSEDGIFVAVVTID 473 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P++ G Y + K + TV + + D L++ + Sbjct: 474 RKKKRIVSQPKLTSRGF-VYVKANKDLMKEAAGIIEKTVRNNLDHKEFDWSNLKQDVRET 532 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L L K ++P++ I ++++ Sbjct: 533 LSDYLYKQTKRRPVILPVIMEVNQH 557 >gi|208435298|ref|YP_002266964.1| ATP/GTP binding protein [Helicobacter pylori G27] gi|208433227|gb|ACI28098.1| ATP/GTP binding protein [Helicobacter pylori G27] Length = 689 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 137 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 192 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 193 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 252 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 253 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 312 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 313 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 372 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 373 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 432 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 433 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 492 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 493 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 551 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ +G + ++ + Sbjct: 552 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASLGVFVATIFVNKNK 611 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 612 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEMLLKSSNAEILNNPKKLEDHTRNFIRK 670 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 671 ALFKKFRKYPAIICHVH 687 >gi|218296615|ref|ZP_03497333.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] gi|218242928|gb|EED09461.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] Length = 575 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 179/561 (31%), Positives = 287/561 (51%), Gaps = 22/561 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + +PLGG+GEIG N+ ++ Y + ++D G++FP++ +PGVDL+ P + F++ Sbjct: 27 SDPVEIIPLGGMGEIGKNITVFRY----RDEMFVLDGGLAFPEEGMPGVDLLIPRVDFLI 82 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSK- 116 + R + A +TH HEDH G L + + VP+Y + +GLL+ K + Sbjct: 83 ENRHRIKAWVLTHGHEDHIGGLPFILPMVFGKESQVPIYGARLTLGLLKGKLEEFGLRPG 142 Query: 117 KIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 D++ VG F+++ R+ HSIP+ LVIR+P+G IVHTGD+KLD I G Sbjct: 143 SFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGLVIRTPIGTIVHTGDFKLDATPIDG 202 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 V+ + G EG+L L+ DSTNA R G SE I K + ++ A G V VTTF+S Sbjct: 203 KVSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEMEIAKELDRVIGRAPGRVFVTTFAS 262 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + RI+S+I AE+ GRK+ + G S+ + +A+++G +K + E P Q++ Sbjct: 263 HIHRIQSVIWAAEKYGRKVAMEGRSMVKFSRIAMELGYLKVKDRLYALEEVMDLPDHQVL 322 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ATGSQG+P S L +L+ + + DTVI SS IPGNE A+ + NRL G Sbjct: 323 ILATGSQGQPMSVLHRLAFEGHSRMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAY 382 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 V+ VH SGH +LK + P+ + HGE H K LA Sbjct: 383 VLY-PPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQTNFKWLAESMSRPPEKT 441 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG + RL P E + V HG+ DG +G + +A RR ++ G + + L Sbjct: 442 LIGENGAIYRLTPHTFEKVGTVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVITALA 501 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 V E+V G G K+ + + + ++ + ++ L+ +R+ I Sbjct: 502 GED----PVVEVVSRGFV---KAGEKLLGEVRRMALEALLAGIREKKP-LERIRDDIYYP 553 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 ++ LKK G+ P++ + + Sbjct: 554 VKKFLKKATGRDPMILPVVIE 574 >gi|188528193|ref|YP_001910880.1| conserved hypothetical ATP-binding protein [Helicobacter pylori Shi470] gi|188144433|gb|ACD48850.1| conserved hypothetical ATP-binding protein [Helicobacter pylori Shi470] Length = 697 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 287/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 145 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 200 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 201 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 260 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 261 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 320 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 321 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 380 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 381 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 440 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 441 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 500 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 501 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 559 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + + + Sbjct: 560 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVSKNK 619 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + K L + + +R Sbjct: 620 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLELLLKSSNAEILNSPKKLEDHTRNFIRK 678 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 679 ALFKKFRKYPAIICHVH 695 >gi|327462702|gb|EGF09024.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1057] Length = 555 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFILDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|327468464|gb|EGF13949.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK330] Length = 555 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|114778014|ref|ZP_01452914.1| hypothetical protein SPV1_05412 [Mariprofundus ferrooxydans PV-1] gi|114551620|gb|EAU54173.1| hypothetical protein SPV1_05412 [Mariprofundus ferrooxydans PV-1] Length = 552 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 174/559 (31%), Positives = 280/559 (50%), Gaps = 11/559 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L P GGVGE G NM +Y +++DCG+ FP+ GVD+V PDI Sbjct: 1 MTDPVLRCFPFGGVGEFGKNMMVY----AVDDDAVIVDCGMGFPEPGQHGVDIVVPDIAA 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + A+ +TH HEDH G + L L +PVY + + L+ +K + Sbjct: 57 LDELGLKIHALILTHGHEDHIGGVPILLPRLKLPVYGTEVTLALVRSKLSETNYKGDLRA 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + G + +G F +E V V HSI + +++ I + +G ++HTGD+K D I G T Sbjct: 117 LP-EDGTTIPIGPFQVEGVPVTHSIMDAVSVAIHTVLGVVIHTGDFKFDPAPIDGRATAL 175 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G++G++ L DSTNA R G+ SE+ + I + KG V+VTTF+S++ RI Sbjct: 176 HRFAQLGDQGVVLLASDSTNATRAGSGPSERIVGPAIRQAVSQCKGKVVVTTFASNMFRI 235 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + I+D A GR++ + G SL+R +S+A D+ + F+ + P +L++IAT Sbjct: 236 QQIVDAAIACGRRVSVAGRSLERNMSIAQDLKRLNIPAGTFVDIKQSQHVPDHELLIIAT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE R+A+ +++ G V+L + D VIFSS IPGNE I + N + +G R++ Sbjct: 296 GSQGESRAAVGRIAHGRFTGVQLGQGDLVIFSSSNIPGNERVIAGLYNHIYRRGARILH- 354 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 + VHVSGH ++LK M Q RP+ +HGE +L+ H++LA+ G+A Sbjct: 355 AGQASVHVSGHAQAHELKMMIQLTRPKYFYPVHGEFRNLMEHRDLAVATGVAFERTIIAE 414 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH- 476 NG + L I G DG + + RR L+ G +S V+ H Sbjct: 415 NGHSVELDSAGIRPGPGFHAGAIFVDGDSRDEIDGFVLRDRRFLAEDGMISATVIFSQHE 474 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + PE+ G+ ++ + + + L DL +E + LR Sbjct: 475 GTLLSPPELEARGVL-HEDVSEDVLTDASHDLAGFLGGLDHELLADLDATKEEVRLFLRR 533 Query: 537 LLKKVWGKKPLVTVFINKI 555 K+ G++P+V + I Sbjct: 534 WCKRRLGRRPMVLPMVVAI 552 >gi|332365183|gb|EGJ42946.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1059] Length = 555 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|317181110|dbj|BAJ58896.1| conserved hypothetical ATP-binding protein [Helicobacter pylori F32] Length = 690 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 138 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 193 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 194 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 253 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 254 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 313 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 314 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 373 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 374 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 433 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 434 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 493 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 494 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 552 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 553 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTGIVQQREEVASAGVFAATIFVNKNK 612 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 613 QVLLESSQFSSLGLVGF-KDEKHLTKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 671 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 672 ALFKKFRKYPAIICHVH 688 >gi|261838703|gb|ACX98469.1| ATP/GTP binding protein [Helicobacter pylori 51] Length = 694 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 142 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 198 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 257 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 258 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 317 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 318 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 377 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 378 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 437 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 438 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 497 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 498 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 556 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 557 DGDQVEVGPAFIKKVGAIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 616 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 617 QALLESSQFSSLGLVGF-KDEKHLTKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 675 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 676 ALFKKFRKYPAIICHVH 692 >gi|227524110|ref|ZP_03954159.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227088741|gb|EEI24053.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 578 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 136/565 (24%), Positives = 260/565 (46%), Gaps = 15/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN+ + + +GGV E G NM + ++DCG+ +P+++L G+D+V PD ++ Sbjct: 1 MKND-IKIMAIGGVRENGKNMYAI----DINGGIYILDCGLKYPENELLGIDVVIPDFSY 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIP 119 + + + ++ +F+TH H D GA+ S VPV+ S + L + E +S Sbjct: 56 LEENKDRIVGVFLTHGHADAIGAISYFLSEFDVPVFGSEMTVELAKLNVADSEELSSFDD 115 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D + + HSIP ++ + + + G IV+TGD+K D A T+ Sbjct: 116 FHIVSERSEIDFDDVKVTFFKTTHSIPGSLGIALHTSDGAIVYTGDFKFDQTAAPMYQTN 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L +G+EG+LAL+ DS NA + SEK I + I + ++V + +S++ R Sbjct: 176 YSALTRLGDEGVLALLSDSGNAENPASSASEKKIGEYITETFHYHDSRIIVASVASNILR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK---KDQLFLSDESFGLYPREQLIV 296 ++ + + A + GR++ L G L+R+V A+ + +K D L S + +++++ Sbjct: 236 MQQVFNAAAETGRRVFLTGHDLERIVKTALRLHNLKLPVDDLLIDSVKDVDKMNPDKVVI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG GEP A+ +++ E ++ + D V ++ E + ++ + V Sbjct: 296 IQTGKMGEPIKAIQRMANKEQGDINIEPNDLVFITTTPSTAMETTVAKTRDMVYRADGEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 E ++ SG DL+ + ++P+ L+ + GE L +H +LA Q G + Sbjct: 356 --EMISDQMNSSGDASQTDLQLIMNLLKPKFLIPVSGEYRLLESHAQLAKQIGFTDDRIF 413 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ + D + I + DG IG ++ + R+ LS G V +D Sbjct: 414 IPDKGDIVSVNKDEMWISGSAPISDTMIDGIGIGDIGNIVLRDRKVLSEDGIFVAVVTID 473 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P++ G Y + K + TV + + D L++ + Sbjct: 474 RKKKRIVSQPKLTSRGF-VYVKANKDLMKEAAGIIEKTVRNNLDHKEFDWSNLKQDVRET 532 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L L K ++P++ I ++++ Sbjct: 533 LSDYLYKQTKRRPVILPVIMEVNQH 557 >gi|222153245|ref|YP_002562422.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222114058|emb|CAR42450.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 554 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 146/559 (26%), Positives = 260/559 (46%), Gaps = 13/559 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIIALGGVREYGKNFYLVE----VNESIFILDSGLKYPENEQLGVDVVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F+TH H D GAL L S + VPV+ S I L + +KK Sbjct: 59 KDKVQGVFLTHGHADAIGALPYLLSEVSVPVFGSELTIELAKLFVKANNSTKKFKNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIP+++ +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFKDGLVSFFKTTHSIPDSLGIVIGTDQGNIVYTGDFKFDQAAREFYQTDLSRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ S NA SE + + + ++ A+G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSASANATSNIQIASESEVGEEMDHVIGEAEGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL GS ++ ++ AI + + ++L + + Y +LI++ G Sbjct: 239 FDSAASHGRRVVLTGSDIENIIRTAIRLKKLTIVDEKLLIKPKDMAKYEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V + D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMASGRHRYVNITTGDLVYIVTTPNVSKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M IRP+ L + GE L AH +LA + G+ + ++ G Sbjct: 359 N--LRVSGHANSRDLQLMINLIRPKYLFPVQGEYRDLAAHADLAEEVGLYPENIYIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L + V + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DIMILNEEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + V TTV + Q D L+ S+ L L Sbjct: 477 IVSKAKVNTRGF-VYVKKSRDILRESADLVNTTVENYLQQDNFDWGELKGSVRDELSKFL 535 Query: 539 KKVWGKKPLVTVFINKISR 557 ++P + + ++ + Sbjct: 536 FDQTKRRPAILPVVMEVRQ 554 >gi|325695440|gb|EGD37340.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK150] Length = 555 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + ++ + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|296875692|ref|ZP_06899757.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] gi|296433262|gb|EFH19044.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] Length = 553 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 146/556 (26%), Positives = 256/556 (46%), Gaps = 13/556 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++ + + Sbjct: 4 IKLVTLGGVRENGKNLYVAE----VNDSIFVLDAGLKYPENEQLGVDVVIPNMDYLFENK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQ 124 + +F+TH H D GAL L + VPV+ + I L + + V K Sbjct: 60 DRIAGVFLTHGHADAIGALPYLLAEAKVPVFGTELTIELAKLFVKGNDSVKKFNDFHVID 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D G + + HSIPE++ +VI + GNIV+TGD+K D A TD L Sbjct: 120 QNSEIDFGDAVVSFFQTTHSIPESIGIVIGTSEGNIVYTGDFKFDQTASESYATDFARLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA + SE+ + I D + + G V+V +S++SRI+ + Sbjct: 180 EIGREGVLALLSDSANADSKIQVASEQEVGDEILDTIADWDGRVIVAAVASNLSRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 240 DAAAETGRRVVLTGFDVENIVRTAIRLNKLSLANEKLLIKPKEMSRFEDHELIILETGRM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 300 GEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVVARVENMVYQAGGIVK--LIT 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH DL+ M +RP+ L I GE L AH +A++ GI + + G Sbjct: 358 SSLRVSGHGNARDLQLMINLLRPKYLFPIQGEYRELDAHARVAMEVGILPENIFIPKRGT 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 ++ V G + DG IG ++ + R+ LS G V + ++ I Sbjct: 418 VMEYEKGDFVPAGSVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNRKEKKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + G Y I + + V +V D L+ + L L Sbjct: 478 ISKARVHTRGF-VYVKKSRDILRESCELVNQSVEGYLAQDSFDWGELKGLVRDNLSKFLF 536 Query: 540 KVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 537 EQTKRRPAILPVVMEV 552 >gi|317010202|gb|ADU80782.1| Ribonuclease J [Helicobacter pylori India7] Length = 691 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 288/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDVGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ +G + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASLGVFVATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEVLLKSSNAETLNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 673 ALFKKFRKYPAIICHVH 689 >gi|315585814|gb|ADU40195.1| metallo-beta-lactamase [Helicobacter pylori 35A] Length = 694 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 159/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 142 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 198 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 257 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 258 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 317 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 318 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 377 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 378 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 437 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 438 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 497 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 498 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 556 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 557 DGDQVEVGPASIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 616 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +GI + D + K + + + + K L + + +R Sbjct: 617 QALLESSQFSSLGIVGF-KDERHLTKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 675 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 676 ALFKKFRKYPAIICHVH 692 >gi|325996688|gb|ADZ52093.1| Ribonuclease J [Helicobacter pylori 2018] gi|325998280|gb|ADZ50488.1| putative ribonuclease J [Helicobacter pylori 2017] Length = 695 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 143 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 198 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 199 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 258 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 259 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 318 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 319 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 378 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 379 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 438 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 439 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 498 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 499 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 557 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 558 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTNIVQQREEVASAGVFAATIFVNKNK 617 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 618 QTLLESSQFSSLGLVGF-KDEKHLVKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 676 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 677 ALFKKFRKYPAIICHVH 693 >gi|308062690|gb|ADO04578.1| conserved hypothetical ATP-binding protein [Helicobacter pylori Cuz20] Length = 697 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 288/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 145 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 200 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 201 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 260 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 261 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 320 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 321 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 380 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 381 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 440 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 441 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 500 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 501 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 559 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + + + Sbjct: 560 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTGIVQQREEVASAGVFAATIFVSKNK 619 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 620 QALLESSQFSSLGLVGF-KDERHLTKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 678 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 679 TLFKKFRKYPAIICHVH 695 >gi|317182632|dbj|BAJ60416.1| conserved hypothetical ATP-binding protein [Helicobacter pylori F57] Length = 694 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 159/557 (28%), Positives = 288/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 142 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ K + K + Sbjct: 198 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGGKFDEHGLKKYRSYF 257 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 258 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 317 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 318 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 377 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 378 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 437 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 438 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 497 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 498 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 556 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 557 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 616 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +GI + D + K + + + + K L + + +R Sbjct: 617 QTLLESSQFSSLGIVGF-KDEKHLIKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 675 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 676 ALFKKFRKYPAIICHVH 692 >gi|15612388|ref|NP_224041.1| hypothetical protein jhp1323 [Helicobacter pylori J99] gi|11387373|sp|Q9ZJI6|RNJ_HELPJ RecName: Full=Ribonuclease J; Short=RNase J gi|4155934|gb|AAD06901.1| putative [Helicobacter pylori J99] Length = 692 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 158/555 (28%), Positives = 286/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 HQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 555 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 615 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 673 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 674 ALFKKFRKYPAIICH 688 >gi|325697370|gb|EGD39256.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK160] Length = 555 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKEIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|325686641|gb|EGD28667.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK72] Length = 555 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFILDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|332365886|gb|EGJ43643.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK355] Length = 555 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + ++ + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|217034557|ref|ZP_03439966.1| hypothetical protein HP9810_874g14 [Helicobacter pylori 98-10] gi|216942977|gb|EEC22460.1| hypothetical protein HP9810_874g14 [Helicobacter pylori 98-10] Length = 694 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 290/557 (52%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 142 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 197 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 198 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 257 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 258 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 317 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 318 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 377 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 378 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 437 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 438 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 497 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 498 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 556 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 557 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 616 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 617 QALLESSQFSSLGLVGF-KDEKHLTKEIQGGLKLLLKSSNAEILNNPKKLEDHTRNFIRK 675 Query: 537 LLKKVWGKKPLVTVFIN 553 +L K + K P + ++ Sbjct: 676 VLFKKFRKYPAIICHVH 692 >gi|307638087|gb|ADN80537.1| RNA-metabolising Zn-dependent hydrolase [Helicobacter pylori 908] Length = 695 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 143 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 198 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 199 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 258 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 259 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 318 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 319 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 378 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 379 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 438 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 439 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 498 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 499 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 557 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 558 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTNIVQQREEVASAGVFAATIFVNKNK 617 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 618 QTLLESSQFSSLGLVGF-KDEKHLVKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 676 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 677 ALFKKFRKYPAIICHVH 693 >gi|317179605|dbj|BAJ57393.1| conserved hypothetical ATP-binding protein [Helicobacter pylori F30] Length = 691 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 157/557 (28%), Positives = 287/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDVGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + + Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKRYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEILIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFVATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKHLIKEIQAGLELLLKSSNAEILNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 673 ALFKKFRKYPAIICHVH 689 >gi|254779941|ref|YP_003058048.1| Ribonuclease J [Helicobacter pylori B38] gi|254001854|emb|CAX30104.1| Ribonuclease J [Helicobacter pylori B38] Length = 692 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ +G + ++ + Sbjct: 555 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASLGVFVATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 615 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEMLLKSSNAEILNNPKKLEDHTRNFIRK 673 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 674 ALFKKFRKYPAIICHVH 690 >gi|324989812|gb|EGC21755.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK353] gi|324992546|gb|EGC24467.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK405] gi|327459958|gb|EGF06297.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1] gi|327472492|gb|EGF17923.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK408] gi|327488853|gb|EGF20652.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1058] gi|332360033|gb|EGJ37847.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1056] Length = 555 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|296110549|ref|YP_003620930.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] gi|295832080|gb|ADG39961.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] Length = 606 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 134/564 (23%), Positives = 247/564 (43%), Gaps = 15/564 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + + D G+ +P+ D GVD+V PD + +K Sbjct: 3 DLSIIPFGGVRENGKNMYAV----TVADEIFIFDAGLKYPETDQLGVDVVVPDFEYFIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPCISF 123 + +F+TH H D GAL + P++ S I L + + + Sbjct: 59 SDKIAGVFLTHGHADAIGALPYFLQQVQAPIFGSELTIELAKLAIKEQEALKDYNDYHII 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ HSIP+++ +V+ +P G +V+TGD+K D + G TD L Sbjct: 119 NEKTEIDFGKVTVSFFNTTHSIPDSLGIVLGTPYGQVVYTGDFKFDQTSDAGYETDIPRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRS 242 +G +LAL+ D+ + ++E I + I + + K ++V +S++ RI+ Sbjct: 179 VEVGRGKVLALLADAAGTGNDLDSVNESKISEYILETFRENKQKRIIVAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID R++VL G+ ++ VV AI + + +LF++ ++ P + +++ Sbjct: 239 VIDATVATKRQLVLSGNDIENVVRTAIRLRKLNLPIPESKLFVNLKNAKNLPISETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE + + D V ++ E + ++ L ++G V Sbjct: 299 TGRMGEPIKHLNRMANGEDPYIHIGVDDLVFITTTPSTAMESVVAKTRDMLFKRGADVK- 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + SGH NDL+ M ++PQ + + GE + + K A + I + Sbjct: 358 -QISSDLRSSGHASRNDLQMMINLLKPQYFMPVQGEYRVMTSAKAAAEEVHIVEDHIMMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + D E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFKWQSDHFELQDSFTVGETLIDGSGIGDIGNVVLRDRRILSEDGIFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P++ G + + + TV L + D L+ + L Sbjct: 477 KRQVVSKPKLTSRGFVYVKANRDLMKEASEITVKQIETYLTTTKNFDWNELKNGVREVLS 536 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L + ++P+V + ++++ R Sbjct: 537 RFLFEQTRRRPMVMPVVMEVNQNR 560 >gi|324995925|gb|EGC27836.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK678] Length = 555 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 146/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSVFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + ++ + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ + ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLLINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|308272059|emb|CBX28667.1| Ribonuclease J 1 [uncultured Desulfobacterium sp.] Length = 536 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 181/542 (33%), Positives = 296/542 (54%), Gaps = 11/542 (2%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G+NM + YG ++D G+ FP+D + GVD V PD+ ++ + + ++ + +THAH Sbjct: 2 GLNMMAFEYG----DSIFVVDAGLMFPEDYMLGVDFVIPDMLYLKQNKSRILGVVLTHAH 57 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 EDH GAL L ++VPV+ + F +GL+ + + + +K+ +G F IE Sbjct: 58 EDHIGALPYLLKEINVPVFGTSFTLGLVRHRLEEHSLISSALLYEISSSEKLKLGPFEIE 117 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 ++V HS+ + + L IR+P+G IVHTGD+K+ +TD GNEG+L L+ D Sbjct: 118 FIKVGHSVVDGVGLAIRTPLGLIVHTGDFKISYTMEGM-ITDVHGFARCGNEGVLCLLSD 176 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STN +EG IS K I + I I KG +++ F+S+++RI+ I++IAE +K++ Sbjct: 177 STNIEKEGYTISAKEIGETIARITAGCKGRIIIALFASNIARIQQIVNIAEARDKKVIFN 236 Query: 258 GSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 G S++ VS+A +G +K D L + Y +++I+I TGSQGEP SALA+++ G Sbjct: 237 GRSIEISVSIAKKLGFLKVADGLEIEINQINDYSDDEIIMITTGSQGEPLSALARMATGA 296 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 + + + + DT+I SS+ IPGNE AI +I N+L ++G VI E +HVSGH + +L Sbjct: 297 HKQISVKKNDTIILSSKFIPGNERAITNIINKLYKRGADVIYEKI-SNIHVSGHAFKEEL 355 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDE 434 K M ++P+ + IHGE HL H LA GI + NG+++ +I +E Sbjct: 356 KLMITLVKPEYFIPIHGEYRHLSLHARLAADVGIKKEKILLAENGQVIEFNEKGGKIKEE 415 Query: 435 VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG-VPEIVDIGIPAY 493 V G L DG IG + +RR LS G + VN+ D I PEIV G + Sbjct: 416 VATGRILIDGKGIGDVGRSVLKERRLLSEEGLVVVNMAFDEETGIIIYGPEIVSKGF-VF 474 Query: 494 DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 + + G + + ++ V D+ + ++ + +ALR ++P++ +F+ Sbjct: 475 ETETGHLLEDAKCVILEIVDDIATGVPDRVGKIKSRVQTALRKYFNFAIKRRPVILLFVI 534 Query: 554 KI 555 +I Sbjct: 535 EI 536 >gi|261840103|gb|ACX99868.1| metal-dependent hydrolase [Helicobacter pylori 52] Length = 700 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 288/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 148 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 203 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 204 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 263 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 264 KIIEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 323 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 324 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 383 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 384 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 443 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 444 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 503 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 504 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 562 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 563 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 622 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 623 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLELLLKSSNAEILNNPKKLEDHTRNFIRK 681 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 682 ALFKKFRKYPAIICHVH 698 >gi|317014801|gb|ADU82237.1| hypothetical protein HPGAM_07310 [Helicobacter pylori Gambia94/24] Length = 692 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 158/555 (28%), Positives = 287/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 555 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 615 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLEMLLKSSNAEILNNPKKLEDHTRNFIRK 673 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 674 ALFKKFRKYPAIICH 688 >gi|332358087|gb|EGJ35919.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK49] Length = 555 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSSVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV + D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEEYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|51473630|ref|YP_067387.1| hypothetical protein RT0428 [Rickettsia typhi str. Wilmington] gi|51459942|gb|AAU03905.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 560 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 201/552 (36%), Positives = 319/552 (57%), Gaps = 8/552 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L+F+PLGG EIGMN+ LY Y KW+MIDCG F D LPGVD++ D +FI Sbjct: 10 KNDLLFVPLGGSNEIGMNLNLYHY----KGKWLMIDCGSGFADDYLPGVDMIIADSSFIE 65 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K +K+L+ + +THAHEDH G + LW+ L P+Y + F L+ + +K I Sbjct: 66 KYKKDLVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKIHE 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + G K+++ F +E V + HS PE A++IR+ GNI+HTGDWK D+D ILG+ D++ Sbjct: 126 VKPGSKINLEPFLLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGEKVDEEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L + G+EG+LAL+CDSTN +G+ SE ++K++ DI+ V+V+TF+S+++R+ + Sbjct: 186 LKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLIDIIAGCPQMVVVSTFASNLARLDT 245 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I+ A GRK+VL G SL R++ A + G K +S+ + R++L+VIATG Q Sbjct: 246 IMHAARLAGRKVVLTGRSLYRMIFAAQESGYFKDLAPLISERDVSRFRRKELLVIATGCQ 305 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +A A+L+ ++KLA KDT+IFS++ IPGNE I + N V+ GV V+ E + Sbjct: 306 GESMAATAKLASNSHPSIKLAPKDTMIFSAKIIPGNEKKIFRLFNIFVKAGVEVMTER-D 364 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VHVSGHP ++L++MY IRP + + +HGEP+H+ H +LA + GI V NG ++ Sbjct: 365 HFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLARKNGIEHAIEVENGSVV 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 L + ++I +V +G DG + RR++ G + +V+++ + Sbjct: 425 LLELNNAKVISKVENGYLAVDGNYLLPVESPIFKIRRRMRDSGIVVASVVINKKGLLSAN 484 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVIT--TVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P + G+ D + L+ + + + + + + ESI S +R LK+ Sbjct: 485 PILSMPGLLDPKEDIA-LVNLIKNDIKELIAIQNQRVKKVLSDEQIIESIKSTIRKTLKQ 543 Query: 541 VWGKKPLVTVFI 552 K P++ V + Sbjct: 544 EINKSPVIIVNL 555 >gi|328950320|ref|YP_004367655.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] gi|328450644|gb|AEB11545.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] Length = 567 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 175/554 (31%), Positives = 293/554 (52%), Gaps = 18/554 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGG+GEIG N+ + Y + + +++D G++FP++ + GVD++ P I ++++ Sbjct: 26 VEIIPLGGMGEIGKNIFAFRY----NDEILVVDGGLAFPEEHMLGVDILIPRIDYLVENA 81 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK-KIPCISF 123 K + +TH HEDH GAL L+ L VP+Y + +GLL+ K + + Sbjct: 82 KYIKGWILTHGHEDHIGALPFLFPQLPKVPIYGAKLTLGLLKGKLEEFGLRPGEFDLNEV 141 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ +G F+++ R+ HSIP+ ++I +P+G IVHTGD+KLD I G V+ Sbjct: 142 GPDARLKIGRYFTVDLFRMTHSIPDNSGMIIHTPIGRIVHTGDFKLDPTPIDGQVSHLAK 201 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + G EG+L L+ DSTNA R G SE + K + ++ AKG V VTTF+S + RI+S Sbjct: 202 IAQAGAEGVLLLIADSTNAERPGITPSEAEVAKALDQVIGQAKGRVFVTTFASHIHRIQS 261 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +I AE+ GRK+ + G S+ + +A+++G ++ + + P E+++V+ATGSQ Sbjct: 262 VIRAAERYGRKVAMEGRSMLKFARIALELGYLEVKDRLYTVDEIKDLPDEEVLVLATGSQ 321 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G+P S L++L+ G + + DTVI SS IPGNE A+ + N+L G RV+ A Sbjct: 322 GQPMSVLSRLASGTHAKLSIRPGDTVILSSSPIPGNEEAVNRVINQLYALGARVLYPPA- 380 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 VH SGH +LK + P+ + HGE H K LA NG Sbjct: 381 YKVHASGHASQEELKLILSLTTPRFFMPWHGEIRHQTNFKWLAESMPNPPEKTIVAENGD 440 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L P+ I+I +V G DG +G D + +R+ +S G + + L Sbjct: 441 VVCLKPNDIQITGKVPAGALYVDGLGVGDITDEILEERQLMSADGVVVITALATRD---- 496 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 V E+V G G ++H + K + +V + ++ L+ +R+ I +R ++K Sbjct: 497 PVVEVVSRGFV---KAGQRLHNEIRKMALEMIVKGVRQKKP-LEEIRDEIYYPIRKFIRK 552 Query: 541 VWGKKPLVTVFINK 554 G+ P++ + + Sbjct: 553 TTGRDPILIPIVIE 566 >gi|325688903|gb|EGD30911.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK115] Length = 555 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSHIKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + +K + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|289550933|ref|YP_003471837.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Staphylococcus lugdunensis HKU09-01] gi|289180465|gb|ADC87710.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Staphylococcus lugdunensis HKU09-01] Length = 539 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 150/546 (27%), Positives = 271/546 (49%), Gaps = 11/546 (2%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GEI NM + + ++D G+ FP+D++ GVD+V PDIT++++ + L IF+ Sbjct: 1 MGEIAKNMYIVE----VDDEMFILDAGLMFPEDEMLGVDIVIPDITYVLENKARLKGIFL 56 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH HE GA+ + L VPVY S + L++ + KK+ + + Sbjct: 57 THGHEHAIGAVSYILEQLDVPVYGSKLTLALVKENMKARNIKKKVRYYTVNHDSVMKFKN 116 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 +I HSIP+++ + I + G IV+TG++K D D + IG G+ A Sbjct: 117 VNITFFNTTHSIPDSLGICIHTSYGAIVYTGEFKFDQSLQGNYAPDLKRMSEIGENGVFA 176 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 L+ DST A + G E I+ +IYD AKG ++V+ ++S+ RI+ +++ A ++ RK Sbjct: 177 LISDSTEAEKPGYNTPENVIETHIYDAFAKAKGRIIVSCYASNFIRIQQVLNTASKLNRK 236 Query: 254 IVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + LG SL+ ++A +G L + + YP+ ++++IA+G +GEP AL+Q+ Sbjct: 237 VSFLGRSLESSFNIARKMGYFDIPKDLLIPIDEVENYPKNEVVIIASGMEGEPIEALSQM 296 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 +R + + + + + D+V + A EV IG+ N LV G ++ +H S H Sbjct: 297 ARNKHKIMNIQKGDSVYLAITASANMEVIIGNTLNELVRAGAHIV--PNNKKIHASSHGC 354 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIE 430 +LK M ++P+ + + GE +AH +LA + G+ + V G ++ + Sbjct: 355 MEELKMMLNIMKPEYFIPVQGEFKMQIAHAKLANETGVAPEKIFLVEKGDVMHYDGKDMT 414 Query: 431 IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIG 489 + ++V G L DG +G ++ + R L+ G V LD H I PEI G Sbjct: 415 LSEKVTSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKHRRIAAGPEIQSRG 474 Query: 490 IPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVT 549 Y + ++ K + V V Q +R + +++++ + LL + ++P++ Sbjct: 475 F-VYVRESEELLKEAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMII 533 Query: 550 VFINKI 555 I++I Sbjct: 534 PVISEI 539 >gi|217032120|ref|ZP_03437620.1| hypothetical protein HPB128_16g80 [Helicobacter pylori B128] gi|298735610|ref|YP_003728135.1| ribonuclease J [Helicobacter pylori B8] gi|216946268|gb|EEC24876.1| hypothetical protein HPB128_16g80 [Helicobacter pylori B128] gi|298354799|emb|CBI65671.1| Ribonuclease J [Helicobacter pylori B8] Length = 691 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 158/555 (28%), Positives = 287/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLEMLLKSSNAEILNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 673 ALFKKFRKYPAIICH 687 >gi|125718930|ref|YP_001036063.1| metallo-beta-lactamase [Streptococcus sanguinis SK36] gi|125498847|gb|ABN45513.1| Metallo-beta-lactamase, putative [Streptococcus sanguinis SK36] Length = 555 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNVKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + ++ + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVGKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHGNARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|323350589|ref|ZP_08086251.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|322123271|gb|EFX94956.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] Length = 555 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 13/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGGV E G N+ + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSKSNVKLIALGGVRENGKNLYVAE----VDDSIFVLDVGLKYPENEQLGVDYVVPNMDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + ++ + +F+TH H D GAL +L + VPV+ S I L + KK Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLADAKVPVFGSELTIELAKLFVKNNDAVKKFND 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ G + R HSIPE++ +VI++ G+IV+TGD+K D A TD Sbjct: 117 FHVIDENTEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYTGDFKFDQSASPSYATD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + G V+V +S++SR Sbjct: 177 FGRLAEIGREGVLALLSDSANADSTVQVASESEVSKEIEDTIADWDGRVIVAAVASNLSR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 237 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D + + E + ++N + + G V Sbjct: 297 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEAVVARVENMIYQAGGIVK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A++ G+ + Sbjct: 357 LITQN--LRVSGHANARDLQLMINLLQPKYLFPIQGEYRGLDAHAKAAMEVGMLPENIFI 414 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 415 PKRGSIMEYDHGDFVPAGAVSAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNR 474 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ ++ +L Sbjct: 475 KEKKIISKAKVHTRGF-VYVKKSRDILRESSDIINKTVEDYLAQDSFDWGELKGAVRDSL 533 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 534 AKYLFDQTKRRPAILPVVMEV 554 >gi|116617740|ref|YP_818111.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096587|gb|ABJ61738.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 609 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 140/565 (24%), Positives = 251/565 (44%), Gaps = 17/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + ++D G+ +P+ D GVD+V PD +++K Sbjct: 3 DLSIIPFGGVRENGKNMYAV----TVNDEIFILDAGLKYPETDQLGVDVVVPDFEYLIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPCISF 123 + + +F++H H D GAL ++VP++ S I L + + + Sbjct: 59 TEKIAGVFLSHGHADAIGALPYFLQQVNVPIFGSELTIELAKLAIKDQPALKDYNDYHII 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + HSIPE++ +VI + G +V+TGD+K D A TD L Sbjct: 119 NEKSEIDFGNVKVSFFNTTHSIPESLGIVIGTEYGQVVYTGDFKFDQTAESYYRTDIPRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTFSSSVSRIRS 242 +G +LAL+ D+ ++E I I + + N K ++V +S++ RI+ Sbjct: 179 VEVGQRKVLALLADAAGTEGGADSVNESKIGDYILETFRDNKKKRIIVAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 IID RK+VL G+ ++ VV AI + ++ QLF+S ++ + +++ Sbjct: 239 IIDATAATKRKLVLSGNDIENVVRTAIKLKKLQLPLPESQLFVSLKNMKSLVAHETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE ++K+ D V ++ E + ++ + +QG V Sbjct: 299 TGRMGEPIKHLNRMANGEDAHIKIGSDDLVFITTTPSTAMESVVAKTRDMIFKQGADVKQ 358 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + SGH NDL+ M ++P + I GE + A K+ A + + + Sbjct: 359 ISTD--MRSSGHASRNDLQMMLNIMQPAYFMPIQGEYRVMSAAKDAAEEVNLPEDHILMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G +L E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFKLIDGQFELKDSFAIGETLIDGSGIGDIGNVVLRDRRILSEDGVFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSAL 534 + P++ G Y + K + + D + D L+ + L Sbjct: 477 KRQVVSKPKLTSRGF-VYVKANRDLMKEASDLTVKQIEDYLTNNKSFDWNELKAGVRDVL 535 Query: 535 RSLLKKVWGKKPLVTVFINKISRQR 559 L + ++P+V + ++++ R Sbjct: 536 SRFLFEQTRRRPMVMPVVMEVNQNR 560 >gi|312866119|ref|ZP_07726340.1| ribonuclease J 2 [Streptococcus downei F0415] gi|311098523|gb|EFQ56746.1| ribonuclease J 2 [Streptococcus downei F0415] Length = 553 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 148/557 (26%), Positives = 260/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ L + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIIALGGVRENGKNLYLAEI----NESIFVLDAGLKYPENEQLGVDVVIPNMDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 R + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 59 RDRVQGVFLTHGHADAIGALPYLLQDVRVPVFGSELTIELAKLVVKNNSQVKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ + HSIPE++ +V+ + GNIV+TGD+K D A LG TD L Sbjct: 119 DAQTEIEFKDAVVSFFSTTHSIPESLGIVLGTDQGNIVYTGDFKFDQAASLGYQTDYGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA + SE + + + D++ +A+G ++V +S++SRI+ + Sbjct: 179 AEIGRDGVLALLADSANADSKVQVASEAEVGEEMDDVISDAQGRIIVAAVASNLSRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + + ++L + + + +LI++ G Sbjct: 239 FDAAAKYGRRVVLTGFDVENIVRTAIRLKKLSIADEKLIVKPKDMNRFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPIEGLRKMAIGRHRYVEIKDGDLVYIVTTPSVAKEAVVARVENMIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + + P+ L I GE L AH +LA + G+ + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLMNILSPKYLFPIQGEYRELQAHADLAEEIGMLPENIYIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 ++ L V + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DIMVLSDQGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKILSEDGIFIVVITVNKKKRT 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + V TV D D L+ S+ L L Sbjct: 477 IVSKAKVHTRGF-VYVRKSRDILRESADLVNKTVADYLATEGFDWGELKGSVRDELGKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P V I ++ Sbjct: 536 FDQTKRRPAVLPVIMEV 552 >gi|313890144|ref|ZP_07823779.1| ribonuclease J 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121505|gb|EFR44609.1| ribonuclease J 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 553 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKIIALGGVREYGKNFYLVEI----NDSIFILDAGLKYPENEQLGVDLVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F++H H D GAL L + + VPV+ S I L + +KK Sbjct: 59 KDKVQGVFLSHGHADAIGALPYLLAEVPVPVFGSELTIELAKLFVKSNNATKKFNNFHIV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + HSIPET+ +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSETEIEFRDGLVSFFSTTHSIPETLGMVIGTDRGNIVYTGDFKFDQAAREGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ S NA SE + + ++ +A+G V++ +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSASANATSVVQTASETEVGDEMNQVIGDAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL GS ++ VV AI + ++ ++L + + Y ++LI++ G Sbjct: 239 FDSAAASGRRVVLTGSDVENVVRTAIRLKKLRLTDEKLLIKPKEMSQYEDQELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G R + + D V + E + ++N + + G V Sbjct: 299 MGEPIVSLQKMAIGRHRFANIKKGDLVYIVTTPNVAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M I+P+ L I GE L AH ELA + G+ + V+ G Sbjct: 359 N--LCVSGHANGRDLQLMLNLIKPKYLFPIQGEYRDLAAHAELAEEIGLFPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L + + + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DIMVLNQEGFLHEGAIPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + Q D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNTTVGNYLQQDNFDWGELKGSVRDELSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|303328310|ref|ZP_07358748.1| metallo-beta-lactamase family protein [Desulfovibrio sp. 3_1_syn3] gi|302861640|gb|EFL84576.1| metallo-beta-lactamase family protein [Desulfovibrio sp. 3_1_syn3] Length = 552 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 184/561 (32%), Positives = 290/561 (51%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L PLGG+GEIG+N L+ + +M+DCG+ FP D GVD+V P Sbjct: 1 MNEPYLSITPLGGLGEIGLNCQLWE----TEGGVVMVDCGLMFPDDAHLGVDVVIPHFGA 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIP 119 + + L+ I +TH HEDH GAL L L +Y S F + L+E K + + Sbjct: 57 VSAVKDKLLGIVLTHGHEDHIGALPWLVRELKGTRIYGSRFTLALVEHKLREHEILDWVE 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 AG + +G + V HSIPE L + +PVG +VH+GD+KLD + G TD Sbjct: 117 LCPVDAGTTLPLGDLTFHFFPVCHSIPEGFGLGVETPVGRVVHSGDFKLDPHPLGGSGTD 176 Query: 180 KDSLCAI-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 G EG L+ DSTN MREG ++E+ +K ++ + +AKG +++T FSS + Sbjct: 177 LRLFREFAGPEGARLLLSDSTNVMREGRSLAEREVKDSLGKVFDSAKGRIVITLFSSHIQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVI 297 RI+ + D+A + GR +V+ G SL + +A D+G K F + + P EQL+++ Sbjct: 237 RIQEVFDLARERGRTVVISGKSLANNIEMARDLGFAKLPPSFFNAHNGVPDLPDEQLVLV 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP SAL+++ G R + + E DTV+ SSR IPGN AI + N + G V+ Sbjct: 297 VTGAQGEPLSALSRMVLGGHRQLCIREGDTVVMSSRMIPGNAKAISRLINEMYRLGAEVL 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPP 415 E +H SGH + +L+ M +RP++ V +HGE HLV H LA G+ + Sbjct: 357 YESVHA-IHASGHAHSEELREMLLAVRPELFVPVHGEYQHLVKHGRLAESCGVDPEKIIL 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + +G+ L + PD + D V L DG +G + +RR L G + V +++D+ Sbjct: 416 LEDGQPLSILPDSFRLEDRVPVECTLVDGKGVGDVGSAVLKERRILGDEGMVIVVLVVDS 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ PE++ G ++ + + V+ + R L ++E I S+L Sbjct: 476 ETGSVLHGPEMISKGF-VFEQQYSHLLEDAKCLVLDEIE---AARPGQLTRMQEGIRSSL 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R ++V + P+V I+++ Sbjct: 532 RRFFRRVLERDPVVVPIISEV 552 >gi|308185188|ref|YP_003929321.1| ATP-binding protein [Helicobacter pylori SJM180] gi|308061108|gb|ADO03004.1| ATP-binding protein [Helicobacter pylori SJM180] Length = 692 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 158/555 (28%), Positives = 286/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDVGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAIACGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ +G + ++ + Sbjct: 555 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASLGVFVATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 615 QALLENSQFSSLGLVGF-KDEKHLIKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRK 673 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 674 ALFKKFRKYPAIICH 688 >gi|317011562|gb|ADU85309.1| ribonuclease J [Helicobacter pylori SouthAfrica7] Length = 692 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 159/555 (28%), Positives = 285/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDVGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + ++ + Sbjct: 555 DGDQVEVSPTFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFVATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + V + K L + + +R Sbjct: 615 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLEMLVKSANAEILNNPKKLEDHTRNFMRK 673 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 674 ALFKKFRKYPAIICH 688 >gi|108563780|ref|YP_628096.1| ATP/GTP binding protein [Helicobacter pylori HPAG1] gi|107837553|gb|ABF85422.1| ATP/GTP binding protein [Helicobacter pylori HPAG1] Length = 691 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 159/555 (28%), Positives = 287/555 (51%), Gaps = 11/555 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 139 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 194 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 195 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 254 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 255 KIIEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 314 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 315 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 374 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 375 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 434 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 435 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 494 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 495 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 553 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ VG + ++ + Sbjct: 554 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASVGVFVATIFVNKNK 613 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 614 QALLESSQFSSLGLVGF-KDEKPLMKEIQGGLEVLLRSSNAEILNNPKKLEDHTRNFIRK 672 Query: 537 LLKKVWGKKPLVTVF 551 L K + K P + Sbjct: 673 ALFKKFRKYPAIVCH 687 >gi|109946739|ref|YP_663967.1| hypothetical protein Hac_0114 [Helicobacter acinonychis str. Sheeba] gi|109713960|emb|CAJ98968.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 688 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 160/556 (28%), Positives = 287/556 (51%), Gaps = 11/556 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 136 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 191 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 192 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 251 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 252 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 311 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 312 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 371 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 372 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIETNEVAKYPDNEVLIVTT 431 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R+V + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 432 GSQGETMSALYRMATDEHRHVSIKPNDLVIISAKAIPGNEASVSAVLNFLMKKEAKVAYQ 491 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 492 EFD-NIHVSGHASQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 550 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ VG + ++ + Sbjct: 551 DGDQVEVSPTFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASVGVFVATIFVNKNK 610 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 611 QALLESSQFSSLGLVGF-KDEKHLIKEIQGGLEMLIKSANDEILNNPKKLEDHTRNFMRK 669 Query: 537 LLKKVWGKKPLVTVFI 552 L K + K P + + Sbjct: 670 ALFKKFRKYPAIICHV 685 >gi|116492906|ref|YP_804641.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus pentosaceus ATCC 25745] gi|116103056|gb|ABJ68199.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Pediococcus pentosaceus ATCC 25745] Length = 585 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 146/562 (25%), Positives = 264/562 (46%), Gaps = 13/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + +P GGV E G NM ++DCG+ +P+++L G+D+V PDI++++ Sbjct: 17 SDTIKIIPFGGVRENGKNMYAVQI----HDDIYILDCGLKYPENELLGIDIVIPDISYLV 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCI 121 + ++ ++ +F+TH H D GAL ++VPV+ S I L + + + Sbjct: 73 ENKEKIVGVFLTHGHADAIGALPYFLKEINVPVFGSEMTIALAKITVNDDPELKAFDNFH 132 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D G ++ + H+IPE++ +V+ G IV+TGD+K D A G TD Sbjct: 133 VVDDKKEIDFGDVTVSFFKTTHTIPESLGIVLSCTEGQIVYTGDFKFDQTATDGYQTDFG 192 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++ ++AL+ DS NA +E I + + +K +G V+V + +S++ RI+ Sbjct: 193 RLAQIGSKKVIALLSDSANAENPERSSNETDIADVMAETIKYHEGRVIVASVASNILRIQ 252 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIAT 299 +ID A + +K+VL G L+++V+ AI++ + D+L + E+ I++ T Sbjct: 253 QVIDAAAKSDKKVVLTGHDLEKIVNTAIELNKLNIPDDELIVPLNQLDKLKPEETIILET 312 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G GEP AL +++ + N+K+ D V+ ++ E K+ L G V + Sbjct: 313 GKLGEPIKALQKMAARKKGNLKIQPGDLVVIATNPSHAMETTFAKTKDMLYRAGAEVKSI 372 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +GH +DL+ M I+P+ L+ I GE LVAHKELA Q G+ + Sbjct: 373 SDRAN--ATGHASKDDLQLMLNLIKPEFLIPIQGEYRLLVAHKELAEQVGLNENQIFIAS 430 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL-LDNH 476 G +L + + + G + DG +G ++ + R+ LS G V Sbjct: 431 KGDVLEYKDGEMFLGKGITVGNTMIDGIGVGDIGNIVLRDRKILSEDGVFIAVVTIDRKK 490 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I G Y + + V V + D L++ + L Sbjct: 491 KIIIKEPKITSRGF-VYAKTSVDLIQESSDLVERAVQANLDNKEFDWGHLKQDVRDQLGK 549 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L ++P++ I ++++ Sbjct: 550 FLYDKTKRRPVILPVIMEVNQH 571 >gi|227432387|ref|ZP_03914378.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351853|gb|EEJ42088.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 609 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 144/565 (25%), Positives = 253/565 (44%), Gaps = 17/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + ++D G+ +P+ D GVD+V PD +++K Sbjct: 3 DLSIIPFGGVRENGKNMYAV----TVNDEIFILDAGLKYPETDQLGVDVVVPDFEYLIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + + +F++H H D GAL ++VP++ S I L + + V K Sbjct: 59 TEKIAGVFLSHGHADAIGALPYFLQQVNVPIFGSELTIELAKLAIKDQPVLKDYNDYHII 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G + HSIPE++ +VI + G +V+TGD+K D A TD L Sbjct: 119 NEKSEIDFGNVKVSFFNTTHSIPESLGIVIGTEYGQVVYTGDFKFDQTAESYYRTDIPRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTFSSSVSRIRS 242 +G ILAL+ D+ ++E I I + + N K ++V +S++ RI+ Sbjct: 179 VEVGQGKILALLADAAGTEGGADSVNESKIGDYILETFRDNKKKRIIVAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 IID RK+VL G+ ++ VV AI + ++ QLF+S ++ + +++ Sbjct: 239 IIDATAATKRKLVLSGNDIENVVRTAIKLKKLQLPLPESQLFVSLKNMKSLVAHETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE ++K+ D V ++ E + ++ + +QG V Sbjct: 299 TGRMGEPIKHLNRMANGEDAHIKIGSDDLVFITTTPSTAMESVVAKTRDMIFKQGADVKQ 358 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + + SGH NDL+ M ++P + I GE + A K+ A + + + Sbjct: 359 ISTD--MRSSGHASRNDLQMMLNIMQPAYFMPIQGEYRVMSAAKDAAEEVNLPEDHILMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G +L E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFKLIDGQFELKDSFAIGETLIDGSGIGDIGNVVLRDRRILSEDGVFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSAL 534 + P++ G Y + K + + D L + D L+ + L Sbjct: 477 KRQVVSKPKLTSRGF-VYVKANRDLMKEASDLTVKQIEDYLTNNKSFDWNELKSGVRDVL 535 Query: 535 RSLLKKVWGKKPLVTVFINKISRQR 559 L + ++P+V + ++++ R Sbjct: 536 SRFLFEQTRRRPMVMPVVMEVNQNR 560 >gi|295397814|ref|ZP_06807879.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] gi|294973949|gb|EFG49711.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] Length = 567 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 148/555 (26%), Positives = 258/555 (46%), Gaps = 12/555 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G NM L ++DCG+ +P D+L G+D++ PD T++ + Sbjct: 3 DINIIALGGVRENGKNMYLVE----VDEAIYVLDCGLVYPPDELLGIDMMIPDFTYLKEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +F+TH H D GAL L + VPV+ + I L + + + Sbjct: 59 QDRVAGVFLTHGHADAIGALPYLLKDIQVPVFGTELTIELAKIQTKKIGLKNYQDFHIIS 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +++D G I+ + HS+PE++ + + +P G+IV+TGD+K D TD + Sbjct: 119 EDNEIDFGNVVIKFFKTTHSVPESVGIEVSTPEGSIVYTGDFKFDMTVSDAYKTDFSRIV 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG +G+ AL+ DS A +E I++ + ++NAKG V+V +S++ RI+ ++ Sbjct: 179 EIGRDGVFALLSDSNAAENMKPNATEIEIEQGLLKEVRNAKGRVIVAAVASNLMRIQQVL 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--SDESFGLYPREQLIVIATGSQ 302 D+A ++GR++ L + L+ ++ VAI +G + L + + G + ++I + TG Sbjct: 239 DVASKLGRRVFLDDTELEEIIDVAIRLGKLSIPSKDLITNLKDLGRFEDHEIIFLETGKS 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L +++ V + + D VI + E + KN + G V+ Sbjct: 299 GEPLTTLQKMASSRHTTVSIKDGDKVIIVTTPSYDMEKVVAETKNDVYRAGGEVVELAQA 358 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 SGH P DL+ M ++P+ +V I GE + AHK LA + GI V + G Sbjct: 359 Y--ASSGHASPKDLQLMISLLKPKYVVPISGEYRLMSAHKHLATEVGIPEESVFLLDKGD 416 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 +L I I V L DG +G ++ + RR LS G V + + I Sbjct: 417 ILTYKDGNIHIGGAVPASNVLIDGSGVGDIGNIVLRDRRILSEDGIFLVVLTISRRLGKI 476 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G Y + V+ + + + + L+ I AL L Sbjct: 477 LSGPEIISRGF-IYMKASETLLDESKDLVVEVTEENLKDKNFEWSKLKGDIRDALSKKLY 535 Query: 540 KVWGKKPLVTVFINK 554 ++P++ I + Sbjct: 536 SETQRRPMILPVIME 550 >gi|300173538|ref|YP_003772704.1| ribonuclease J2 [Leuconostoc gasicomitatum LMG 18811] gi|299887917|emb|CBL91885.1| Ribonuclease J2 [Leuconostoc gasicomitatum LMG 18811] Length = 600 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 138/565 (24%), Positives = 249/565 (44%), Gaps = 17/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L +P GGV E G NM + + + D G+ +P+ D GVD+V PD + +K Sbjct: 3 DLSIIPFGGVRENGKNMYAI----TVNDQIFIFDAGLKYPETDQLGVDVVVPDFEYFIKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIPCISF 123 + +F+TH H D GAL + P++ S I L + ++ + Sbjct: 59 SDKIAGVFLTHGHADAIGALPYFLQQVQAPIFGSELTIELAKLAIKDQQALKDYDDYHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++D G ++ HSIPE++ +V+ +P G +V+TGD+K D A TD L Sbjct: 119 NEKTEIDFGQVTVSFFNTTHSIPESLGIVLATPYGQVVYTGDFKFDQTANSYYSTDIARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRS 242 IG +LAL+ D+ E ++E I + I + +N K ++V +S++ RI+ Sbjct: 179 VEIGQGKVLALLADAAGTGSELNSVNESKISEYILETFRENNKKRIIVAAVASNIQRIQQ 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID R++VL G+ ++ VV AI + + +LF++ ++ + +++ Sbjct: 239 VIDATVATKRQLVLSGNDIENVVRTAIRLRKLNLPVPENKLFVNLKNAKNLLASETVILE 298 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ GE V++ E D V ++ E + ++ L +QG V Sbjct: 299 TGRMGEPIKHLNRMANGEDPYVRIGEDDLVFITTTPSTAMESVVAKTRDMLFKQGADVK- 357 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + SGH NDL+ M ++P+ + + GE + K A + I + Sbjct: 358 -QISSDLRSSGHASRNDLQIMINVLKPEYFMPVQGEYRVMTTAKAAAEEVNISEDHIMMA 416 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G + D E+ D G L DG IG ++ + RR LS G V +D Sbjct: 417 MKGDQFKWLKDHFELQDSFTVGETLIDGAGIGDIGNVVLRDRRILSEDGIFVSVVTIDRK 476 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSAL 534 + P++ G Y + K + + + L + D L+ + + Sbjct: 477 KRQVVSKPKLTSRGF-VYVKANRDLMKEASDLTVKQIENYLTTTKSFDWNELKNGVREVV 535 Query: 535 RSLLKKVWGKKPLVTVFINKISRQR 559 L + ++P+V + ++++ R Sbjct: 536 SRYLFEQTRRRPMVMPVVMEVNQNR 560 >gi|215447003|ref|ZP_03433755.1| hypothetical protein MtubT_14107 [Mycobacterium tuberculosis T85] gi|289758879|ref|ZP_06518257.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis T85] gi|289714443|gb|EFD78455.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis T85] Length = 559 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 157/563 (27%), Positives = 269/563 (47%), Gaps = 32/563 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG+ EIG NM ++ + + ++IDCGV FP D PGVDL+ PD+ + Sbjct: 16 LRVTALGGINEIGRNMTVFEHL----GRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRL 71 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ A+ +TH HEDH GA+ L +PV S F + L+ K R++ + Sbjct: 72 DDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPGVRRGPRG 131 Query: 125 A--------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + F + + ++ I I+HTGD K D G Sbjct: 132 PEHPARRVECEYFVRQPFPLRTRGLSRCILGAGT---------ILHTGDIKFDQLPPDGR 182 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 TD + +G+ G+ L+CDSTNA G SE + ++ +++ A G V+V F+S+ Sbjct: 183 PTDLPGMSRLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASN 242 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLI 295 V R++ IID A +GR++ +G S+ R + VA +G ++ D + + +Q++ Sbjct: 243 VDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVV 302 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TG+QGEP SAL+++SRGE R++ L D ++ SS IPGNE A+ + + L + G R Sbjct: 303 LITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGAR 362 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--V 413 V+ + VHVSGH Y +L +Y +RP+ ++ +HG L A+ +LA G+ + Sbjct: 363 VVTNA-QARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESI 421 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG + L I V G DG + G D+ + +R LS G ++V V++ Sbjct: 422 LLAENGVSVDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILS-SGFVAVTVVV 480 Query: 474 DN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 P + G + K + ++ V + L D + + + Sbjct: 481 RRGTGQPLAAPHLHSRGFS----EDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRR 536 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 + + + + ++P++ + ++ Sbjct: 537 TVGKWVGETYRRQPMIVPTVIEV 559 >gi|256850966|ref|ZP_05556355.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260661180|ref|ZP_05862094.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|282934119|ref|ZP_06339397.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] gi|256616028|gb|EEU21216.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260548117|gb|EEX24093.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|281301733|gb|EFA93999.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] Length = 579 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 143/564 (25%), Positives = 260/564 (46%), Gaps = 12/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + + + GV E G +M + + ++D G+ +P L G+D+V PD+ F Sbjct: 1 MADFNIKIMIVSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 K + IF+TH H D GAL + + ++ S I L + + E +K Sbjct: 57 FDKYSDKIAGIFLTHGHADSIGALPYILRRHDINIFGSELTIELAKLEVQRENHRRKNHL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A ++D S+ HSIP ++ +V+ +P G +V+TGD+K D A TD Sbjct: 117 FHVIDAETEIDFRNASVSFFHTTHSIPGSLGIVVHTPAGGVVYTGDFKFDPSASAQYRTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L I +G+LAL+ DS+NA + SEK I + ++ NA G ++V +S+ +R Sbjct: 177 MDRLAEIATKGVLALLSDSSNAEADFPNASEKEIGDYVSEVFSNATGRIIVAAKASNFTR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIA 298 ++ + D A++ RK++L G + ++V +A+ +G ++ D +LF+ + Y QL+V+ Sbjct: 237 LQQVFDAAKKNNRKVLLTGRGVNKIVQIALKLGYLQADSKLFVHSKELKKYKDNQLVVLE 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP +L +++ R V + + D V ++ E + + + G V Sbjct: 297 TGRMGEPLQSLQKMATNRHRMVSIHQGDLVFIATTPSHAVETMVAQTSDMVYRAGGTVT- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 H SGH DL+ + ++P+ L+ + GE L H+ LA+ G+ + Sbjct: 356 -QLAYAKHTSGHATGRDLQLLISTLKPKFLIPVIGEYRLLEIHRNLAIATGMKPKDIYIT 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +NG L L + D V + DG IG ++ + R LS G +D Sbjct: 415 KNGDCLSLQKGRFYLTDPVPGEDTMIDGSGIGDVGNIVLRDREILSDDGIFIAVATIDRK 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y ++ + + + + ++ D L+ + ++L Sbjct: 475 KKKIIAEPKVSSRGF-VYIKANKELMNESREVIKKAITTNFEHKKFDWSELKTDVRNSLE 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V I ++++ R Sbjct: 534 KFLYKQTNRRPVVLPVIMEVNQNR 557 >gi|220909720|ref|YP_002485031.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7425] gi|219866331|gb|ACL46670.1| beta-lactamase domain protein [Cyanothece sp. PCC 7425] Length = 583 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 168/540 (31%), Positives = 281/540 (52%), Gaps = 22/540 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGG+ EIG N ++ + + I++D G++FP D + GV++V PD+T++ + Sbjct: 8 TLKIIPLGGLHEIGKNTCVFEF----EDEIILLDAGLAFPTDGMHGVNIVLPDMTYLRQN 63 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + + +TH HEDH G + +P +Y A+ LL+ K V + + Sbjct: 64 RHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMALLQGKLDEAGVGDRTELRTV 123 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 D V +G F +E +R HSI ++ + I +P+G I+HTGD+K D + G+ D Sbjct: 124 SPRDIVRLGKNFLVEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKFDHTPVDGEFFDIQR 183 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L G +G+L L+ DSTN+ G SE+ + N+ ++G ++VTTF+SSV R+ Sbjct: 184 LAEHGEKGVLCLISDSTNSEVPGYTPSERAVYPNLERCFMQSQGRLIVTTFASSVHRLNM 243 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIATGS 301 ++++A++ GR + ++G S+ V++ A ++G IK D LF + YP Q++++ TGS Sbjct: 244 VLELAQKHGRVVSVVGRSMLNVIAHARNLGYIKCRDDLFQPLHTIHKYPDTQVVILTTGS 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP S L+++SRGE VK+ + DTV+ S+ IPGN +A+ ++ + L+ +G VI Sbjct: 304 QGEPMSGLSRISRGEHPKVKIRQGDTVVLSANPIPGNTIAVVNMIDELMMRGANVIYGK- 362 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 E +HVSGH D K M RP+ + +HGE LV H + A GI + + NG Sbjct: 363 EQGIHVSGHGCQEDQKLMLSLTRPKFFLPVHGEHRMLVKHAKTAQSMGIPADHMVIIDNG 422 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L D I + +V G+ L D I K + +R+QL+ G ++V + + + Sbjct: 423 DVVELSKDSIRTVAKVPAGIELIDRAGIVKAH--VLQERQQLAEDGIITVATTIGSTGRL 480 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESI 530 PE+ G+ + + + V T + D D L+ I Sbjct: 481 LAQPEVHLRGVVTTI-ERPVWQTWMREGVETVLRDRWSSYARANGNGQMDVDWAGLQAQI 539 >gi|319946148|ref|ZP_08020391.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319747677|gb|EFV99927.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 553 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 152/561 (27%), Positives = 260/561 (46%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGGV E G N+ Y + + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--IKLITLGGVRENGKNL----YIAEVNDSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S + L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTVELAKLFVKSNDSVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A ++D G + + HSIPE++ +VI++P GNIV+TGD+K D A TD Sbjct: 115 FHVIDANSEIDFGGTVVSFFQTTHSIPESLGIVIKTPEGNIVYTGDFKFDQTASEFYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE+ + I D + + G V+V +S++SR Sbjct: 175 FARLAEIGREGVLALLSDSANADSTVQVASEQEVGDEILDTIGDWDGRVIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V I + + ++L + + + +LI++ Sbjct: 235 IQQVFDAAAETGRRVVLTGFDVENIVRTGIRLNKLSLANEKLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMVYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M +RP L I GE L AH LA++ GI + Sbjct: 355 --QITQSLRVSGHGNARDLQLMINLLRPNYLFPIQGEYRELDAHARLAMEVGILPENIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGSIMEYDNGDFVPAGSVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + V +V + D L+ ++ +L Sbjct: 473 REKRIISKAKVHTRGF-VYVKKSRDILRESAEIVNQSVEEYLAQDSFDWGELKSAVRDSL 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L ++P + + ++ Sbjct: 532 AKYLFDQTKRRPAILPVVMEV 552 >gi|19746006|ref|NP_607142.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS8232] gi|19748170|gb|AAL97641.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 553 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 147/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKMIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + IF+TH H D GAL L + + PV+ S I L + +KK Sbjct: 59 KGKVQGIFLTHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + R HSIPE+M +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ + +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + + D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|82750876|ref|YP_416617.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] gi|82656407|emb|CAI80826.1| probable metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] Length = 532 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 145/534 (27%), Positives = 261/534 (48%), Gaps = 7/534 (1%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + M+D G+ FP+D++ G+D+V PDI+++++ + L IF+TH HE GA+ Sbjct: 2 YIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVS 61 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + L PVY S I L++ + KK+ + + +I HSI Sbjct: 62 YVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSI 121 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 P+++ + I + G IV+TG++K D D + IG EG+ L+ DST A + G Sbjct: 122 PDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPG 181 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 E I+ ++YD +G ++V+ ++S+ RI+ +++IA ++ RK+ LG SL+ Sbjct: 182 YNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSF 241 Query: 266 SVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++A +G L + YP+ ++I+IATG QGEP AL+Q+++ + + + + E Sbjct: 242 NIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEE 301 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 D+V + A EV I + N LV G +I +H S H +LK M ++ Sbjct: 302 GDSVFLAITASANMEVIIANTLNELVRAGAHII--PNNKKIHASSHGCMEELKMMINIMK 359 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ + + GE +AH +LA + G+ + V G ++ + + ++V G L Sbjct: 360 PEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILI 419 Query: 443 DGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIH 501 DG IG ++ + R L+ G V LD + I PEI G Y + + Sbjct: 420 DGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGF-VYVRESEDLL 478 Query: 502 KLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + V V Q +R + +++++ + LL + ++P++ I++I Sbjct: 479 REAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI 532 >gi|251782660|ref|YP_002996963.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391290|dbj|BAH81749.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127475|gb|ADX24772.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 553 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 145/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKLIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + + IF++H H D GAL L S + PV+ S I L + K Sbjct: 59 KDKVQGIFLSHGHADAIGALPYLLSEVSAPVFGSELTIELAKLFVKGNNNTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE+M +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSETEIEFKDGLVSFFKTTHSIPESMGVVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSANATSNDQIASESEVGEEMDSVIADADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ ++ +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSAVAYGRRVVLTGTDVENIVRTALRLKKLMITDERLLIKPKDMSKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + +PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLINLTKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNEEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TV Q D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNKTVEAYLQKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|228476402|ref|ZP_04061096.1| ribonuclease J 2 [Streptococcus salivarius SK126] gi|228252024|gb|EEK11062.1| ribonuclease J 2 [Streptococcus salivarius SK126] Length = 553 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 147/557 (26%), Positives = 255/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLKYPENEQLGVDFVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + IF+TH H D GAL + + PV+ S I L + V K Sbjct: 59 RDRIQGIFLTHGHADAIGALPYILQEVKAPVFGSSLTIELAKLFVKNAGVKKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 A +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 AETEIEFEDAEVSFFKTTHSIPESMGIVLGTDQGNIVYTGDFKFDQAARPYYKTDLGRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A+G V+V +S++ RI+ + Sbjct: 179 EIGREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADAEGRVIVAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAADHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E + + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAVVARVNNAIYKAGGTVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QSLRVSGHANARELQLMINLLRPQYLFPVQGEYRDLQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILREAADIVNATVENYLAGDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|241896582|ref|ZP_04783878.1| metallo-beta-lactamase superfamily hydrolase [Weissella paramesenteroides ATCC 33313] gi|241870174|gb|EER73925.1| metallo-beta-lactamase superfamily hydrolase [Weissella paramesenteroides ATCC 33313] Length = 632 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 150/564 (26%), Positives = 258/564 (45%), Gaps = 17/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +P GGV E GMNM ++D G+ +P+ DL GVD+V PD ++++ Sbjct: 4 TLDIMPFGGVRENGMNMYAV----TVDEDIFILDAGLKYPESDLLGVDVVIPDYAYLVEH 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISF 123 N+ IF+TH H D GAL L S + VPV+ S I L + A + Sbjct: 60 ADNIAGIFLTHGHADAIGALPYLLSEVQVPVFGSELTIELAKLAINNEASLKDYDDYHIV 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +V G ++ H+IPE++ +VI + VG +V+TGD+KLD A+ TD L Sbjct: 120 RGNSEVRFGNVTVSFFETTHTIPESLGIVIETAVGQVVYTGDFKLDTTALPYYQTDLLRL 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRS 242 IG +G++AL+ D+ GT E + I + K G ++V +S++ RI+ Sbjct: 180 AEIGQKGVVALLADAAGTAHIGTPDHESVLGDYILENFHLHKSGRIIVAAVASNIQRIQQ 239 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIA 298 +ID A ++GRKIV+ G+ L++VV A+ + + ++F+S ++ P ++ +++ Sbjct: 240 VIDAAYKVGRKIVISGNDLEKVVRTALRLKKLILPIPENEMFVSLKNLSKLPADETVILE 299 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP L +++ G+ RN+K+ D V ++ E + ++ L G V Sbjct: 300 TGRMGEPIRHLQRIAHGDDRNIKIQPGDLVFITTTPSTAMEGYVAKTRDMLFRAGAMVKQ 359 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + SGH +D + M ++PQ ++ + GE L A Q G V + Sbjct: 360 ISTDKK--SSGHASKDDFQLMLNLLKPQNVIPVQGEYRVLNEAYRAAEQVGYDDDHVFLL 417 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G LR + + + + DG +G + + RR LS G + +D Sbjct: 418 AKGDKLRWNGEKFYLGGSIQVTSTMIDGSGVGDIGSIVLNDRRILSEDGVFIAVITIDRK 477 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSAL 534 + +I G Y + + V TV + + + D L+ S+ AL Sbjct: 478 KKKVIAPAKIDSRGF-VYVKTSRDLMHEAAELVEQTVAEGVKNTKDFDWGNLKNSVRDAL 536 Query: 535 RSLLKKVWGKKPLVTVFINKISRQ 558 L + +KP++ I + ++ Sbjct: 537 GKFLYEKTRRKPVILPVIMEANQN 560 >gi|322411987|gb|EFY02895.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 553 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 145/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKLIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + + IF++H H D GAL L S + PV+ S I L + K Sbjct: 59 KDKVQGIFLSHGHADAIGALPYLLSEVSAPVFGSELTIELAKLFVKGNNNTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE+M +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSETEIEFKDGLVSFFKTTHSIPESMGVVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSANATSNDQIASESEVGEEMDSVIADADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ ++ +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSAVAYGRRVVLTGTDVENIVRTALRLKKLMITDERLLIKPKDMFKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + +PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLINLTKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNEEGFLHEGSVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TV Q D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNKTVEAYLQKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|238855237|ref|ZP_04645556.1| ribonuclease J 2 [Lactobacillus jensenii 269-3] gi|260664597|ref|ZP_05865449.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|282932470|ref|ZP_06337895.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] gi|238832129|gb|EEQ24447.1| ribonuclease J 2 [Lactobacillus jensenii 269-3] gi|260561662|gb|EEX27634.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|281303419|gb|EFA95596.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] Length = 579 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 143/564 (25%), Positives = 259/564 (45%), Gaps = 12/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + ++ + + GV E G +M + + ++D G+ +P L G+D+V PD+ F Sbjct: 1 MADFDIKIMVVSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 K + IF+TH H D GAL + + ++ S I L + + E +K Sbjct: 57 FDKYSDKIAGIFLTHGHADSIGALPYILRGHDIDIFGSELTIELAKLEVQRENHRRKNHL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A ++D S+ HSIP+++ +V+ +P G IV+TGD+K D A TD Sbjct: 117 FHVIDAETEIDFRNASVSFFHTTHSIPDSLGIVVHTPAGGIVYTGDFKFDPSASEHYRTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L I +G+LAL+ DS+NA + SEK I + ++ NA G ++V +S+ +R Sbjct: 177 MDRLAEIATKGVLALLSDSSNAEADFPNASEKEIGDYVSEVFSNAPGRIIVAAKASNFTR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIA 298 ++ + D A++ RK++L G + ++V +A+ +G ++ D LF+ + Y +QL+V+ Sbjct: 237 LQQVFDAAKKNNRKVLLTGRGVNKIVQIALKLGYLQADSRLFIHSKELKNYKDDQLVVLE 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP +L +++ R V + D V ++ E + + + G V Sbjct: 297 TGRMGEPLQSLQKMATNRHRMVSIHPGDLVFIATTPSHAVETMVAQTSDMVYRAGGTVT- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 H SGH DL+ + ++P+ L+ + GE L H+ LA+ + Sbjct: 356 -QLAYAKHTSGHATGRDLQLLISTLKPKFLIPVIGEYRLLEIHRNLAIATGMKTKDIYIT 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +NG L L + D V + DG IG ++ + R LS G +D Sbjct: 415 KNGDCLSLQKGRFYLTDPVPGEDTMIDGSGIGDVGNIVLRDREILSDDGIFIAVATIDRK 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P + G Y ++ + + ++ + ++ D L+ + ++L Sbjct: 475 KKKIIAEPRVSSRGF-VYIKANKELMNESREVIKKAILTNFEHKKFDWSELKTDVRNSLE 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V I ++++ R Sbjct: 534 KFLYKQTNRRPVVLPVIMEVNQNR 557 >gi|255026998|ref|ZP_05298984.1| hypothetical protein LmonocytFSL_12888 [Listeria monocytogenes FSL J2-003] Length = 516 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 143/509 (28%), Positives = 249/509 (48%), Gaps = 11/509 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++G + + DTV ++ P E + + L + G +V+ + +S Sbjct: 309 LQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFIS 366 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFP 426 GH DLK M ++P+ V +HGE L++H +LA + G+A V V G++L Sbjct: 367 GHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKN 426 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEI 485 D + + V G L DG +G ++ + R+ LS G V V L+ I PEI Sbjct: 427 DKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEI 486 Query: 486 VDIGIPAYDGDGGKIHKLLLKTVITTVVD 514 + G Y + + + K V V Sbjct: 487 ISRGF-IYVRESEHLIEESSKVVTKIVEK 514 >gi|332674194|gb|AEE71011.1| ribonuclease J [Helicobacter pylori 83] Length = 703 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 289/557 (51%), Gaps = 11/557 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 151 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 206 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 207 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 266 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 267 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 326 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 327 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 386 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 387 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 446 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 447 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 506 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 507 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 565 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 566 DGDQVEVGPMFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 625 Query: 478 N-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + + +G+ + D + K + + + + K L + + +R Sbjct: 626 QALLESSQFSSLGLVGF-KDEKHLTKEIQGGLELLLKSSNAEILNNPKKLEDHTHNFIRK 684 Query: 537 LLKKVWGKKPLVTVFIN 553 L K + K P + ++ Sbjct: 685 ALFKKFRKYPAIICHVH 701 >gi|146321340|ref|YP_001201051.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|145692146|gb|ABP92651.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 98HAH33] gi|292558771|gb|ADE31772.1| Beta-lactamase-like: RNA-metabolising metallo-beta-lactamase [Streptococcus suis GZ1] Length = 570 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 151/560 (26%), Positives = 260/560 (46%), Gaps = 13/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + + LGGV E G N+ Y + + ++D G +P+++ GVD+V P+ ++ Sbjct: 17 KMSTIKIMALGGVRENGKNL----YIAEVNEHIFVLDAGAKYPENEQLGVDVVVPNFDYL 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-C 120 + + + +F++H H D GAL L + VPV+ S I L + +KK Sbjct: 73 EENKHRVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLLVKGNNATKKFNDF 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++D G + + HSIPE++ +V+++ GNIV+TGD+K D A TD Sbjct: 133 HVINAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGDFKFDQAADKFYRTDF 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L IGNEG+LAL+ DS NA S + I + + + G V+V +S++ RI Sbjct: 193 GRLAEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIADCDGRVIVAAVASNIVRI 252 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIA 298 + I D AE GR++VL G ++ +V AI + ++ ++L + + Y +LI++ Sbjct: 253 QQIFDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMNKYEDHELIILE 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 313 TGRMGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSISKEAVVARVENLIYKAGGTVK- 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VSGH DL+ M ++P+ L + GE L AH + AL+ G+ + V Sbjct: 372 -SITKNLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQLDAHAKAALEIGMYPENIIIV 430 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 + G ++ V G + DG +G ++ + R+ LS G V + ++ Sbjct: 431 KRGDVMAFEEGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRR 490 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I ++ G Y I + + V TTV + D L+ ++ L Sbjct: 491 EKKIISKAKVNTRGF-VYVKKSKDILREASELVNTTVENYFTKDSFDWAELKSAVRDDLA 549 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L ++P + I ++ Sbjct: 550 KFLFDQTKRRPAILPVIMEV 569 >gi|190570673|ref|YP_001975031.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356945|emb|CAQ54331.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 544 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 199/556 (35%), Positives = 315/556 (56%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN++LY Y KWIMID G+ F + +PGV+L+ D+ F Sbjct: 3 INKNEFLFLPLGGVGRIGMNVSLYHY----QGKWIMIDLGIGFADETMPGVELLIADVDF 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L P+Y + F + L+ K R+ +P Sbjct: 59 IAQRKKDLLGIIITHAHEDHCGAVPHLWEDLQCPIYTTKFTVNFLKEKLKEFRLEGVVPV 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++G F++E + V HSIPE +++I + G+ +HTGDWK D ++G +++ Sbjct: 119 KEVDINGSINLGPFTVEFINVTHSIPEANSILISTEAGSALHTGDWKFDPKPVVGLISNI 178 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L IG++G +LA +CDSTN + + SE I NIY+I+K +K V V+ F+S+V+R Sbjct: 179 ERLKEIGDKGDLLAAICDSTNILSKHDPESESEIYDNIYNIIKRSKKLVAVSLFASNVAR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I A+ + RK+VLLG SL R+V VA D G + FL + +PRE+L+++ T Sbjct: 239 IETISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPEFLEAKEAVNFPREKLVLLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A A+L+ + K+ + DT+IFSS+ IPGNE + N +E GV VI E Sbjct: 299 GCQGEPLAATARLASKSHQAFKMQQGDTMIFSSKIIPGNETRAHNTLNAFIEMGVEVITE 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 E VH SGHP +L+ MY I+P++ + +HGE +H AH + A + G+ + G Sbjct: 359 KTE-NVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTDAHVKFAKECGVKKAIMIAPG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L E + + F DG L+ I R ++ G + V +++ + Sbjct: 418 DIVNLENG--EKVSSIDVDYFGIDGMLLRHPECSVIKMRERMRDAGAIVVTAVVNKKNKL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I + ++K V + P +K +R I S++ S+LK Sbjct: 476 LAKPKVFAPGVFEAQKDAA-IMQKIIKKVESAFDSQP------IKKIRNKIESSIFSILK 528 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 529 EYLLKRPIIEVQIEQV 544 >gi|56808080|ref|ZP_00365874.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pyogenes M49 591] gi|209559336|ref|YP_002285808.1| hypothetical protein Spy49_0801 [Streptococcus pyogenes NZ131] gi|209540537|gb|ACI61113.1| hypothetical protein Spy49_0801 [Streptococcus pyogenes NZ131] Length = 553 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKMIALGGVRECGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + + IF++H H D GAL L + + PV+ S I L + +KK Sbjct: 59 KGKVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + R HSIPE+M +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ + +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + + D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|213019078|ref|ZP_03334885.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995187|gb|EEB55828.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 555 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 199/556 (35%), Positives = 315/556 (56%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN++LY Y KWIMID G+ F + +PGV+L+ D+ F Sbjct: 14 INKNEFLFLPLGGVGRIGMNVSLYHY----QGKWIMIDLGIGFADETMPGVELLIADVDF 69 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L P+Y + F + L+ K R+ +P Sbjct: 70 IAQRKKDLLGIIITHAHEDHCGAVPHLWEDLQCPIYTTKFTVNFLKEKLKEFRLEGVVPV 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++G F++E + V HSIPE +++I + G+ +HTGDWK D ++G +++ Sbjct: 130 KEVDINGSINLGPFTVEFINVTHSIPEANSILISTEAGSALHTGDWKFDPKPVVGLISNI 189 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L IG++G +LA +CDSTN + + SE I NIY+I+K +K V V+ F+S+V+R Sbjct: 190 ERLKEIGDKGDLLAAICDSTNILSKHDPESESEIYDNIYNIIKRSKKLVAVSLFASNVAR 249 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I A+ + RK+VLLG SL R+V VA D G + FL + +PRE+L+++ T Sbjct: 250 IETISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPEFLEAKEAVNFPREKLVLLCT 309 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A A+L+ + K+ + DT+IFSS+ IPGNE + N +E GV VI E Sbjct: 310 GCQGEPLAATARLASKSHQAFKMQQGDTMIFSSKIIPGNETRAHNTLNAFIEMGVEVITE 369 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 E VH SGHP +L+ MY I+P++ + +HGE +H AH + A + G+ + G Sbjct: 370 KTE-NVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTDAHVKFAKECGVKKAIMIAPG 428 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L E + + F DG L+ I R ++ G + V +++ + Sbjct: 429 DIVNLENG--EKVSSIDVDYFGIDGMLLRHPECSVIKMRERMRDAGAIVVTAVVNKKNKL 486 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I + ++K V + P +K +R I S++ S+LK Sbjct: 487 LAKPKVFAPGVFEAQKDAA-IMQKIIKKVESAFDSQP------IKKIRNKIESSIFSILK 539 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 540 EYLLKRPIIEVQIEQV 555 >gi|332522210|ref|ZP_08398462.1| ribonuclease J 2 [Streptococcus porcinus str. Jelinkova 176] gi|332313474|gb|EGJ26459.1| ribonuclease J 2 [Streptococcus porcinus str. Jelinkova 176] Length = 553 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 150/557 (26%), Positives = 260/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKIIALGGVREYGKNFYLVEI----NNSIFILDSGLKYPENEQLGVDLVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F++H H D GAL L + + VPV+ S I L + +KK Sbjct: 59 KDKVQGVFLSHGHADAIGALPYLLAEVPVPVFGSELTIELAKLFVKSNNATKKFNNFHIV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + HSIPET+ +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSETEIEFRDGLVSFFSTTHSIPETLGVVIGTDRGNIVYTGDFKFDQAAREGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ S NA SE + + ++ +A+G V++ +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSASANATSVVQTASETEVGDEMNQVIGDAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL GS ++ VV AI + + ++L + + Y +LIV+ G Sbjct: 239 FDSAAASGRRVVLTGSDVENVVRTAIRLKKLTLIDEKLLIKPKDMSKYEDHELIVLEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP +L +++ G R V + + D V + E + ++N + + G V Sbjct: 299 MGEPIVSLQKMAIGRHRFVNIKKGDLVYIVTTPNVAKEAMVARVENLIYKAGGSV--NLI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M I+P+ L I GE L AH +LA + G+ + V+ G Sbjct: 357 TQNLRVSGHANGRDLQLMLNLIKPKYLFPIQGEYRDLAAHADLAEEIGLFPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L + + + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNQEGFLHEGAIPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKREKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + Q D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNTTVGNYLQQDNFDWGELKGSVRDELSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|220904137|ref|YP_002479449.1| beta-lactamase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868436|gb|ACL48771.1| beta-lactamase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 552 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 178/561 (31%), Positives = 292/561 (52%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L PLGG+GEIG+N L+ +M+DCG+ FP D GVD+V P Sbjct: 1 MKEPYLTITPLGGLGEIGLNCQLWETAGGV----VMVDCGLMFPDDAHLGVDVVIPHFGA 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIP 119 + + L+ I +TH HEDH GAL L L +Y S F + L+E K + + Sbjct: 57 VSAIKDKLLGIVLTHGHEDHIGALPWLVPELKGTRIYGSRFTLALVEHKLREREILDWVE 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A + +G + V HSIPE L + +PVG +VH+GD+K+D + G TD Sbjct: 117 LCPVDARTVLPLGDLTFHFFPVCHSIPEGFGLGVETPVGRVVHSGDFKIDPHPLDGTGTD 176 Query: 180 KDSLCAI-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D G +G L+ DSTN MR+G ++E+ +K ++ I +A+G +++T FSS + Sbjct: 177 LDVFSNFAGPQGARLLLSDSTNVMRDGRSLTEREVKDSLEKIFSSAEGRIVITLFSSHIQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVI 297 RI+ + D+A + GR +V+ G SL + +A D+G K F + + P Q++++ Sbjct: 237 RIQEVFDLAREYGRTVVISGKSLANNIEMARDLGFAKLPPSFFNAHNGVPDLPDNQIVLV 296 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+QGEP SAL+++ G R +++ + DTV+ SSR IPGN A+ + N + G V+ Sbjct: 297 VTGAQGEPLSALSRMVLGGHRQLEVRKGDTVVMSSRMIPGNAKAVAKLINEMYRIGAEVL 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 E +H SGH +L+ M++ +RP++ V +HGE HLV H LA++ G+ V Sbjct: 357 YESVHA-IHASGHAQREELREMFEAVRPELFVPVHGEYQHLVKHGRLAVECGVKEENVVL 415 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + +G+ L L D + +V L DG +G + +RR L G + V +++D+ Sbjct: 416 LEDGQPLTLLEDSFRLEQKVPVECTLVDGKGVGDVGYAVLRERRILGDEGMVIVVLVVDS 475 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ PE++ G ++ + + V+ + R L ++E I S+L Sbjct: 476 ETGSVLHGPEMISKGF-VFEQHYSHLLEDAKCLVLDEIE---AARPGQLNRMQEGIRSSL 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R ++V + P+V I+++ Sbjct: 532 RRFFRRVLERDPVVVPIISEV 552 >gi|331701122|ref|YP_004398081.1| beta-lactamase domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329128465|gb|AEB73018.1| beta-lactamase domain protein [Lactobacillus buchneri NRRL B-30929] Length = 571 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 137/565 (24%), Positives = 259/565 (45%), Gaps = 15/565 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN E+ + +GG E G NM + ++DCG+ +P+++L G+D+V PD ++ Sbjct: 1 MKN-EIKVMAIGGARENGKNMYAV----DINGGIYILDCGLKYPENELLGIDVVIPDFSW 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIP 119 + + + ++ +F+TH H D GA+ S VPV+ S I L + E V Sbjct: 56 LEENKDRIVGVFLTHGHADSIGAISYFLSKFDVPVFGSEMTIELAKINVSDSEEVKHFDD 115 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D + + HSIP ++ + + + G IV+TGD+K D A T+ Sbjct: 116 FHVVSDRSEIDFEDIKVTFFKTTHSIPGSLGIALHTSNGIIVYTGDFKFDQTAAPIYQTN 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +L +G+EG+LAL+ DS+NA SEK I + IYD ++V +S++ R Sbjct: 176 YSALTQLGDEGVLALLDDSSNAENPNPSASEKKIAEYIYDTFNYQNSRIIVAGVASNILR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL---SDESFGLYPREQLIV 296 ++ + + A + GR++ L G L+R+V A+ + +K + L S + +++++ Sbjct: 236 MQQVFNAAARTGRRVYLTGHDLERIVKTAMGLNTLKLPEDDLLISSLDELKKMAPDKVVI 295 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG GEP A+ +++ E ++ + D V ++ E + ++ + V Sbjct: 296 IQTGKMGEPIKAIQRMANKEQSDINIEPGDLVFITTTPSTAMETTVAKTRDMVYRADGEV 355 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 E ++ SG DL+ + + P+ ++ + GE L A+ +LA + G + Sbjct: 356 KMISDE--MNSSGDASQADLQLLMNLLHPKYIIPVQGEYRLLEANAQLAKEIGYTDDQIV 413 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G ++ + D I + V + DG IG ++ + R+ LS G V +D Sbjct: 414 IPAKGDVISISEDDIHLGKGVDLADTMIDGIGIGDIGNIVLRDRKVLSEDGIFVAVVTID 473 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I P++ G Y + K + TV + + + D L++ + Sbjct: 474 RKKKRIVSTPKLTSRGF-VYVKANKDLMKDAAGIIEKTVTNNLEHKEFDWSNLKQDVRED 532 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQ 558 L L K ++P++ I ++++ Sbjct: 533 LSDYLYKQTKRRPVILPVIMEVNQH 557 >gi|123967075|ref|YP_001012156.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9515] gi|123201441|gb|ABM73049.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9515] Length = 667 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 281/558 (50%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ Y I+ID G++FP D + GV++V PD +++ Sbjct: 25 LKIIPLGGLHEIGKNTCVFEY----EDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANL 80 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +TH HEDH G + ++P +Y P AI +L+ K V+ + + + Sbjct: 81 NRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISMLKGKMEEAGVANRTTTQAIK 140 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V +G FS+E +R HSI ++ +L + +PVG + TGD+K D D + + Sbjct: 141 PRQVVRLGQHFSLEFIRNTHSIGDSFSLALTTPVGVVFFTGDFKFDHLPPDKKHADIERM 200 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G++G+L L+ DSTN+ +G SE + N+ I+ AKG V++TTF+SS R+ + Sbjct: 201 AYYGDKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISEAKGRVMLTTFASSTHRVAMV 260 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I +A + GRKI L+G S+ VV ++G IK D LF +S P + +++ TGSQ Sbjct: 261 IQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ 320 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++ R E +VKL DTVIFSS IPGN +++ H +RL++ G +VI E Sbjct: 321 GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVAHSIDRLIKLGAKVIYGK-E 379 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH +D + M I+P+ V +HGE V H + A G+ + + NG Sbjct: 380 HGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGKTAESMGVDPNNILILDNGD 439 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + L D + D V G+ + D + +R+QL+ G ++V + N+ Sbjct: 440 TIELRSDSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQLADDGIVTVLAPISTDGNMV 499 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + P D ++ I Sbjct: 500 APPRVSLRGVVI-SADPRKMSMWTEREINWVLENRWKQLSRQTSPNNFEVDWIGVQREIE 558 Query: 532 SALRSLLKKVWGKKPLVT 549 + L +++ +PL+ Sbjct: 559 NGLTRRMRRELQVEPLIL 576 >gi|21910193|ref|NP_664461.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS315] gi|28896108|ref|NP_802458.1| Zn-dependent hydrolase [Streptococcus pyogenes SSI-1] gi|50914118|ref|YP_060090.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71903391|ref|YP_280194.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|94988492|ref|YP_596593.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94990373|ref|YP_598473.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94992317|ref|YP_600416.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94994295|ref|YP_602393.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|139473848|ref|YP_001128564.1| Zn-dependent hydrolase [Streptococcus pyogenes str. Manfredo] gi|306827462|ref|ZP_07460746.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] gi|21904387|gb|AAM79264.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811358|dbj|BAC64291.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|50903192|gb|AAT86907.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71802486|gb|AAX71839.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|94542000|gb|ABF32049.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94543881|gb|ABF33929.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94545825|gb|ABF35872.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94547803|gb|ABF37849.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|134272095|emb|CAM30339.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|304430342|gb|EFM33367.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] Length = 553 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKMIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + + IF++H H D GAL L + + PV+ S I L + +KK Sbjct: 59 KGKVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + R HSIPE+M +VI + GNIV+TGD+K D A G TD L Sbjct: 119 DSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ + +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + + D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|297205848|ref|ZP_06923243.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] gi|297148974|gb|EFH29272.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] Length = 579 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 143/564 (25%), Positives = 260/564 (46%), Gaps = 12/564 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + + + GV E G +M + + ++D G+ +P L G+D+V PD+ F Sbjct: 1 MADFNIKIMIVSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 K + IF+TH H D GAL + + ++ S I L + + E +K Sbjct: 57 FDKYGDKIAGIFLTHGHADSIGALPYILRGHDINIFGSELTIELAKLEVQRENHRRKNHL 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A ++D S+ HSIP ++ +V+ +P G +V+TGD+K D A TD Sbjct: 117 FHVIDAETEIDFRNASVSFFHTTHSIPGSLGIVVHTPAGGVVYTGDFKFDPSASAQYRTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L I +G+LAL+ DS+NA + SEK I + ++ NA G ++V +S+ +R Sbjct: 177 MDRLAEIATKGVLALLSDSSNAEADFPNASEKEIGDYVSEVFSNATGRIIVAAKASNFTR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIA 298 ++ + D A++ RK++L G + ++V +A+ +G ++ D +LF+ + Y QL+V+ Sbjct: 237 LQQVFDAAKKNNRKVLLTGRGVNKIVQIALKLGYLQADSKLFVHSKELKKYKDNQLVVLE 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP +L +++ R V + + D V ++ E + + + G V Sbjct: 297 TGRMGEPLQSLQKMATNRHRMVSIHQGDLVFIATTPSHAVETMVAQTSDMVYRAGGTVT- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 H SGH DL+ + ++P+ L+ + GE L H+ LA+ G+ + Sbjct: 356 -QLAYAKHTSGHATGRDLQLLISTLKPKFLIPVIGEYRLLEIHRNLAIATGMKPKDIYIT 414 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 +NG L L + D V + DG IG ++ + R LS G +D Sbjct: 415 KNGDCLSLQKGRFYLTDPVPGEDTMIDGSGIGDVGNIVLRDREILSDDGIFIAVATIDRK 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G Y ++ + + + + ++ D L+ + ++L Sbjct: 475 KKKIIAEPKVSSRGF-VYIKANKELMNESREVIKKAITTNFEHKKFDWSELKTDVRNSLE 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K ++P+V I ++++ R Sbjct: 534 KFLYKQTNRRPVVLPVIMEVNQNR 557 >gi|55821196|ref|YP_139638.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55823106|ref|YP_141547.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] gi|55737181|gb|AAV60823.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55739091|gb|AAV62732.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] Length = 553 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 256/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLRYPENEQLGVDFVIPNLDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + IF+TH H D GAL + VPV+ S I L + V+K Sbjct: 59 KDRIQGIFLTHGHADAIGALPYILQDAKVPVFGSSLTIELAKLFVKNAGVNKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLGRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A G V++ +S++ RI+ + Sbjct: 179 EIGQEGVLALLSDSANATSTEQTASEAEVGQEIDQVIADADGRVIIAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAAEHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E A+ + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAAVARVNNAIYKAGGAVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QNLRVSGHANARELQLMLNLLRPQYLFPVQGEYRELQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGTVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILSESADIVNATVENYLAGDSFDWGELKGAVRDEVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|15675021|ref|NP_269195.1| Zn-dependent hydrolase [Streptococcus pyogenes M1 GAS] gi|71910560|ref|YP_282110.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|13622171|gb|AAK33916.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|71853342|gb|AAZ51365.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] Length = 553 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 145/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKMIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + + IF++H H D GAL L + + PV+ S I L + +KK Sbjct: 59 KGKVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + R HSIPE+M +VI + GNI++TGD+K D A G TD L Sbjct: 119 DSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDFKFDQAAREGYQTDLLRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ + +V A+ + + ++L + + + +LI++ G Sbjct: 239 FDSATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L + GE L AH +LA + GI + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L + V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + + D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|322516662|ref|ZP_08069575.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] gi|322124827|gb|EFX96254.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] Length = 553 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 148/557 (26%), Positives = 256/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLKYPENEQLGVDFVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + IF+TH H D GAL + + VPV+ S I L + V K Sbjct: 59 RDRIQGIFLTHGHADAIGALPYILQDVKVPVFGSSLTIELAKLFVKNAGVKKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 A +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 AETEIEFEDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLSRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A+G V+V +S++ RI+ + Sbjct: 179 EIGREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADAEGRVIVAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAADHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E + + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAVVARVNNAIYKAGGTVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QSLRVSGHANARELQLMINLLRPQYLFPVQGEYRDLQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILREAADIVNATVENYLAGDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|312278507|gb|ADQ63164.1| Metallo-beta-lactamase superfamily protein [Streptococcus thermophilus ND03] Length = 553 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 256/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLRYPENEQLGVDFVIPNLDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + IF+TH H D GAL + VPV+ S I L + V+K Sbjct: 59 KDRIQGIFLTHGHADAIGALPYILQDAKVPVFGSSLTIELAKLFVKNAGVNKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLGRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A G V++ +S++ RI+ + Sbjct: 179 EIGREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADADGRVIIAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAAEHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E A+ + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAAVARVNNAIYKAGGAVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QNLRVSGHANARELQLMLNLLRPQYLFPVQGEYRELQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGTVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILSESADIVNATVENYLAGDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|223932550|ref|ZP_03624551.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|253752183|ref|YP_003025324.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253754009|ref|YP_003027150.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253755943|ref|YP_003029083.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|330833129|ref|YP_004401954.1| beta-lactamase domain-containing protein [Streptococcus suis ST3] gi|223898821|gb|EEF65181.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|251816472|emb|CAZ52108.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251818407|emb|CAZ56236.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251820255|emb|CAR46707.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|319758570|gb|ADV70512.1| beta-lactamase domain protein [Streptococcus suis JS14] gi|329307352|gb|AEB81768.1| beta-lactamase domain protein [Streptococcus suis ST3] Length = 553 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 150/557 (26%), Positives = 259/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + + LGGV E G N+ Y + + ++D G +P+++ GVD+V P+ ++ + Sbjct: 3 TIKIMALGGVRENGKNL----YIAEVNEHIFVLDAGAKYPENEQLGVDVVVPNFDYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + + +F++H H D GAL L + VPV+ S I L + +KK Sbjct: 59 KHRVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLLVKGNNATKKFNDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A ++D G + + HSIPE++ +V+++ GNIV+TGD+K D A TD L Sbjct: 119 NAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGDFKFDQAADKFYRTDFGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IGNEG+LAL+ DS NA S + I + + + G V+V +S++ RI+ I Sbjct: 179 AEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIADCDGRVIVAAVASNIVRIQQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIATGS 301 D AE GR++VL G ++ +V AI + ++ ++L + + Y +LI++ TG Sbjct: 239 FDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMNKYEDHELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSISKEAVVARVENLIYKAGGTVK--SI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M ++P+ L + GE L AH + AL+ G+ + V+ G Sbjct: 357 TKNLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQLDAHAKAALEIGMYPENIIIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ V G + DG +G ++ + R+ LS G V + ++ Sbjct: 417 DVMAFEEGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + D L+ ++ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSKDILREASELVNTTVENYFTKDSFDWAELKSAVRDDLAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + I ++ Sbjct: 536 FDQTKRRPAILPVIMEV 552 >gi|312862837|ref|ZP_07723077.1| ribonuclease J 2 [Streptococcus vestibularis F0396] gi|311101697|gb|EFQ59900.1| ribonuclease J 2 [Streptococcus vestibularis F0396] Length = 553 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 147/557 (26%), Positives = 255/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLKYPENEQLGVDFVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + IF+TH H D GAL + + PV+ S I L + V K Sbjct: 59 RDRIQGIFLTHGHADAIGALPYILQDVKAPVFGSSLTIELAKLFVKNAGVKKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 A +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 AETEIEFEDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLSRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A+G V+V +S++ RI+ + Sbjct: 179 EIGREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADAEGRVIVAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAADHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E + + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAVVARVNNAIYKAGGTVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QSLRVSGHANARELQLMINLLRPQYLFPVQGEYRDLQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILREAADIVNATVENYLAGDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|116627921|ref|YP_820540.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus thermophilus LMD-9] gi|116101198|gb|ABJ66344.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus thermophilus LMD-9] Length = 553 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 257/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVEI----NDSIFILDAGLRYPENEQLGVDFVIPNLDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + IF+TH H D GAL + VPV+ S I L + V+K Sbjct: 59 KDRIQGIFLTHGHADAIGALPYILQDAKVPVFGSSLTIELAKLFVKNAGVNKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +++ + + HSIPE+M +V+ + GNIV+TGD+K D A TD L Sbjct: 119 SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLGRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + + I ++ +A G V++ +S++ RI+ + Sbjct: 179 EIGREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADADGRVIIAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A + GR++VL G ++ +V AI + + + ++L + + + +LI++ G Sbjct: 239 DSAAEHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ + D V + E A+ + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAAVARVNNAIYKAGGAVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L + GE L AH ELAL+ GI + V+ G Sbjct: 357 QNLRVSGHANARELQLMLNLLRPQYLFPVQGEYRELQAHAELALEVGILPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D + V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLLEGTVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILSESADIVNATVENYLAGDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|293400830|ref|ZP_06644975.1| metallo-beta-lactamase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305856|gb|EFE47100.1| metallo-beta-lactamase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 624 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 166/552 (30%), Positives = 270/552 (48%), Gaps = 13/552 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 +GG+GE+G NM + + + ++ID GV FP+DDL GVD V PD +++K + Sbjct: 48 IYAMGGLGEVGKNMYCFEH----ENEILIIDSGVRFPEDDLLGVDYVIPDYNYLVKNNRK 103 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + ITH HEDH G + L + + +YA FA+ L+ K ++ + + + Sbjct: 104 RKILIITHGHEDHIGGIPFLLKSVDIEAIYAPAFAVALINKKLEERKMLRGVKIVEINDR 163 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 V + F+ HSIP+++ ++I +P G IV TGD+K D + D + + Sbjct: 164 SSVKMQHFTCGFFNTTHSIPDSLGILINTPNGRIVETGDFKFDLTPVGS-NADYQVMAYM 222 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G G+ LM DSTN+ ISEK + I D MK G ++V TF+S+V R+ I++ Sbjct: 223 GQIGVDLLMSDSTNSGVADFSISEKKVAAEILDTMKKTDGRLIVVTFASNVYRVSQILEA 282 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GRK+++ G S++ VV++ +G IK ++ FL E P + ++ TGSQGEP Sbjct: 283 AVACGRKVIIFGRSMENVVTIGRKMGKIKVGEEHFLKPEQLSHTPASKTCIVCTGSQGEP 342 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL++++ G R +KL DTVIFSS IPGN ++ + N+L + G V+ + + Sbjct: 343 LAALSRIANGTHRFIKLIPGDTVIFSSSPIPGNGASVNQVVNKLFKAGANVLTKSILGNL 402 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H +GH + K M Q I+P+ + +HGE L HKE A++ GI + NG +L Sbjct: 403 HTTGHASQEEQKLMLQLIKPKYFMPVHGEYKMLKQHKETAMETGIPEENIFTCANGDVLI 462 Query: 424 LFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFG 481 L + + DG I + + R+ L+ G ++ + +D + Sbjct: 463 LRNHHVYESSFRIAADDIYVDGNDISGVSTAVLKDRKILADNGLVAAIIAIDSKENKVLC 522 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P IV G + D + K V + + +R L+ + S L L Sbjct: 523 KPVIVSRGF-VFIKDSQGLLKEAEMIVYDALKE-KMKQRTTFSDLKNCVRSTLEPFLYNK 580 Query: 542 WGKKPLVTVFIN 553 + P+V I Sbjct: 581 THRNPIVIPVII 592 >gi|15673600|ref|NP_267774.1| hypothetical protein L61727 [Lactococcus lactis subsp. lactis Il1403] gi|12724626|gb|AAK05716.1|AE006392_2 hypothetical protein L61727 [Lactococcus lactis subsp. lactis Il1403] gi|326407083|gb|ADZ64154.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis CV56] Length = 570 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 252/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + PLGGV E G NM L + ++D G+ + + D GVD V PDIT+ Sbjct: 1 MSN--IKITPLGGVREFGKNMYLVE----VEEQIFVLDAGLKYAEMDQLGVDFVIPDITY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 +++ + IF+TH H D GAL + S L VPV+ S I L + S+K Sbjct: 55 LLENADRVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G I H+IPE++ +VI + GNIV+TGD++ D G T+ Sbjct: 115 FHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDFRFDPAVAKGYRTN 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IGN G+LAL+ S NA+ SE I + IYD + + +G V++ + ++ R Sbjct: 175 MRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ ID A ++GR++ G + +++ A + ++ + + Y +L+++ Sbjct: 235 IQQTIDAAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP +L ++ + VK+ + D V+ + E I I+N + + G + Sbjct: 295 ETGRMGEPLKSLGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 ++ + SGH DL+ + RP+ L+ I GE L AH +LA++ I + Sbjct: 355 MLASDLKI--SGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + G+ + L + + + DG +G + + R+ LS G + + Sbjct: 413 AKRGETVSLENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISK 472 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y + + + V TV + D ++ SI AL Sbjct: 473 TERKIVSKSRVHTRGF-VYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDAL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L + +KP++ + + Sbjct: 532 GKFLYEQTKRKPVILPVVME 551 >gi|58337150|ref|YP_193735.1| hypothetical protein LBA0843 [Lactobacillus acidophilus NCFM] gi|227903726|ref|ZP_04021531.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus acidophilus ATCC 4796] gi|58254467|gb|AAV42704.1| hypothetical protein LBA0843 [Lactobacillus acidophilus NCFM] gi|227868613|gb|EEJ76034.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus acidophilus ATCC 4796] Length = 585 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 135/563 (23%), Positives = 264/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IFITH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFITHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGVDVHTPAGEIVYTGDFKFDPTATKNYHTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I + ++ +NA G ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASFPNASEQDIGNFVTNVFRNATGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + + L + + P +Q +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPEGLLMRVKDLKTVPDDQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAQKRHSMITIQKGDLVFIATTPSHSVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 +H SGH D++ + ++P+ L+ + GE L ++LA++ G+ + +NG Sbjct: 359 N--IHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRDLAIKTGMDPKNIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKRKRFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFVAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ + + + + + ++ D L++ I S L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMSESIDVIKKAINNNFEHKKFDWTELKQDIRSDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|322387145|ref|ZP_08060755.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321141674|gb|EFX37169.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 553 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 149/555 (26%), Positives = 250/555 (45%), Gaps = 13/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGV E G NM + + ++D G+ +P+++ GVD+V P++ ++ + Sbjct: 4 IKLTTLGGVRENGKNMYIAEI----NDSIFVLDAGLKYPENEQLGVDVVIPNMEYLFENS 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISFQ 124 + +F+TH H D GAL L S + VPV+ S I L + +KK Sbjct: 60 DRIAGVFLTHGHADAIGALPYLLSEVKVPVFGSELTIELAKLFVKGNDSAKKFDDFHVID 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD L Sbjct: 120 ENTEIDFGGTEVSFFRTTHSIPESLGVVLKTSEGSIVYTGDFKFDQTASESYATDFGRLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + I + + G ++V +S++SRI+ + Sbjct: 180 EIGREGVLALLSDSANADSNIQVASESEVGDEITQTISDWDGRIIVAAVASNLSRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + + L + + + +LI++ TG Sbjct: 240 DAAADTGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIILETGRM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 300 GEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMVYQAGGVVK--PIT 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH DL+ M ++PQ L I GE L AH + A+ G+ + + G Sbjct: 358 QSLRVSGHGNARDLQLMINLLQPQYLFPIQGEYRELDAHAKAAMAVGLLPERIFIPKKGT 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 + V G L DG IG ++ + R+ LS G V + ++ I Sbjct: 418 TMSYEHGDFVPSGAVAAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + G Y I + + V TV D Q D L+ + L L Sbjct: 478 IAKARVHTRGF-VYLKKSRDILRESTELVNQTVEDYLQGEDFDWADLKGKVRDNLAKFLF 536 Query: 540 KVWGKKPLVTVFINK 554 + ++P + + + Sbjct: 537 EQTKRRPAILPVVME 551 >gi|325912857|ref|ZP_08175235.1| hypothetical protein HMPREF0523_1218 [Lactobacillus iners UPII 60-B] gi|325477850|gb|EGC80984.1| hypothetical protein HMPREF0523_1218 [Lactobacillus iners UPII 60-B] Length = 612 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKSLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|171779746|ref|ZP_02920702.1| hypothetical protein STRINF_01583 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281848|gb|EDT47282.1| hypothetical protein STRINF_01583 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 553 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 143/557 (25%), Positives = 264/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDEVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISF 123 +K + IF+TH H D GAL + PV+ SP I L + + V K Sbjct: 59 KKRVQGIFLTHGHADAIGALPYILQEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ +I + HS+PE++ +V+ + GNIV+TGD+K D A TD L Sbjct: 119 DAETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA + SE + + + +A+G V++ +S++ RI+ + Sbjct: 179 TEIGREGVLALLSDSANATSQVMTASEAEVAAEMDSAIADAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G + +V AI + ++ ++L + + Y +LI++ G Sbjct: 239 FDSAAEYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIIKPKDMHKYEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R +++ + D V + E A+ ++N + + G V Sbjct: 299 MGEPINGLHKMALGRHRYIQIKDGDLVYIVTTPSLSKEAAVARVENLIYKAGGTV--NLI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 ++VSGH DL+ M ++P+ L + GE +L AH ELA + G+ + V+ G Sbjct: 357 TKTLNVSGHANGRDLQLMLNLLQPKYLFPVQGEYRNLAAHAELAQEVGMYPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L + V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DVMVLGKNGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y I + + V TV + + D L+ ++ + L Sbjct: 477 IISKAKIHTRGF-VYVKKSRDILRESAELVNQTVENYLKQDSFDWGELKGAVRDEVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|42519956|ref|NP_965871.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409693|gb|AAS13805.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 544 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 201/556 (36%), Positives = 316/556 (56%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN++LY Y KWIMID GV F + +PGV+L+ DI F Sbjct: 3 INKNEFLFLPLGGVGRIGMNVSLYHY----QGKWIMIDLGVGFADETMPGVELLIADIDF 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L +Y + F + L+ K R+ +P Sbjct: 59 IAQRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPV 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++G F++E + V HSIPE +++I + +G+ +HTGDWK D ++G ++ Sbjct: 119 KEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNM 178 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L IG++G +LA +CDSTN + + SE I NIY+I+K +K V V+ F+S+V+R Sbjct: 179 ERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVAR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I A+ + RK+VLLG SL R+V VA D G + FL + +PRE+L+++ T Sbjct: 239 IETISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A A+L+ + K+ + DT+IFSS+ IPGNE ++ N +E GV VI E Sbjct: 299 GCQGEPLAATARLAAKNHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITE 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 E VH SGHP +LK MY I+P++ + +HGE +H AH + A + G+A + G Sbjct: 359 KTEH-VHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L +D + F DG L+ I R+++ G + V +++ + Sbjct: 418 DIVNLENGG--KVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I K++ K V + P + ++ I S++ S+LK Sbjct: 476 LAKPKVFVPGVFEVLEDAATIQKIVKK-VESLFSLQPTKK------IKNKIESSILSILK 528 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 529 EYLLKRPIIEVQIEQV 544 >gi|281492194|ref|YP_003354174.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] gi|281375865|gb|ADA65359.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] Length = 570 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 252/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + PLGGV E G NM L + ++D G+ + + D GVD V PDIT+ Sbjct: 1 MSN--IKITPLGGVREFGKNMYLVE----VEEQIFVLDAGLKYAEMDQLGVDFVIPDITY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 +++ + IF+TH H D GAL + S L VPV+ S I L + S+K Sbjct: 55 LLENADRVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G I H+IPE++ +VI + GNIV+TGD++ D G T+ Sbjct: 115 FHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDFRFDPAVAKGYRTN 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IGN G+LAL+ S NA+ SE I + IYD + + +G V++ + ++ R Sbjct: 175 MRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ ID A ++GR+I G + +++ A + ++ + + Y +L+++ Sbjct: 235 IQQTIDAAIKLGRRIAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP +L ++ + VK+ + D V+ + E I I+N + + G + Sbjct: 295 ETGRMGEPLKSLGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 ++ + SGH DL+ + RP+ L+ I GE L AH +LA++ I + Sbjct: 355 MLASDLKI--SGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMNILPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + G+ + L + + + DG +G + + R+ LS G + + Sbjct: 413 AKRGETVSLENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISK 472 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y + + + V TV + D ++ SI AL Sbjct: 473 TERKIVSKSRVHTRGF-VYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDAL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L + +KP++ + + Sbjct: 532 GKFLYEQTKRKPVILPVVME 551 >gi|225629903|ref|YP_002726694.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Wolbachia sp. wRi] gi|225591884|gb|ACN94903.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Wolbachia sp. wRi] Length = 544 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 202/556 (36%), Positives = 317/556 (57%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN++LY Y KWIMID GV F + +PGV+L+ DI F Sbjct: 3 INKNEFLFLPLGGVGRIGMNVSLYHY----QGKWIMIDLGVGFADETMPGVELLIADIDF 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L +Y + F + L+ K R+ +P Sbjct: 59 IAQRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPV 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++G F++E + V HSIPE +++I + +G+ +HTGDWK D ++G ++ Sbjct: 119 KEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNM 178 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L IG++G +LA +CDSTN + + SE I NIY+I+K +K V V+ F+S+V+R Sbjct: 179 ERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVAR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I A+ + RK+VLLG SL R+V VA D G + FL + +PRE+L+++ T Sbjct: 239 IETISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A A+L+ + K+ + DT+IFSS+ IPGNE ++ N +E GV VI E Sbjct: 299 GCQGEPLAATARLAAKSHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITE 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 E VH SGHP +LK MY I+P++ + +HGE +H AH + A + G+A + G Sbjct: 359 KTEH-VHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L E +D + F DG L+ I R+++ G + V +++ + Sbjct: 418 DIVNLENG--EKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I K++ K V + P + ++ I S++ S+LK Sbjct: 476 LAKPKVFVPGVFEVLEDAATIQKIVKK-VESLFSLQPTKK------IKNKIESSILSILK 528 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 529 EYLLKRPIIEVQIEQV 544 >gi|310819554|ref|YP_003951912.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|309392626|gb|ADO70085.1| Metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 546 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 288/555 (51%), Gaps = 15/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+GEIG+N + + ++ID G+ FP + PG+D+V PD + + + Sbjct: 2 LHVIPLGGLGEIGLNAMVL----ACRGEMLLIDAGLMFPTVEAPGIDIVIPDFSHLKQHA 57 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 I +TH HEDH GAL L L VPVY + + + + + V + I Sbjct: 58 SQFRGIVLTHGHEDHMGALPYLLDDLPVPVYGTRYTLAMARNRLDELGVIADLREIE--P 115 Query: 126 GDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 VG+ F++E+ RV H++P+ + ++R+P G ++HTGD+KLD D I G TD + Sbjct: 116 RTPFPVGSVFTVEASRVTHTVPDAVGYIVRTPEGTVIHTGDFKLDPDPIDGLRTDLERWG 175 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G G+L L+ DSTN+ SE+ ++ + + A+G ++V F+S++ R+R+++ Sbjct: 176 EEGERGVLCLLSDSTNSEVTQETGSERVVEHAFERLFREAQGRIVVALFASNLHRVRTVL 235 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 +AEQ+GR++ L G S+ R V +A +G + + LF+ E+ ++++++TG+QG Sbjct: 236 KLAEQLGRRVALQGRSMTRNVEMARQLGYLDVPESLFIPLEAVPSLAPGRVVLLSTGAQG 295 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+ LAQL+ G+ V+L D V+ S+R IPGNE ++G + ++L G R++ E Sbjct: 296 EARAGLAQLAAGKGP-VRLGPGDMVVLSARPIPGNERSVGALLDQLQWTGARLVYAQVEP 354 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RNGKM 421 +HVSGH +R+ +RPQ + +HGE HL H A + G+ + R+G + Sbjct: 355 DIHVSGHASQPQQRRVLDLVRPQHFIPVHGEMRHLHRHLATARESGLTPEQLLLARDGDL 414 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + +V G KD + G + +R +L+ G + ++D + Sbjct: 415 ISFEEGRGRFAGQVPTGRIHKDLYSGGVVTPEALQERTRLAETGMVVAVAVIDRASLALM 474 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ G+ D + + + T + L R D L+RE ++ ++R K Sbjct: 475 AGPQLSGQGLSL---DEQAMLPRVAEEARTLFLQLSPQLRGDDALVREELTRSVRRAFKL 531 Query: 541 VWGKKPLVTVFINKI 555 K+PLV + K+ Sbjct: 532 FTPKRPLVVPMVVKV 546 >gi|320546522|ref|ZP_08040837.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320448907|gb|EFW89635.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 553 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 145/557 (26%), Positives = 263/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYVVE----VNDSIFVLDAGLRYPENEQLGVDEVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIPCISF 123 +K + IF+TH H D GAL + S PV+ SP I L + V K Sbjct: 59 KKRVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKNSTNVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ +I + HS+PE++ +V+ + GNIV+TGD+K D A TD L Sbjct: 119 DAETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + +A+G V++ +S++ RI+ + Sbjct: 179 TEIGREGVLALLSDSANATSHVMTASEAEVAAEMDSAIADAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G + +V AI + ++ ++L + + Y +LI++ G Sbjct: 239 FDSAAEYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIIKPKDMHKYEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E A+ ++N + + G V Sbjct: 299 MGEPINGLHKMALGRHRYVQIKDGDLVYIVTTPSLSKEAAVARVENLIYKAGGIV--HLI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 ++VSGH DL+ M ++P+ L + GE +L AH ELA + G+ + V+ G Sbjct: 357 SQSLNVSGHANARDLQLMLNLLQPKYLFPVQGEYRNLAAHAELAEEVGMYPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L + V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DVMVLGKNGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y I + + V TV + + D L+ ++ + L Sbjct: 477 IVSKAKIHTRGF-VYVKKSRDILRESAELVNQTVENYLEQENFDWGELKGAVRDEVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|125623720|ref|YP_001032203.1| metallo-beta-lactamase superfamily protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492528|emb|CAL97471.1| metallo-beta-lactamase superfamily protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070489|gb|ADJ59889.1| metallo-beta-lactamase superfamily protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 570 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 252/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + PLGGV E G NM L + ++D G+ + + D GVD V PDIT+ Sbjct: 1 MSN--IKITPLGGVREFGKNMYLVE----VEEQIFVLDAGLKYAEMDQLGVDFVIPDITY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 +++ + IF+TH H D GAL + S L VPV+ S I L + S+K Sbjct: 55 LLENADRVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G I H+IPE++ +VI + GNIV+TGD++ D G T+ Sbjct: 115 FHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTTDGNIVYTGDFRFDPAVAKGYRTN 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IGN G+LAL+ S NA+ SE I + IYD + + +G V++ + ++ R Sbjct: 175 MRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDHIDDNEGRVIIACNAGNLGR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ ID A ++GR++ G + +++ A + ++ + + + +L+++ Sbjct: 235 IQQTIDAAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKFADNELVIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP AL ++ + VK+ + D V+ + E I I+N + + G + Sbjct: 295 ETGRMGEPLKALGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 ++ + SGH DL+ + RP+ L+ I GE L AH +LA++ I + Sbjct: 355 MLASDLKI--SGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + G+ + L + + + DG +G + + R+ LS G + + Sbjct: 413 AKRGETVSLENGDMVPAGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISK 472 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y + + + V TV + D ++ SI AL Sbjct: 473 TERKIVSKSRVHTRGF-VYVKTSRDLMREAGELVNETVDKYLAGKEFDWAEIKGSIRDAL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L + +KP++ + + Sbjct: 532 GKFLYEQTKRKPVILPVVME 551 >gi|146319134|ref|YP_001198846.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|145689940|gb|ABP90446.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 05ZYH33] Length = 570 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 151/560 (26%), Positives = 260/560 (46%), Gaps = 13/560 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + + LGGV E G N+ Y + + ++D G +P+++ GVD+V P+ ++ Sbjct: 17 KMSTIKIMALGGVRENGKNL----YIAEVNEHIFVLDAGAKYPENEQLGVDVVVPNFDYL 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-C 120 + + + +F++H H D GAL L + VPV+ S I L + +KK Sbjct: 73 EENKHRVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLLVKGNNATKKFNDF 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 A ++D G + + HSIPE++ +V+++ GNIV+TGD+KL A TD Sbjct: 133 HVINAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGDFKLTQAADKFYRTDF 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L IGNEG+LAL+ DS NA S + I + + + G V+V +S++ RI Sbjct: 193 GRLAEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIADCDGRVIVAAVASNIVRI 252 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIA 298 + I D AE GR++VL G ++ +V AI + ++ ++L + + Y +LI++ Sbjct: 253 QQIFDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMNKYEDHELIILE 312 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 313 TGRMGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSISKEAVVARVENLIYKAGGTVK- 371 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + VSGH DL+ M ++P+ L + GE L AH + AL+ G+ + V Sbjct: 372 -SITKNLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQLDAHAKAALEIGMYPENIIIV 430 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 + G ++ V G + DG +G ++ + R+ LS G V + ++ Sbjct: 431 KRGDVMAFEEGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRR 490 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I ++ G Y I + + V TTV + D L+ ++ L Sbjct: 491 EKKIISKAKVNTRGF-VYVKKSKDILREASELVNTTVENYFTKDSFDWAELKSAVRDDLA 549 Query: 536 SLLKKVWGKKPLVTVFINKI 555 L ++P + I ++ Sbjct: 550 KFLFDQTKRRPAILPVIMEV 569 >gi|307706139|ref|ZP_07642958.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307618539|gb|EFN97687.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] Length = 553 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 148/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWDGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A+ GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAADATGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ C+ Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPECIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGSVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|322372824|ref|ZP_08047360.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] gi|321277866|gb|EFX54935.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] Length = 553 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 254/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P++ ++++ Sbjct: 3 DIKIIALGGVRENAKNLYIVE----VNDSIFILDAGLKYPENEQLGVDFVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + IF+TH H D GAL + + PV+ S I L + V K Sbjct: 59 RDRIQGIFLTHGHADAIGALPYILQEVKAPVFGSSLTIELAKLFVKNAGVKKFNNFHVID 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 A +++ + + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 AETEIEFEDAVVSFFKTTHSIPESMGVVIGTDQGNIVYTGDFKFDQAARPYYKTDLGRLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG +G+LAL+ DS NA SE + + + ++ +A+G V++ +S++ RI+ + Sbjct: 179 EIGRDGVLALLSDSANATSTEQTASEAEVGQEMDHVIADAEGRVIIAAVASNLVRIQQVF 238 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + ++L + + + +LI++ G Sbjct: 239 DSAADHGRRVVLTGFDVENIVRTAIRLKKLTVNHEKLIVKPKDMDKFEDHELIILENGRM 298 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP L +++ G R V++ E D V + E + + N + + G V Sbjct: 299 GEPIDGLQKMAVGRHRYVQIKEGDLVYIVTTPSIAKEAIVARVNNAIYKAGGSVK--MIT 356 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH +L+ M +RPQ L I GE L AH ELAL+ G+ + V+ G Sbjct: 357 QSLRVSGHANARELQLMINLLRPQYLFPIQGEYRDLQAHAELALEVGLLPENIYIVKRGD 416 Query: 421 MLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 IMHLSEDQGFLHEGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + V TV + D L+ ++ + L Sbjct: 477 IVSKARVNTRGF-VYVKKSRDILRESADIVNATVENYLAGDSFDWGELKSAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|116512429|ref|YP_809645.1| metallo-beta-lactamase superfamily hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|116108083|gb|ABJ73223.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactococcus lactis subsp. cremoris SK11] Length = 570 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 252/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + PLGGV E G NM L + ++D G+ + + D GVD V PDIT+ Sbjct: 1 MSN--IKITPLGGVREFGKNMYLVE----VEEQIFVLDAGLKYAEMDQLGVDFVIPDITY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 +++ + IF+TH H D GAL + S L VPV+ S I L + S+K Sbjct: 55 LLENADRVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G I H+IPE++ +VI + GNIV+TGD++ D G T+ Sbjct: 115 FHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTTDGNIVYTGDFRFDPAVAKGYRTN 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IGN G+LAL+ S NA+ SE I + IYD + + +G V++ + ++ R Sbjct: 175 MRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDHIDDNEGRVIIACNAGNLGR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ ID A ++GR++ G + +++ A + ++ + + + +L+++ Sbjct: 235 IQQTIDAAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKFADNELVIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP AL ++ + VK+ + D V+ + E I I+N + + G + Sbjct: 295 ETGRMGEPLKALGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 ++ + SGH DL+ + RP+ L+ I GE L AH +LA++ I + Sbjct: 355 MLASDLKI--SGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + G+ + L + + + DG +G + + R+ LS G + + Sbjct: 413 AKCGETVSLENGDMVPAGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISK 472 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y + + + V TV + D ++ SI AL Sbjct: 473 TERKIVSKSRVHTRGF-VYVKTSRDLMREAGELVNETVDKYLAGKEFDWAEIKGSIRDAL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L + +KP++ + + Sbjct: 532 GKFLYEQTKRKPVILPVVME 551 >gi|306825701|ref|ZP_07459040.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432062|gb|EFM35039.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 553 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 251/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DNSIFVLDAGLKYPENEQLGVDVVIPNMEY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++P GNIV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFRTTHSIPESLGVVLKTPKGNIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWDGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A + GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAAETGRRVVLTGFDVENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSVGRHRYVEIKDGDLVYIVTTPSTAKEAVVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTIMSYEHGDFVPAGAVSAGDVMIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-IYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|306831137|ref|ZP_07464298.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978037|ref|YP_004287753.1| Metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426703|gb|EFM29814.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177965|emb|CBZ48009.1| Metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 553 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 147/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P+I ++++ Sbjct: 3 DIKIIALGGVRENAKNLYVVE----VNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISF 123 +K + IF+TH H D GAL + S PV+ SP I L + + V K Sbjct: 59 KKRVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ +I + HS+PE++ +V+ + GNIV+TGD+K D A TD L Sbjct: 119 DAETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + I+ +A+G V++ +S++ RI+ + Sbjct: 179 TEIGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G + +V AI + ++ ++L + + + +LI++ G Sbjct: 239 FDSAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ E D V + E A+ ++N + + G V Sbjct: 299 MGEPINGLQKMALGRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVK--LI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 ++VSGH DL+ M ++P+ L + GE +L H ELA + G+ + V+ G Sbjct: 357 TQTMNVSGHANARDLQLMINLLQPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DVMVLGKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y I + + V TV + D L+ ++ + L Sbjct: 477 IVSKAKIHTRGF-VYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|323466771|gb|ADX70458.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus H10] Length = 585 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 135/563 (23%), Positives = 262/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEAQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAADNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I + ++ +NA G ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASYPNASEQDIGNFVTNVFRNATGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P Q +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPDNQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHDGDLVFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +H SGH D++ + ++P+ L+ + GE L + LA++ G+ + +NG Sbjct: 359 N--MHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRSLAIKTGMSPKNIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKRFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + ++ D L++ I S L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANKQLMNDSIEVIKKAINSNFEHKKFDWTELKQDIRSDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|270293184|ref|ZP_06199395.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] gi|270279163|gb|EFA25009.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] Length = 553 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 149/560 (26%), Positives = 252/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++P G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTPKGSIVYTGDFKFDQTASKSYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGREGVLALLSDSANADSNIQVASESEVGEEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDVENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ C+ Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPECIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGGVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|260101778|ref|ZP_05752015.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|260084422|gb|EEW68542.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] Length = 590 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 135/563 (23%), Positives = 261/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIDVQRENKHCKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAADNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I + ++ +NA G ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASYPNASEQDIGNFVTNVFRNATGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P Q +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPDNQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHDGDLVFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +H SGH D++ + ++P+ L+ + GE L + LA++ G+ + +NG Sbjct: 359 N--MHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRSLAIKTGMSPKNIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKRFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + ++ D L++ I S L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANKQLMNDSIEVIKKAINSNFEHKKFDWTELKQDIRSDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|322377823|ref|ZP_08052312.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] gi|321281246|gb|EFX58257.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] Length = 553 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDSEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A+ GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAADATGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|312875482|ref|ZP_07735485.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b] gi|311088993|gb|EFQ47434.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b] Length = 630 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAVVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|307704352|ref|ZP_07641269.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] gi|307622112|gb|EFO01132.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] Length = 553 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A+ GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAADATGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|282900545|ref|ZP_06308489.1| hypothetical protein CRC_01908 [Cylindrospermopsis raciborskii CS-505] gi|281194598|gb|EFA69551.1| hypothetical protein CRC_01908 [Cylindrospermopsis raciborskii CS-505] Length = 504 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 162/494 (32%), Positives = 267/494 (54%), Gaps = 10/494 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L +PLGG+ EIG N ++ Y + I++D G++FP + GV++V PD T++ Sbjct: 7 NSTLKIIPLGGLHEIGKNTCVFEY----EDEIILLDAGLAFPTGAMHGVNIVLPDTTYLR 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + + + + +TH HEDH G + +P +Y A+ +LE K VS + Sbjct: 63 ENKHKIRGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLALAVLEGKLEEAGVSDRTQLR 122 Query: 122 SFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 D V +G F +E +R HSI ++ + I +PVG ++HTGD+K+D I G+ D Sbjct: 123 KVMPRDVVRIGKSFFVEYIRNTHSIADSFTVAIHTPVGVVMHTGDFKIDHTPIDGETFDL 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G+L L+ DSTNA G SE+ + N+ + A+G + VTTF+SSV RI Sbjct: 183 QRLAEHGEKGVLCLLSDSTNAEVPGFTPSERAVYPNLDRVFSQARGRLFVTTFASSVHRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ++ +A++ R + ++G S+ ++ A ++G IK +D LF + P E ++++ T Sbjct: 243 NIVLQLAKEHNRVVTVIGRSMLNFIAHARNLGYIKCEDSLFQPLHTIRNLPDENVVILTT 302 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +A+ +++ E ++K+ E DTV+FS+ IPGN +A+ + ++L+ QG +V+ Sbjct: 303 GSQGETMAAMTRIANKEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVVYG 362 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 E VHVSGH + K M RP+ V +HGE LV H E A GI + +R Sbjct: 363 R-EKGVHVSGHGCQEEQKLMIALTRPKFFVPVHGEHRMLVKHSETAQSMGIPRENMVIIR 421 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG ++ L + I I +V G+ L D G + + +R+ ++ G +V +D + Sbjct: 422 NGDVIELTENSIRIAAQVPSGIELVDTTSSGMVSAKVLQERQTMAAEGLATVAAAIDWNG 481 Query: 478 NIFGVPEIVDIGIP 491 + PEI G+ Sbjct: 482 KLLAKPEIYLRGVV 495 >gi|309809285|ref|ZP_07703154.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] gi|329921340|ref|ZP_08277778.1| hypothetical protein HMPREF9210_0887 [Lactobacillus iners SPIN 1401G] gi|308170398|gb|EFO72422.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] gi|328934632|gb|EGG31136.1| hypothetical protein HMPREF9210_0887 [Lactobacillus iners SPIN 1401G] Length = 631 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|225677114|ref|ZP_03788115.1| metallo-beta-lactamase superfamily protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590842|gb|EEH12068.1| metallo-beta-lactamase superfamily protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 544 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 202/556 (36%), Positives = 317/556 (57%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN++LY Y KWIMID GV F + +PGV+L+ DI F Sbjct: 3 INKNEFLFLPLGGVGRIGMNVSLYHY----QGKWIMIDLGVGFADEIMPGVELLIADIDF 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L +Y + F + L+ K R+ +P Sbjct: 59 IAQRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPV 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++G F++E + V HSIPE +++I + +G+ +HTGDWK D ++G ++ Sbjct: 119 KEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNM 178 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L IG++G +LA +CDSTN + + SE I NIY+I+K +K V V+ F+S+V+R Sbjct: 179 ERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVAR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I A+ + RK+VLLG SL R+V VA D G + FL + +PRE+L+++ T Sbjct: 239 IETISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A A+L+ + K+ + DT+IFSS+ IPGNE ++ N +E GV VI E Sbjct: 299 GCQGEPLAATARLAAKSHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITE 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 E VH SGHP +LK MY I+P++ + +HGE +H AH + A + G+A + G Sbjct: 359 KTEH-VHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L E +D + F DG L+ I R+++ G + V +++ + Sbjct: 418 DIVNLENG--EKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I K++ K V + P + ++ I S++ S+LK Sbjct: 476 LAKPKVFVPGVFEVLEDAATIQKIVKK-VESLFSLQPTKK------IKNKIESSILSILK 528 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 529 EYLLKRPIIEVQIEQV 544 >gi|259500688|ref|ZP_05743590.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|302191378|ref|ZP_07267632.1| hypothetical protein LineA_05142 [Lactobacillus iners AB-1] gi|312871409|ref|ZP_07731504.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a] gi|312872278|ref|ZP_07732348.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1] gi|259168072|gb|EEW52567.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|311092101|gb|EFQ50475.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1] gi|311093062|gb|EFQ51411.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a] Length = 628 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|309805351|ref|ZP_07699401.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|312873959|ref|ZP_07733995.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d] gi|308165351|gb|EFO67584.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|311090508|gb|EFQ48916.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d] Length = 629 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|24379843|ref|NP_721798.1| hypothetical protein SMU.1444c [Streptococcus mutans UA159] gi|290580186|ref|YP_003484578.1| hypothetical protein SmuNN2025_0660 [Streptococcus mutans NN2025] gi|24377815|gb|AAN59104.1|AE014977_3 conserved hypothetical protein [Streptococcus mutans UA159] gi|254997085|dbj|BAH87686.1| hypothetical protein [Streptococcus mutans NN2025] Length = 554 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 142/558 (25%), Positives = 260/558 (46%), Gaps = 14/558 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIIALGGVRENGKNFYVVE----VNDAIFILDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 +K + IF+TH H D GAL L S + PV+ S I L + +KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYLLSDVKAPVFGSELTIELAKLVVKNNDATKKFHNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ I + HSIPE++ +V+ + GNIV+TGD+K D A TD + Sbjct: 119 DAQTEIEFDDAIISFFKTTHSIPESLGIVVGTKEGNIVYTGDFKFDQAASKLYQTDLARI 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + ++ N +G ++V +S++ RI+ + Sbjct: 179 AEIGREGVLALLSDSANADSTVQIASEAEVGIEMEQVISNWEGRIIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 239 FDSAANNGRRVVLTGYDVENIVRTAIRLKKLSLVDEKLIVKPKDMHKFEDHELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 EP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MSEPLNGLRKMAIGRHRYVEIKDGDLVYIVTTPTVSKEAVVARVENMIYKAGGDVRLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + + VSGH DL+ M ++P+ L I GE L AH +LAL+ G+ + +++G Sbjct: 359 D--LRVSGHANGRDLQLMINLLKPKYLFPIQGEYRELAAHADLALEIGMFPENIYIMKHG 416 Query: 420 KMLRLFP-DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 ++ D + G + DG IG ++ + R+ LS G + + ++ Sbjct: 417 DIMVYDKEDGFLHEGGIPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIIALTVNKKEK 476 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I +I G Y I + V V + Q D L+ + + Sbjct: 477 KIISRAKINTRGF-VYVRKSRDILRESADIVNKAVENYLQQDTFDWGELKSIVRDEIGKF 535 Query: 538 LKKVWGKKPLVTVFINKI 555 L + ++P + + ++ Sbjct: 536 LFEQTKRRPAILPVVMEV 553 >gi|307708315|ref|ZP_07644782.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] gi|307615761|gb|EFN94967.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] Length = 553 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 249/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTISDWDGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A+ GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAADATGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|329117830|ref|ZP_08246547.1| ribonuclease J 2 [Streptococcus parauberis NCFD 2020] gi|326908235|gb|EGE55149.1| ribonuclease J 2 [Streptococcus parauberis NCFD 2020] Length = 554 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 260/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+++ GVDLV P++ ++++ Sbjct: 3 DIKVIALGGVREYGKNFYLVE----VNESMFILDAGIKYPENEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISF 123 + + +F+TH H D GAL L S + VPV+ S I L + K Sbjct: 59 KDKVQGVFLTHGHADAIGALPYLLSDVSVPVFGSELTIELAKLFVKGNNNTKKFNNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE++ +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFKDGLVSFFKTTHSIPESLGIVIGTDQGNIVYTGDFKFDPAARKSYETDLGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + +++ +A G V+V +S++ RI+ + Sbjct: 179 AEIGKEGVLALLADSANATSNVQIASESEVGEEMNNVIGDADGRVIVAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 +D A R++VL G+ ++ +V AI + + ++L + + Y +L+++ G Sbjct: 239 LDAAVAHSRRVVLTGTDVENIVRTAIRLKKLMIVDERLLIKPKDMNKYDDNELVILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAVGRHRYVQIKEGDLVYIVTTPNVSKEAMLARVENLVYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++P+ L + GE L AH +A + G+ + ++ G Sbjct: 359 N--LRVSGHANGRDLQLLINLMKPKYLFPVQGEYRDLAAHAVVAEEVGVFPEDIYIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L PD V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLNPDGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKT 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + V TTV + D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESADLVNTTVGNYLLQDNFDWGELKSSVRDELSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|57651845|ref|YP_186151.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|88194985|ref|YP_499785.1| hypothetical protein SAOUHSC_01252 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|269202892|ref|YP_003282161.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|57286031|gb|AAW38125.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87202543|gb|ABD30353.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|262075182|gb|ACY11155.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] Length = 523 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 144/526 (27%), Positives = 259/526 (49%), Gaps = 7/526 (1%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 M+D G+ FP+D++ G+D+V PDI+++++ + L IF+TH HE GA+ + L Sbjct: 1 MFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDA 60 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVY S I L++ + KK+ + + +I HSIP+++ + I Sbjct: 61 PVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCI 120 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + G IV+TG++K D D + IG EG+ L+ DST A + G E I Sbjct: 121 HTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVI 180 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 + ++YD +G ++V+ ++S+ RI+ +++IA ++ RK+ LG SL+ ++A +G Sbjct: 181 EHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGY 240 Query: 274 IK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 L + YP+ ++I+IATG QGEP AL+Q+++ + + + + E D+V + Sbjct: 241 FDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI 300 Query: 333 RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 A EV I + N LV G +I +H S H +LK M ++P+ + + Sbjct: 301 TASANMEVIIANTLNELVRAGAHII--PNNKKIHASSHGCMEELKMMINIMKPEYFIPVQ 358 Query: 393 GEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKF 450 GE +AH +LA + G+ + V G ++ + + ++V G L DG IG Sbjct: 359 GEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDV 418 Query: 451 ADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVI 509 ++ + R L+ G V LD + I PEI G Y + + + + V Sbjct: 419 GNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGF-VYVRESEDLLREAEEKVR 477 Query: 510 TTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 V Q +R + +++++ + LL + ++P++ I++I Sbjct: 478 EIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI 523 >gi|315221395|ref|ZP_07863316.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315189514|gb|EFU23208.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 553 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 259/561 (46%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGGV E G N+ Y + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSN--IKLIALGGVRENGKNL----YIAEVDESIFILDVGLKYPENEQLGVDFVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALPYLLAETKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + + HSIPE++ +V+++ GNIV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTIVSFFKTTHSIPESLGIVLKTSEGNIVYTGDFKFDQTASQSYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + +G V+V +S++SR Sbjct: 175 FARLAEIGREGVLALLSDSANADSSIQVASESEVAKEISDTIGDWEGRVIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + + A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 235 IQQVFEAAARTGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLVYIVTTPSIAKEALVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 LITQD--LRVSGHGNERDLQLMLNLLQPKFLFPIQGEYRELAAHAKAAMAIGMLPENIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKRGSIMEYEKGDFVPAGAVSSGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D D L+ S+ L Sbjct: 473 RDKKIISKAKVHTRGF-VYVKKSRDILRESADLINKTVEDYLAKDNFDWSELKGSVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + ++P + + ++ Sbjct: 532 AKYLFEQTKRRPAILPVVMEV 552 >gi|161507345|ref|YP_001577299.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DPC 4571] gi|160348334|gb|ABX27008.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DPC 4571] Length = 590 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 134/563 (23%), Positives = 262/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + + IF+TH H D GAL + +PV+ S +I L + + K Sbjct: 59 YGERVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIDVQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAADNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I + ++ +NA G ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASYPNASEQDIGNFVTNVFRNATGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P Q +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPDNQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D + ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHDGDLIFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +H SGH D++ + ++P+ L+ + GE L + LA++ G+ + +NG Sbjct: 359 N--MHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRSLAIKTGMSPKNIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKRFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + ++ D L++ I S L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANKQLMNDSIEVIKKAINSNFEHKKFDWTELKQDIRSDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|288905059|ref|YP_003430281.1| hypothetical protein GALLO_0858 [Streptococcus gallolyticus UCN34] gi|288731785|emb|CBI13350.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34] Length = 553 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 261/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P+I ++++ Sbjct: 3 DIKIIALGGVRENAKNLYVVE----VNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISF 123 +K + IF+TH H D GAL + S PV+ SP I L + + V K Sbjct: 59 KKRVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ +I + HS+PE++ +V+ + GNIV+TGD+K D A TD L Sbjct: 119 DAETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + I+ +A+G V++ +S++ RI+ + Sbjct: 179 TEIGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G + +V AI + ++ ++L + + + +LI++ G Sbjct: 239 FDSAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ R V++ E D V + E A+ ++N + + G V Sbjct: 299 MGEPINGLQKMALRRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVK--LI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 ++VSGH DL+ M ++P+ L + GE +L H ELA + G+ + V+ G Sbjct: 357 TQTMNVSGHANARDLQLMINLLQPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DVMVLGKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y I + + V TV + D L+ ++ + L Sbjct: 477 IVSKAKIHTRGF-VYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|33862208|ref|NP_893769.1| hypothetical protein PMM1652 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634426|emb|CAE20111.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 667 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 279/558 (50%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ Y I+ID G++FP D + GV++V PD +++ Sbjct: 25 LKIIPLGGLHEIGKNTCVFEY----QDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANL 80 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +TH HEDH G + ++P +Y P AI +L+ K V+ + + + Sbjct: 81 NRFRGMIVTHGHEDHIGGISHHLKKFNIPVIYGPPLAISMLKGKMEEAGVADRTTTQTIE 140 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V +G FS+E +R HSI ++ +L + +PVG + TGD+K D D + + Sbjct: 141 PRQVVKLGQHFSLEFIRNTHSIGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERM 200 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTN+ +G SE + N+ I+ AKG V++TTF+SS R+ + Sbjct: 201 AFYGEKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRIISEAKGRVMLTTFASSTHRVAMV 260 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I +A + GRKI L+G S+ VV ++G IK D LF +S P + +++ TGSQ Sbjct: 261 IQLAMKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ 320 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++ R E +VKL DTVIFSS IPGN +++ H +RL++ G VI E Sbjct: 321 GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVVHSIDRLIKLGANVIYGK-E 379 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH +D + M I+P+ V +HGE V H + A G+ + + NG Sbjct: 380 HGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGKTAESMGVDPNNILILDNGD 439 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + L D + D V G+ + D + +R+QL+ G ++V + N+ Sbjct: 440 TIELRADSMIQGDPVKSGIEMLDNTRTCVVDARALKERQQLADDGIVTVLAPISTDGNMV 499 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + P D ++ I Sbjct: 500 APPRVSLRGVVI-SADPRKMSMWTEREINWVLENRWKQLSRQTSPNSFEVDWIGVQREIE 558 Query: 532 SALRSLLKKVWGKKPLVT 549 + L +++ +PL+ Sbjct: 559 NGLTRRMRRELQVEPLIL 576 >gi|307710652|ref|ZP_07647085.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|307618595|gb|EFN97738.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] Length = 553 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----NGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTISDWDGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A+ GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAADATGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|227893373|ref|ZP_04011178.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus ultunensis DSM 16047] gi|227864788|gb|EEJ72209.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus ultunensis DSM 16047] Length = 600 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 131/563 (23%), Positives = 258/563 (45%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNTSISFFHTTHSIPDSLGIDVHTPEGEIVYTGDFKFDPTAAKNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I K + ++ +NA G ++V +S+++R++ Sbjct: 179 LAEIETKGVLALLSDSSNAEASFPNASEQDIGKFVTNVFRNATGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P +Q +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPNDQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G V+ Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHAVETMVAETSDLVYKAGGTVVQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H SGH D++ + ++P+ L+ + GE L + LA + G+ Sbjct: 359 N--MHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRSLATKTGMNPKDIYITKNG 416 Query: 422 ----LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKRFYLSDPVPGDDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMNDSIEVIKKAIKNNFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|304385130|ref|ZP_07367476.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] gi|304329324|gb|EFL96544.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] Length = 567 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 154/562 (27%), Positives = 263/562 (46%), Gaps = 13/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + +P GGV E G NM ++DCG+ +P+++L G+D+V PD ++++ Sbjct: 2 SDVIKIIPFGGVRENGKNMYAVEI----HNDIYILDCGLKYPENELLGIDIVIPDFSYLV 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCI 121 + + ++ +F+TH H D GAL + VPV+ S I L + + + K Sbjct: 58 ENKDRIVGVFLTHGHADAIGALPYFLKEIEVPVFGSEMTIALAKITVNDDPDLRKFKNFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D G ++ + H+IP+++ +V+ G IV+TGD+K D A G TD Sbjct: 118 VVDEKKEIDFGDVTVSFFKTTHTIPDSLGIVLDCDEGRIVYTGDFKFDQTATDGYATDFG 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG + ++AL+ DS NA +E I +I +I+K +G V+V + +S++ RI+ Sbjct: 178 RLAQIGTKKVIALLSDSANAENFERPSNETEIAASIAEIIKYHEGRVVVASVASNILRIQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIAT 299 +ID A Q GRK+VL G L+++V+ AI + I D L + E+ IV+ T Sbjct: 238 QVIDAAVQSGRKVVLTGHDLEKIVNTAIKLNKINIPDDDLIVPLNKLDKLAPEETIVLET 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G GEP AL +++ +++ + D V+ ++ E K+ L G V + Sbjct: 298 GKLGEPIKALQKMASRRRGKLRIEQGDLVLIATNPSHAMETTFAKTKDMLYRAGAEVKSI 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + GH NDL+ M I+PQ L+ I GE L AH+ELA Q G+ + V Sbjct: 358 SDRANAN--GHASRNDLQLMLNLIKPQFLIPIQGEYRLLAAHQELAEQVGMKPEQIFIVN 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL-LDNH 476 G +L + + G + DG +G ++ + R+ LS G V Sbjct: 416 KGDVLEYQDGEMFHGKGIEVGNTMIDGIGVGDIGNIVLRDRKILSEDGVFVAVVTIDRKK 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I G Y G + + K V TV + D L++ + L Sbjct: 476 KIIIKEPKITSKGF-VYVKASGDLIEESSKLVKKTVQANLDNKEFDWGHLKQDVRDKLGK 534 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L ++P++ I ++++ Sbjct: 535 YLYDQTKRRPVILPVIMEVNQH 556 >gi|262045887|ref|ZP_06018851.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|260573846|gb|EEX30402.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] Length = 594 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 137/563 (24%), Positives = 265/563 (47%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 DQIKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKRRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A L TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAALNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I K + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASFPNASEQDIGKFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A G++++L G L ++V ++ +G + + L + + P EQ +++ TG Sbjct: 239 VLNAAAATGKRVLLTGRDLAKIVRTSMKLGYLDVPEGLLMRVKDLKTVPDEQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 +H SGH DL+ + ++P+ L+ + GE L ++LA++ G+ + +NG Sbjct: 359 N--IHTSGHATGRDLQLLITTLKPKFLIPVIGEYRLLEVVRDLAIKAGMNPKDIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLEYDFKQKRFFLTDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMSDSIDVIKKAIQANFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|296125358|ref|YP_003632610.1| RNA-metabolising metallo-beta-lactamase [Brachyspira murdochii DSM 12563] gi|296017174|gb|ADG70411.1| RNA-metabolising metallo-beta-lactamase [Brachyspira murdochii DSM 12563] Length = 635 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 162/564 (28%), Positives = 286/564 (50%), Gaps = 22/564 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+++ +PLGGV EIGMNM + YG + +++DCG FP+ + G+D V PD +++ Sbjct: 3 SNDKIRIIPLGGVQEIGMNMTVIEYG----NEVLVVDCGFMFPRYHMLGIDYVIPDTSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-KKIP 119 KN++ + +TH HEDH GA+ +P+Y S I L AK + K Sbjct: 59 EN--KNVIGLILTHGHEDHIGAIPHFLRKFPDIPIYGSRLTIAFLTAKLNDYKNEYKDAK 116 Query: 120 CISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + +K+ +G F IE +RVNHSIP+ + + I +P+G I+HTGD+K+D + Sbjct: 117 LYEVEPRNKIQLGMNFDIEFIRVNHSIPDGVGIAITTPLGVIIHTGDFKIDLNPTTDKFI 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D G G+L ++ DSTN +EG +SE ++ N+ + G ++V F+SS+ Sbjct: 177 DLYKFAEYGENGVLLMLADSTNCQKEGFSMSESVVQNNMTPLFAYEDGMIIVAVFASSIE 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+ ++ A+ + + G SL + +A D+G + + + + YPRE+++ I Sbjct: 237 RIQDLVTAAKVNNKYVAFSGRSLLKFTKIAQDMGYLNLYDIVIPIDKINRYPREKIVCIT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP S+L+ ++ +++K+ + D +IFSS IPGNE+A+ + N L + G +++ Sbjct: 297 TGTQGEPYSSLSLIAAEAHKHIKVEDGDMIIFSSSVIPGNEMAVTRMINNLFDLGAKMV- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV--PPV 416 + + +HVSGH DLK MY+ ++P+ V IHGE HL+ H +L + Sbjct: 356 GEDKKLLHVSGHASSEDLKLMYRLVKPKYFVPIHGEKRHLITHIKLVENLNGLDTKGFLL 415 Query: 417 RNGKMLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-- 473 NG +L + ++ + + DG +G + R QLS G + NV+ Sbjct: 416 YNGDVLEIDETLEAKLAEPIEIRNIYVDGKGVGDLEESIFHDREQLSLNGVVVANVIAKK 475 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIH-------KLLLKTVITTVVDLPQFRRKDLKLL 526 + ++ G G+ + + + + + V L ++ + Sbjct: 476 NKTGQYDIKVDLESKGFTYNGGEKEGLIHKTEQLREEGINSAMAAVKKLLDRNKRTPSTI 535 Query: 527 RESISSALRSLLKKVWGKKPLVTV 550 + + ALR ++ G++P++ V Sbjct: 536 KYEVREALRKKFMQIIGREPVIFV 559 >gi|290890823|ref|ZP_06553890.1| hypothetical protein AWRIB429_1280 [Oenococcus oeni AWRIB429] gi|290479595|gb|EFD88252.1| hypothetical protein AWRIB429_1280 [Oenococcus oeni AWRIB429] Length = 633 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 252/570 (44%), Gaps = 17/570 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +P GGV E G NM + + ++D G+ +P+ DL GVD+V PD + Sbjct: 1 MVKTALSIIPFGGVRENGKNMYAV----TVNDEIYILDAGLKYPETDLLGVDVVVPDFNY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIP 119 ++ ++ +F+TH H D GAL L L VPV+ + F + L + + +S Sbjct: 57 LVDHADQVVGVFLTHGHADAIGALPYLLEVLRVPVFGTEFTLALAKQQVSRRPSLSDFDD 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 V+ G + HSIPE++ +V+ + G IV+TGD+K D+ A TD Sbjct: 117 YNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFKFDNTAKGPYKTD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVS 238 L IG G+LAL+ D G +SE I + ++ +NA ++V T +S+V Sbjct: 177 YSRLTRIGQRGVLALLADVNGVETPGESVSESAIDEFVFQTFRENADRRIIVATVASNVQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQL 294 RI+ +I+ A Q GRKI + G+ L++VV A+D + +LF + ++ +L Sbjct: 237 RIQEVINSAYQTGRKIAISGNDLEQVVKTALDSKRLNLPTSYNKLFTNIKNLKSVEPNKL 296 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +++ TG GEP L ++++G+ R V E D + ++ +E + ++ + +G Sbjct: 297 VILETGKMGEPIRDLQRMAKGDDRYVSFNENDLIFVATTPSISSESIMAKTRDLIFRRGA 356 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--AC 412 V++ + SGH NDL+ M +I+P + GE LA + GI Sbjct: 357 NVVSIKDN--LRSSGHASQNDLQFMLNFIKPDYFFPVSGEYRVFSVADFLAQEVGIKKNH 414 Query: 413 VPPVRNGKMLRLFPDPIEII--DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVN 470 + G + P+ + D + DG ++ + R+ LS G + Sbjct: 415 IFLSMKGDQYKFDPENKKFTLEDSFEVDDTMIDGSGNTDVGNIVLRDRKMLSEDGVVIAA 474 Query: 471 VLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 +D + P I G + IH+ V + L D L+ Sbjct: 475 ATIDRKKKKVVAAPRITTRGFIFVKTNRELIHESAKVMVDQIELYLDNTDDFDWNDLKSG 534 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + A+ + ++P+V + + ++ R Sbjct: 535 VKDAMSKFFYEQTKRRPVVMPVVMEANQNR 564 >gi|270291417|ref|ZP_06197639.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus acidilactici 7_4] gi|270280263|gb|EFA26099.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus acidilactici 7_4] Length = 567 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 154/562 (27%), Positives = 263/562 (46%), Gaps = 13/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + +P GGV E G NM ++DCG+ +P+++L G+D+V PD ++++ Sbjct: 2 SDVIKIIPFGGVRENGKNMYAVEI----HNDIYILDCGLKYPENELLGIDIVIPDFSYLV 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCI 121 + + ++ +F+TH H D GAL + VPV+ S I L + + + K Sbjct: 58 ENKDRIVGVFLTHGHADAIGALPYFLKEIEVPVFGSEMTIALAKITVNDDPDLRKFKNFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D G ++ + H+IP+++ +V+ G IV+TGD+K D A G TD Sbjct: 118 VVDEKKEIDFGDVTVSFFKTTHTIPDSLGIVLDCDEGRIVYTGDFKFDQTATDGYATDFG 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG + ++AL+ DS NA +E I +I +I+K +G V+V + +S++ RI+ Sbjct: 178 RLAQIGTKKVIALLSDSANAENFERPSNETEIAASIGEIIKYHEGRVVVASVASNILRIQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPREQLIVIAT 299 +ID A Q GRK+VL G L+++V+ AI + I D L + E+ IV+ T Sbjct: 238 QVIDAAVQSGRKVVLTGHDLEKIVNTAIKLNKINIPDDDLIVPLNKLDKLAPEETIVLET 297 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G GEP AL +++ +++ + D V+ ++ E K+ L G V + Sbjct: 298 GKLGEPIKALQKMASRRRGKLRIEQGDLVLIATNPSHAMETTFAKTKDMLYRAGAEVKSI 357 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 + GH NDL+ M I+PQ L+ I GE L AH+ELA Q G+ + V Sbjct: 358 SDRANAN--GHASRNDLQLMLNLIKPQFLIPIQGEYRLLAAHQELAEQVGMKPEQIFIVN 415 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL-LDNH 476 G +L + + G + DG +G ++ + R+ LS G V Sbjct: 416 KGDVLEYQDGEMFHGKGIEVGNTMIDGIGVGDIGNIVLRDRKILSEDGVFVAVVTIDRKK 475 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P+I G Y G + + K V TV + D L++ + L Sbjct: 476 KIIIKEPKITSKGF-VYVKASGDLIEESSKLVKKTVQANLDNKEFDWGHLKQDVRDKLGK 534 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L ++P++ I ++++ Sbjct: 535 YLYDQTKRRPVILPVIMEVNQH 556 >gi|58616880|ref|YP_196079.1| hypothetical protein ERGA_CDS_01530 [Ehrlichia ruminantium str. Gardel] gi|58416492|emb|CAI27605.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 542 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 183/556 (32%), Positives = 309/556 (55%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L+F+PLGGVG+IGMN+ LY + KW++ID G F D++PG+D++ DI+F Sbjct: 1 MNIDNLLFIPLGGVGQIGMNVNLYHF----KGKWVIIDFGAGFADDNMPGIDMIVADISF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I +THAHEDH G + LW L P+YA+ F LL +K ++ I Sbjct: 57 IKQNKKDLLGIVLTHAHEDHIGGIQYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQ 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I K+ +G F++E + + HSIPE A+ + + G ++HTGDWKLD++ ++ +++ Sbjct: 117 I--DPSQKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDWKLDNNPVISPLSNT 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G++G+LAL+CDSTN + SE +++++++I+K V ++ F+S+++RI Sbjct: 175 KRLQELGDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARI 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +I +A+++GRKI +LG SL R++ A D G + F+ P+ Q++++ TG Sbjct: 235 NTIACVAKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTG 294 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP +A A+L+ KL +DT+IFSS+ IPGNE I +I N+ V GV VI E Sbjct: 295 CQGEPLAATAKLANNSHSLTKLENEDTIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEF 354 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY +RP++ + +HGE +H+ H ++A Q + V G Sbjct: 355 MEH-VHVSGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQCNVEKAIIVHPGD 413 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L + ++ V G F DG + I R+++ G + V ++L+ + Sbjct: 414 VIDLVHG--KKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELL 471 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ + K + + + + + + K + + +LR +K Sbjct: 472 KTPRIFAPGVLDNSTSNNFLIKKITSKISSQLHTKKENKIK--HHIENIVFDSLRYDIKN 529 Query: 541 VWGKKPLVTVFINKIS 556 KP + V I + Sbjct: 530 ----KPFIEVQIEYVD 541 >gi|227877361|ref|ZP_03995432.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus JV-V01] gi|256842920|ref|ZP_05548408.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus 125-2-CHN] gi|256848705|ref|ZP_05554139.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus MV-1A-US] gi|293381241|ref|ZP_06627248.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|227863029|gb|EEJ70477.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus JV-V01] gi|256614340|gb|EEU19541.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus 125-2-CHN] gi|256714244|gb|EEU29231.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus MV-1A-US] gi|290922209|gb|EFD99204.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] Length = 585 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 137/563 (24%), Positives = 265/563 (47%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 DQIKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKRRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A L TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAALNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I K + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASFPNASEQDIGKFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A G++++L G L ++V ++ +G + + L + + P EQ +++ TG Sbjct: 239 VLNAAAATGKRVLLTGRDLAKIVRTSMKLGYLDVPEGLLMRVKDLKTVPDEQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 +H SGH DL+ + ++P+ L+ + GE L ++LA++ G+ + +NG Sbjct: 359 N--IHTSGHATGRDLQLLITTLKPKFLIPVIGEYRLLEVVRDLAIKAGMNPKDIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLEYDFKQKRFFLTDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMSDSIDVIKKAIQANFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|319939346|ref|ZP_08013706.1| metallo-beta-lactamase [Streptococcus anginosus 1_2_62CV] gi|319811332|gb|EFW07627.1| metallo-beta-lactamase [Streptococcus anginosus 1_2_62CV] Length = 553 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 259/561 (46%), Gaps = 15/561 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGGV E G N+ Y + ++D G+ +P+++ GVD V P++ + Sbjct: 1 MSN--IKLIALGGVRENGKNL----YIAEVDESIFVLDVGLKYPENEQLGVDFVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + + +F+TH H D GAL L VPV+ S I L + KK Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALPYLLVETKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + + HSIPE++ +V+++ GNIV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFKTTHSIPESLGIVLKTSEGNIVYTGDFKFDQTASQSYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + K I D + + +G V+V +S++SR Sbjct: 175 FARLAEIGREGVLALLSDSANADSTIQVASESEVAKEISDTIGDWEGRVIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + + A + GR++VL G ++ +V AI + + ++L + + + +LI++ Sbjct: 235 IQQVFEAAARTGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKEGDLVYIVTTPSIAKEALVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 LITQD--LRVSGHGNERDLQLMLNLLQPKFLFPIQGEYRELAAHAKAAMAIGMLPENIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G ++ V G + DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKRGSIMEYEKGDFVPSGAVSSGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I ++ G Y I + + TV D + D L+ S+ L Sbjct: 473 RDKKIISKAKVHTRGF-VYVKKSRDILRESADLINKTVEDYLEKDNFDWGELKGSVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + ++P + + ++ Sbjct: 532 AKYLFEQTKRRPAILPVVMEV 552 >gi|315653477|ref|ZP_07906398.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|315489168|gb|EFU78809.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] Length = 628 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 137/562 (24%), Positives = 249/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L D + D V + DG + ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVCDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|295425153|ref|ZP_06817858.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] gi|295065212|gb|EFG56115.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] Length = 617 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 135/563 (23%), Positives = 259/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 DQIKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S I L + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLTIELAKIDVKRENKKLKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSI +++ +V+ +P G +V+TGD+K D A TD D Sbjct: 119 IDAHTEIDFKNASISFFHTTHSIADSLGIVVHTPAGEVVYTGDFKFDPSAAPNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I + +LAL+ DS+NA SE+ ++K + D+ +NAKG ++V +S+++R++ Sbjct: 179 LAEIETKHVLALLSDSSNAEAWFPSASEQDLEKYVTDVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A GR+++L G ++V A+ +G + D L + + P ++ +++ TG Sbjct: 239 VLNAAAATGRRVLLTGRDFAKIVRTAMKLGYLDVPDGLLMRVKDLKTTPDDKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 G+P ++L +++ +++ + D V ++ E + + + G VI Sbjct: 299 MGDPLNSLQKMANKRHSMIRIHKGDLVFIATTPSHAVETMVAETSDMVYRAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 + H SGH DL+ + ++P L + GE + HK LA++ G+ V +NG Sbjct: 359 DK--HTSGHATGRDLQLLIDILKPDFLFPVIGEYRLMEIHKNLAIKTGMKKEDVFISKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCYNYDFKKKRFYLTDPVPGEDTMIDGSGVGDVGNIVLRDREILSDDGIFLAVVTIDRKK 476 Query: 478 -NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y K+ ++ + + + + ++ D L++ + + L Sbjct: 477 EKIVARPQVTSRGF-VYIKANHKLMHDSIEVIEKAINNNFEHKKFDWTELKQDVRNDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K +P+V + ++++ R Sbjct: 536 FLYKQTNLRPVVLPVVMEVNQNR 558 >gi|116491276|ref|YP_810820.1| metallo-beta-lactamase superfamily hydrolase [Oenococcus oeni PSU-1] gi|116092001|gb|ABJ57155.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Oenococcus oeni PSU-1] Length = 636 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 252/570 (44%), Gaps = 17/570 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +P GGV E G NM + + ++D G+ +P+ DL GVD+V PD + Sbjct: 4 MVKTALSIIPFGGVRENGKNMYAV----TVNDEIYILDAGLKYPETDLLGVDVVVPDFNY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIP 119 ++ ++ +F+TH H D GAL L L VPV+ + F + L + + +S Sbjct: 60 LVDHADQVVGVFLTHGHADAIGALPYLLEVLRVPVFGTEFTLALAKQQVSRRPSLSDFDD 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 V+ G + HSIPE++ +V+ + G IV+TGD+K D+ A TD Sbjct: 120 YNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFKFDNTAKGPYKTD 179 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVS 238 L IG G+LAL+ D G +SE I + ++ +NA ++V T +S+V Sbjct: 180 YSRLTRIGQRGVLALLADVNGVETPGESVSESAIDEFVFQTFRENADRRIIVATVASNVQ 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQL 294 RI+ +I+ A Q GRKI + G+ L++VV A+D + +LF + ++ +L Sbjct: 240 RIQEVINSAYQTGRKIAISGNDLEQVVKTALDSKRLNLPTSYNKLFTNIKNLKSVEPNKL 299 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +++ TG GEP L ++++G+ R V E D + ++ +E + ++ + +G Sbjct: 300 VILETGKMGEPIRDLQRMAKGDDRYVSFNENDLIFVATTPSISSESIMAKTRDLIFRRGA 359 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--AC 412 V++ + SGH NDL+ M +I+P + GE LA + GI Sbjct: 360 NVVSIKDN--LRSSGHASQNDLQFMLNFIKPDYFFPVSGEYRVFSVADFLAQEVGIKKNH 417 Query: 413 VPPVRNGKMLRLFPDPIEII--DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVN 470 + G + P+ + D + DG ++ + R+ LS G + Sbjct: 418 IFLSMKGDQYKFDPENKKFTLEDSFEVDDTMIDGSGNTDVGNIVLRDRKMLSEDGVVIAA 477 Query: 471 VLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 +D + P I G + IH+ V + L D L+ Sbjct: 478 ATIDRKKKKVVAAPRITTRGFIFVKTNRELIHESAKVMVDQIELYLDNTDDFDWNDLKSG 537 Query: 530 ISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + A+ + ++P+V + + ++ R Sbjct: 538 VKDAMSKFFYEQTKRRPVVMPVVMEANQNR 567 >gi|88607873|ref|YP_505594.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] gi|88598936|gb|ABD44406.1| metallo-beta-lactamase family, beta-CASP subfamily [Anaplasma phagocytophilum HZ] Length = 543 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 201/555 (36%), Positives = 319/555 (57%), Gaps = 17/555 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFI 61 + + +FLPLGGVG+IGMN++LY KWIMID G F D +PGVDLV DI+FI Sbjct: 5 DNKFLFLPLGGVGKIGMNVSLYH----VHGKWIMIDLGAGFADPDSMPGVDLVVADISFI 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + RK+L+ + +THAHEDH GA+ LW L P+YA+ F + +K + IP + Sbjct: 61 RERRKDLVGVVLTHAHEDHIGAIPYLWEDLRCPIYATKFTASFVRSKVEQFSL--NIPIV 118 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G +++G F++E V + HSIPE ++ +R+ +G+++HTGDWKLD + ++G V+D + Sbjct: 119 EVDPGVPLELGPFTLEFVSMTHSIPEMHSIAVRTDLGSVLHTGDWKLDTNPVIGSVSDLE 178 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L +G++GILA++ DSTN EGT SE + +I DI+K K V ++ F+S+V+RI Sbjct: 179 KLKRLGDDGILAVVSDSTNIFTEGTSGSEGSLHDSILDIVKRCKNRVAISLFASNVARIS 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ IA++ GRK+V+LG SL R + A + G + + FL P+E+++ + TG Sbjct: 239 TLSRIAKETGRKVVVLGRSLSRALGAAHECGYLDDPENFLDGRENINLPKEKVLYLCTGC 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +A A+L+ G L DTVIFSS+ IPGNE I + N+LV+QGV V+ E Sbjct: 299 QGEPMAATARLASGSHPFATLESGDTVIFSSKIIPGNERRIFRVFNKLVQQGVEVVTEFT 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E VHVSGHP D++ +Y ++P++ + +HGE +H+ H LA + GI G + Sbjct: 359 ES-VHVSGHPSRTDVRTLYSLLKPKLCLPVHGEYIHMYEHARLAEECGIERCIVSSPGNV 417 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + L +++D V G++ DG + D I+ RR++ G + V +L++ + + Sbjct: 418 IDLVER--KVVDTVDCGVYGVDGEFLRSADDSVISARRKMRDAGAVIVTLLMNRDHQLIR 475 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P ++ G D + ++ K P+ ++ I + + + LK V Sbjct: 476 EPLVIAPGALDSTEDHVLLSEVARKISAGVAGRRPKN-------IKGYIRNLVFAFLKDV 528 Query: 542 WGKKPLVTVFINKIS 556 KPLV V + ++ Sbjct: 529 VKGKPLVEVQLEYVN 543 >gi|46579289|ref|YP_010097.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448703|gb|AAS95356.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233117|gb|ADP85971.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris RCH1] Length = 554 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 175/554 (31%), Positives = 293/554 (52%), Gaps = 15/554 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 PLGG+GEIG+N ++ ++ ++IDCG+ FP D GVD+V P I+++R Sbjct: 10 ITPLGGLGEIGLNCQVW----STADSTVLIDCGLMFPDDYHLGVDVVIPRFDHILQQRDK 65 Query: 68 LMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I +TH HEDH GAL L L +P++ S F + L+E K ++ ++ + G Sbjct: 66 VRGIILTHGHEDHIGALPWLVPHLRGIPIFGSRFTLALVEHKLREHGLADRVEFVPVTPG 125 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + +G + + V HSI E A+ + +PVG ++HTGD+K+D + G TD D + Sbjct: 126 TPLALGDMTFHFLPVCHSIIEGYAVGVETPVGRVLHTGDFKIDPHPLEGSGTDLDLFRSF 185 Query: 187 -GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G+EG+ L+ DSTN REG + E+ I + I A+G +++T FSS + RI+ + D Sbjct: 186 AGDEGVRLLLSDSTNIEREGHSLPEREILSSFRHIFTEAQGRIVITLFSSHIQRIQEVFD 245 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A + GR +V+ G SL + +A + G ++ L + ++++ TGSQGE Sbjct: 246 LAAEFGRTVVVSGRSLMTNIELAREHGFLRVPPALHMDAAGLPPVADRDMVLLVTGSQGE 305 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL++++ GE +++ + E DTV+ SSR IPGN AI + N++ G V + Sbjct: 306 PLSALSRITMGEHKHLTIHEGDTVVMSSRIIPGNARAITRLINQIYRLGAEVYYDKFRA- 364 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 +H SGH + ++L+ M + +RPQ V +HGE HLV H LA + G+A + NG L Sbjct: 365 IHASGHAHRDELRAMIETMRPQCFVPVHGEYRHLVKHARLAQECGVAPERAFILENGDPL 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L P + + + + L DG +G + +R L G + V +++D ++ Sbjct: 425 TLLPQGVRLGERIHVESILVDGKGVGDVGHSVLKERHILGGEGMVIVVLVVDEVTWDVLH 484 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G ++ + + V+ ++P + + L++ I SALR +KV Sbjct: 485 GPEMLSKGF-VFEQHYNHVLEDAKCIVLDIFENIPPG---ETERLQDRIRSALRRFFRKV 540 Query: 542 WGKKPLVTVFINKI 555 + P+V I I Sbjct: 541 LERDPIVVPVITTI 554 >gi|309804157|ref|ZP_07698235.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|308163740|gb|EFO66009.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] Length = 628 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 137/562 (24%), Positives = 249/562 (44%), Gaps = 12/562 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G L L + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDYKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKKK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P + G Y + + + TT+ + ++ D L++ + + L Sbjct: 476 KIVAEPLVSTRGF-IYIKESHDVMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKF 534 Query: 538 LKKVWGKKPLVTVFINKISRQR 559 L K G++P+V + ++++ R Sbjct: 535 LYKETGRRPVVLPIVMEVNQNR 556 >gi|322374745|ref|ZP_08049259.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] gi|321280245|gb|EFX57284.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] Length = 553 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 148/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + R + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENRDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++P G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTEVSFFRTTHSIPESLGVVLKTPKGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDVENIVRTAIRLKKLSLANESLLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPNYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDGL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 AKYLFDQTKRRPAILPVVME 551 >gi|306833246|ref|ZP_07466375.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] gi|304424613|gb|EFM27750.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] Length = 553 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 148/557 (26%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E N+ + + ++D G+ +P+++ GVD V P+I ++++ Sbjct: 3 DIKIIALGGVRENAKNLYVVE----VNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISF 123 +K + IF+TH H D GAL + S PV+ SP I L + + V K Sbjct: 59 KKRVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A +++ +I + HS+PE++ +V+ + GNIV+TGD+K D A TD L Sbjct: 119 DAETEIEFADATISFFKSTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + I+ +A+G V++ +S++ RI+ + Sbjct: 179 TEIGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G + +V AI + ++ ++L + + + +LI++ TG Sbjct: 239 FDSAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ E D V + E A+ ++N + + G V Sbjct: 299 MGEPINGLQKMALGRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVK--LI 356 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 ++VSGH DL+ M + P+ L + GE +L H ELA + G+ + V+ G Sbjct: 357 TQTMNVSGHANARDLQLMINLLHPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 ++ L D V G + DG IG ++ + R+ LS G V + ++ Sbjct: 417 DVMVLDKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I +I G Y I + + V TV + D L+ ++ + L Sbjct: 477 IVSKAKIHTRGF-VYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDEVAKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|329767223|ref|ZP_08258750.1| ribonuclease J 1 [Gemella haemolysans M341] gi|328836890|gb|EGF86537.1| ribonuclease J 1 [Gemella haemolysans M341] Length = 480 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 154/481 (32%), Positives = 253/481 (52%), Gaps = 9/481 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K E+ +GG+GEIG N Y + I+ID GV FP D++ G+D V PD ++ Sbjct: 5 IKKNEVGVAAIGGLGEIGKNTYAIQY----RDEIIIIDAGVKFPGDNILGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K + A+ ITH HEDH G L L +++P+Y P AIGL+ +K + K Sbjct: 61 IEKNIDKIKALIITHGHEDHIGGLPFLLRKVNLPIYGGPLAIGLIRSKLEEHNLLAKAEL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + HSIP++ +++ +P GNIVHTGD+K D + ++ Sbjct: 121 NVIDEDTVLSFKYLKVSFHNTTHSIPDSFGVIVNTPQGNIVHTGDFKFDFTPVG-QGSNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + AIG +G+L L+ DSTN+ R SEK + K I +I++ K V+ TF+S+V R+ Sbjct: 180 HKMAAIGEKGVLCLLSDSTNSERTEFTQSEKEVGKTISNILRKEKHRVIFATFASNVYRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +++ + GRKIV+ G S+++ + + ++G IK + F++ + +L+++ T Sbjct: 240 KQVVEACIEHGRKIVVFGRSMEKAIKIGTELGYIKAPKETFVNSKYLNQVDPNKLLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+QGE +AL++++ G + + + DTVIF+S AIPGN ++I + L + G VI Sbjct: 300 GTQGEELAALSRIANGTHKKITIMPTDTVIFASSAIPGNTLSINKNIDLLSKLGANVITS 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 VH SGH + K M++ I+P+ + IHGE V H + A + I + Sbjct: 360 SVN-NVHTSGHGSKEEQKLMFRLIKPKYFMPIHGEYRMQVIHAQTAAECDIPLENSFIME 418 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 NG++L L D I + DG IG + I R++LS G + V++ +D Sbjct: 419 NGEVLALTSDSARIAGKFDASDVYVDGLGIGDIGSVVIKDRKELSEEGVIVVSIAIDFEN 478 Query: 478 N 478 Sbjct: 479 K 479 >gi|57238892|ref|YP_180028.1| hypothetical protein Erum1610 [Ehrlichia ruminantium str. Welgevonden] gi|58578821|ref|YP_197033.1| hypothetical protein ERWE_CDS_01570 [Ehrlichia ruminantium str. Welgevonden] gi|57160971|emb|CAH57877.1| conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] gi|58417447|emb|CAI26651.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 542 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 184/556 (33%), Positives = 310/556 (55%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L+F+PLGGVG+IGMN+ LY + KW++ID G F D++PG+D++ DI+F Sbjct: 1 MNIDNLLFIPLGGVGQIGMNVNLYHF----KGKWVIIDFGAGFADDNMPGIDMIVADISF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I +THAHEDH G + LW L P+YA+ F LL++K ++ I Sbjct: 57 IKQNKKDLLGIVLTHAHEDHIGGIQYLWHDLQCPIYATKFTASLLDSKLKECSLNANITQ 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I K+ +G F++E + + HSIPE A+ + + G ++HTGDWKLD++ ++ +++ Sbjct: 117 I--DPSQKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDWKLDNNPVISPLSNT 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +GN+G+LAL+CDSTN + SE +++++++I+K V ++ F+S+++RI Sbjct: 175 KRLQELGNQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARI 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +I +A+++GRKI +LG SL R++ A D G + F+ P+ Q++++ TG Sbjct: 235 NTIGCVAKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQANKLPKNQILLLCTG 294 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP +A A+L+ KL +DT+IFSS+ IPGNE I +I N+ V GV VI E Sbjct: 295 CQGEPLAATAKLANNSHSLTKLENEDTIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEF 354 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY +RP++ + +HGE +H+ H ++A Q + V G Sbjct: 355 MEH-VHVSGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQCNVEKAIIVHPGD 413 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L + ++ V G F DG + I R+++ G + V ++L+ + Sbjct: 414 VIDLVHG--KKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELL 471 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ + K + + + + + + K + + +LR +K Sbjct: 472 KTPRIFAPGVLDNSTSNNFLIKKITSKISSQLHTKKENKIK--HHIESIVFDSLRYDIKN 529 Query: 541 VWGKKPLVTVFINKIS 556 KP + V I + Sbjct: 530 ----KPFIEVQIEYVD 541 >gi|68171390|ref|ZP_00544783.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ehrlichia chaffeensis str. Sapulpa] gi|88658371|ref|YP_507753.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999185|gb|EAM85842.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ehrlichia chaffeensis str. Sapulpa] gi|88599828|gb|ABD45297.1| metallo-beta-lactamase family, beta-CASP subfamily [Ehrlichia chaffeensis str. Arkansas] Length = 540 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 196/556 (35%), Positives = 317/556 (57%), Gaps = 16/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++L+F PLGGVG+IGMN+ LY + KWI+ID G F D++PG+D++ DI+F Sbjct: 1 MNTDDLLFTPLGGVGQIGMNVNLYH----LNGKWIIIDFGAGFADDNMPGIDMIVADISF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K RKNL+ I +THAHEDH G + LW+ L P+YA+ F LL+AK +I Sbjct: 57 IKKNRKNLLGIVLTHAHEDHIGGIQYLWNDLQCPIYATKFTAALLQAKLKEY--PFRINI 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 K+++G F++E + + HSIPE A+ + + G +VHTGDWKLDD+ I+G V++ Sbjct: 115 TEIDITKKLNLGPFTLEFINLTHSIPEMNAIALHTEKGIVVHTGDWKLDDNPIIGPVSNT 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+CDSTN + SE ++K+I++I+KN V V+ F+S+++RI Sbjct: 175 QRLKELGDEGVLALVCDSTNIFTKNKSGSESDLEKSIFNIIKNCNQKVAVSLFASNIARI 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 +I++IA ++GRK+ +LG SL R++ A D G ++ F++ P +Q++++ TG Sbjct: 235 YTIVNIATKLGRKVAILGKSLIRIIQAAQDSGYLQDIPEFININQANKLPNDQVLLLCTG 294 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGE +A A+L+ KL DT+IFSS+ IPGNE I + N+ V GV VI E Sbjct: 295 CQGEELAATAKLANNSHPFTKLDNGDTIIFSSKIIPGNEKRIYSVFNKFVNMGVNVITEF 354 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP +++ MY +RP++ + +HGE +H+ H ++A Q + V G Sbjct: 355 MEH-VHVSGHPSKSEVSTMYSLVRPKLSIPVHGEYIHMHEHAKVAKQCNVEKAIIVHPGD 413 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ L + I+ V G F DG + I+ R+++ G + + ++L+N + Sbjct: 414 VISLTKK--QKINSVKAGYFGVDGNFLHHPKGNVISMRKKMRDAGIIIITLVLNNKKELL 471 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ + + K+ K + + + +R+ + + + + LK Sbjct: 472 KEPRIFAPGVLDHSNSQAILKKVSSKI-------SSELYSRKINNIRQYVENTVFNALKY 524 Query: 541 VWGKKPLVTVFINKIS 556 KP + V + I+ Sbjct: 525 DIKNKPFIEVQLEYIN 540 >gi|322391384|ref|ZP_08064854.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321145810|gb|EFX41201.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 553 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 148/555 (26%), Positives = 250/555 (45%), Gaps = 13/555 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGV E G NM + + ++D G+ +P+++ GVD+V P++ ++ + Sbjct: 4 IKLTTLGGVRENGKNMYIAEI----NDSIFVLDAGLKYPENEQLGVDVVIPNMEYLFENS 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQ 124 + +F+TH H D GAL L + VPV+ S I L + + V K Sbjct: 60 DRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDSVKKFDDFHVID 119 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD L Sbjct: 120 ENTEIDFGGTVVSFFRTTHSIPESLGVVLKTSEGDIVYTGDFKFDQTASESYATDFGRLA 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG EG+LAL+ DS NA SE + I + + G ++V +S++SRI+ + Sbjct: 180 EIGREGVLALLSDSANADSNVQVASESEVGDEITQTISDWDGRIIVAAVASNLSRIQQVF 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQ 302 D A GR++VL G ++ +V AI + + + L + + + +LI++ TG Sbjct: 240 DAAADTGRRVVLTGFDVENIVRTAIRLKKLSLANENLLIKPKDMSRFEDHELIILETGRM 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 300 GEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMVYQAGGVVKLITQN 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 + VSGH DL+ M ++PQ L I GE L AH ++A+ G+ + + G Sbjct: 360 --LRVSGHGNARDLQLMINLLQPQYLFPIQGEYRELDAHAKVAMAVGMLPERIFIPKRGT 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 + + V G L DG IG ++ + R+ LS G V + ++ I Sbjct: 418 TMSYEHEDFVPSGAVTAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKI 477 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + G Y I + + V TV D Q D L+ + L L Sbjct: 478 ISKARVHTRGF-VYLKKSRDILRESTELVNQTVEDYLQGEDFDWADLKGKVRDNLAKFLF 536 Query: 540 KVWGKKPLVTVFINK 554 ++P + + + Sbjct: 537 DQTKRRPAILPVVME 551 >gi|331266841|ref|YP_004326471.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326683513|emb|CBZ01131.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 553 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 249/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----NGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTEVSFFRTTHSIPESLGVVLKTAKGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPNYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|120603149|ref|YP_967549.1| beta-lactamase domain-containing protein [Desulfovibrio vulgaris DP4] gi|120563378|gb|ABM29122.1| beta-lactamase domain protein [Desulfovibrio vulgaris DP4] Length = 554 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 175/554 (31%), Positives = 293/554 (52%), Gaps = 15/554 (2%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 PLGG+GEIG+N ++ ++ ++IDCG+ FP D GVD+V P I+++R Sbjct: 10 ITPLGGLGEIGLNCQVW----STADSTVLIDCGLMFPDDYHLGVDVVIPRFDHILQQRDK 65 Query: 68 LMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I +TH HEDH GAL L L +P++ S F + L+E K ++ ++ + G Sbjct: 66 VRGIILTHGHEDHIGALPWLVPHLRGIPIFGSRFTLALVEHKLREHGLADRVEFVPVTPG 125 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + +G + + V HSI E A+ + +PVG ++HTGD+K+D + G TD D + Sbjct: 126 TPLALGDMTFHFLPVCHSIIEGYAVGVETPVGRVLHTGDFKIDPHPLEGSGTDLDLFRSF 185 Query: 187 -GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 G+EG+ L+ DSTN REG + E+ I + I A+G +++T FSS + RI+ + D Sbjct: 186 AGDEGVRLLLSDSTNIEREGHSLPEREILSSFRHIFTEAQGRIVITLFSSHIQRIQEVFD 245 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A + GR +V+ G SL + +A + G ++ L + ++++ TGSQGE Sbjct: 246 LAAEFGRTVVVSGRSLMTNIELAREHGFLRVPPALHMDAAGLPPVADRDMVLLVTGSQGE 305 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 P SAL++++ GE +++ + E DTV+ SSR IPGN AI + N++ G V + Sbjct: 306 PLSALSRITMGEHKHLTIHEGDTVVMSSRIIPGNARAITRLINQIYRLGAEVYYDKFRA- 364 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 +H SGH + ++L+ M + +RPQ V +HGE HLV H LA + G+A + NG L Sbjct: 365 IHASGHAHRDELRAMIETMRPQCFVPVHGEYRHLVKHARLAQECGVAPERAFILENGAPL 424 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFG 481 L P + + + + L DG +G + +R L G + V +++D ++ Sbjct: 425 TLLPQGVRLGERIHVESILVDGKGVGDVGHSVLKERHILGGEGMVIVVLVVDEVTWDVLH 484 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 PE++ G ++ + + V+ ++P + + L++ I SALR +KV Sbjct: 485 GPEMLSKGF-VFEQHYNHVLEDAKCIVLDIFENIPPG---ETERLQDRIRSALRRFFRKV 540 Query: 542 WGKKPLVTVFINKI 555 + P+V I I Sbjct: 541 LERDPIVVPVITTI 554 >gi|303232228|ref|ZP_07318927.1| putative ribonuclease J 1 [Atopobium vaginae PB189-T1-4] gi|302481638|gb|EFL44699.1| putative ribonuclease J 1 [Atopobium vaginae PB189-T1-4] Length = 492 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 171/499 (34%), Positives = 259/499 (51%), Gaps = 14/499 (2%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M+ + L +PLGG+ IG NM + YG I+ DCG+ FP D+ PG+DLV PD Sbjct: 1 MRKTKSVLKIIPLGGLDGIGKNMTAFQYG----NDLILADCGLMFPDDNQPGIDLVLPDY 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSK 116 T++++ L I ITH HEDH GA+ L L V +Y+S ++G + AK +V Sbjct: 57 TYVLEHADMLRGIIITHGHEDHIGAIPYLLGDLQQKVNIYSSKLSLGFINAKLSEYKVVA 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 C D V +GAF + + HSIP + + ++P G+ + TGD+K D I G Sbjct: 117 PNLC-EVHDRDVVRLGAFEVNFFSITHSIPGALGIYTKTPAGSFMLTGDFKFDQTPIDGV 175 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 TD ++C EGI L+ DSTNA + G SE + ++ I+KNA+G V V +FSS Sbjct: 176 TTDFQAICEFAQEGIDVLLADSTNATKPGFTPSEAAVGPSLRHIIKNAQGRVFVASFSSH 235 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLI 295 + RI+ + D A +GRK+V+ G S+ +A ++G +K + P ++++ Sbjct: 236 IHRIQQVCDAAVSVGRKVVVTGRSMISNTRIARELGYLKISPDDIIDALEMTDMPDDKIV 295 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V+ TGSQGEP SALA+++ GE + + E DTVI S+ +PGNE ++ I N L + G Sbjct: 296 VMCTGSQGEPMSALARMATGEHKTFSIRESDTVIISATPVPGNEKSVQGIVNLLSKTGCD 355 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACV 413 V + + VHVSGH +LK + +P V +HGE +H H +LA Q GI + Sbjct: 356 V-YDRSRTLVHVSGHASQEELKLLMAMTKPTYFVPVHGEAVHQRQHAKLAEQMGIAPDHI 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG L + ++ V G+ DG +G + R++LS G + V + Sbjct: 415 FIADNGDELIMKNHKLQWGQNVESGVIYVDGLSVGDADPVVFRDRQKLSRDGIVFCVVTI 474 Query: 474 DNHYNIFGVPEIVDIGIPA 492 N I E+ G+ Sbjct: 475 TNQRKI-ADVELSSRGVSF 492 >gi|327183364|gb|AEA31811.1| hypothetical protein LAB52_04205 [Lactobacillus amylovorus GRL 1118] Length = 601 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 132/563 (23%), Positives = 259/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IFITH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFITHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPEGEIVYTGDFKFDPTAAKNYHTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I + G+LAL+ DS+NA SE+ I + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEHRGVLALLSDSSNAEASFPNASEQDIGNFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P + +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPNNKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKCHSMITIHKGDLVFIATTPSHSVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H SGH D++ + ++P+ L+ + GE L ++LA++ G+ Sbjct: 359 N--IHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRDLAVKAGMNPKDIYITKNG 416 Query: 422 ----LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKHFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMNDSIEVIKKAINNNFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKRTNRRPVILPVVMEVNQNR 558 >gi|325956538|ref|YP_004291950.1| hypothetical protein LAC30SC_04230 [Lactobacillus acidophilus 30SC] gi|325333103|gb|ADZ07011.1| hypothetical protein LAC30SC_04230 [Lactobacillus acidophilus 30SC] Length = 601 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 132/563 (23%), Positives = 259/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IFITH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFITHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKHCKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPEGEIVYTGDFKFDPTAAKNYHTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I + G+LAL+ DS+NA SE+ I + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEHRGVLALLSDSSNAEASFPNASEQDIGNFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P + +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTIPNNKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHSVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H SGH D++ + ++P+ L+ + GE L ++LA++ G+ Sbjct: 359 N--IHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRDLAVKAGMNPKDIYITKNG 416 Query: 422 ----LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKNFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMNDSIEVIKKAINNNFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKRTNRRPVILPVVMEVNQNR 558 >gi|315038085|ref|YP_004031653.1| hypothetical protein LA2_04425 [Lactobacillus amylovorus GRL 1112] gi|312276218|gb|ADQ58858.1| hypothetical protein LA2_04425 [Lactobacillus amylovorus GRL 1112] Length = 601 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 132/563 (23%), Positives = 259/563 (46%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 NQLKIMILSGVREQGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IFITH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFITHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKHRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPEGEIVYTGDFKFDPTAAKNYHTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I + G+LAL+ DS+NA SE+ I + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEHRGVLALLSDSSNAEASFPNASEQDIGNFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A+ G++++L G L ++V ++ +G + D L + + P + +++ TG Sbjct: 239 VLNAAKATGKRVLLTGRDLAKIVRTSMKLGYLDVPDGLLMRVKDLKTVPNNKTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHSVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H SGH D++ + ++P+ L+ + GE L ++LA++ G+ Sbjct: 359 N--IHTSGHATGRDIQLLIDTLKPKFLIPVIGEYRLLEIVRDLAVKAGMNPKDIYITKNG 416 Query: 422 ----LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLDYDFKKKHFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMNDSIEVIKKAINNNFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKRTNRRPVILPVVMEVNQNR 558 >gi|295692725|ref|YP_003601335.1| metallo-beta-lactamase superfamily protein [Lactobacillus crispatus ST1] gi|295030831|emb|CBL50310.1| Metallo-beta-lactamase superfamily protein [Lactobacillus crispatus ST1] Length = 596 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 137/563 (24%), Positives = 265/563 (47%), Gaps = 14/563 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ + L GV E G +M + + ++D G+ +P L G+D+V PD+ F + Sbjct: 3 DQIKIMILSGVREHGKDMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFEQ 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + IF+TH H D GAL + +PV+ S +I L + + + K Sbjct: 59 YGDRVAGIFLTHGHADSIGALPYILRKYDIPVFGSQLSIELAKIEVQRENKRRKNSLFHV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A ++D SI HSIP+++ + + +P G IV+TGD+K D A L TD D Sbjct: 119 IDADTEIDFKNASISFFHTTHSIPDSLGIDVHTPAGEIVYTGDFKFDPTAALNYRTDMDR 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L I +G+LAL+ DS+NA SE+ I K + ++ +NAKG ++V +S+++R++ Sbjct: 179 LAEIEQKGVLALLSDSSNAEASFPNASEQDIGKFVTNVFRNAKGRIIVAAKASNLNRVQE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 +++ A G++++L G L ++V ++ +G + + L + + P EQ +++ TG Sbjct: 239 VLNAAAATGKRVLLTGRDLAKIVRTSMKLGYLDVPEGLLMRVKDLNTVPDEQTVILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L ++++ + + + D V ++ E + + + + G VI Sbjct: 299 MGEPLNSLQKMAKKRHSMITIHKGDLVFIATTPSHAVETMVAETSDLVYKAGGTVIQLGR 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 +H SGH DL+ + ++P+ L+ + GE L ++LA++ G+ + +NG Sbjct: 359 N--IHTSGHATGRDLQLLITTLKPKFLIPVIGEYRLLEVVRDLAIKAGMNPKDIYITKNG 416 Query: 420 KMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 L + D V + DG +G ++ + R LS G V +D Sbjct: 417 DCLEYDFKQKRFFLTDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKK 476 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 I P++ G Y ++ + + + + ++ D L++ I L Sbjct: 477 KKIIAEPKVTSRGF-VYIKANRQLMSDSIDVIKKAIQANFEHKKFDWTELKQDIRGDLEK 535 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 L K ++P++ + ++++ R Sbjct: 536 FLYKKTNRRPVILPVVMEVNQNR 558 >gi|306829079|ref|ZP_07462269.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] gi|304428165|gb|EFM31255.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] Length = 553 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 148/560 (26%), Positives = 250/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MNN--ISLTTLGGVRENGKNMYIAEI----DNSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++P G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTEVSFFRTTHSIPESLGVVLKTPKGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG EG+LAL+ DS NA SE + + I + + +G ++V +S++SR Sbjct: 175 FGRLAEIGREGVLALLSDSANADSNIQVASESEVGEEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDVENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGGVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + V D Q D L+ + L Sbjct: 473 REKKIIAKARVHTRGF-VYLKKSRDILRESSELINQIVEDYLQGEDFDWADLKGKVRDGL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 AKYLFDQTKRRPAILPVVME 551 >gi|293364955|ref|ZP_06611672.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307703206|ref|ZP_07640152.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|291316405|gb|EFE56841.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307623281|gb|EFO02272.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] Length = 553 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 248/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ + ++P L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLIINLLQPNYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|289168419|ref|YP_003446688.1| hypothetical protein smi_1586 [Streptococcus mitis B6] gi|288907986|emb|CBJ22826.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 553 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 148/560 (26%), Positives = 255/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P + + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYITEIG----ESIFVLNAGLKYPENEQLGVDVVIPKMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFPTTYSVPESLGIVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA + SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSDIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDTL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|189183276|ref|YP_001937061.1| metallo-beta-lactamase family protein [Orientia tsutsugamushi str. Ikeda] gi|189180047|dbj|BAG39827.1| metallo-beta-lactamase family protein [Orientia tsutsugamushi str. Ikeda] Length = 598 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 202/566 (35%), Positives = 320/566 (56%), Gaps = 12/566 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++LVF+P+GG EIGMN+ +Y Y ++IM+DCG FP D PG +++ D++F Sbjct: 37 IPTDKLVFIPIGGCNEIGMNVNIYHY----QGEFIMVDCGAGFPSDFTPGANMLITDLSF 92 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K L + +THAHEDH G + L L P+Y + F L + + ++ Sbjct: 93 IKASGKKLAGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLLLRLKEYDPTCQVTI 152 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G + ++G F+IE + + HS PE AL+IR+ G I+HTGDWK DDD I+G +DK Sbjct: 153 NKITPGHRFNIGPFAIEMLTLTHSAPEMQALMIRTDAGTILHTGDWKFDDDPIIGKESDK 212 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G+EGI AL+CDSTN G SE ++K++ DI+ +A G ++ TTF+S+++R+ Sbjct: 213 VLLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLIITTTFASNLARL 272 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIAT 299 +S+I A+ GRK++ G SL R++ A D G + L + F YPRE+L++I+T Sbjct: 273 QSLIVAAKHAGRKVIFAGKSLLRMMRAAQDSGYLNDANEQLLDIKEFSKYPREKLMIIST 332 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A+ ++ G +++KL KDTVIFSS+ IPGNE I + N+L V+VI E Sbjct: 333 GCQGEPLAAVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFNQLTRAQVKVITE 392 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + VHVSGHP +LK MY+ RP++ + +HGEP+H+ H LA GI V + NG Sbjct: 393 K-DNFVHVSGHPAIEELKAMYKLTRPKICIPVHGEPIHIHEHANLAKSCGIKNVVELENG 451 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L++ D +I+ ++ DG I KRR++ G + ++ +N + Sbjct: 452 SILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVIATLIFNNRNIL 511 Query: 480 FGVPEIVDIGI----PAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK--LLRESISSA 533 P + G+ P + D L+K + ++ + +K +K + E S Sbjct: 512 AIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSSKKSIKRDKIEEVTKSC 571 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 +R ++K+ K P++ V I+K+ +QR Sbjct: 572 IRRIIKQEVNKNPIIMVNIHKLYQQR 597 >gi|58584726|ref|YP_198299.1| metallo-beta-lactamase superfamily hydrolase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419042|gb|AAW71057.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 544 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 195/556 (35%), Positives = 312/556 (56%), Gaps = 15/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + E +FLPLGGVG IGMN+ LY Y KWIMID G+ F + +PG++L+ D++F Sbjct: 3 INKNEFLFLPLGGVGRIGMNVNLYHY----RGKWIMIDLGIGFADETMPGIELLIADVSF 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +K+L+ I ITHAHEDH GA+ LW L P+Y + F L+ K R+ + Sbjct: 59 IAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSV 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +++ F++E + V HSIPE ++++ + VG+ +HTGDWK D I+G ++ Sbjct: 119 KEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNI 178 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG++G +LA +CDSTN + + SE I NIY+I++ +K V V+ F+S+V+R Sbjct: 179 SRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVAR 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I +I +A+ +GRK+VLLG SL R+V VA + G + F + PRE+L++I T Sbjct: 239 IETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A+++L+ K+ + DTVIFSS+ IPGNE I N +E GV ++ E Sbjct: 299 GCQGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTE 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 EC VH SGHP +L+ MY I+P++ + +HGE +H AH + A + G+ + G Sbjct: 359 KTEC-VHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPG 417 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 ++ L + +D + F DG L+ I R+++ G + V +++ + Sbjct: 418 DIVNLENG--KKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P++ G+ D I + ++K V + + K +R I S + S+LK Sbjct: 476 LAKPKVFAPGVLEAVEDAA-IIQRIIKAVESAF------NLQSTKKVRNKIESLIFSILK 528 Query: 540 KVWGKKPLVTVFINKI 555 + K+P++ V I ++ Sbjct: 529 EYLLKRPIIEVQIEQV 544 >gi|315612728|ref|ZP_07887639.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315314838|gb|EFU62879.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 553 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 248/560 (44%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + ++D G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEI----DGSIFVLDAGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDTVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + R HSIPE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFRTTHSIPESLGIVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE + I + + +G ++V +S++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVGDEITQTIADWEGRIIVAAVASNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ + D A GR++VL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQVFDAAADTGRRVVLTGFDIENIVRTAIRLKKLSLANESLLIKPKEMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V + E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIVTTPSIAKEAVMARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + VSGH DL+ M ++P L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLRVSGHGNARDLQLMINLLQPNYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYEHGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|326803906|ref|YP_004321724.1| hypothetical protein HMPREF9243_1571 [Aerococcus urinae ACS-120-V-Col10a] gi|326651674|gb|AEA01857.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a] Length = 600 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 137/560 (24%), Positives = 259/560 (46%), Gaps = 13/560 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLGGV E G NM L K ++DCG+ FP D++ GVD++ PD T++++ + Sbjct: 4 ISIIPLGGVREDGKNMYLVE----VKDKIFILDCGLIFPPDEMLGVDIMIPDFTYVIEHK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F++H H D GAL L ++VPV+ + I L + V Sbjct: 60 DKVAGVFLSHGHADAIGALPYLLKEVNVPVFGTELTIELAKINCKKRGVKNFKDFYVIDD 119 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 +++D ++ H++PE++ + +++ G+IV+TGD+K D G T + + Sbjct: 120 SNEIDFDDAVVKFFSTTHTVPESLGIAVQTDQGSIVYTGDFKFDLTVGDGYKTSFNRIGE 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 I + G++AL+ DS +A SE+ +++ I + A G V++ T S++ RI+ +++ Sbjct: 180 IASSGVIALLSDSQHADSYFENTSEEKLEQAILKEVDKASGRVVLATVDSNILRIQQVLN 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG--LYPREQLIVIATGSQG 303 +A R + L G ++ ++ VAI + + L + + +++I++ TG G Sbjct: 240 VARATNRHVFLSGDQIEEIIDVAIRLNKLTIPSKNLIQPNDNLKNFADDEIIILETGEYG 299 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E + L +S+G +N+K+ + D V+ +S G E + ++ + G + + Sbjct: 300 EILTNLQAMSKGSHKNIKIQKGDLVLITSSPSVGLETVMADTEDEIYRAGGHALQVLSAY 359 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 SGH P DL+ + P +V + GE L AH ++A G + + G + Sbjct: 360 K--SSGHASPKDLEVLIGLFNPDYVVPVSGEYRLLHAHGKIAQSLGYDDDHIFLLEKGDV 417 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 L+ + + + V L DG +G ++ + RR LS G + + + I Sbjct: 418 LKYEKGKLRLANSVPSENVLVDGSGVGDIGNIVLRDRRILSEDGIFVIVLTISRSQGKIL 477 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSALRSLLK 539 PEI+ G + + + + V V L + D L+ I + L Sbjct: 478 SQPEIISRGF-VFMKESTDLLNASKELVREEVEQALADPKNFDWADLKGKIREVVAKYLY 536 Query: 540 KVWGKKPLVTVFINKISRQR 559 K ++P+V I + S +R Sbjct: 537 KETNRRPMVLPVIMESSHRR 556 >gi|303260105|ref|ZP_07346078.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP-BS293] gi|303261289|ref|ZP_07347237.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS292] gi|303263954|ref|ZP_07349875.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS397] gi|303265944|ref|ZP_07351840.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS457] gi|303268327|ref|ZP_07354124.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS458] gi|302637423|gb|EFL67910.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS292] gi|302638800|gb|EFL69262.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP-BS293] gi|302642165|gb|EFL72515.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS458] gi|302644528|gb|EFL74779.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS457] gi|302646359|gb|EFL76585.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS397] Length = 553 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 148/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P + + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNAGLKYPENEQLGVDVVIPKMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDEDTEIDFGGTVVSFFPTTYSVPESLGIVLKTAEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNARDLQLMINLLQPKYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|315453545|ref|YP_004073815.1| putative metallo-beta-lactamase [Helicobacter felis ATCC 49179] gi|315132597|emb|CBY83225.1| Putative metallo-beta-lactamase [Helicobacter felis ATCC 49179] Length = 583 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 162/555 (29%), Positives = 287/555 (51%), Gaps = 12/555 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + PLGG+GEIG NM + + + I+ID G+SFP +D+ GVD++ PD ++ Sbjct: 33 KARVKITPLGGLGEIGGNMMVIE----TMHQAIIIDVGMSFPSEDMHGVDILIPDFNYLH 88 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCI 121 + ++ + ITHAHEDH GA+ L+ L P+Y +P ++G++ K + K K Sbjct: 89 SIKDKIVGVLITHAHEDHIGAVPYLFKELQFPLYGTPLSLGMIGNKFDEHGLKKFKSFFK 148 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 Q + +G F +E + + HSI + AL I++ VG I+HTGD+K+D + TD Sbjct: 149 IVQKRQPIQIGEFIVEWIHITHSIIDASALAIQTKVGTIIHTGDFKIDHTPVDNLPTDLY 208 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L G +G++ L+ DSTN+ + G SE + ++ K+A+G V+++TFSS++ R+ Sbjct: 209 RLAHYGEQGVMLLLSDSTNSYKPGITPSETSVGPVFENLFKSAQGRVIMSTFSSNIHRVY 268 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ ++G S+++ + +A ++G I ++F+ P ++ ++ TG Sbjct: 269 QAIQHALNHNRKVAVIGRSMEKNLDIARELGYIHLPSKVFIEAHEVEKLPDHEVFIVTTG 328 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGE SAL +++ E R++ + D VI S++AIPGNE ++ I N L+++ +V+ Sbjct: 329 SQGETMSALYRMATDEHRHISIKPSDLVIISAKAIPGNEASVSSILNLLMKKDAQVVHHA 388 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRN 418 + +HVSGH + K M + I+P+ + +HGE H+ HKE A+ GI + + + Sbjct: 389 FD--IHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVAKHKETAMACGIPEKNIYLMED 446 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G + + P+ + + + G D + +R +++ G LS + + Sbjct: 447 GDQVEVNPNFMRKVKSIKSGKHYVDNTNNVSIEQKIVDERLEIASAGLLSAVLFISKEGQ 506 Query: 479 -IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + +I +GI + + L ++ + L Q + K L ES+ LR Sbjct: 507 SLMPHSKISSVGIVNLKEER-HFLEDLQDSLGLHIKALRQDVLGNNKSLDESVRHFLRKA 565 Query: 538 LKKVWGKKPLVTVFI 552 L K K P + + Sbjct: 566 LFKHTKKYPAIVSHV 580 >gi|88608757|ref|YP_506699.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600926|gb|ABD46394.1| metallo-beta-lactamase family, beta-CASP subfamily [Neorickettsia sennetsu str. Miyayama] Length = 542 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 194/558 (34%), Positives = 310/558 (55%), Gaps = 19/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L+FLPLGG GEIGMN+ LYGY +WIMIDCG F +LPG+D+V DI+F Sbjct: 1 MTDNNLIFLPLGGTGEIGMNVTLYGY----KGRWIMIDCGAGFADAELPGIDIVVADISF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + + +L+AI ITH HEDH GAL LW L VPVY + F L K ++V + P Sbjct: 57 IEERKDDLLAIIITHIHEDHCGALPYLWDRLAVPVYTTQFTANFLLKKIGRDKV--QFPI 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G + +G F++E + + HS+PE A+ I + ++H+GDWK+DDD ++G D Sbjct: 115 HVVEPGKLLHLGDFTLEFINMTHSVPEMNAIAIHTADKVVIHSGDWKIDDDPVVGKTCDF 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L + +G+LA++CDSTN G SE +++ + +++ +A G +VT FSS+++RI Sbjct: 175 KRLEELSEKGVLAMVCDSTNVFSHGRSDSESSLREPLMEVISSASGACVVTLFSSNIARI 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ--LIVIA 298 ++ IA + G+ +V+LG SL V+S A + G +K ++ + Y + LI++A Sbjct: 235 ETVTRIANEYGKTVVVLGRSLLSVISAAKETGYLKDLN-YIDEIGLAHYSGSRKSLIILA 293 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QG+ +A+ +LS+G + + DT+IFSS+ IPGNE I + NR + GV V+ Sbjct: 294 TGCQGDELAAVNRLSQGTHNSFAINADDTIIFSSKMIPGNEKRIAKMINRFIAVGVNVVT 353 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 E VHVSGHPY ++LK++YQ ++P++L+ +HGE LHL H + AL+ G+ + Sbjct: 354 ERTHS-VHVSGHPYRDELKQLYQLLKPKILIPVHGENLHLHEHAKFALECGVESALIAMD 412 Query: 419 GKMLRLFP-DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G ++ + +D+ G + D + I RR+L G + V ++++ Sbjct: 413 GDIIEISSTSGARKVDQTEVGFWCVDNDRLQHPDSHVIKTRRKLQLSGMILVILVMNKKG 472 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P IV G Y +GG + + L + D + + +++ +R Sbjct: 473 KSLKRPTIVSFG---YSEEGG----WKENALASIERSLKTGKNSDFRAVTKTVRKIVRGS 525 Query: 538 LKKVWGKKPLVTVFINKI 555 L K PL+ V I ++ Sbjct: 526 LASRI-KIPLIEVQIERV 542 >gi|148284744|ref|YP_001248834.1| metallo-beta-lactamase family protein [Orientia tsutsugamushi str. Boryong] gi|146740183|emb|CAM80431.1| metallo-beta-lactamase family protein [Orientia tsutsugamushi str. Boryong] Length = 578 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 200/566 (35%), Positives = 321/566 (56%), Gaps = 12/566 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ ++LVF+P+GG EIGMN+ +Y Y ++IM+DCG FP D PG +++ D++F Sbjct: 17 IQTDKLVFIPIGGCNEIGMNVNIYHY----QGEFIMVDCGAGFPSDFTPGANMLITDLSF 72 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K L + +THAHEDH G + L L P+Y + F L + + ++ Sbjct: 73 IKASGKKLAGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLRLKEYDPTCQVTI 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G + ++G F+IE + + HS PE AL+IR+ G I+HTGDWK DDD I+G +DK Sbjct: 133 NKITPGHRFNIGPFAIEMLTLTHSAPEMQALMIRTDAGTILHTGDWKFDDDPIIGKESDK 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G+EGI AL+CDSTN G SE ++K++ DI+ +A G ++ TTF+S+++R+ Sbjct: 193 ALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLIITTTFASNLARL 252 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIAT 299 +S+I A+ GRK++L G SL R++ A D + L + F YPRE+L++I+T Sbjct: 253 QSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFSKYPREKLMIIST 312 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G QGEP +A+ ++ G +++KL KDTVIFSS+ IPGNE I + N+L V+VI E Sbjct: 313 GCQGEPLAAVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFNQLTRAQVKVITE 372 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + VHVSGHP +LK MY+ RP++ + +HGEP+H+ H LA GI V + NG Sbjct: 373 K-DNFVHVSGHPAIEELKAMYKLTRPKICIPVHGEPIHIHEHANLAKSCGIKNVVELENG 431 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNI 479 +L++ D +I+ ++ DG I KRR++ G + ++ +N + Sbjct: 432 SILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVIATLIFNNRNIL 491 Query: 480 FGVPEIVDIGI----PAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK--LLRESISSA 533 P + G+ P + D L+K + ++ + ++ +K + E S Sbjct: 492 AIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIKRDKIEEVTKSC 551 Query: 534 LRSLLKKVWGKKPLVTVFINKISRQR 559 +R ++K+ K P++ V I+K+ +Q+ Sbjct: 552 IRRIIKQEVNKNPIIMVNIHKLYQQK 577 >gi|73666790|ref|YP_302806.1| Beta-lactamase-like [Ehrlichia canis str. Jake] gi|72393931|gb|AAZ68208.1| Beta-lactamase-like protein [Ehrlichia canis str. Jake] Length = 544 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 197/556 (35%), Positives = 317/556 (57%), Gaps = 16/556 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++L+F+PLGGVG+IGMN+ LY KWI+ID G F D++PG+D++ DI+F Sbjct: 5 MNTKDLLFVPLGGVGQIGMNVNLYH----LDGKWIIIDFGAGFADDNMPGIDMIVADISF 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I K RKNL+ I +THAHEDH G + LWS L P+YA+ F LL+AK ++ K+ Sbjct: 61 IKKNRKNLLGIVLTHAHEDHIGGIQYLWSDLQCPIYATKFTSALLQAKLKEYQL--KVNI 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ +G FS+E + + HSIPE A+ + + G IVHTGDWKLDD+ I+G +++ Sbjct: 119 TEIDITKRLKLGPFSLEFINLTHSIPEMNAIALHTEKGVIVHTGDWKLDDNPIIGPISNT 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L +G+EG+LAL+CDSTN + SE +++++++I+K+ K V V+ F+S+++RI Sbjct: 179 QRLKELGDEGVLALVCDSTNIFTKNKSGSEGDLEESLFNIIKDCKQKVAVSLFASNIARI 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 ++I+ IAE++GRK+V+LG SL R+ A G ++ F+ PR Q++++ TG Sbjct: 239 QTIVHIAEKLGRKVVILGKSLVRITQAAQGSGYLQDISQFIDINQANKLPRNQVLLLCTG 298 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGE +A A+L+ KL DT+IFSS+ IPGNE I + N+ + GV VI E Sbjct: 299 CQGEALAATAKLANNSHSLTKLEHGDTIIFSSKIIPGNEKRIYSVFNKFINMGVNVITEF 358 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 E VHVSGHP ++ MY IRP++ + +HGE +H+ H ++A Q + V G Sbjct: 359 MEY-VHVSGHPSKIEVSTMYSLIRPKLSIPVHGEYIHMHEHAKVAEQCNVEKAIIVHPGD 417 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 ++ + + ++ V G F DG + I+ R+++ G + V ++L+N + Sbjct: 418 VINIIKK--QKVNSVKAGYFGVDGNFLHHPQGNVISMRKRMRDSGIIIVTLVLNNKKALL 475 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P I G+ + + K+L K K + +++ + + + + LK Sbjct: 476 KEPRIFAPGVLDHSDNQAITKKILSKI-------SSDLYSKKINNIKQHVENIVFNALKY 528 Query: 541 VWGKKPLVTVFINKIS 556 KP + V + I+ Sbjct: 529 DIKNKPFIEVQLEYIN 544 >gi|254526119|ref|ZP_05138171.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] gi|221537543|gb|EEE39996.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] Length = 657 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 280/558 (50%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG I+ID G++FP D + GV++V PD T++ Sbjct: 22 LKIIPLGGLHEIGKNTCVFEYG----DDIILIDGGLAFPSDGMHGVNVVMPDTTYLQANL 77 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +TH HEDH G + +P +Y P A+ +L+ K V+ + + + Sbjct: 78 HRFRGMIVTHGHEDHIGGISHHLKKFRIPVIYGPPLAMSMLKGKMEEAGVADRTTIQTIE 137 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V +G FSIE +R HSI ++ +L + +PVG + TGD+K D D + + Sbjct: 138 PRQVVKLGQNFSIEFIRNTHSIGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERM 197 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTN+ +G SE + N+ ++ AKG V++TTF+SS R+ + Sbjct: 198 VYYGEKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRLISEAKGRVMLTTFASSTHRVAMV 257 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I +A + GRKI L+G S+ VV ++G IK D LF +S P + +++ TGSQ Sbjct: 258 IQLAIKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ 317 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++ R E +VKL DTVIFSS IPGN +++ H ++L++ G VI E Sbjct: 318 GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVVHSIDKLIKLGANVIYGK-E 376 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH +D + M I+P+ V +HGE V H + A+ G+ V + NG Sbjct: 377 HGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGKTAVSMGVDPNNVLILDNGD 436 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + L D + + V G+ + D + +R+QL+ G ++V + N+ Sbjct: 437 TIELRADSMIQGEPVKSGIEMLDNTRTCVVDARALKERQQLADDGIVTVLAPISTDGNMV 496 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + P D ++ I Sbjct: 497 APPRVSLRGVVI-SADPRKMSMWTEREISWVLANRWKQLSRQTGPNNFEVDWIGVQREIE 555 Query: 532 SALRSLLKKVWGKKPLVT 549 + L +++ +PL+ Sbjct: 556 NGLSRRMRRELQVEPLIL 573 >gi|77407803|ref|ZP_00784556.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|77173550|gb|EAO76666.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] Length = 553 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIIALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|162450884|ref|YP_001613251.1| hypothetical protein sce2612 [Sorangium cellulosum 'So ce 56'] gi|161161466|emb|CAN92771.1| hypothetical protein sce2612 [Sorangium cellulosum 'So ce 56'] Length = 532 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 169/537 (31%), Positives = 286/537 (53%), Gaps = 13/537 (2%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 MN L + +++DCGV FP D + GV++ PD++++ + + A+ +TH HE Sbjct: 1 MNAMLIE----EEGRRVLVDCGVMFPNDQVLGVEVAIPDLSYVRE-AGGVDAVLLTHGHE 55 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH G L L VPV+ + F + L+ + + +P + G F E Sbjct: 56 DHIGGLPSLLREFPVPVFGTRFTLRLVRERLAEHGI--DVPLREVEPQQHFAAGPFRAEP 113 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 +RV HSIP+ + I + G ++HTGD+K+D + G+ D G G+ AL+ DS Sbjct: 114 LRVTHSIPDAVGYAIETGEGILIHTGDYKIDLTPVAGERLDLGRFAEYGRAGVAALLSDS 173 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 TN+ R+G +SE + + + AKG +LV F+S+V R++S++D+A Q+GRK+VL G Sbjct: 174 TNSERDGWSVSETAVAEGFTRRFREAKGRILVALFASNVHRVQSVLDLAAQLGRKVVLAG 233 Query: 259 SSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 SL +A ++GI++ + + D + P E+L+V+A+G+QGEP SALA+++ G+ Sbjct: 234 RSLATNTRIAEEIGILRVPPGVLVDDATAASLPPERLVVLASGAQGEPNSALARMAMGDH 293 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ DTVIFSSRAIPGNE+A+ + NRL ++G V+ + P+H SGH + K Sbjct: 294 HRLRVDPGDTVIFSSRAIPGNEIAVSQLANRLAKRGAVVLDRGLD-PIHASGHAQAEEQK 352 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFPDPIEIIDEV 435 + +RP+ V IHGE L+AH AL+ G+ V V +G L L + + + V Sbjct: 353 VLLDAVRPEHFVPIHGEYRMLLAHARTALRMGVPASGVFVVEDGDSLILEDGRMRLGETV 412 Query: 436 VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDIGIPAYD 494 G D ++L + +R Q+S G + V V+ D I P+++ G+ ++ Sbjct: 413 KSGRVWLDARGGLDVSELVLREREQISDQGLVMVLVVADRKTGEILRGPDLLGRGVAHFE 472 Query: 495 GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVF 551 +GG ++ L + + L R L +++S +R + ++ ++P V Sbjct: 473 -EGGPLYAAALDSARDALAALSPAARTLAPALEDALSRGVRRVFRREASRRPAVLPL 528 >gi|77412794|ref|ZP_00788999.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77161090|gb|EAO72196.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] Length = 553 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNDQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|254797166|ref|YP_003082006.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia risticii str. Illinois] gi|254590406|gb|ACT69768.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia risticii str. Illinois] Length = 542 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 197/558 (35%), Positives = 312/558 (55%), Gaps = 19/558 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L+FLPLGG GEIGMN+ LYGY +WIMIDCG F +LPG+D+V DI+F Sbjct: 1 MTDNNLIFLPLGGTGEIGMNVTLYGY----KGQWIMIDCGAGFADAELPGIDIVVADISF 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + + +L+AI ITH HEDH GAL LW L VPVY + F L K ++V + P Sbjct: 57 IEERKDDLLAIIITHIHEDHCGALPYLWDRLAVPVYTTQFTANFLLKKIGRDKV--QFPI 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + G + +G F++E + + HS+PE A+ I + ++H+GDWK+DDD ++G D Sbjct: 115 HVVEPGKLLHLGDFTLEFINMTHSVPEMNAIAIHTADKVVIHSGDWKIDDDPVVGKTCDF 174 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L + +G+LA++CDSTN +G SE +++ + +I+ NA G +VT FSS+++RI Sbjct: 175 KRLEELSEKGVLAMVCDSTNVFSQGRSESESSLREPLREIISNASGACVVTLFSSNIARI 234 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVIA 298 ++ IA + + +V+LG SL V+S A + G +K ++ + Y RE LI++A Sbjct: 235 ETVTRIANEYRKTVVVLGRSLLSVISAAKETGYLKDLN-YIDEIGLAHYSGSRESLIILA 293 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG QG+ +A+ +LS+G + + DT+IFSS+ IPGNE I + NR + GV V+ Sbjct: 294 TGCQGDELAAVNRLSQGTHNSFTINADDTIIFSSKMIPGNEKRIAKMINRFIAMGVNVVT 353 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 E VHVSGHPY ++LK++YQ ++P++L+ +HGE LHL H + AL+ G+ + Sbjct: 354 ERTHS-VHVSGHPYRDELKQLYQLLKPKILIPVHGENLHLHEHAKFALECGVESALIATD 412 Query: 419 GKMLRLFP-DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 G ++ + +D+ G + D + I RR+L G + V ++++ Sbjct: 413 GDIIEISSTSGARKVDQTEVGFWCVDNDRLQHPDSHIIKTRRKLQLSGMILVILVMNKKG 472 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 P IV +G Y +GG + + L + D + + +++ +R Sbjct: 473 KSLKRPTIVALG---YSEEGG----WKENALASIERSLKTDKNSDFRTVTKAVRKIVRGS 525 Query: 538 LKKVWGKKPLVTVFINKI 555 L K PL+ V I ++ Sbjct: 526 LASRI-KIPLIEVQIERV 542 >gi|22537344|ref|NP_688195.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|22534216|gb|AAN00068.1|AE014246_3 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] Length = 553 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|229822917|ref|ZP_04448987.1| hypothetical protein GCWU000282_00209 [Catonella morbi ATCC 51271] gi|229787730|gb|EEP23844.1| hypothetical protein GCWU000282_00209 [Catonella morbi ATCC 51271] Length = 560 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 141/563 (25%), Positives = 256/563 (45%), Gaps = 15/563 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + +PLGGV E G N+ + + ++DCG+ FP++ L G+D V PD ++ Sbjct: 1 MSN--IKIIPLGGVREAGKNLYVVE----VNESIFVMDCGLVFPEEGLLGIDAVIPDFSY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-P 119 + + ++ IF+TH H D GAL L + PV+ + I L ++ ++ Sbjct: 55 LEENADRVVGIFLTHGHADAVGALPYLLEVIEAPVFGTELTIELASLLAKERGLADRLEN 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ ++ R H+IP+++ +VI++ G+IV+TGD+++D A T Sbjct: 115 FFKIDEEVEIEFEDANVSFFRTTHTIPDSVGIVIQTKEGSIVYTGDFRIDPSAKPLYKTH 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG G+LAL+ DS+ A +S++ I + +NA G V+V S+++R Sbjct: 175 FGRLTDIGESGVLALLADSSEAESHVENVSDQQAADEILETFRNAHGRVIVACVGSNIAR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ--LFLSDESFGLYPREQLIVI 297 ++ ++D A R I + G L +V AI + + F ++ G + ++I++ Sbjct: 235 LQQVMDAAHTSKRTIFVPGGELMDIVDTAIKLDKLIMPSKRTFGQMKNIGKFKDHEIIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP AL +++G R VK+ E D V+F+S E A+ ++ + G +V Sbjct: 295 ETGMSGEPIQALQLMAQGRHRQVKMQEGDLVLFASTPSIAIETAMARTQDMIYRAGAQVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 SGH PN+LK M +++P++++ ++GE A ++A Q G + Sbjct: 355 VLTDSFK--ASGHATPNELKLMINFLQPKIIIPVNGEYRQQAALADIANQLGYEDDQIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 G ++ + EV G L DG +G + + RR LS G + + Sbjct: 413 PSAGDVIEYRKGQFLMTQEVPAGDILVDGNGVGDIGSVVLRDRRILSEDGICVIVATISR 472 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + P+IV G Y + + + + D L+ + + Sbjct: 473 RLKKVLVGPQIVTRGF-IYVKSSIDLIESASDMTLDILDKHLASEEFDWAELKSDLREQV 531 Query: 535 RSLLKKVWGKKPLVTVFINKISR 557 K ++P+V I + S+ Sbjct: 532 SKYFFKETKRRPVVLPIIMEASQ 554 >gi|25011308|ref|NP_735703.1| hypothetical protein gbs1259 [Streptococcus agalactiae NEM316] gi|23095732|emb|CAD46918.1| Unknown [Streptococcus agalactiae NEM316] Length = 553 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNDQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGFVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|157414258|ref|YP_001485124.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9215] gi|157388833|gb|ABV51538.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9215] Length = 657 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 170/558 (30%), Positives = 279/558 (50%), Gaps = 20/558 (3%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +PLGG+ EIG N ++ YG I+ID G++FP D + GV++V PD T++ Sbjct: 22 LKIIPLGGLHEIGKNTCVFEYG----DDIILIDGGLAFPSDGMHGVNVVMPDTTYLQANL 77 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +TH HEDH G + +P +Y P A+ +L+ K V+ + + Sbjct: 78 HRFRGMIVTHGHEDHIGGISHHLKKFRIPVIYGPPLAMSMLKGKMEEAGVADRTTIQIIE 137 Query: 125 AGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V +G FSIE +R HSI ++ +L + +PVG + TGD+K D D + + Sbjct: 138 PRQVVKLGQNFSIEFIRNTHSIGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERM 197 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G +G+L L+ DSTN+ +G SE + N+ ++ AKG V++TTF+SS R+ + Sbjct: 198 VYYGEKGVLCLLSDSTNSEVKGFVPSEISVFPNLDRLISEAKGRVMLTTFASSTHRVAMV 257 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 I +A + GRKI L+G S+ VV ++G IK D LF +S P + +++ TGSQ Sbjct: 258 IQLAIKHGRKIGLMGRSMLNVVGKCRELGYIKCPDDLFFPIKSIRDLPDRETLLLMTGSQ 317 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++ R E +VKL DTVIFSS IPGN +++ H ++L++ G VI E Sbjct: 318 GEVMAALSRIGRDEHPHVKLKTTDTVIFSSSPIPGNTISVVHSIDKLIKLGANVIYGK-E 376 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +HVSGH +D + M I+P+ V +HGE V H + A+ G+ V + NG Sbjct: 377 HGIHVSGHGCRDDQRLMLALIKPKFFVPVHGEYRMQVLHGKTAVSMGVDPNNVLILDNGD 436 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + L D + + V G+ + D + +R+QL+ G ++V + N+ Sbjct: 437 TIELRADSMIQGEPVKSGIEMLDNTRTCVVDARALKERQQLADDGIVTVLAPISTDGNMV 496 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD---------LPQFRRKDLKLLRESIS 531 P + G+ D K+ + + + + P D ++ I Sbjct: 497 APPRVSLRGVVI-SADPRKMSMWTEREISWVLANRWKQLSRQTGPNNFEVDWIGVQREIE 555 Query: 532 SALRSLLKKVWGKKPLVT 549 + L +++ +PL+ Sbjct: 556 NGLSRRMRRELQVEPLIL 573 >gi|225868332|ref|YP_002744280.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701608|emb|CAW98864.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 553 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 143/557 (25%), Positives = 262/557 (47%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+ + GVDLV P++ ++++ Sbjct: 3 DINIIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPETEQLGVDLVIPNLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F++H H D GAL L + + VPV+ S I L + +K+ Sbjct: 59 KDKVQGVFLSHGHADAIGALPYLLAEVPVPVFGSELTIELAKLFVKANNSTKRFKNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE++ +VI + GNIV+TGD+K D + G TD L Sbjct: 119 DSDTEIEFKDGLVSFFKTTHSIPESLGVVIGTDKGNIVYTGDFKFDQASREGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G +++ +S++ RI+ + Sbjct: 179 ADIGKEGVLALLADSANATSNEQTASEAEVGEEMDKVIAHADGRIIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G+ + +V A+ + + ++L + + + +LIV+ G Sbjct: 239 FDSAAAYGRRVVLTGTDAENIVRTALRLKKLVIADEKLLIKPKDMSKFEDHELIVLEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R+V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAIGRHRHVQIKDGDLVYIVTTPSAAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M ++P+ L I GE L AH LA + G+ + ++ G Sbjct: 359 H--LRVSGHANARDLQLMINLVKPKYLFPIQGEYRDLAAHAHLAEEAGMLPENIHIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLDEDGFLHEGAVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + Q D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNTTVGNYLQGDHFDWSELKGSVREELSRFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|169833215|ref|YP_001694091.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|168995717|gb|ACA36329.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] Length = 553 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 149/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++PQ L I GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNARDLQLMINLLQPQYLFPIQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTSMAYENGDFVPAGAVSAGDVLIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVAKARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|319745238|gb|EFV97557.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 553 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 145/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R +++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYIQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|76787057|ref|YP_329886.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76562114|gb|ABA44698.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] Length = 553 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDIMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|77412233|ref|ZP_00788551.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77161702|gb|EAO72695.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] Length = 553 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 146/557 (26%), Positives = 257/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYAVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGS 301 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ TG Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L +++ G R V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNG 419 + VSGH +L+ + ++P+ L I GE L AH LA + + V+ G Sbjct: 359 N--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYN 478 ++ L D V G + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLEKDGFFHSGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I + G Y I + + V TTV D D L+ + + L Sbjct: 477 IISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 ++P + + ++ Sbjct: 536 FDQTKRRPAILPVVMEV 552 >gi|168488297|ref|ZP_02712496.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae SP195] gi|183573069|gb|EDT93597.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae SP195] gi|332074418|gb|EGI84894.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17570] Length = 553 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|85708736|ref|ZP_01039802.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. NAP1] gi|85690270|gb|EAQ30273.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. NAP1] Length = 555 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 207/558 (37%), Positives = 317/558 (56%), Gaps = 20/558 (3%) Query: 1 MKNE-----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 MK EL+FL LGG GEIGMN+ LYG KW+M+D G++F + PGVDLVF Sbjct: 1 MKKNYTPEKELLFLALGGSGEIGMNVNLYG----CDGKWLMVDLGMTFSGGEYPGVDLVF 56 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 D+ FI + K+L+ I +THAHEDH GA+ L VP+YA+PF L+ K + Sbjct: 57 ADLEFIEERTKDLLGIVLTHAHEDHIGAVPYFAGELGVPLYATPFTADLVARKLEEAGLL 116 Query: 116 KKIP-CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 K+ I + + D+G FS+ + + HSI E AL+I +P G + HTGDWKLD+D I+ Sbjct: 117 GKVELNIIEEDHGQFDIGPFSVTYLPLAHSIAEGNALLIDTPYGRVFHTGDWKLDEDPII 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTF 233 G+ T + L AIG EG+LAL+CDSTN SE + K + + + KG VLVTTF Sbjct: 177 GEPTTEAELRAIGEEGVLALVCDSTNVFNPKPSGSEGAVHKGLMEEIALHKGKRVLVTTF 236 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +S+V+R++++ ++A + GR++ + G SL R++ VA D G ++ + ++ PR + Sbjct: 237 ASNVARLQTLGEVARETGRQVCVAGRSLDRIIEVAQDNGYLQDFPETVDFDTAMSLPRGE 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ATG QGEPR+ALA+++ ++L D V+FSSR IPGNE+AIG ++N+L +G Sbjct: 297 VLILATGGQGEPRAALARIADDNHP-LELVPGDVVLFSSRQIPGNEIAIGKMQNQLAAKG 355 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + +I + + +HVSGHP +L+ +Y W++P+VLV +HGE H+ L GI Sbjct: 356 ITMITDR-QSLIHVSGHPGRPELEALYDWLKPEVLVPVHGEIRHMAEQARLGKACGILAG 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +NG ++RL P I EV+ G + DG +I + RR+LSF G + + Sbjct: 415 VVQKNGDVVRLAPGQPGKIAEVLSGRLVLDGDIIAPADGEAVTTRRRLSFEGLVVAVLA- 473 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P + IG+P D D + + + ++ + L D + E+ A Sbjct: 474 --RGQV---PVVEPIGLPL-DEDLPEFIEETQEDILKAIGKLKGRDANDPAAVHEAARLA 527 Query: 534 LRSLLKKVWGKKPLVTVF 551 R ++ GK P V V Sbjct: 528 ARRAARRWSGKNPQVRVI 545 >gi|301793802|emb|CBW36194.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|332204635|gb|EGJ18700.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA47901] Length = 553 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKILSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|148983993|ref|ZP_01817312.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP3-BS71] gi|148998286|ref|ZP_01825755.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|149005723|ref|ZP_01829462.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|168490501|ref|ZP_02714644.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC0288-04] gi|168576488|ref|ZP_02722362.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae MLV-016] gi|194397551|ref|YP_002037271.1| hypothetical protein SPG_0556 [Streptococcus pneumoniae G54] gi|307067228|ref|YP_003876194.1| putative metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae AP200] gi|147755929|gb|EDK62973.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|147762663|gb|EDK69623.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|147924140|gb|EDK75252.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP3-BS71] gi|183574979|gb|EDT95507.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC0288-04] gi|183577703|gb|EDT98231.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae MLV-016] gi|194357218|gb|ACF55666.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|301799658|emb|CBW32218.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] gi|306408765|gb|ADM84192.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pneumoniae AP200] gi|332076446|gb|EGI86909.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41301] gi|332077042|gb|EGI87504.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17545] Length = 553 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|148992280|ref|ZP_01822003.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|237649855|ref|ZP_04524107.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CCRI 1974] gi|237821282|ref|ZP_04597127.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CCRI 1974M2] gi|147928906|gb|EDK79918.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] Length = 553 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMSYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|329724328|gb|EGG60840.1| ribonuclease J 2 [Staphylococcus epidermidis VCU144] Length = 532 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 148/534 (27%), Positives = 264/534 (49%), Gaps = 7/534 (1%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + M+D G+ FP+D++ GVD+V PDI ++++ ++ L IF+TH HE GA+ Sbjct: 2 YIVEVDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYVIENKERLKGIFLTHGHEHAIGAVS 61 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + + PVY S I L++ + KK+ + + ++ HSI Sbjct: 62 YVLEQIDAPVYGSKLTIALVKEAMKARNIKKKVRYYTVNHDSIMRFKNVNVSFFNTTHSI 121 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 P+++ + I + G+IV+TG++K D D + IG+EG+ AL+ DST A + G Sbjct: 122 PDSLGVCIHTSYGSIVYTGEFKFDQSLHGHYAPDLKRMAEIGDEGVFALISDSTEAEKPG 181 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 E I+ ++YD KG ++V+ ++S+ RI+ ++ IA Q+ RK+ LG SL+ Sbjct: 182 YNTPENIIEHHMYDAFAKVKGRLIVSCYASNFVRIQQVLKIASQLNRKVSFLGRSLESSF 241 Query: 266 SVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++A +G L + YP+ ++I+IATG QGEP AL+Q++R + + + + E Sbjct: 242 NIARKMGYFDIPKDLLIPINEVENYPKNEVIIIATGMQGEPVEALSQMARKKHKIMNIEE 301 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 D++ + A EV I N LV G +I +H S H +LK M ++ Sbjct: 302 GDSIFLAITASANMEVIIADTLNELVRAGAHII--PNNKKIHASSHGCMEELKMMLNIMK 359 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ V + GE +AH +LA + G+ + V G ++ + + ++V G L Sbjct: 360 PEYFVPVQGEFKMQIAHAKLAAETGVAPEKIFLVEKGDVISYNGKDMILNEKVQSGNILI 419 Query: 443 DGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIH 501 DG +G ++ + R L+ G V LD + I PEI G Y + ++ Sbjct: 420 DGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGF-VYVRESEELL 478 Query: 502 KLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 K + V V + Q +R + +++++ + LL + ++P++ I++I Sbjct: 479 KEAEEKVRKIVEEGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI 532 >gi|85374144|ref|YP_458206.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter litoralis HTCC2594] gi|84787227|gb|ABC63409.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter litoralis HTCC2594] Length = 549 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 201/561 (35%), Positives = 320/561 (57%), Gaps = 20/561 (3%) Query: 1 MKNE-----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 MK + EL+FL LGG GEIGMN+ LYG KW+M+D G++F ++ PG +LVF Sbjct: 1 MKKDYTPEDELLFLALGGSGEIGMNVNLYG----CQGKWLMVDLGMTFGANEYPGTELVF 56 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 D+ FI + RK+L+ + +THAHEDH GA+ L VP+YA+PF L+ K + Sbjct: 57 ADLEFIEERRKDLLGVVLTHAHEDHIGAVPYFAEELGVPLYATPFTAELVLRKLEEAGLD 116 Query: 116 KKIP-CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 I I + ++++G F+I + + HSI E AL+I +P G I HTGDWKLD+D I+ Sbjct: 117 TAIEINIIEEDHGEIELGPFTITYLPLAHSIAEGNALLIDTPHGRIFHTGDWKLDEDPII 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTF 233 G+ T ++ L IG+EG+LAL+CDSTN + SE + K + D ++ G VLVTTF Sbjct: 177 GEPTTEEELREIGDEGVLALVCDSTNVFNPKSSGSEGAVYKGLLDEVRKWDGRRVLVTTF 236 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +S+V+R++++ ++A++ GR + + G S++R++ V+ G + + ++ PR Q Sbjct: 237 ASNVARLQTLGEVAKETGRALCVAGRSIERIIDVSKQSGYLADFPELVDWDTAMGLPRGQ 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ATG QGEPR+AL++++ ++L D V+FSSR IPGNE+ IG ++NRL E+G Sbjct: 297 VMILATGGQGEPRAALSRIAEQNHP-IELTSGDVVMFSSRQIPGNEIGIGKVQNRLAERG 355 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + ++ + + +HVSGHP +L +Y W+RP +LV +HGE H+ EGI Sbjct: 356 IVMVTDR-QSMIHVSGHPGRPELAALYGWLRPDILVPVHGEIRHMQEQCRFGKSEGIEHC 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 NG ++RL P + +V G + DG +I I RR+L+F G + V +L Sbjct: 415 TFQSNGDIVRLAPGASGRVAQVHTGRLVLDGDIIVPADGESIVMRRRLAFNGVVMV--VL 472 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 D+ P++ +G+P D D + ++ + L D + E+ A Sbjct: 473 DHKG----GPQVEALGLPL-DEDYADFVEEAQADIVEALRRLKGKAASDRDAVIEAARLA 527 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 R + GK+P V V + + Sbjct: 528 TRRAATRWSGKRPQVKVMLAE 548 >gi|225854145|ref|YP_002735657.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae JJA] gi|225724249|gb|ACO20102.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae JJA] Length = 553 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|15900521|ref|NP_345125.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|15902582|ref|NP_358132.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae R6] gi|111657548|ref|ZP_01408288.1| hypothetical protein SpneT_02001249 [Streptococcus pneumoniae TIGR4] gi|116516084|ref|YP_816034.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae D39] gi|148988978|ref|ZP_01820378.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|149010769|ref|ZP_01832140.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|149021573|ref|ZP_01835628.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168485725|ref|ZP_02710233.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1087-00] gi|168492774|ref|ZP_02716917.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC3059-06] gi|182683543|ref|YP_001835290.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|221231435|ref|YP_002510587.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225858447|ref|YP_002739957.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 70585] gi|225860610|ref|YP_002742119.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229720|ref|ZP_06963401.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255472|ref|ZP_06979058.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502404|ref|YP_003724344.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|303253937|ref|ZP_07340058.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|14972088|gb|AAK74765.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|15458113|gb|AAK99342.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076660|gb|ABJ54380.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae D39] gi|147765250|gb|EDK72179.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|147925475|gb|EDK76552.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|147930269|gb|EDK81254.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|182628877|gb|ACB89825.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|183571254|gb|EDT91782.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1087-00] gi|183577041|gb|EDT97569.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC3059-06] gi|220673895|emb|CAR68401.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225721980|gb|ACO17834.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 70585] gi|225727965|gb|ACO23816.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298237999|gb|ADI69130.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|301801481|emb|CBW34173.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] gi|302599113|gb|EFL66138.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|327390347|gb|EGE88688.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA04375] Length = 553 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|262282623|ref|ZP_06060391.1| metallo-beta-lactamase [Streptococcus sp. 2_1_36FAA] gi|262261914|gb|EEY80612.1| metallo-beta-lactamase [Streptococcus sp. 2_1_36FAA] Length = 553 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 148/557 (26%), Positives = 254/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ Y + ++D G+ +P+++ GVD+V P++ ++ + Sbjct: 3 KVKIIALGGVRENGKNL----YIAEVDESIFVLDAGLKYPENEQLGVDVVIPNMDYLFEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL L + VPV+ S I L + V KK Sbjct: 59 SDRIAGVFLTHGHADAIGALPYLLAETKVPVFGSELTIELAKLFVKNNDVVKKFNDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++ G + R HSIPE++ +VI++ GNIV+TGD+K D A TD L Sbjct: 119 DENTEIEFGNVVVSFFRTTHSIPESLGIVIKTDEGNIVYTGDFKFDQSASQSYATDFGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + I + + G V+V +S++SRI+ + Sbjct: 179 AEIGREGVLALLSDSANADSNVQVASESEVGDEIMHTIGDWDGRVIVAAVASNLSRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 239 FDAAADTGRRVVLTGFDVENIVRTAIRLKKLSLADERLLIKPKEMSKFEDHELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINGLRKMSIGRHRYVEIKEGDLVYIVTTPSIAKEAVVARVENMIYQAGGIVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L I GE L AH A++ GI + + G Sbjct: 359 H--LRVSGHGNARDLQLLLNLLKPQFLFPIQGEYRELDAHARAAMEIGILPERIFIPKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ V G L DG IG ++ + R+ LS G V + ++ Sbjct: 417 TIMEYDRGDFVPAGSVSAGDVLIDGNAIGDVGNIVLRDRKVLSEDGIFIVAISVNRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G + + + + TV D D L+ ++ L L Sbjct: 477 IISKAKVHTRGFIYIKKSRDILIESA-ELINKTVEDYLAKDEFDWSELKGNVRDVLSKYL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|157150494|ref|YP_001450093.1| metallo-beta-lactamase family protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075288|gb|ABV09971.1| metallo-beta-lactamase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 553 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 149/557 (26%), Positives = 254/557 (45%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ Y + ++D G+ +P+++ GVD+V P++ ++ + Sbjct: 3 KVKIIALGGVRENGKNL----YIAEVDESIFVLDAGLKYPENEQLGVDVVIPNMDYLFEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 + +F+TH H D GAL L + VPV+ S I L + V KK Sbjct: 59 SDRIAGVFLTHGHADAIGALPYLLAETKVPVFGSELTIELAKLFVKNNDVVKKFNDFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++ G + R HSIPE++ +VI++ GNIV+TGD+K D A TD L Sbjct: 119 DENTEIEFGNVVVSFFRTTHSIPESLGIVIKTDEGNIVYTGDFKFDQSASQSYATDFGRL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + I + + G V+V +S++SRI+ + Sbjct: 179 AEIGREGVLALLSDSANADSNVQVASESEVGDEIMHTIGDWDGRVIVAAVASNLSRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGS 301 D A GR++VL G ++ +V AI + + ++L + + + +LI++ TG Sbjct: 239 FDAAADTGRRVVLTGFDVENIVRTAIRLKKLSLADERLLIKPKEMSKFEDHELIILETGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 299 MGEPINGLRKMSIGRHRYVEIKEGDLVYIVTTPSIAKEAVVARVENMIYQAGGIVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ + ++PQ L I GE L AH A++ GI + R G Sbjct: 359 H--LRVSGHGNARDLQLLLNLLKPQFLFPIQGEYRELDAHARAAMEIGILPERIFIPRRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ V G L DG IG ++ + R+ LS G V + ++ Sbjct: 417 TIMEYDRGDFVPAGSVSAGDVLIDGNAIGDVGNIVLRDRKVLSEDGIFIVAISVNRREKK 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G + + + + TV D D L+ ++ L L Sbjct: 477 IISKAKVHTRGFIYIKKSRDILIESA-ELINKTVEDYLAKDEFDWSELKGNVRDVLSKYL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|317484613|ref|ZP_07943517.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] gi|316924153|gb|EFV45335.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] Length = 551 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 190/560 (33%), Positives = 308/560 (55%), Gaps = 14/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L PLGG+GEIGMN ++ + +++DCG+ FP D GVD+V P + Sbjct: 1 MTDTFLTITPLGGLGEIGMNCQMW----NTPEGCVLVDCGIMFPDDQQLGVDVVIPPLEP 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIP 119 I+ +R L+ + +TH HEDH GA+ L SF+ VY SP + L+E K + + Sbjct: 57 ILAQRGRLLGVVLTHGHEDHIGAVPWLVSFIKGLKVYGSPMTLALVEHKLRERGLLDRAE 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I+ ++ +G + V+HSIP+ AL + +PVG +VHTGD+K+D+ G TD Sbjct: 117 LITVTPEHELALGGLRFHFIPVSHSIPQGYALAVDTPVGKVVHTGDFKIDEFPSDGVGTD 176 Query: 180 KDSLCAI-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +L + G +G+ L+ DSTNA EG SEK +++ ++I AKG +++T FSS + Sbjct: 177 LPALRSFAGVDGVRLLLSDSTNAESEGHTQSEKVVRETFHEIFSEAKGRIVITLFSSHIE 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+ + D+A + R +V+ G SL + D+G ++ +D++ E+++VIA Sbjct: 237 RIQMVFDMAREFDRAVVVSGRSLVNNIERGRDLGFMRMPPELFTDQTIPDVSPERMVVIA 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL++++ GE R + + E DTVI SSR IPGN A+ + N++ G V Sbjct: 297 TGSQGEPLSALSRIASGEHRQLSIMEGDTVIMSSRVIPGNARAVNRLINQMYRMGADVCH 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + PVHVSGH ++L+ M +RP+ V IHGE HL+ H++LA GIA + Sbjct: 357 DGTR-PVHVSGHGRRDELRTMLDAVRPKFFVPIHGEYRHLIQHRDLARDWGIAPERTFIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 +G+ L L PD I + +++ L DG +G +L + +R+ L G + V ++LD Sbjct: 416 DDGEPLTLLPDTIRLEEKIPADSILVDGKGVGDVGNLVLRERQLLGGDGVVVVVLVLDEE 475 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + P+++ G ++ + + V+ + P+ + L + I S+LR Sbjct: 476 TGEVIHGPDMISKGF-VFEQQFSHLLEDAKCLVLDHLETSPRLG---IPRLGDRIRSSLR 531 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S +KV G+ P+V I ++ Sbjct: 532 SFFRKVVGRDPVVVPVITEV 551 >gi|332202489|gb|EGJ16558.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41317] Length = 553 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFIPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV + Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|311110554|ref|ZP_07711951.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] gi|311065708|gb|EFQ46048.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] Length = 571 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 131/539 (24%), Positives = 237/539 (43%), Gaps = 9/539 (1%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + ++D G+ +P L G+D+V PD+ F + IF+TH H D GAL Sbjct: 2 YAVQVEDEIFIMDAGLKYPDSSLLGIDVVIPDLDFFRDYGDKIAGIFLTHGHADSIGALP 61 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +PV+ S I L + R K A +++ ++ + HS Sbjct: 62 YILRDYDIPVFGSKLTIELAKIAVQRENRRRKNDLFHVIDADTEIEFKNANVSFFKTTHS 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 IP+++ + I + G IV+TGD+K D A G TD L I +G+LAL+ DSTNA Sbjct: 122 IPDSLGIDISTKEGEIVYTGDFKFDPSAKEGFRTDFVRLSEIAQKGVLALLSDSTNAEAN 181 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 + I+K I++I +N +G ++ +S++ R++ I A GR + L G ++ Sbjct: 182 FPNDRQTSIEKYIFNIFENYEGRIIAAAKASNIVRVQEIFQ-AAATGRHVFLTGRDAGKI 240 Query: 265 VSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 V A+ +G + L + + P ++L+++ TG GEP +L +++ R +K+ Sbjct: 241 VYTAMKLGYLNVPKGLLVHSKDLKKIPDKELVILETGRMGEPLKSLQKMATNRHRMIKIK 300 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 + D V ++ E + + + G V + H SGH DL+ + + Sbjct: 301 KGDLVFIATTPSHSVETMVAQTSDMIYRAGGTVKELGRDK--HTSGHATGRDLQLLIDTL 358 Query: 384 RPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 +P+ L+ + GE L HK+LA++ + NG L D V + Sbjct: 359 KPKFLIPVIGEYRLLEIHKDLAIEAGMNKKDIFLPHNGDAYALEKGRFYRTDAVPGEDIM 418 Query: 442 KDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKI 500 DG +G ++ + R LS G V +D I P + G Y + Sbjct: 419 IDGSGVGDVGNIVLRDREVLSDDGVFIAAVTIDRKKKKIISEPRVSTRGF-VYIKANHAL 477 Query: 501 HKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + V + + ++ D L++ + + + L K G++P+V + ++++ R Sbjct: 478 MNGASDVIKEAVNNNFEHKKFDWTELKQDVRNDVEKYLYKQTGRRPVVLPVVMEVNQNR 536 >gi|300871689|ref|YP_003786562.1| metallo-beta-lactamase family protein [Brachyspira pilosicoli 95/1000] gi|300689390|gb|ADK32061.1| metallo-beta-lactamase family protein [Brachyspira pilosicoli 95/1000] Length = 617 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 161/564 (28%), Positives = 282/564 (50%), Gaps = 22/564 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+++ +PLGGV EIGMNM + YG + +++DCG FPK + G+D V PD +++ Sbjct: 3 NNDKIRIIPLGGVQEIGMNMTVIEYG----DEVLIVDCGFMFPKYHMLGIDYVIPDTSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-KKIP 119 KN++ + +TH HEDH GA+ + +Y S L AK + K + Sbjct: 59 ED--KNIVGLVLTHGHEDHIGAIPHFLRKFPDIQIYGSRLTAAFLRAKLNDYKNEYKDVN 116 Query: 120 CISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + +K+ +G F IE +RVNHSIP+ + + I +P+G I+HTGD+K+D + Sbjct: 117 IYELEPRNKIKIGINFDIEFIRVNHSIPDGVGVAITTPLGVIIHTGDFKVDLNPTTDKFI 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D G G+L L+ DSTN + G +SE ++ + + G ++V F+SS+ Sbjct: 177 DLYKFAEYGENGVLLLLADSTNCHKNGFSMSESVVQNTMTPLFAYEDGMIIVAVFASSIE 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+ ++ A+ + + G SL + +A ++G + + + + YPRE+++ I Sbjct: 237 RIQDLVTAAKINNKYVAFSGRSLLKYTKIAQEMGYLNLYDIVIPIDKLNRYPREKIVCIT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP S+L+ ++ +++K+ + D VIFSS IPGNE+++ + N L + G +++ Sbjct: 297 TGTQGEPYSSLSLIAAEAHKHIKVEDGDMVIFSSSVIPGNEMSVTRMINNLYDLGAKMV- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV--PPV 416 + + +HVSGH DLK MY+ ++P+ + IHGE HL++H +L + + Sbjct: 356 GEDKKLLHVSGHASSEDLKLMYRLVKPKYFIPIHGEKRHLISHIKLVEELNGLNSKGFLL 415 Query: 417 RNGKMLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG--HLSVNVLL 473 NG +L + +I + + DG +G D R QLS G +V Sbjct: 416 YNGNVLEIDSSLEAKIAEPIEIRNIYVDGKGVGDLEDSIFFDREQLSLNGVVVANVVAKK 475 Query: 474 DNHYNIFGVPEIVDIGIPAYDGD-------GGKIHKLLLKTVITTVVDLPQFRRKDLKLL 526 + N +I G + ++ K + V L ++ + Sbjct: 476 NKTGNYDINIDIESKGFTYNGAEKSSIITKNEELIKEGKNSATEAVRKLLNRNKRTPSTI 535 Query: 527 RESISSALRSLLKKVWGKKPLVTV 550 + + ALR ++ G++P++ V Sbjct: 536 KYEVREALRKKFIQIIGREPVIFV 559 >gi|168482845|ref|ZP_02707797.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1873-00] gi|172043682|gb|EDT51728.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1873-00] gi|332203771|gb|EGJ17838.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA47368] Length = 553 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 147/560 (26%), Positives = 254/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--IGLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + + TV D Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|225856311|ref|YP_002737822.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae P1031] gi|225725476|gb|ACO21328.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae P1031] Length = 553 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 146/560 (26%), Positives = 253/560 (45%), Gaps = 15/560 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPEHIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I + G Y I + + TV + Q D L+ + L Sbjct: 473 REKKIVARARVHTRGF-VYLKKSRDILHESSELINQTVEEYLQGDDFDWADLKGKVRDNL 531 Query: 535 RSLLKKVWGKKPLVTVFINK 554 L ++P + + + Sbjct: 532 TKYLFDQTKRRPAILPVVME 551 >gi|195978335|ref|YP_002123579.1| metallo-beta-lactamase family protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975040|gb|ACG62566.1| metallo-beta-lactamase family protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 553 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 142/557 (25%), Positives = 260/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+ + GVDLV P + ++++ Sbjct: 3 DINIIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPETEQLGVDLVIPSLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F++H H D GAL L + + VPV+ S I L + +K+ Sbjct: 59 KDKVQGVFLSHGHADAIGALPYLLAEVPVPVFGSELTIELAKLFVKANNSTKRFKNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE++ +VI + GNIV+TGD+K D + G TD L Sbjct: 119 DSDTEIEFKDGLVSFFKTTHSIPESLGVVIGTDKGNIVYTGDFKFDQASREGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G +++ +S++ RI+ + Sbjct: 179 ADIGKEGVLALLADSANATSNEQTASEAEVGEEMDKVIAHADGRIIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGS 301 D A R++VL G+ + +V A+ + + ++L + + + +LIV+ G Sbjct: 239 FDSAAAYSRRVVLTGTDAENIVRTALRLKKLVIADEKLLIKPKDMSKFEDHELIVLEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R+V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAIGRHRHVQIKDGDLVYIVTTPSAAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M ++P+ L I GE L AH LA + G+ + ++ G Sbjct: 359 H--LRVSGHANARDLQLMINLVKPKYLFPIQGEYRDLAAHAHLAEEAGMLPENIHIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLDEDGFLHEGAVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + Q D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNTTVGNYLQGDHFDWSELKSSVREELSRFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|225619706|ref|YP_002720963.1| putative hydrolase [Brachyspira hyodysenteriae WA1] gi|225214525|gb|ACN83259.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Brachyspira hyodysenteriae WA1] Length = 634 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 163/564 (28%), Positives = 284/564 (50%), Gaps = 22/564 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N+++ +PLGGV EIGMNM + YG + +++DCG FP+ + G+D V PD +++ Sbjct: 3 NNDKIRIIPLGGVQEIGMNMTVIEYG----NEVLIVDCGFMFPRYHMLGIDYVIPDTSYL 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-KKIP 119 KN++ + +TH HEDH GA+ +P+Y S + L AK + K Sbjct: 59 ED--KNIIGLILTHGHEDHIGAIPHFLRKFPDIPIYGSRLTLAFLRAKLNDYKNEYKDTK 116 Query: 120 CISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + +K+ +G F IE +RVNHSIP+ + + I +P+G I+HTGD+K+D + Sbjct: 117 LYEVEPRNKIQLGMNFDIEFIRVNHSIPDGVGIAITTPLGVIIHTGDFKIDLNPTTDKFI 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D G G+L ++ DSTN R+G +SE ++ N+ + + G ++V F+SS+ Sbjct: 177 DLYKFAEYGENGVLLMLADSTNCQRDGFSMSESVVQNNMTPLFDYSDGMIIVAVFASSIE 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+ ++ A+ + + G SL + +A D+G + + + + YPRE+++ I Sbjct: 237 RIQDLVTAAKVNNKFVAFSGRSLIKFTKIAQDMGYLNLYDIVIPIDKINRYPREKIVCIT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+QGEP S+L+ ++ +++K+ + D VIFSS IPGNE+A+ + N L + G +++ Sbjct: 297 TGTQGEPYSSLSLIAAEAHKHIKVEDGDMVIFSSSVIPGNEMAVTRMINNLFDLGAKMV- 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV--PPV 416 + + +HVSGH DLK MY+ ++P+ + IHGE HL+ H +L + Sbjct: 356 GEDKKLLHVSGHASSEDLKLMYRLVKPKYFIPIHGEKRHLITHIKLVENLNGLDTKGFLL 415 Query: 417 RNGKMLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG--HLSVNVLL 473 NG +L + +I + + DG +G + R QLS G +V Sbjct: 416 YNGDVLEIDETLEAKITEPIEIRNIYVDGKGVGDLEESIFYDREQLSLNGVVVANVVAKK 475 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKT-------VITTVVDLPQFRRKDLKLL 526 ++ ++ G G+ I + I V L ++ + Sbjct: 476 NSTGQYDIKVDLESKGFTYTGGEKEGIINKTEQLREEGISSAIEAVRKLLNRNKRTPSTI 535 Query: 527 RESISSALRSLLKKVWGKKPLVTV 550 + + ALR ++ G++P++ V Sbjct: 536 KYEVREALRKKFIQIIGREPVIFV 559 >gi|39939119|ref|NP_950885.1| hypothetical protein PAM_633 [Onion yellows phytoplasma OY-M] gi|39722228|dbj|BAD04718.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 563 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 173/559 (30%), Positives = 286/559 (51%), Gaps = 13/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ++ F LGG+GE+G NM ++ ++ ++D G+ F D L GV+ V PD +++ Sbjct: 12 NSDVSFFALGGLGEVGKNMYVF----DIHKQIFIVDSGILFSDDFLLGVNYVIPDYDYLL 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 K ++ +F+TH HEDH G + L + +P ++ S A LLE K + +P I Sbjct: 68 KNESRIVGLFVTHGHEDHIGGIPYLLKKVGIPKIFVSGIAYYLLEHKLAEHKEIGALPKI 127 Query: 122 SFQAGD--KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D ++ +R+NHSIP+T +V + GNI +TGD+K+D + + Sbjct: 128 EKYSHDTKYEFSHQVNVSFIRLNHSIPDTFGIVFNTKYGNIFYTGDFKIDYTPVGPE-AQ 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L I EG+L L+ DSTNA + G SE I +I ++ N +++ TF+S+ R Sbjct: 187 YDKLIKIKQEGVLCLLSDSTNAEQSGLVQSESTIGASINELFVNIADRIIIVTFASNFYR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+ I++ A Q RK+ + G S+++ + + G + + L S ++ +I++ T Sbjct: 247 IKQIVEAAIQTKRKVAVFGRSMEKALEIGKKHGYLNIPEGTLV-TSNNIHKYRDIILLCT 305 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +KL+ KDT+IFSS IPGN+ I I + L ++ V VI Sbjct: 306 GSQGEPLAALSRIANNTHRQIKLSPKDTIIFSSSPIPGNQENINKIFDLLFKKNVNVITH 365 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH NDLK M +P+ + +HGE L+AHK LAL+ GI + + Sbjct: 366 GPLINTHVSGHGNQNDLKLMLSLTKPKYFIPVHGEHRMLIAHKNLALECGIPESNIFILE 425 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG+M+ L P+ I +V G D I + + +RR LS G SV + +D Sbjct: 426 NGQMVNLAPEKAAITQKVNVGNVFIDASGIDDVGNAILKERRSLSEKGLFSVVMSIDLKR 485 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + +P IV G Y D ++ K + + ++ + + L + I L S Sbjct: 486 KKVLNLPTIVSRGF-IYMKDNQEMIKQISYDIKNSIETAIKQDEVQKETLNKIIVDYLAS 544 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + + P++ I + Sbjct: 545 KIYGITLRNPIIIPIILTV 563 >gi|85057381|ref|YP_456297.1| metallo-beta-lactamase superfamily hydrolase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789486|gb|ABC65218.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Aster yellows witches'-broom phytoplasma AYWB] Length = 563 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 170/559 (30%), Positives = 287/559 (51%), Gaps = 13/559 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N ++ F LGG+GE+G NM ++ ++ ++D G+ F D L GV+ V PD +++ Sbjct: 12 NSDVSFFALGGLGEVGKNMYVFEI----HKQIFIVDSGILFSDDFLLGVNYVIPDYDYLL 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 K ++ +F+TH HEDH G + L + +P ++ S A LLE K + +P I Sbjct: 68 KNESRIVGLFVTHGHEDHIGGIPYLLKKVRIPKIFVSGIAYYLLEHKLAEHKEIGTLPKI 127 Query: 122 SFQAGD--KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D ++ +R+NHSIP+T +V + GNI +TGD+K+D + + + Sbjct: 128 EKYSHDTKYEFRHQVNVSFIRLNHSIPDTFGIVFNTKYGNIFYTGDFKIDYTPVGPE-AE 186 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 D L I EG+L L+ DSTNA + G SE I +I ++ N +++ TF+S+ R Sbjct: 187 YDKLIKIKQEGVLCLLSDSTNAEQSGLVQSESTIGDSINELFVNIADRIIIVTFASNFYR 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+ I++ A Q RK+ + G S+++ + + G + + L + ++ +I++ T Sbjct: 247 IKQIVEAAIQTKRKVAVFGRSMEKALEIGKKHGYLNIPEGALV-TNNNIHKYRDIILLCT 305 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ R +KL+ KDT+IFSS IPGN+ I I + L ++ V +I Sbjct: 306 GSQGEPLAALSRMANNTHRQIKLSPKDTIIFSSSPIPGNQENINKIFDLLFKKNVNIITH 365 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 HVSGH NDLK M +P+ + +HGE L+AHK LAL+ GI + + Sbjct: 366 GPLIKTHVSGHGNQNDLKLMLSLTKPKYFIPVHGEHRMLIAHKNLALECGIPESNIFILE 425 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NH 476 NG+M+ L P+ I ++ G D I + + +RR LS G SV + +D Sbjct: 426 NGQMVNLAPEKAAITQKMNVGNIFIDASGIDDVGNSILKERRSLSEKGLFSVVMSIDLKR 485 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 + +P IV G Y D ++ K + + ++ + + L + I L S Sbjct: 486 KKVLNLPTIVSRGF-IYMKDNQEMIKQISYDIKNSIETAIKQDEVQKETLNKIIVDYLAS 544 Query: 537 LLKKVWGKKPLVTVFINKI 555 + + + P++ I + Sbjct: 545 KIYGITLRNPIIIPIILTV 563 >gi|225870733|ref|YP_002746680.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225700137|emb|CAW94263.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 553 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 143/557 (25%), Positives = 260/557 (46%), Gaps = 13/557 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N L + ++D G+ +P+ + GVDLV P + ++++ Sbjct: 3 DINIIALGGVREYGKNFYLVEI----NDSMFILDAGLKYPETEQLGVDLVIPSLDYVIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 + + +F++H H D GAL L + + VPV+ S I L + +K+ Sbjct: 59 KDKVQGVFLSHGHADAIGALPYLLAEVPVPVFGSELTIELAKLFVKANNSTKRFKNFHVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ + + HSIPE++ +VI + GNIV+TGD+K D + G TD L Sbjct: 119 DSDTEIEFKDGLVSFFKTTHSIPESLGVVIGTDKGNIVYTGDFKFDQASREGYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+LAL+ DS NA SE + + + ++ +A G +++ +S++ RI+ + Sbjct: 179 ADIGKEGVLALLADSANATSNEQTASEAEVGEEMDKVIAHADGRIIIAAVASNLVRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGII--KKDQLFLSDESFGLYPREQLIVIATGS 301 D A R++VL G+ + +V A+ + + ++L + + + +LIV+ G Sbjct: 239 FDSAAAYSRRVVLTGTDAENIVRTALRLKKLVIADEKLLIKPKDMSKFEDHELIVLEAGR 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 GEP ++L +++ G R+V++ + D V + E + ++N + + G V Sbjct: 299 MGEPINSLQKMAIGRHRHVQIKDGDLVYIVTTPSAAKEAMVARVENLIYKAGGSVKLITQ 358 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + VSGH DL+ M ++P+ L I GE L AH LA + GI + ++ G Sbjct: 359 H--LRVSGHANARDLQLMINLVKPKYLFPIQGEYRDLAAHAHLAEEAGILPENIHIMKRG 416 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YN 478 ++ L D V + DG IG ++ + R+ LS G V + + Sbjct: 417 DIMVLDEDGFLHEGAVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKR 476 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I ++ G Y I + + V TTV + Q D L+ S+ L L Sbjct: 477 IISKAKVNTRGF-VYVKKSRDILRESAELVNTTVGNYLQGDHFDWSELKGSVREELSRFL 535 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P + + ++ Sbjct: 536 FEQTKRRPAILPVVMEV 552 >gi|255521787|ref|ZP_05389024.1| hypothetical protein LmonocFSL_11277 [Listeria monocytogenes FSL J1-175] Length = 499 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 131/502 (26%), Positives = 237/502 (47%), Gaps = 7/502 (1%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++ + + + A+F+TH HED GAL L + PVY + I L ++ R + Sbjct: 1 FKYLEENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRF 60 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + R H+IP+++ +V+ + G+IV+TGD+K D A G Sbjct: 61 KNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYA 120 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 +D + G +G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ Sbjct: 121 SDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNL 180 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIV 296 R++ ++D + RK+ ++G L+RV +A +G I ++ L + + Y +++ + Sbjct: 181 IRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITI 240 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I TG+ GEP +L +++G + DTV ++ P E + + L + G +V Sbjct: 241 IETGNLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKV 300 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VP 414 + + +SGH DLK M ++P+ V +HGE L++H +LA + G+A V Sbjct: 301 LT--MSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVF 358 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 V G++L D + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 359 IVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLN 418 Query: 475 NHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I PEI+ G Y + + + K V V Q + L++ I Sbjct: 419 RKSKTITSGPEIISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQ 477 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L L + ++P++ I ++ Sbjct: 478 LNRYLFEQTKRRPMILPIIMEV 499 >gi|269959052|ref|YP_003328841.1| putative ribonuclease [Anaplasma centrale str. Israel] gi|269848883|gb|ACZ49527.1| putative ribonuclease [Anaplasma centrale str. Israel] Length = 542 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 192/549 (34%), Positives = 302/549 (55%), Gaps = 17/549 (3%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERK 66 FLPLGGVG+IGMN+ LY + KWI++D G F D +PGVD+V D++FI K+RK Sbjct: 9 FLPLGGVGKIGMNVTLYH----AHGKWIIVDLGSGFADGDTMPGVDMVVADVSFIKKKRK 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L+ I +THAHEDH GA+ LW+ L PVY + F LL+AK +S I + Sbjct: 65 DLLGIVLTHAHEDHIGAIPYLWADLRCPVYTTKFTAALLKAKLAQFSMSVPIEEV--DPA 122 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 K+++G F +E V + HS PE A+ + + G+++HTGDWKLD D ++G V+D + L + Sbjct: 123 SKLELGPFVLEFVHMTHSTPEMHAVAVHTDFGSVLHTGDWKLDTDPVVGPVSDVEKLKRL 182 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G++G+LA++ DSTN EG SE + +NI I+K +K V + F+S+++RI ++ I Sbjct: 183 GDDGLLAVISDSTNIFTEGRSGSEGSLYENILSIVKESKRRVAIALFASNIARIYTLSKI 242 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 AE R++V+LG SL R + A D G + F+ G P ++ + TG QGEP Sbjct: 243 AEASNRQVVVLGRSLARAIQAARDCGYLDDTAEFVDARQAGSIPVHNVLYLCTGCQGEPL 302 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +A A+L+ +L E DTVIFSS+ IPGNE I + N+LV GV V+ E E VH Sbjct: 303 AATARLASRSHPLAELGEGDTVIFSSKIIPGNERRIFGVFNKLVRMGVEVVTEFTEG-VH 361 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGHP +++ +Y RP++ V +HGE +H+ H +LA + GI G ++ L Sbjct: 362 VSGHPSREEVRTLYSLTRPKLCVPVHGEYMHMYEHVKLAKECGIGGCVVSAPGDVIDLVE 421 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIV 486 + + V G+F DG + ++ RR++ G + V +L++ + + P ++ Sbjct: 422 G--KKVGSVGCGMFGIDGNFLRHPEGSVMSARRKMRSAGMVVVTLLMNREHELVKEPMVI 479 Query: 487 DIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 G D ++++ K + ++ + + LK + +P Sbjct: 480 APGALDSSEDRVLLNEMARKI-------GSGLSNSRPRNVKSYVKDVVFGSLKGILKGRP 532 Query: 547 LVTVFINKI 555 LV V + + Sbjct: 533 LVEVQMEYV 541 >gi|75762801|ref|ZP_00742625.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489712|gb|EAO53104.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 466 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 137/451 (30%), Positives = 235/451 (52%), Gaps = 9/451 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +KN+++ LGG+GEIG N + + I+ID G+ FP+D+L G+D V PD T+ Sbjct: 4 LKNDQVAVFALGGLGEIGKNTYAVQF----QDEIIIIDAGIKFPEDELLGIDYVIPDYTY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + +FITH HEDH G + L +++P+Y AI L++ K + +K Sbjct: 60 FVRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q D + S+ R HSIP++ +V+++P G +VHTGD+K D + + D Sbjct: 120 YEIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVG-EPADL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + IG +G+L L+ DSTN+ +SE+ + +I DI + G ++ TF+S++ R+ Sbjct: 179 TKMAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRL 238 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +I+ A + RK+ + G S++ + + ++G I+ F+ P +++++ T Sbjct: 239 QQVIEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R +++ DTV+FSS IPGN +++ N L G VI Sbjct: 299 GSQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHG 358 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 +H SGH + K M + I+P+ + IHGE H +A GI + Sbjct: 359 KL-SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMD 417 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIG 448 NG +L L D + + ++G Sbjct: 418 NGDVLALRSDEASVAGKSHLVRSTLMETVLG 448 >gi|222474901|ref|YP_002563316.1| hypothetical protein AMF_179 [Anaplasma marginale str. Florida] gi|222419037|gb|ACM49060.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 559 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 192/549 (34%), Positives = 301/549 (54%), Gaps = 17/549 (3%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERK 66 FLPLGGVG+IGMN+ LY + KWI++D G F D +PGVD+V D++FI K+RK Sbjct: 26 FLPLGGVGKIGMNVTLYH----AHGKWIIVDLGSGFADGDTMPGVDMVVADVSFIKKKRK 81 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L+ I +THAHEDH GA+ LW+ L PVY + F LL AK + +P Sbjct: 82 DLLGIVLTHAHEDHIGAIPYLWADLRCPVYTTKFTATLLRAKLAQFSM--NVPIEEVDPA 139 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 K+++G F +E V + HS PE A+ + + G+++HTGDWKLD D ++G ++D D L + Sbjct: 140 SKLELGPFVLEFVHMTHSTPEMHAVAVHTDFGSVLHTGDWKLDTDPVVGPMSDTDKLKRL 199 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G++G+LA++ DSTN EG SE + +NI I+K +K V V F+S+++RI ++ I Sbjct: 200 GDDGLLAVISDSTNIFTEGRSGSEGSLYENILSIVKASKRRVAVALFASNIARICTLSKI 259 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 A+ R++V+LG SL R + A D G I FL + G P + ++ + TG QGEP Sbjct: 260 AKASNREVVVLGRSLARAIQAARDCGYIDDSTEFLDAKQAGSIPAKNVLYLCTGCQGEPL 319 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +A A+L+ +L E DTV+FSS+ IPGNE I + N+LV GV V+ E E VH Sbjct: 320 AATARLASKSHPLAELGEGDTVVFSSKIIPGNERRIFGVFNKLVRMGVEVVTEFTEG-VH 378 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGHP +++ +Y RP++ V +HGE +H+ H +LA + GI G ++ L Sbjct: 379 VSGHPSREEVRTLYSLTRPKLCVPVHGEYMHMYEHVKLAKECGIKGCVVSAPGDVIDLVE 438 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIV 486 + + V G+F DG + ++ RR++ G + V +L++ + + P ++ Sbjct: 439 G--KKVGSVGCGVFGIDGNFLRHPEGSVMSARRKMRNAGMVVVTLLMNREHELVKEPMVI 496 Query: 487 DIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 G D + ++ K + ++ + + LK + +P Sbjct: 497 APGALDSSEDRVLLSEMARKI-------GSGLSNSRPRNVKNYVKDVVFGSLKGILKDRP 549 Query: 547 LVTVFINKI 555 LV V + + Sbjct: 550 LVEVQMEYV 558 >gi|313885018|ref|ZP_07818770.1| ribonuclease J 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312619709|gb|EFR31146.1| ribonuclease J 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 561 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 142/557 (25%), Positives = 252/557 (45%), Gaps = 13/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + +PLGGV E G NM + ++DCG+ FP+D++ G+D V PD T++ + Sbjct: 2 NAVKIIPLGGVREEGKNMYVVEI----DEAIYVLDCGLVFPEDEMLGIDAVIPDFTYLEE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCIS 122 ++ ++ IF++H H D GAL L L PV+ + I L + + K + Sbjct: 58 NKERVVGIFLSHGHADAMGALPYLLDTLEAPVFGTDLTIELAKLDAKAAGLGKHLDNFFV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A +++ ++ + H+IPE++ +V+ +P+G IV+TGD+K D A TD Sbjct: 118 IDAETEIEFETSTVSFFKTTHTIPESVGIVLSTPLGAIVYTGDFKFDSSASELYKTDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG +G+LAL+ DS +A S I N+ D N G V++ + S+++RI+ Sbjct: 178 LTDIGEKGVLALLSDSADAEILTNNDSVTTIVGNMADTFMNTPGRVIIASIGSNIARIQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS--DESFGLYPREQLIVIATG 300 +++ A GR + G+ L +++ VAI + I+ + + P +++IV+ TG Sbjct: 238 VLNAAYLSGRTVFFGGNQLMQLIDVAIKLDKIQIPSKDVIGQMKDMTKTPDDKIIVLETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + GEP AL ++ + V L E D V + E + + G V + Sbjct: 298 NVGEPIKALQAMANNRHKTVHLKEGDLVYIGTTPSVAMETTQAKTADMIYRAGASVRSIK 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN-- 418 + VSGH NDL+ M +++P L+ ++GE L AH +LA + + Sbjct: 358 EDA--QVSGHANKNDLQFMLNFLKPHYLIPVNGESRTLHAHAKLAQELAYTDDQILMPVL 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-Y 477 G ++ D + I V G L DG +G ++ + RR LS G V + Sbjct: 416 GDVIEFKQDSVNIAASVPAGDVLVDGSGVGDIGNVVLRDRRILSEDGIFVVVATISRRLK 475 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + P+I G + + + + + + D L+ + + Sbjct: 476 RVLVGPQITSRGF-VFMKTSLDLIEECSDMTLDVLEEHLAKDDFDWGNLKSDLREKIGKY 534 Query: 538 LKKVWGKKPLVTVFINK 554 L K ++P++ I + Sbjct: 535 LFKETKRRPVILPIIME 551 >gi|56416533|ref|YP_153607.1| hypothetical protein AM245 [Anaplasma marginale str. St. Maries] gi|255002873|ref|ZP_05277837.1| hypothetical protein AmarPR_00942 [Anaplasma marginale str. Puerto Rico] gi|255004005|ref|ZP_05278806.1| hypothetical protein AmarV_00987 [Anaplasma marginale str. Virginia] gi|56387765|gb|AAV86352.1| hypothetical protein AM245 [Anaplasma marginale str. St. Maries] Length = 542 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 192/549 (34%), Positives = 301/549 (54%), Gaps = 17/549 (3%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERK 66 FLPLGGVG+IGMN+ LY + KWI++D G F D +PGVD+V D++FI K+RK Sbjct: 9 FLPLGGVGKIGMNVTLYH----AHGKWIIVDLGSGFADGDTMPGVDMVVADVSFIKKKRK 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L+ I +THAHEDH GA+ LW+ L PVY + F LL AK + +P Sbjct: 65 DLLGIVLTHAHEDHIGAIPYLWADLRCPVYTTKFTATLLRAKLAQFSM--NVPIEEVDPA 122 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 K+++G F +E V + HS PE A+ + + G+++HTGDWKLD D ++G ++D D L + Sbjct: 123 SKLELGPFVLEFVHMTHSTPEMHAVAVHTDFGSVLHTGDWKLDTDPVVGPMSDTDKLKRL 182 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 G++G+LA++ DSTN EG SE + +NI I+K +K V V F+S+++RI ++ I Sbjct: 183 GDDGLLAVISDSTNIFTEGRSGSEGSLYENILSIVKASKRRVAVALFASNIARICTLSKI 242 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 A+ R++V+LG SL R + A D G I FL + G P + ++ + TG QGEP Sbjct: 243 AKASNREVVVLGRSLARAIQAARDCGYIDDSTEFLDAKQAGSIPAKNVLYLCTGCQGEPL 302 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 +A A+L+ +L E DTV+FSS+ IPGNE I + N+LV GV V+ E E VH Sbjct: 303 AATARLASKSHPLAELGEGDTVVFSSKIIPGNERRIFGVFNKLVRMGVEVVTEFTEG-VH 361 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGHP +++ +Y RP++ V +HGE +H+ H +LA + GI G ++ L Sbjct: 362 VSGHPSREEVRTLYSLTRPKLCVPVHGEYMHMYEHVKLAKECGIKGCVVSAPGDVIDLVE 421 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIV 486 + + V G+F DG + ++ RR++ G + V +L++ + + P ++ Sbjct: 422 G--KKVGSVGCGVFGIDGNFLRHPEGSVMSARRKMRNAGMVVVTLLMNREHELVKEPMVI 479 Query: 487 DIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKP 546 G D + ++ K + ++ + + LK + +P Sbjct: 480 APGALDSSEDRVLLSEMARKI-------GSGLSNSRPRNVKNYVKDVVFGSLKGILKDRP 532 Query: 547 LVTVFINKI 555 LV V + + Sbjct: 533 LVEVQMEYV 541 >gi|254479117|ref|ZP_05092468.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] gi|214034931|gb|EEB75654.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] Length = 471 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 143/473 (30%), Positives = 252/473 (53%), Gaps = 6/473 (1%) Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 + L+VP+Y + IGL+E K + + I+ + + V++G F +E +R +HSI Sbjct: 1 MLKQLNVPIYGTRLTIGLVEYKLKEHGLLRDSKLITVKPRETVEIGQFKVEFIRTSHSIA 60 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++ AL I +PVG + H+GD+K+D I G+V D +G +G+L ++CDSTN R G Sbjct: 61 DSAALAIHTPVGTVFHSGDFKIDFTPIDGEVPDLHRFAQLGEKGVLVMLCDSTNIERPGY 120 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +SE+ + + ++ + A+ ++V TF+S++ R++ II+ A++ GRK+ + G S+ VV+ Sbjct: 121 TMSERTVGETFDNLFRKAEQRIIVATFASNIHRVQQIINSAQKYGRKVAISGRSMVNVVN 180 Query: 267 VAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 VA+++G + + L + + P ++++I TGSQGEP SAL +++ E + V++ Sbjct: 181 VAMELGYLTVPEGLLIDLDEANKLPHNKVVIITTGSQGEPMSALTRMASSEHKKVEIVPG 240 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 DTVI S+ IPGNE I + N+L ++G VI E +HVSGH ++K ++ I+P Sbjct: 241 DTVIISASPIPGNERLISRVINQLFKKGANVIYEAL-ADIHVSGHACQEEIKLLHTLIKP 299 Query: 386 QVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKD 443 + + +HGE HLV H +LA G+ + V NG +L D I V G L D Sbjct: 300 KFFIPVHGEYRHLVQHAKLAESLGMPPENIFVVDNGTVLEFTKDSGRIAGTVTAGKVLVD 359 Query: 444 GFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHK 502 G +G ++ + R+ L+ G L V V + + P+I+ G Y + + + Sbjct: 360 GLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGAVIAGPDIISRGF-VYVRESEDLME 418 Query: 503 LLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 V + + + ++ I L + L + + P++ I +I Sbjct: 419 ESKNIVREVLAKCEKEEINEWATIKSMIKDNLSNFLYEKTKRNPMILPIIMEI 471 >gi|291288651|ref|YP_003505467.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885811|gb|ADD69511.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 546 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 177/554 (31%), Positives = 287/554 (51%), Gaps = 16/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGGVGEIGMNM +Y + I++DCGV F ++ PG+D V PD ++ K + Sbjct: 4 SISFLGGVGEIGMNMYVYE----TEETAIIVDCGVMFADNNFPGIDYVIPDFEYLDKIKH 59 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 L A+FITH HEDH GA+ L ++PVY ++G+LE KR ++VS + IS Sbjct: 60 KLKALFITHGHEDHVGAVPFLLRSFNMPVYGGKLSLGILEQKRGAKKVSPDLRSIS--PR 117 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 V G F+++ + V HSI +T AL I+ + +H D+K+D G+ + A+ Sbjct: 118 QVVKAGDFTVKFLPVTHSISDTYALYIKCGDFSALHCSDYKIDQSPAGGEPFNPSDFTAL 177 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 EG+ AL+ DSTNA EG SE IK ++ I +NAKG + T+FSS++ R R I+DI Sbjct: 178 AKEGLTALLVDSTNATSEGFTQSESSIKDDLKKIFRNAKGRIFFTSFSSNIDRFRQILDI 237 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A ++GRK+VL G++L R +S+A +G I D L + + P +++ I TG QGE Sbjct: 238 AREVGRKVVLEGTALDRNISIAKSLGYIDLPDDLIVGLRASKKLPDDEICYIITGCQGET 297 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 S L +++ GE +++ + E D + S+R IPGNE + ++ N + + G V+ + + + Sbjct: 298 NSTLYRIASGERKDLHVREGDLFVISARVIPGNEKNLINLVNFIYKAGGNVV-DIGKNRI 356 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI---ACVPPVRNGKML 422 HVSGH ++K M + RP+ ++ +HGEP+H++ K + G+ V V +G+ Sbjct: 357 HVSGHASQEEIKLMVNFTRPKYVIPVHGEPVHMITLKRILKGMGLVAPENVVLVEDGQKA 416 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 + + +D+V HG D + + R+ L G +S+ + + Sbjct: 417 VFENEELAKLDDVPHGKVFIDLRGHFVMDEDSVRDRKHLCRDGAVSIVAIRRKSDGTYIF 476 Query: 483 P-EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKV 541 P + G + LL+ + V D D ++ +S R KK Sbjct: 477 PLTVETAGFELEPEQMTGLQDFLLENLGELVND----DDYDFTDIKGGLSRLTRRFFKKN 532 Query: 542 WGKKPLVTVFINKI 555 ++PLV + +I Sbjct: 533 LDRRPLVIPVVTEI 546 >gi|197294179|ref|YP_001798720.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma australiense] gi|171853506|emb|CAM11346.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma australiense] Length = 562 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 165/550 (30%), Positives = 281/550 (51%), Gaps = 12/550 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ F LGG+GE+G NM ++ G ++ ++D G SF ++ L G++ V PD + Sbjct: 10 LNKLDVSFFALGGLGEVGKNMYVFEIG----KEIFIVDSGFSFSENFLLGINYVIPDYQY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYER-VSKKI 118 + ++ +FITH HEDH G + L +H+P ++ S A LL K + + V Sbjct: 66 LRDNESRIVGLFITHGHEDHIGGIPYLLKKVHIPKIFVSGIAYHLLRYKLLEHKDVGALP 125 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 P +++ A SI +RVNHSIP+T +VI++ GN+ +T D+K+D + Sbjct: 126 PMVNYNADSCYHFQNASISFIRVNHSIPDTFGIVIKTKYGNLFYTSDFKIDYTPVGP-PA 184 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + L I EG+L L+ DSTNA +EG SE I +I ++ +++ TF+S+ Sbjct: 185 EYEKLIKIRQEGVLCLLSDSTNAEQEGVVKSESTIGHSIDELFVQIPDRIIIVTFASNFY 244 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+ I++ RKI + G S+K+ + + G + + L ++ +I++ Sbjct: 245 RIKQIVEATILTKRKIAVFGRSMKKSLEIGQKNGYLNIPEGTLVPS-HNIHKYRDIILLC 303 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP +AL++++ R +KL KDT+IFSS IPGN+ I + L+++ V VI Sbjct: 304 TGSQGEPLAALSRMANNSHRQIKLNYKDTIIFSSSPIPGNQENINKTLDLLLQKNVNVIT 363 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 HVSGH NDLK M I+P+ + +HGE L AHK LA++ I + + Sbjct: 364 HGPLINTHVSGHGNQNDLKLMLTLIQPKYFIPVHGERRMLQAHKNLAVECNISEENIFIL 423 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ + L PD I++ + D + + + +RR LS G +V + +D Sbjct: 424 DNGQRISLIPDEAHIVNTIPMEDVFLDASGMNYLGNSILQERRFLSQEGLFAVVMSIDVK 483 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P IV G Y ++ K + + ++ + D ++L++ I L Sbjct: 484 KKQILSSPTIVSRGF-IYMKSNQELIKKISLDIKNSIEKAIKNNEVDKEVLKKIIIDYLS 542 Query: 536 SLLKKVWGKK 545 + + ++ +K Sbjct: 543 TKIYQMTFRK 552 >gi|256371450|ref|YP_003109274.1| beta-lactamase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008034|gb|ACU53601.1| beta-lactamase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 551 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 173/563 (30%), Positives = 275/563 (48%), Gaps = 19/563 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M EL LGG+GEIG N AL + ++ID GV FPK D+PGVDLV P++ Sbjct: 1 MSRPELHIRFLGGLGEIGRNAALV----SVDGRGVLIDFGVMFPKADMPGVDLVLPNLAG 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L A+ +TH HEDH G L L + VPV+ S +G + + + + Sbjct: 57 LDDVE--LEAVIVTHGHEDHIGGLPFLLAEHRVPVWGSEVTLGFVRNRLREHDLG-DVDL 113 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 G +V VG+F E++ V HSIP +A+ + +P G ++HTGD+K+D + G Sbjct: 114 RILADGARVSVGSFEAEAIPVTHSIPGAVAVALTTPAGVVLHTGDFKIDHTPLDGRHMGL 173 Query: 181 DSLCAIG-NEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVS 238 + A+G + GI L+ DSTNA +G SE+ + + D+ ++ V+V FSS + Sbjct: 174 ARIAALGSDPGIRVLLSDSTNADEDGYARSERAVGPALEDLFNRHGAARVIVACFSSHLH 233 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIV 296 RI+ + +A + GR++VLLG SL+R V + ID+G++ + L + V Sbjct: 234 RIQQVATLAREHGRRLVLLGRSLQRNVQLGIDLGLLDARLFERTLDPREVRELDPASVAV 293 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 IATGSQGE +AL L+ R + D V+FSS IPGNE A+ + N+ G V Sbjct: 294 IATGSQGERMAALHHLAFDPARWFAVGGDDVVVFSSDVIPGNEAAVNLLVNQFTRLGATV 353 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + E VH +GH +L + + RP V +HGE HL AH LA + G + Sbjct: 354 VTSARE-LVHATGHAKQEELALVVELARPDYFVPVHGEYRHLSAHAALAQRTGAVGRGVI 412 Query: 417 RNGKMLR--LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + D E+ D D ++G + + +RR LS G + V V L Sbjct: 413 LARDGAEVVIGDDGAELADTPWGEYLYVD-GVVGDVSRGVLRERRNLSEEGVVIVGVTLG 471 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 G PE+ +G + + ++ + ++ + D + + + E I + + Sbjct: 472 PDGVALGEPELTSVGWIHDERE-EELLAEVRAMLVGALGD---EKPRSEDAVAELIRTRV 527 Query: 535 RSLLKKVWGKKPLVTVFINKISR 557 R+L+++ ++PLV + +I Sbjct: 528 RALVRERTRRRPLVVPMVTRIDE 550 >gi|194246609|ref|YP_002004248.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Candidatus Phytoplasma mali] gi|193806966|emb|CAP18398.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Candidatus Phytoplasma mali] Length = 564 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 158/562 (28%), Positives = 286/562 (50%), Gaps = 14/562 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ ++ F LGG+GE+G NM ++ + ++D G+ F ++ L GV+ V P+ + Sbjct: 10 LQDFDIFFCALGGLGEVGKNMYIFEI----EKNIFIVDAGILFSENILFGVNYVIPNYEY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYER--VSKK 117 +++ ++ +F+TH HEDH G + L + +P ++ S A LLE K + ++ Sbjct: 66 LLENESRIIGLFVTHGHEDHIGGIPYLLKKVKIPKIFVSGIAYDLLEVKLSEHKDIINNL 125 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + K G I VR+NHSIP+ ++ ++ GN+ +TGD+K+D + V Sbjct: 126 TKMEKYNNNSKYKFGNTEISFVRLNHSIPDMFGIIFKTKNGNVFYTGDFKIDHTPVGP-V 184 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + + L I EG+L L+ DSTNA +E SE I +I D+ G +++ TF+S++ Sbjct: 185 AEYEKLTEIQKEGVLCLLSDSTNAEKEEFIQSESKIGASINDLFSQITGRIIIVTFASNL 244 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 RI+ II+ RK+ + G S+++ + + G K + + + + ++ Sbjct: 245 YRIKQIIESTIFTKRKLAVFGRSMEKTIETGKNNGYFKISNDLIVNNNIIN-KYNDITLL 303 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGEP +AL++++ + +KL + DTVIFSS IPGN+ +I I + L++ + +I Sbjct: 304 CTGSQGEPLAALSRIANNTHKQIKLNQGDTVIFSSSPIPGNQDSINKIIDLLLKIDINII 363 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 H SGH NDLK + ++P+ + +HGE L H++LA+ G+ + Sbjct: 364 THGPLINTHTSGHGSQNDLKLILSLVKPKYFIPVHGEHRMLTKHRQLAIDCGVLPENILV 423 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIG-KFADLGIAKRRQLSFVGHLSVNVLLD 474 + NG+++ L ++++ + G DG IG +L + +RR LS G LSV V +D Sbjct: 424 LDNGQLVGLNDQEMKLLGRLPSGNIQIDGSGIGDDIGNLILKERRTLSEEGLLSVIVTID 483 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + P I+ G Y K+ + + + V + Q + L++ I Sbjct: 484 YKKKKVLNFPMIISRGF-IYMKGNQKLIRKISLEIKKKVEEKIQKQEIIKLSLKKIIIDY 542 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 L S + ++ + P++ I I Sbjct: 543 LTSYIYELTLRNPIIVPIILNI 564 >gi|94987003|ref|YP_594936.1| metallo-beta-lactamase superfamily hydrolase [Lawsonia intracellularis PHE/MN1-00] gi|94731252|emb|CAJ54615.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Lawsonia intracellularis PHE/MN1-00] Length = 551 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 181/550 (32%), Positives = 296/550 (53%), Gaps = 14/550 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK+E L PLGG+ EIG+N L+ +S+ ++IDCG+ FP + G+D++ P I Sbjct: 1 MKDEFLTITPLGGLEEIGLNCQLWE----TSKGVVLIDCGIMFPNEQHLGIDVIIPPIDP 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 I+ + L+ + +TH HEDH GA+ L F+ + +Y SPF + L+E K + Sbjct: 57 ILHVKNRLLGVVLTHGHEDHIGAIPWLVCFIPGLKIYGSPFTLALVEHKLKERNLLSSAQ 116 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I+ K+++G + + V+HSIP++ AL + +PVG I+H+GD+K+D G TD Sbjct: 117 LIAVTPKTKLNLGNLYFQFISVSHSIPQSYALAVTTPVGKIIHSGDFKIDPTPSDGIGTD 176 Query: 180 KDSLCAI-GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 S+ GN+GI + DSTNA +G +SE+ IKKN Y+I AKG ++VT F+S++ Sbjct: 177 LQSIKEFAGNDGIRLFLSDSTNADEQGHNLSEQYIKKNFYEIFSEAKGRIIVTLFASNIE 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 RI+++ D+ + +K+V+ G SL + A ++G + F +D++ EQ ++I Sbjct: 237 RIQTVCDLVKVFNKKLVVTGRSLINNIEKAKELGFLNIPYKFFTDQNVPDLSPEQTVIIT 296 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGEP SAL ++ GE R + + E DTVI SSR +P + +A+ + NR+ G V Sbjct: 297 TGSQGEPLSALVRIISGEHRYLSIHEGDTVIMSSRVLPNSTLAVNRLINRIYRLGATVCL 356 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 + +HVSGH ++LK + + PQ V IHGE L HKELA+Q GI + + Sbjct: 357 NGQKA-IHVSGHARQDELKILLTVVNPQYFVPIHGEYRQLFRHKELAMQHGIPSENIFIL 415 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 +G+ L L P + ++ L DG IG + R+ L G + V++ D Sbjct: 416 DDGEPLTLLPTKVRKEKKIPLKSILIDGKGIGDVDSSVLRDRQLLGGDGVVVVSLTRDKG 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 ++ P I+ G+ ++ + + + VI + + L + I ++L Sbjct: 476 TGSVMQGPSILSRGL-IFEKKLNCLIEEAKQVVIEILQS---DLTLTTQKLEKKICTSLH 531 Query: 536 SLLKKVWGKK 545 S + V G++ Sbjct: 532 SFFRNVIGRE 541 >gi|296283856|ref|ZP_06861854.1| metallo-beta-lactamase hydrolase subunit [Citromicrobium bathyomarinum JL354] Length = 549 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 207/559 (37%), Positives = 317/559 (56%), Gaps = 20/559 (3%) Query: 1 MKNE-----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 MK EL+FL LGG GEIGMN+ LYG KW+M+D G++F ++ PG++LVF Sbjct: 1 MKKNFKPENELLFLALGGSGEIGMNVNLYG----CDGKWLMVDLGMTFGANEYPGIELVF 56 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 D+ FI + K+L+ I +THAHEDH GA+ + L VP+YA+PF L+ K + Sbjct: 57 ADLEFIEERTKDLLGIVLTHAHEDHIGAVPYFAADLGVPLYATPFTAELVRRKLKEADLV 116 Query: 116 KKIP-CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 ++P I + + +G F I + + HSI E AL+I +P G + HTGDWKLD+D I+ Sbjct: 117 DEVPLHIVREGDQDMQIGPFGIRYLPLAHSIAEGNALLIDTPYGKVFHTGDWKLDEDPII 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTF 233 G+ T ++ L AIG +G+LAL+CDSTN SE + K + + ++N V+VTTF Sbjct: 177 GEPTTEEELRAIGEDGVLALVCDSTNVFNPNESGSEGAVFKGLLEEVQNWPDRRVVVTTF 236 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +S+V+R+ ++ +IA++ GR++V+ G SL+R++ V+ G + + ++ PR + Sbjct: 237 ASNVARLHTLGEIAKETGRELVIAGRSLERILEVSQGCGYLTDFPQPIDWDTAMNLPRGK 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ATG QGEPR+AL +++ ++LA D V+FSSR IPGNE+AIG I N+L E+G Sbjct: 297 VLIVATGGQGEPRAALGRMADKNHP-LELARGDVVLFSSRQIPGNEIAIGKIMNQLAERG 355 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + ++ + + +HVSGHP +L+ +Y+W++P+VLV +HGE H+ L L EGI Sbjct: 356 IEMVTDR-QSMIHVSGHPGRPELQALYEWLQPEVLVPVHGEIRHMQEQARLGLAEGIPHA 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +NG ++ L P I V G + DG LI + +RR+LS G L V V Sbjct: 415 VFQKNGDIVSLAPGEPGKIGRVPTGRLVLDGDLIVPADGSAVTERRRLSRDGVLVVVVT- 473 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 I +G+P D D + V + L KD +E+ A Sbjct: 474 ---GR--DDVTIRALGLPL-DEDFPDFVAEATRDVKEALRRLRGRDAKDAGARQEAARLA 527 Query: 534 LRSLLKKVWGKKPLVTVFI 552 R + GK+P V V I Sbjct: 528 ARRAANRWSGKRPQVQVVI 546 >gi|58698638|ref|ZP_00373532.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534839|gb|EAL58944.1| metallo-beta-lactamase family protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 524 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 191/538 (35%), Positives = 304/538 (56%), Gaps = 15/538 (2%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 MN++LY Y KWIMID GV F + +PGV+L+ DI FI + +K+L+ I ITHAHE Sbjct: 1 MNVSLYHY----QGKWIMIDLGVGFADETMPGVELLIADIDFIAQRKKDLLGIIITHAHE 56 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH GA+ LW L +Y + F + L+ K R+ +P +++G F++E Sbjct: 57 DHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKEVDINGSINLGPFTVEF 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG-ILALMCD 197 + V HSIPE +++I + +G+ +HTGDWK D ++G ++ + L IG++G +LA +CD Sbjct: 117 INVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNMERLKEIGDKGDLLAAICD 176 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STN + + SE I NIY+I+K +K V V+ F+S+V+RI +I A+ + RK+VLL Sbjct: 177 STNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIETISQAAKALNRKVVLL 236 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 G SL R+V VA D G + FL + +PRE+L+++ TG QGEP +A A+L+ Sbjct: 237 GRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGCQGEPLAATARLAAKSH 296 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + K+ + DT+IFSS+ IPGNE ++ N +E GV VI E E VH SGHP +LK Sbjct: 297 QAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKTEH-VHASGHPTREELK 355 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 MY I+P++ + +HGE +H AH + A + G+A + G ++ L E +D + Sbjct: 356 EMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPGDIVNLENG--EKVDSIDV 413 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 F DG L+ I R+++ G + V +++ + P++ G+ D Sbjct: 414 DYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPKVFVPGVFEVLEDA 473 Query: 498 GKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 I K++ K V + P + ++ I S++ S+LK+ K+P++ V I ++ Sbjct: 474 ATIQKIVKK-VESLFSLQPTKK------IKNKIESSILSILKEYLLKRPIIEVQIEQV 524 >gi|118586723|ref|ZP_01544160.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] gi|118432811|gb|EAV39540.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] Length = 636 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 141/556 (25%), Positives = 244/556 (43%), Gaps = 17/556 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L +P GGV E G NM + + ++D G+ +P+ DL GVD+V PD + Sbjct: 4 MVKTALSIIPFGGVRENGKNMYAV----TVNDEIYILDAGLKYPETDLLGVDVVVPDFNY 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER-VSKKIP 119 ++ ++ +F+TH H D GAL L L VPV+ + F + L + + +S Sbjct: 60 LVDHADQVVGVFLTHGHADAIGALPYLLEALRVPVFGTEFTLALAKQQVSRRPSLSDFDD 119 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 V+ G + HSIPE++ +V+ + G IV+TGD+K D+ A TD Sbjct: 120 YNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFKFDNTAKGPYKTD 179 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSSVS 238 L IG G+LAL+ D G +SE I + ++ +NA ++V T +S+V Sbjct: 180 YSRLTRIGQRGVLALLADVNGVETPGESVSESAIDEFVFQTFRENADRRIIVATVASNVQ 239 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSDESFGLYPREQL 294 RI+ +I+ A Q GRKI + G+ L++VV A+D + +LF + ++ +L Sbjct: 240 RIQEVINSAYQTGRKIAISGNDLEQVVKTALDSKRLNLPTSYNKLFTNIKNLKSVEPNKL 299 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +++ TG GEP L ++++G+ R V E D + ++ +E + ++ + +G Sbjct: 300 VILETGKMGEPIRDLQRMAKGDDRYVSFNENDLIFVATTPSISSESIMAKTRDLIFRRGA 359 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--AC 412 V++ + SGH NDL+ M +I+P + GE LA + GI Sbjct: 360 NVVSIKDN--LRSSGHASQNDLQFMLNFIKPDYFFPVSGEYRVFSVADFLAQEVGIKKNH 417 Query: 413 VPPVRNGKMLRLFPDPIEII--DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVN 470 + G + P+ + D + DG ++ + R+ LS G + Sbjct: 418 IFLSMKGDQYKFDPENKKFTLEDSFEVDDTMIDGSGNTDVGNIVLRDRKMLSEDGVVIAA 477 Query: 471 VLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 +D + P I G + IH+ V + L D L+ Sbjct: 478 ATIDRKKKKVVAAPRITTRGFIFVKTNRELIHESAKVMVDQIELYLDNTDDFDWNDLKSG 537 Query: 530 ISSALRSLLKKVWGKK 545 + A+ + ++ Sbjct: 538 VKDAMSKFFYEQTKRR 553 >gi|330685692|gb|EGG97333.1| ribonuclease J 2 [Staphylococcus epidermidis VCU121] Length = 523 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 149/495 (30%), Positives = 250/495 (50%), Gaps = 10/495 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNKDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ ++ L IF+TH HE GA+ + + PVY S I L++ ++KK+ Sbjct: 63 IENKEKLKGIFLTHGHEHAMGAVSYILEQVDAPVYGSKLTIALVKENMKSRNINKKVRYY 122 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 S + +I HSIP+++ + I + G+IV+TG++K D D Sbjct: 123 SVNHESVMRFKNVNISFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLRGQYSPDFK 182 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + IG EG+ AL+ DST A + G E I+ ++YD KG ++V+ ++S+ RI+ Sbjct: 183 RMAEIGEEGVFALISDSTEAEKPGYNTPENVIEHHMYDAFAKVKGRLIVSCYASNFIRIQ 242 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 +++IA Q+ RK+ LG SL+ ++A +G L + YP+ ++I+IATG Sbjct: 243 QVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPISEVENYPKNEVIIIATG 302 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 QGEP AL+Q+++ + + + + + D+V + A EV I N LV G +I Sbjct: 303 MQGEPVEALSQMAQQKHKIMNIEKGDSVFLAITASANMEVIIADTLNELVRAGAHII--P 360 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 +H S H +LK M ++P+ V + GE +AH +LA + G+ + V Sbjct: 361 NNKKIHASSHGCMEELKMMINIMKPEYFVPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK 420 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 G ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 421 GDVINYDGKNMVLNEKVHSGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR 480 Query: 478 NIFGVPEIVDIGIPA 492 I PEI G Sbjct: 481 RIAAGPEIQSRGFVY 495 >gi|207108187|ref|ZP_03242349.1| conserved hypothetical ATP-binding protein [Helicobacter pylori HPKX_438_CA4C1] Length = 630 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 149/495 (30%), Positives = 267/495 (53%), Gaps = 10/495 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K + Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + VG F IE + + HSI ++ AL I++ G I+HTGD+K+D + TD Sbjct: 256 KIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDL 315 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G +G++ L+ DSTN+ + GT SE I + K A+G V+++TFSS++ R+ Sbjct: 316 YRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRV 375 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 I + RKI ++G S+++ + +A ++G I Q F+ YP +++++ T Sbjct: 376 YQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTT 435 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E R++ + D VI S++AIPGNE ++ + N L+++ +V + Sbjct: 436 GSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQ 495 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + + +HVSGH + K M + I+P+ + +HGE H+ HK+ A+ G+ + + Sbjct: 496 EFD-NIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLME 554 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 +G + + P I+ + + G D + +R +++ G + + ++ + Sbjct: 555 DGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNK 614 Query: 478 N-IFGVPEIVDIGIP 491 + + +G+ Sbjct: 615 QALLESSQFSSLGLV 629 >gi|47459453|ref|YP_016315.1| hydrolase [Mycoplasma mobile 163K] gi|47458783|gb|AAT28104.1| predicted hydrolase [Mycoplasma mobile 163K] Length = 604 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 146/565 (25%), Positives = 270/565 (47%), Gaps = 17/565 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+ +L LGGV EIG + + + ++K +ID G+ F G+ + PD ++ Sbjct: 1 MQPTKL--FGLGGVQEIGKSTFVLEH----NKKIFIIDAGIKFADSFTTGIKGIIPDYSY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIP 119 + + N+ A+FITH HEDH G + L + + + ++A AI L+ K + +KI Sbjct: 55 LKANQDNIQALFITHGHEDHIGGIPYLVATVKISKIFAPKIAIQFLKLKFQEHNILQKIE 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + G ++ HSIP+ + ++ G ++ TGD++ D I TD Sbjct: 115 FIEIEKDSIHKFGDVVVDFWTAQHSIPDAFGIRFKTSNGTVLFTGDFRFDYRPIGNF-TD 173 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +G EG+ L+ DSTNAMR SE I +I + AKG ++T F+S+++R Sbjct: 174 FSKIEQMGKEGVTVLLSDSTNAMRPMHSPSETDILNDIKKYILEAKGKTIITAFASNLTR 233 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIA 298 I +II + +IG+K+V G S+ + + + I +D +F+ + Y +++++ Sbjct: 234 ITAIIKLVAEIGKKVVAFGRSMVNGIEIGRKLDYIDVEDSVFIDKKHLKNYEDNEIVILT 293 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL++++ + + + D +IFSS IPGN + I + N+L + G + Sbjct: 294 TGSQGEQMAALSRMANKKHPQIDIKSGDMIIFSSSPIPGNRIQIELLINKLYKFGAEIKE 353 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPV 416 + +H SGH Y + +++ +P+ + HGE +AH ++ GI V Sbjct: 354 NKIDGYLHTSGHAYKEEHIKIFNLTKPKYFLPYHGEYRMAIAHGNTGIETGIKEENVMIP 413 Query: 417 RNGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 G + + + + + D ++ DG I R QL G + V + +D Sbjct: 414 GIGDVYYMKNNEVWLSDEKLDLNSTFIDGQNILTINKEVFNDRSQLGESGFVDVVIAIDK 473 Query: 476 HYNIFG-VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK--LLRESISS 532 N P+I+ G Y + ++ + + V ++VV L + + KD +++ + Sbjct: 474 SKNNVTFKPKIISRG-CFYARNSVELLEDVRNLVRSSVVYLIKNK-KDWTVPDIKQIVED 531 Query: 533 ALRSLLKKVWGKKPLVTVFINKISR 557 L+ K +KP++ + + Sbjct: 532 RLKPYFYKAKRRKPIIITSVLFVDE 556 >gi|325125522|gb|ADY84852.1| Metallo beta subunit lactamase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 570 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 137/534 (25%), Positives = 246/534 (46%), Gaps = 14/534 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L + LGGV E G NM + + ++D G+ +P L G+D+V PD+ F Sbjct: 2 SDKLKIMVLGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFK 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + ++ IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 QYGDQVVGIFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFN 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A ++D S+ HS+P+++ +VI +P G IV+TGD+K D A TD Sbjct: 118 VIDADTEIDFKNASVSFFHTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ Sbjct: 178 RLAEIAGNGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNLNRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 + + A GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG Sbjct: 238 QVFNAAAATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R + + E D V ++ E + + + G VI Sbjct: 298 RMGEPLQSLQKMANNSHRMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRN 418 +H SGH DL+ + ++P++LV + G+ L A K+LA++ G+ V +N Sbjct: 358 RN--MHTSGHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPDDVYITQN 415 Query: 419 GKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 G L D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLEYDTKRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRK 475 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 I P++ G Y K+ ++ + + + ++ D L++ Sbjct: 476 KKKIVSEPQVTSRGF-VYINANHKLMNDSIQVIKDAIQANFEHKKFDWTELKQD 528 >gi|162448647|ref|YP_001611014.1| metallo-beta-lactamase family protein [Sorangium cellulosum 'So ce 56'] gi|161159229|emb|CAN90534.1| hypothetical metallo-beta-lactamase family protein [Sorangium cellulosum 'So ce 56'] Length = 613 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 170/552 (30%), Positives = 273/552 (49%), Gaps = 9/552 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGG+GE+GMN + ++IDCGV+FP D GVD+ P ++ Sbjct: 70 TLRLVPLGGLGEVGMNCLAL----QQADGLLLIDCGVTFPSTD-LGVDVYHPRFDHVLAL 124 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R + I +TH HEDH G L L L VPV+ P A+ L+ + + K+ + Q Sbjct: 125 RDQVRGIVLTHGHEDHIGGLPFLLRHLDVPVWGPPHALELVRYRLAEHALEDKVRLLPTQ 184 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +V +G F +E +RV HSI + AL I + G +VHTGD+KLD + G+ TD+ Sbjct: 185 VGREVAIGGFVVEPLRVTHSIVDATALAIHTAAGLVVHTGDFKLDPTPLDGEPTDEARFR 244 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 A+G+ G+ L+ DSTN G SE+ + + ++++ A V+V F+S+V R+ ++ Sbjct: 245 ALGDAGVRLLLSDSTNVDSPGEAGSERAVAHALAELVETAPARVVVGVFASNVQRLLALG 304 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQG 303 A + RKI LLG S++ V A VG + L + E PRE+L+VIA+G+Q Sbjct: 305 QAAIRARRKICLLGRSVQTHVRAAQTVGRLPWPSDLLVPPEVASSMPRERLLVIASGTQA 364 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E S L + + G ++L E D V+ SSR IPGN+ + + L+ GV ++ + Sbjct: 365 ERASTLTRFASGTHPLLRLEEGDRVVLSSRVIPGNDRPVVDMMAGLLRLGVELVTWSTDR 424 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 VH SGH + + RM +P+ + +HG HL H ELA + G+A V NG ++ Sbjct: 425 RVHASGHAHRTEQARMIDLTQPRGFLPVHGALHHLTRHAELARERGVAEVLVAENGHVVE 484 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 + + + + + +R L G V++++D H + P Sbjct: 485 IGKTQPLGRSGRAVTGRVATAGG-EELGEEVLRERANLGRSGVAFVSLVVDVHGALAAPP 543 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 +++ G+ G + + V V D R+ + E A R L+ G Sbjct: 544 QVLARGVTGELE--GGALRAAARAVAQAVNDCEPRARRRDNDIIEIARLAARRTLEAKLG 601 Query: 544 KKPLVTVFINKI 555 ++PLVTV + ++ Sbjct: 602 RRPLVTVALTRL 613 >gi|255540285|ref|XP_002511207.1| conserved hypothetical protein [Ricinus communis] gi|223550322|gb|EEF51809.1| conserved hypothetical protein [Ricinus communis] Length = 880 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 174/569 (30%), Positives = 279/569 (49%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +P+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI + Sbjct: 79 LRIVPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKRWS 134 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YAS F + L++ + + F Sbjct: 135 HKIEAVIITHGHEDHIGALPWVIPALDSRTPIYASSFTMELIKKRLKEHGIFLPSRLKVF 194 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + K G F +E +RV HSIP+ LV+R G I+HTGDWK+D+ + G V D+++L Sbjct: 195 RTRKKFIAGPFEVEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREAL 254 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + ++ + AKG ++ T F+S++ R+ S+ Sbjct: 255 EELSKEGVTLMMSDSTNVLSPGRTISESVVADSLLRHISAAKGRIITTQFASNIHRLGSV 314 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 315 KAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQ 374 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G + KL + D +++S++ IPGNE + + NR+ E G ++ E Sbjct: 375 AEPRAALNLASYGSSHSFKLNKDDIILYSAKVIPGNESRVMKMMNRISEIGSTLVMGKNE 434 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN---- 418 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L G+ ++N Sbjct: 435 -LLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGVRHTTVIKNGEML 493 Query: 419 -----GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 L I + E + ++ G +L I +R +++ G + +++ + Sbjct: 494 GVSHLRNRKVLSNGFISLGKENLQLMYNDGDKAFGTSTELCIDERLRIATDGIIVISMEI 553 Query: 474 DN--------HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 I G I D GK+ L K + P L Sbjct: 554 LRPQNAESLTANTIKGKIRITTR---CLWLDKGKLLDALHKAAQAALSSCPVNCP--LSH 608 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + +++S LR +++K GK+P V + Sbjct: 609 MEKTVSEILRKMVRKYSGKRPEVIAIAVE 637 >gi|240047773|ref|YP_002961161.1| putative serine protease, subtilase family act [Mycoplasma conjunctivae HRC/581] gi|239985345|emb|CAT05358.1| Putative serine protease, subtilase family act [Mycoplasma conjunctivae] Length = 717 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 145/563 (25%), Positives = 277/563 (49%), Gaps = 12/563 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + F LGG+ EIG + + ++ID G+ F G+ + PD ++ Sbjct: 5 DNPTRFFGLGGMQEIGKSTLVIE----DDNDIVIIDAGIKFANIFATGIKGMVPDYQYLK 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCI 121 + + +FITH HEDH G + L + + +Y + AI L+AK ++ + + I Sbjct: 61 QNESKIRGVFITHGHEDHIGGIAYLVRQVQIKAIYGAKIAIEFLKAKFADLKIHENVKFI 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 D S++ HSIP+ + I SP G+I+ TGD++ D I TD D Sbjct: 121 EINKDDVYKFNTLSVDFWTAQHSIPDAFGIRITSPHGSIMCTGDFRFDYTPIGNY-TDFD 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++ + L DSTNAMR SEK I +I M++A +++T F+S+++RI+ Sbjct: 180 RLKTIGDQNLTVLFSDSTNAMRPNHSPSEKDILSDIEMHMRSATKKIIITAFASNLTRIK 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I+++ ++ +KI+ G S+ +++ +G I+ + ++ Y +L+++ TGS Sbjct: 240 AIMELGIKLNKKIITFGRSMVNGINIGRKIGYIEIPNESFAGKNLNQYEPNELLILTTGS 299 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE +AL ++S + V + D VIFSS IPGN + I H+ NRL + + Sbjct: 300 QGEQLAALDRMSNRKHPKVAIESGDLVIFSSSPIPGNRIKIEHLINRLYKLNAIIKENGP 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 + +H SGH Y + ++++Q+ +P+ HGE +AHK+ A++ G+ V NG Sbjct: 360 DGYLHTSGHAYKEEHEKIFQYTKPKYFFPYHGEYRMCLAHKQTAIECGVKKENVLIPANG 419 Query: 420 KMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 ++ + + + + V DG +I I +R + G + V V ++ Sbjct: 420 QVYEMVNQEVRLTKKTVACDPVYIDGEIISLDNTRIIDERELMRENGFVYVLVPINRVDN 479 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRS 536 +IFG +I+ G ++ + + + V ++++ L + + + +++++ + L + Sbjct: 480 SIFGRVKIISRG-AFIVKKSQEMVQEIRRLVHSSILFLLKNKTDVSIPQIKQTVKNRLNT 538 Query: 537 LLKKVWGKKPLVTVFINKISRQR 559 K +KP++ + + ++ Sbjct: 539 FFYKQRRRKPVILSSVIYVDERQ 561 >gi|241889914|ref|ZP_04777212.1| ribonuclease J 2 [Gemella haemolysans ATCC 10379] gi|241863536|gb|EER67920.1| ribonuclease J 2 [Gemella haemolysans ATCC 10379] Length = 622 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 143/556 (25%), Positives = 271/556 (48%), Gaps = 12/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLGGV E+ NM + G + ++D G+ FP+ ++ G+D V PDI+++++ Sbjct: 74 KIRITPLGGVEEVAKNMYMVEIG----DEIFVLDAGLMFPETEMIGIDAVIPDISYLVRN 129 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ + IF+++ H GA+ + L PVY S I LL+ + ++I + Sbjct: 130 KQKIKGIFLSNGHVSSMGAVPYIIDKLKCPVYGSKLTIDLLKNHLKQLGIKRRIKFYYVK 189 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +K D S+ + +S+P+++ + I + GNIV+TG++K D +D + Sbjct: 190 DNNKYDFNNASVTFFKTTYSMPDSLGICIETSQGNIVYTGEFKFDQSVSKEYKSDIVKIS 249 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+LAL+ DS+NA +G + E + I + A ++VT ++S+ I I+ Sbjct: 250 TLGQKGVLALLSDSSNANVKGYNVPENEAAEQIDNAFYQANKRIIVTCYASNFLTISHIV 309 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 A RKI+LLG ++K ++ A ++ ++ +D +S E YP+ ++ ++++G QG Sbjct: 310 RAALAQNRKILLLGQAIKASINTARNMNYLQIEDSNLISVEELKDYPQNEVCILSSGDQG 369 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP A+ ++ ++ +++ DT++ ++ P EV + N LV+ G V+ A Sbjct: 370 EPIEAMKNIAEKKIDGIQIESGDTIMIAATPSPNMEVMLFQTLNLLVKLGANVVT--ASK 427 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 +H + H +LK M + P+ + + GE +L H E+A + G+ + + G Sbjct: 428 RLHAASHATKEELKMMLNMLMPKHFIPVQGEFRNLRKHAEIAGETGVAAENIHILSKGTT 487 Query: 422 LRLFPDPIEI-IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L L + + + V G L DG IG D + R+ LS G + + + Sbjct: 488 LELSGNKSKTLQNNVPVGNMLVDGRGIGDVEDSVLKDRKLLSNDGIFVASYAISRKEKTL 547 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P I G Y ++ K + VI + + P ++ ++ I S L SLL Sbjct: 548 VGRPVIQTKGF-VYVKKSMELIKEAEERVIEYLENNPIKSIRECAAVKAEIRSMLSSLLY 606 Query: 540 KVWGKKPLVTVFINKI 555 +KP++ + + I Sbjct: 607 DNTKRKPIIIINFSLI 622 >gi|297734394|emb|CBI15641.3| unnamed protein product [Vitis vinifera] Length = 1659 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 182/569 (31%), Positives = 287/569 (50%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 851 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWS 906 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 907 HKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEFGIFVPSRLKVF 966 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + K G F IE +RV HSIP+ LVIR G I+HTGDWK+D+ + G V D+++L Sbjct: 967 RTRKKFIAGPFEIEPIRVTHSIPDCCGLVIRCADGTILHTGDWKIDESPLDGKVFDREAL 1026 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + + + +AKG V+ T F+S++ R+ S+ Sbjct: 1027 EELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISSAKGRVITTQFASNIHRLGSV 1086 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 1087 KAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQ 1146 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G ++KL+++D +++S++ IPGNE + + NR+ E G +I E Sbjct: 1147 AEPRAALNLASYGSSHSLKLSKEDIILYSAKVIPGNETRVMKMLNRVSEIGSTIIMGKNE 1206 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 1207 G-LHTSGHGYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEML 1265 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV-- 471 L I + E + ++ G +L I +R +++ G + +++ Sbjct: 1266 GVSHLRNRRVLSNGFISLGKENLQLMYNDGDKAFGTSTELCIDERLRIASDGIIVISMEI 1325 Query: 472 ----LLD--NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 ++D ++ G I D GK+ L K + P L Sbjct: 1326 LRPQVVDGVTEKSLKGKIRITTR---CLWLDKGKLLDALHKAAHAALSSCPVNCP--LAH 1380 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + ++S LR +++K K+P V + Sbjct: 1381 MERTVSEVLRKMVRKYSSKRPEVIAIAIE 1409 >gi|304373230|ref|YP_003856439.1| hypothetical protein MHR_0444 [Mycoplasma hyorhinis HUB-1] gi|304309421|gb|ADM21901.1| hypothetical protein MHR_0444 [Mycoplasma hyorhinis HUB-1] Length = 591 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 159/566 (28%), Positives = 278/566 (49%), Gaps = 16/566 (2%) Query: 2 KNEEL---VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 KN ++ F LGG+ EIG + + + S ++ID GV F GV + PD Sbjct: 12 KNSKIIPTKFFGLGGMQEIGKSTLVIEHAS----DIVIIDSGVKFADIFTTGVKGMIPDY 67 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKK 117 +++ K + + +FITH HEDH G + L +H+ ++A AI L A+ + K Sbjct: 68 SYLQKNQNKIKGLFITHGHEDHIGGIVYLIQQVHIKTIFAPRIAIQYLRARMDEFGLKIK 127 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 I I + S++ HSIP+ + + S G+++ TGD++ D I Sbjct: 128 IKFIEIEKDAVHTFDHLSVDFWTAQHSIPDAFGIRVSSKNGSLMLTGDFRFDYTPIGNY- 186 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 TD L IGNE + AL DSTNAMR SEK I K+I +KNA V++T F+S++ Sbjct: 187 TDFSKLKQIGNENLTALFSDSTNAMRPSHSPSEKDILKDIEYHIKNATKKVIITAFASNL 246 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 +RI++IID+ ++ +KIV G S+ V + +G I D +F+ ++ Y ++++ Sbjct: 247 TRIKAIIDLGIKLDKKIVTFGRSMINGVKIGRKIGYINSPDNIFIDKKNISKYDPNEILI 306 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGE +AL ++S + +VK+ KD +IFSS IPGN + I + NRL + + Sbjct: 307 LTTGSQGEQLAALDKMSYNKHPHVKIGNKDVIIFSSSPIPGNRIKIELLINRLYKLNAII 366 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 ++ +H SGH Y + +++++ +P+ HGE +AHK+ A++ GI V Sbjct: 367 KENGSDGYLHTSGHAYKEEHEKIFELTKPKYFFPYHGEYRMCLAHKQTAIESGIKATNVI 426 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHG-LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 G++ + I EV+ DG+++ + +R +L G + + + Sbjct: 427 IPDLGEVYEMVNQKITKSKEVIPTGPVYIDGYVVSTANSQILKEREELRENGFVFILTAI 486 Query: 474 DNHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESIS 531 D N I G +++ G + + + + V ++ + + D+ L++ I Sbjct: 487 DKKTNSIIGRSKVISRG-AFFAKSSKNLLNEIRRLVHGAILFTIKNESKWDIPQLKQLIK 545 Query: 532 SALRSLLKKVWGKKPLVTVFINKISR 557 + L + K +KP++ + Sbjct: 546 NRLTTFFYKEKRRKPVILSSFLFVDE 571 >gi|242060800|ref|XP_002451689.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor] gi|241931520|gb|EES04665.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor] Length = 875 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 177/569 (31%), Positives = 282/569 (49%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 86 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDEFGVQKIIPDTTFIKKWS 141 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + Sbjct: 142 HKIEAVIITHGHEDHIGALPWVIPALDSTTPIFASSFTMELIKKRLKEFGIFLSSRLKVL 201 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + G F +E +RV HSIP+ LV+R G I HTGDWK+D+ + G + D+ +L Sbjct: 202 RIKKRFQAGPFEVEPIRVTHSIPDCCGLVLRCGDGIIFHTGDWKIDESPVDGKIFDRQAL 261 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + ++ + AKG V+ T F+S++ RI SI Sbjct: 262 EELSKEGVTLMMSDSTNVLSPGRSISESVVAGSLLRHISEAKGRVITTQFASNIHRIGSI 321 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G + E Y + L+V+ TGSQ Sbjct: 322 KAAADLTGRKMVFVGMSLRTYLEAAFKDGKAPMDPSTLVKAEDMDAYAPKDLLVVTTGSQ 381 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEPR+AL S G +KL+++D +++S++ IPGNE + + NRL + G ++I + Sbjct: 382 GEPRAALNLASYGGSHALKLSKEDVLLYSAKVIPGNETRVMKMMNRLTDLGPKIIMGK-D 440 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + +HGE L L H+ L GI ++NG+ML Sbjct: 441 SGLHTSGHAYREELEEVLRIVKPQHFLPVHGELLFLKEHELLGRSTGIRHTTVIKNGEML 500 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 L + + E + ++ G DL I +R +++ G + V++ + Sbjct: 501 GVSHLRSRRVLSNGFVSLGKEDLQLMYSDGDKAFGTSTDLCIDERLRIASDGIIFVSMEI 560 Query: 474 DN--------HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 + G +I D G++ L K + P L Sbjct: 561 FRPQKEHGLAQSGLKGKFKITTR---CLWLDNGRLLDALYKAAHAALSSCPVNCP--LSH 615 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + ++ LR +++K GK+P V + Sbjct: 616 MERMVAEILRKMVRKYSGKRPDVIAVATE 644 >gi|148377974|ref|YP_001256850.1| hypothetical protein MAG_7120 [Mycoplasma agalactiae PG2] gi|148292020|emb|CAL59412.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 614 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 156/554 (28%), Positives = 282/554 (50%), Gaps = 14/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +PLGGV EIG + + +G + ++ID G+ F G+ + PD ++ + + Sbjct: 5 RIIPLGGVQEIGKSTLIIEHG----KHIVIIDAGIKFADTATTGIKGIVPDYKYLKERKD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L +H+ +YA AI L+ K +++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPRIAIQYLKLKFEEHKITHKVEFIEIEK 120 Query: 126 GDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G ++ HSIP+ + + +P G+++ TGD++ D + I TD L Sbjct: 121 SAVHEFGNGQVKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG EG+ L+ DSTNAMR SE I +I M++A ++VT F+S+++R+++I Sbjct: 181 DAIGKEGLTVLLSDSTNAMRPFHSPSENDILIDIERHMRSATRKIIVTAFASNLTRVKAI 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID+A ++ +K+ G S+ + + + +G IK +F+ P QL+V+ TGSQ Sbjct: 241 IDLAVKLKKKVACFGRSMVQGIKIGRKLGNIKAPASIFIEKREISKVPENQLVVLTTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++S G+ N+K+ + D VIFSS IPGN + + + NRL + G + + Sbjct: 301 GEQLAALSRMSYGKHANIKIEKGDMVIFSSNPIPGNRMVVELLINRLAKLGAIIKENGPD 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +H SGH Y ++ +++Q RP+ + HGE VAH E A++ G+ + G+ Sbjct: 361 GYLHTSGHAYKHEHDKIFQLTRPKFFIPYHGEYRMCVAHGESAVRNGVNKNNIFIPEIGQ 420 Query: 421 MLRLFPDPIEI-IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + + + I +++ +G DG + +R +L+ G +++ + +D N Sbjct: 421 VFNMVDNQIIPTTEKIEYGPIYIDGTTTLSVTGSTLKERNELANSGFVNIIMTIDKDKNE 480 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSL 537 I G P ++ G Y + + + V+ + + ++ L++ I L SL Sbjct: 481 IVGRPHLISRG-SFYVKTSLALVEEAKRIAHGAVLYHIKNSQTWNIVELKQLIIDRLESL 539 Query: 538 LKKVWGKKPLVTVF 551 K ++P++ Sbjct: 540 FYKEKRRRPIIIPT 553 >gi|302791347|ref|XP_002977440.1| hypothetical protein SELMODRAFT_107166 [Selaginella moellendorffii] gi|300154810|gb|EFJ21444.1| hypothetical protein SELMODRAFT_107166 [Selaginella moellendorffii] Length = 835 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 177/571 (30%), Positives = 295/571 (51%), Gaps = 32/571 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G+ ++IMID G+ FP + GV V PD TFI + + Sbjct: 34 LRILPIGGLGEIGMNCMLVGHY----DRYIMIDAGLMFPDYEDFGVVKVLPDTTFISRWK 89 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L +Y++ F + L++ + + C +F Sbjct: 90 HKIEAVIITHGHEDHIGALPWVIPALDPQTRIYSTSFTLELIKRRLKDYNFPFEHRCHTF 149 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F +E++RV HSIP+ L++R G I H+GDWK+D++ + G + D+++L Sbjct: 150 TMRNPFQAGPFKVEAIRVTHSIPDCCGLILRCQDGTIFHSGDWKIDENPLDGKIFDRNTL 209 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+ +M DSTN + G ISE ++K++ + AK V+ T F+S++ R+ S+ Sbjct: 210 EELGKEGVTLMMSDSTNVLSPGRTISETDVRKSLMQYVTEAKSRVISTQFASNIHRLGSM 269 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G++LK + A G + + E G Y + L+++ TGSQ Sbjct: 270 KAAADASGRKLVFIGTALKTYIDAAWKDGQAPFDPSILVKAEDMGAYSPKDLLIVTTGSQ 329 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE RSAL S G R++KL++ D +++S++ IPGNE + + NR+ E G +I + Sbjct: 330 GETRSALNLASFGSSRSLKLSKDDVILYSAKMIPGNETRVMKMLNRISEAGPHIITGK-D 388 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y ++L+ + + IRPQ + +HGE L H++L GI +RNG+ML Sbjct: 389 KLLHTSGHAYRDELQELLRLIRPQHFLPVHGEYTFLKEHEQLGRASGIQHTKVIRNGEML 448 Query: 423 RLFP---------DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + P + E + ++ G +DL + +R+ ++F G + V + Sbjct: 449 GVSPLRNRRVLSSGFAALGKEDLQLMYNDGEKAFGTASDLRVDERKHIAFDGIIIVRYEV 508 Query: 474 ----------DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 + Y + I D GK+ + L + V Q DL Sbjct: 509 YDDNYASRLDGSEYGLRARIRITTR---CLWLDQGKLTEALHRAANAAVGSCKQD--ADL 563 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + + ++++ LR + +K K+P V + Sbjct: 564 QTVERTVATVLRKVAQKYNNKRPEVVAIATE 594 >gi|269115113|ref|YP_003302876.1| hypothetical protein MHO_3380 [Mycoplasma hominis] gi|268322738|emb|CAX37473.1| Conserved hypothetical protein, putativemetallo-beta-lactamase [Mycoplasma hominis ATCC 23114] Length = 580 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 155/554 (27%), Positives = 269/554 (48%), Gaps = 13/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG+ EIG + + Y +ID G+ F + GV+ PD TF+ + + Sbjct: 5 KIFGLGGMQEIGKSTLVIQY----ENHIFIIDTGIKFCDSYVTGVNGSIPDFTFLAENQD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +FI H HEDH G + L + V ++A AI L+ K ++ + I I + Sbjct: 61 KIEGLFINHGHEDHIGGVPYLVQQVDVKKIFAPRIAIQYLKLKFEDMKIKRNIEFIETEK 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G ++ HSIP+ + I++P G+++ TGD++ D I TD + L Sbjct: 121 DAVWTFGPCQVDFWTAQHSIPDAFGIRIKTPNGSLMMTGDFRFDYTPIGNF-TDFNKLKQ 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG+EG+ L DSTNAMR SE I K+I M A+ ++VT F+S+++RI++II+ Sbjct: 180 IGDEGLDVLFSDSTNAMRPNHSPSESDILKDIKKYMLEAEKKIIVTAFASNLTRIKAIIE 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 + + +K+V G S+ + + +G I D++F+ +S + +L+++ TGSQGE Sbjct: 240 LGASLNKKVVAFGRSMVDGIDIGRRLGYINVPDEVFIDKKSLSKFGDNELLILTTGSQGE 299 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + LA++S G+ N+ + KDT+IFSS IPGN I + NRL + G + + Sbjct: 300 ELAGLAKMSWGKHPNITIKPKDTIIFSSSPIPGNRSKIELLVNRLYKLGAIIRENGVDGY 359 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH Y ++ +++++ RP+ + HGE V H A++ G+ + R G + Sbjct: 360 LHTSGHAYKDEHRKIFELTRPKYFMPYHGEYRMSVVHGYTAIESGVDAKNILIARLGDVY 419 Query: 423 RLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 L + + + +V G DG ++ K I +R +L G + V + ++ N I Sbjct: 420 YLENHQVRLSNEKVYFGPVFIDGNILSKTNSQIIKERSELGQNGFMHVVLAINKEKNLII 479 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSLLK 539 G P IV G Y + + + + V ++ + + L++ I L Sbjct: 480 GKPRIVSRG-AFYVKNSLHLIEEAKRLVHGAILYTIKNSNDWTVPQLKQLIIDRLAPFFY 538 Query: 540 KVWGKKPLVTVFIN 553 K + ++ I Sbjct: 539 KNKRRDVVIIPTIL 552 >gi|149184619|ref|ZP_01862937.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. SD-21] gi|148831939|gb|EDL50372.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. SD-21] Length = 552 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 208/559 (37%), Positives = 313/559 (55%), Gaps = 20/559 (3%) Query: 1 MKN-----EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 MK +EL+FL LGG GEIGMN+ LYG +W+M+D G+SF PGVDLVF Sbjct: 1 MKKNFKPEDELLFLALGGSGEIGMNVNLYG----CQGRWLMVDLGMSFSGGQYPGVDLVF 56 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 D+ I + ++L AI +THAHEDH GA+ + L VP+YA+PF L+ K + Sbjct: 57 ADLELIEERTQDLEAIVLTHAHEDHIGAVPYFAADLGVPIYATPFTAELVRRKLEEADLE 116 Query: 116 KKIP-CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + I + VG F + + + HSI E AL+I +P G I HTGDWKLD+D I+ Sbjct: 117 SAVELHIIEEDHGSFRVGPFEVTYIPLAHSIAEGNALLIDTPHGRIFHTGDWKLDEDPII 176 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTF 233 G+ T ++ L IG+EG+LAL+CDSTN SE + K + + + G VLVTTF Sbjct: 177 GEPTTEEELTEIGDEGVLALVCDSTNVFNPAPSGSEGAVFKGLLEEAQRHGGKRVLVTTF 236 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +S+V+R+ ++ ++A + GR++ + G SL R++ VA G + + ++ PR + Sbjct: 237 ASNVARLHTLGEVARETGRQLCVAGRSLDRIIDVAQQNGYLTDFPQPVDFDTAMSLPRGE 296 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 ++++ATG QGEPR+AL+++S ++L D V+FSSR IPGNE+AIG ++NRL +G Sbjct: 297 VLILATGGQGEPRAALSRISEDNHP-IELVSGDVVLFSSRQIPGNELAIGAVQNRLASKG 355 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 V ++ + + +HVSGHP +L+ +Y W+RP+VLV +HGE H+ L L GI Sbjct: 356 VTMVTDR-QSMIHVSGHPGRPELEALYGWLRPEVLVPVHGEMRHMQEQARLGLANGIPDA 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 +NG ++RL P I EV G + DG +I I RR++ G + V L Sbjct: 415 VVQQNGDIVRLAPGAPGKIAEVRAGRLVLDGDIITPADGDSIVMRRRIMHEGVVIV--AL 472 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 D+ N P I +G+P D D ++ + + + L RK + E+ A Sbjct: 473 DDRLN----PIIDSLGLPL-DEDYEDFVAETMQDIRSAIGKLKGSDRKSRGAVHEAARLA 527 Query: 534 LRSLLKKVWGKKPLVTVFI 552 R ++ GK+P V V + Sbjct: 528 ARRAAQRWSGKRPQVRVLL 546 >gi|329767412|ref|ZP_08258937.1| hypothetical protein HMPREF0428_00634 [Gemella haemolysans M341] gi|328836101|gb|EGF85792.1| hypothetical protein HMPREF0428_00634 [Gemella haemolysans M341] Length = 619 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 138/556 (24%), Positives = 269/556 (48%), Gaps = 12/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLGGV E+ NM + G + ++D G+ FP+ ++ G+D V PDI+++++ Sbjct: 71 KIRITPLGGVEEVAKNMYMVEIG----DEIYVLDAGLMFPETEMIGIDAVIPDISYLVRN 126 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ + IF+++ H GA+ + L PVY S I LL+ + ++I + Sbjct: 127 KQKIKGIFLSNGHVSSMGAVPYIIDKLKCPVYGSKLTIDLLKNHLKQLSIKRRIKFYYVK 186 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +K D S+ + +S+P+++ + I + GNIV+TG++K D +D + Sbjct: 187 DNNKYDFNNASVTFFKTTYSMPDSLGICIETSQGNIVYTGEFKFDQSVSKEYKSDIVKIS 246 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+LAL+ DS+NA +G + E + I + A ++VT ++S+ I I+ Sbjct: 247 TLGQKGVLALLSDSSNANVKGYNVPENEAAEQIDNAFYQANKRIIVTCYASNFLTISHIV 306 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 A RKI+LLG +++ ++ A ++ ++ +D +S YP+ ++ ++++G QG Sbjct: 307 RAALAQNRKILLLGQAIEASINTARNMNYLQIEDSNLISIGELKNYPQNEVCILSSGDQG 366 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP A+ ++ ++ +++ DT++ ++ P EV + N LV+ G V+ A Sbjct: 367 EPIEAMKNIAEKKVNGIQIESGDTIMVAATPSPNMEVMLFQTLNLLVKLGANVVT--ASK 424 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 +H + H +LK M + P+ + + GE +L H E+A + G+ + + G Sbjct: 425 RLHAASHATKEELKMMLNMLMPKHFIPVQGEFRNLRKHAEIAAETGVVAENIHILSKGTT 484 Query: 422 LRLFPDPIEI-IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNI 479 L + + + + G L DG IG D + R+ LS G + + + Sbjct: 485 LEISGSKSKTLQNNIPVGNVLVDGRGIGDVEDSVLKDRKLLSNDGIFVASYAISKKEKTL 544 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P I G Y ++ K + VI + + P ++ ++ I S L SLL Sbjct: 545 VGKPVIQTKGF-VYVKKSMELIKEAEEKVIEYLENNPIKSIRECAAVKAEIRSMLSSLLY 603 Query: 540 KVWGKKPLVTVFINKI 555 +KP++ + + + Sbjct: 604 DNTKRKPIIIINFSLV 619 >gi|329576551|gb|EGG58058.1| ribonuclease J 2 [Enterococcus faecalis TX1467] Length = 494 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 136/498 (27%), Positives = 241/498 (48%), Gaps = 13/498 (2%) Query: 1 MKN-EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + +PLGGV E G NM + + ++DCG+ +P+++L G+D+V PD T Sbjct: 1 MKRVSTIKIVPLGGVRENGKNMYVAE----VEDEIFVLDCGLQYPENELLGIDVVIPDFT 56 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + + + +F+TH H D GAL L S + VPV+ + I L + +KK Sbjct: 57 YLEENSERIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFK 116 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++D G ++ + H+IP+++ + I++ GNIV+TGD+K D AI T Sbjct: 117 DFHVIDPHTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQT 176 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D L IG EG+LAL+ DS+NA SE I ++D ++ +G ++V +S++ Sbjct: 177 DYGRLAEIGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQ 236 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD--QLFLSDESFGLYPREQLIV 296 R++ +++ A++ GRK+VL G +R++ A+ + ++ L + + Y EQL++ Sbjct: 237 RVQQVLNAADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLI 296 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG GEP +L +++ V++ E D V ++ E + ++ + G V Sbjct: 297 LETGRMGEPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATV 356 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVP 414 + VSGH PNDL+ M ++P+ + + GE L AH +LA + + Sbjct: 357 KQISDN--LRVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIF 414 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 G +L + + + DG +G ++ + RR LS G V ++ Sbjct: 415 ITGRGDILEYTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTIN 474 Query: 475 -NHYNIFGVPEIVDIGIP 491 I +I G Sbjct: 475 RREKRIVSPAKITSRGFV 492 >gi|308190370|ref|YP_003923301.1| hydrolase [Mycoplasma fermentans JER] gi|319777772|ref|YP_004137423.1| hypothetical protein MfeM64YM_1051 [Mycoplasma fermentans M64] gi|307625112|gb|ADN69417.1| predicted hydrolase [Mycoplasma fermentans JER] gi|318038847|gb|ADV35046.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64] Length = 613 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 152/559 (27%), Positives = 279/559 (49%), Gaps = 12/559 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +P+GGV EIG + Y + +ID G+ F L G+ + PD T++ + K Sbjct: 5 RLIPIGGVQEIGKAALIVEY----KNQIFIIDAGIKFADTALTGIKGIIPDYTYLAERYK 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L + V ++A AI L+ K ++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVIHLMKQVAVKKIFAPRIAIQYLKLKFDENKIKNKVEFIEIEK 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G S++ HSIP+ + I++P G+I+ TGD++ D + I TD L Sbjct: 121 SAVHTFGECSVDFWTAQHSIPDAFGIRIKTPNGSIMCTGDFRFDYNPIGEIYTDFARLDQ 180 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG EG+ L+ DSTNAMR SE I +I M+ A ++T F+S+++R+ +II+ Sbjct: 181 IGKEGLTVLLSDSTNAMRPFHSPSENDILTDIEKYMRQATRKTIITAFASNLTRVTAIIE 240 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A ++G+K+ G S+ + + + +G IK +F+ + P + L+++ TGSQGE Sbjct: 241 LAVKLGKKVAAFGRSMVQGIKIGRKLGYIKAPASVFVDKKDVSKVPDKDLVILTTGSQGE 300 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL+++S G+ ++VK+ + D +IFSS IPGN + I + NRL + G + + Sbjct: 301 QLAALSRMSYGKHQSVKIEKGDMIIFSSSPIPGNRMVIELLVNRLSKLGAIIKENGVDGY 360 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKML 422 +H SGH Y ++ +++Q +P+ + HGE + H + A++ G+ + G++ Sbjct: 361 LHTSGHAYKHEHDKIFQLTKPKYFLPYHGEFRMSIVHGQSAIRNGVKPENIMIPEIGRVY 420 Query: 423 RLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 + + I D ++ G DG + + +R +L+ G +++ + ++ N I Sbjct: 421 NMINEEITQTDEKIDCGPIYIDGHTTLNLSANILKERAKLADSGFVNMILNINKKTNSIV 480 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVI-TTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P ++ G Y ++ + + + + ++ L++ I L +L Sbjct: 481 GRPSLISRG-SFYVKTSLELVEEAKRIAHGAALFYIKNTPDWNIVDLKQLIIDRLENLFY 539 Query: 540 KVWGKKPLVTVFINKISRQ 558 K ++P+V I + Sbjct: 540 KEKRRRPIVVATILFTDEE 558 >gi|307126811|ref|YP_003878842.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 670-6B] gi|306483873|gb|ADM90742.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 670-6B] Length = 539 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 137/540 (25%), Positives = 242/540 (44%), Gaps = 9/540 (1%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M +++ G+ +P+++ GVD+V P++ ++ + + +F+TH H D Sbjct: 1 MEKICTLLKLESPIFVLNVGLKYPENEQLGVDVVIPNMDYLFENSDRIAGVFLTHGHADA 60 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISFQAGDKVDVGAFSIESV 139 GAL L + VPV+ S I L + KK ++D G + Sbjct: 61 IGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFNDFHVIDENTEIDFGGTVVSFF 120 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 +S+PE++ +V+++ G+IV+TGD+K D A TD L IG +G+LAL+ DS Sbjct: 121 PTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATDFARLAEIGRDGVLALLSDSA 180 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 NA SE ++ I + + +G ++V SS++SRI+ I D A++ GR+IVL G Sbjct: 181 NADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSRIQQIFDAADKTGRRIVLTGF 240 Query: 260 SLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 ++ +V AI + + + L + + + +LI++ TG GEP + L ++S G Sbjct: 241 DIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIILETGRMGEPINGLRKMSIGRH 300 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 R V++ + D V ++ E + ++N + + G V +HVSGH DL+ Sbjct: 301 RYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK--LITQSLHVSGHGNVRDLQ 358 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEV 435 M ++P+ L + GE L AH + A+ G+ + + G + V Sbjct: 359 LMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFIPKKGTTMAYENGDFVPAGSV 418 Query: 436 VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYD 494 G L DG IG ++ + R+ LS G V + ++ I + G Y Sbjct: 419 SAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKIVARARVHTRGF-VYL 477 Query: 495 GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 I + + + TV D Q D L+ + L L ++P + + + Sbjct: 478 KKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNLTKYLFDQTKRRPAILPVVME 537 >gi|224119634|ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|222858795|gb|EEE96342.1| predicted protein [Populus trichocarpa] Length = 890 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 178/569 (31%), Positives = 284/569 (49%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +P+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI + + Sbjct: 81 LRIVPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDELGVQKIIPDTTFIRRWK 136 Query: 66 KNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + + P+YAS F + L++ + + F Sbjct: 137 HKIEAVIITHGHEDHIGALPWVVPALDHNTPIYASSFTMELIKKRLKENGIFVPSRLKVF 196 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + K G F IE +RV HSIP+ LV+R G I+HTGDWK+D+ + G V D+++L Sbjct: 197 KTKRKFTAGPFEIEPIRVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETL 256 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + + + AKG ++ T F+S++ R+ S+ Sbjct: 257 EELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRRISAAKGRIITTQFASNIHRLGSV 316 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 317 KAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDSYAPKDLLIVTTGSQ 376 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G KL E+D +++S++ IPGNE + + NR+ E G ++ E Sbjct: 377 AEPRAALNLASYGSSHAFKLNEEDVILYSAKVIPGNESRVMKMMNRISEIGSTIVMGKNE 436 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 437 -LLHTSGHGYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIQHTTVIKNGEML 495 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 L + + E + ++ G +L I +R +++ G + V++ + Sbjct: 496 GVSHLRNRRVLSNGFVSLGKENLQLMYNDGDKAFGTSTELCIDERLKIASDGIVVVSMEI 555 Query: 474 DN--------HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 ++ G +I D GK+ L K + P L Sbjct: 556 LRPQNLDGQVEKSLKGKIKITTR---CLWLDKGKLLDALHKAAHAALSSCPVNCP--LTH 610 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + ++S LR +++K GK+P V + Sbjct: 611 MERTVSEMLRKMVRKYSGKRPEVIAIAVE 639 >gi|302786496|ref|XP_002975019.1| hypothetical protein SELMODRAFT_102611 [Selaginella moellendorffii] gi|300157178|gb|EFJ23804.1| hypothetical protein SELMODRAFT_102611 [Selaginella moellendorffii] Length = 829 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 177/571 (30%), Positives = 294/571 (51%), Gaps = 32/571 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G+ ++IMID G+ FP + GV V PD TFI + + Sbjct: 34 LRILPIGGLGEIGMNCMLVGHY----DRYIMIDAGLMFPDYEDFGVVKVLPDTTFISRWK 89 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L +Y++ F + L++ + + C +F Sbjct: 90 HKIEAVIITHGHEDHIGALPWVIPALDPQTRIYSTSFTLELIKRRLKDYNFPFEHRCHTF 149 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F E++RV HSIP+ L++R G I H+GDWK+D++ + G + D+++L Sbjct: 150 TMRNPFQAGPFKAEAIRVTHSIPDCCGLILRCQDGTIFHSGDWKIDENPLDGKIFDRNTL 209 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+ +M DSTN + G ISE ++K++ + AK V+ T F+S++ R+ S+ Sbjct: 210 EELGKEGVTLMMSDSTNVLSPGRTISETDVRKSLMQYVTEAKSRVISTQFASNIHRLGSM 269 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G++LK + A G + + E G Y + L+++ TGSQ Sbjct: 270 KAAADASGRKLVFIGTALKTYIDAAWKDGQAPFDPSILVKAEDMGAYSPKDLLIVTTGSQ 329 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE RSAL S G R++KL++ D +++S++ IPGNE + + NR+ E G +I + Sbjct: 330 GETRSALNLASFGSSRSLKLSKDDVILYSAKMIPGNETRVMKMLNRISETGPHIITGK-D 388 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y ++L+ + + IRPQ + +HGE L H++L GI +RNG+ML Sbjct: 389 KLLHTSGHAYRDELQELLRLIRPQHFLPVHGEYTFLKEHEQLGRASGIQHTKVIRNGEML 448 Query: 423 RLFP---------DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + P + E + ++ G +DL + +R+ ++F G + V + Sbjct: 449 GVSPLRNRRVLSSGFAALGKEDLQLMYNDGEKAFGTASDLRVDERKHIAFDGIIIVRYEV 508 Query: 474 ----------DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 + Y + I D GK+ + L + V Q DL Sbjct: 509 YDDNYASRLDGSEYGLRARIRITTR---CLWLDQGKLTEALHRAANAAVGSCKQD--ADL 563 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINK 554 + + ++++ LR + +K K+P V + Sbjct: 564 QTVERTVATVLRKVAQKYNNKRPEVVAIATE 594 >gi|193216527|ref|YP_001999769.1| metallo-beta-lactamase superfamily protein [Mycoplasma arthritidis 158L3-1] gi|193001850|gb|ACF07065.1| metallo-beta-lactamase superfamily protein [Mycoplasma arthritidis 158L3-1] Length = 594 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 156/554 (28%), Positives = 272/554 (49%), Gaps = 14/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG EIG + + Y + +ID G+ F + G+ PD T++ + + Sbjct: 5 KIFGLGGFQEIGKSTLVIEY-----DQIFIIDTGIKFSDTYVTGISGCIPDYTYLKENKD 59 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +FITH HEDH G + L + + +YA AI L+ K R+ K++ I Sbjct: 60 RIAGLFITHGHEDHIGGVPHLVRQVDIQRIYAPRIAIQYLKLKFEDLRIKKRVEFIEINK 119 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D + G S++ HSIP+ + +++P G+++ TGD++ D I +TD L Sbjct: 120 DDVFEFGECSVDFWTAQHSIPDAFGIRVKTPNGSLMMTGDFRFDYHPIGN-LTDFSKLEK 178 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG EG+ L DSTNAMR SE I K+I M+ AKG ++VT F+S+++RI++II+ Sbjct: 179 IGKEGLDVLFSDSTNAMRPNHSPSESDILKDIGKYMQEAKGKIIVTAFASNLTRIKAIIE 238 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A ++ +K+V G S+ V + +G I ++F+ ++ Y +L+++ TGSQGE Sbjct: 239 LAAKMNKKVVAFGRSMVDGVDIGKRLGYIDAPKEVFIDKKTISKYDESELLILTTGSQGE 298 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + LA++S + +VK+ DT+IFSS IPGN I + NRL + G + + Sbjct: 299 ELAGLAKMSFEKHPHVKIKPGDTIIFSSSPIPGNRSKIELLVNRLYKLGAIIRENGVDGY 358 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKML 422 +H SGH Y + ++++ +P+ + HGE V H A + G+ V + G++ Sbjct: 359 LHTSGHAYKEEHRKIFNLTKPKYFMPYHGEYRMSVVHGYTATECGVAPENVIIHKLGEVY 418 Query: 423 RLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 L I + D ++ G DG ++ + + +R +L+ G L V V ++ N I Sbjct: 419 HLVNHKITLSDEKMDFGPIFIDGNILSETNSQILNERMELAQNGFLHVIVAINKEKNLIL 478 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITT-VVDLPQFRRKDLKLLRESISSALRSLLK 539 G P IV G Y + + + + V + + ++ L++ + L Sbjct: 479 GKPRIVSRG-AFYVRNSLHLIEEAKRIVHGAMLYTIKNIENWNVPQLKQLMIDRLAPFFY 537 Query: 540 KVWGKKPLVTVFIN 553 + + ++ I Sbjct: 538 RHKRRNVVIIPTIL 551 >gi|317495781|ref|ZP_07954144.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316913958|gb|EFV35441.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 611 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 140/558 (25%), Positives = 270/558 (48%), Gaps = 12/558 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ PLGGV E+ NM + + ++D G+ FP+ ++ G+D V PDI++++ Sbjct: 61 TSKIRITPLGGVDEVAKNMYMIEIA----DEIFVLDAGLMFPETEMIGIDAVIPDISYLV 116 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + IF+++ H GA+ + L PVY S I LL+ + + ++I Sbjct: 117 RNKQKVRGIFLSNGHVSSMGAVPYIIDKLKCPVYGSKLTIDLLKNHLKHLGIKRRIKFYY 176 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +K D SI + +S+P+++ + I + GNIV+TG++K D +D Sbjct: 177 VKENNKYDFNNASITFFKTTYSMPDSLGICIETSQGNIVYTGEFKFDQSVSKEYKSDIVK 236 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G +G+LAL+ DS+NA +G + E + I + A ++VT ++S+ I Sbjct: 237 ISTLGKKGVLALLSDSSNANMKGYNVPENEAAEQIDNAFYQANKRIIVTCYASNFLTISH 296 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGS 301 I+ A RK++LLG +++ ++ A ++ + D+ ++ + G YP+ ++ ++++G Sbjct: 297 IVRAALGQNRKLLLLGEAIEDSINTARNMNYLAIGDENLITVDELGNYPQNEICILSSGD 356 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP A+ ++ ++ +++ DT++ ++ P EV + N LV+ G V+ A Sbjct: 357 QGEPIEAMKNIAEKNIKGIQIESGDTIMIAATPSPNMEVMLFQTLNLLVKLGAHVVT--A 414 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +H + H +LK M + P+ V + GE +L H E+A + G+ + + G Sbjct: 415 SKRLHAASHATREELKMMLNMLMPKFFVPVQGEFRNLRKHAEIAAETGVAANNIHILAKG 474 Query: 420 KMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 L + + ++I V G L DG IG D + R+ LS G + + Sbjct: 475 ATLEISGNRAKVIPNNVTVGNILVDGRGIGDVEDSVLKDRKLLSNDGIFVASYAISRKEK 534 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P I G Y ++ K + +I + P ++ ++ + S L SL Sbjct: 535 TLIGRPCIQTKGF-VYVKKSMELIKEAEEKIIEYIESNPIKSIRECAAIKAEVRSMLSSL 593 Query: 538 LKKVWGKKPLVTVFINKI 555 L +KP++ V I Sbjct: 594 LYDNTKRKPIIIVNFTLI 611 >gi|291320713|ref|YP_003515978.1| hypothetical protein MAGa8250 [Mycoplasma agalactiae] gi|240247746|emb|CAX65749.1| Conserved hypothetical protein [Mycoplasma agalactiae] gi|290753049|emb|CBH41025.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 614 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 155/554 (27%), Positives = 282/554 (50%), Gaps = 14/554 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +P+GGV EIG + + +G + ++ID G+ F G+ + PD ++ + + Sbjct: 5 RIIPIGGVQEIGKSTLIIEHG----KHIVIIDAGIKFADTATTGIKGIVPDYKYLKERKD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L +H+ +YA AI L+ K +++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPRIAIQYLKLKFEEHKITHKVEFIEIEK 120 Query: 126 GDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G ++ HSIP+ + + +P G+++ TGD++ D + I TD L Sbjct: 121 SAVHEFGNGQVKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG EG+ L+ DSTNAMR SE I +I M++A ++VT F+S+++R+++I Sbjct: 181 DAIGKEGLTVLLSDSTNAMRPFHSPSENDILIDIERHMRSATRKIIVTAFASNLTRVKAI 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID+A ++ +K+ G S+ + + + +G IK +F+ P QL+V+ TGSQ Sbjct: 241 IDLAVKLKKKVACFGRSMVQGIKIGRKLGNIKAPASIFVEKREISKVPENQLVVLTTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++S G+ N+K+ + D VIFSS IPGN + + + NRL + G + + Sbjct: 301 GEQLAALSRMSYGKHANIKIEKGDMVIFSSNPIPGNRMVVELLINRLAKLGAIIKENGPD 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGK 420 +H SGH Y ++ +++Q RP+ + HGE VAH E A++ G+ + G+ Sbjct: 361 GYLHTSGHAYKHEHDKIFQLTRPKFFMPYHGEYRMCVAHGESAVRNGVNKNNIFIPEIGQ 420 Query: 421 MLRLFPDPIEI-IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + + + I +++ +G DG + +R +L+ G +++ + +D N Sbjct: 421 VFNMIDNQIIPTTEKIEYGPIYIDGTTTLSVTGSTLKERSELANSGFVNIIMTIDKDKNE 480 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSL 537 I G P ++ G Y + + + V+ + + ++ L++ I L SL Sbjct: 481 IVGRPHLISRG-SFYVKTSLALVEEAKRIAHGAVLYHIKNSQTWNIVELKQLIIDRLESL 539 Query: 538 LKKVWGKKPLVTVF 551 K ++P++ Sbjct: 540 FYKEKRRRPIIIPT 553 >gi|238810170|dbj|BAH69960.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 644 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 152/559 (27%), Positives = 279/559 (49%), Gaps = 12/559 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +P+GGV EIG + Y + +ID G+ F L G+ + PD T++ + K Sbjct: 36 RLIPIGGVQEIGKAALIVEY----KNQIFIIDAGIKFADTALTGIKGIIPDYTYLAERYK 91 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L + V ++A AI L+ K ++ K+ I + Sbjct: 92 NIEGLFITHGHEDHIGGVIHLMKQVAVKKIFAPRIAIQYLKLKFDENKIKNKVEFIEIEK 151 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G S++ HSIP+ + I++P G+I+ TGD++ D + I TD L Sbjct: 152 SAVHTFGECSVDFWTAQHSIPDAFGIRIKTPNGSIMCTGDFRFDYNPIGEIYTDFARLDQ 211 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG EG+ L+ DSTNAMR SE I +I M+ A ++T F+S+++R+ +II+ Sbjct: 212 IGKEGLTVLLSDSTNAMRPFHSPSENDILTDIEKYMRQATRKTIITAFASNLTRVTAIIE 271 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A ++G+K+ G S+ + + + +G IK +F+ + P + L+++ TGSQGE Sbjct: 272 LAVKLGKKVAAFGRSMVQGIKIGRKLGYIKAPASVFVDKKDVSKVPDKDLVILTTGSQGE 331 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL+++S G+ ++VK+ + D +IFSS IPGN + I + NRL + G + + Sbjct: 332 QLAALSRMSYGKHQSVKIEKGDMIIFSSSPIPGNRMVIELLVNRLSKLGAIIKENGVDGY 391 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKML 422 +H SGH Y ++ +++Q +P+ + HGE + H + A++ G+ + G++ Sbjct: 392 LHTSGHAYKHEHDKIFQLTKPKYFLPYHGEFRMSIVHGQSAIRNGVKPENIMIPEIGRVY 451 Query: 423 RLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IF 480 + + I D ++ G DG + + +R +L+ G +++ + ++ N I Sbjct: 452 NMINEEITQTDEKIDCGPIYIDGHTTLNLSANILKERAKLADSGFVNMILNINKKTNSIV 511 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVI-TTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P ++ G Y ++ + + + + ++ L++ I L +L Sbjct: 512 GRPSLISRG-SFYVKTSLELVEEAKRIAHGAALFYIKNTPDWNIVDLKQLIIDRLENLFY 570 Query: 540 KVWGKKPLVTVFINKISRQ 558 K ++P+V I + Sbjct: 571 KEKRRRPIVVATILFTDEE 589 >gi|218190927|gb|EEC73354.1| hypothetical protein OsI_07566 [Oryza sativa Indica Group] Length = 871 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 179/569 (31%), Positives = 283/569 (49%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 81 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWS 136 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 137 HKIEAVIITHGHEDHIGALPWVIPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRLKVF 196 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + G F +E +RV HSIP+ LV+R G I HTGDWK+D+ + G + D+ +L Sbjct: 197 RVRKRFQAGPFEVEPLRVTHSIPDCCGLVLRCADGIIFHTGDWKIDESPVDGKIFDRQAL 256 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + ++ + AKG V+ T F+S++ RI SI Sbjct: 257 EELSKEGVTLMMSDSTNVLSPGRSISESVVAGSLLRHISEAKGRVITTQFASNIHRIGSI 316 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G + E Y L+V+ TGSQ Sbjct: 317 KAAADLTGRKLVFVGMSLRTYLDAAFRDGKSPIDPSTLVKVEDMDAYAPNDLLVVTTGSQ 376 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G +KL+++D +++S++ IPGNE + + NRL E G +++ + Sbjct: 377 AEPRAALNLASFGGSHALKLSKEDVLLYSAKVIPGNESRVMKMLNRLTELGPKIVMGK-D 435 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y ++L+ + Q ++PQ + +HGE L L H+ L GI ++NG+ML Sbjct: 436 AGLHTSGHAYHDELEEVLQIVKPQHFLPVHGELLFLKEHELLGRSTGIRHTTVIKNGEML 495 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 L + + E + ++ G DL I +R +++ G + V++ + Sbjct: 496 GVSHLRNRRVLSNGFVALGKEDLRLMYSDGDKAFGTSTDLCIDERLRIASDGVIFVSMEI 555 Query: 474 --------DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 + + G +I D G++ L K + P L Sbjct: 556 FRPQKELASSQSGLKGKFKITTR---CLWLDNGRLLDALYKAAYAALSSCPVNCP--LSH 610 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + +S LR +++K GK+P V + Sbjct: 611 MERMVSEILRKMVRKYSGKRPDVIAVATE 639 >gi|313678861|ref|YP_004056601.1| family protein [Mycoplasma bovis PG45] gi|312950450|gb|ADR25045.1| metallo-beta-lactamase family protein [Mycoplasma bovis PG45] Length = 614 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 283/561 (50%), Gaps = 14/561 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +P+GGV EIG + + + ++ ++ID G+ F G+ + PD ++ + + Sbjct: 5 RIIPIGGVQEIGKSTLIIEH----NKHIVIIDAGIKFADTATTGIKGIIPDYKYLKERKD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L +H+ +YA AI L+ K +++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPKIAIQYLKLKFDEHKITHKVEFIEIEK 120 Query: 126 GDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G ++ HSIP+ + + +P G+++ TGD++ D + I TD L Sbjct: 121 SAVHEFGNGKIKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKL 180 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AIG EG+ L+ DSTNAMR SE I I M++A ++VT F+S+++R+++I Sbjct: 181 DAIGKEGLTVLLSDSTNAMRPSHSPSENDILIGIERHMRSATRKIIVTAFASNLTRVKAI 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 ID+A ++ +K+ G S+ + + + +G IK +F+ P QL+V+ TGSQ Sbjct: 241 IDLAVKLKKKVACFGRSMVQGIKIGRKLGNIKAPSSIFVEKRDIAKVPENQLVVLTTGSQ 300 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++S G+ N+K+ + D VIFSS IPGN + + + NRL + G + + Sbjct: 301 GEQLAALSRMSYGKHANIKVEKGDMVIFSSNPIPGNRMVVELLINRLSKLGAIIKENGPD 360 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +H SGH Y ++ +++Q RP+ + HGE VAH E A++ G+ V G+ Sbjct: 361 GYLHTSGHAYKHEHDKIFQLTRPKFFIPYHGEYRMCVAHGESAIRNGVDKKNVFIPEIGQ 420 Query: 421 MLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + + + I + ++ +G DG + I +R +LS G +++ + +D N Sbjct: 421 VFNMVDNQIIPTNEKIEYGPIYIDGTTTLSISGSTIKERSELSNSGFVNIIMTIDKEKNE 480 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSL 537 I G P ++ G Y + + + V+ + ++ L++ I L +L Sbjct: 481 IVGRPHLISRG-SFYVKTSLALVEEAKRIAHGAVLYRIKNNANWNIVELKQLIIDRLEAL 539 Query: 538 LKKVWGKKPLVTVFINKISRQ 558 K ++P++ + + Sbjct: 540 FYKEKRRRPIIIPTFLFVKEE 560 >gi|148927322|ref|ZP_01810887.1| beta-lactamase domain protein [candidate division TM7 genomosp. GTL1] gi|147887278|gb|EDK72737.1| beta-lactamase domain protein [candidate division TM7 genomosp. GTL1] Length = 693 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 163/572 (28%), Positives = 284/572 (49%), Gaps = 25/572 (4%) Query: 6 LVFLPLGGVGE--IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L +P+GG+GE IG NM Y I+ID G FP D PG++ + PD++++ + Sbjct: 96 LKVMPIGGLGEMGIGKNMMAIEY----DNDIIVIDMGFLFPGADYPGINYIVPDVSYLEE 151 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE--RVSKKIPCI 121 + + TH H DH GA + + PVY S F IG+L+ + + Sbjct: 152 NKHKIRGHVFTHGHLDHIGAFRHIIHKIPAPVYGSKFTIGMLQKNMEEATTGFQPQFNIM 211 Query: 122 SFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + +A ++V +G FSIE VRVNHSIP+ A++IR+P G +V+TGDW+ +++ + G D Sbjct: 212 NPEAHERVQLGDSFSIELVRVNHSIPDATAVIIRTPAGVLVNTGDWRFEENPVDGRKFDL 271 Query: 181 DSLCAIG-NEGILALMCDSTNAMREG-TCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSV 237 L + EGI+ LM +STN EG E I+ +I D+M ++++ FSS + Sbjct: 272 TRLTEVASKEGIVLLMNESTNCESEGSHGHGEFDIRDSISDVMAKYQNNRLIISCFSSQI 331 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 R++ I++ A GRK+ G S+ + + VA+ G+IK + + E P ++ + Sbjct: 332 HRMQLILEAAAASGRKVAFAGFSMIQNLEVALRAGVIKIPKDVIVKMEDLVRMPDGKVTI 391 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TGSQGE + L +++ G +++K+ D ++FSS IPGNE + + L+ +G V Sbjct: 392 VCTGSQGEFNAVLNRMASGSHKHIKIKHSDVIVFSSNPIPGNEKYVVRTVDGLMREGSDV 451 Query: 357 IAEDAE-----CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--- 408 I P+H+SGH Y +D R+ + P+ + IHGE LV + ELA +E Sbjct: 452 IQNGKTHLTGIGPLHLSGHGYYDDHVRLITALNPKYYLPIHGEFHMLVHNAELAEKECGI 511 Query: 409 GIACVPPVRNGKMLRLFPD-PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHL 467 + +G ++ + D V G + D + +++ + R ++ G Sbjct: 512 ARDNIFVCDSGDVVEITHDAQASKTGRVPVGGIMYDDSGA-EVSEIVLKDRIHMANEGMF 570 Query: 468 SVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLL 526 V + + + P+I+ G Y D ++ L+ + + V R+ D+ +L Sbjct: 571 VVVLTVSRQTGRLLTSPDIISRGF-IYLRDSEELMGLIRQYLKQKVARSFGGRKPDIDIL 629 Query: 527 RESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 ++ + + +L + P+V IN+I + Sbjct: 630 KKELRDEIAHILYDQTHRTPIVIPVINEIGTE 661 >gi|222623010|gb|EEE57142.1| hypothetical protein OsJ_07047 [Oryza sativa Japonica Group] Length = 868 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 179/569 (31%), Positives = 283/569 (49%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 81 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWS 136 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 137 HKIEAVIITHGHEDHIGALPWVIPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRLKVF 196 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + G F +E +RV HSIP+ LV+R G I HTGDWK+D+ + G + D+ +L Sbjct: 197 RVRKRFQAGPFEVEPLRVTHSIPDCCGLVLRCADGIIFHTGDWKIDESPVDGKIFDRQAL 256 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + ++ + AKG V+ T F+S++ RI SI Sbjct: 257 EELSKEGVTLMMSDSTNVLSPGRSISESVVAGSLLRHISEAKGRVITTQFASNIHRIGSI 316 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G + E Y L+V+ TGSQ Sbjct: 317 KAAADLTGRKLVFVGMSLRTYLDAAFRDGKSPIDPSTLVKVEDMDAYAPNDLLVVTTGSQ 376 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G +KL+++D +++S++ IPGNE + + NRL E G +++ + Sbjct: 377 AEPRAALNLASFGGSHALKLSKEDVLLYSAKVIPGNESRVMKMLNRLTELGPKIVMGK-D 435 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y ++L+ + Q ++PQ + +HGE L L H+ L GI ++NG+ML Sbjct: 436 AGLHTSGHAYHDELEEVLQIVKPQHFLPVHGELLFLKEHELLGRSTGIRHTTVIKNGEML 495 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 L + + E + ++ G DL I +R +++ G + V++ + Sbjct: 496 GVSHLRNRRVLSNGFVALGKEDLRLMYSDGDKAFGTSTDLCIDERLRIASDGVIFVSMEI 555 Query: 474 --------DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 + + G +I D G++ L K + P L Sbjct: 556 FRPQKELASSQSGLKGKFKITTR---CLWLDNGRLLDALYKAAYAALSSCPVNCP--LSH 610 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + +S LR +++K GK+P V + Sbjct: 611 MERMVSEILRKMVRKYSGKRPDVIAVATE 639 >gi|54020126|ref|YP_115800.1| serine protease [Mycoplasma hyopneumoniae 232] gi|53987299|gb|AAV27500.1| putative serine protease, subtilase family active site [Mycoplasma hyopneumoniae 232] Length = 813 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 9 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 65 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 124 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 125 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 184 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 244 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 304 LAALDRMSNRKHPKISIEPRDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 363 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 364 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 423 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V V D N I G Sbjct: 424 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLVPFDRQKNSING 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 484 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 542 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 543 TKRWKPVILTQILYVDQ 559 >gi|72080434|ref|YP_287492.1| hypothetical protein MHP7448_0092 [Mycoplasma hyopneumoniae 7448] Length = 817 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 143/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 5 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 61 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 121 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 180 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 240 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 299 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 300 LAALDRMSNRKHPKISIEPQDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 359 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 360 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 419 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V + D N I G Sbjct: 420 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLIPFDRQKNSING 479 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 480 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 538 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 539 TKRWKPVILTQILYVDQ 555 >gi|144575278|gb|AAZ53469.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 821 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 143/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 9 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 65 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 124 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 125 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 184 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 244 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 304 LAALDRMSNRKHPKISIEPQDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 363 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 364 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 423 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V + D N I G Sbjct: 424 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLIPFDRQKNSING 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 484 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 542 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 543 TKRWKPVILTQILYVDQ 559 >gi|42568733|ref|NP_201147.2| emb2746 (embryo defective 2746); DNA binding / catalytic/ hydrolase [Arabidopsis thaliana] gi|28393617|gb|AAO42228.1| unknown protein [Arabidopsis thaliana] gi|62319893|dbj|BAD93952.1| putative protein [Arabidopsis thaliana] gi|332010363|gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 911 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 178/565 (31%), Positives = 286/565 (50%), Gaps = 26/565 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID G+ FP D PG+ + PD FI + + Sbjct: 110 LRILPIGGLGEIGMNCMLVG----NYDRYILIDAGIMFPDYDEPGIQKIMPDTGFIRRWK 165 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L + P++AS F + L++ + + + +F Sbjct: 166 HKIEAVVITHGHEDHIGALPWVIPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTF 225 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE + V HSIP+ L +R GNI+HTGDWK+D+ + G V D+++L Sbjct: 226 STRRRFMAGPFEIEPITVTHSIPDCSGLFLRCADGNILHTGDWKIDEAPLDGKVFDREAL 285 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISEK + + + AKG V+ T F+S++ R+ SI Sbjct: 286 EELSKEGVTLMMSDSTNVLSPGRTISEKVVADALVRNVMAAKGRVITTQFASNIHRLGSI 345 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 346 KAAADITGRKLVFVGMSLRTYLEAAWRDGKAPIDPSSLIKVEDIEAYAPKDLLIVTTGSQ 405 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G KL ++D +++S++ IPGNE + + NR+ + G +I E Sbjct: 406 AEPRAALNLASYGSSHAFKLTKEDIILYSAKVIPGNESRVMKMMNRIADIGPNIIMGKNE 465 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 466 M-LHTSGHAYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEML 524 Query: 423 --------RLFPDPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLSVNVLL 473 R+ + + L DG G ++L I +R ++S G + +++ + Sbjct: 525 GVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKAFGTSSELCIDERLRISSDGIIVLSMEI 584 Query: 474 ----DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 + + G I D G++ L K + P L + + Sbjct: 585 MRPGVSENTLKGKIRITTR---CMWLDKGRLLDALHKAAHAALSSCPVTCP--LSHMERT 639 Query: 530 ISSALRSLLKKVWGKKPLVTVFINK 554 +S LR +++K GK+P V + Sbjct: 640 VSEVLRKIVRKYSGKRPEVIAIATE 664 >gi|147856240|emb|CAN81787.1| hypothetical protein VITISV_026006 [Vitis vinifera] Length = 1616 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 176/560 (31%), Positives = 275/560 (49%), Gaps = 44/560 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 840 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWS 895 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 896 HKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEFGIFVPSRLKVF 955 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + K G F IE +RV HSIP+ LVIR G I+HTGDWK+D+ + G V D+++L Sbjct: 956 RTRKKFIAGPFEIEPIRVTHSIPDCCGLVIRCADGTILHTGDWKIDESPLDGKVFDREAL 1015 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + + + +AKG V+ T F+S++ R+ S+ Sbjct: 1016 EELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISSAKGRVITTQFASNIHRLGSV 1075 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 1076 KAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQ 1135 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G ++KL+++D +++S++ IPGNE + + NR+ E G +I E Sbjct: 1136 AEPRAALNLASYGSSHSLKLSKEDIILYSAKVIPGNETRVMKMLNRVSEIGSTIIMGKNE 1195 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI + N Sbjct: 1196 G-LHTSGHGYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTLMYN---- 1250 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV------LLD-- 474 G +L I +R +++ G + +++ ++D Sbjct: 1251 -------------------DGDKAFGTSTELCIDERLRIASDGIIVISMEILRPQVVDGV 1291 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 ++ G I D GK+ L K + P L + ++S L Sbjct: 1292 TEKSLKGKIRITTR---CLWLDKGKLLDALHKAAHAALSSCPVNCP--LAHMERTVSEVL 1346 Query: 535 RSLLKKVWGKKPLVTVFINK 554 R +++K K+P V + Sbjct: 1347 RKMVRKYSSKRPEVIAIAIE 1366 >gi|312601062|gb|ADQ90317.1| Putative serine protease, subtilase family active site [Mycoplasma hyopneumoniae 168] Length = 818 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 9 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 65 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 124 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 125 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 184 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 244 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 304 LAALDRMSNRKHPKISIEPRDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 363 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 364 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 423 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V V D N I G Sbjct: 424 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLVPFDRQKNSING 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 484 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 542 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 543 TKRWKPVILTQILYVDQ 559 >gi|144227463|gb|AAZ44183.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 816 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 9 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 64 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 65 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 124 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 125 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 183 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 184 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 243 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 244 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 303 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 304 LAALDRMSNRKHPKISIEPRDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 363 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 364 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 423 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V V D N I G Sbjct: 424 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLVPFDRQKNSING 483 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 484 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 542 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 543 TKRWKPVILTQILYVDQ 559 >gi|71893448|ref|YP_278894.1| hypothetical protein MHJ_0089 [Mycoplasma hyopneumoniae J] Length = 812 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 273/557 (49%), Gaps = 12/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LGG+ EIG + + ++ID G+ F G+ + P+ ++ +++ Sbjct: 5 RFFGLGGMQEIGKSTLVIE----DDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQA 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+TH HEDH G + L + + ++A AI L+AK +++ KI I Sbjct: 61 KIRGLFVTHGHEDHIGGIIFLVQEVDIKKIFAPKIAIQYLKAKFEDQKIRPKIEFIEINK 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +F+++ HSIP+ + I S G+I+ TGD++ D I TD + L Sbjct: 121 NDTHRFESFTVDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFDYTPIGNY-TDFERLKE 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IGN+ + L DSTNAMR SE+ I +I M++A +++T F+S+++RI+++I+ Sbjct: 180 IGNQKLTVLFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIITAFASNLTRIKALIE 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I ++ +KI++ G S+ +++ G I D ++ Q++++ TGSQGE Sbjct: 240 IGIKLEKKILVFGRSMVNGINIGRRSGYINVDDNVFLGKNLEGVEENQMLILTTGSQGEQ 299 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +AL ++S + + + +D +IFSS IPGN++ I H+ NRL + + + + Sbjct: 300 LAALDRMSNRKHPKISIEPRDLIIFSSSPIPGNKIKIEHLINRLYKLSAIIKENGPDGYL 359 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLR 423 H SGH Y + ++++Q +P+ HGE +AH A++ G+ V NG++ + Sbjct: 360 HTSGHAYKAEHEKIFQLTKPKYFFPYHGEYRMCLAHSRTAIESGVDPKNVIIPENGQVFK 419 Query: 424 LFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFG 481 ++ I + +++ DG I + I +R+++ G + V V D N I G Sbjct: 420 MYNQEIYKTNEKIPCDPVYIDGETISRDNSRIINERQEMRENGFVFVLVPFDRQKNSING 479 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSALRSLLKK 540 ++ G +G +I + + ++ + + K +++ I + L S + Sbjct: 480 RISVITKG-AFSTKNGTQIIAEIRRLCFASIKFFIEKQPKWSPPQIKQLIKNRLNSYFHR 538 Query: 541 VWGKKPLVTVFINKISR 557 KP++ I + + Sbjct: 539 TKRWKPVILTQILYVDQ 555 >gi|297793923|ref|XP_002864846.1| EMB2746 [Arabidopsis lyrata subsp. lyrata] gi|297310681|gb|EFH41105.1| EMB2746 [Arabidopsis lyrata subsp. lyrata] Length = 927 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 179/565 (31%), Positives = 286/565 (50%), Gaps = 26/565 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID G+ FP D PGV + PD FI + + Sbjct: 109 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGIMFPDYDEPGVQKIMPDTGFIRRWK 164 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L + P++AS F + L++ + + + +F Sbjct: 165 HKIEAVVITHGHEDHIGALPWVIPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTF 224 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE + V HSIP+ L +R GNI+HTGDWK+D+ + G V D+++L Sbjct: 225 STRRRFMAGPFEIEPITVTHSIPDCSGLFLRCADGNILHTGDWKIDEAPLDGKVFDREAL 284 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISEK + + + AKG V+ T F+S++ R+ SI Sbjct: 285 EELSKEGVTLMMSDSTNVLSPGRTISEKVVADALVRNVMAAKGRVITTQFASNIHRLGSI 344 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 345 KAAADLTGRKLVFVGMSLRTYLEAAWRDGKAPIDPSSLIKVEDIEAYAPKDLLIVTTGSQ 404 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G KL ++D +++S++ IPGNE + + NR+ + G +I E Sbjct: 405 AEPRAALNLASYGSSHAFKLTKEDIILYSAKVIPGNESRVMKMMNRIADIGPNIIMGKNE 464 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 465 M-LHTSGHAYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEML 523 Query: 423 --------RLFPDPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLSVNVLL 473 R+ + + L DG G ++L I +R ++S G + +++ + Sbjct: 524 GVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKAFGTSSELCIDERLRISSDGIIVLSMEI 583 Query: 474 ----DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 + + G I D G++ L K + P L + + Sbjct: 584 MRPGVSENTLRGKIRITTR---CMWLDKGRLLDALHKAAHAALSSCPVNCP--LSHMERT 638 Query: 530 ISSALRSLLKKVWGKKPLVTVFINK 554 +S LR +++K GK+P V + Sbjct: 639 VSEVLRKIVRKYSGKRPEVIAIATE 663 >gi|225456284|ref|XP_002279798.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 886 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 182/569 (31%), Positives = 287/569 (50%), Gaps = 30/569 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 78 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWS 133 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 134 HKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEFGIFVPSRLKVF 193 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + K G F IE +RV HSIP+ LVIR G I+HTGDWK+D+ + G V D+++L Sbjct: 194 RTRKKFIAGPFEIEPIRVTHSIPDCCGLVIRCADGTILHTGDWKIDESPLDGKVFDREAL 253 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + + + +AKG V+ T F+S++ R+ S+ Sbjct: 254 EELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISSAKGRVITTQFASNIHRLGSV 313 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 314 KAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQ 373 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G ++KL+++D +++S++ IPGNE + + NR+ E G +I E Sbjct: 374 AEPRAALNLASYGSSHSLKLSKEDIILYSAKVIPGNETRVMKMLNRVSEIGSTIIMGKNE 433 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 434 G-LHTSGHGYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEML 492 Query: 423 ---------RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNV-- 471 L I + E + ++ G +L I +R +++ G + +++ Sbjct: 493 GVSHLRNRRVLSNGFISLGKENLQLMYNDGDKAFGTSTELCIDERLRIASDGIIVISMEI 552 Query: 472 ----LLD--NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 ++D ++ G I D GK+ L K + P L Sbjct: 553 LRPQVVDGVTEKSLKGKIRITTR---CLWLDKGKLLDALHKAAHAALSSCPVNCP--LAH 607 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINK 554 + ++S LR +++K K+P V + Sbjct: 608 MERTVSEVLRKMVRKYSSKRPEVIAIAIE 636 >gi|329768910|ref|ZP_08260337.1| hypothetical protein HMPREF0433_00101 [Gemella sanguinis M325] gi|328836627|gb|EGF86285.1| hypothetical protein HMPREF0433_00101 [Gemella sanguinis M325] Length = 631 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 140/556 (25%), Positives = 275/556 (49%), Gaps = 12/556 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLGGV E+ NM + + ++D G+ FP+ ++ G+D V PDI+++++ Sbjct: 83 KIRITPLGGVEEVAKNMYMVEIA----DEIFVLDAGLMFPETEMIGIDAVIPDISYLVRN 138 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ + IF+++ H GA+ + L PVY S I LL+ + + ++I + Sbjct: 139 KQKVKGIFLSNGHVSSMGAIPYIIDKLKCPVYGSKLTIDLLKNHLKHLGIKRRIKFYYVK 198 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +K + ++ + +S+P+++ + I + GNIV+TG++K D +D + Sbjct: 199 ENNKYEFNNANVTFFKTTYSMPDSLGICIETSQGNIVYTGEFKFDQSVSKEYKSDIVKIS 258 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G +G+LAL+ DS+NA +G + E + I + A ++VT ++S+ I I+ Sbjct: 259 TLGQKGVLALLSDSSNANVKGYNVPENEAAEQIDNAFYKANKRIIVTCYASNFLTISHIV 318 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 A RKI+LLG +++ ++ A D+ + +D+ +S E+ YP+ ++ ++++G QG Sbjct: 319 KAALTQNRKILLLGEAIQDSINTARDMKYLNIEDENLISIENLKDYPQNEICILSSGDQG 378 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 EP A+ ++ +++ +++ E DT++ ++ P EV + N LV+ G V+ A Sbjct: 379 EPIEAMKNMAEKKIKGIQIDEGDTIMIAATPSPNMEVMLFQTLNLLVKLGAHVVT--ASK 436 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 +H + H +LK M + P+ + + GE +L H E+A + G+ + ++ G Sbjct: 437 RLHAASHATREELKMMLNMLMPKHFIPVQGEFRNLRKHAEIAEETGVSKENIHILQKGTT 496 Query: 422 LRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L + + + I V G L DG IG D + R+ LS G + + + Sbjct: 497 LEISGNKTKTIPNNVPIGNILVDGRGIGDVEDSVLKDRKVLSNDGIFVTSYAISRKEKTL 556 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 G P I G Y ++ K + VI + + P ++ ++ I + L SLL Sbjct: 557 VGRPCIQTKGF-VYVKKSTELIKEAEEKVIDYLENNPIKNIRECAAVKAEIRNMLASLLY 615 Query: 540 KVWGKKPLVTVFINKI 555 +KP++ V + + Sbjct: 616 DNTKRKPIIIVNFSLV 631 >gi|51971236|dbj|BAD44310.1| putative protein [Arabidopsis thaliana] Length = 911 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 177/565 (31%), Positives = 285/565 (50%), Gaps = 26/565 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID G+ FP D PG+ + PD FI + + Sbjct: 110 LRILPIGGLGEIGMNCMLVG----NYDRYILIDAGIMFPDYDEPGIQKIMPDTGFIRRWK 165 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L + P++AS F + L++ + + + +F Sbjct: 166 HKIEAVVITHGHEDHIGALPWVIPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTF 225 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE + V HSIP+ L +R GNI+HTGDWK+D+ + G V D+++L Sbjct: 226 STRRRFMAGPFEIEPITVTHSIPDCSGLFLRCADGNILHTGDWKIDEAPLDGKVFDREAL 285 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISEK + + + AK V+ T F+S++ R+ SI Sbjct: 286 EELSKEGVTLMMSDSTNVLSPGRTISEKVVADALVRNVMAAKERVITTQFASNIHRLGSI 345 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 346 KAAADITGRKLVFVGMSLRTYLEAAWRDGKAPIDPSSLIKVEDIEAYAPKDLLIVTTGSQ 405 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G KL ++D +++S++ IPGNE + + NR+ + G +I E Sbjct: 406 AEPRAALNLASYGSSHAFKLTKEDIILYSAKVIPGNESRVMKMMNRIADIGPNIIMGKNE 465 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML Sbjct: 466 M-LHTSGHAYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEML 524 Query: 423 --------RLFPDPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLSVNVLL 473 R+ + + L DG G ++L I +R ++S G + +++ + Sbjct: 525 GVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKAFGTSSELCIDERLRISSDGIIVLSMEI 584 Query: 474 ----DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRES 529 + + G I D G++ L K + P L + + Sbjct: 585 MRPGVSENTLKGKIRITTR---CMWLDKGRLLDALHKAAHAALSSCPVTCP--LSHMERT 639 Query: 530 ISSALRSLLKKVWGKKPLVTVFINK 554 +S LR +++K GK+P V + Sbjct: 640 VSEVLRKIVRKYSGKRPEVIAIATE 664 >gi|149001775|ref|ZP_01826748.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] gi|147760233|gb|EDK67222.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] Length = 402 Score = 399 bits (1024), Expect = e-108, Method: Composition-based stats. Identities = 137/401 (34%), Positives = 215/401 (53%), Gaps = 7/401 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K EE+ +GG+GEIG N Y + I++D G+ FP+DDL G+D V PD ++ Sbjct: 5 LKPEEVGVFAIGGLGEIGKNTYGIEY----QDEIIIVDAGIKFPEDDLLGIDYVIPDYSY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I+ + A+ ITH HEDH G + L +VP+YA P A+ L+ K + + Sbjct: 61 IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ R HSIPE + +VI +P G IV TGD+K D + + D Sbjct: 121 YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVG-EPADL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + A+G EG+L L+ DSTNA SEK + ++I I++ +G ++ +F+S++ R+ Sbjct: 180 HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + + A + GRKI + G S+++ + ID+G IK F+ YP +++++ T Sbjct: 240 QQATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGEP +AL++++ G R V+L DTVIFSS IPGN ++ + N + E GV VI Sbjct: 300 GSQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHG 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 +H SGH + K M I+P+ + +HGE Sbjct: 360 KVN-NIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKV 399 >gi|282851674|ref|ZP_06261039.1| conserved hypothetical protein [Lactobacillus gasseri 224-1] gi|282557642|gb|EFB63239.1| conserved hypothetical protein [Lactobacillus gasseri 224-1] Length = 491 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 136/491 (27%), Positives = 235/491 (47%), Gaps = 9/491 (1%) Query: 71 IFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 + +TH HEDH G + L + +PVYA+PFA+ L+ K + + Sbjct: 1 MVVTHGHEDHIGGIPYLLKKIPEIPVYATPFALALIRGKLDEHGILNSSELHEEHEDTVL 60 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGN 188 S+ R HSIP+T+ + + +P G +V TGD+K D ++ D + +G Sbjct: 61 KFDKLSVSFFRTTHSIPDTLGIAVHTPEGAVVFTGDFKFDLTPVMSQPAPDFQKMAKLGQ 120 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 EG+LAL+ DSTNA SE+ + +++DI+ KG ++ TF+S++ R+ + I A Sbjct: 121 EGVLALLSDSTNAEVPTFTKSERFVAHSLHDIITGIKGRIIFATFASNLYRVSTAIKAAV 180 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 GRK+ + G S++ V ID+G + + + P E+ +++ TGSQGEP + Sbjct: 181 DTGRKVAIFGRSMENGVQNGIDLGYLNIPEGTLVDANEINHTPPEKAMILCTGSQGEPLA 240 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 AL++++ G R + L DTVIFSS IPGN ++ H+ N+L E G V+ VH Sbjct: 241 ALSRIADGTHRQISLQPGDTVIFSSNPIPGNTTSVNHLINKLTEAGANVVHGKIH-NVHT 299 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLF 425 SGH + K M + +P+ + +HGE V H E A G+ ++NG +L L Sbjct: 300 SGHAGQEEQKMMIELTKPEYFIPVHGEYRMQVVHTETAQSTGMAKDHTFVLKNGDVLALT 359 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPE 484 D I + D ++ + R+ L+ G + V +D H + P+ Sbjct: 360 KDSSRIAGHINIPDVFVDTSGSDDVGNIVVRDRQILAEEGLVVVVATVDYKHQRVLAGPD 419 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVV-DLPQFRRKDLKLLRESISSALRSLLKKVWG 543 I+ G Y + ++ K V + ++ + + +R++I L+ L Sbjct: 420 ILSRGF-VYMRESTELISQAQKHVYHILKTEMAKDPQPKENEIRKAIIENLQDFLYSKTE 478 Query: 544 KKPLVTVFINK 554 ++P++ + + Sbjct: 479 RRPMILPMLIE 489 >gi|332295448|ref|YP_004437371.1| RNA-metabolising metallo-beta-lactamase [Thermodesulfobium narugense DSM 14796] gi|332178551|gb|AEE14240.1| RNA-metabolising metallo-beta-lactamase [Thermodesulfobium narugense DSM 14796] Length = 532 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 156/541 (28%), Positives = 279/541 (51%), Gaps = 16/541 (2%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 M L+ S R I++DCG+ FP L+ D +++ ++ + A+FITH HEDH Sbjct: 1 MTLFE----SERSLIVLDCGIKFPDPS-FESSLLTADFQYVIDKKDKVKALFITHGHEDH 55 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCISFQAGDKVDVGAFSIESV 139 GA+ L ++VP+Y + +G++ AK ++S K + + + + V +ES Sbjct: 56 IGAIPFLLKKVNVPIYGTKLTLGMVRAKLKDYKISSKDVTFHEINSNEIIFVDDMFVESF 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 VNHSIP+ + I +P G I+H+GD+K D I T+ + L +I ++GI LM D T Sbjct: 116 HVNHSIPDGVGYAIHTPHGTIIHSGDFKFDQTPIDRKTTEYNKLVSISSKGIDLLMLDIT 175 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 N REG SE+ + + +D+ + G +++TTF+S++ R++ I+ + RK +LG Sbjct: 176 NVEREGFTPSERVVGEKFFDVFRKVNGRIILTTFASNIHRVQQAINASIAFDRKFCILGK 235 Query: 260 SLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 S+ VS+A ++G + ++ L +P E+ +I TGSQGEP S L +++ + Sbjct: 236 SMINTVSIAKELGYLSFPEEYQLKQHELKNHPLEKTTIITTGSQGEPLSVLTRIANNNHK 295 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 +VK+ DTVI S+ IPGNE + N+L + G V+ E VHVSGH D+K Sbjct: 296 DVKIFPNDTVIISASPIPGNETLVNKTINKLFKLGAEVLYE-PNHRVHVSGHGSKEDIKL 354 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVV 436 + ++P+ L+ HGE H+ +LA + +NG ++ L ++I+DE+ Sbjct: 355 LINLVKPKNLLPFHGEFRHMKHFSDLAQSLSYSKENIILAKNGAVVELNNGEVKIVDEIA 414 Query: 437 HGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFGVPEIVDIGIPAYDG 495 + G I +F +R+++S G + +++ D I P I +G+ Sbjct: 415 IRNMIASGSEIIEFNKSSFLERKKISDEGLILISLTFDPEKFKILAEPRIKTLGL---KN 471 Query: 496 DGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 I K + + + + P + ++ + L + IS++++ L+ + K P + + K+ Sbjct: 472 QENIIQKEIESAIYSFFLKSP--KIENTQKLEDKISNSIKELVFSQYRKYPAIFIQAIKL 529 Query: 556 S 556 + Sbjct: 530 N 530 >gi|168046126|ref|XP_001775526.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673196|gb|EDQ59723.1| predicted protein [Physcomitrella patens subsp. patens] Length = 582 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 180/560 (32%), Positives = 283/560 (50%), Gaps = 24/560 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++IMID G+ FP D G+ V PD FI + R Sbjct: 30 LRVLPIGGLGEIGMNCMLVG----NYDRYIMIDAGLMFPDYDDLGIQKVLPDTQFIHRWR 85 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YA+ F + L++ + + + +F Sbjct: 86 DKIEAVIITHGHEDHIGALPWVIPALDPKTPIYATGFTMQLIKRRLKEYNIPAEGRLRTF 145 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + D G F IE +RV HSIP+ LV+R G I HTGDWK+D+ + G+V D+ +L Sbjct: 146 SMRARFDAGPFEIEPIRVTHSIPDCCGLVLRCADGTIFHTGDWKIDESPVDGNVFDRVAL 205 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT-FSSSVSRIRS 242 + EG+ +M DSTN + G SE + + + + AKG ++TT F+S+V R+ Sbjct: 206 EQLQKEGVTLMMSDSTNVLSPGRTTSEADVAEALMRKIVEAKGRRVITTQFASNVHRLGC 265 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGS 301 + AE GRK+V +G SLK + A G D + + E Y QL+++ TGS Sbjct: 266 VKAAAEVSGRKLVFIGLSLKTYLEAAWRDGQAPFDPAILVKAEDMDAYAPSQLLIVTTGS 325 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 Q EPR+AL S G R +KL + D +++S++ IPGNE + + NR+ E G ++ Sbjct: 326 QAEPRAALNLASMGSSRLLKLHKDDVILYSAKMIPGNETRVMKMMNRIAELGPNLVMGRG 385 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 E +H SGH Y +L+ + + ++PQ + +HGE L H+ L +GI ++NG+M Sbjct: 386 E-NLHTSGHAYRGELEEVLRLVKPQHFLPVHGEFAFLKEHELLGKAQGIRHTAVIKNGEM 444 Query: 422 LRLFP---------DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSV-NV 471 L + P ++ E + ++ G ADL I +R ++ G + + Sbjct: 445 LGVAPLRNGRVLSSGFSQLGREKLKLMYNDGDKAFGTAADLCIQERMNIALEGLVIARDD 504 Query: 472 LLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + + G I D GK+ + L + + + R L + +S Sbjct: 505 DDGDELGLQGRVRITTR---CLWTDNGKLLESLQRAADVALASSRKDAR--LPTIERHVS 559 Query: 532 SALRSLLKKVWGKKPLVTVF 551 LR +++K K+P V V Sbjct: 560 VVLRKVVQKYSNKRPDVIVI 579 >gi|255088049|ref|XP_002505947.1| predicted protein [Micromonas sp. RCC299] gi|226521218|gb|ACO67205.1| predicted protein [Micromonas sp. RCC299] Length = 791 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 168/589 (28%), Positives = 283/589 (48%), Gaps = 50/589 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FLPLGG+GEIGMN AL G + +++++D G+ FP + G+ V PD++F+ + R Sbjct: 134 IKFLPLGGLGEIGMNCALVG----TENRYVLLDAGLMFPDHEELGIQKVLPDVSFLARWR 189 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKK-IPCIS 122 + A+ ITH HEDH GAL + L PVYA F + L++ + + Sbjct: 190 DKVEAVLITHGHEDHIGALPWVIPALDPDTPVYAGLFTMQLIQRRMKEFNLWGDGSRFKV 249 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 G++ D G F +E+VRV HSIP+ L+ R G +VHTGDWK+D++ + G D++ Sbjct: 250 IDMGERFDAGPFEMEAVRVTHSIPDCCGLIFRCAAGTVVHTGDWKIDENPVDGLNFDREQ 309 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 +G EG+ +M DSTN + G ISE I+ ++ + G ++ T F+S++ R+ Sbjct: 310 FERVGKEGVTLMMSDSTNVLSPGRTISESLIRDSMVQKVLGHNGRIITTQFASNIHRLYG 369 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVG-IIKKDQLFLSDESFGLYPREQLIVIATGS 301 + A+ GRKI +G SL + A G + E +LIV+ TGS Sbjct: 370 VKAAADASGRKIAFVGMSLNTYLEAAKKAGIHPIDPDELVPAEEIENVNPNELIVVTTGS 429 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGE R+ LAQ + G R + L D +++S++ IPGNE + + N + +G ++ + Sbjct: 430 QGEDRAQLAQAAFGGSRLLTLQPDDLLLYSAKMIPGNEKRVMRMMNAIAARGPQIAMKRE 489 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + +H SGH Y ++L+ + + + P+ + +HGE L H+ LA + G+ + NG+M Sbjct: 490 DG-LHSSGHAYRDELEEILKMLNPEHFLPVHGEYAFLKEHELLARECGVRHSTVIGNGQM 548 Query: 422 LRLFP----------DPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLSVN 470 L + P + ++ E DG G DL I +R +++ G + V+ Sbjct: 549 LGVTPLRNGRSHGTLGNLHLLGEARLQTMFNDGGKGSGTSEDLAIEERMRIATEGIVVVD 608 Query: 471 V-LLDNH------------------------YNIFGVPEIVDIGIPAYDGDGGKIHKLLL 505 + + DN + + + D G++ + Sbjct: 609 LEVFDNPPAQDAPAADADADADAPDGERRGGGYMTARARVTSR---SMWTDEGRMLAKIR 665 Query: 506 KTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 +V L R L + + +SA+R + GK+P V V ++ Sbjct: 666 DAAERSVQALESGAR--LSAVERTCASAVRFEARAYSGKRPDVIVVAHR 712 >gi|307106517|gb|EFN54762.1| hypothetical protein CHLNCDRAFT_35723 [Chlorella variabilis] Length = 814 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 163/579 (28%), Positives = 267/579 (46%), Gaps = 42/579 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G ++I++D G+ FP G+ + PD +F+ + R Sbjct: 94 LRVLPIGGLGEIGMNCMLIGVY----DRYILVDAGLMFPDFTDLGMQKILPDTSFLAQWR 149 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL +W L P+YA F + L++ + + + C Sbjct: 150 DKIEAVVITHGHEDHIGALPWVWPALDPSTPIYAGAFPMQLIKRRLQEFNLYDEGRCHVI 209 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +G F +RV HSIP+ LV+RS G IVHTGDWK+D++ + G+ D+ Sbjct: 210 SMRQNFQLGPFDCTPIRVTHSIPDCCGLVLRSDHGTIVHTGDWKIDENPVDGESFDRQVF 269 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIR 241 IG EG+ M DSTN + G SE ++ + + + KG V+ T F+S++ R+ Sbjct: 270 DEIGREGVSLFMSDSTNVLSPGRTTSEAVVETALMNRVMGHQGKGRVITTQFASNLHRMA 329 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATG 300 ++ A+ GRKI +G SL + A VG + + + Y +L++I TG Sbjct: 330 AVKKAADASGRKICFIGMSLGFYLEAAARVGRAPFDPKEVIQAANLDQYDPNELLIITTG 389 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 S +P +AL+ +R +KL D ++S + IPGN+ + + NR+ E G + Sbjct: 390 S--QPPAALSLPARNPSHMLKLQSSDFSLYSPKVIPGNDTRVMQMMNRISEMGPEIAMGR 447 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + +H SGH Y +L+ + ++ RPQ + +HGE L AH +LA + I +RNG+ Sbjct: 448 -DENLHTSGHAYKGELEEVLRYARPQHFLPVHGEYAFLCAHAQLARENNINFTSVIRNGQ 506 Query: 421 MLRLFPDPIEII-----------------DEVVHGLFLKD-GFLIGKFADLGIAKRRQLS 462 ML + E F D G +++ + +R+ L+ Sbjct: 507 MLGVADRRNRNTVSMGSAAGIPGASMALLGEAQLTNFYNDGNKGTGTASEMALEERQLLA 566 Query: 463 FVGHLSVNVLLDNH-------YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL 515 G + V + + + A GG + + L + + L Sbjct: 567 VEGIVIAAVDVLRDAAMAASARRLRAKVRVTTR---AMWVAGGGLLEELHRAANDAIERL 623 Query: 516 PQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 P L + ++ ALR K ++P V V ++ Sbjct: 624 PGDAH--LAAVERVVADALRRTCKAFNQRRPEVVVIAHE 660 >gi|162447690|ref|YP_001620822.1| metallo-beta-lactamase family protein [Acholeplasma laidlawii PG-8A] gi|161985797|gb|ABX81446.1| metallo-beta-lactamase family protein [Acholeplasma laidlawii PG-8A] Length = 562 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 126/559 (22%), Positives = 244/559 (43%), Gaps = 17/559 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ F LGG+GE G NM + R++ ++D G+ +P +L GVD + P+ M Sbjct: 3 EIRFFALGGLGENGKNMYVV----DIDRQYFILDAGLKYPTQELYGVDEIIPNYKMFMNI 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCISF 123 + + IF++HAHEDH GAL + L+VP+YA+PF + +++ + ++ + Sbjct: 59 KDRVKGIFLSHAHEDHIGALPHILKELNVPIYATPFTMEVVKDSLKEKNFDLNQLTLNTI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +G I HSIPE++ + + + G IV+T D+ + TD + Sbjct: 119 DQNSIIRIGNVKITFFSTTHSIPESVGIALHTVDGVIVYTSDFTFAQYSDPNYQTDFPKI 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + + ++AL+ +S + + I + NA+G ++V+ FSS + +I+ I Sbjct: 179 NDLAQKNVIALLVESLGSTLIQDGGIHNALTHKINSVYANAEGRIIVSLFSSDLQKIQRI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS----DESFGLYPREQLIVIAT 299 +DI+ +KI ++G +R+V +AI+ G + + L + L+ + T Sbjct: 239 VDISLNHHKKIAIIGRRAQRIVDIAIEKGYLVIPKEALVNLKFIDEKNKNDANNLVCLVT 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G++ EP L ++ R + R + ++E DT++ + +PG E + L + E Sbjct: 299 GNRHEPFYMLQRMCRKQDRLIHISENDTILLMTSPVPGTEKMAARTLDILYRSDANI--E 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--- 416 + + S H ++K M +RP+ ++ GE H K+LALQ Sbjct: 357 VVDKRLLASNHATAEEIKMMINLLRPKYIIPTIGEYRHQYGVKQLALQMNYKEDEIFLLD 416 Query: 417 -RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + L +P +E+ L DG +G D + R L+ G L + ++ Sbjct: 417 NGDAVNLSKGKEPFVSKNEIKTSEILIDGTAVGDVNDFVMRDRELLAADGVLLIIANINA 476 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G P+IV G + + + + + + + + I + Sbjct: 477 KQKQVLGEPKIVSKGFVHLN-ENESMIDEIRAIFDKVTDKHLKGKYINWNEYKLQIRDEV 535 Query: 535 RSLLKKVWGKKPLVTVFIN 553 + + ++P+ I Sbjct: 536 SKYVYQTARRRPITIPVII 554 >gi|294660194|ref|NP_852802.2| hydrolase [Mycoplasma gallisepticum str. R(low)] gi|284811844|gb|AAP56370.2| hydrolase [Mycoplasma gallisepticum str. R(low)] gi|284930263|gb|ADC30202.1| hydrolase [Mycoplasma gallisepticum str. R(high)] Length = 566 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 158/561 (28%), Positives = 266/561 (47%), Gaps = 12/561 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + GG+ E+G NM Y + I++DCG+ F +L G+D + P+ + Sbjct: 11 NKKPTKIFAFGGLEEVGKNMYGIEY----DDELIIVDCGIKFSSVELLGIDGIVPNFAYA 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + + A+ ITH HEDH G + L + VP +YA A L+E K + Sbjct: 67 KANQHKIKALVITHGHEDHIGGIPYLLREVSVPVIYAPLMATKLIEKKLHEHHNLNQYKI 126 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +S+ + F I+ RV HSIP+ + +++P GNIV +GD++ D +A + D Sbjct: 127 VSYNDKSEFSTKHFKIDFYRVCHSIPDAFGVCVQTPNGNIVESGDYRFDFNA-GNEELDI 185 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I GI M ++TNA G SEK I NI +I+KNA G V+++TF+S+V+RI Sbjct: 186 HKVVEISRRGIDLFMTETTNAEIPGFSSSEKEIYDNIKNIIKNANGRVILSTFASNVTRI 245 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 +I+IA Q GRKI LLG S+ VS++ DVG I KD + +P ++++ T Sbjct: 246 SEVIEIAIQHGRKICLLGKSMDNNVSISRDVGYINLKDDDIVESRYVEQHPDNEIMIFCT 305 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG-VRVIA 358 GSQGE +AL L+ G ++L + D++I SS IPGN A+ + N L ++ + + Sbjct: 306 GSQGEELAALNMLASGRHPWIQLKKTDSIIMSSNPIPGNYAAVERLLNELSKEEGISIYE 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H SGH +++ M +RP+ L IHGE + K +A + G + Sbjct: 366 NSPTLKLHASGHATMQEIQLMLSLLRPKYLFPIHGEYKMFTSLKRIAKKCGFDPENVALH 425 Query: 419 GK---MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + + + + + +G + + R+ LS G ++ V++D Sbjct: 426 KNGQIVYLIDRELYYTKETIDAEPLFIEGKSVSPNVKRIMNTRQVLSEEGIFAITVVIDK 485 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I +P++ G G + K+ + + L + + L++ I + Sbjct: 486 ATKQIKTLPKLKSSGCFYLKESHGLMTKIAYEIITNANEYLAKNQNYSEHELKKIIHESC 545 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + + + PLV I +I Sbjct: 546 RFYIWRNKHRNPLVVSNIREI 566 >gi|13508019|ref|NP_109968.1| single stranded RNA(DNA) processing enzyme [Mycoplasma pneumoniae M129] gi|2496315|sp|P75497|RNJ_MYCPN RecName: Full=Ribonuclease J; Short=RNase J gi|1674253|gb|AAB96203.1| single stranded RNA(DNA) processing enzyme-like protein [Mycoplasma pneumoniae M129] gi|301633405|gb|ADK86959.1| putative ribonuclease J 1 [Mycoplasma pneumoniae FH] Length = 569 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 163/557 (29%), Positives = 277/557 (49%), Gaps = 16/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 GG+ E+G NM Y CG+ F DDL G+D + P ++++ + Sbjct: 17 KIFAFGGIQEVGKNMYGIEYDDEIIIID----CGIKFASDDLLGIDGIIPSFEYLIENQA 72 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + VP +YA A L+ K + +K + + Sbjct: 73 KVKALFITHGHEDHIGGVPYLLKQVDVPVIYAPRIAASLILKKVNEHKDAKLNKVVVYDD 132 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + F I+ RVNHSIP+ + +++P GNIV +GD++ D A G++ D + Sbjct: 133 FSNFETKHFKIDFYRVNHSIPDAFGVCVQTPNGNIVESGDFRFDFAA-GGEMLDVHKVVK 191 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 I + MC++TNA G SEK I +NI I+K A+G V++TTF+S+++RI II+ Sbjct: 192 IAERNVHVFMCETTNAEIPGFSQSEKLIYRNINKIIKEARGRVILTTFASNITRINEIIE 251 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD-ESFGLYPREQLIVIATGSQGE 304 IA RK+ LLG S+ V+++ +G++ D + + YP ++++ TGSQGE Sbjct: 252 IAVNNKRKVCLLGKSMDVNVNISRKIGLMDIDSNDIVEVRDIKNYPDRSILILCTGSQGE 311 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL ++RG+ V L DT+I SS IPGN A+ ++ N L + GV + Sbjct: 312 DSAALNTMARGKHNWVSLKSTDTIIMSSNPIPGNYAAVENLLNELSKYGVTIFENSPNMK 371 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKML 422 +H SGH +L+ M + P+ L+ IHGE + K +A + GI V + NG+++ Sbjct: 372 LHASGHATQQELQLMLNLVFPRYLIPIHGEYKMMRTIKNIAQECGINGDDVGLLANGQVM 431 Query: 423 RLFPDPIEIIDEVVHGLF-LKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 L + EV++ + I +R+ LS G +V V+ D + NI G Sbjct: 432 YLIDGKLYYSGEVINADPIYIESRNSSPDLARVIKQRQILSREGMFAVIVVFDKNNNILG 491 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD-----LKLLRESISSALRS 536 +P ++ G + D + + ++ + ++ Q +R + +K L+ + Sbjct: 492 MPTLITRG-CFFALDSSPLMTKITHSIKRGLENVIQNKRFNTREQMIKELKRVCKETVSY 550 Query: 537 LLKKVWGKKPLVTVFIN 553 + K + PL++ ++ Sbjct: 551 FIWKNKSRNPLISTVLS 567 >gi|284931030|gb|ADC30968.1| hydrolase [Mycoplasma gallisepticum str. F] Length = 566 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 157/561 (27%), Positives = 265/561 (47%), Gaps = 12/561 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + GG+ E+G NM Y + I++DCG+ F +L G+D + P+ + Sbjct: 11 NKKPTKIFAFGGLEEVGKNMYGIEY----DDELIIVDCGIKFSSVELLGIDGIVPNFAYA 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 + + A+ ITH HEDH G + L + +P +YA A L+E K + Sbjct: 67 KANQHKIKALVITHGHEDHIGGIPYLLREVSIPVIYAPLMATKLIEKKLHEHHNLNQYKI 126 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +S+ + F I+ RV HSIP+ + +++P GNIV +GD++ D +A + D Sbjct: 127 VSYNDKSQFSTKHFKIDFYRVCHSIPDAFGVCVQTPNGNIVESGDYRFDFNA-GNEELDI 185 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I GI M ++TNA G SEK I NI +I+KNA G V+++TF+S+V+RI Sbjct: 186 HKVVEISRRGIDLFMTETTNAEIPGFSSSEKEIYDNIRNIIKNANGRVILSTFASNVTRI 245 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 +I+IA Q GRKI LLG S+ VS++ DVG I KD + +P ++++ T Sbjct: 246 SEVIEIAIQHGRKICLLGKSMDNNVSISRDVGYINLKDDDIVESRYVEQHPDNEIMIFCT 305 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG-VRVIA 358 GSQGE +AL L+ G ++L + D++I SS IPGN A+ + N L ++ + + Sbjct: 306 GSQGEELAALNMLASGRHPWIQLKKTDSIIMSSNPIPGNYAAVERLLNELSKEEGISIYE 365 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H SGH +++ M +RP+ L IHGE + K +A + G + Sbjct: 366 NSPTLKLHASGHATMQEIQLMLSLLRPKYLFPIHGEYKMFTSLKRIAKKCGFDPENVALH 425 Query: 419 GK---MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + + + + + +G + + R+ LS G ++ V++D Sbjct: 426 KNGQIVYLIDRELYYTKETIDAEPLFIEGKSVSPNVKRIMNTRQVLSEEGIFAITVVIDK 485 Query: 476 -HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I +P++ G G + K+ + L + + L++ I + Sbjct: 486 ATKQIKTLPKLKSSGCFYLKESHGLMTKIAYEIKTNANEYLAKNQNYSEHELKKIIHESC 545 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + + + PLV I +I Sbjct: 546 RFYIWRNKHRNPLVVSNIREI 566 >gi|313471928|ref|ZP_07812420.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 1153] gi|313449029|gb|EFR61303.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 1153] Length = 506 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 137/491 (27%), Positives = 242/491 (49%), Gaps = 9/491 (1%) Query: 71 IFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 + ++H HEDH G + L + +PVYA+PFA+ L++ K + K + Sbjct: 1 MVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKGKLDEHGILKTTELHEEHEDTVL 60 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGN 188 + S+ R HSIP+T+ + + +P+G ++ TGD+K D ++ D + +G+ Sbjct: 61 NFDKLSVTFFRTTHSIPDTLGIAVHTPLGAVIFTGDFKFDLTPVMNQPAPDFQRMAKLGD 120 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 EG+LAL+ DSTNA SE+ + K++ +I+K G ++ TF+S++ R+ + ++ A Sbjct: 121 EGVLALLSDSTNAEVSAFTKSERFVAKSLNNIIKGIDGRIIFATFASNLYRVSTAVEAAI 180 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + GRKI + G S++ + ID+G + L + + +++ TGSQGEP + Sbjct: 181 ETGRKIAIFGRSMENGIQNGIDLGYLNVPKDLIVDANEINRLKPSEAMILCTGSQGEPLA 240 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 AL++++ G R + + DTVIFSS IPGN +++ H+ N+L+E G VI VH Sbjct: 241 ALSRIADGTHRQISIQPGDTVIFSSNPIPGNTLSVNHLINKLMEAGANVIHGKVN-NVHT 299 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLF 425 SGH +LK M + +P+ ++ +HGE V H LA G+ + NG+++ Sbjct: 300 SGHGGQEELKMMVRLAKPKYMIPVHGEYRMQVIHTHLAQDAGVPKENTFVLGNGEVIAFS 359 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPE 484 P+ I + G D ++ + R+ LS G + +D H + P+ Sbjct: 360 PEGSRIAGHIPAGDVFVDTSGTADVGNVVVRDRQILSEEGLVVAVATVDYKHQRVLAGPD 419 Query: 485 IVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFR-RKDLKLLRESISSALRSLLKKVWG 543 I+ G Y + + K V + + R +R++I + L+ L Sbjct: 420 ILSRGF-VYMRESQDLISQAQKNVYHVLRTQMAKKPRPSENDIRKAIIANLQDFLYARTE 478 Query: 544 KKPLVTVFINK 554 ++PLV I + Sbjct: 479 RRPLVLPMIIE 489 >gi|71894553|ref|YP_278661.1| hypothetical protein MS53_0542 [Mycoplasma synoviae 53] gi|71851341|gb|AAZ43950.1| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 629 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 156/561 (27%), Positives = 282/561 (50%), Gaps = 18/561 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 + LGGV EIG + L + +ID G+ F GV + P+ +++ ++ K Sbjct: 5 RIIALGGVEEIGKSTLLVEHL----DHIFIIDAGIKFADTYNTGVKGIIPNYSYLKQKGK 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +FITH HEDH G + L ++ ++A AI L+ K +++KK+ I Sbjct: 61 KIEGLFITHGHEDHIGGVVYLVKETNLNKIFAPRIAIQYLKLKFDEHKITKKVEFIEIHK 120 Query: 126 GDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D ++ HSIP+ + I +P G+I+ TGD++ D I TD L Sbjct: 121 SDVHKFANNCKVDFWTAQHSIPDAFGVRITTPNGSIMCTGDFRFDYTPIGNY-TDFKRLY 179 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IGN+ + AL+ DSTNAMR SEK I +I MK AK ++TTF+S+++R++ II Sbjct: 180 EIGNQKLTALLSDSTNAMRPNHSPSEKDILADISYYMKQAKRKTIITTFASNLTRVKVII 239 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 ++A ++ +K++ G S+ + V V +G I D +F+ + P +++++ TGSQG Sbjct: 240 ELAAKLNKKVITFGRSMIQGVKVGRKLGYINVPDDVFIDKKQLKSIPDNKVVILTTGSQG 299 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E +ALA++S G+ ++K+ + D +IFSS IPGN++ I + NRL + G + + Sbjct: 300 EQLAALARMSYGKHASIKIMKNDLIIFSSSPIPGNKMVIELLINRLYKLGAIIKENGVDG 359 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 +H SGH Y ++ ++++ RP+ + HGE V H + A++ G+ V ++ G + Sbjct: 360 YLHTSGHAYRHEHDKIFKLTRPKYFLPYHGEYRMSVVHGKTAIENGVNPENVIVIQKGIV 419 Query: 422 LRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-I 479 + + I + +V G DG + + + IA+R QL G +++ L++ I Sbjct: 420 YNMLSEKITATNEKVEFGPVYIDGKKVLENSAKVIAERNQLKNSGFVNMVFLINKKTKSI 479 Query: 480 FGVPEIVDIGIPAY---DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 P + G + +I ++ V+ + + P+F+ KDL+ + + + S Sbjct: 480 VARPTFISKGTIVMKNSKDEVEEIKRITHGAVLHYIKNTPEFKEKDLEYI---VKDRIYS 536 Query: 537 LLKKVWGKKPLVTVFINKISR 557 + + P+ + + Sbjct: 537 FFHRKKRRDPVTVIKFFYVDE 557 >gi|294155829|ref|YP_003560213.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma crocodyli MP145] gi|291600365|gb|ADE19861.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma crocodyli MP145] Length = 615 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 152/556 (27%), Positives = 273/556 (49%), Gaps = 15/556 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +PLGGV EIG + L + + ++D G+ F G+ + PD +++ + K Sbjct: 5 RLIPLGGVQEIGKSTLLIEH----NNHIFIVDAGIKFADTFTTGIKGIIPDYSYLNEPGK 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +FITH HEDH G + L + V ++A AI L+ K + +K Sbjct: 61 IIEGLFITHGHEDHIGGVVHLLKQVFVKKIFAPRIAIQYLKLKFEEHGIVQKNHEFIEIE 120 Query: 126 GDKVDV--GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + ++ HSIP+ + I +P G+++ TGD++ D I TD L Sbjct: 121 KSAIYNFDEGCKVDFWTAQHSIPDAFGVRITTPNGSVMCTGDFRFDYTPIGNY-TDFSRL 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G EG+ LM DSTNAMR SEK I +I + AKG +++T F+S+++R++ I Sbjct: 180 DQMGKEGLTVLMSDSTNAMRPFHSPSEKDIITDIERHLVEAKGKIILTAFASNLTRVKVI 239 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQ 302 ID+A ++ +K++ G S+ + V + +G I +F+ + L+++ TGSQ Sbjct: 240 IDLAAKLKKKVITFGRSMIQGVKIGRKLGYIDVSSDIFVDKKHLSKVKDSDLVILTTGSQ 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++S G+ VK+A+ DT+IFSS IPGN + I + NRL + G + + Sbjct: 300 GEQLAALSRMSYGKHATVKIAKGDTIIFSSSPIPGNRMVIELLINRLYKLGAIIKENGPD 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +H SGH Y + +++Q +P+ + HGE + H + A++ G+ V + G Sbjct: 360 GYLHTSGHAYRYEHDKIFQLTKPKYFLPYHGEYRMSIVHGQSAIENGVDAKNVIIPQAGV 419 Query: 421 MLRLFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + + + E +++ +G DG I +R LS G +S+ ++++ N Sbjct: 420 VYNMLDQVVTETNEKINYGPIYIDGNNALNLNANIIRERANLSESGFVSIVLVINKKTNS 479 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVI-TTVVDLPQFRRKDLKLLRESISSALRSL 537 I G P ++ G + + + + + TT+ + ++ L++ IS L++L Sbjct: 480 IIGKPHLISRG-CFFVKNSTALVEETKRISHGTTLHFIKNTPDWNVVDLKQIISDRLKNL 538 Query: 538 LKKVWGKKPLVTVFIN 553 K + P++ I Sbjct: 539 FYKEKRRNPIIIPVIL 554 >gi|209966404|ref|YP_002299319.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] gi|209959870|gb|ACJ00507.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] Length = 495 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 179/446 (40%), Positives = 269/446 (60%), Gaps = 5/446 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E++FLPLGG IGMNM LYG+ KW+++D GV+F DD PG+D V D TFI + Sbjct: 44 DEILFLPLGGCSRIGMNMTLYGHA----GKWLIVDAGVAFLGDDQPGLDAVMADPTFIEE 99 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++ + +THAHEDH GA+ LW L P+YA+ FA ++ + ++++ Sbjct: 100 RMADVVGLVVTHAHEDHVGAIQHLWPRLDCPIYATDFAAHVIRERLKETGTTRQVRLHPL 159 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G ++ +G F ++++ V HSIPE +AL I + G I+HTGDWK DD ++G TD ++L Sbjct: 160 PIGGEIALGPFRVQTIAVTHSIPEPVALAIHTAAGTILHTGDWKFDDSPLVGHTTDVEAL 219 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +G+EG+LA++CDSTN+M EG+ SE + KG + VT F+S+V R++++ Sbjct: 220 RRLGDEGVLAMLCDSTNSMVEGSTASEAKAHAGLTAAFAGRKGTIAVTGFASNVHRMKAV 279 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A+ GR++VL G SL R+ A G ++ FLS + PR +L+++ TGSQG Sbjct: 280 ALAAKANGRRVVLAGRSLLRMEKAARACGYLEDIPEFLSLDQAASLPRRELVLLCTGSQG 339 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+A+++++RGE R+++LA+ DTVIFS+RAIPGNE AI + L GV V+ ++ Sbjct: 340 EERAAMSRIARGEHRSLRLAKGDTVIFSARAIPGNEEAIAAVVRHLETAGVEVLT-PSDA 398 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 PVHVSGHP DLKRMY +RP+ V +HG HL AH LA G+ +G ++R Sbjct: 399 PVHVSGHPAREDLKRMYGLVRPRFAVPVHGTLEHLEAHARLARSCGVERALVPEDGDVIR 458 Query: 424 LFPDPIEIIDEVVHGLFLKDGFLIGK 449 L ++ V DG + Sbjct: 459 LAAKGTAVVGRVDPKRLAHDGRDLLP 484 >gi|323341792|ref|ZP_08082025.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464217|gb|EFY09410.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 552 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 137/557 (24%), Positives = 264/557 (47%), Gaps = 13/557 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ FL LGG+ E G NM++ + + ++D G+ +P+ D GV++V PD++++ K Sbjct: 2 DKIRFLALGGLDEDGKNMSVIEI----NDEIYVVDAGLKYPQTDQLGVEIVIPDLSYLKK 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +K + AIFITH H+D GAL L ++ PVYA+P ++E +V K Sbjct: 58 NKKRVKAIFITHGHDDVMGALPYLVKEVNAPVYATPLIALMIEDLFKENKV-KNAHIHKI 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD-AILGDVTDKDS 182 + + +G + + HSIP+T + I + G +VH+ ++ +D D G + D + Sbjct: 117 KRNSRFKIGERRFVAFGLTHSIPDTFGIAIDTDQGYVVHSSEFIIDFDVRNQGFMCDVAN 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G +G+ L +S + R+G I K I + + +LVT + ++ R+ Sbjct: 177 ISELGKKGVFLLTAESVASKRQGFTSPNHRITKRIERVFEETNERILVTLYEQNIYRLIE 236 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +I+ A++ RK+ G +R++ + + + ++VI + Sbjct: 237 VIETAQKFKRKVFFYGEKQRRLMKHLERLNYYHMPKGLEIKPEQFNNDIKDVVVIVSDIG 296 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + + +++ GE + V++ E D VI +S +PG E G + N L + GV+V++ Sbjct: 297 PSVFNKMGRIAMGEDQLVEVNENDHVIVASPVVPGTEAVAGAMINELYKDGVKVMS--LN 354 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 + H DLK M ++P+ V + GE +LVA+ +A+ GI+ + + NG+ Sbjct: 355 YKDVMPMHASVEDLKMMIALLKPKYYVPVKGEYQNLVANASVAVDMGISAGNIVILDNGQ 414 Query: 421 MLRLFPDPIEIIDEV-VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + ++ E+ L DG + L + R+ L+ G + V ++++N Sbjct: 415 VAEFDEGRLKATSEILKLEDMLIDGKDHLDTSGLVLRDRQTLATDGSIIVGMVINNKTKE 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I G P++ G+ Y D I K + + T++ L + + D R + + Sbjct: 475 ILGGPDVQSRGV-IYLKDADNIMKEVGVILEQTILKLVEKHKYDNVTARNEARDVIAKYI 533 Query: 539 KKVWGKKPLVTVFINKI 555 K GK+P++ I +I Sbjct: 534 YKQTGKRPMILPVIIEI 550 >gi|293363663|ref|ZP_06610413.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] gi|292552770|gb|EFF41530.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] Length = 616 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 150/555 (27%), Positives = 273/555 (49%), Gaps = 13/555 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +PLGGV EIG + L + + ++D G+ F G+ + PD +++ + K Sbjct: 5 RLIPLGGVQEIGKSTLLVEH----NNHIFILDAGIKFADTYTTGIKGIIPDYSYLNQPGK 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +FITH HEDH G + L ++V ++A AI L+ K +++K Sbjct: 61 IVEGLFITHGHEDHIGGVVHLVKQVNVKKIFAPRIAIQYLQLKFDEHGINQKDIKFIEIE 120 Query: 126 GDKVDV--GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V ++ HSIP+ + + +P G+++ TGD++ D I TD L Sbjct: 121 KSAVYKFPEGCVVDFWTAQHSIPDAFGIRLTTPNGSLMCTGDFRFDYTPIGNY-TDFSRL 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG EG+ L+ DSTNAMR SEK I +I AKG ++VT F+S+++R++ I Sbjct: 180 DQIGKEGLTVLLSDSTNAMRPFHSPSEKDILTDIEKHFLEAKGKIIVTAFASNLTRVKVI 239 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL-FLSDESFGLYPREQLIVIATGSQ 302 ID+A ++ +K++ G S+ + V + +G I F+ + +L+++ TGSQ Sbjct: 240 IDLAARLNKKVITFGRSMIQGVKIGRKLGYIDVPSTVFVDKKHLSSIKDNELVILTTGSQ 299 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL+++S G+ +VK+ + DT+IFSS IPGN + I + NRL + G + + Sbjct: 300 GEQLAALSRMSYGKHASVKIVKGDTIIFSSSPIPGNRMVIELLINRLYKLGAIIKENGPD 359 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 +H SGH Y ++ +++Q +P+ + HGE + H + A++ G+ + + G Sbjct: 360 GYLHTSGHAYKHEHAKIFQLTKPKFFLPYHGEYRMCIVHGQSAVENGVDPKNIIIPQAGV 419 Query: 421 MLRLFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 + + + E + + +G DG I +R LS G +SV ++++ N Sbjct: 420 VYNMLNKEVSETTERINYGPIYIDGNNALNLNANIIKERSNLSQSGFVSVVLVINKKTNT 479 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I G P ++ G + + + TT+ + + ++ L++ ++ L++L Sbjct: 480 IIGKPHLISRGCFFVKTAQSLVEETKRISHGTTLHYIKNTKDWNVVDLKQLLTERLKNLF 539 Query: 539 KKVWGKKPLVTVFIN 553 K + P++ I Sbjct: 540 YKEKRRDPVIVPVIL 554 >gi|313901149|ref|ZP_07834637.1| conserved hypothetical protein [Clostridium sp. HGF2] gi|312954107|gb|EFR35787.1| conserved hypothetical protein [Clostridium sp. HGF2] Length = 552 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 129/558 (23%), Positives = 252/558 (45%), Gaps = 13/558 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ LGG+ E G NM + + +I+ G+ +P+ D GV+ + PD +++++ Sbjct: 2 DQVRIFALGGLDENGKNMYVVE----VNEAIFIIEAGLKYPESDQLGVEFIIPDFSYLIQ 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IFITHAH+D AL L ++VPVY ++ E + K + Sbjct: 58 NKDRIKGIFITHAHDDVVAALPYLLKQINVPVYTGNLTANIIHDMLKKEGI-KNVKIHRM 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDS 182 + K +G + + + H+ P+ L I + G IV+TG++ +D D + + D + Sbjct: 117 KRASKQTIGGVKVRTFPMTHAFPDNFGLAIATDQGYIVYTGEFIIDYDMLQQEYLCDLNE 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG G+L L+ +S +A R G + I I I + + +L++++S S+ RI Sbjct: 177 LSDIGKRGVLCLLSESQSADRIGHTAPKHRITNLIEPIFEASHSRILISSYSQSLFRIIE 236 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II++A++ RKI ++ ++ V + E E ++V+ TG+ Sbjct: 237 IIELAKKYNRKIFFHDKGMRELLHQLELVKYYHVPREMEVKEKDFKDDMEDVVVLITGNG 296 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 ++ ++ E + V + DT+I +S + G E+ ++N + ++G R+ + Sbjct: 297 KNLFRTMSNIANHEDKFVSFRKTDTIIVASPIVSGTELDANSMENEIYKEGGRIFT--LD 354 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGK 420 +S HP DLK M +P+ + + GE HL + LA + G + + + NG+ Sbjct: 355 SKTVLSMHPSSEDLKMMLYLFQPKYYIPVKGEYRHLFVNANLASKMGYSPDRILILENGQ 414 Query: 421 MLRLFPDPIEII-DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 + + ++ + + + L DG + + R LS G + + V + Sbjct: 415 VAQFEEKILKSVAEHLELEDTLIDGKENWDVTGVVLKDREVLSTDGVMIIGVGVSHKTKE 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 + P++ G+ Y D I K + + + + +R D +R + L Sbjct: 475 VINGPDVQTRGL-IYLKDADYIIKEVGNIMEKCIETAVKEKRYDNLTVRGEAREKISKYL 533 Query: 539 KKVWGKKPLVTVFINKIS 556 K GK+P+V I +I+ Sbjct: 534 SKETGKRPMVLPVILEIN 551 >gi|303275824|ref|XP_003057206.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461558|gb|EEH58851.1| predicted protein [Micromonas pusilla CCMP1545] Length = 813 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 169/602 (28%), Positives = 278/602 (46%), Gaps = 63/602 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FLPLGG+GEIGMN AL G + +++++D G+ FP + G+ V PD++F+ + + Sbjct: 148 IKFLPLGGLGEIGMNCALVG----TENRYVLLDAGLMFPDHEELGIQKVLPDVSFLSRWK 203 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKK---IPC 120 + A+ ITH HEDH GAL + L PVYA F + L+ + + Sbjct: 204 DKIEAVLITHGHEDHIGALPWVIPALDPSTPVYAGLFTMQLIARRMKEFNLWGDGSRFKV 263 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G + G F +E+VRV HSIP+ L+ R G IVHTGDWK+D++ + G D+ Sbjct: 264 IGVGDGSRFSAGPFEMEAVRVTHSIPDCCGLIFRCAAGTIVHTGDWKIDENPVDGLNFDR 323 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + +G EG+ +M DSTN + G ISE I+ + KG ++ T F+S++ R+ Sbjct: 324 SAWERVGQEGVTLMMSDSTNVLSPGRTISESKIRDAMVARAHGHKGRIITTQFASNIHRL 383 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 + +A+ RKI +G SL + A GI + + E G LIV+ T Sbjct: 384 YGVKALADATDRKIAFVGMSLTTYLEAAKKAGIAPIDPETLIPAEEIGNVNPSDLIVVTT 443 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQ EPR+ L Q + G R + L E D V++S++ IPGNE + + N + +G + Sbjct: 444 GSQAEPRAQLCQAAFGGSRLLTLTEDDLVLYSAKMIPGNEKRVMRMMNAIAVRGPEIAMR 503 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + +H SGH Y ++L+ + + + P+ + +HGE L H+ LA + G+ + NG Sbjct: 504 REDG-LHSSGHAYRDELEEVLKMLHPEHFLPVHGEYAFLKEHEALARECGVRHSAVIGNG 562 Query: 420 KMLRLFP----------DPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLS 468 +ML + P + ++ E DG G DL I +R +++ G + Sbjct: 563 QMLGVTPLRNAQSHGTMGNLHLLGEARLQTMFNDGGKGSGTSEDLAIEERMRIATEGIVV 622 Query: 469 VNVLL------------------------------------DNHYNIFGVPEIVDIGIPA 492 V++ + D + + + Sbjct: 623 VDLEVFDGELREGASIKEDPEDGDVGGDAADGGGEEKEESYDAGGFMTARARVTSR---S 679 Query: 493 YDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFI 552 D G++ L +V L R L + + +SA+R + K+P + V Sbjct: 680 MWTDEGRLLATLRNAAERSVEGLESGAR--LSAVERTCASAVRFACRNYCNKRPDIIVVA 737 Query: 553 NK 554 ++ Sbjct: 738 HR 739 >gi|169350552|ref|ZP_02867490.1| hypothetical protein CLOSPI_01320 [Clostridium spiroforme DSM 1552] gi|169292872|gb|EDS75005.1| hypothetical protein CLOSPI_01320 [Clostridium spiroforme DSM 1552] Length = 568 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 131/571 (22%), Positives = 252/571 (44%), Gaps = 23/571 (4%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+ + + LPLGG E+G +M K ++D G FP+ + G+D++ P + Sbjct: 5 MRKDIVKILPLGGQAEMGKSMYCIEI----KDKIFILDAGFRFPEINKLGIDIIIPSFDY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + ++AI ITH H+D GAL L ++ P+YA L++ + Sbjct: 61 LKENASRVVAIIITHGHDDVMGALPYLLEAVNAPIYAPALTADLIDQMLKRHKKHNNFKI 120 Query: 121 ISF----QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + D +++ +E V HSIP ++ + + + G IV+ G++ +D A G Sbjct: 121 NYQLNRVKRNDSIEIEGVPVEFFPVTHSIPGSVGVALWTRDGYIVYCGEFIIDFGAPEGF 180 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D + IG +G+LAL+C+S+ + G + + I +I ++++G +++++++ + Sbjct: 181 RCDIQKMMEIGKKGVLALLCESSYSKNSGYTSPKHKLTDKIDNIFEDSEGRIIISSYAQN 240 Query: 237 VSRIRSIIDIAEQIGRKIVLLGS----SLKRVVSVAIDVGI----IKKDQLFLSDESFGL 288 + R + I+++ ++ RKIV G S +V + + I K+ + S + Sbjct: 241 IFRTKEIVELTKKYNRKIVFYGRDKYDSTNSIVRIGQRLKKAVINIPKEIIAFSTDIGKK 300 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + L+V+ +G+ + + G +KL E DT I +S +PG E N Sbjct: 301 GIDDDLVVLLSGTPQRIYHDINDIIDGGDEYLKLNENDTFIVASPVVPGTEKIANRAINE 360 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 L + + + S H D+K + Q P + I GE H +++ E+A+ Sbjct: 361 LYKTDSNI--HVLKNKELTSMHASQEDVKVIIQIFNPTYFIPIKGEYQHFISNMEVAMSM 418 Query: 409 GI--ACVPPVRNGKMLRLFPDPIE-IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG 465 + +P + NG++L +E D + + DG +G D I R QLS G Sbjct: 419 QVLQENIPIIDNGEILTFKNGVLEDYRDTIEVEDVMIDGIGVGDVGDKVIDDRIQLSNDG 478 Query: 466 HLSVNVLLDNHY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK 524 + + V +D+ I ++ G Y D I K ++ V + + Sbjct: 479 VVVIGVTIDSKKREIIANTDVQSRGF-VYLKDSEHIIKGVIDIAEKCVAQMKGDYTLEAI 537 Query: 525 LLRESISSALRSLLKKVWGKKPLVTVFINKI 555 +R+ I + K GK+P++ I ++ Sbjct: 538 EVRQEIKDKASKYIAKETGKRPVILPIIIEV 568 >gi|26553981|ref|NP_757915.1| hypothetical protein MYPE5290 [Mycoplasma penetrans HF-2] gi|26453989|dbj|BAC44319.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 629 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 156/564 (27%), Positives = 280/564 (49%), Gaps = 14/564 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + +GG+ E+G N + + + IM+D G+ F DL G++ + + ++ Sbjct: 72 KPDHTYVFAVGGLDEVGKNSYAIEH----NEETIMVDYGIKFASSDLLGINGIVANTSYF 127 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYER-VSKKIP 119 ++ + + A+ +TH HEDH G + L V +YA A L++ + R + Sbjct: 128 VENNRPIDALLLTHGHEDHIGGIPYLLQTTEVKKIYAPLLATELIKRRLSEFRDIKYNPE 187 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I F KV F ++ RV HSIP++ + I++P G IV GD++ D D T+ Sbjct: 188 IIPFGDDSKVSTKYFEVDFFRVCHSIPDSFGMCIKTPNGRIVSAGDYRYDF-GKDTDDTN 246 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L + N GI + +STN+ + G SE I NI ++KN+KG V V TF+S++ R Sbjct: 247 IHKLVEMSNRGIDIFLSESTNSDQPGFSPSEDNIINNIETLIKNSKGRVFVATFASNLGR 306 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK-DQLFLSDESFGLYPREQLIVIA 298 I II+ A + GR++ ++G S++ + + +G +K + FL+ + +++V+ Sbjct: 307 IEKIIERAIKSGRRVCIMGRSMEANIKTSKKLGYLKISESDFLTTKELNECKDREILVVL 366 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TGSQGE +AL Q++ G+ + L D++I SS IPGN ++ + NRL +QGV + Sbjct: 367 TGSQGEEMAALNQMALGKHPRLSLKPSDSIIMSSNPIPGNFKSVELLINRLYKQGVNMYT 426 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPV 416 +H SGH +L+ M++ ++P+ L+ IHGE L A K A GI V + Sbjct: 427 NSPNFRIHSSGHATIQELQMMFKILKPKYLIPIHGESKMLSAMKRNANSIGINPENVFVL 486 Query: 417 RNGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 NG + L +++ ++ + D + K I KR+ LS G ++ VL+D Sbjct: 487 TNGLKVELKDHNLKLTNQRIDACPIYIDKKVASKSTTDLINKRKLLSEEGIFNIIVLIDH 546 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRESISSA 533 + + P + G Y D + + +V + L + + +++++++ Sbjct: 547 KNKKVVKNPMLSTRG-CFYAKDSSSLITKISFSVKDEIESLLNKEAEASKEKIKQAVANV 605 Query: 534 LRSLLKKVWGKKPLVTVFINKISR 557 ++ + K K P+VT + I++ Sbjct: 606 VKFYVWKNKKKNPIVTTTVFDINK 629 >gi|229544381|ref|ZP_04433440.1| RNA-metabolising metallo-beta-lactamase [Bacillus coagulans 36D1] gi|229325520|gb|EEN91196.1| RNA-metabolising metallo-beta-lactamase [Bacillus coagulans 36D1] Length = 484 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 143/487 (29%), Positives = 236/487 (48%), Gaps = 8/487 (1%) Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH HED GAL + L+VPVYA+ F + L + K +V K I A + A Sbjct: 1 THGHEDAIGALPYILMKLNVPVYATKFTVALAKEKLKELKVKKHIRFTEINADTVLHFDA 60 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 I + HSIP+++ + I + GNIV+TGD+K D + ++ + IG EG+L Sbjct: 61 CDIHFFKTTHSIPDSVGICISTSEGNIVYTGDFKFDQELGGHYRSEIGKMSKIGEEGVLL 120 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 L+ DST A G E + + I D +AKG +++ +F+S++ R++ ++D A GRK Sbjct: 121 LLSDSTEAEHPGYTTHESVVAEEITDAFYDAKGRIIIASFASNLIRVQQVLDAASATGRK 180 Query: 254 IVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 + +G+ L+++ +A+ +G ++ + L + + Y E+L ++ TGSQGEP L + Sbjct: 181 VAFVGNYLEKIYKIALKLGYLQARTEDLIIPLQQISKYRDEELAILTTGSQGEPFLVLQK 240 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 +++ + V + + DTVI ++ PG E+ + + L G V A + +HV+GH Sbjct: 241 MAKKNHKQVNIQKGDTVILATTPSPGLELFMAKTIDLLYRAGADVYAG--DRKIHVTGHG 298 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPI 429 DLK M +RP+ V I GE L AH +LA + V NG++L Sbjct: 299 CQEDLKLMLDLMRPKYFVPIQGEYRSLYAHAKLAYKTGMPKESVIISSNGEVLEYKHGKF 358 Query: 430 EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDI 488 + V G L DG +G ++ + R+ LS G L V V LD + PEI+ Sbjct: 359 QASSRVASGNILIDGIGVGDVGNIVLRDRKLLSQDGILVVVVTLDKKLKKLAAGPEIISR 418 Query: 489 GIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLV 548 G Y + K+ V V D +++ I L S L + ++P++ Sbjct: 419 GF-VYVRESEKLISHSSNIVKEVVEQNTSQEAFDWTSIKQGIRDHLSSFLYEQTKRRPMI 477 Query: 549 TVFINKI 555 I ++ Sbjct: 478 LPIIMEV 484 >gi|293400768|ref|ZP_06644913.1| putative metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305794|gb|EFE47038.1| putative metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 553 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 127/559 (22%), Positives = 251/559 (44%), Gaps = 14/559 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ LGG+ E G NM + + +I+ G+ +P GV+ + PD +++++ Sbjct: 2 DQVRIFALGGLDEDGKNMLVVE----VNEAIFIIEAGLKYPDTGQLGVEFIIPDFSYLIE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ + IFITHAH+D AL L ++ PVY ++ E + K Sbjct: 58 NKERIQGIFITHAHDDVVAALPYLLKQVNAPVYTGALTANIIHEMLKKEGI-KNAKIHRL 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV-TDKDS 182 + K +G I + + H+ P+ L I + G IV+TG++ +D D + + D + Sbjct: 117 KRCSKQTIGGVKIRTFPMTHAFPDNFGLAISTDQGYIVYTGEFIVDYDMLQKEYLCDLNE 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIR 241 L IG +G+L L+C+S A + G + I I I + ++G +L++ +S S+ RI Sbjct: 177 LSDIGKKGVLCLLCESQGADKSGHTAPKHRITSLIEPIFEASEGTRILISCYSQSLFRII 236 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 II++A++ RKI ++ ++ + + + +E E ++V+ +G+ Sbjct: 237 EIIELAKKFNRKIFFHDKGIRELLKHLETMKYYRVPKEMEINEKNFSDDMEDVVVLISGN 296 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 + ++ E +V DT+I +S + G E+ +++N + ++G ++ Sbjct: 297 GKNLFRTMTNIANHEDAHVSFRTSDTIIVASPIVSGTELDASNMENEIYKEGGKIYT--L 354 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNG 419 + +S HP DLK M +P+ + I GE HL + LA + G + + + NG Sbjct: 355 DSKTVLSMHPSSEDLKMMLYLFQPKYYIPIKGEYRHLYVNANLATKMGYSPDRILILENG 414 Query: 420 KMLRLFPDPIEII-DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 ++ ++ + + + DG + + R LS G + + V ++ Sbjct: 415 QIALFENKILKSVAQRLELEDTMIDGKENWDVTGVVLKDREVLSTDGVMIIGVGVNHKTK 474 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P++ G+ Y D I K + + + + +R D +R + Sbjct: 475 EISNGPDVQTRGL-IYLKDAEYIIKEVGNIMENCIEKAVKEKRYDNLTVRAEARDKISKY 533 Query: 538 LKKVWGKKPLVTVFINKIS 556 L K GK+P+V I +I+ Sbjct: 534 LMKETGKRPMVLPVIMEIN 552 >gi|12044991|ref|NP_072801.1| metallo-beta-lactamase superfamily protein [Mycoplasma genitalium G37] gi|255660158|ref|ZP_05405567.1| metallo-beta-lactamase superfamily protein [Mycoplasma genitalium G37] gi|1723112|sp|P47385|RNJ_MYCGE RecName: Full=Ribonuclease J; Short=RNase J gi|3844731|gb|AAC71357.1| metallo-beta-lactamase superfamily protein [Mycoplasma genitalium G37] gi|166078955|gb|ABY79573.1| metallo-beta-lactamase superfamily protein [synthetic Mycoplasma genitalium JCVI-1.0] Length = 569 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 162/557 (29%), Positives = 278/557 (49%), Gaps = 16/557 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 GG+ E+G NM Y CG+ F DDL G++ + P +++ + Sbjct: 17 KIYAFGGIQEVGKNMYGIEYDDEIIIID----CGIKFASDDLLGINGIIPSFEHLIENQS 72 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+FITH HEDH G + L + +P +YA A L+ K + +K ++F Sbjct: 73 KVKALFITHGHEDHIGGVPYLLKQVDIPVIYAPRIAASLILKKVNEHKDAKLNKIVTFDD 132 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + F I+ RVNHSIP+ + +++P GNIV +GD++ D A ++ D + Sbjct: 133 FSEFQTKHFKIDFYRVNHSIPDAFGICVQTPNGNIVQSGDYRFDFAA-GSEMLDVHKVVK 191 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 I + M +STNA G SEK I +NI I+K A+G V++TTF+S+++RI II+ Sbjct: 192 IAERNVHVFMSESTNAEVPGFSQSEKLIYRNIQKILKEARGRVILTTFASNITRINEIIE 251 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD-ESFGLYPREQLIVIATGSQGE 304 IA RKI LLG S+ V+++ +G++ D + + YP ++++ TGSQGE Sbjct: 252 IALNNKRKICLLGKSMDVNVNISRKIGLMAIDSNDIVEVRDIKNYPDRNILILCTGSQGE 311 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL ++RG+ V L DT+I SS IPGN A+ ++ N L + GV + ++ Sbjct: 312 EAAALNTMARGKHNWVSLKSTDTIIMSSNPIPGNYAAVENLLNELSKFGVAIYENSSQLK 371 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKML 422 +H SGH +L+ M + P+ L+ IHGE + K +A + GI V + NG+++ Sbjct: 372 LHASGHATQQELQLMLNLMFPKYLIPIHGEFKMMRTIKNIANECGIKSEDVALLSNGQVM 431 Query: 423 RLFPDPIEIIDEVVHGLF-LKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 L + + +E+++ + I +R+ LS G +V V+ D + NI G Sbjct: 432 YLIDEELYYSNEIINADPIYIESHNSSPDLARIIKQRQILSRDGMFAVIVVFDKNNNIIG 491 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD-----LKLLRESISSALRS 536 +P ++ G + D + + +V T+ + Q ++ + K L+ + Sbjct: 492 IPTLITRG-CFFALDSNPLMTKIAHSVKRTLESVIQSKKFNSHEQLTKELKRVCKETVSY 550 Query: 537 LLKKVWGKKPLVTVFIN 553 + K + PL++ ++ Sbjct: 551 FIWKNKNRNPLISTVLS 567 >gi|291278823|ref|YP_003495658.1| hypothetical protein DEFDS_0408 [Deferribacter desulfuricans SSM1] gi|290753525|dbj|BAI79902.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 528 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 165/548 (30%), Positives = 267/548 (48%), Gaps = 31/548 (5%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ GG GEIGMNM LY S ++DCGV F + PG+D++ PD ++ Sbjct: 4 KISIF--GGAGEIGMNMYLYE----SESVAFLVDCGVKFADNSYPGIDMIIPDWDYLKSI 57 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + L AI +TH HEDH G + L + VY I LLE K ++ K+ + Sbjct: 58 KDKLRAIILTHGHEDHIGGVPYLLEDFDLEVYGGNLTIKLLEYKFYERKI--KVLTNVVK 115 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D ++VG F IE V V HSI +T L I + ++H D+K+D + G D Sbjct: 116 DKDVINVGDFQIEFVSVTHSIQDTFGLFITNNDLKLLHISDYKMDQAPVNGKPFDVHRFM 175 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 IG +G+ AL+ DSTN + +G SE I ++ D+ A G V TTFSS++ RI+ ++ Sbjct: 176 EIGKKGVTALLSDSTNVVNDGLTPSESSIYNDLLDVFLQANGRVFFTTFSSNLDRIKQVV 235 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 +I EQIGRKIV+ GSS+ + V + ++G++ K +S + +++ I +G QG Sbjct: 236 EICEQIGRKIVVDGSSVTKSVKIGRELGLLNIKQDTLISLQEAKKLDDDKVCFIISGCQG 295 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E S L +++ E + +K E D I S+R IPGNE+ + + N+L G +V+ + E Sbjct: 296 EVNSTLYKIASNERKMLKAKEGDLFIISARVIPGNELNLNNTINKLYYYGAKVV-DIEEK 354 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP---VRNGK 420 +HVSGH + K M +IRP+ L+ IHGE HL H EL + +G+ Sbjct: 355 KIHVSGHASKEEAKLMLNFIRPKYLIPIHGEYRHLKTHIELLKEVNYDVETEGIFAEDGE 414 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 +L + + D D + + ++ L+ G + ++ + F Sbjct: 415 ILVFEGEKLVGQDNFESKRKYIDARGEFVLTEEDLKLKKNLARDGIV----IIQDFGKEF 470 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + +G D ++ + + + VVDL + E + + +R KK Sbjct: 471 S---LETVGFTLNKEDENRLRYFIDENM--GVVDLSRD---------ELLVNIVRRFFKK 516 Query: 541 VWGKKPLV 548 + K+P+V Sbjct: 517 RFDKRPVV 524 >gi|186701651|ref|ZP_02971353.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186700893|gb|EDU19175.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 596 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 152/562 (27%), Positives = 265/562 (47%), Gaps = 15/562 (2%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M+N + LGG+ EIG N + + + I+ID G+ F LPG D + Sbjct: 1 MENNKKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVAN 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSK 116 +++K + ++ +TH HEDH G + + + + +YA A L+E + + K Sbjct: 57 FDYLIKNNHKIHSLVVTHGHEDHIGGIPHILRHVKIKTIYAPTLAAKLIERRLSEYKDIK 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + Sbjct: 117 PPRIIVFEDESMYKTKYFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 T+ + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S+ Sbjct: 177 -TNLAKISQISNRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASN 235 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + R+ II IA + +KI ++G S++ + + +G + + F++ + Y +++ Sbjct: 236 LGRVEEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIV 295 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 VI TGSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ Sbjct: 296 VILTGSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLT 355 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACV 413 V +H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 356 VYENSPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHV 415 Query: 414 PPVRNGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 NG+ L+L + + V +G+ I +++R LS G L++ + Sbjct: 416 IIAPNGQKLQLLDGVLSHTNIYVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLN 475 Query: 473 LD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D + I G + + + + +++ + + D K L+E +S Sbjct: 476 ADFKKAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEEALAKKEFDEKKLKEIVS 534 Query: 532 SALRSLLKKVWGKKPLVTVFIN 553 ++S++ K K P++ V I Sbjct: 535 GNVKSIVWKWRKKNPIINVTII 556 >gi|13358135|ref|NP_078409.1| hypothetical protein UU570 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762027|ref|YP_001752655.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920343|ref|ZP_02931681.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508524|ref|ZP_02958048.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|11278692|pir||G82874 conserved hypothetical UU570 [imported] - Ureaplasma urealyticum gi|6899578|gb|AAF30984.1|AE002155_6 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827604|gb|ACA32866.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902767|gb|EDT49056.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675961|gb|EDT87866.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 596 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 151/558 (27%), Positives = 262/558 (46%), Gaps = 12/558 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K LGG+ EIG N + + + I+ID G+ F LPG D + ++ Sbjct: 5 KKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVANFDYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + ++ +TH HEDH G + + + + +YA A L+E + + K Sbjct: 61 IKNNHKIHSLVVTHGHEDHIGGIPHILRHVKIKTIYAPTLAAKLIERRLSEYKDIKPPRI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + T+ Sbjct: 121 IVFEDESMYKTKYFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE-TNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S++ R+ Sbjct: 180 AKISQISNRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II IA + +KI ++G S++ + + +G + + F++ + Y +++VI T Sbjct: 240 EEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ V Sbjct: 300 GSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYEN 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 360 SPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIAP 419 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ L+L + + V +G+ I +++R LS G L++ + D Sbjct: 420 NGQKLQLLDGVLSHTNIYVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFK 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G + + + + +++ + + D K L+E +S ++ Sbjct: 480 KAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEEALAKKEFDEKKLKEIVSGNVK 538 Query: 536 SLLKKVWGKKPLVTVFIN 553 S++ K K P++ V I Sbjct: 539 SIVWKWRKKNPIINVTII 556 >gi|160915263|ref|ZP_02077476.1| hypothetical protein EUBDOL_01271 [Eubacterium dolichum DSM 3991] gi|158433062|gb|EDP11351.1| hypothetical protein EUBDOL_01271 [Eubacterium dolichum DSM 3991] Length = 552 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 127/558 (22%), Positives = 245/558 (43%), Gaps = 13/558 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ LGG+ E G NM + + +++ G+ FP+ D GV+ + PD +++ Sbjct: 2 DQVRIFALGGLDENGKNMTVLEI----NDVIFVVEAGMKFPESDQLGVEFIIPDFQYLID 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IFITHAH+D AL L + PVY ++ + E + K+ Sbjct: 58 NKDRIGGIFITHAHDDVAAALPYLLKQIDAPVYTGNLTANIIHERLKKEGI-KRSKIHRL 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVTDKDS 182 + + + + + + HS P+ + S G IV+TG++ +D D + + D + Sbjct: 117 KRVSRQKINGIEVRTFPMTHSFPDNFGIAFGSSQGYIVYTGEYIVDYDMLKDEYLCDLNE 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG +G+L LM +S R+G I I + + + ++V+ ++ S+ R+ Sbjct: 177 LSEIGKKGVLCLMSESQAVERDGHSAPNHRITNLIEPVFERSNSRIIVSCYTDSLFRVME 236 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 IID+A++ RKI L+ ++ V + + + E ++V+ +GS Sbjct: 237 IIDLAKKHQRKIYFHDKDLRDLLKHLEQVKYYQVPKEMELTDKTFHNDMEDVMVVISGSG 296 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 L+ ++ E + D +I +S + G E+ +++N + +G ++I + Sbjct: 297 KNLFRKLSNIANKEDAKISFRTSDNIIIASPVVSGTELDYNNMENNIYREGGKLIT--LD 354 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP-VRNGKM 421 +S HP DLK M RP+ + + GE HL + LA++ G V + Sbjct: 355 SKKALSMHPSSEDLKMMMYLFRPKYYIPVKGEYRHLYMNANLAMKVGYGADRILVLDNGQ 414 Query: 422 LRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 + +F + I + + + L DG + + R LS G + V V ++ + Sbjct: 415 VAVFENKILTSVSERIELEDTLIDGKENWDVTGVVLKDREVLSTDGVMIVGVGVNFKNKE 474 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I P++ G+ Y D I K + + ++ + +R D +R + L Sbjct: 475 IINGPDVQTRGL-IYLKDADYIIKEVGNMMEECIIAAVKEKRYDNLAVRAEARDKITKYL 533 Query: 539 KKVWGKKPLVTVFINKIS 556 K GK+P+V I +I+ Sbjct: 534 MKETGKRPMVLPVILEIN 551 >gi|288962998|ref|YP_003453292.1| metallo-beta-lactamase [Azospirillum sp. B510] gi|288915264|dbj|BAI76748.1| metallo-beta-lactamase [Azospirillum sp. B510] Length = 494 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 179/446 (40%), Positives = 267/446 (59%), Gaps = 5/446 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E++FLPLGG IGMNMALYG+ KW+++D GV+F D++PG+D + D TFI Sbjct: 38 KDEILFLPLGGCSRIGMNMALYGHA----GKWLIVDAGVAFVGDEMPGIDSLMADPTFIE 93 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++++ + +THAHEDH GA+H LW L P++ASPFA ++ + + + + Sbjct: 94 ERMQDVVGLVVTHAHEDHIGAIHHLWPRLRCPIHASPFASHIIRERLKEKGAHRAAKVQT 153 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 F+ GD + +G F IE++ V HSIPE M+L IR+ G ++HTGDWK D D ++G TD + Sbjct: 154 FEIGDTLTIGPFRIETIAVTHSIPEPMSLAIRTAAGTVLHTGDWKFDPDPLIGRTTDFRA 213 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L +G+EG+LA+MCDSTNA G+ SE + + G + VT F+S+V+R+ + Sbjct: 214 LKRLGDEGLLAMMCDSTNADVPGSTGSEADARAGLMAAFAGRSGAIAVTGFASNVARMTA 273 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + + A +GRK+VL+G S+ R+ A G + F+ PRE L+ + TGSQ Sbjct: 274 VAEAAAAVGRKVVLVGRSMLRMEKAAQACGYLDHVPEFMDVREASWTPRENLVFLCTGSQ 333 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE R+AL++L+R E R++ L E DTVIFS+R IPGNE A+ I L GV ++ A+ Sbjct: 334 GEERAALSRLARNEHRDLWLEEGDTVIFSARTIPGNEEALAEIHEHLRGMGVEIVT-PAD 392 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 PVHVSGHP +DL RMY +RP+ V +HG H+ AH LA G+ +G +L Sbjct: 393 APVHVSGHPKRDDLARMYGLVRPRFAVPVHGTIEHMEAHARLARSCGVERALVPEDGDIL 452 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIG 448 R+ + +I + G + Sbjct: 453 RIAKEGTRVIAHIEPKRLANTGRELI 478 >gi|149002293|ref|ZP_01827235.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] gi|147759608|gb|EDK66599.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] Length = 503 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 136/508 (26%), Positives = 235/508 (46%), Gaps = 14/508 (2%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + LGGV E G NM + G +++ G+ +P+++ GVD+V P++ + Sbjct: 1 MSN--ISLTTLGGVRENGKNMYIAEIG----ESIFVLNVGLKYPENEQLGVDVVIPNMDY 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 + + + +F+TH H D GAL L + VPV+ S I L + KK Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFND 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++D G + +S+PE++ +V+++ G+IV+TGD+K D A TD Sbjct: 115 FHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L IG +G+LAL+ DS NA SE ++ I + + +G ++V SS++SR Sbjct: 175 FARLAEIGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSR 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK--KDQLFLSDESFGLYPREQLIVI 297 I+ I D A++ GR+IVL G ++ +V AI + + + L + + + +LI++ Sbjct: 235 IQQIFDAADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIIL 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG GEP + L ++S G R V++ + D V ++ E + ++N + + G V Sbjct: 295 ETGRMGEPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVK 354 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 +HVSGH DL+ M ++P+ L + GE L AH + A+ G+ + Sbjct: 355 --LITQSLHVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFI 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + G + V G L DG IG ++ + R+ LS G V + ++ Sbjct: 413 PKKGTTMAYENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNR 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHK 502 I + G + + Sbjct: 473 REKKIVARARVHTRGFVYLKKSRDILRE 500 >gi|15829175|ref|NP_326535.1| hypothetical protein MYPU_7040 [Mycoplasma pulmonis UAB CTIP] gi|14090119|emb|CAC13877.1| conserved hypothetical protein [Mycoplasma pulmonis] Length = 631 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 148/552 (26%), Positives = 274/552 (49%), Gaps = 11/552 (1%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGGV EIG + + + + +ID G+ F G+ + P+ +++ K Sbjct: 5 KIFGLGGVHEIGKSTLVIHH----EKSIAIIDAGIKFADSSTTGLHGIIPNYSYLKKHED 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + IF+TH HEDH G + L + + ++A AI L+ K + K+ I + Sbjct: 61 QIEGIFVTHGHEDHIGGIIYLLQQVKINKIFAPKIAIEYLKYKLEDRGLRIKVEFIEIKK 120 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 D +G+ ++ HSIP+ + +++P G+++ TGD+++D I TD L Sbjct: 121 DDTHHLGSLVVDFWTAQHSIPDAFGIRVKTPDGSVLCTGDFRIDYRPIGNY-TDFSKLEQ 179 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG EG+ L+ DSTNAMR SE I K+I IM AK +++TTF+S++ RI+ II+ Sbjct: 180 IGKEGLTLLLSDSTNAMRPNHSPSENDILKDIEKIMLAAKRKIIITTFASNLIRIKVIIE 239 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 +AE++ +KI + G S+ +++ ++G IK D F+ +S Y + ++++ TGSQGE Sbjct: 240 LAEKLNKKIAVFGRSMVNGIAIGKELGYIKTPDSSFIDKKSIDQYEDKDIVILTTGSQGE 299 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL+++S + V + + DT+IFSS IPGN++ I + NRL + G + + Sbjct: 300 QLAALSRMSYEKHPQVSIRKNDTIIFSSSPIPGNKMKIELLINRLYKLGAIIKENGVDGY 359 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKML 422 +H SGH Y + ++++ +P+ HGE V H + A++ G+ V G+++ Sbjct: 360 LHTSGHAYQEEHEKIFSIAKPKYFFPYHGEYRMSVVHGQTAIRSGVKPENVIIPGIGEVV 419 Query: 423 RLFPDPIE-IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 ++ I +++ DG I +D + +R L G + V VL++ I Sbjct: 420 KMEKGKISLSSEKIEVKPVYIDGETILTESDDVVNERILLGENGFVFVVVLINKEKKIII 479 Query: 482 VPEIVDIGIPAYDGDGGKIHKLLLKTVI-TTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + Y + + + K V + + + ++ +++ +S ++ Sbjct: 480 GKPKIISKGAFYVKNSNGFVEKVNKLVHGSVLFTIKNDPNWTIRDIQKVVSQRVQVFFYT 539 Query: 541 VWGKKPLVTVFI 552 ++PLV+ + Sbjct: 540 EKRRRPLVSTTV 551 >gi|188518395|ref|ZP_02556410.2| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188998035|gb|EDU67132.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 596 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 152/550 (27%), Positives = 262/550 (47%), Gaps = 13/550 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K LGG+ EIG N + + + I+ID G+ F LPG D + ++ Sbjct: 5 KKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVANFEYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + ++ +TH HEDH G + + +++ +YAS A L+E + + K Sbjct: 61 IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYASTLAAKLIERRLSEYKDIKPPRI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + T+ Sbjct: 121 IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE-TNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S++ R+ Sbjct: 180 AKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II IA + +KI ++G S++ + + +G + + F++ + Y +++VI T Sbjct: 240 EEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ V Sbjct: 300 GSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYEN 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 360 SPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIAT 419 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ L+L + + V +G+ I +++R LS G L++ + D Sbjct: 420 NGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFK 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G + + + + +++ D + D K L+E +S +++ Sbjct: 480 KAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVK 538 Query: 536 SLLKKVWGKK 545 S++ K W KK Sbjct: 539 SIVWK-WRKK 547 >gi|185179114|ref|ZP_02555483.2| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|184209011|gb|EDU06054.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] Length = 596 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 151/550 (27%), Positives = 261/550 (47%), Gaps = 13/550 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K LGG+ EIG N + + + I+ID G+ F LPG D + ++ Sbjct: 5 KKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVANFEYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + ++ +TH HEDH G + + +++ +YA A L+E + + K Sbjct: 61 IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + T+ Sbjct: 121 IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE-TNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S++ R+ Sbjct: 180 AKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFTSNLGRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II IA + +KI ++G S++ + + +G + + F++ + Y +++VI T Sbjct: 240 EEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ V Sbjct: 300 GSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYEN 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 360 SPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIAT 419 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ L+L + + V +G+ I +++R LS G L++ + D Sbjct: 420 NGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFK 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G + + + + +++ D + D K L+E +S +++ Sbjct: 480 KAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVK 538 Query: 536 SLLKKVWGKK 545 S++ K W KK Sbjct: 539 SIVWK-WRKK 547 >gi|171920726|ref|ZP_02695725.2| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524249|ref|ZP_02557751.2| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195868002|ref|ZP_03079998.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273304|ref|ZP_03205840.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554051|ref|YP_002285021.1| metallo-beta-lactamase domain protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550481|ref|ZP_03771430.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551257|ref|ZP_03772203.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903471|gb|EDT49760.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195660162|gb|EDX53542.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660336|gb|EDX53597.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249824|gb|EDY74604.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541552|gb|ACI59781.1| metallo-beta-lactamase domain protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379072|gb|EEH01437.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379635|gb|EEH01997.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 596 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 151/550 (27%), Positives = 261/550 (47%), Gaps = 13/550 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K LGG+ EIG N + + + I+ID G+ F LPG D + ++ Sbjct: 5 KKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVANFEYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + ++ +TH HEDH G + + +++ +YA A L+E + + K Sbjct: 61 IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + T+ Sbjct: 121 IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE-TNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S++ R+ Sbjct: 180 AKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II IA + +KI ++G S++ + + +G + + F++ + Y +++VI T Sbjct: 240 EEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ V Sbjct: 300 GSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYEN 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 +H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 360 SPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIAT 419 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ L+L + + V +G+ I +++R LS G L++ + D Sbjct: 420 NGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFK 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G + + + + +++ D + D K L+E +S +++ Sbjct: 480 KAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVK 538 Query: 536 SLLKKVWGKK 545 S++ K W KK Sbjct: 539 SIVWK-WRKK 547 >gi|206895258|ref|YP_002247083.1| metallo-beta-lactamase family protein [Coprothermobacter proteolyticus DSM 5265] gi|206737875|gb|ACI16953.1| metallo-beta-lactamase family protein [Coprothermobacter proteolyticus DSM 5265] Length = 549 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 166/569 (29%), Positives = 286/569 (50%), Gaps = 40/569 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LGG+GEIG N+ + K +++DCG+ F D+PGVD + PD +++ K Sbjct: 2 IRFYALGGLGEIGKNLYVLE----KDGKILVLDCGLKF--SDVPGVDFLLPDFSYLEKRS 55 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K+++ +F++H HEDH G + + VPV+ S ++ L++A + + + +A Sbjct: 56 KDILGLFLSHGHEDHIGGVPFFLQKVKVPVFGSRLSLELVKANLGSR--AAEYEFVEVKA 113 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G+ +G F ++ V + HSIPE + L + + NI TGD+K++ + G TD +L + Sbjct: 114 GESQKLGPFKLDFVEMRHSIPEALGLYVETDEANIFFTGDYKIEVAPVSGKPTDFKALAS 173 Query: 186 IGNEGILALMCDSTNAM---------REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 IG G+ L+ DSTNA G C++E+ + + + + + G V+V+TF+S Sbjct: 174 IGERGVDFLLADSTNAEPAMMWNGGASAGDCLTEQQVYELLAKEISESSGRVIVSTFASH 233 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLI 295 + RI+ I+ IAE+ R + + G SL R + +A +G + + PRE+ + Sbjct: 234 IDRIQQILKIAEKEERSVAIEGRSLIRNLKIAEKLGYLDGLGHRIVTSQTLESLPREKQM 293 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +IA+GSQGEP SAL ++S G + V+L D VI ++ IPGNE A+ + N L+ +G Sbjct: 294 IIASGSQGEPLSALVRISSGIHKRVRLERGDKVIIAAYPIPGNERAVTDVINSLLYKGAE 353 Query: 356 VIAEDAECPVHVSGHPY--PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA-- 411 V +H SGHP + M I+P+ LV IHGE HLV H E+ + G+ Sbjct: 354 VRF------IHSSGHPCTGKDHQLIMLNLIKPKYLVPIHGEWQHLVGHAEIGKRAGLPGE 407 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHGLFL----KDGFLIGKFADLGIAKRRQLSFVGHL 467 + + NG +L + + + + DG L A + I +R ++ G + Sbjct: 408 NIFLLENGDVLVYEKEKGQPRVKKHGIENVGALIVDGILSKVEAAVAIKERMKIGSEGVV 467 Query: 468 SVNVLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRR-KDLKLL 526 V + D + + + + V +G+ + +T+ + + D K + Sbjct: 468 IVEAIFDEKQSAW-LVDTVMLGVVTDSSQSS-----VSQTLNGLIARMLNENTASDQKEI 521 Query: 527 RESISSALRSLLKKVWGKKPLVTVFINKI 555 +SI+S ++ LK + P V V +N I Sbjct: 522 EQSIASTVKDYLKSMNQ-YPEVVVRLNSI 549 >gi|223986394|ref|ZP_03636400.1| hypothetical protein HOLDEFILI_03712 [Holdemania filiformis DSM 12042] gi|223961636|gb|EEF66142.1| hypothetical protein HOLDEFILI_03712 [Holdemania filiformis DSM 12042] Length = 597 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 136/559 (24%), Positives = 261/559 (46%), Gaps = 14/559 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFIM 62 +++ LGG+ E G NM + G +I+ G+ +P+ D G++ + PD +++ Sbjct: 44 DQVRLFALGGLDEDGKNMYVVEVG----ESIFVIEAGLKYPESTDQLGIERIIPDFKYLI 99 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + AIFI+H H+D AL +L + PVY++P L+E E + ++I Sbjct: 100 ENQHRIQAIFISHGHDDVMAALPNLLRHVKAPVYSTPLTAMLIEEMLKKEGL-REIRVHR 158 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD-AILGDVTDKD 181 + + I + + SI + L I +P G IV+T ++ +D D D Sbjct: 159 VKRNSSFKIAGIPIRTFGMTQSIADGFGLSIETPQGAIVYTSEYIVDYDIHNDAFSCDIT 218 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 +L +G G+LALM +S A REG I + + ++A+G +++TT+ ++ RI Sbjct: 219 ALAEVGKRGVLALMTESVGADREGHSAPHHRITEFVEPAFEDAEGRIIITTYHQNLYRII 278 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 II++A + RK++ L+ ++ +G + +S + ++VI +GS Sbjct: 279 EIIELANKYNRKVIFYDDDLRAILKAVEKMGYYRMPIGLEIPKSKFTNELKDVVVIVSGS 338 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 + +++ GE ++L +DTV+ +S +PG E +++N L ++ VRV+ Sbjct: 339 GDHVFRRMHKVALGEDAMLRLNGQDTVVIASPVVPGTEREATNMENELYKENVRVVT--L 396 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNG 419 + S H DLK M +P + I GE LV++ +AL G + + NG Sbjct: 397 DRRKVYSMHASIEDLKMMLYLFKPTYYMPIKGEYRQLVSNANIALNMGYHADKILVLDNG 456 Query: 420 KMLRLFPDPIE-IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHY 477 ++ + ++ D++ L DG + + + R LS G + V ++++ Sbjct: 457 QIAKFVDGVLKSTADQLTLEDVLIDGNENLDVSGMVLRDREILSTDGAIIVGIVVNHKTK 516 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 + G P++ G+ Y D I K + + TV D + +R + +R + Sbjct: 517 EVIGGPDVQSRGV-IYLKDADHIVKEIGNIIERTVEDAVKEKRYENMAVRMEAKDRIVKY 575 Query: 538 LKKVWGKKPLVTVFINKIS 556 + K GK+P++ I +I+ Sbjct: 576 VLKETGKRPMILPAIVEIN 594 >gi|187766731|gb|ACD36970.1| chloroplast RNase J variant 2 [Chlamydomonas reinhardtii] Length = 767 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 171/583 (29%), Positives = 273/583 (46%), Gaps = 44/583 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G G ++++ID G+ FP G+ + PD F+ + + Sbjct: 119 LRILPIGGLGEIGMNCMLAGVG----DRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWK 174 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YAS F + L++ + + + I+F Sbjct: 175 DRIEALIITHGHEDHIGALPWVVPALDPATPIYASSFVMQLVKRRLTEYNLWDEKRFITF 234 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE VRV HSIP+ L++RS G IVHTGDWK+D++ + G+ D++ Sbjct: 235 DMRQRFQAGPFEIEPVRVTHSIPDCCGLIMRSDEGTIVHTGDWKIDENPLDGEQFDRELF 294 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIR 241 A+G+E + +M DSTN + G +SE+ + ++ + + N +G V+ T F+S++ R+ Sbjct: 295 MALGSEPVALMMSDSTNVLSPGRTLSEQVVHDSLVEKVLEHNGRGRVICTQFASNLHRLY 354 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATG 300 + A+ GRKI +G+SL + A G D L +++++ TG Sbjct: 355 GVKRAADAAGRKICFVGASLNHYLEAAWRDGRAPFDPKELMPTEQLRHANPNEVLIVTTG 414 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ L+ +R + +K D +++S++ IPGNE + + N L QG RV Sbjct: 415 SQGEPRAQLSMAARDQSNILKTLPGDLLLYSAKVIPGNEGKVTKMLNALAGQGARVRQSR 474 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE-GIACVPPVRNG 419 A+ +H SGH Y +L + Q +RPQ + +HGE L H LA G+ +RNG Sbjct: 475 AD-NLHTSGHAYQEELVELLQSVRPQHFLPVHGEYAFLTEHALLAKTRAGVNFTDVIRNG 533 Query: 420 KMLRLF------------------------PDPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 +ML + P ++ E F G G ++ I Sbjct: 534 EMLAVRERRNRNTVSTGSMAVAAARGGFEAPTMVKYDGEEPTYFFNDGGKGTGTRTEMEI 593 Query: 456 AKRRQLSFVGHLSVNVLLDN----HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT 511 R ++ G + V V + Y + + G D GK+ L V Sbjct: 594 DMRGTMAMEGVVVVGVDVIRRSAGDYGLGCGVRVTTRG---MWTDEGKLPAELTAAVENA 650 Query: 512 VVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 V L L + + A++ K+P V + Sbjct: 651 VARLS--GTCSLVEVERAAIDAVKRRCIAFNNKRPEVIAIAYE 691 >gi|187766729|gb|ACD36969.1| chloroplast RNase J variant 1 [Chlamydomonas reinhardtii] Length = 920 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 171/583 (29%), Positives = 273/583 (46%), Gaps = 44/583 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G G ++++ID G+ FP G+ + PD F+ + + Sbjct: 119 LRILPIGGLGEIGMNCMLAGVG----DRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWK 174 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YAS F + L++ + + + I+F Sbjct: 175 DRIEALIITHGHEDHIGALPWVVPALDPATPIYASSFVMQLVKRRLTEYNLWDEKRFITF 234 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE VRV HSIP+ L++RS G IVHTGDWK+D++ + G+ D++ Sbjct: 235 DMRQRFQAGPFEIEPVRVTHSIPDCCGLIMRSDEGTIVHTGDWKIDENPLDGEQFDRELF 294 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIR 241 A+G+E + +M DSTN + G +SE+ + ++ + + N +G V+ T F+S++ R+ Sbjct: 295 MALGSEPVALMMSDSTNVLSPGRTLSEQVVHDSLVEKVLEHNGRGRVICTQFASNLHRLY 354 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATG 300 + A+ GRKI +G+SL + A G D L +++++ TG Sbjct: 355 GVKRAADAAGRKICFVGASLNHYLEAAWRDGRAPFDPKELMPTEQLRHANPNEVLIVTTG 414 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ L+ +R + +K D +++S++ IPGNE + + N L QG RV Sbjct: 415 SQGEPRAQLSMAARDQSNILKTLPGDLLLYSAKVIPGNEGKVTKMLNALAGQGARVRQSR 474 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE-GIACVPPVRNG 419 A+ +H SGH Y +L + Q +RPQ + +HGE L H LA G+ +RNG Sbjct: 475 AD-NLHTSGHAYQEELVELLQSVRPQHFLPVHGEYAFLTEHALLAKTRAGVNFTDVIRNG 533 Query: 420 KMLRLF------------------------PDPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 +ML + P ++ E F G G ++ I Sbjct: 534 EMLAVRERRNRNTVSTGSMAVAAARGGFEAPTMVKYDGEEPTYFFNDGGKGTGTRTEMEI 593 Query: 456 AKRRQLSFVGHLSVNVLLDN----HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT 511 R ++ G + V V + Y + + G D GK+ L V Sbjct: 594 DMRGTMAMEGVVVVGVDVIRRSAGDYGLGCGVRVTTRG---MWTDEGKLPAELTAAVENA 650 Query: 512 VVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 V L L + + A++ K+P V + Sbjct: 651 VARLS--GTCSLVEVERAAIDAVKRRCIAFNNKRPEVIAIAYE 691 >gi|188024385|ref|ZP_02570464.2| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188018653|gb|EDU56693.1| metallo-beta-lactamase superfamily protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] Length = 596 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 151/550 (27%), Positives = 260/550 (47%), Gaps = 13/550 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K LGG+ EIG N + + + I+ID G+ F LPG D + ++ Sbjct: 5 KKSPTYVYALGGLEEIGKNTYVVEH----EDEIILIDAGIKFANASLPGFDGTVANFEYL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPC 120 +K + ++ +TH HEDH G + + +++ +YA A L+E + + K Sbjct: 61 IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRI 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I F+ F ++ RV HSIP++ + +++P G IV TGD++ D + T+ Sbjct: 121 IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDE-TNL 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + I N GI LMC+ST+A G SE+ + NI D M N KG ++TF+S++ R+ Sbjct: 180 AKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRV 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 II IA + +KI ++G S++ + + +G + + F++ + Y +++VI T Sbjct: 240 EEIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILT 299 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL ++ + L DT+I SS IPGN + + N+L + G+ V Sbjct: 300 GSQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYEN 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVR 417 H SGH ++ + M + I P L IHGE A K+ A+ +G V Sbjct: 360 SPNKKNHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIAT 419 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG+ L+L + + V +G+ I +++R LS G L++ + D Sbjct: 420 NGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFK 479 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G + + + + +++ D + D K L+E +S +++ Sbjct: 480 KAKLNSAVSISTRG-CFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVK 538 Query: 536 SLLKKVWGKK 545 S++ K W KK Sbjct: 539 SIVWK-WRKK 547 >gi|295099815|emb|CBK88904.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Eubacterium cylindroides T2-87] Length = 566 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 128/561 (22%), Positives = 250/561 (44%), Gaps = 17/561 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFI 61 E++ LGG+ E G NM + +I+ G+ FP + G++ + D +++ Sbjct: 11 TEKVRIFALGGLDEDGKNMLCIE----VDDQIYIIEAGIKFPDAKESLGIEFIIQDFSYL 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + ++ + ITH H+D GAL L + V VY SP +++ E+++ I Sbjct: 67 LENKDRIVGVIITHGHDDVMGALPYLLKQIKVDVYTSPLTAKMIQKTLRKEKITG-IKIH 125 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDK 180 + D +G + V H+ P T + I + G IV++G++ D DA+ D Sbjct: 126 PIKRNDHKRIGKRKVIFFPVTHAYPGTFGVAISTTQGYIVYSGEFIEDYDALDDKYRGDF 185 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 ++ +GNEG+ L+ +S A R G I + +++ + ++ ++ SV R Sbjct: 186 STITELGNEGVFILLQESKGAERTGHTSPNHRITPRLSQVLEQHDHSRIFISVYTQSVYR 245 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+ IID + R+++ L+ +VS ++G +L + +S R+ L+VI + Sbjct: 246 IQEIIDCCIEYNRRMLFYTKELQELVSYLEELGYEVPKELIVDPKSLDNDMRD-LVVICS 304 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G ++ ++ E+ + D ++ +S +PG E ++N + ++ ++I Sbjct: 305 GQGKSLFKMISNIANNEVDEIDFDSDDVIVIASPVVPGVEQEFKSMENDIYKEEGKIIVL 364 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 D +S HP DLK M ++P+ + + GE L + E+AL+ G + + + Sbjct: 365 DKN---VLSMHPSKEDLKMMIFLMKPKYYIPVKGEYRLLHMNSEIALEMGYSPSKILILD 421 Query: 418 NGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN- 475 NG++ ++ E+ + DG A + + R LS G + + + LD Sbjct: 422 NGQVATFENGKLKSCSMELELHDIMIDGKENWDMAGVVLKDREILSTDGVMILAIGLDAF 481 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P+I G+ Y D I + + + T+ + + D R I + Sbjct: 482 TKKIINGPDIQTRGL-IYLRDAEYITSDVAQIMEKTIEEAVANKTYDNLTTRTEIRDKVS 540 Query: 536 SLLKKVWGKKPLVTVFINKIS 556 L K K+P+V I +I+ Sbjct: 541 KYLFKQTAKRPMVLPVILEIN 561 >gi|283768307|ref|ZP_06341219.1| conserved hypothetical protein [Bulleidia extructa W1219] gi|283104699|gb|EFC06071.1| conserved hypothetical protein [Bulleidia extructa W1219] Length = 557 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 137/563 (24%), Positives = 261/563 (46%), Gaps = 15/563 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFI 61 N + LGG+ E G N+ + ++ +I+CG+ FP + D G++++ PDI+++ Sbjct: 2 NNIVRLFALGGLDEDGKNLYVVE----NNNDIFVIECGLRFPVNGDNLGIEMIVPDISYL 57 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + + IF+TH H+D G L L + P+Y +P ++E K E + KI Sbjct: 58 VEHKDRVKGIFLTHGHDDVMGGLLQLLKQIPDAPIYTAPLTALMIERKLKAEGMG-KINL 116 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD-DAILGDVTD 179 + K VG +I + SI + L I++ G +V++ ++ +D + V D Sbjct: 117 HRIRRNAKFKVGNTNIRTFGTMQSIADGFGLAIQTSEGYVVYSSEFIVDYDTHMPSFVFD 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++ + EG+LAL+C+S A REG + + I ++++ +L+T F+ ++ R Sbjct: 177 ITNVTDLAKEGVLALLCESVAATREGNSAPHHRLTNTLEPIFEDSEDRILITVFNQNLYR 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + II++A + R++ L LK ++S +G S E+++V+ Sbjct: 237 VIEIIELANKYNRRVFLYDEGLKAMMSDMAKLGYYHIPAGLEIVPSKFNNEDERVLVLVG 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+ + +++ E ++L + DTV+ +S A+PG E ++N L ++ RV+ Sbjct: 297 GTGDSIFQKVHRIANKEDSVIELRKSDTVVIASPAVPGTERLEASMENDLYKEANRVLT- 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVR 417 + S H DLK M + P+ V + GE L+A+ +AL G + + Sbjct: 356 -VDAKRSYSMHASVEDLKMMIYLMNPKYYVPVKGEYRQLIANANIALGMGYQADKIIVLA 414 Query: 418 NGKMLRLFPDPI-EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++ + + V G + DG + + + R LS G + V+++ Sbjct: 415 NGQVATFRDGILDRKYESVKVGDVMVDGKDSLDASGMVLKDRDILSTDGVIVAGVVMNHR 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + I G P+I G+ Y D I K + + T+ + + +R D R + Sbjct: 475 NKEIIGGPDIQSRGV-IYLKDADYIMKEVGNILEATINTMVKEKRYDNLEARSEAREKIA 533 Query: 536 SLLKKVWGKKPLVTVFINKISRQ 558 L K GK+P++ I +I+ Q Sbjct: 534 RYLLKETGKRPMILPAIVEINIQ 556 >gi|169837692|ref|ZP_02870880.1| peptide ABC transporter, periplasmic peptide-binding protein [candidate division TM7 single-cell isolate TM7a] Length = 429 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 220/390 (56%), Gaps = 7/390 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + ++ PLGG+GEIG NM ++ ++ I+ID G+SFP + + GVD++ PD ++ Sbjct: 27 SDHKVRITPLGGLGEIGGNMTVFE----TATSAIIIDVGMSFPSESMHGVDILIPDFDYV 82 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 K + + + ITHAHEDH GA+ + P+YA+P +G++ K + ++ Sbjct: 83 RKIKDKIAGVIITHAHEDHIGAVPYFYKEFKFPLYATPLPLGMINNKFEEHGLKEERALF 142 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 S + +G F +E + + HSI + AL I + G I+HTGD+K+D I G +D Sbjct: 143 RSVEKRKPYRIGDFEVEWIHITHSIIDASALAITTEAGTIIHTGDFKIDHTPIDGYPSDL 202 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 L G G+L L+ DSTN+ REG SE + K I AKG V+++TFSS++ R+ Sbjct: 203 GRLAHYGERGVLCLLSDSTNSYREGFTKSESSVGKTFDAIFSKAKGRVIMSTFSSNIHRV 262 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIAT 299 ID + R++ ++G S++R + A+++G IK ++F+ + +++++ T Sbjct: 263 YQAIDWGLKYNRRVCVIGRSMERNLYTAMELGYIKLDKKIFIDANEVSKFKDNEVLIVTT 322 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE SAL +++ E + +K+ D +I SS+AIPGNE +I + N L++ G V + Sbjct: 323 GSQGETMSALYRMATDEHKYIKIKPSDQIIISSKAIPGNEQSISTVLNFLIKSGANVAYQ 382 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 D +HVSGH + K M + I+P+ Sbjct: 383 DF-SEIHVSGHAAQEEQKLMLRLIKPKFSF 411 >gi|320527235|ref|ZP_08028421.1| hypothetical protein HMPREF9430_00527 [Solobacterium moorei F0204] gi|320132426|gb|EFW24970.1| hypothetical protein HMPREF9430_00527 [Solobacterium moorei F0204] Length = 555 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 133/558 (23%), Positives = 258/558 (46%), Gaps = 14/558 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LGG+ E G NM + ++ +++CG+ +P D G++++ PD ++ + Sbjct: 3 KIRIFALGGLDEDGKNMYVVE----NNEDIFVMECGLKYPDGDQLGIEMIIPDFRYLREN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIFITH HED AL +L + +PVY +P +LE K + K++ Sbjct: 59 QSRIKAIFITHGHEDVMAALPNLLREIPDIPVYTAPLTAMMLERKLKKAGI-KELNLHRI 117 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD-DAILGDVTDKDS 182 + K +G+ I + SI + + I++ G +V++ ++ +D D + Sbjct: 118 RRNAKFKIGSTEIRTFGTMQSIADGFGVAIKTEDGYVVYSSEFIVDYDTKNAAFKFDITN 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + +G+EG+LAL+ +S + R G I + I ++ K + +T F+ ++ R+ Sbjct: 178 ITDLGSEGVLALLSESVGSTRTGNSSPHHRITEQIEQYFEDTKNRMFITVFNQNLYRVIE 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 II++A + RK+V+ LK +++ +G S E ++VI +G+ Sbjct: 238 IIELATKFNRKVVIFDEELKSLMADMAKLGYYHIPAGLEVAPSAFSNDMENILVIVSGTG 297 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + +++ E ++L DTVI +S A+PG E +++ L ++ RV+ + Sbjct: 298 KSIFRKIHKMATKENDRIELRPTDTVIIASPAVPGTEREEASMEDDLYKEAGRVL--MID 355 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 S H DLK M ++P+ V + GE L+A+ +AL G + + NG+ Sbjct: 356 SRRAYSMHASIEDLKMMIYLMKPKYYVPVKGEYRQLIANANIALNMGYNADKIIVMDNGQ 415 Query: 421 MLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYN 478 + L + D+V + DG + + + R LS G + + V++++ Sbjct: 416 VAVLNDGVMAKSFDKVDVDDVMVDGNDSLDASGMVLKDREILSTDGTIIIGVVMNHVTKE 475 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I G P++ G+ Y D I K + + T+ D + +R D R + + Sbjct: 476 IIGGPDVQSRGV-IYLKDAEYIIKEVGNIMEKTINDAVKEKRYDNMSCRSEAREKISRYV 534 Query: 539 KKVWGKKPLVTVFINKIS 556 K GK+P++ I +I+ Sbjct: 535 LKETGKRPMILPAIIEIN 552 >gi|38606901|gb|AAR25441.1| metallo beta subunit lactamase [Lactobacillus delbrueckii] Length = 470 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 129/474 (27%), Positives = 222/474 (46%), Gaps = 12/474 (2%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGGV E G NM + + ++D G+ +P L G+D+V PD+ F + ++ Sbjct: 3 LGGVREQGKNMFAV----QVNDEIFVLDAGLKYPDSSLFGIDVVIPDMEFFKQYGDQVVG 58 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQAGDKV 129 IF+TH H D GAL + +PV+ S I L + + A ++ Sbjct: 59 IFLTHGHADSIGALPYILRDWDIPVFGSKLTIELAKIDVQRENKRRNNQLFNVIDADTEI 118 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 D S+ HS+P+++ +VI +P G IV+TGD+K D A TD L I Sbjct: 119 DFKNASVSFFHTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMARLAEIAGN 178 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ + + A Sbjct: 179 GVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNLNRVQQVFNAAAA 238 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG GEP + Sbjct: 239 TGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELKDVPDEKTVILETGRMGEPLQS 298 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L +++ R + + E D V ++ E + + + G VI +H S Sbjct: 299 LQKMANNRHRMITIHEGDLVFIATTPSHAVETTVAITSDMVYRAGGTVIELGRN--MHTS 356 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLF- 425 GH DL+ + ++P++LV + G+ L A K+LA++ G+ V +NG L Sbjct: 357 GHATGRDLQTLIDLLKPRILVPVIGDYRLLEAVKDLAVETGMDPDDVYITQNGDCLEYDT 416 Query: 426 -PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 D V + DG +G ++ + R LS G V +D Sbjct: 417 KRGQFFRGDAVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKKK 470 >gi|311696938|gb|ADP99811.1| metallo-beta-lactamase family protein [marine bacterium HP15] Length = 460 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 175/461 (37%), Positives = 259/461 (56%), Gaps = 15/461 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD--------- 52 + +L FLPLGG GEIGMN+ LYG+ W+M+DCGV+FPK D Sbjct: 4 EQSDLWFLPLGGTGEIGMNLNLYGH----DGAWLMVDCGVTFPKPGRIAADGTVHHRGEP 59 Query: 53 -LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 + D FI R+ L + ITHAHEDH GA+ LW L P+Y S F +L K Sbjct: 60 PVQMADPAFIADRRERLAGLVITHAHEDHVGAVPYLWPLLQCPIYTSRFTAEILRRKLAE 119 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + ++P I + G VG FS++ + + HSIP+ AL+IR+ GNI H+GDWKLD+ Sbjct: 120 FDLLHRVPIIEVETGQSKQVGPFSVQWLALTHSIPDPNALMIRTAAGNIFHSGDWKLDEQ 179 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 ++G + + NEG+ A++CDSTNA G +SE + + + ++A+G V+VT Sbjct: 180 PLVGHGYSPKTFTDLANEGVNAMVCDSTNATVSGHSVSEAALHEGLLRATRSAEGRVVVT 239 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 F S+++R+ ++ IA + GR + LLG SL + A G+ ++ G PR Sbjct: 240 CFGSNIARLYTLASIARETGRYMGLLGRSLINMSGAARAAGLWDSADQLINPAHLGYLPR 299 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 ++++ +ATGSQGEPR+AL +L+ G + +L DTVIFS+RAIPGNE +I + RL E Sbjct: 300 DEVLAVATGSQGEPRTALRRLASGTHPDFELEAGDTVIFSARAIPGNEESIEALVTRLQE 359 Query: 352 QGVRVIA-EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI 410 GVRVI EDA+ P+H SGHP +L+ MY+W++P + + +HGE H+ H ++A G+ Sbjct: 360 LGVRVITAEDADLPIHASGHPAQEELELMYKWVKPAIAIPVHGEAEHMETHADIAKATGV 419 Query: 411 ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFA 451 RNG + + P P V G + + Sbjct: 420 PRAMVGRNGDLFMIRPVPGIRRQVVETGRLGWHKEGLVRVE 460 >gi|309807088|ref|ZP_07701067.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b] gi|308166518|gb|EFO68718.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b] Length = 481 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 122/480 (25%), Positives = 215/480 (44%), Gaps = 10/480 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D ++ + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTVSFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP +L +++ R +K+ D V ++ E + + + G V Sbjct: 298 RMGEPLKSLQKMATNRHRMIKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLG 357 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRN 418 + H SGH DL+ + ++P+ L+ + GE L HK LA++ + +N Sbjct: 358 YDK--HTSGHATGRDLQMLIDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKN 415 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN 478 G L L D + D V + DG +G ++ + R LS G V +D Sbjct: 416 GDCLLLDDDKFYLTDPVPAEDTMIDGSGVGDVGNIVLRDREILSDDGIFIAAVTIDRKRK 475 >gi|239995570|ref|ZP_04716094.1| metallo-beta-lactamase family protein [Alteromonas macleodii ATCC 27126] Length = 462 Score = 364 bits (934), Expect = 3e-98, Method: Composition-based stats. Identities = 172/461 (37%), Positives = 253/461 (54%), Gaps = 22/461 (4%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP---GV------- 51 ++L FLPLGG GEIGMN+ LYG+ +W+M+DCGVSF + +P GV Sbjct: 5 SADDLWFLPLGGTGEIGMNLNLYGH----DGQWLMVDCGVSFDESLVPAYKGVSQASNQN 60 Query: 52 -------DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 +V P+ +FI K+++ L I ITHAHEDH GA+ LW P+Y + F + Sbjct: 61 TFKATTHRVVAPNPSFIAKQKEALAGIVITHAHEDHVGAIPYLWERFQKPIYTTSFTAEV 120 Query: 105 LEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 L K +++ +I I AGD +G FS+ + + HS+PE AL I +PVG ++HT Sbjct: 121 LRRKLARSKLANRIAIIEVDAGDTKQIGPFSVNWLAITHSLPEPFALKINTPVGTVLHTA 180 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 DWK+D + I G D +G+E ILA++ DSTNA + G ISE+ + + Sbjct: 181 DWKIDANPITGLPFDVSLYKRLGSENILAMVGDSTNATKPGFSISERNCYDGLLSTIAPL 240 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 KG +V F S+++R+ S+ +A++ R + L G SL + +A GI D + Sbjct: 241 KGRAVVGCFGSNIARLISLAKVAKKTKRYMALYGRSLMNMYGIAKQQGIWPDDLPVTDPQ 300 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGH 344 G P +++ +ATGSQGE +ALA+ ++ ++ L + DTV+FSS IPGNE ++G Sbjct: 301 HLGYLPPHEVLAVATGSQGEKNTALARFAKDTHPHLSLDKGDTVLFSSIVIPGNEESVGR 360 Query: 345 IKNRLVEQGVRVIA-EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 + L E+GV VI ED+ P+H SGHP +LK MY W++P + + +HGE HL AH Sbjct: 361 LSKALQEKGVTVIHSEDSTLPIHASGHPCEEELKLMYHWVKPTIAIPVHGEHQHLQAHAN 420 Query: 404 LALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDG 444 +A GI +NG + RL P P V G Sbjct: 421 IAKACGIKKTYVGQNGDLYRLAPQPSIRRQVVPVGRIPVQQ 461 >gi|326430409|gb|EGD75979.1| metallo-beta-lactamase superfamily [Salpingoeca sp. ATCC 50818] Length = 613 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 167/551 (30%), Positives = 284/551 (51%), Gaps = 14/551 (2%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +P+GG EIGMN LY + +++M+D GV+ + G + PD+ ++M+ + L Sbjct: 69 IPMGGAEEIGMNCNLYVH----KNRFLMVDLGVNL-TNIGNGSTAIMPDLDYVMRNKHKL 123 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 +A+ ITHAHEDH GA+ LW L P+Y + F ++ A+ + I + K Sbjct: 124 VALVITHAHEDHIGAVATLWPDLKCPLYCTKFTAEMIRARLPPNVRIPPLHIIDQK--TK 181 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V FS + HSIPE+ A+++ + G+IVHTGDWK D +LG D ++ +G Sbjct: 182 VTTKPFSFTLQHMTHSIPESHAVILHTEQGHIVHTGDWKHDSAPLLGPPFDYAAMNKLGE 241 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIRSIIDI 246 EG+LA++ DSTNA+ EG + E +++ + + + ++T FSSSVSR+ +D Sbjct: 242 EGVLAVVGDSTNAVVEGESVPESEVQRGLRERLLKVEPDRQCVLTCFSSSVSRVGIALDC 301 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATGSQGEP 305 A Q+ R+ L+G ++ +A D G + + Q +++ATG QGEP Sbjct: 302 APQMNRRPALMGHAMLTTSGIAHDCGYLPTLPSTRGLHEVVTKHAPAQCLMLATGCQGEP 361 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC-P 364 +AL++++ G+ V L D VIFSSR IPGNE+ + + N+L +GVR+I + + P Sbjct: 362 AAALSRMASGDHPIVHLGPDDVVIFSSRVIPGNELDVQRVVNQLKRRGVRIIRDGEDGVP 421 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H SGH Y D++ + +RPQ++V +HGE LHL H LA ++G+ RNG ++ L Sbjct: 422 THASGHAYRGDIRMLLSRLRPQMVVPVHGEYLHLEEHCSLAREQGVKHTIIPRNGNVIHL 481 Query: 425 FP-DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVP 483 P + +++ +V G + DG L+ + + R G + V+L + P Sbjct: 482 HPHEGPKVVGQVNAGQLVMDGRLLRRMDSPIMQDRMTQQAQGACFITVVLSADNQLLVPP 541 Query: 484 EIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWG 543 + G+ D ++ + + +L +++ +A+ ++ G Sbjct: 542 VLSHRGLI--DKTETQLQQQFVALSDMLGEELSGLNSPPDSVIQGVAQAAVMGFCQRRLG 599 Query: 544 KKPLVTVFINK 554 K+P+ V I + Sbjct: 600 KRPVCEVHIVR 610 >gi|152994929|ref|YP_001339764.1| beta-lactamase domain-containing protein [Marinomonas sp. MWYL1] gi|150835853|gb|ABR69829.1| beta-lactamase domain protein [Marinomonas sp. MWYL1] Length = 447 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 168/439 (38%), Positives = 256/439 (58%), Gaps = 9/439 (2%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPD 57 E+L FLPLGG GEIGMNM LYG+ +W+M+DCGVSF + DDL ++V D Sbjct: 4 SQEDLWFLPLGGTGEIGMNMNLYGH----DGQWLMVDCGVSFNEPLTADDLRTSEIVCAD 59 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 FI ++++ L I ITHAHEDH GAL LW PVY + F +L K ++ + Sbjct: 60 PRFISEQKERLAGIVITHAHEDHVGALPFLWRRFKCPVYTTAFTAEVLRRKLAQVGLTDQ 119 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +P I + + +G F+++ + + HS+PE A+ I +P G I HTGDWK+D ILGD Sbjct: 120 VPIIEVKENETKKIGVFNVKWLGLTHSVPEPYAMTIDTPAGRIFHTGDWKIDKKPILGDA 179 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + A+ E ILA++CDSTNA+++G SE + + ++ K V+V FSS+V Sbjct: 180 FSPAAFQALAKENILAMVCDSTNALKDGFSPSESDCYQGLLKTIEAEKNRVVVGCFSSNV 239 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 +R+ ++ +A++ GR + L+G SL +VS A G+ D + G PRE+++ + Sbjct: 240 ARLVALGLVAKETGRYLALIGRSLTNMVSAARVTGLWPDDLPIIDAAHLGYLPREEVLAV 299 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR-V 356 TGSQGEPR+ L +L+ ++ L D VIFSS IPGNE AI + + + +R + Sbjct: 300 VTGSQGEPRATLNRLAADNCFDLSLEADDLVIFSSMRIPGNEQAIDRLAEQFKGRKIRTL 359 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 A + + +HVSGHP +LK++Y W++PQ+ + +HGEP HL A+ ++A + Sbjct: 360 QAHETDLTIHVSGHPCREELKQLYTWVQPQLAIPVHGEPKHLDANADVAKLSHVPDQLIG 419 Query: 417 RNGKMLRLFPDPIEIIDEV 435 RNG + +L P+ +V Sbjct: 420 RNGDLYQLAPNISIRRQQV 438 >gi|224541886|ref|ZP_03682425.1| hypothetical protein CATMIT_01059 [Catenibacterium mitsuokai DSM 15897] gi|224525192|gb|EEF94297.1| hypothetical protein CATMIT_01059 [Catenibacterium mitsuokai DSM 15897] Length = 565 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 249/572 (43%), Gaps = 24/572 (4%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK+ + +PLGG E+G +M + K +ID G FP D GVD++ P + Sbjct: 1 MKHNNVKIMPLGGQAEVGKSMYSIE----VNGKIFIIDAGYRFPDLDKLGVDIIIPSFDY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKR----VYERVS 115 +++ +K+++AI ITHAH D AL L + + VPVYA L+E +++ + Sbjct: 57 LIERKKDIVAIIITHAHNDVMAALPYLLNAVQGVPVYAPSLTADLIEMMIDHYQRHQKKN 116 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + I + D + + +E HSIP ++ + I +P G +V+ G++ +D + G Sbjct: 117 LHMELIRVRRDDSIKIAGIPVEFFPETHSIPGSVGVAIWTPDGYVVYGGEFIIDFGSPEG 176 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + + IG +G+LALM +S+ A G + I + ++A G +++++++ Sbjct: 177 FRCNIQKMMEIGKKGVLALMVESSGASNPGYTSPNHKLTNKIESMFEDASGRIIISSYAQ 236 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSS-LKRVVSVAIDVGIIKKDQLFLSDESFGLY----- 289 +V R + I+++ ++ R+IV G + S+ K + + + G Sbjct: 237 NVFRTKEIVELTKKYHRQIVFYGRDKYDQTNSIIRLERTTHKPVITVPSKYLGKKENVGI 296 Query: 290 --PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 +++ +G+ S + + G +K+ E DT I +S +PG E +N Sbjct: 297 PAKDSSYVILLSGAPNTIYSDICDILDGGDELLKIREGDTFIVASPVLPGTEKIANKAQN 356 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 L V + S H D+K Q P+ V I GE VA+ +A + Sbjct: 357 DLFRTPADV--HILKNKQLPSMHASIEDIKVFIQLFNPKYYVPIKGEYRRFVANAHIANE 414 Query: 408 EGI--ACVPPVRNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGKFADLGIAKRRQLSFV 464 GI + + NG+ +E EV+ + DG +G + I R QLS Sbjct: 415 MGIDNDHIVILDNGEKCTFKNGQLEEGREVIEIEDVMIDGIGVGDVGEKVIDDRIQLSND 474 Query: 465 GHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDL 523 G + V V +D I + G Y D G + K ++ V L + D+ Sbjct: 475 GIVVVGVTIDARTKEIIAQTDCQTRGF-VYLKDSGYVIKEIINICEGVVSKLKDDPQVDV 533 Query: 524 KLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + +R + + K GKKP+ + +I Sbjct: 534 QDIRNEMKELSMRYIMKETGKKPVFIGVVVEI 565 >gi|332142126|ref|YP_004427864.1| metallo-beta-lactamase family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327552148|gb|AEA98866.1| metallo-beta-lactamase family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 461 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 168/459 (36%), Positives = 256/459 (55%), Gaps = 21/459 (4%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD----------- 52 ++L F+PLGG GEIGMN+ LYG+ + +W+M+DCGVSF + +P Sbjct: 7 DDLWFVPLGGTGEIGMNLNLYGH----NGRWLMVDCGVSFDEPLVPAYKKGSNIGSTESE 62 Query: 53 -----LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 +V PD +FI ++ L I ITHAHEDH GA+ LW P+Y + F +L Sbjct: 63 GATHRVVAPDPSFIANQKDALAGIVITHAHEDHVGAIPYLWERFKTPIYTTSFTAEVLRR 122 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 K +++ ++P I AGD + +G FS+ + + HS+PE AL I +PVG ++HT DWK Sbjct: 123 KLARSKLANRVPIIEVDAGDTLQIGPFSVNWLAITHSLPEPFALKIATPVGTVLHTADWK 182 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 +D + I G D + +G E ILA++ DSTNA + G ISE+ + + KG Sbjct: 183 IDANPITGLPFDVNLYKQLGRENILAMVGDSTNAPKPGFSISERNCYDGLLSTIAPIKGR 242 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 V+V F S+++R+ SI +A++ R + L G SL + +A GI D + G Sbjct: 243 VVVGCFGSNIARLISIAKVAKKTKRYMALYGRSLMNMYGIAKQQGIWPDDLPITDPQHLG 302 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 P +++ +ATGSQGE +ALA+L++ +++L + DTV+FSS IPGNE ++ + Sbjct: 303 YLPPHEVLAVATGSQGEKNTALARLAKDCHPHLQLEKGDTVLFSSIVIPGNEESVERLSK 362 Query: 348 RLVEQGVRVIA-EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 L +GV VI ED+ P+H SGHP +LK MY W++P++ + +HGE HL AH ++A Sbjct: 363 ALAAKGVAVIHSEDSTLPIHASGHPCEEELKLMYHWVKPEIAIPVHGEHSHLKAHADIAK 422 Query: 407 QEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGF 445 G++ +NG + RL P P + G Sbjct: 423 ASGVSKHYVGQNGDLYRLAPQPSIRRQVIPVGRIPVQQD 461 >gi|88706452|ref|ZP_01104157.1| metallo-beta-lactamase family protein [Congregibacter litoralis KT71] gi|88699388|gb|EAQ96502.1| metallo-beta-lactamase family protein [Congregibacter litoralis KT71] Length = 460 Score = 363 bits (931), Expect = 6e-98, Method: Composition-based stats. Identities = 168/429 (39%), Positives = 248/429 (57%), Gaps = 10/429 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITF 60 ++L FLPLGG GEIGMN+ LYG+ + W+M+DCG++F +D P V PD F Sbjct: 7 KDLWFLPLGGCGEIGMNLNLYGH----NGAWLMVDCGITFERDSHRVRPRVQT--PDPQF 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ R L I +THAHEDH GA+ LW VPVY +PF +L K P Sbjct: 61 IVEHRDALAGIVLTHAHEDHIGAMPLLWERFPVPVYTTPFTAEVLRRKAAGRGGKVPSPL 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G+ +G F +E + + HS P+T AL IR G ++HT DWK+D +G D Sbjct: 121 IECLPGESQRIGPFDVEWLPITHSTPDTCALHIRCDAGKLLHTADWKIDKAPQVGPGFDH 180 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 A G + A++CDSTNA+ G +SE ++ + + +G V+V F+S+++RI Sbjct: 181 ALFAAAGASQLDAVICDSTNAVVPGHSVSESVVRDGLGKTVAGCEGRVVVACFASNIARI 240 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 S+ID+A++ GR + LLG SL+ + S A+ VG++++ + G PRE ++++ATG Sbjct: 241 HSLIDVADKTGRYLTLLGRSLQTMHSAALTVGLLERSPRLIEAGHLGYLPREDILIVATG 300 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI-AE 359 SQGE +AL +L+ G ++L DTVI SSR IPGNE + + R +QG+ VI ++ Sbjct: 301 SQGEHGAALQRLANGSHPQLELEPGDTVILSSRIIPGNEEPVERLIKRFRDQGITVIDSD 360 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 A VH SGHP ++L MYQW RP++ V +HGE H+ A+ ++A G NG Sbjct: 361 GAVETVHASGHPCADELASMYQWARPRLAVPVHGEQRHMKANAKIARGNGAKMALTGENG 420 Query: 420 KMLRLFPDP 428 + L P+P Sbjct: 421 DLFYLAPEP 429 >gi|88797891|ref|ZP_01113479.1| metallo-beta-lactamase family protein [Reinekea sp. MED297] gi|88779568|gb|EAR10755.1| metallo-beta-lactamase family protein [Reinekea sp. MED297] Length = 450 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 159/429 (37%), Positives = 249/429 (58%), Gaps = 9/429 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDI 58 +++L FLPLGG GEIGMNM LYG+ W+M+DCGV+F D D++ D Sbjct: 8 SKDLYFLPLGGTGEIGMNMNLYGH----DDHWLMVDCGVTFKDTLTPDSTELFDVISADP 63 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 FI + L + +THAHEDH GA+ DLW L PVY + F L K + ++ Sbjct: 64 AFITAQSDKLCGLVLTHAHEDHVGAVADLWPRLQCPVYTTRFTAEFLRRKLAQHSLLDRV 123 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 P I +G +D+G F++E + + HS+PE ALVIR+ GN+ HTGDWK+D ++G+ Sbjct: 124 PIIEVDSGATLDIGPFNVEWLPLTHSLPEPHALVIRTSAGNVFHTGDWKIDPQPVIGEPF 183 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 D A+G+ I A++CDSTNA R G +SE +Y+ +K +G V+V F S+++ Sbjct: 184 DPTPFQALGDGSIDAMVCDSTNANRPGRSLSEGACFAGLYEQVKTTEGRVIVGCFGSNIA 243 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 R+ ++ IA++ GR + L G SL+ +VS A G+ D + P +++ IA Sbjct: 244 RLITLCRIAQETGRYVGLYGRSLQTMVSTAKATGVWPADCDIIDSRHLAYLPPREVLAIA 303 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR-VI 357 TGSQGEPR+AL +++ + ++ D VIFS+ IPGNE ++ ++ L + V V+ Sbjct: 304 TGSQGEPRTALQRMATDSHYELDISAGDRVIFSAIVIPGNETSVENLVRLLKLKKVEVVM 363 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 A D E P+H SGHP +D+ +Y+W++P++ + +HGE H++A+ +A G+ + Sbjct: 364 AADCETPIHASGHPSADDVADLYRWVQPRIAIPVHGEAEHMLANANIARTSGVRKQLTGQ 423 Query: 418 NGKMLRLFP 426 NG + + Sbjct: 424 NGDLFVISG 432 >gi|319937302|ref|ZP_08011709.1| metallo-beta-lactamase [Coprobacillus sp. 29_1] gi|319807668|gb|EFW04261.1| metallo-beta-lactamase [Coprobacillus sp. 29_1] Length = 564 Score = 359 bits (922), Expect = 6e-97, Method: Composition-based stats. Identities = 129/570 (22%), Positives = 242/570 (42%), Gaps = 23/570 (4%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK + + F+P+GG E+G +M + + K +ID G FP D GVD++ P T+ Sbjct: 1 MKKDIVRFIPMGGQAEMGKSMYCFEI----NDKIFIIDSGFRFPDSDKLGVDVIIPSFTY 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV----YERVSK 116 + + + ++AI ITHAH+D AL L + PVYA L+E + RV Sbjct: 57 LEERAEQIVAIIITHAHDDAMAALPYLLQTVKAPVYAPNLTADLIEQMVERFQRHNRVRL 116 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + +D+ IE V HSIP ++ + + + G IV++G++ +D A G Sbjct: 117 NLDLRRVKRNASIDIAGVPIEFFPVTHSIPGSVGVALWTDQGYIVYSGEFIIDFGAPEGF 176 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D + IG +G+LAL+ +S+++ EG + I I +++ +++++++ + Sbjct: 177 RCDIQKMMEIGKKGVLALLVESSSSKHEGYTSPNHKLTNKIDHIFEDSNERIIISSYAQN 236 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD--------ESFGL 288 V R + II++ ++ R+IV G + + +G K+ + Sbjct: 237 VFRTKEIIELTKKYKRQIVFYGRDKYDNTNSLLRLGQKSKEPIIDVPNRLLGKKENIGKP 296 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 +++ +GS + + G +KL + DT I +S +PG E N Sbjct: 297 QYDSNYVILLSGSPRRIYHDICDIIDGGDDLLKLRKGDTFIVASPVLPGTEKIANKAHNG 356 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 L + + + S H D+K + Q P+ + I GE H +++ +A Sbjct: 357 LYKTDAHI--HLLKNKDLFSMHASEEDIKVIIQIFNPKYYIPIKGEYQHFISNMHIAKDM 414 Query: 409 GI--ACVPPVRNGKMLRLFPDPIEII-DEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG 465 GI + + NG+ + +E D + DG IG + I R QL+ G Sbjct: 415 GIKDDHIVILDNGERITFKNGELESARDTFEIEDIMIDGIGIGDVGEKVIDDRIQLANDG 474 Query: 466 HLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK 524 + V + + I + G Y D + K +++ + + ++ Sbjct: 475 VVIVGLTISRETKDIIAQTDCQTRGF-VYLKDSEYVIKHIIEICENVIAKYKENPELEVA 533 Query: 525 LLRESISSALRSLLKKVWGKKPLVTVFINK 554 +R + + K GKKP+ + + Sbjct: 534 DVRAMMKDQCMKYIVKETGKKPVFIGVVVE 563 >gi|53803598|ref|YP_114721.1| metallo-beta-lactamase family protein [Methylococcus capsulatus str. Bath] gi|53757359|gb|AAU91650.1| metallo-beta-lactamase family protein [Methylococcus capsulatus str. Bath] Length = 461 Score = 358 bits (920), Expect = 1e-96, Method: Composition-based stats. Identities = 172/452 (38%), Positives = 256/452 (56%), Gaps = 8/452 (1%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 FLPLGG GEIGMN+ LYG+ WI +D G++F DD P ++ PD FI R+ Sbjct: 10 FLPLGGTGEIGMNLTLYGH----DGAWIAVDMGITFGGDDFPDHAVMMPDPAFIAARRER 65 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 L I +TH HEDH GAL LW L PVYA+PF L K + P + G+ Sbjct: 66 LAGIVLTHGHEDHVGALPYLWKRLRCPVYATPFTAALARTKLARAGI-DDAPLVEISPGE 124 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + +G F++E + + HSIPE L+I +PVG ++HTGDWKLDD ++G D L A+ Sbjct: 125 RFRIGPFAVEYIVMTHSIPEPNTLLIGTPVGAVLHTGDWKLDDRPVVGRGYDHSRLSALR 184 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 E +LA++CDSTNAM G E + + + + A G ++VT F+S+++R+ ++ +A Sbjct: 185 REPLLAMVCDSTNAMVPGRTGFEGDLYEPLLALGAEAAGRIVVTAFASNIARLVTLARVA 244 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATGSQGEPR 306 +GR+ ++G +++ +V+VA G D + G PR ++ TGSQGEPR Sbjct: 245 RSLGRRFGVVGPAMEHMVAVARATGHWPDDLPELVEARHIGHLPRSEVFAACTGSQGEPR 304 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 SALA L++ R++ L DTV+FSSR IPGNE A+ I RL E GV ++ + + VH Sbjct: 305 SALALLAQDLHRDLSLDAGDTVVFSSRVIPGNERAVARIHQRLRETGVHLVTDA-DARVH 363 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 VSGHP DL+++Y+W++P ++ +HG P HL A+ ELA + V+NG + RL Sbjct: 364 VSGHPAQEDLRQLYEWVQPPAVIPVHGTPRHLAANAELAAACHVPHACVVQNGDICRLSR 423 Query: 427 DPIEIIDEVVHGLFLKD-GFLIGKFADLGIAK 457 I+ +D + G + + + Sbjct: 424 AGIQKLDGIETGRLFVQPDGRLAPVPKDILRE 455 >gi|126665320|ref|ZP_01736302.1| metallo-beta-lactamase family protein [Marinobacter sp. ELB17] gi|126629948|gb|EBA00564.1| metallo-beta-lactamase family protein [Marinobacter sp. ELB17] Length = 460 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 171/435 (39%), Positives = 256/435 (58%), Gaps = 15/435 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD---------- 52 + +L FLPLGG GEIGMN+ LYG+ +W+M+DCGV+FPK D Sbjct: 5 SNDLWFLPLGGTGEIGMNLNLYGH----DGRWLMVDCGVTFPKPGRLAADGSMHHHGEPP 60 Query: 53 LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 + D FI R+ L + ITHAHEDH GA+ LWS L P+Y + F +L K Sbjct: 61 VQMADPAFIADRRETLCGLVITHAHEDHVGAVPYLWSLLQCPIYTNRFTAEILRRKLAEF 120 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 + ++P + + D+ +G F+++ + + HSIP+ AL+IR+PVGNI H+GDWKLDD Sbjct: 121 DMLHRVPIVVMETNDRRQIGPFNVQWLALTHSIPDPNALMIRTPVGNIFHSGDWKLDDQP 180 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 ++G K + + EG+ A++CDSTNA +G +SE + K + +K+A+G V+V Sbjct: 181 LIGHGYSKQTFTDLAIEGVAAMVCDSTNATVKGHSVSEGALHKGLLSAVKSAEGRVVVAC 240 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 F S+++R+ ++ +A + GR + LLG SL + S A G+ ++ G P Sbjct: 241 FGSNIARLHTLAAVARETGRYMGLLGRSLVNMSSAAKATGLWHSADELINPAHLGYLPPH 300 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 +++ +ATGSQGEPR+AL +L+ G +V+L DTVIFS+RAIPGNE I + +L Sbjct: 301 EVLAVATGSQGEPRTALRRLANGSHPDVELEAGDTVIFSARAIPGNEELIAALIGQLQGM 360 Query: 353 GVRVIA-EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA 411 GV+VI E + P+H SGHP +L+ MY+W++P V + +HGE H+ H LA Q G+ Sbjct: 361 GVKVITAEQCDLPIHASGHPAQEELEAMYRWVQPAVAIPVHGEEEHMAVHARLAKQIGVP 420 Query: 412 CVPPVRNGKMLRLFP 426 RNG + + P Sbjct: 421 KTLVGRNGDLFMIRP 435 >gi|321309573|ref|YP_004191902.1| metallo-beta-lactamase superfamily protein [Mycoplasma haemofelis str. Langford 1] gi|319801417|emb|CBY92063.1| metallo-beta-lactamase superfamily protein [Mycoplasma haemofelis str. Langford 1] Length = 610 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 156/558 (27%), Positives = 275/558 (49%), Gaps = 13/558 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITFIMKER 65 F LGGV EIG N + + I+ID G+ F PG+ V P ++++ K + Sbjct: 36 KFFALGGVEEIGKNTYCVEH----DDEIIVIDAGIKFVNRKHFPGLSGVIPSLSYLKKNQ 91 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP-FAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ ITH HEDH G + + ++ PV SP A L++ K ++ + + + Sbjct: 92 HKIKALVITHGHEDHIGGIVHVLKEVNFPVIYSPIMASELVKRKVADHKLPAQ-NVVLYS 150 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 F+I+ +VNHSIP++ L + +P G IV +GD++ D + D + Sbjct: 151 PNSVFFTKHFAIDFYKVNHSIPDSFGLCLVTPNGVIVSSGDFRFDFASRNDK-FDLQKIS 209 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 AI + L+C+STNA + G SEK + I++IM + KG +++T FSS++ RI I Sbjct: 210 AISTRKVDLLLCESTNAEQPGFNESEKVVINEIHNIMSSTKGRIIITFFSSNIGRIEEIF 269 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 IA + +KI++LG S+ V+ + +VG +K + + +S + YP +++++I TGSQG Sbjct: 270 KIAVNLNKKIIILGHSIDSNVTASKNVGYLKVNENIIISPKDINSYPDDEILIICTGSQG 329 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E SAL +S+ + +KL D++IFSS IPGN A+ + NRL + G + A Sbjct: 330 EENSALNNISKNKHPTIKLKPSDSIIFSSNVIPGNTAAVEGVINRLHKSGCNIYLNSANL 389 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKM 421 +H SGH + + + P+ +V IHGE + A ++ G + V+NG + Sbjct: 390 KIHSSGHASKLEQQLFVSLVNPKYIVPIHGETRMMKALARNCVEIGFNEKNIFIVKNGDV 449 Query: 422 LRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIF 480 + L + + D +V L DG + KR +L G + +++LLD+ + Sbjct: 450 VHLLNGVVSVSDEKVDASLLYIDGDETTSEGESISKKRTELGSKGLVVLHILLDSKKSEL 509 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 + + + + K L T+ + +L + ++ + I+S L + Sbjct: 510 HLISPIANAGSFFLSESVDFVKKLSSTIQNEIKNLLKSKKTK-SEISAMIASLLAKEIYS 568 Query: 541 VWGKKPLVTVFINKISRQ 558 +KP V + + +++ Sbjct: 569 EKRQKPNVEIIVTDVAKD 586 >gi|119477737|ref|ZP_01617887.1| metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2143] gi|119449240|gb|EAW30480.1| metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2143] Length = 441 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 167/423 (39%), Positives = 249/423 (58%), Gaps = 5/423 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L FLPLGG GEIGMN++LYG+ + +W+M+DCG+ F G ++ P + FI Sbjct: 7 DLWFLPLGGCGEIGMNLSLYGH----NGQWLMVDCGIGF-DRAAVGTRIIAPSVEFIAAR 61 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 R+ L+ + +THAHEDH GA+ LW L PVY + F +L K V + KK+ + Sbjct: 62 RQQLVGLLVTHAHEDHVGAVAHLWPELKCPVYCTRFTHEILRRKLVEAGLEKKVDVHIVE 121 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G F I+ + HS PE+ AL+IR+P+GNI HTGDWK+D + ++G ++ SL Sbjct: 122 PQLRHQLGHFDIQWFDMTHSAPESQALMIRTPLGNIFHTGDWKIDPNPVVGAKINEASLR 181 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 A+G EG+LA++CDSTNAM G SE + N+ + KG ++V F S+V+R+ ++ Sbjct: 182 ALGKEGVLAMVCDSTNAMLAGHSPSEGILYDNLLRHAQQVKGRIIVACFGSNVARLHTLA 241 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A GR LLG SL A G+ + F+ + G P +++ +ATGSQGE Sbjct: 242 TVALATGRFPALLGRSLHNYYRAAKASGLWPLGRDFVDAQHLGYLPPKEVFAVATGSQGE 301 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +AL++L+ G ++LA D VIFSSR IPGNE ++ ++ L +GV +I + P Sbjct: 302 AGAALSRLAAGSHPALELAPGDCVIFSSRVIPGNEESLENLCASLKAKGVDLILDTDTTP 361 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +H SGHP ++L+ MY WI+P V + +HGE HL AH A GI NG ++ L Sbjct: 362 IHASGHPAQDELRVMYDWIKPHVSIPVHGENQHLRAHAGFAKSLGIPAQIAGSNGDLITL 421 Query: 425 FPD 427 P+ Sbjct: 422 APN 424 >gi|254492430|ref|ZP_05105602.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga thiooxidans DMS010] gi|224462322|gb|EEF78599.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga thiooxydans DMS010] Length = 458 Score = 355 bits (911), Expect = 1e-95, Method: Composition-based stats. Identities = 168/442 (38%), Positives = 248/442 (56%), Gaps = 13/442 (2%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF------PKDDLPGV--DLV 54 + FLPLGG GEIGMN+ LYG+ + +W+M+DCGV+F + + G + Sbjct: 5 ESDFWFLPLGGTGEIGMNLNLYGH----NGRWLMVDCGVTFESGTDVDGEPILGARAHVQ 60 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 D FI + L + ITHAHEDH GA+ LW P+Y + + +L K + Sbjct: 61 MADPQFITDRKDQLDGLIITHAHEDHIGAVPYLWERFQCPIYTTAYTAEILRRKLQEAGL 120 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 ++K+P A ++DVG F ++ VR+ HSIPE LVI +P G + HT DWKLD +L Sbjct: 121 TEKVPVHVVDADTELDVGVFHLQWVRLTHSIPEPFGLVISTPAGRVFHTADWKLDAAPVL 180 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G+ A+ I A++CDSTNA G SE + K + ++ A G V+VT F Sbjct: 181 GERYQAQDYQALAELDIDAMVCDSTNADVPGWSASEASLYKGLKHHVEQASGRVVVTCFG 240 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 S+++R+R+I DIA++ GR + LLG SL + A G + F+ G P++ + Sbjct: 241 SNIARLRTIADIAQETGRHLGLLGRSLINTYTAAKRTGFWSSVETFVDPHHLGYLPKQTV 300 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +++ATGSQGEPR+AL +LS R+++L DTVIFSS+ IPGNE AI + RL + Sbjct: 301 LLVATGSQGEPRTALNRLSHNSFRDMQLEPGDTVIFSSKVIPGNEAAIESLIERLKAMQI 360 Query: 355 RVIA-EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 VI +++ P+H SGHP +LK MY+W++P+ + +HGE HL A+ +A GI+ Sbjct: 361 DVITVDNSRMPIHASGHPAMEELKAMYEWVKPRCSIPVHGEFHHLRANARVAKSVGISEQ 420 Query: 414 PPVRNGKMLRLFPDPIEIIDEV 435 +NG M + P V Sbjct: 421 LEGKNGDMYFIAPVRGIRRGAV 442 >gi|254480693|ref|ZP_05093940.1| RNA-metabolising metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2148] gi|214039276|gb|EEB79936.1| RNA-metabolising metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2148] Length = 459 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 164/444 (36%), Positives = 248/444 (55%), Gaps = 8/444 (1%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF-PDITFIMK 63 +L F+PLGG GEIG N+ LYG+ +W+++DCG+ F D PG + V PD FI Sbjct: 21 DLWFVPLGGCGEIGSNLNLYGH----DGQWLIVDCGIGF--DREPGAEAVITPDPGFISA 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R++L+ + ITHAHEDH GA+ LW+ L PVY + F +L K + K+P Sbjct: 75 RRESLVGMVITHAHEDHVGAVAYLWAELQCPVYCTSFTAVILRRKLAEAGLLSKVPLHVL 134 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G +G F + + + HS PE L+I + G ++HTGDWK D D +G D+++ Sbjct: 135 PTGASHRLGCFDLRWIGITHSTPEAQCLLIETSAGRVLHTGDWKWDADPQVGPSYDEEAF 194 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 ++ + AL+ DST A EG SE + I ++ +AKG V+ T F S+++R++++ Sbjct: 195 RSLAALKLDALVGDSTCATVEGRSPSEGDVVAGINQVVSDAKGRVVATCFGSNIARMQTL 254 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A GR + L G SL A++ G +D F+ G P E++++IATGSQG Sbjct: 255 ARAAADNGRYLALFGRSLVNNYQAALETGFWDRDLTFIDPTHIGYLPPEEVMIIATGSQG 314 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + R+AL +++ G +++L DTV+FSSR IPGNE+AI ++ LV + V+++ + Sbjct: 315 DARAALTRIAAGNHPDLELEAGDTVVFSSRDIPGNELAIERVRQALVSKDVKIVEQTEHG 374 Query: 364 P-VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P +H SGHP +DLK MY+W+ P++ + +HGEP HL AH LA G+ RNG + Sbjct: 375 PLIHTSGHPGRDDLKDMYEWVAPRIAIPVHGEPHHLAAHASLAADCGVPQQLLGRNGDLF 434 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFL 446 L P P V G Sbjct: 435 VLAPQPGVRPGAVAVGRRTIRQSG 458 >gi|313673369|ref|YP_004051480.1| beta-lactamase domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940125|gb|ADR19317.1| beta-lactamase domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 534 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 148/546 (27%), Positives = 264/546 (48%), Gaps = 25/546 (4%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGGVGEIG N LY + I++DCG+ F + + G+D PD + Sbjct: 1 MKFSVTFLGGVGEIGGNCYLYE----TENSAIIVDCGLKFFQSEFIGIDFTIPDFKHLES 56 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R+ L + ITH HEDH GAL F +P+YA +AI L++ K + K Sbjct: 57 VREKLKGVIITHGHEDHIGALPYFLKFFPLPIYAGSYAIRLIKHKIAQSKYRPKSFNTV- 115 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G+ + +G F I + VNHSIP++ L++ +H GD++++ + ++G + L Sbjct: 116 ADGETIVLGDFQINFLEVNHSIPDSFFLIMDVDNKRYIHCGDFRVEKNPLIGKPFPFELL 175 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + AL D TN T E + + DI KN+KG V TTFS+++SRI+ + Sbjct: 176 EKY-KGNVEALFIDCTNVFNTSTEEDESNLLEKFVDIFKNSKGRVFFTTFSTNISRIKLV 234 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES-FGLYPREQLIVIATGSQ 302 I+ + GRK+++ G++ + ++++ ++ ++ + + Y EQL ++ TG Q Sbjct: 235 IEACKITGRKLLVEGNAFSKNINISRELSYLQIPENLIIPLEKIDYYEPEQLCILITGCQ 294 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GEP S+L +++ E + +K++ DT +FSS IPGNE + + N + +VI Sbjct: 295 GEPNSSLFKVAMMERKKLKISPSDTFVFSSTIIPGNEKNLNRVINEIYLHNGKVIRG--- 351 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 VH+SGH N + + Q + P+ + IHGE H +++ ++ ++ V+NG + Sbjct: 352 --VHISGHATQNHILNVIQTVSPKWTIPIHGEIAHQRLLEKIIDEKKLSNPIFVKNGDKI 409 Query: 423 RLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGV 482 D I + G D ++ + +++ LS G + V + Sbjct: 410 TFSNDE-YWISPIPTGTIYIDQRGGFEYDEELFKEKKHLSRDGMIIVFYTKNR------- 461 Query: 483 PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVW 542 + G D ++ + + + ++ L + +D L+ +ISS +R KK + Sbjct: 462 VMLETFGFRLTD----ELDIKIKRYINDSMEKLKEITDEDFD-LKSTISSLVRRYFKKNF 516 Query: 543 GKKPLV 548 K+P+V Sbjct: 517 EKRPIV 522 >gi|92114196|ref|YP_574124.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] gi|91797286|gb|ABE59425.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] Length = 560 Score = 353 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 177/554 (31%), Positives = 275/554 (49%), Gaps = 25/554 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LPLGG GEIGMN LYG+ WI++DCG+ + DLP L P++ + + Sbjct: 16 LHMLPLGGCGEIGMNFTLYGH----QDHWIVVDCGMMI-RQDLPQAPLQVPNVDMLASQN 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 AI +TH HEDH GA+ LW PV+A+P A GLL + +++ Sbjct: 71 IVPRAIVVTHGHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQL-PTSAIQVITP 129 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 GD ++ G F I + + HSIPE+ AL++ +P I+HTGDWKLD + ++G A Sbjct: 130 GDAMESGPFDIRFLPLPHSIPESCALLLTTPQHRILHTGDWKLDPEPLIGKPASPQRFQA 189 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + + ++ DSTNA G SE + + + + G V+V+ F+S+++RI ++ Sbjct: 190 LAP--VDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLARILALGR 247 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A GR++ L+G S++R+V VA +G ++ + G P E+++VIATGSQGEP Sbjct: 248 AAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIATGSQGEP 307 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 R+AL++L++G + +L D+VIFS++AIPGNE+ I ++ L V + E + + Sbjct: 308 RAALSRLAQGRHADFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFDERSHPEL 367 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 H SGHP +L+R Y+W++P+ L+ +HGE H AH+ LA GI RNG MLRL Sbjct: 368 HASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQQAHRALAESLGIEVPWIPRNGDMLRLD 427 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK-----RRQLSFVGHLSVNVLLDNHYNIF 480 + + + I L + RR G LS+ + + Sbjct: 428 AEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRR----SGILSLTLPVVRQST-- 481 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD-LKLLRESISSALRSLLK 539 G I G +D + + V + D + LR+ + L L Sbjct: 482 GWVRI---GRLLWDTSHDLPLDDV--ALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLG 536 Query: 540 KVWGKKPLVTVFIN 553 P V + I Sbjct: 537 DHLRHLPDVHLHIM 550 >gi|145350454|ref|XP_001419620.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579852|gb|ABO97913.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 413 Score = 353 bits (906), Expect = 5e-95, Method: Composition-based stats. Identities = 139/413 (33%), Positives = 227/413 (54%), Gaps = 8/413 (1%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LPLGG+GEIGMN L G G +++++D G+ FP + G+ V PD++F+ + + Sbjct: 6 LKILPLGGLGEIGMNCMLVGSG----DRYVLLDAGLMFPDHEELGIQKVLPDVSFLARWK 61 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YA F + L++ + + F Sbjct: 62 DKIEAVLITHGHEDHIGALPWVVPALDPSTPIYAGLFTMQLIKRRMQEYSLWNDQRFKVF 121 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++ G F +E+VRV HSIP+ L+ RS G IVHTGDWK+D++ + G + D+ S Sbjct: 122 DMNERFQAGPFEMEAVRVTHSIPDCCGLIFRSEHGTIVHTGDWKIDENPVDGRIFDRTSW 181 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 +GNEG+ +M DSTN + G ISE + + I + +G ++ T F+S++ R+ + Sbjct: 182 ERVGNEGVTLMMSDSTNVLSPGRTISESAVSEGIMRRVLGHRGRIITTQFASNIHRLYGV 241 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQ 302 AE GR+I LG SL + A GI + + + +L+++ TGSQ Sbjct: 242 RAAAEATGRQIAFLGMSLTTYLEAAKRAGIAPIDPEKLIPADEIDNCDPSKLLIVTTGSQ 301 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE R+ LA + G R + L +D +++S++ IPGNE + + N + ++G + + Sbjct: 302 GEERAQLALAAHGSSRLLTLQPEDLLLYSAKMIPGNEKRVMRMMNEIAKRGPEIAMGRED 361 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 C +H SGH Y ++L + + ++P+ + +HGE L AH++LA Q G+ Sbjct: 362 C-LHSSGHGYKDELDEVIKLLKPEHFLPVHGEYAFLRAHEQLARQSGVRHTTV 413 >gi|307545565|ref|YP_003898044.1| ribonuclease J [Halomonas elongata DSM 2581] gi|307217589|emb|CBV42859.1| K07021 [Halomonas elongata DSM 2581] Length = 556 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 181/562 (32%), Positives = 283/562 (50%), Gaps = 35/562 (6%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LPLGG GEIGMN+ LY + +WI +DCG+ + DLPG L PD+T + Sbjct: 16 LHLLPLGGCGEIGMNLTLYEH----RDRWIAVDCGMMI-RQDLPGSPLQVPDLTPLETLG 70 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 A+ ITH HEDH GA LW P++A+P A GLL +K + + Sbjct: 71 IAPEALVITHGHEDHIGAAAWLWPQWGCPIHATPLAAGLLRSKFAERGLRTDA-IHVIEP 129 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G+ +++G F++ + + HSIPE+ AL+I++ I+HTGDWKLD +LG D D A Sbjct: 130 GEAIEIGHFALRYLPLTHSIPESCALLIQAGERRILHTGDWKLDPAPLLGAPIDADIYRA 189 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 I + ++ DST A G SE + + + + G V+V+ F+S++ R+ +I Sbjct: 190 IAP--VDLVVGDSTCAPEPGHSRSESEVANALEEAIAALSGRVVVSCFASNLDRVLAIGR 247 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 AE+ GR++ L+G S++R+V +A +G ++ + G P ++++VIATGSQGEP Sbjct: 248 AAERCGRRVSLMGRSMERMVRIAQGLGYLEDFPALVPVHDLGYLPPDEVLVIATGSQGEP 307 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 R+AL++L+ G + +L E D+VIFS+RAIPGNE I +K+ L GVR++ + + + Sbjct: 308 RAALSRLAAGRHPHFELMEGDSVIFSARAIPGNERLIERLKHALRLTGVRLLDDTHQPAL 367 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 H SGHPY ++L+ Y WI P L+ +HGE H AH+ LA + I RNG ++RL Sbjct: 368 HASGHPYQDELRTFYDWIAPCNLLPVHGEARHQQAHQALASEMSIEAPLTPRNGDLIRLD 427 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEI 485 + + + D I A G G + H +F + Sbjct: 428 DQGLHLQRHYRLTPRIIDQDKIAPVAGSG----------GESTA-----RHDQLFLAISV 472 Query: 486 VDIG--------IPAYDGDGGKIHK-LLLKTVITTVVDLPQFRRKDLKLLRESISSALRS 536 G + D + + L + + D+ L LRE++ + + Sbjct: 473 AASGWGWTRIGRLMLDDSHASPLDETELADRIDECLDDIQAD---SLAELREALYPDMMA 529 Query: 537 LLKKVWGKKPLVTVFINKISRQ 558 L + P V + I + Q Sbjct: 530 WLADHLHRVPEVHLQIFAVETQ 551 >gi|218281312|ref|ZP_03487800.1| hypothetical protein EUBIFOR_00365 [Eubacterium biforme DSM 3989] gi|218217497|gb|EEC91035.1| hypothetical protein EUBIFOR_00365 [Eubacterium biforme DSM 3989] Length = 563 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 125/564 (22%), Positives = 246/564 (43%), Gaps = 17/564 (3%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFI 61 E++ LGG+ E G N+ + +I+ G+ FP + + G++ + D T++ Sbjct: 10 TEKIRIFALGGLDEDGKNLFCVE----VDQSIYVIEAGIKFPDNKESLGIEFIIQDFTYL 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + + IFITH H+D GAL L + VY +P A+ ++ E ++ + Sbjct: 66 VENKNRVAGIFITHGHDDVMGALPYLLKQVPCDVYTAPLAVKEVQKMIRQEHITG-VRVH 124 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI-LGDVTDK 180 + +K +G + + H+ P T L I + G IV++G++ D D + D Sbjct: 125 GVKRNEKKRIGKRRVVFFPITHAYPGTFGLAIGTEQGYIVYSGEFIEDYDDLEDAYRADF 184 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSR 239 ++ +GNEG+L L+ +S A R G I + +++ + V V+ ++ SV R Sbjct: 185 TTISELGNEGVLVLLQESKGAERSGHTSPSHRISPKLLQVLETHENKRVFVSVYTQSVYR 244 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+ IID RK+V L+ +V ++G L + F + ++VI + Sbjct: 245 IQEIIDCCVANHRKMVFYTKELRDLVDRLKEIGYEVDPSLVIDPADFDN-SMKDVVVIIS 303 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G + ++ E+ ++ + D ++ +S +PG E ++N + ++ +I Sbjct: 304 GQGKSLFKTINNIANNELESIVFDQDDVIVVASPVVPGVENEFKSMENDMYKKEGEIIVL 363 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVR 417 D +S HP DLK M +P+ + I GE L + ++A++ G + + Sbjct: 364 DKN---VLSMHPSKEDLKMMIFLTKPKYYIPIKGEYRLLHMNSQIAVEMGYDPSRIIILD 420 Query: 418 NGKMLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 NG++ + E+ + DG A + + R LS G + + + ++ Sbjct: 421 NGQVATFENRKLVSCAMELELHETMIDGKENWDMAGVVLKDRETLSTDGVMILAIGINAK 480 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I P++ G+ Y D I + K + T+ + + + D R I + Sbjct: 481 TKKIINGPDVQSRGL-IYLRDAEYITGDVAKIMEDTINEAVENKTYDNLETRNLIRDKVS 539 Query: 536 SLLKKVWGKKPLVTVFINKISRQR 559 L K K+P++ I +I+ + Sbjct: 540 KYLYKQTAKRPMILPVILEINLNK 563 >gi|50252673|dbj|BAD28842.1| putative metallo beta subunit lactamase [Oryza sativa Japonica Group] Length = 506 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 152/424 (35%), Positives = 227/424 (53%), Gaps = 19/424 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID GV FP D GV + PD TFI K Sbjct: 81 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWS 136 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + F Sbjct: 137 HKIEAVIITHGHEDHIGALPWVIPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRLKVF 196 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + G F +E +RV HSIP+ LV+R G I HTGDWK+D+ + G + D+ +L Sbjct: 197 RVRKRFQAGPFEVEPLRVTHSIPDCCGLVLRCADGIIFHTGDWKIDESPVDGKIFDRQAL 256 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISE + ++ + AKG V+ T F+S++ RI SI Sbjct: 257 EELSKEGVTLMMSDSTNVLSPGRSISESVVAGSLLRHISEAKGRVITTQFASNIHRIGSI 316 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ------------LFLSDESFGLYPR 291 A+ GRK+V +G SL+ + A G D L + E Y Sbjct: 317 KAAADLTGRKLVFVGMSLRTYLDAAFRDGKSPIDPSTLVHLIESRFLLKVKVEDMDAYAP 376 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 L+V+ TGSQ EPR+AL S G +KL+++D +++S++ IPGNE + + NRL E Sbjct: 377 NDLLVVTTGSQAEPRAALNLASFGGSHALKLSKEDVLLYSAKVIPGNESRVMKMLNRLTE 436 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA 411 G +++ + +H SGH Y ++L+ + Q ++PQ + +HGE L L H+ L GI Sbjct: 437 LGPKIVMGK-DAGLHTSGHAYHDELEEVLQIVKPQHFLPVHGELLFLKEHELLGRSTGIR 495 Query: 412 CVPP 415 Sbjct: 496 HTTV 499 >gi|159467781|ref|XP_001692070.1| hypothetical protein CHLREDRAFT_115745 [Chlamydomonas reinhardtii] gi|158278797|gb|EDP04560.1| predicted protein [Chlamydomonas reinhardtii] Length = 415 Score = 348 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 141/407 (34%), Positives = 222/407 (54%), Gaps = 10/407 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G G ++++ID G+ FP G+ + PD F+ + + Sbjct: 4 LRILPIGGLGEIGMNCMLAGVG----DRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P+YAS F + L++ + + + I+F Sbjct: 60 DRIEALIITHGHEDHIGALPWVVPALDPATPIYASSFVMQLVKRRLTEYNLWDEKRFITF 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE VRV HSIP+ L++RS G IVHTGDWK+D++ + G+ D++ Sbjct: 120 DMRQRFQAGPFEIEPVRVTHSIPDCCGLIMRSDEGTIVHTGDWKIDENPLDGEQFDRELF 179 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIR 241 A+G+E + +M DSTN + G +SE+ + ++ + + N +G V+ T F+S++ R+ Sbjct: 180 MALGSEPVALMMSDSTNVLSPGRTLSEQVVHDSLVEKVLEHNGRGRVICTQFASNLHRLY 239 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATG 300 + A+ GRKI +G+SL + A G D L +++++ TG Sbjct: 240 GVKRAADAAGRKICFVGASLNHYLEAAWRDGRAPFDPKELMPTEQLRHANPNEVLIVTTG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ L+ +R + +K D +++S++ IPGNE + + N L QG RV Sbjct: 300 SQGEPRAQLSMAARDQSNILKTLPGDLLLYSAKVIPGNEGKVTKMLNALAGQGARVRQSR 359 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 A+ +H SGH Y +L + Q +RPQ + +HGE L H LA Sbjct: 360 AD-NLHTSGHAYQEELVELLQSVRPQHFLPVHGEYAFLTEHALLAKT 405 >gi|329896592|ref|ZP_08271623.1| Metallo-beta-lactamase family protein, RNA-specific [gamma proteobacterium IMCC3088] gi|328921699|gb|EGG29073.1| Metallo-beta-lactamase family protein, RNA-specific [gamma proteobacterium IMCC3088] Length = 454 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 240/428 (56%), Gaps = 7/428 (1%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDLVFPDIT 59 M + LVFLPLGG GEIGMN+ LYGY +W+M+DCG++F + + + D Sbjct: 1 MSDN-LVFLPLGGTGEIGMNLNLYGY----KGRWLMVDCGITFEQQHNSLRPSIQMADPQ 55 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 FI+ + L + ITHAHEDH GA+ LW+ L P+Y +PF +L K Sbjct: 56 FIVSRNQLLDGLIITHAHEDHIGAVPYLWAQLRCPIYTTPFTATVLRRKFASLDKPLPNE 115 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G F + +++ HS PET AL I++ +++HT DWK D ++G Sbjct: 116 LIEVPPDHIGRIGEFDVRWLQLTHSTPETCALHIQAGSYSVLHTADWKSDARPVVGTAWA 175 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 +S A+ + + A++CDSTNA + G +E + + + ++ G V+V F+S+++R Sbjct: 176 PNSWQALARQAVDAVVCDSTNATKPGRSATEGEVAEGLLRVISPLNGKVVVACFASNIAR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++S++ +A GR++ LLG SL+ + A+ +++ D + P +++ +AT Sbjct: 236 MQSVLQLAHATGRRVGLLGRSLENMYRNALANSLLQPDFRPIDPRHLEYLPAHEILALAT 295 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA- 358 GSQGE +AL +L R++ + E DTV+FS++ IPGNE A+ L +GV VI Sbjct: 296 GSQGEVGAALHKLGTDIHRHLSVGEGDTVVFSAKTIPGNEEAVARSIALLRGRGVTVIHA 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +++E +H SGHP +DL +Y+ +RP++ V +HGEP H+ A+ +A G+ +N Sbjct: 356 DESELLLHASGHPCADDLSDLYRVLRPKLAVPVHGEPEHMQANARIARAAGVQQALKGQN 415 Query: 419 GKMLRLFP 426 G + L P Sbjct: 416 GDLFYLAP 423 >gi|254515712|ref|ZP_05127772.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] gi|219675434|gb|EED31800.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] Length = 456 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 163/429 (37%), Positives = 249/429 (58%), Gaps = 10/429 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITF 60 ++L FLPLGG GEIGMN+ LYG+ W+M+DCG++F +D P V PD F Sbjct: 6 KDLWFLPLGGCGEIGMNLNLYGH----DGAWLMVDCGITFERDSTRIRPRVQT--PDPRF 59 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I++ + L I +THAHEDH GAL LW VPVY +PF +L K P Sbjct: 60 IVERKDALAGIVLTHAHEDHIGALPLLWERFPVPVYTTPFTAEVLRRKAAGRGGRVPSPL 119 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I G++ +G F + + + HS P+T AL IR G+++HT DWK+D +G Sbjct: 120 IECLPGEEQTIGPFDVRWLPITHSTPDTCALHIRCAAGSLLHTADWKIDAAPQVGPAFSS 179 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 A G+ + A++CDSTNA+ G +SE ++ + + +G V+V F+S+++R+ Sbjct: 180 ALFSAAGDSALDAVICDSTNAVVSGHSVSESAVRDGLLKAVAGCEGRVVVACFASNIARL 239 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 S+ +AE+ R + LLG SL+ + S A+ VG++++ + + G P+++++++ATG Sbjct: 240 HSLFYVAEKTRRYLGLLGRSLQTMHSAALSVGLLERSKRLIETGHLGYLPKDEVLIVATG 299 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI-AE 359 SQGE +AL +L+ G ++L DTVI SSR IPGNE ++ + R QG+++I A+ Sbjct: 300 SQGEHGAALQRLAAGSHPQLELESGDTVILSSRVIPGNEESVERLLQRFRAQGIQIIDAD 359 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 A PVH SGHP ++L MYQW RP++ V +HGE H+ A+ +A G A NG Sbjct: 360 SAAAPVHASGHPCADELASMYQWSRPRLAVPVHGEQRHMQANARIARANGAAMALTGSNG 419 Query: 420 KMLRLFPDP 428 + L P+P Sbjct: 420 DLFYLAPEP 428 >gi|228964695|ref|ZP_04125802.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794945|gb|EEM42444.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] Length = 357 Score = 346 bits (888), Expect = 5e-93, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 187/334 (55%), Gaps = 5/334 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+T++ Sbjct: 12 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ 67 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + I Sbjct: 68 ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQNDTELIV 127 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++D G+ + NHSIP+ + +V +P G +VHTGD+K D + D Sbjct: 128 IHSESEIDCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFKFDLTPVNNQHPDIHK 187 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 188 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 247 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 248 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEASEVNRLDPKQVAILCTGS 307 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 QGEP +ALA+L+ G R V + +DTVI ++ Sbjct: 308 QGEPMAALARLASGNYRQVDILPEDTVIIAATLS 341 >gi|9758283|dbj|BAB08807.1| unnamed protein product [Arabidopsis thaliana] Length = 528 Score = 346 bits (888), Expect = 5e-93, Method: Composition-based stats. Identities = 151/426 (35%), Positives = 230/426 (53%), Gaps = 10/426 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G + ++I+ID G+ FP D PG+ + PD FI + + Sbjct: 110 LRILPIGGLGEIGMNCMLVG----NYDRYILIDAGIMFPDYDEPGIQKIMPDTGFIRRWK 165 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L + P++AS F + L++ + + + +F Sbjct: 166 HKIEAVVITHGHEDHIGALPWVIPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTF 225 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G F IE + V HSIP+ L +R GNI+HTGDWK+D+ + G V D+++L Sbjct: 226 STRRRFMAGPFEIEPITVTHSIPDCSGLFLRCADGNILHTGDWKIDEAPLDGKVFDREAL 285 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + EG+ +M DSTN + G ISEK + + + AKG V+ T F+S++ R+ SI Sbjct: 286 EELSKEGVTLMMSDSTNVLSPGRTISEKVVADALVRNVMAAKGRVITTQFASNIHRLGSI 345 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQ 302 A+ GRK+V +G SL+ + A G D + E Y + L+++ TGSQ Sbjct: 346 KAAADITGRKLVFVGMSLRTYLEAAWRDGKAPIDPSSLIKVEDIEAYAPKDLLIVTTGSQ 405 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 EPR+AL S G KL ++D +++S++ IPGNE + + NR+ + G +I E Sbjct: 406 AEPRAALNLASYGSSHAFKLTKEDIILYSAKVIPGNESRVMKMMNRIADIGPNIIMGKNE 465 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +H SGH Y +L + + ++PQ + IHGE L L H+ L GI + K Sbjct: 466 M-LHTSGHAYRGEL--VLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVSLSPKTY 522 Query: 423 RLFPDP 428 L D Sbjct: 523 ELMVDK 528 >gi|302835740|ref|XP_002949431.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f. nagariensis] gi|300265258|gb|EFJ49450.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f. nagariensis] Length = 463 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 144/427 (33%), Positives = 227/427 (53%), Gaps = 11/427 (2%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LP+GG+GEIGMN L G ++++ID G+ FP G+ + PD F+ + + Sbjct: 32 LRILPIGGLGEIGMNCMLAG----VRDRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWK 87 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH HEDH GAL + L P++AS F + L++ + + + I F Sbjct: 88 DRIEALIITHGHEDHIGALPWVVPALDPGTPIFASSFVMELIKRRLTEYSLWDEKRFIKF 147 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 K G F IE VRV HSIP+ L++RS G +VHTGDWK+D+ + G+ D+ Sbjct: 148 DMRQKFQAGPFEIEPVRVTHSIPDCCGLIMRSSEGTLVHTGDWKIDEHPLDGEQFDRGLF 207 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSRIR 241 A+ +E + +M DSTN + G +SE+ + +I D + N KG V+ T F+S+V R+ Sbjct: 208 SALASERVALMMSDSTNVLSPGRTLSEQVVHDSIVDKVLQHNGKGRVICTQFASNVHRLY 267 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATG 300 + A+ GRK+ +G+SL + + G + + E Q++++ TG Sbjct: 268 GVKRAADASGRKVCFVGASLSLYLEASWRDGRAPFDPKELVQPEELRHMDPNQVLIVTTG 327 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SQGEPR+ L +R E R +K+ D V++S++ IPGNE + + N L QG RV Sbjct: 328 SQGEPRAQLCMAAREESRVLKIQPNDLVLYSAKVIPGNEGKVSKMLNALAAQGARVRQSR 387 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE-GIACVPPVRNG 419 + +H SGH Y ++L + Q +RPQ + +HGE L H LA ++ G+ V Sbjct: 388 GD-NLHTSGHAYQDELVEVLQSVRPQHFLPVHGEYAFLTEHALLAKEKAGVNFVEVCVCV 446 Query: 420 KMLRLFP 426 + + + Sbjct: 447 NICQTWG 453 >gi|119503446|ref|ZP_01625529.1| metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2080] gi|119460508|gb|EAW41600.1| metallo-beta-lactamase family protein [marine gamma proteobacterium HTCC2080] Length = 454 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 156/436 (35%), Positives = 240/436 (55%), Gaps = 8/436 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLV-FPDIT 59 + FLPLGG GEIGMN+ LYG+ + +W+++DCG++F D G + PD Sbjct: 5 DNATWFLPLGGTGEIGMNLNLYGH----NGRWLLVDCGITFEHDLGSTTGRPKIQMPDPA 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 FI + + + ITHAHEDH GA+ LW L PVY +PF +L K + P Sbjct: 61 FIAARKHLIDGLIITHAHEDHLGAVPYLWPMLDCPVYTTPFTASVLRKKSGWRGSVLPSP 120 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + D++ +GAF ++ + + HS PET AL+IR+ +++HT DWK+D ++G Sbjct: 121 LIEVRPSDRLQIGAFDVQWLPITHSTPETCALLIRTAGCSVLHTADWKIDKRPVVGPSWQ 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 EG+ A++CDSTNA++ G SE + + + G V+V F+S+V+R Sbjct: 181 VSDWAGKEFEGLNAVICDSTNALKAGRSPSEGDVADGLLQTLAPLTGKVVVACFASNVAR 240 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++S++ IA GR+ LLG SL+ + A+ + D +S E P +++ +AT Sbjct: 241 LQSVLRIAHATGRRAGLLGRSLENMYRCALANDYLHPDFRPISHEHLEYLPEYEVLALAT 300 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 GSQGE +AL +L+ ++ L E DTVIFS++ IPGNEVA+ + L + + VI Sbjct: 301 GSQGEVGAALHKLALDTHPHLSLGEGDTVIFSAKTIPGNEVAVARLVENLRARNIAVIHG 360 Query: 360 DAECP-VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 D +H SGHP ++L +YQ +RP +++ +HGE H+ A+ +LA G A RN Sbjct: 361 DNSQRTLHASGHPCQDELIDLYQSLRPDLVIPVHGEAEHMTANAKLAKANGAAAALTGRN 420 Query: 419 GKMLRLFPDPIEIIDE 434 G + L P P Sbjct: 421 GDLFHLAPVPGVKRQW 436 >gi|325973334|ref|YP_004250398.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis str. Illinois] gi|325989769|ref|YP_004249468.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis KI3806] gi|323574854|emb|CBZ40514.1| Metallo-beta-lactamase superfamily protein [Mycoplasma suis] gi|323651936|gb|ADX98018.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis str. Illinois] Length = 616 Score = 340 bits (871), Expect = 5e-91, Method: Composition-based stats. Identities = 143/567 (25%), Positives = 266/567 (46%), Gaps = 23/567 (4%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFIMKERK 66 F +GG+ EIG N + + +++D G+ F PGV P++ ++++ +K Sbjct: 24 FYSIGGIEEIGKNCYCVEHL----DEIVIMDFGIKFGNKLTQPGVTGEIPNLDYLIENQK 79 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH HEDH G + L + L +P +YA A+ L++ K ++ + + Sbjct: 80 KIFGLLITHGHEDHIGGVPHLVNSLDIPVIYAPALAMELIKKKLEENKIERLPKLEVYDP 139 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + F+ + VNHSIP++ I +P G +V +GD++ D + L + Sbjct: 140 DTIIFTKHFAFDVFPVNHSIPDSFGFAISTPNGVVVFSGDFRFDLKNKIDSKA-FQRLIS 198 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 IG + L+C+ST A + G SE I + + +I+ +++G +++T F+S++ RI I+ Sbjct: 199 IGGRQVDLLLCESTAAAQPGFNESEATIIQELKNIISSSEGRIIITFFASNLGRIEEIVK 258 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL---FLSDESFGLYPREQLIVIATGSQ 302 +A GRKI++ G S++ + + VGI+ ++L F+ P +++++I TGSQ Sbjct: 259 LASSAGRKIIVFGRSIESSLKCSQAVGILNSNELKNVFIPSSEINTVPDKKILIICTGSQ 318 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE SAL +S+G ++L D +IFSS IPGN+ A+ + NRL + G R+ E Sbjct: 319 GEESSALNNISKGLHPIIQLKPSDDIIFSSNVIPGNKQAVNELVNRLYKSGCRLFLNSNE 378 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI---ACVPPVRNG 419 C +H SGH + + I P L +HGE L K + I + ++NG Sbjct: 379 CKIHASGHATKLEQQLFISLIAPSFLAPVHGEKKMLHDLKRNISELKIVPSENIFILKNG 438 Query: 420 KMLRLFPDPIEIIDEVVHG----LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + L++F + + H + + + R +L+ G L+V++ +D Sbjct: 439 EKLKIFNRKVTKAEPEEHLQFKFPYYVMENKLTDHGRETLGARTKLATNGLLTVSMTVDL 498 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKL---LLKTVITTVVDLPQFRRKDLKLLRESIS 531 + +F + + IG ++ + L + K + K+ + S S Sbjct: 499 STKKLFSISPVTTIGSLSFSLSAEILRDLGRMISKNTEELFNNSKGGLSKED--IISSNS 556 Query: 532 SALRSLLKKVWGKKPLVTVFINKISRQ 558 + K K P + + + + + Sbjct: 557 KIITDFFNKKGHKIPQILILLEETNSN 583 >gi|332992689|gb|AEF02744.1| metallo-beta-lactamase family protein [Alteromonas sp. SN2] Length = 435 Score = 339 bits (869), Expect = 9e-91, Method: Composition-based stats. Identities = 158/439 (35%), Positives = 249/439 (56%), Gaps = 16/439 (3%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----GVD------LVFPDITFIMKERKN 67 MN+ LYG+ KW+M+DCGVSF + +P G + +V PD TFI +++N Sbjct: 1 MNLNLYGH----DGKWLMVDCGVSFDEPLIPPYRYSGTNKQTHHRVVAPDPTFIAAQKEN 56 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + I ITHAHEDH GAL LW+ P+Y + F +L K ++ K+P + + Sbjct: 57 IAGIVITHAHEDHVGALPYLWARFQCPIYTTSFTAEVLRRKLAQTKLINKVPIVEIASEQ 116 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + +G F + + V HS+PE AL I + G ++HT DWK+D I G D ++ A+G Sbjct: 117 TLTLGPFDVSWLSVTHSLPEPYALKIATSAGTVLHTADWKIDAQPITGKPFDSNTYRALG 176 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 E ILA++ DSTNA + G ISE+ + +K +G V+VT F S+++R+ ++ +A Sbjct: 177 EENILAMVGDSTNATKPGFSISERNCYDGLLSTIKPLQGRVVVTCFGSNIARLITLARVA 236 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 ++ GR I L G SL + S+A GI D G P +++ +ATGSQGE + Sbjct: 237 QKTGRYIALYGRSLINMYSIARQQGIWPVDLPVADAFHLGYLPPNEVLAVATGSQGEKNT 296 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV-IAEDAECPVH 366 AL++++ +++L + DTVI+S+ AIPGNE +I + + L +GV+V ++ED++ P+H Sbjct: 297 ALSRMANDSHPHLQLDKGDTVIYSAIAIPGNEDSIKRVNSVLSARGVKVIMSEDSQLPIH 356 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 SGHP +LK MY W++P++ + +HGE +HL AH +A + G+ +NG + RL P Sbjct: 357 ASGHPCAEELKLMYHWVKPKIAIPVHGEEVHLKAHAMIAKECGVKKHYVGQNGDLYRLAP 416 Query: 427 DPIEIIDEVVHGLFLKDGF 445 P + G Sbjct: 417 QPSIRRQVINTGRVPVQQD 435 >gi|254283945|ref|ZP_04958913.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] gi|219680148|gb|EED36497.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] Length = 458 Score = 338 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 151/453 (33%), Positives = 241/453 (53%), Gaps = 11/453 (2%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDL-PGVDLVFPDITFIMK 63 F+PLGG GEIGMN+ L+G+ W+M+DCG++F P+ + PD FI Sbjct: 9 WFVPLGGCGEIGMNLNLFGHA----GSWLMVDCGITFERPEGSAALRPSIQMPDPRFIAS 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCIS 122 R+ L + +THAHEDH GA+ LW L P+YA+PF +L K + I Sbjct: 65 RRQRLAGLVLTHAHEDHLGAVPYLWRELRCPIYATPFTASVLREKNRSRGDTDITGALIE 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + GD +G FS+E + + HS PET AL I +P I+HT DWKLD D ++G + Sbjct: 125 VRPGDTHQIGPFSVEWMPITHSTPETCALGITTPTCRILHTADWKLDTDPVVGAPFREAP 184 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G+ A++CDSTNA++ G +E+ + + + + +G V++ F+S+V+R++S Sbjct: 185 FRCFAERGVDAVICDSTNALKPGRSPTERAVADGLLETVAPLQGRVVIACFASNVARMQS 244 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 ++ +A R++ LLG SL + A ++ ++ E G P +++ +ATGSQ Sbjct: 245 VLRLAHATQRRVGLLGRSLHTMFRCARASHLLDPRLQPIAAEHLGYLPEREVLALATGSQ 304 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 GE +AL +L ++ LA DTVI SS IPGNE+A+ + L +G+ V+ DA Sbjct: 305 GEVGAALHRLMMDSHPHLSLAAGDTVILSSTTIPGNEMAVNRLVEGLTARGISVVQADAA 364 Query: 363 CP-VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H SGHP ++LK ++ + P ++V +HGE H+VA+ +A G NG + Sbjct: 365 PRVLHASGHPCEDELKDLFTLLSPHLVVPVHGEREHMVANARIARAAGARLALTGANGDL 424 Query: 422 LRLFPDPI--EIIDEVVHGLFLKDGFLIGKFAD 452 L P+P +V + ++ + Sbjct: 425 FYLSPNPGVRRQAADVGRLEWCEENRSLIPVTG 457 >gi|161899375|ref|XP_001712914.1| regulator of transcription that contains myb domains [Bigelowiella natans] gi|75756408|gb|ABA27302.1| regulator of transcription that contains myb domains [Bigelowiella natans] Length = 636 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 170/574 (29%), Positives = 287/574 (50%), Gaps = 31/574 (5%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++++ +PLGG+GEIGMN L G S +++I+IDCG+ F G+ V PDI F+ Sbjct: 70 DKDIIVVPLGGLGEIGMNCMLIG----SKKRFILIDCGIMFTDLSHLGIQKVIPDINFLT 125 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + ITH HEDH GA++ + VY S F ++ + + K Sbjct: 126 HIQNLIEGLIITHGHEDHIGAINWVLPILRTDALVYTSRFVYNIISKRIDKQNYLFKKLF 185 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F + +G F E+ RV HSIP+ VIRS G IVHTGDWK+D+ + G+ D+ Sbjct: 186 RIFDLKKRFQLGPFECEAFRVTHSIPDCCGFVIRSKYGLIVHTGDWKIDEFPLDGEKFDR 245 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN--AKGCVLVTTFSSSVS 238 + L +I E +L +M DSTN++ G SEK ++ ++ I+ N KG ++ T F+S+V Sbjct: 246 EFLESISKEKVLLMMSDSTNSLSHGRTASEKVVQDSLVSIITNPKIKGRIITTQFASNVF 305 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVI 297 R+ SI A+ +KI LG+SL + ++ G + + +++I++ Sbjct: 306 RLYSIKKAADISKKKICFLGTSLNSYLDASLLDGRAPFHPSELVQESELKNIDPDKIIIV 365 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TGSQGE RS L S + L DT+I+S++ IPGN+ + + NR+ G ++I Sbjct: 366 TTGSQGEARSTLNLSSLDLSPRLSLNPYDTIIYSAKIIPGNDKKVVRMLNRISSHGCKII 425 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ-EGIACVPPV 416 + + +H SGH Y ++LK + + ++P + +HGE + L H +ALQ GI + Sbjct: 426 YGN-QAKIHTSGHAYEDELKEILKIVKPSYFLPVHGELISLNVHSSIALQNCGIKNTIVM 484 Query: 417 RNGKMLRLFPDP--------IEIIDEVVHGLFLKDGFLI-GKFADLGIAKRRQLSFVGHL 467 RNG++L L D + E+ G I G +AD+GI+ + ++S G + Sbjct: 485 RNGQVLSLESDNQNPLGFKLFNLSGEINLVNHYNTGSSILGSYADIGISDKIKISNEGII 544 Query: 468 SVNVLL------DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRK 521 +++ D + + I GI D GK++ ++ K + + Sbjct: 545 LISLEFVRIKESDTYVSFKSKLRISSRGIWI---DRGKLNFIIKKLLFNILNKC--RTNI 599 Query: 522 DLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + L + IS + K+ P + V+ N++ Sbjct: 600 SIISLEQIISETMNYSCYKINRSNPEIIVYANEL 633 >gi|301055288|ref|YP_003793499.1| N-terminla part of metallo-beta-lactamase family protein [Bacillus anthracis CI] gi|300377457|gb|ADK06361.1| N-terminla part of metallo-beta-lactamase family protein [Bacillus cereus biovar anthracis str. CI] Length = 317 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 106/318 (33%), Positives = 183/318 (57%), Gaps = 8/318 (2%) Query: 1 MK---NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 MK NE + LGGVGEIG NM + ++D G+ FP D++ G+D+V PD Sbjct: 1 MKRKENESVKVFALGGVGEIGKNMYCVEI----DSEIFIVDAGLMFPGDEMFGIDIVIPD 56 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 IT++++ ++ + +FITH HEDH G + + L +PVYA+ +GL++ K + + Sbjct: 57 ITYLVENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGR 116 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V+ ++ HSIP+++ + + G IV+TGD+K D I Sbjct: 117 VDLKTIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSG 176 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + IGNEG+L L+ DSTNA R G SEK + I + A+G ++V +F+S+V Sbjct: 177 ADLGKMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNV 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIV 296 RI+ + D A + GRK+ ++G S+ +VV +A +G + + + +S + +P +++ + Sbjct: 237 HRIQQVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAI 296 Query: 297 IATGSQGEPRSALAQLSR 314 + TGSQGEP +AL+++++ Sbjct: 297 LTTGSQGEPMAALSRMAK 314 >gi|256383807|gb|ACU78377.1| hydrolase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384637|gb|ACU79206.1| hydrolase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455539|gb|ADH21774.1| hydrolase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 583 Score = 332 bits (851), Expect = 1e-88, Method: Composition-based stats. Identities = 124/560 (22%), Positives = 246/560 (43%), Gaps = 18/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N+ + + ++D GV +P+ D+ G+D V P +I + Sbjct: 3 DIKFTALGGQDERGKNLYVLEI----DNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 +K + IF+T+ + GA+ L + P+Y + + + K R+ K Sbjct: 59 KKKIKGIFLTNPSAYNMGAVPYLLKEIEAPIYCNEITELIAKIKFQKLRLKNKDHILKVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D + +G +E R S P++ V + +G+IV+ GD+ +D TD L Sbjct: 119 HDKDILKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 I G+LAL+ D+ A R+ + I K I K K ++V F + ++ I Sbjct: 179 SQIAKNGVLALISDAEFASRKDFTVPNHKIDKYILAPFKEKKTKIIVAIFEEDIHKLSQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A++ RKI + G ++ V+ + + L + ++I +G+ Sbjct: 239 CMAAKENNRKIAVYGRTMDAVLRSNLIHENLVIKPEDLMSIQ-EYVNSDNGVLIISGTGD 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + S LA+++ V+ EKD +I ++ + G E I + L R++A + Sbjct: 298 DLYSKLAKIATSNDSLVEFTEKDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKN 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 S D+K + + P+ + + + ++ A++ G+ + + NG++ Sbjct: 358 IW--SMRASYEDIKMLTSILNPKYFIPVKALYKDFLNAEKAAIEAGVNNQNIGIIDNGEI 415 Query: 422 LRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L+L + HG DG IG + + +R+QL+ G + V +D + + Sbjct: 416 LKLSKNHLAISEHSAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKEL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-----PQFRRKDLKLLRESISSAL 534 + + G+ Y + I K+L + + +++ + ++ DL +++ I+S + Sbjct: 476 ISLIDTQMRGVL-YIQEDNPIFKILQREITNLILEGQALYKKEPKKYDLNEIKKDITSKI 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + L+K+ GK P+V V IN+ Sbjct: 535 KQLIKQESGKTPIVLVIINE 554 >gi|331703261|ref|YP_004399948.1| hypothetical protein MLC_2410 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801816|emb|CBW53969.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 583 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 123/560 (21%), Positives = 245/560 (43%), Gaps = 18/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N+ + + ++D GV +P+ D+ G+D V P +I + Sbjct: 3 DIKFTALGGQDERGKNLYVLEI----DNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 +K + IF+T+ + GA+ L + P+Y + + + K R+ K Sbjct: 59 KKKIKGIFLTNPSAYNMGAVPYLLKEIEAPIYCNEITELIAKIKFQKLRLKNKDHILKVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D + +G +E R S P++ V + +G+IV+ GD+ +D TD L Sbjct: 119 HDKDILKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 I G+LAL+ D+ A R+ + I K I K K ++V F + ++ I Sbjct: 179 SQIAKNGVLALISDAEFASRKDFTVPNHKIDKYILAPFKEKKTKIIVAIFEEDIHKLSQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A++ RKI + G ++ V+ + + L + ++I +G+ Sbjct: 239 CMAAKENNRKIAVYGRTMDAVLRSNLIHEDLVIKPEDLMSIQ-EYVNSDNGVLIISGTGD 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + S LA+++ V+ E D +I ++ + G E I + L R++A + Sbjct: 298 DLYSKLAKIATSNDSLVEFTENDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKN 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 S D+K + + P+ + + + ++ A++ G+ + + NG++ Sbjct: 358 IW--SMRASYEDIKMLTSILNPKYFIPVKALYKDFLNAEKAAIEAGVNNQNIGIIDNGEI 415 Query: 422 LRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L+L + HG DG IG + + +R+QL+ G + V +D + + Sbjct: 416 LKLSKNHLAISEHSAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKEL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-----PQFRRKDLKLLRESISSAL 534 + + G+ Y + I K+L + + +++ + ++ DL +++ I+S + Sbjct: 476 ISLIDTQMRGVL-YIQEDNPIFKILQREITNLILEGQALYKKEPKKYDLNEIKKDITSKI 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + L+K+ GK P+V V IN+ Sbjct: 535 KQLIKQESGKTPIVLVIINE 554 >gi|42560848|ref|NP_975299.1| hypothetical protein MSC_0300 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492344|emb|CAE76941.1| CONSERVED HYPOTEHTICAL PROTEIN [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320416|gb|ADK69059.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 583 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 124/560 (22%), Positives = 246/560 (43%), Gaps = 18/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N+ + + ++D GV +P+ D+ G+D V P +I + Sbjct: 3 DIKFTALGGQDERGKNLYVLEI----DNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 +K + IF+T+ + GA+ L + P+Y + + + K R+ K Sbjct: 59 KKKIKGIFLTNPSAYNMGAVPYLLKEIKAPIYCNEITELIAKIKFQKLRLKNKDHILKVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D + +G +E R S P++ V + +G+IV+ GD+ +D TD L Sbjct: 119 HDKDVLKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 I G+LAL+ D+ A R+ + I K I K K ++V F + ++ I Sbjct: 179 SQIAKNGVLALISDAEFASRKDFTVPNHKIDKYILVPFKEKKTKIIVAIFEEDIHKLSQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A++ RKI + G ++ V+ + + L + ++I +G+ Sbjct: 239 CMAAKENNRKIAVYGRTMDAVLRSNLIHEDLVIKPEDLMSIQ-EYVNSDNGVLIISGTGD 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + S LA+++ V+ EKD +I ++ + G E I + L R++A + Sbjct: 298 DLYSKLAKIATSNDSLVEFTEKDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKN 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 S D+K + + P+ + + + ++ A++ G+ + + NG++ Sbjct: 358 IW--SMRASYEDIKMLTSILNPKYFIPVKALYKDFLNAEKAAIEAGVNNQNIGIIDNGEI 415 Query: 422 LRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L+L + HG DG IG + + +R+QL+ G + V +D + + Sbjct: 416 LKLSKNHLAISEHSAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKEL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-----PQFRRKDLKLLRESISSAL 534 + + G+ Y + I K+L + + +++ + ++ DL +++ I+S + Sbjct: 476 ISLIDTQMRGVL-YIQEDNPIFKILQREITNLILEGQALYKKEPKKYDLNEIKKDITSKI 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + L+K+ GK P+V V IN+ Sbjct: 535 KQLIKQESGKTPIVLVIINE 554 >gi|83319270|ref|YP_424241.1| hypothetical protein MCAP_0255 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283156|gb|ABC01088.1| conserved hypothetical protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 583 Score = 329 bits (843), Expect = 8e-88, Method: Composition-based stats. Identities = 125/560 (22%), Positives = 242/560 (43%), Gaps = 18/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N+ + + ++D GV +P+ D+ G+D V P +I + Sbjct: 3 DIKFTALGGQDERGKNLYVLEI----DNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 +K + IF+T+ + GA+ L + P+Y + + K RV K Sbjct: 59 KKKIKGIFLTNPSAYNMGAIPYLLKEIEAPIYCNEITELIARIKFQKLRVKNKDHILKVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D + +G +E R S P++ V + +G+IV+ GD+ +D TD L Sbjct: 119 HDKDILKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 I G+LAL+ D+ A R+ + I K I K ++V F + ++ I Sbjct: 179 SQIAKRGVLALISDAEFASRKDFTVPNHKIDKYILAPFKEKNTKIIVAIFEEDIHKLGQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A++ RKI + G ++ V+ + + L ++I +G+ Sbjct: 239 CMAAKENNRKIAVYGRTMDAVLRSNLIHENLVIKPEDLISIQ-EYVNSNNGVLIISGTGD 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + S LA+++ V+ EKD +I ++ + G E I + L R++A + Sbjct: 298 DLYSKLAKIATSNDSLVEFTEKDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKN 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 S D+K + + P+ + I + ++ A++ G+ + + NG++ Sbjct: 358 IW--SMRASYEDIKMLTSILNPKYFIPIKALYKDFLNAEKAAIEAGVNNQNIGIIDNGEI 415 Query: 422 LRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L+L + HG DG IG + + +R+QL+ G + V +D + + Sbjct: 416 LKLSKNHLAISEHGAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKEL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-----PQFRRKDLKLLRESISSAL 534 + + G+ Y + I K+L + + +++ ++ DL +++ I+S + Sbjct: 476 ISLIDTQMRGVL-YIQEDNPIFKILQREITNLIIEGQALYKKDPKKYDLNEIKKDITSRI 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + L+K+ GK P+V V IN+ Sbjct: 535 KQLIKQESGKTPIVLVIINE 554 >gi|34849379|gb|AAP58878.1| hydrolase [Spiroplasma kunkelii CR2-3x] Length = 555 Score = 329 bits (843), Expect = 8e-88, Method: Composition-based stats. Identities = 117/560 (20%), Positives = 229/560 (40%), Gaps = 16/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG+ E G N+ + + D G P+ + G+D+V P+ ++ + Sbjct: 3 KINFFALGGLDERGKNLYCIE----VEQDIFIFDAGTKNPERGILGIDVVIPNFDYLKEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 R + +FIT + AL + L PVY S +L+ +V K C Sbjct: 59 RTRIKGVFITKPSYECSEALTYILKELAFPVYGSDLTCNILKFHLQRFKVRGKEECFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A D +D G +E ++P + + +P G I++TGD+ D A TD L Sbjct: 119 NAKDILDFGLCKVEVFSTTTNMPNSFGFALHTPDGTIIYTGDYIFDAKADPNFATDLQHL 178 Query: 184 CA-IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 I +L + ++++A R IK I +K + +++ F + +I Sbjct: 179 NQIIAKNKVLLFLSEASSASRRDYTAPNHKIKNYIERAVKETEDRIILACFDQDLHKISE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + D+ + + + G +L + V D + + + L E+ ++I TGS Sbjct: 239 LFDLVRENNISVGIYGQTLLESLKVLSDSKKLNFNGINLKGLQEA-VKEEKSLIIVTGSG 297 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 S L +++ G + + E DT+I ++ PG+E+ ++ + L + Sbjct: 298 ERLYSRLIKIASGNDDILDIKESDTIILATPPNPGSELNHANVLDELARTVAK--TIALS 355 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 + D+K M I P+ V + G V K A++ GI + V NG+ Sbjct: 356 DKKVWTMTASYEDVKLMSSIINPKYFVPVKGLYKDFVQAKMAAIEAGINPEHIFIVDNGE 415 Query: 421 MLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 L + ++V DG +G + + +R+QL+ G + + V +D+ Sbjct: 416 GLEFIDGEYTKKSNKVKTADLYVDGIGVGDIGAVVLNERKQLATDGVVIIGVSIDSKTKE 475 Query: 479 IFGVPEIVDIGIPAYDGDGG---KIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + + + G+ + K+ K++++ + D+ ++ I S + Sbjct: 476 LVSLIDTQMRGVIYIQENNDIFRKMQKVIIEIIEKHYKKAVVGEMYDVNEVKNEIRSTIS 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S +K GK P++ +N+I Sbjct: 536 SFVKTETGKTPIILAIVNEI 555 >gi|309799913|ref|ZP_07694117.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] gi|308116440|gb|EFO53912.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] Length = 437 Score = 328 bits (842), Expect = 1e-87, Method: Composition-based stats. Identities = 123/415 (29%), Positives = 202/415 (48%), Gaps = 9/415 (2%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGGV E G NM + + ++D G+ +P+++ GVD+V P++ ++ + Sbjct: 2 NTIKLTTLGGVRENGKNMYIAEI----NDSIFVLDAGLKYPENEQLGVDVVIPNMDYLFE 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + +F+TH H D GAL L + VPV+ S I L + + V K Sbjct: 58 NSDRIAGVFLTHGHADAIGALPYLLTEAKVPVFGSELTIELAKLFVKGNDSVKKFDDFHV 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++D G + R HSIPE++ +V+++ GNIV+TGD+K D A TD Sbjct: 118 IDENTEIDFGGTIVSFFRTTHSIPESLGVVLKTSEGNIVYTGDFKFDQTASESYATDFGR 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L IG EG+LAL+ DS NA SE + I + + G ++V +S++SRI+ Sbjct: 178 LAEIGREGVLALLSDSANADSNIQVASENEVGVEITQTISDWDGRIIVAAVASNLSRIQQ 237 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIATG 300 + D A + GR++VL G ++ +V AI + + + L + + + +LI++ TG Sbjct: 238 VFDAAAETGRRVVLTGFDIENIVRTAIRLKKLSLASENLLIKPKDMSRFEDHELIILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 GEP + L ++S G R V++ E D V + E + ++N + + G V Sbjct: 298 RMGEPINGLRKMSIGRHRYVEIKEGDLVYIVTTPSIAKEAVMARVENMVYQAGGVVK--P 355 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + VSGH DL+ M ++PQ L I GE L AH + A+ G+ Sbjct: 356 ITHSLRVSGHGNARDLQLMINLLQPQYLFPIQGEYRELDAHAKAAMAVGMLPERI 410 >gi|50364907|ref|YP_053332.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] gi|50363463|gb|AAT75448.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] Length = 584 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 116/561 (20%), Positives = 246/561 (43%), Gaps = 19/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F+ LGG E G N+ + ++D GV +P + GVD+V P + ++ Sbjct: 3 KIKFMALGGQDERGKNLFVL----DIDDNLFILDAGVKYPDKGILGVDIVTPKLDYLKNN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS--KKIPCIS 122 ++ + IF+T++ + G++ + + VPVY + + + K R+ K + Sbjct: 59 KQKIKGIFLTNSASYNMGSVPYILKTMDVPVYCNEITQLVGKIKISRMRIKNTKDQNFVV 118 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +D G +E R + P++ + G IV+ GD+ +D TD + Sbjct: 119 VKDKQILDFGKVKVEVFRTTSASPQSYGYAFHTEEGTIVYAGDYIIDGKEQSYFSTDFNH 178 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG +G+LAL+ DS A R G + I+ I K K + + F + ++ Sbjct: 179 ISEIGKKGVLALIADSEYASRSGFTVPNHKIENFISTSFKEKKTKIAIGIFEEDIFKLGE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I A++ RKI + G ++ ++ + ++ + E ++I +G+ Sbjct: 239 ICMAAKENNRKIAVYGRTMTEILKSNLINENLQIVPEDIITVD-EYMKSENGLLIISGTG 297 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 S LA+++ G V+ EKD +I ++ PG E I + L R++A Sbjct: 298 DVLYSKLAKIATGNDEVVEFTEKDLIILATPPAPGVEKRHAQILDELARTDARLLALSDR 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 S H D+K + P+ + + + ++ A++ G+ + + NG+ Sbjct: 358 NIW--SMHASYEDIKVFTSILNPKYFIPVKSLFKDSLKAEKAAIEAGVNERNIVILDNGQ 415 Query: 421 MLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 + + + I I D ++ G D +G + + +R+ L+ G + + +D + Sbjct: 416 VANISKNSISISDKKIDIGNSYVDQAGVGDVGAIVLNERKLLATDGVMIIGATIDSRNKE 475 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF-----RRKDLKLLRESISSA 533 + + + G+ Y + I K++ K + + + + D+ +++ I++ Sbjct: 476 LISMIDTQMRGVL-YIKEENPIFKIIQKEIESLLEQGQSQFKENPSKYDVNEVKKDIATR 534 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 +R+L+K+ GK+P+V V +N+ Sbjct: 535 VRTLIKQESGKQPIVLVIVNE 555 >gi|313665192|ref|YP_004047063.1| hypothetical protein MSB_A0306 [Mycoplasma leachii PG50] gi|312950071|gb|ADR24667.1| conserved hypothetical protein [Mycoplasma leachii PG50] Length = 584 Score = 326 bits (835), Expect = 7e-87, Method: Composition-based stats. Identities = 123/560 (21%), Positives = 241/560 (43%), Gaps = 18/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N+ + + ++D GV +P+ + G++ V P +I + Sbjct: 3 DIKFTALGGQDERGKNLYVLEI----DNDFFILDAGVKYPEKGILGINTVIPKFDYIKQN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 +K + IF+T+ + GA+ L + P+Y + + K RV K Sbjct: 59 KKKIKGIFLTNPSAYNMGAIPYLLKEIEAPIYCNEITELIARIKFQKLRVKNKDHILKVV 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 D + +G +E R S P++ V + +G+IV+ GD+ +D TD L Sbjct: 119 HDKDILKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 I G+LAL+ D+ A R+ + I K I K ++V F + ++ I Sbjct: 179 SQIAKRGVLALISDAEFASRKDFTVPNHKIDKYILAPFKEKNTKIIVAIFEEDIHKLGQI 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 A++ RKI + G ++ V+ + + L ++I +G+ Sbjct: 239 CMAAKENNRKIAVYGRTMDAVLRSNLIHENLVIKPEDLISIQ-EYVNSNNGVLIISGTGD 297 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + S LA+++ V+ EKD +I ++ + G E I + L R++A + Sbjct: 298 DLYSKLAKIATSNDSLVEFTEKDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKN 357 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKM 421 S D+K + + P+ + I + ++ A++ G+ + + NG++ Sbjct: 358 IW--SMRASYEDIKMLTSILNPKYFIPIKALYKEFLNAEKAAIEAGVDNQNIRIIDNGEI 415 Query: 422 LRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNI 479 L+L + HG DG IG + + +R+QL+ G + V +D + + Sbjct: 416 LKLSKNHLAISEHGAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKEL 475 Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDL-----PQFRRKDLKLLRESISSAL 534 + + G+ Y + I K+L + + +++ ++ DL +++ I+S + Sbjct: 476 ISLIDTQMRGVL-YIQEDNPIFKILQREITNLIIEGQTLYKKDPKKYDLNEIKKDITSRI 534 Query: 535 RSLLKKVWGKKPLVTVFINK 554 + L+K+ GK P+V V IN+ Sbjct: 535 KQLIKQESGKTPIVLVIINE 554 >gi|110004215|emb|CAK98553.1| conserved hypothetical upf0036 protein [Spiroplasma citri] Length = 555 Score = 326 bits (835), Expect = 7e-87, Method: Composition-based stats. Identities = 116/560 (20%), Positives = 234/560 (41%), Gaps = 16/560 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG+ E G N+ + + D G P+ + G+D+V P+ ++ + Sbjct: 3 KINFFALGGLDERGKNLYCIE----VEQDIFIFDAGTKNPERGILGIDVVIPNFDYLKEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC-ISF 123 R + +FIT ++ A+ + L +PVY S +L+ +V K C Sbjct: 59 RARIKGVFITKPSDECSEAITYILKELALPVYGSDLTCNILKFHLQRFKVRGKEECFNVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A D +D +E ++P + + +P G I++TGD+ D A TD L Sbjct: 119 NAKDLLDFDLCKVEVFSTTTNMPNSYGFALHTPDGTIIYTGDYIFDAKADPNFATDLQHL 178 Query: 184 CA-IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 I +L + ++++A R IK I +K + +++ F + +I Sbjct: 179 NQIIAKNKVLLFLSEASSASRRDYTAPNHKIKNYIERAVKETESRIILACFDQDLHKISE 238 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + D+ + + + G +L + V D + + + L E+ ++I TGS Sbjct: 239 LFDLVRENNISVGIYGQTLLESLKVLSDSKKLNFNGINLKGLQEA-VKEEKSLIIVTGSG 297 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 S L +++ G + + E DT+I ++ PG+E+ ++ + L + IA + Sbjct: 298 ERLYSRLIKIASGNDDILDIKESDTIILATPPNPGSELNHANVLDELARTVAKTIALSDK 357 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGK 420 ++ D+K M I+P+ V + G V + A++ GI + V NG+ Sbjct: 358 KVWTIT--ASYEDVKLMSSIIKPKYFVPVKGLYKDFVQARMAAIEAGINPEHIFIVDNGE 415 Query: 421 MLRLFPDP-IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN- 478 L + ++V DG +G + + +R+QL+ G + + V +D+ Sbjct: 416 GLEFIDGEYTKKSNKVKTSDLYVDGIGVGDIGAVVLNERKQLATDGVVIIGVSIDSKTKE 475 Query: 479 IFGVPEIVDIGIPAYDGDGG---KIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 + + + G+ + K+ K++++ + D+ + I S + Sbjct: 476 LVSLIDTQMRGVIYIQENNDIFRKMQKVIIEIIEKHYKKAVVGEIYDVNEAKNEIRSTIS 535 Query: 536 SLLKKVWGKKPLVTVFINKI 555 S +K GK P++ +N+I Sbjct: 536 SFVKAETGKTPIILAIVNEI 555 >gi|85711234|ref|ZP_01042294.1| metallo-beta-lactamase family protein [Idiomarina baltica OS145] gi|85695147|gb|EAQ33085.1| metallo-beta-lactamase family protein [Idiomarina baltica OS145] Length = 430 Score = 326 bits (835), Expect = 8e-87, Method: Composition-based stats. Identities = 147/413 (35%), Positives = 231/413 (55%), Gaps = 11/413 (2%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKD------DLPGVDLVFPDITFIMKERKNLMAIF 72 MNM LYG+ +W+MIDCGVSF + + ++V D FI + L AI Sbjct: 1 MNMNLYGHA----GRWLMIDCGVSFDEPLNPAKPNSLKHEVVCADPRFITDNKDELEAII 56 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITHAHEDH GA+ DLW P+Y +P+ +L K Y ++ + I G+ V +G Sbjct: 57 ITHAHEDHIGAIEDLWLRWQKPIYTTPYTAAVLRKKLAYTAFAELVSIIEVNDGETVQIG 116 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 FS+ +R HS+PE +VI +P ++HTGDWK+D I D +G GI Sbjct: 117 PFSVTWIRFTHSLPEPFGVVIETPAARVLHTGDWKIDAQPITSAGFDSGVFQRLGLTGID 176 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 A++ DSTNA++ G SE + + A+G V+V FSS+++R+ ++ +AE GR Sbjct: 177 AVVGDSTNALKPGWSTSEADCHDGLLAEVNEAQGRVVVGCFSSNIARLITLARVAEASGR 236 Query: 253 KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + +LG SL+R V +A G+ + + G P +++V+ATG QGE R+AL +L Sbjct: 237 YLAVLGRSLERNVGLARQFGLWPEHIELIDHTHVGYLPAREVLVVATGCQGESRAALNRL 296 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA-EDAECPVHVSGHP 371 + ++ L + D VI S+ IPGNE+ I + N+ + + V+ E ++ +H SGHP Sbjct: 297 ADDSHPHLVLDKGDKVIMSAIIIPGNELDIQRLTNKFQARRIEVVHAEQSDRILHASGHP 356 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +LK++YQW++P++++ HGEP H+ AH E+A + G+ NG + R+ Sbjct: 357 NQEELKQLYQWVKPRMVIPTHGEPDHMKAHAEVAKKAGVRMTLTGMNGDLFRI 409 >gi|197294174|ref|YP_001798715.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Candidatus Phytoplasma australiense] gi|171853501|emb|CAM11341.1| Putative hydrolase of the metallo-beta-lactamase superfamily [Candidatus Phytoplasma australiense] Length = 561 Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats. Identities = 106/563 (18%), Positives = 218/563 (38%), Gaps = 19/563 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG+GE G N L + +ID G+ +P L G+D + D + Sbjct: 3 DIKFFALGGLGENGKNFYLLQI----NESCFIIDAGLKYPSVSLYGIDAMIADYHKLESM 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCISF 123 + + +F+T A E + GA+ ++P+Y S F + +L+ +++ + + Sbjct: 59 KDKIKGVFLTSAFETNLGAVPYFIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + + I + IPET+ + ++ +G IV+TG+ K + T+ L Sbjct: 119 KTNEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGELKSLESQNQFFQTNLTQL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISE----KGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + +LA + S A S+ I + KG ++V + + + + Sbjct: 179 TKSTQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFK 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF--GLYPREQLIVI 297 I+ I +A ++ K+ +LG+ + ++ VA+ +K + QL+V Sbjct: 239 IQKAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVF 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 G L Q++ + L +D ++ S+ + G + L + Sbjct: 299 LFGKHFATLQRLQQMANKTDPKIHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRH--NIK 356 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + + +S Y +LK M +++P+ ++ + GE H K++A + G + Sbjct: 357 SHLLIKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQVKKIAQKNGFKSNQIFL 416 Query: 416 VRNGKMLRLFPDP--IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + NG + R D L DG + + + R L+ G + + V + Sbjct: 417 LENGSIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNV 476 Query: 474 D-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISS 532 + + I G P+IV G + I L + ++ I Sbjct: 477 NAKYKKIVGEPKIVSKGFLEQ-TETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRE 535 Query: 533 ALRSLLKKVWGKKPLVTVFINKI 555 ++ L K K+P++ + Sbjct: 536 SISKFLFKETKKRPIIIPIFISV 558 >gi|227815537|ref|YP_002815546.1| ribonuclease J [Bacillus anthracis str. CDC 684] gi|227007481|gb|ACP17224.1| ribonuclease J [Bacillus anthracis str. CDC 684] Length = 377 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 118/378 (31%), Positives = 196/378 (51%), Gaps = 6/378 (1%) Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 1 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 60 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 61 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS 120 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 121 QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 180 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA G+ + VRN Sbjct: 181 SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN 240 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + ++ G DG IG + + R+QLS G L + + + Sbjct: 241 GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG 300 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 +I P+I+ G Y D + K L K + T+ +L + + +L+ + AL Sbjct: 301 DIISGPDIISRGF-VYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKY 359 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 360 IYTNTKRKPMILPIIIEV 377 >gi|39939123|ref|NP_950889.1| hypothetical protein PAM_637 [Onion yellows phytoplasma OY-M] gi|39722232|dbj|BAD04722.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 574 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 115/568 (20%), Positives = 230/568 (40%), Gaps = 20/568 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG+GE G N + + + ++D G+ +P L G+D + D + Sbjct: 14 NDIKFFALGGLGESGKNFYVLQI----NESYFLLDAGLKYPNTALYGIDSMIADYYKLQD 69 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCIS 122 + + +F++ A E + GAL L +PVYAS F + +L+A +++ + Sbjct: 70 IKDKIKGVFLSSAFETNLGALPYLMKDFDIPVYASYFTMQVLKAHFQSHKINYRNFNLQI 129 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +++ ++ + IPET+ +V ++ G+IV++GD KL T+ Sbjct: 130 VKIDERLIFDDVAVAFFATSQLIPETLGMVFQTKRGSIVYSGDLKLLHSKNKFFQTNFTR 189 Query: 183 LCAIGNEGILALMCD-----STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 L + +LA + ST+A E + + + ++G +++ + + Sbjct: 190 LAQLAQPKVLAFLPSCRGAFSTSAHNNDASSFEHKLNNYFSNHLLKSEGIIVIPSLMPDL 249 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF--GLYPREQLI 295 +I+SI+D+A ++ KI LG ++++ +A+ G +K L + +L+ Sbjct: 250 LKIQSIVDLACRLNFKITFLGRKSEKIIDIALKKGFLKVPSFNLVELKTLEDSKKHPKLV 309 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V G E L ++ + + L +D V+ S+ + G + L Sbjct: 310 VFVLGKHFESLFHLQKMCQKTDTLIHLTPQDLVLLMSKEMAGIAKMQSQTLDLLSRHN-- 367 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACV 413 + A + + Y LK M +++PQ ++ + GE H +++A + Sbjct: 368 IQAHVLVKDLDACSNDYEKTLKLMLNFLKPQYIIPVMGEYRHQYQVQKIAQSLGFKLNQT 427 Query: 414 PPVRNGKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG-HLSVN 470 + NG + D + V L DG + D + R L+ G + V Sbjct: 428 FLLENGSIWHCDAQKDAFAESNTGVLTEILIDGTPVIGGQDFIMKDRELLAADGVVIVVA 487 Query: 471 VLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESI 530 + H I G P++V G A D + I L + + +++I Sbjct: 488 NVNAKHKKIVGAPQLVSKGFLA-DSETSHIFPKLKAIFDEKSEIFLKKKYLKWNDFKKNI 546 Query: 531 SSALRSLLKKVWGKKPLVTVFINKISRQ 558 +L L K K+P+V + + Sbjct: 547 RESLVKFLFKETKKRPIVIPIFISVKSE 574 >gi|85057378|ref|YP_456294.1| Zn-dependent hydrolase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789483|gb|ABC65215.1| Zn-dependent hydrolase [Aster yellows witches'-broom phytoplasma AYWB] Length = 574 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 229/568 (40%), Gaps = 20/568 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG+GE G N + + + ++D G+ +P +L G+D + D + Sbjct: 14 NDIKFFALGGLGESGKNFYVLQI----NDSYFLLDAGLKYPNTNLYGIDSMIADYYKLQD 69 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIPCIS 122 + + +F++ A E + GAL L +PVYAS F + +L+A +++ + Sbjct: 70 IKDKIKGVFLSSAFETNLGALPYLMKDFDIPVYASYFTMQVLKAHFQSHKINYRNFNLQI 129 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ +++ ++ + IPET+ +V ++ G+I+++GD KL T+ Sbjct: 130 VKSDERLIFDDVAVAFFATSQLIPETLGMVFQTKRGSIIYSGDLKLLHSKNKFFQTNFTR 189 Query: 183 LCAIGNEGILALMCDSTNAM-----REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 L + +L + A E + + + ++G +++ + + Sbjct: 190 LAQLAQPKVLTFLPSCRGAFITSSHNNDASSFEHKLNNYFSNHLLKSEGIIVIPSLMPDL 249 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF--GLYPREQLI 295 +I+S++++A ++ KI LG ++++ VA+ G +K L + +L+ Sbjct: 250 LKIQSVVNLACRLNFKITFLGRKSEKIIDVALKKGFLKVPSFNLVELKTLEDSKKHPKLV 309 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V G EP L ++ + + L +D V+ S+ + G + L Sbjct: 310 VFVLGKHFEPLFHLQKMCQKTDNLIHLTTQDLVLLMSKEMSGIAKMQSQTLDLLSRHN-- 367 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE--GIACV 413 + A + Y LK M +++PQ ++ + GE H +++A + + Sbjct: 368 IPARVLVKDLDACSDDYEKTLKLMLNFLKPQYIIPVMGEYRHQYQVQKIAQSLGFKLNQI 427 Query: 414 PPVRNGKMLRLF--PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG-HLSVN 470 + NG + D + V L DG + D + R L+ G + V Sbjct: 428 FLLENGSIWHCDSQKDAFAESNTGVLTEILIDGTPVIDGQDFIMKDRELLAADGVVIVVA 487 Query: 471 VLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESI 530 + H I G P++V G A D + I L + + +++I Sbjct: 488 NVNAKHKKIVGAPQLVSKGFLA-DSETSHIFPKLKAIFDEKSEIFLKKKYLKWNDFKKNI 546 Query: 531 SSALRSLLKKVWGKKPLVTVFINKISRQ 558 +L L K K+P+V + + Sbjct: 547 RESLVKFLFKETKKRPIVIPIFISVKSE 574 >gi|218661334|ref|ZP_03517264.1| beta-lactamase domain protein [Rhizobium etli IE4771] Length = 363 Score = 318 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 185/306 (60%), Positives = 241/306 (78%), Gaps = 1/306 (0%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K +ELVFLPLGGVGEIGMN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ Sbjct: 3 KQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFL 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPC 120 ERKNL AI ITHAHEDHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P Sbjct: 63 ASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKARIGEVPV 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 F+AGD ++VG FSIE V VNHSIPE M+L+IR+P GN++HTGDWK+D + LG +TD+ Sbjct: 123 TPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLTDE 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G+EG+LALMCDSTNA+R+G SEK + +++ I+++A+G V +TTFSS+V RI Sbjct: 183 TRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRI 242 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R++ + AE GR+++LLGSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TG Sbjct: 243 RTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVILTG 302 Query: 301 SQGEPR 306 SQGE R Sbjct: 303 SQGEAR 308 >gi|228900295|ref|ZP_04064525.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] gi|228859330|gb|EEN03760.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] Length = 377 Score = 318 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 118/378 (31%), Positives = 193/378 (51%), Gaps = 6/378 (1%) Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 1 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 60 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 61 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEANEVNRLDPKQVALLCTGS 120 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I + L G +VI Sbjct: 121 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG 180 Query: 362 EC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRN 418 VHVSGH Y +LK M ++P+ + IHGE L H LA GI + VRN Sbjct: 181 SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKENIFIVRN 240 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HY 477 G ++ + + + G DG IG + + R+QLS G L + + + Sbjct: 241 GDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG 300 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I P+I+ G Y D + + L K + T+ +L + +L+ + AL Sbjct: 301 EIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGRY 359 Query: 538 LKKVWGKKPLVTVFINKI 555 + +KP++ I ++ Sbjct: 360 IYTNTKRKPMILPIIIEV 377 >gi|218462144|ref|ZP_03502235.1| beta-lactamase domain protein [Rhizobium etli Kim 5] Length = 343 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 207/342 (60%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 MN+ALYGYG P R+WIM+DCGV+FP DLPGVDLV PDI F+ ERKNL AI ITHAHE Sbjct: 1 MNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIRFLASERKNLKAIIITHAHE 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDKVDVGAFSIE 137 DHYGAL DLW L+VPVYAS F GLLEAKR +E+ ++P F+AGD ++VG FSIE Sbjct: 61 DHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKAKIGEVPVTPFKAGDTINVGPFSIE 120 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V VNHSIPE M+L+IR+PVGN++HTGDWK+D + LG +TD+ +G+EG+LALMCD Sbjct: 121 GVAVNHSIPEPMSLMIRTPVGNVIHTGDWKIDHEPSLGPLTDETRFRQLGDEGVLALMCD 180 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 STNA+R+G SEK + +++ I+++A+G V +TTFSS+V RIR++ + AE GR+++LL Sbjct: 181 STNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVGRIRTVAEAAEAAGREVLLL 240 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 GSSLKRVV VA D+G+++ + F+S+E +G PR++++VI TGSQGE R+ALA+LSR EM Sbjct: 241 GSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVILTGSQGEARAALAKLSRDEM 300 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 RNV A D V+FSSRAIPGNE AI IKN LVEQGV +I + Sbjct: 301 RNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIITD 342 >gi|228474954|ref|ZP_04059682.1| ribonuclease J 2 [Staphylococcus hominis SK119] gi|228270939|gb|EEK12327.1| ribonuclease J 2 [Staphylococcus hominis SK119] Length = 434 Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats. Identities = 115/437 (26%), Positives = 210/437 (48%), Gaps = 7/437 (1%) Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +I +HSIP+++ + I + G+IV+TG++K D D Sbjct: 1 MNHDSVMRFKNVNITFFNTSHSIPDSLGICIHTSYGSIVYTGEFKFDQSLQGHYAPDMKR 60 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG EG+ AL+ DST A + G E I+ +IYD KG ++V+ ++S+ RI+ Sbjct: 61 MAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQQ 120 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 ++++A ++ RK+ LG SL+ + A +G L L YP+ ++++IATG Sbjct: 121 VLNVASKLNRKVSFLGKSLESSFNTARKMGYFDIPKDLLLPINEVENYPKNEVVIIATGM 180 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 +GEP AL+Q+++ + + + + E D+V + A EV I + N LV G +I Sbjct: 181 EGEPIEALSQMAQHKHKILNIEEGDSVYLAITASANMEVIIANTLNELVRAGAHII--PN 238 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNG 419 +H S H +LK M ++P+ + + GE +AH +LA + G+ + V G Sbjct: 239 NKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANEAGVAPEKIFLVEKG 298 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYN 478 ++ + + ++V G L DG +G ++ + R L+ G V LD + Sbjct: 299 DVIHFDGSHMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRR 358 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLL 538 I PEI G Y + ++ K V V Q +R + +++++ + LL Sbjct: 359 IAAGPEIQSRGF-VYVRESEELMKEAEDKVREIVEAGLQEKRIEWSEIKQNMRDQISKLL 417 Query: 539 KKVWGKKPLVTVFINKI 555 + ++P++ I++I Sbjct: 418 FESTKRRPMIIPVISEI 434 >gi|221134825|ref|ZP_03561128.1| metallo-beta-lactamase family protein [Glaciecola sp. HTCC2999] Length = 419 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 144/419 (34%), Positives = 231/419 (55%), Gaps = 10/419 (2%) Query: 36 MIDCGVSFPKDDLPGVD---------LVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 M+DCG++F P D LV D +FI R L I ITHAHEDH G + Sbjct: 1 MVDCGLTFNSPLNPAHDKDEYVKRHELVAADPSFIEDRRDQLAGIIITHAHEDHVGGIPY 60 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 LW P+Y + F +L K + + + D+ +G FS++ + + HS+P Sbjct: 61 LWERFKQPIYTTKFTAEVLRRKLSEVEFGHLVDIVEIEPLDEFTIGPFSVKWLPITHSLP 120 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 E L+I +P + HTGDWKLD + ++G+ ++D + + + A++CDSTNA++ G Sbjct: 121 EPCGLMISTPAAKVFHTGDWKLDSNPVVGEGVNRDHFMHLASLNVDAMVCDSTNALKHGN 180 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +SE + +Y + +A V+VT F+S+++R+ +I +A++ GR++ + G SL ++ Sbjct: 181 SVSESACESGLYHYINSAPKRVVVTCFASNIARLITIARVAQKTGRRMAVFGRSLVNMIG 240 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 +A G +D + + G P E+++V+ATGSQGEPR+AL QL++ R++ L+ KD Sbjct: 241 IARRTGYWPEDCIMIDRRHVGYLPEEEVLVVATGSQGEPRAALGQLAKDTHRDLSLSAKD 300 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 T+IFS+ IPGNE I + N + + ++ V A DA P+H SGHP +LK MYQW++P Sbjct: 301 TIIFSTITIPGNEKPIEQLVNAFIARQIQVVQAHDAVLPIHASGHPNEQELKSMYQWVKP 360 Query: 386 QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDG 444 + V +HGEP HL H E+A G+ +NG + +L + V Sbjct: 361 LISVPVHGEPEHLQRHGEIARVTGVKSSLVGQNGDLFQLSSPVMIKRGVVNAKRIAVKR 419 >gi|194246608|ref|YP_002004247.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma mali] gi|193806965|emb|CAP18397.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma mali] Length = 559 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 115/564 (20%), Positives = 217/564 (38%), Gaps = 17/564 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E+ F LGG+ E G N L + + +ID G+ +P + + G+D + D Sbjct: 1 MK--EIQFFALGGLNENGKNFYLL----KIKKSYFIIDAGLKYPNEIMYGIDCIIADYNQ 54 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-KKIP 119 + K + + IF+T A E + GA L +L PVY + F + +L+ ++ + + Sbjct: 55 LEKIKDQIQGIFLTSASETYVGAFAYLIQYLKKPVYTTYFIMQVLKKYLKKHKIIYQDLE 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V + + +PET L + G +V++ + +L TD Sbjct: 115 LNILKDDQIVIFTDTKVSFFLITQYLPETFGLAFETEKGFVVYSNEVQLLQQKDKSFFTD 174 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 L +I + +LA S A G + I + N + +++ + + Sbjct: 175 FFKLTSIAKQKVLAFFTTSQKAFISGEPEKLQNIHYCLNSYFINLQRNIIIVLLIPDLLK 234 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS--DESFGLYPREQLIVI 297 I+ IIDIA + KI +LG + ++ VA+ +K + + L+VI Sbjct: 235 IQLIIDIAVKRNLKIAILGRKSQIIMDVALQKKYLKIPDSNFVNLKKIEDHLNYKNLVVI 294 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 G Q EP L ++ + R V L +D V+ S G+ + L V + Sbjct: 295 VVGKQFEPFYRLQRMCKKTDRLVHLTSEDKVLLMSVESAGSARIYSKTLDFLSRNNVSI- 353 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPP 415 + + + + +LK M ++P+ L+ I GE H K+++ + + Sbjct: 354 -DILIKDLLTYSYNFSENLKFMLNLLKPKYLIPISGEYRHQYQVKKISNELDYLDKNIFL 412 Query: 416 VRNGKMLRLFPDPIEIIDEVVHG---LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 + NG + + + L DG + D + R L+ G + Sbjct: 413 LENGDIWHYDFKKEPYVQKKAFKKLGEILIDGTPVEDGNDFIMKDREFLAMDGVIIFIAN 472 Query: 473 LD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + + I G E+V G A + L + + + + ++++ Sbjct: 473 ISIKNKKILGKTELVSKGFIASNEVNNVFFAKLKQNFENKIEFFLKQNNLKWLVFKKNLR 532 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 L + K KKP+V + I Sbjct: 533 EELIKFIFKEIRKKPIVIPILITI 556 >gi|193875754|gb|ACF24513.1| myb domain containing transcription regulator [Gymnochlora stellata] Length = 552 Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 272/560 (48%), Gaps = 26/560 (4%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GEIGMN L G + K+I+ID G+ F + G+ + PDI + + + ++ I Sbjct: 3 LGEIGMNCMLIG----ENNKFIIIDAGIMFTEFTKYGIKKIVPDINLLSYFKDRVESLII 58 Query: 74 THAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 TH HEDH GAL + +P+Y S F L+ + + F Sbjct: 59 THGHEDHIGALSWIIPIFENRLPIYVSGFVYNLITQRISSSDRKNEYNLKRFSLKKMFQA 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G F + RV HSIP+ L I++ GN++HTGDWK DD + G+ TDK L I E + Sbjct: 119 GPFHCVAFRVTHSIPDCCGLFIKTSFGNVLHTGDWKFDDSPLDGESTDKCFLEKISQESV 178 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKN--AKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L +M DSTNA G SE ++ +I + + N KG ++ T F+S+V R+ SI AE Sbjct: 179 LLMMSDSTNAQTSGRTESESLVQDSIINHICNPLNKGRIITTQFASNVFRLYSIKKAAEI 238 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ +G+SL + A G ++ +S + YP +++I++ TGSQGE S Sbjct: 239 TKRKVSFIGASLDSYLEAAFLDGRAPFNPKMLISHDEINNYPPDEIIIVTTGSQGENNST 298 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L S G + L D +++S++ IPGN + + NR+ G ++I + +H S Sbjct: 299 LNLSSMGLSSRLILDPSDVLVYSAKIIPGNNKKVVKMLNRISSIGCKIIYGN-NQKIHTS 357 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELA-LQEGIACVPPVRNGKMLRLFPD 427 GH Y ++LK + + ++P+ + IHGE + L H E+A + GI +RNG++L ++P Sbjct: 358 GHAYEDELKEIIRIVKPKYFLPIHGETMSLNHHSEIALKKCGIKKTINIRNGQLLSIYPH 417 Query: 428 --------PIEIIDEVVHGLFLKDGFL-IGKFADLGIAKRRQLSFVGHLSVNVLLDNHY- 477 I + E + G + +G F ++ + +R L G L + + L Sbjct: 418 ADVALNSLDIRVQGEFKCKNYFDYGNISLGVFNEVSLNERSLLGIYGILIIGIDLYKKDL 477 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I I G+ D GK+ L+ K ++ + ++ L + I +L Sbjct: 478 MIQSNIRISTKGL---WTDRGKLQALIKKIIMNVLSKC--RSEISVQSLEQIIYDSLTYT 532 Query: 538 LKKVWGKKPLVTVFINKISR 557 K+ P +++FIN+ + Sbjct: 533 CYKMNFLIPEISIFINQFDK 552 >gi|75764281|ref|ZP_00743824.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488233|gb|EAO51906.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 365 Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 108/367 (29%), Positives = 188/367 (51%), Gaps = 6/367 (1%) Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 L+ DSTNA R G SEK + I + A+G ++V +F+S+V RI+ + D A + GR Sbjct: 1 MLISDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQQVFDAAAETGR 60 Query: 253 KIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 K+ ++G S+ +VV +A +G + + + +S + +P +++ ++ TGSQGEP +AL++ Sbjct: 61 KVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTGSQGEPMAALSR 120 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 +++ + + + + DTVI ++ IPGNE+++ I + L G V+ E VHVSGH Sbjct: 121 MAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVY-YGERKVHVSGHG 179 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPI 429 +LK M ++P+ V +HGE AH LA GI + V G ++ D Sbjct: 180 SQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIFIVEKGDVIAFGDDEA 239 Query: 430 EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPEIVDI 488 ++ +V G L DG +G ++ + R+ LS G L V V L I PEI+ Sbjct: 240 NLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKKIISGPEIISR 299 Query: 489 GIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLV 548 G Y + + + + V V + + +L+++I L L + +KP++ Sbjct: 300 GF-VYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLYEETKRKPMI 358 Query: 549 TVFINKI 555 I ++ Sbjct: 359 LPIIMEV 365 >gi|15807662|ref|NP_296138.1| hypothetical protein DR_2417m [Deinococcus radiodurans R1] Length = 579 Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 112/327 (34%), Positives = 189/327 (57%), Gaps = 9/327 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L +PLGG+GEIG N+ ++ YG + +++D G++FPK G+DL+ P I ++++ Sbjct: 18 TLEVIPLGGMGEIGKNITVFRYG----DEIVVVDGGLAFPKAHQMGIDLIVPRIDYLLEH 73 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +TH HEDH G L +++ L VPVY P + L+ K + + + Sbjct: 74 QDKIKGWILTHGHEDHIGGLPYIFARLPRVPVYGLPLTLALVREKLSEFGL-QDVDLREV 132 Query: 124 QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDK 180 GD+V G +F E + HSIP+ ++++PVG+++HTGD+K+D D G V+D Sbjct: 133 TYGDEVRFGQSFVAEFFCMTHSIPDNAGYILKTPVGDVLHTGDFKIDPDVGTGAGIVSDL 192 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + + G +G+L L+ DSTNA R G SE I +N+ +I+K +G V +TTF+S V RI Sbjct: 193 ERVEQAGKDGVLLLISDSTNAERPGHTPSEAEIARNLEEIIKGCRGRVFLTTFASQVYRI 252 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 ++I+D+A + GR++V+ G S+ + A G + + FL+ E G +Q++ + TG Sbjct: 253 QNILDLAHRQGRRVVMEGRSMIKYAQAAQATGHMNPPEPFLTSEEVGELQDQQVLFVCTG 312 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDT 327 SQG+P + L +L+ G ++ A Sbjct: 313 SQGQPMAVLGRLAFGTHAKIRAAPGGH 339 >gi|15829176|ref|NP_326536.1| hypothetical protein MYPU_7050 [Mycoplasma pulmonis UAB CTIP] gi|14090120|emb|CAC13878.1| conserved hypothetical protein [Mycoplasma pulmonis] Length = 546 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 122/558 (21%), Positives = 243/558 (43%), Gaps = 21/558 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F LGG E G N + Y S + + G P + GVD V P +++ K Sbjct: 3 KLQFFALGGQDENGKNCFVIEY----SDDIFIFNIGAKVPINSTYGVDTVIPSFSYLKKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 K + IFIT + AL + + + +Y SPF+ + + ++ I Sbjct: 59 AKKIRGIFITDTKNSSFSALPWILMQIPGLKIYTSPFSKVNVLDRVSKYKIGHNDYEIIT 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + D + G +I+ ++V S+P T+ ++SP+G++V ++ L ++ G TD ++ Sbjct: 119 ISKD-ISFGDITIKPIQVFGSVPGTLGFDVQSPMGSVVFLLNFILGENGFFGK-TDLLAI 176 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC--VLVTTFSSSVSRIR 241 N +LAL+ DS + G + + K++ + +NAK ++V + + + Sbjct: 177 KKQVNNNLLALVMDSGKSKNPGFAKDKIHLPKSVEQVFENAKDNERIIVGAYDEEIGSLN 236 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I+D+A++ R I+ G S + + + + K FL+ + P +++ TG+ Sbjct: 237 YILDLAKKYNRPIITYGKSYGKQIFLIKKINPKFKTSEFLNYKKANFVP--NALILVTGT 294 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 ++++ E + L D VIF + + G EV H +++ + +++ D Sbjct: 295 VERLYQRFLRIAKNEDVYLNLKSSDNVIFIAPPVNGIEVIAAHTLDQVTKVSPKIL--DV 352 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL--ALQEGIACVPPVRNG 419 + P D+ + +RP+ + + G +LV L L ++NG Sbjct: 353 TEEEYYRHRPASKDIYQTIDVLRPKYYIPVQGLYRYLVDAAALVRPLGYNTKNTLVLQNG 412 Query: 420 KMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY 477 K+ + ++ + + DGF +G + I +R +++ G + ++ ++ Sbjct: 413 KIAEFDGGKLISHNKKIKQVGDDIIDGFGLGDVSHEVIREREKMASNGVVLISACINKFK 472 Query: 478 NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSL 537 I G EI +G+ + D +I+ + V V + LK+++E I +R Sbjct: 473 QIKGKIEIKYLGLVSI-ADRDEINDFVRSIV---VNNFYDEENSSLKVIQEKIRKQVRKK 528 Query: 538 LKKVWGKKPLVTVFINKI 555 L K K+P+V V KI Sbjct: 529 LYKKIEKEPIVVVVFYKI 546 >gi|54019978|ref|YP_115524.1| hypothetical protein mhp009 [Mycoplasma hyopneumoniae 232] gi|53987151|gb|AAV27352.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] gi|144227422|gb|AAZ44103.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 673 Score = 299 bits (765), Expect = 1e-78, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 230/564 (40%), Gaps = 21/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P D GVD + D T++ + Sbjct: 3 KISFFALGGQDENGKNCYILEI----DDNIFIINSGAKIPLDSSVGVDTIIADFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +FIT A + + AL L L + +Y+S F L+ + R+S+ + Sbjct: 59 QHKIRGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEVIP 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + S+ V S+P T+ + G IV ++ + + + G+ T+ + + Sbjct: 119 ITSELKINEKISVSPFPVAGSMPGTIGFCFHTEDGGIVFMANYVVGNLGVYGE-TNFELI 177 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSR 239 I +GIL + DS + G I++ K + + + + ++V+ + + Sbjct: 178 KKISQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL---IV 296 I+ IID++ + R+I G ++ + + + ++L F + ++ Sbjct: 238 IQEIIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVI 297 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T S ++ + KL + D VI + I G E + +++ + + Sbjct: 298 LITSSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSI 357 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + D PY D+ M Q ++P+ + I G +L+ +A+ + + Sbjct: 358 V--DISESDFGLARPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNII 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVH--GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + ++ GF IG + +R LS G + V+ L Sbjct: 416 VLQNKRSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFL 475 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D IF PEI GI + + + + ++ K + ++ + K LK L++ Sbjct: 476 FDPIEKKIFSTPEITTYGILSRE-NREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQ 534 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 ++ L +++ K+P V+V I+ I Sbjct: 535 KNIKRKLLRIFDKEPSVSVLIHNI 558 >gi|71893368|ref|YP_278814.1| hypothetical protein MHJ_0009 [Mycoplasma hyopneumoniae J] Length = 674 Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 230/564 (40%), Gaps = 21/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P D GVD + D T++ + Sbjct: 4 KISFFALGGQDENGKNCYILEI----DDNIFIINSGAKIPLDSSVGVDTIIADFTYLEEN 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +FIT A + + AL L L + +Y+S F L+ + R+S+ + Sbjct: 60 QHKIRGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEVIP 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + S+ V S+P T+ + G IV ++ + + + G+ T+ + + Sbjct: 120 ITSELKINEKISVSPFPVAGSMPGTIGFCFHTEDGGIVFMANYVVGNLGVYGE-TNFELI 178 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSR 239 I +GIL + DS + G I++ K + + + + ++V+ + + Sbjct: 179 KKISQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVS 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL---IV 296 I+ IID++ + R+I G ++ + + + ++L F + ++ Sbjct: 239 IQEIIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVI 298 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T S ++ + KL + D VI + I G E + +++ + + Sbjct: 299 LITSSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSI 358 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + D PY D+ M Q ++P+ + I G +L+ +A+ + + Sbjct: 359 V--DISESDFGLARPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNII 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVH--GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + ++ GF IG + +R LS G + V+ L Sbjct: 417 VLQNKRSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFL 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D IF PEI GI + + + + ++ K + ++ + K LK L++ Sbjct: 477 FDPIEKKIFSTPEITTYGILSRE-NREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQ 535 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 ++ L +++ K+P V+V I+ I Sbjct: 536 KNIKRKLLRIFDKEPSVSVLIHNI 559 >gi|144575235|gb|AAZ53386.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 673 Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 230/564 (40%), Gaps = 21/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P D GVD + D T++ + Sbjct: 3 KISFFALGGQDENGKNCYILEI----DDNIFIINSGAKIPLDSSVGVDTIIADFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +FIT A + + AL L L + +Y+S F L+ + R+S+ + Sbjct: 59 QHKIKGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEVIP 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + S+ V S+P T+ + G IV ++ + + + G+ T+ + + Sbjct: 119 ITSELKINEKISVSPFTVAGSMPGTIGFCFHTEDGGIVFMANYVVGNLGVYGE-TNFELI 177 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSR 239 I +GIL + DS + G I++ K + + + + ++V+ + + Sbjct: 178 KKISQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL---IV 296 I+ IID++ + R+I G ++ + + + ++L F + ++ Sbjct: 238 IQEIIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVI 297 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T S ++ + KL + D VI + I G E + +++ + + Sbjct: 298 LITSSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSI 357 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + D PY D+ M Q ++P+ + I G +L+ +A+ + + Sbjct: 358 V--DISESDFGLARPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNII 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVH--GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + ++ GF IG + +R LS G + V+ L Sbjct: 416 VLQNKRSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFL 475 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D IF PEI GI + + + + ++ K + ++ + K LK L++ Sbjct: 476 FDPIEKKIFSTPEITTYGILSRE-NREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQ 534 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 ++ L +++ K+P V+V I+ I Sbjct: 535 KNIKRKLLRIFDKEPSVSVLIHNI 558 >gi|205373586|ref|ZP_03226389.1| hypothetical protein Bcoam_10040 [Bacillus coahuilensis m4-4] Length = 272 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 145/265 (54%), Gaps = 4/265 (1%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+ + +PLGGVGEIG NM + +ID G+ FP++D+ G+D+V PD F+ Sbjct: 5 KNDSIRIIPLGGVGEIGKNMYVVE----VDEDLFVIDSGLKFPENDMLGIDVVIPDFYFL 60 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ + IF+TH HED GAL L + PVY + + L +A+ + Sbjct: 61 ENNKERVRGIFLTHGHEDAIGALPYLLRKIKAPVYGTKLTLALAKARIKELNQKVEGKFF 120 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + ++ + ++ + HSIP+++ + I + G IVHTG++K D A D Sbjct: 121 TIHSNSRLSFNSVNVTFFKTTHSIPDSVGIAIHTSEGAIVHTGEFKFDQSATGFYRPDIG 180 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + +G +G+L L+ DST A R G SE I + + D +AK ++V+ FS+++ RI+ Sbjct: 181 KMAQLGEKGVLCLLSDSTEAERPGFTTSESVISRQLSDAFHSAKERIIVSCFSANLIRIQ 240 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVS 266 + D A++ RK+ ++G SL++ + Sbjct: 241 QVFDAAKETNRKVAVVGKSLEKYMK 265 >gi|72080351|ref|YP_287409.1| hypothetical protein MHP7448_0009 [Mycoplasma hyopneumoniae 7448] Length = 674 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 230/564 (40%), Gaps = 21/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P D GVD + D T++ + Sbjct: 4 KISFFALGGQDENGKNCYILEI----DDNIFIINSGAKIPLDSSVGVDTIIADFTYLEEN 59 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +FIT A + + AL L L + +Y+S F L+ + R+S+ + Sbjct: 60 QHKIKGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEVIP 119 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + S+ V S+P T+ + G IV ++ + + + G+ T+ + + Sbjct: 120 ITSELKINEKISVSPFTVAGSMPGTIGFCFHTEDGGIVFMANYVVGNLGVYGE-TNFELI 178 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSR 239 I +GIL + DS + G I++ K + + + + ++V+ + + Sbjct: 179 KKISQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVS 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL---IV 296 I+ IID++ + R+I G ++ + + + ++L F + ++ Sbjct: 239 IQEIIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVI 298 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T S ++ + KL + D VI + I G E + +++ + + Sbjct: 299 LITSSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSI 358 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + D PY D+ M Q ++P+ + I G +L+ +A+ + + Sbjct: 359 V--DISESDFGLARPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNII 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVH--GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + ++ GF IG + +R LS G + V+ L Sbjct: 417 VLQNKRSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFL 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D IF PEI GI + + + + ++ K + ++ + K LK L++ Sbjct: 477 FDPIEKKIFSTPEITTYGILSRE-NREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQ 535 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 ++ L +++ K+P V+V I+ I Sbjct: 536 KNIKRKLLRIFDKEPSVSVLIHNI 559 >gi|312600982|gb|ADQ90237.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168] Length = 673 Score = 296 bits (758), Expect = 6e-78, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 230/564 (40%), Gaps = 21/564 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P D GVD + D T++ + Sbjct: 3 KISFFALGGQDENGKNCYILEI----DDNIFIINSGAKIPLDSSVGVDTIIADFTYLEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + +FIT A + + AL L L + +Y+S F L+ + R+S+ Sbjct: 59 QHKIRGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEAIP 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + S+ V S+P T+ ++ G IV ++ + + + G+ T+ + + Sbjct: 119 ITSELKINEKISVSPFPVAGSMPGTIGFCFQTEDGGIVFMANYVVGNLGVYGE-TNFELI 177 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYD--IMKNAKGCVLVTTFSSSVSR 239 I +GIL + DS + G I++ K + + + + ++V+ + + Sbjct: 178 KKISQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL---IV 296 I+ IID++ + R+I G ++ + + + ++L F + ++ Sbjct: 238 IQEIIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVI 297 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T S ++ + KL + D VI + I G E + +++ + + Sbjct: 298 LITSSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSI 357 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVP 414 + D PY D+ M Q ++P+ + I G +L+ +A+ + + Sbjct: 358 V--DISESDFGLVRPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNII 415 Query: 415 PVRNGKMLRLFPDPIEIIDEVVH--GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + ++ GF IG + +R LS G + V+ L Sbjct: 416 VLQNKRSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFL 475 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D IF PEI GI + + + + ++ K + ++ + K LK L++ Sbjct: 476 FDPIEKKIFSTPEITTYGILSRE-NREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQ 534 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 ++ L +++ K+P V+V I+ I Sbjct: 535 KNIKRKLLRIFDKEPSVSVLIHNI 558 >gi|240047381|ref|YP_002960769.1| hypothetical protein MCJ_002550 [Mycoplasma conjunctivae HRC/581] gi|239984953|emb|CAT04946.1| HYPOTHETICAL Uncharacterized protein MG423 [Mycoplasma conjunctivae] Length = 560 Score = 296 bits (757), Expect = 8e-78, Method: Composition-based stats. Identities = 110/561 (19%), Positives = 231/561 (41%), Gaps = 21/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ GV P + G+D + PD ++I K Sbjct: 3 KISFFALGGQDENGKNCYVLEI----DNNIFVINSGVKIPLNSGIGIDTIIPDFSYIEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + +FIT + + + AL L + +P+Y S F L+ + ++ I Sbjct: 59 AHKVKGVFITDSKNESFSALPWLVMKVKKLPIYCSSFTKALILDRMSKYGINTNDFEIKN 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A ++++ V S+P + G I+ ++ + + I T+ D + Sbjct: 119 IAKPIEISPQIKVKAIPVAGSMPGIYGFNFETEDGVILFLTNFIIGNLGI-YGNTNLDLI 177 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSVSR 239 +GILAL+ DS A G I + K + NA K ++V + + Sbjct: 178 KKYISHPKGILALIADSGRANFPGKTIDKIFTKSFLEKTFLNASNKSRIIVGVYDEEMLS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDESFGLYPREQLIV 296 I+ IID+A + RKI G ++ + + + K + + + ++ Sbjct: 238 IQEIIDLATKFNRKITAYGRKYDQLYDMIVKLNDKTQTKFLAKPIFFDFKQANKEQNSVI 297 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + T + ++ E ++ + D VI + I G E + + + + + Sbjct: 298 LITSTPERIYQRFIRILEKEDVFLRFKKSDHVIMLAPPINGIEQTHAKVLDEIAKVTSNL 357 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVP 414 + + +E V P +DL + + P+ + I G +LV +A + I + Sbjct: 358 V-DISESDFRV-ARPSRDDLAELIAKLEPKYFIPIQGLYRYLVVAGNIAHKAKIKKSNIV 415 Query: 415 PVRNGKMLRLFPDPIEIIDEV--VHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++N + + + +V DGF +G + + +R LS G L +++L Sbjct: 416 ILQNRRAVNFIDGNLFSQKKVIKCESEVFVDGFGVGDISFEVLRERELLSRDGVLIISML 475 Query: 473 LD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 D + I P I + GI + + + +I++++ ++ L + K ++ L+E I Sbjct: 476 YDYSSKKILSKPTITEYGILSRE-NKEEINQIIDDIIVDNFASLTKISDKIIRELQEKIQ 534 Query: 532 SALRSLLKKVWGKKPLVTVFI 552 +++ + +++ K+P+V + + Sbjct: 535 KSIKRKIFRLYDKEPMVVLVV 555 >gi|169838044|ref|ZP_02871232.1| metallo-beta-lactamase family protein, putative [candidate division TM7 single-cell isolate TM7a] Length = 486 Score = 293 bits (749), Expect = 7e-77, Method: Composition-based stats. Identities = 135/402 (33%), Positives = 208/402 (51%), Gaps = 20/402 (4%) Query: 5 ELVFLPLGGVGE--IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +P+GG+GE IG NM Y + ++ID G FP D PG++ + PDIT+++ Sbjct: 94 KLKVMPIGGLGEMGIGKNMMAIEY----DNEILIIDMGFLFPGSDYPGINYITPDITYLL 149 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + TH H DH GA L + PVYAS F IG+L+ K Sbjct: 150 ERKHMIRGVVFTHGHLDHIGAFRHLIPQIPAPVYASKFTIGMLKRTMEESDSGYKPDYYE 209 Query: 123 FQA--GDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ +G F+IE VRVNHSIP++ A+VIR+PVG +V TGDW+ +++ + G D Sbjct: 210 LNPEAHERAQIGDSFNIELVRVNHSIPDSTAVVIRTPVGVLVDTGDWRFEENPVDGRKFD 269 Query: 180 KDSLCAIG-NEGILALMCDSTNAMREG-TCISEKGIKKNIYDIM-KNAKGCVLVTTFSSS 236 D + I EGIL LM +STN EG E I+++I +M K ++++ FSS Sbjct: 270 LDRMTEIATKEGILLLMNESTNCESEGTHTHGEPEIQQSISQVMDKYQNNRLIISAFSSQ 329 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + RI+ I++ A++ GRKI L G S+ + + VA+ G IK + E P ++ Sbjct: 330 IHRIQGIMEEAKKHGRKIALAGYSMLQNLEVALRTGTIKVPKDTIVKMEDIVKLPDGKVT 389 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I TGSQGE + L +++ G R++K+ D V+FSS IPGNE + + L+ +G Sbjct: 390 IICTGSQGEFNAVLNRMASGAHRHIKIKNTDAVVFSSNPIPGNEKYVVRTVDGLMREGSD 449 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 VI S + P+ + P H Sbjct: 450 VIQNGKTNQYSQS-------TQDYLSAPIPKHVHRHQTRPQH 484 >gi|240141823|ref|YP_002966331.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] gi|240011765|gb|ACS42990.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] Length = 528 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 131/441 (29%), Positives = 221/441 (50%), Gaps = 8/441 (1%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E +V + +GG+G IG N YG+ + +W+++D G P + G+ +V PD + + Sbjct: 39 ESVVVMTIGGIGAIGSNWTAYGH----TGRWLLVDAGAGMPPKGVAGLQVVVPDPAALKQ 94 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L+A+ +THAH DH G L L +L VYA+ FA + ++ + + + Sbjct: 95 MLGRLVAVVVTHAHYDHIGGLPALAPYLPKGTKVYATKFAAECVRSQLERYHLDEHVDIR 154 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +F + + +F++ +RV HS PE +A I +P G ++HTGDW++D+ + TD Sbjct: 155 TFSPNSNLTLKSFTLTPIRVAHSSPEALAFGISTPAGRVLHTGDWRIDEAPNVTWKTDLA 214 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 ++ G+ A++ DST A R SE+ I N ++ +G V+ FSS V R+ Sbjct: 215 AVARFAKGGLAAMVADSTCADRPSPAPSEQTITANFARFLEGRRGLVVTACFSSHVDRVA 274 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-SDESFGLYPREQLIVIATG 300 +I A GR + + G SL R + A + GI+ + + + + ++I TG Sbjct: 275 GMIQAATTAGRTVFVAGRSLLRTLEAARETGILDERHAYETDLRNLESLDPSRAMLICTG 334 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +QGE + L +L+ + L D V+ S+R IPGNE + + N + G+ V + Sbjct: 335 TQGEDNAILRRLADDDHSLPALEAGDCVVLSARVIPGNEEEVAVVANAFRQAGIEVFMGE 394 Query: 361 AEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 A+ P+H SGH +++ M P++L+ +HG HL AH +LA GIA NG Sbjct: 395 ADGLPLHASGHASRPEIEAMLAAASPRLLIPVHGAGHHLAAHVDLARAAGIAECAVPANG 454 Query: 420 KMLRLFPDPIEIIDEVVHGLF 440 + LR+ E++ V Sbjct: 455 RALRVTGKTCEVLGTVELRPM 475 >gi|227364787|ref|ZP_03848836.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] gi|227070246|gb|EEI08620.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] Length = 331 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 176/334 (52%), Gaps = 6/334 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + +P GGV E G NM + ++D G+ +P+++L G+D+V PD ++ Sbjct: 2 DNNIKIIPFGGVRENGKNMYAVEI----EDQIFILDTGLKYPENELMGIDVVIPDWEYLR 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CI 121 + + ++ +F+TH H D GAL +VPV+ S I L + + KK Sbjct: 58 EHKDKIVGVFLTHGHADSIGALPYFLMDFNVPVFGSEMTIALAKLAVKNHKEVKKFNDFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +D ++ + H+IPET+ +V+ + GNIV+TGD+K D A G TD Sbjct: 118 VVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKKGYQTDLA 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L IG++G+LAL+ DS A G E+ I I + K G ++V + +S++ R++ Sbjct: 178 RLAEIGSQGVLALLSDSAGAGITGASAREQDIGDYIKETFKYQNGRIIVASVASNIMRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 II+ A +GRKIVL G +++++ A+ +G + D LF+S + Q++++ TG Sbjct: 238 QIINAAVAVGRKIVLSGKDIEQIIDTAMSLGKLHLPDDLFISRKEAEKLEPNQVVILETG 297 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 GEP +L Q++ G+ N++L D V ++ Sbjct: 298 KMGEPIKSLQQIANGDNPNLQLTSTDLVFVTTTP 331 >gi|255030427|ref|ZP_05302378.1| hypothetical protein LmonL_17426 [Listeria monocytogenes LO28] Length = 313 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 158/301 (52%), Gaps = 5/301 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 RK+ ++G L+RV +A +G I ++ L + + Y +++ +I TG+ GEP + Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQS 308 Query: 309 L 309 L Sbjct: 309 L 309 >gi|77407175|ref|ZP_00784159.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77174217|gb|EAO77102.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 429 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 112/425 (26%), Positives = 192/425 (45%), Gaps = 8/425 (1%) Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM 195 I + HSIPE+M +V + GNIV+TGD+K D A TD L IG +G+LAL+ Sbjct: 7 ISFFKTTHSIPESMGIVXGTKEGNIVYTGDFKFDQAARKYYQTDLARLAEIGRDGVLALL 66 Query: 196 CDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 DS NA SE + I ++++A+G V+V +S++ RI+ + D A + GR++V Sbjct: 67 SDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQVFDAAAENGRRVV 126 Query: 256 LLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 L G ++ +V AI + I + + + + Y +L+++ TG GEP + L +++ Sbjct: 127 LTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGRMGEPINGLQKMA 186 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 G R V++ + D V + E + ++N + + G V + VSGH Sbjct: 187 IGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQN--LRVSGHANG 244 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPIEI 431 +L+ + ++P+ L I GE L AH LA + + V+ G ++ L D Sbjct: 245 RELQLLMNLLKPKYLFPIQGEYRDLSAHAGLAQEVGMSADDIYIVKRGDIMVLEKDGFFH 304 Query: 432 IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL-DNHYNIFGVPEIVDIGI 490 V G + DG IG ++ + R+ LS G V + + I + G Sbjct: 305 SGSVPAGDIMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKKIISKARVNTRGF 364 Query: 491 PAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTV 550 Y I + + V TTV D D L+ + + L ++P + Sbjct: 365 -VYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFLFDQTKRRPAILP 423 Query: 551 FINKI 555 + ++ Sbjct: 424 VVMEV 428 >gi|207091906|ref|ZP_03239693.1| conserved hypothetical ATP-binding protein [Helicobacter pylori HPKX_438_AG0C1] Length = 413 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 107/413 (25%), Positives = 209/413 (50%), Gaps = 6/413 (1%) Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 I ++ AL I++ G I+HTGD+K+D + TD L G +G++ L+ DSTN+ + Sbjct: 1 IIDSSALAIQTKAGTIIHTGDFKIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKS 60 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 GT SE I + K A+G V+++TFSS++ R+ I + RKI ++G S+++ Sbjct: 61 GTTPSESTIAPAFDTLFKEAQGRVIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKN 120 Query: 265 VSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + +A ++G I Q F+ YP +++++ TGSQGE SAL +++ E R++ + Sbjct: 121 LDIARELGYIHLPYQSFIEANEVAKYPDNEVLIVTTGSQGETMSALYRMATDEHRHISIK 180 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 D VI S++AIPGNE ++ + N L+++ +V ++ + +HVSGH + K M + I Sbjct: 181 PNDLVIISAKAIPGNEASVSAVLNFLIKKEAKVAYQEFD-NIHVSGHAAQEEQKLMLRLI 239 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 +P+ + +HGE H+ HK+ A+ G+ + + +G + + P I+ + + G Sbjct: 240 KPKFFLPVHGEYNHVARHKQTAISCGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSY 299 Query: 442 KDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGDGGKI 500 D + +R +++ G + + ++ + + + +G+ + D + Sbjct: 300 VDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNKQALLESSQFSSLGLVGF-KDEKPL 358 Query: 501 HKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 K + + + + K L + + +R L K + K P + ++ Sbjct: 359 MKEIQGGLEVLLKSSNAETLNNPKKLEDHTRNFIRKALFKKFRKYPAIICHVH 411 >gi|193216903|ref|YP_002000145.1| predicted hydrolase, metallo-beta-lactamase superfamily [Mycoplasma arthritidis 158L3-1] gi|193002226|gb|ACF07441.1| predicted hydrolase, metallo-beta-lactamase superfamily [Mycoplasma arthritidis 158L3-1] Length = 552 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 99/561 (17%), Positives = 220/561 (39%), Gaps = 21/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG+ E G N + K +I+ G P + G+D + + ++ K Sbjct: 3 KINFFALGGLDEKGKNSYVL----DIDGKLFIINAGTKVPINSHNGIDTLICNYDYLEKR 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +K+++ +F+T + A+ L + +Y S F + + ++ I Sbjct: 59 QKDIVGLFLTDVQNKSFSAIPWLLMKIKGLKIYTSAFNKIVTIDRISKYKIEHNDYEI-K 117 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G S+ + + S+P +A + GNI+ ++ D + TD + Sbjct: 118 AINKETHFGNVSVTPIDIAGSLPGQVAFNFHTNDGNILFLTNFV-DGNLGPYGQTDIARI 176 Query: 184 CAIGNEGIL-ALMCDSTNAMREGTCISEKGIKKNIY---DIMKNAKGCVLVTTFSSSVSR 239 L L+ DS + G I + + K I AK V+V + + Sbjct: 177 KQSFKNKPLKILIMDSGKSNYPGRSIDKLWVSKKIEYKFKEASAAKKRVIVGLYDEDMIT 236 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I+ +A++ ++ G + +++S+ V + F+ + E +++ T Sbjct: 237 AHEILVLAKRYNMPVITYGRTYSQLISLVKKVDNKLQWPEFIDYRAANDI--ESAVILVT 294 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G+ +++ +K+ + D VI I G EV H + + +I Sbjct: 295 GAIERLYLRFVRIATDHDIYLKIRKDDAVIVIVPPINGLEVNYAHTLDEIARNTSNLIE- 353 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVR 417 + + S +P D+K + + P+ + I G +LV + A + ++ Sbjct: 354 -LDSDQYYSCNPAKEDIKNFIKALSPKYFIPIQGLYRYLVVATQDARSVGMNVGNCIVLQ 412 Query: 418 NGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 NG++ + + + DGF +G + I +R L+ G ++++ L+D Sbjct: 413 NGRVAEFQDWNLTGQKHTIRNVGDVIIDGFGVGDISHEVIKERENLARDGIIALSCLIDY 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 P+I G+ D + ++ ++ + + + DL+ +++ + + Sbjct: 473 KKRTPINTPQITSYGVITKD-NKDVVYNIIQELFEKEFANKRSPKEIDLRDIQDKLRRGI 531 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + K K+P+V + + +I Sbjct: 532 RKKIYKAIEKEPMVIITLYEI 552 >gi|330723527|gb|AEC45897.1| hypothetical protein SRH_01670 [Mycoplasma hyorhinis MCLD] Length = 560 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 109/560 (19%), Positives = 222/560 (39%), Gaps = 22/560 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + +I+ G P + G+D V PD T+I + Sbjct: 3 KISFFALGGQDENGKNSYVLEI----DNSIFLINTGAKIPLSNSLGIDTVIPDFTYIEEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + IF+T + + AL L + + +Y S F L+ + ++S I Sbjct: 59 YSRVKGIFLTDVKNESFSALPWLIMKVPKIKIYCSSFTKALILERLTKYKISNNQYEIVS 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++ +++ SIP + G I+ ++ + + I T+ + L Sbjct: 119 LTKKIKIDDDVFVKPIQLAGSIPGIYGYNFETEDGLILFLSNFIVGNLGI-YGNTNLNYL 177 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLVTTFSSSVSR 239 ++ IL M DST A G I + KK + K ++V + + Sbjct: 178 KRSLESSKPILMAMIDSTRANYPGKTIDKIFAKKFLEKTFLTTKSTSRIIVGAYDEEMFS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVI 297 I+ I+D+A + RK+ + G + ++ + + + ++ + + +++ Sbjct: 238 IQEILDLAYKYKRKVAVYGRNYDNLLEMNQRLAQKQNLEIHYPEFFDFRQANKIDNSVIL 297 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 T + ++ + KL + D+VI + I G EV + + + + +++ Sbjct: 298 ITSTPERIYQRFFRILEKDDVFFKLKKTDSVIMLAPPINGMEVLHSRVLDEIAKVAKQLV 357 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPP 415 P D+ + + ++P+ + I G +LV + A + GI + Sbjct: 358 DITETQFYRTR--PSEEDIFEVLKALKPKFFIPIQGLYRYLVVAGKTAERAGINRENIII 415 Query: 416 VRNGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 ++N K+ + + G + DGF +G + I +R LS G + V LL Sbjct: 416 LQNRKVAFFLDGQLISQKHSIKNAGEVIVDGFGVGDISTEVIKEREALSRDGTIVVCALL 475 Query: 474 D-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD--LKLLRESI 530 D + I GI + K+ K++ + V T + + R D +K ++E I Sbjct: 476 DTKSKRLISELIINSYGIL-TKENKEKVSKIIHEVVYTHFSAVSKTRLSDNQVKEVQEKI 534 Query: 531 SSALRSLLKKVWGKKPLVTV 550 +++ + K K+P++ V Sbjct: 535 QKSIKRKIFKAIDKEPVIIV 554 >gi|293363581|ref|ZP_06610337.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] gi|292552930|gb|EFF41684.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] Length = 549 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 107/554 (19%), Positives = 232/554 (41%), Gaps = 22/554 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LGG+ E G NM + Y + + +I+ G P GVD + P+ ++ Sbjct: 2 NHLNLFALGGLDENGKNMYVLEY----NNEIYIINSGAKIPITSTNGVDTLIPNFEYLEN 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + IFIT + + AL L L ++ VY S F ++ + ++ + I Sbjct: 58 NKDRIKGIFITDVKNESFSALPWLLMSLKNIKVYTSSFNKIIIIDRLNKYKIDAQNYSIE 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 K +G+ + +++ S+ T+ + G+++ ++ + I G + ++ Sbjct: 118 I-INKKTKIGSLEVMPLQLAGSMMGTIGFDFITESGDVLFLFNFVEGNLGIYGRTSYEEI 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG--CVLVTTFSSSVSRI 240 IG +L+++ D+ + G I + G+ KN+ D+ AK +++ + ++ I Sbjct: 177 KKQIGARKVLSIVVDAGFSNYTGRAIDKIGLPKNVKDVFATAKNDERIIIGAYDEEMTSI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 I+D+A + R +V G + +++ + V + ++ +P +V+ TG Sbjct: 237 HEILDLAIKYNRPVVTYGKTYGQLLHLVKLVNSNLALPQIVDYKTISKHP--NAVVLVTG 294 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S +++ +KL + D VI + I G E + + +++ Sbjct: 295 AVERLYSRFLRITDNNDVFLKLKKTDIVIMIAPPINGLESLAAVALDEVARITPKIVEIS 354 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHL---VAHKELALQEGIACVPPVR 417 + P DL M + + P+ L+ G +L + + A + ++ Sbjct: 355 LN--EYYKHKPARQDLINMVKVLEPKYLIPAQGLYRYLVDVTRYVKNATKLKDNNCILLQ 412 Query: 418 NGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 NGK+ D + ++ V + DGF +G + I++R L G + ++VL + Sbjct: 413 NGKIAHFVDDKLFSVNGRVKPVGDTIIDGFGVGDISAEVISERETLGREGVILISVLYNP 472 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G +I IG+ + +I + + +I + + +D L+E + + Sbjct: 473 KSKELLGKIQINYIGV-IDKEEKKEISETINSIIIQVIRNEQFNGLRD---LQEKLRKTI 528 Query: 535 RSLLKKVWGKKPLV 548 R + K+ K+P+V Sbjct: 529 RKKVFKLTDKEPMV 542 >gi|319777698|ref|YP_004137349.1| hypothetical protein MfeM64YM_0977 [Mycoplasma fermentans M64] gi|4587468|gb|AAD25735.1|AF100324_3 unknown [Mycoplasma fermentans] gi|318038773|gb|ADV34972.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64] Length = 550 Score = 279 bits (714), Expect = 8e-73, Method: Composition-based stats. Identities = 98/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGG+ E G N ++ + + +I+ G P + GVD + P ++ K Sbjct: 2 NHINIFALGGLDENGKNCYVFEF----NDDIYIINSGTKIPINSNNGVDTLIPSFEYLEK 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + IFI+ + + AL L + ++ +Y S F ++ + ++ K + Sbjct: 58 HKDRIKGIFISDVKNESFSALPWLLMKIPNLTIYTSAFNKIMIMDRLSKYKIPTKNYKVM 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ + + S+P + +P G+I+ ++ D I G ++ + Sbjct: 118 VINKVTPFSDKLFVKPIDLAGSMPGHIGFDFITPDGDILFMFNFVEGDLGIYGKLSFNEL 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC--VLVTTFSSSVSRI 240 ILAL+ DS A G I + G+ + I D+ K ++V + + I Sbjct: 178 KQRFTKRKILALVVDSGKANFGGKAIEKIGLPEGIRDVFLETKKNERIIVGAYDEEMVAI 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 I+++A++ R +V G + ++ + K + + +++ TG Sbjct: 238 HKILELAQETSRPVVTYGKTYGQIFYLIKKAHPELKLPELIDYRNANKVK--NAVILVTG 295 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S +++ +KL + DTV+ + I G E + + ++ D Sbjct: 296 ATERLYSRFIRITDNNDVFLKLQKSDTVVMIAPPINGLESLEALTLDEIARITPKI--SD 353 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVPPVR 417 P DL + + P+ ++ + G +L + ++ Sbjct: 354 VNANEFYRCRPAKQDLIDLVNALNPEYVIPVQGLYRYLNEATIAISENTQVKQNHCLVMQ 413 Query: 418 NGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NGK++ + V + DGF +G + I++R L G + V+ + Sbjct: 414 NGKIVHFIDGKMSTTKGKVKEIGDTIIDGFGVGDISTEVISEREALGREGVILVSSQYNP 473 Query: 476 HYNIF-GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G +I +G+ + + ++ T++ + KD + A+ Sbjct: 474 KTKLLTGKLQINFVGV-INKEEKNEASDIIKSTIVKLIETESFNGIKD---FQNEARHAI 529 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + K + K+P+V V + +I Sbjct: 530 RKRIYKTFEKEPIVIVTLAQI 550 >gi|308190304|ref|YP_003923235.1| hydrolase [Mycoplasma fermentans JER] gi|307625046|gb|ADN69351.1| putative hydrolase [Mycoplasma fermentans JER] Length = 550 Score = 279 bits (713), Expect = 9e-73, Method: Composition-based stats. Identities = 98/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGG+ E G N ++ + + +I+ G P + GVD + P ++ K Sbjct: 2 NHINIFALGGLDENGKNCYVFEF----NDDIYIINSGTKIPINSNNGVDTLIPSFEYLEK 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + IFI+ + + AL L + ++ +Y S F ++ + ++ K + Sbjct: 58 HKDRIKGIFISDVKNESFSALPWLLMKIPNLTIYTSAFNKIMIMDRLSKYKIPTKNYKVM 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ + + S+P + +P G+I+ ++ D I G ++ + Sbjct: 118 VINKVTPFSDKLFVKPIDLAGSMPGHIGFDFITPDGDILFMFNFVEGDLGIYGKLSFNEL 177 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC--VLVTTFSSSVSRI 240 ILAL+ DS A G I + G+ + I D+ K ++V + + I Sbjct: 178 KQRFTKRKILALVVDSGKANFGGKAIEKIGLPEGIRDVFLETKKNERIIVGAYDEEMVAI 237 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 I+++A++ R +V G + ++ + K + + +++ TG Sbjct: 238 HKILELAQETSRPVVTYGKTYGQIFYLIKKAHPELKLPELIDYRNANKVK--NAVILVTG 295 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S +++ +KL + DTV+ + I G E + + ++ D Sbjct: 296 ATERLYSRFIRITDNNDVFLKLQKSDTVVMIAPPINGLESLEALTLDEIARITPKI--SD 353 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVPPVR 417 P DL + + P+ ++ + G +L + ++ Sbjct: 354 VNANEFYRCRPAKQDLIDLVNALNPEYVIPVQGLYRYLNEATIAISENTQVKQNHCLVMQ 413 Query: 418 NGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NGK++ + G + DGF +G + I++R L G + V+ + Sbjct: 414 NGKIVHFIDGKMATTKGKVKEIGDTIIDGFGVGDISTEVISEREALGREGVILVSSQYNP 473 Query: 476 HYNIF-GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G +I +G+ + + ++ T++ + KD + A+ Sbjct: 474 KTKLLTGKLQINFVGV-INKEEKNEASDIIKSTIVKLIETESFNGIKD---FQNEARHAI 529 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + K + K+P+V V + +I Sbjct: 530 RKRIYKTFEKEPIVIVTLAQI 550 >gi|291320667|ref|YP_003515932.1| hypothetical protein MAGa7770 [Mycoplasma agalactiae] gi|290753003|emb|CBH40979.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 557 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 107/559 (19%), Positives = 227/559 (40%), Gaps = 21/559 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPS--SRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + LGG+ E G N + ++K +I+ G P + +D + P+ ++ Sbjct: 2 NHINIFALGGLDENGKNCYILETFDEKGENKKIYVINSGAKVPINSSNKIDTLIPNFNYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPC 120 +K + + +F+T D + AL L + VPVY S F L+ + ++ K Sbjct: 62 IKNKDAIQGVFVTDVKNDSFSALPWLLMKMPTVPVYTSKFNKVLIMERLSKYKLDLKKVK 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD-VTD 179 I+ VG + + + S+P + L +P G+ + ++ + I G+ D Sbjct: 122 INILDR-PTKVGDIFVNPIELAGSMPGHIGLDFITPSGDYLFMFNFVEANLGIYGNLDFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSV 237 + I AL+ DS N+ + + + +N+ + +A ++V + + Sbjct: 181 EMPKKFFAKRKIKALIVDSGNSNQNCRAADKIVLPRNVREAFFSARPDQRIIVGAYDEEM 240 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 I I+D A + R ++ G + +V+S+ V + L + +++ Sbjct: 241 YSISQILDFAYEAKRPVIAYGKTYGQVLSLIKSVVPDLRLPKVLDYKYANKVK--NAVIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+ S A+++ +KL E DTVI + AI G E + + + +V+ Sbjct: 299 VTGTVERLHSRFARITDNNDVYLKLQESDTVIMIAPAINGLESLEAVVLDDIARVSPKVM 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVP 414 + H HP DL ++ ++P+ ++ + G +L + ++ V Sbjct: 359 ELNNFEFFH--HHPAREDLAKLINILKPEYVIPVQGLYRYLQDAQRYIVKNVGFNSKNVL 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++NG++ + + + DGF +G + +R L G + V + Sbjct: 417 VLQNGQVAHFDNGKLGSYKRKIKEVGDVIVDGFGVGDINTEVLNEREVLGREGVVLVAIR 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + I G +I +G+ + + + L+ T++ + + + L+ + Sbjct: 477 YNPIKKKIVGKVQINTVGVISKEEKSEA-NDLIKATLLNVIE---GKKFESLREFQNVCR 532 Query: 532 SALRSLLKKVWGKKPLVTV 550 A+R + KV+ K+P+V V Sbjct: 533 QAIRKRIFKVFSKEPIVVV 551 >gi|301165442|emb|CBW25013.1| putative beta-lactamase family protein [Bacteriovorax marinus SJ] Length = 542 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 150/559 (26%), Positives = 257/559 (45%), Gaps = 23/559 (4%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M E L P+GGVG+IG NM + + I++D G+ FP +D ++ + PD++ Sbjct: 1 MTKELLKIQPVGGVGQIGSNMTRF----VTENDNIIVDAGILFPSEDFFDINYLIPDLSE 56 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + ITH HEDH GA+ + + ++A FA L+ K Y +VSK I Sbjct: 57 LTNNP--PTHLLITHGHEDHIGAIIHVIDKFPEIIIWAPKFAALLMRKKLDYAKVSKNIL 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI--VHTGDWKLDDDAILGDV 177 + ++ + + VNHSIP+T L+ + + D+K+D+ + Sbjct: 115 --EYDHNTVLEFNDLCVHPIHVNHSIPDTYGLLFKDNKKRFSTLIVSDFKIDNRSPYERE 172 Query: 178 TDKDSLCAIGNE-GILALMCDSTNAMREG-TCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D L ++ + ++ DSTN + SE + N +I K + +T FSS Sbjct: 173 FDFKKLKSLSKDCEKRVILADSTNILSTNLETPSEGDVLHNFKNIFKKDYENIYLTCFSS 232 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V RI S I A++ GR+++L G S+ +VA + GI+ + ++ L +++++ Sbjct: 233 NVHRIASAITAAKESGRRVLLYGRSMINYAAVAAECGILNESDYYID--QASLPNKKKVV 290 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 VI +G QG+ R + ++++GE + K KD + SS+AIPGNE I ++N + EQG+ Sbjct: 291 VILSGCQGDFRGSFRRVAKGEDTHFKPTTKDLFVISSKAIPGNEKKISLLENEITEQGID 350 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 +I + +HVSGHP NDL ++YQ P +V IHGE L L H E Sbjct: 351 II-STRDELIHVSGHPGRNDLAKLYQEYLPDYIVPIHGESLFLKKHIEFIDSLNSNAQAI 409 Query: 416 -VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 + N L + + + + + I+ RR+LS G + +++ D Sbjct: 410 HISNFDELSINNRLEIEVQKTTPLRPILIHGKAIEIEREHISVRRKLSNQGAIFLSIKTD 469 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + E G+P + D + + L+ +L + K L+ + I + Sbjct: 470 SLLKRKIQYEYSFFGLPNFFNDDKEDFEYLIN------SELSGRKVKLLEKTADEIRIII 523 Query: 535 RSLLKKVWGKKPLVTVFIN 553 R G KP+ V Sbjct: 524 RRYAHNRLGYKPVTVVHFV 542 >gi|238810239|dbj|BAH70029.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 558 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 98/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGG+ E G N ++ + + +I+ G P + GVD + P ++ K Sbjct: 10 NHINIFALGGLDENGKNCYVFEF----NDDIYIINSGTKIPINSNNGVDTLIPSFEYLEK 65 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + IFI+ + + AL L + ++ +Y S F ++ + ++ K + Sbjct: 66 HKDRIKGIFISDVKNESFSALPWLLMKIPNLTIYTSAFNKIMIMDRLSKYKIPTKNYKVM 125 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ + + S+P + +P G+I+ ++ D I G ++ + Sbjct: 126 VINKVTPFSDKLFVKPIDLAGSMPGHIGFDFITPDGDILFMFNFVEGDLGIYGKLSFNEL 185 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC--VLVTTFSSSVSRI 240 ILAL+ DS A G I + G+ + I D+ K ++V + + I Sbjct: 186 KQRFTKRKILALVVDSGKANFGGKAIEKIGLPEGIRDVFLETKKNERIIVGAYDEEMVAI 245 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 I+++A++ R +V G + ++ + K + + +++ TG Sbjct: 246 HKILELAQETSRPVVTYGKTYGQIFYLIKKAHPELKLPELIDYRNANKVK--NAVILVTG 303 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S +++ +KL + DTV+ + I G E + + ++ D Sbjct: 304 ATERLYSRFIRITDNNDVFLKLQKSDTVVMIAPPINGLESLEALTLDEIARITPKI--SD 361 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVPPVR 417 P DL + + P+ ++ + G +L + ++ Sbjct: 362 VNANEFYRCRPAKQDLIDLVNALNPEYVIPVQGLYRYLNEATIAISENTQVKQNHCLVMQ 421 Query: 418 NGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NGK++ + V + DGF +G + I++R L G + V+ + Sbjct: 422 NGKIVHFIDGKMSTTKGKVKEIGDTIIDGFGVGDISTEVISEREALGREGVILVSSQYNP 481 Query: 476 HYNIF-GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G +I +G+ + + ++ T++ + KD + A+ Sbjct: 482 KTKLLTGKLQINFVGV-INKEEKNEASDIIKSTIVKLIETESFNGIKD---FQNEARHAI 537 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 R + K + K+P+V V + +I Sbjct: 538 RKRIYKTFEKEPIVIVTLAQI 558 >gi|148377943|ref|YP_001256819.1| hypothetical protein MAG_6810 [Mycoplasma agalactiae PG2] gi|148291989|emb|CAL59381.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 556 Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats. Identities = 106/558 (18%), Positives = 226/558 (40%), Gaps = 21/558 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPS--SRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + LGG+ E G N + ++K +I+ G P + +D + P+ ++ Sbjct: 2 NHINIFALGGLDENGKNCYILETFDEKGENKKIYVINSGAKVPINSSNKIDTLIPNFNYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPC 120 +K + + +F+T D + AL L + VPVY S F L+ + ++ K Sbjct: 62 IKNKDAIQGVFVTDVKNDSFSALPWLLMKMPTVPVYTSKFNKVLIMERLSKYKLDLKKVK 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD-VTD 179 I+ VG + + + S+P + L +P G+ + ++ + I G+ D Sbjct: 122 INILDR-PTKVGDIFVNPIELAGSMPGHIGLDFITPSGDYLFMFNFVEANLGIYGNLDFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSV 237 + I AL+ DS N+ + + + +N+ + +A ++V + + Sbjct: 181 EMPKKFFAKRKIKALIVDSGNSNQNCRAADKIVLPRNVREAFFSARPDQRIIVGAYDEEM 240 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 I I+D A + R ++ G + +V+S+ V + L + +++ Sbjct: 241 YSISQILDFAYEAKRPVIAYGKTYGQVLSLIKSVVPDLRLPKVLDYKYANKVK--NAVIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+ S A+++ +KL E DTVI + AI G E + + + +V+ Sbjct: 299 VTGTVERLHSRFARITDNNDVYLKLQENDTVIMIAPAINGLESLEAVVLDDIARVSPKVM 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVP 414 + H HP DL ++ ++P+ ++ + G +L + ++ V Sbjct: 359 ELNNFEFFH--HHPAREDLAKLINILKPEYVIPVQGLYRYLQDAQRYIVKNVGFNSKNVL 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++NG++ + + + DGF +G + +R L G + V + Sbjct: 417 VLQNGQVAHFDNGKLGSYKRKIKEVGDVIVDGFGVGDINTEVLNEREVLGREGVVLVAIR 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + I G +I +G+ + + + L+ T++ + + + L+ + Sbjct: 477 YNPIKKKIVGKVQINTVGVISKEEKSEA-NDLIKATLLNVIE---GKKFESLREFQNVCR 532 Query: 532 SALRSLLKKVWGKKPLVT 549 A+R + KV+ K+P+V Sbjct: 533 QAIRKRIFKVFSKEPIVV 550 >gi|269115144|ref|YP_003302907.1| hypothetical protein MHO_3690 [Mycoplasma hominis] gi|268322769|emb|CAX37504.1| Conserved hypothetical protein [Mycoplasma hominis ATCC 23114] Length = 551 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 98/562 (17%), Positives = 226/562 (40%), Gaps = 22/562 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG+ E G N + + K +I+ G P + G+D + + F+ K Sbjct: 2 NKINFFALGGLDENGKNCYVLEI----NNKLFVINSGTKIPINSHNGIDTLICNYEFLEK 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +K++ +F+T + + A+ L + ++ +Y S F L + + + Sbjct: 58 RQKDIEGLFLTDVRNETFSAIPWLLMKIKNLKIYTSAFNKIFLLDRISKYNIGSNTFEV- 116 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 K G ++ + +P + +P+ NI+ ++ D D TD Sbjct: 117 KTINKKTAFGGVNVTPFDLAGGLPGQLGFNFETPISNILFMTNFV-DGDLGPYGKTDLQQ 175 Query: 183 LCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSVS 238 + I N + L+ DS+ + G I + + + I K ++V + + Sbjct: 176 IQQIINNKKELQLLIMDSSRSAFPGRSIEKLWVSRKIEYKFKETSDNQRIIVGLYDEDMI 235 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 I+ +A++ R ++ G + +++ + V + F+ ++ +++ Sbjct: 236 TAHEILILAKRYNRPVITYGLAYSQLIKLVEKVNPNSQFPEFVEYQTANNVK--NAVILV 293 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+ + A++S +KL D VI + + G EV + + +I Sbjct: 294 TGAIDRLYTRFARISSDNDVYLKLKNDDAVIIIAPPVNGLEVNYAITLDDIARHTANLIE 353 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPV 416 + + S +P D+ + + ++P+ + I G + V ++A I+ + Sbjct: 354 LGNDQ--YYSCNPAKLDIFNIIKALKPKFFIPIQGLYRYQVVATQVARSAGMNISNCLVL 411 Query: 417 RNGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NGK+ + + G + DG+ IG + I +R L+ G ++++ L+D Sbjct: 412 QNGKVAEFNDTNLISQKHGIRNVGDVIIDGYGIGDISHEVINERENLARDGVIALSSLID 471 Query: 475 -NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 +I GI D ++ ++ + + Q + +LK ++E + + Sbjct: 472 YKKKKPINELQISSYGIIT--KDNKEVIHKIINDLFKKEFENKQTKEINLKEIQEKLRKS 529 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 ++ + K K+P++ + + +I Sbjct: 530 IKRKIAKTIDKEPMIVITLYEI 551 >gi|313678818|ref|YP_004056558.1| hypothetical protein MBOVPG45_0778 [Mycoplasma bovis PG45] gi|312950499|gb|ADR25094.1| conserved hypothetical protein [Mycoplasma bovis PG45] Length = 557 Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 107/562 (19%), Positives = 228/562 (40%), Gaps = 21/562 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPS--SRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + LGG+ E G N ++ ++K +I+ G P + +D + P+ ++ Sbjct: 2 NHINIFALGGLDENGKNCYVFETFDDKGENKKIYVINSGAKIPINSNNKIDTLIPNFNYL 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPC 120 +K + + +F+T D + AL L + VPV+ S F L+ + ++ K Sbjct: 62 IKNKDAIQGVFVTDVKNDSFSALPWLLMKMPTVPVFTSKFNKVLIMERLSKYKLDLKKVK 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD-VTD 179 I+ +G + + + S+P + L +P G+ + ++ + I G D Sbjct: 122 INILDR-PTKIGDIFVNPIELAGSMPGHIGLDFITPSGDYLFMFNFVEANLGIYGSLDFD 180 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLVTTFSSSV 237 + I AL+ DS N+ + + + +++ + +AK ++V + + Sbjct: 181 EMPRKFFAKRKIKALIVDSGNSNQNCRAADKIILPRSVREAFFSAKPNERIIVGAYDEEM 240 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 I I+D A + R ++ G + +V+S+ V K L + +++ Sbjct: 241 YSISQILDFAYEAKRPVIAYGKTYGQVLSLIKSVVPDLKLPKILDYKYANKVK--NAVIL 298 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 TG+ S A+++ +KL E DTVI + AI G E + + + +V+ Sbjct: 299 VTGTVERLHSRFARITDNNDVYLKLQESDTVIMIAPAINGLESLEAVVLDDIARVSPKVM 358 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE---GIACVP 414 + H HP DL ++ ++P+ +V G +L + ++ V Sbjct: 359 ELNNFEFFH--HHPAREDLAKLINILKPEYVVPAQGLYRYLQDAQRYIVKNVGFNPKNVL 416 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 ++NG++ + + + DGF +G + +R L G + V V Sbjct: 417 LLQNGQIAHFDNGKLGSYKRKIKEVGDVIVDGFGVGDINTEVLNEREVLGREGVVLVAVR 476 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + + G +I +G+ + D + L+ T++ + + + L+ + Sbjct: 477 YNPIKKKLIGKIQINTVGVISKDEKSEA-NDLVKSTLLNVIES---KKFESLREFQNVCR 532 Query: 532 SALRSLLKKVWGKKPLVTVFIN 553 A+R + K++ K+P+V V + Sbjct: 533 QAIRKKIFKIYSKEPIVVVSVV 554 >gi|255016998|ref|ZP_05289124.1| hypothetical protein LmonF_02778 [Listeria monocytogenes FSL F2-515] Length = 278 Score = 276 bits (706), Expect = 7e-72, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 4/269 (1%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + R H+IP+++ +V+ + G+IV+TGD+K D A G +D + G + Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEK 188 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G+LAL+ DS+ A GT S+ I++ I + A G ++V +S++ R++ ++D + Sbjct: 189 GVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVA 248 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 RK+ ++G L+RV +A +G I ++ Sbjct: 249 TKRKVAIVGKELERVFEIAGSLGKIVIEE 277 >gi|71894657|ref|YP_278765.1| hypothetical protein MS53_0647 [Mycoplasma synoviae 53] gi|71851445|gb|AAZ44054.1| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 557 Score = 272 bits (696), Expect = 1e-70, Method: Composition-based stats. Identities = 96/558 (17%), Positives = 228/558 (40%), Gaps = 26/558 (4%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E G N + + +I+ GV P + GVD + P+ ++ + + Sbjct: 4 INLFALGGQDENGKNCYVLEH----QADIFIINVGVKIPINSTNGVDALIPNFEYLTQRK 59 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +FIT+ D++ A+ L + ++ +Y S + ++ + +S Sbjct: 60 NRIQGVFITNVKNDNFSAIPWLVMKIPNLKIYTSSYNKTIVINRLNKYNISP-SQYKVIA 118 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++ I+++ V+ SIP +A + + G+ + ++ D G++ K+ L Sbjct: 119 FDKDLEFKNLKIQAIPVSGSIPGNLAFLFKLEFGSFLFMFNYVEGDLKYFGNLNYKNLLA 178 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK---NAKGCVLVTTFSSSVSRIR 241 + N+ ++ L+ +S + T +S + I ++ K ++ ++V ++ + + Sbjct: 179 KLDNKPLVGLITNSGQSNYPATAMSRLNLPDYIENVFKESIDSNYQIVVGSYDEEMVNLD 238 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 II++ ++ +KIV+ G + ++++ + L + + + +++ TG Sbjct: 239 QIINLCKKYNKKIVIYGRTYANLLNLLSKTNLEFGSSLPEILDHKTIKKHKDCVILFTGK 298 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 ++ E +KL VI + I G E + +++ + + + + Sbjct: 299 LTRLYKRFQRVLDNEDAYLKLKSDHRVIMMAPPINGTESLYASLLDQIAKVTPYIW-DVS 357 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP-----PV 416 + + S P DL + +RP+ + + G +L+ + Sbjct: 358 DLELFRSN-PTKEDLSNLLFALRPKYFLPVAGLYRYLIDSSNYLKDSAKQNKFNFDSLVL 416 Query: 417 RNGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 +NG + R D + G + DGF +G + +++R L G + +NVL Sbjct: 417 QNGAIARFEDDKLINSNAKIKEVGETIIDGFGVGDISSEIVSERETLGREGAIIINVLYS 476 Query: 475 NH----YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESI 530 + I +I G+ + + + I KL+ T++ + + + K +K L + + Sbjct: 477 SKPNKPKMILDEIQIDFTGVTS-EENFDDIKKLIKATIVKII---SKEKFKSIKELNKRL 532 Query: 531 SSALRSLLKKVWGKKPLV 548 ++R + K K +V Sbjct: 533 RKSVRKKIFKTTDKDSVV 550 >gi|294155887|ref|YP_003560271.1| hypothetical protein MCRO_0667 [Mycoplasma crocodyli MP145] gi|291600091|gb|ADE19587.1| conserved hypothetical protein [Mycoplasma crocodyli MP145] Length = 549 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 108/554 (19%), Positives = 234/554 (42%), Gaps = 22/554 (3%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGG+ E G NM + + + + +I+ G P GVD + P+ ++ K Sbjct: 2 NHINLFALGGLDENGKNMYVLEF----NDEIFIINSGAKIPISSTNGVDTLIPNFEYLEK 57 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + IFIT + + AL L L V VY S F ++ + ++ + + Sbjct: 58 NKSKIKGIFITDVKNESFSALPWLLMSLQGVKVYTSSFNKIIIIDRLNKYKIEQSSYEVE 117 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + VG+ + S+++ S+ T+ L +P G+++ ++ D I G + +D Sbjct: 118 T-LNKRTKVGSIFVNSLQLAGSMMGTIGLDFETPDGDVIFIFNFVEGDLGIYGKTSYEDI 176 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSVSRI 240 ++ +LAL+ D+ + G I + G+ KNI ++ + A K +++ + ++ I Sbjct: 177 KKSLMKRNLLALVADAGYSNYSGRAIDKIGLPKNIKNVFETATEKERIIIGAYDEEMASI 236 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 I+D+A + R +V G + +++ + V + + + ++ +P +++ TG Sbjct: 237 HEILDLARKHNRPVVTYGKTYGQLLHLVKLVNPTLELPVIVDYKTISKHP--NAVILVTG 294 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S +++ +KL + D VI + I G E + + +++ Sbjct: 295 AVERLYSRFLRITDNNDVFLKLKKTDIVIMIAPPINGLESLAAVALDDVARITPKIVEVS 354 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL---QEGIACVPPVR 417 + + P DL + + P+ L+ + G +LV + ++ Sbjct: 355 LD--EYYKHKPARQDLINLVNTLDPKYLIPVQGLYRYLVDVSRYVKKATKITDNSCIILQ 412 Query: 418 NGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 NGK+ D + ++ + + DGF +G + I +R L G + ++VL + Sbjct: 413 NGKIAHFVGDKLFSVNGKIKPVGDTIIDGFGVGDISPEVITERESLGREGIILISVLYNP 472 Query: 476 H-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + G I +G+ + I + + +I T+ +D L+E + + Sbjct: 473 RIKEMVGKIHINFVGV-IDKEEKVLITETINSIIIQTIRAEKFNGLRD---LQERLRKII 528 Query: 535 RSLLKKVWGKKPLV 548 R + K+ K+P+V Sbjct: 529 RKKVFKITDKEPMV 542 >gi|167957347|ref|ZP_02544421.1| predicted hydrolase [candidate division TM7 single-cell isolate TM7c] Length = 412 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 116/323 (35%), Positives = 178/323 (55%), Gaps = 13/323 (4%) Query: 5 ELVFLPLGGVGE--IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L +P+GG+GE IG NM Y + ++ID G FP D PG++ + PDIT+++ Sbjct: 94 KLKVMPIGGLGEMGIGKNMMAIEY----DNEILIIDMGFLFPGSDYPGINYITPDITYLL 149 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + TH H DH GA L + PVYAS F IG+L+ K Sbjct: 150 ERKHMIRGVVFTHGHLDHIGAFRHLIPQIPAPVYASKFTIGMLKRTMEESDSGYKPDYYE 209 Query: 123 FQA--GDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ +G F+IE VRVNHSIP++ A+VIR+PVG +V TGDW+ +++ + G D Sbjct: 210 LNPEAHERAQIGDSFNIELVRVNHSIPDSTAVVIRTPVGVLVDTGDWRFEENPVDGRKFD 269 Query: 180 KDSLCAIG-NEGILALMCDSTNAMREG-TCISEKGIKKNIYDIM-KNAKGCVLVTTFSSS 236 D + I EGIL LM +STN EG E I+++I +M K ++++ FSS Sbjct: 270 LDRMTEIATKEGILLLMNESTNCESEGTHTHGEPEIQQSISQVMDKYQNNRLIISAFSSQ 329 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLI 295 + RI+ I++ A++ GRKI L G S+ + + VA+ G IK + E P ++ Sbjct: 330 IHRIQGIMEEAKKHGRKIALAGYSMLQNLEVALRTGTIKVPKDTIVKMEDIVKLPDGKVT 389 Query: 296 VIATGSQGEPRSALAQLSRGEMR 318 +I TGSQGE + L +++ G R Sbjct: 390 IICTGSQGEFNAVLNRMASGAHR 412 >gi|77405393|ref|ZP_00782487.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77175975|gb|EAO78750.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 329 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 156/296 (52%), Gaps = 7/296 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNEQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLYPREQLIVI 297 D A + GR++VL G ++ +V AI + I + + + + Y +L+++ Sbjct: 239 FDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLIL 294 >gi|325911989|ref|ZP_08174391.1| ribonuclease J 1 family protein [Lactobacillus iners UPII 143-D] gi|325476174|gb|EGC79338.1| ribonuclease J 1 family protein [Lactobacillus iners UPII 143-D] Length = 311 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 6/314 (1%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQFFA 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCI 121 + IF+TH H D GAL + +PV+ S I L + + Sbjct: 58 DYGDRVAGIFLTHGHADAIGALPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFH 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++D +I + HS+P+++ + + + G IV+TGD+K D A D Sbjct: 118 VIDEDTEIDFNNVTISFFKTTHSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFV 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L I +G+LAL+ DSTN+ + I+K I ++ KN G ++V + +S++ R++ Sbjct: 178 RLADISRKGVLALLSDSTNSESVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATG 300 I A RK+ L G + R+V A+ +G + + + + P + ++++ TG Sbjct: 238 EIFQAAAATERKVFLTGRDIGRIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETG 297 Query: 301 SQGEPRSALAQLSR 314 GEP +L + Sbjct: 298 RMGEPLKSLQKNGN 311 >gi|188518340|ref|ZP_03003853.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188997964|gb|EDU67061.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 560 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 97/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ FL LGG E G + + + + + G P D+ GV+++ D +++ K Sbjct: 3 KINFLSLGGQDERGKSCFVLE----VNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK---IP 119 K + IFI ++ + L + +P+Y SP +++ K ++V+ K Sbjct: 59 AKRVKGIFIGTPTFNNVMGIKLLLAQVGYKIPIYTSPIGAIVVK-KIFEQKVNNKKIEPN 117 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G+ + + +V++S+P + V+++ G IV+ ++ + +D + Sbjct: 118 IIELDPISDKKIGSIYVTAFKVSNSMPHSYGFVLKTSDGAIVYIDEFIISNDKNKTFDSQ 177 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++L I LAL+ A K I++N K ++V +S+ Sbjct: 178 INALNNITKNNTLALIVGMGQAGNPCFTAPNHKNKGFYESILQNTKNRLIVGCYSNDAYS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I ++ IA+Q R ++ ++ + + + + +S + + I++ Sbjct: 238 IFTLATIAKQQNRPFIVYSNNFINTFVGVLKL-KLFNSKNLISLPVSEINNSKNAIIVVI 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +Q L ++ E +++ L +D ++ PG E+ + + + + A Sbjct: 297 ENQDTLFPRLNKILHNEDKHITLTSEDQLVLGVVITPGFEMLAAQLSDEVGRLDIPYKAL 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + DLK + +++P+ L+ I+G V I + Sbjct: 357 P---KTVLPMTQSDEDLKHLINFLQPKYLIPINGLYKTEVKFTSTVTTSWIKSDQIISIS 413 Query: 420 K--MLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + + + +V+ F + +R Q+ G +++ V+ D Sbjct: 414 NGELFSIKDKVLNPKPQVIELEDKYISSFDALDVGANILFERAQMGENGVINLIVIFDKQ 473 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLP---QFRRKDLKLLRESISS 532 +F E G+ D K + +T + + +R LK + S+ Sbjct: 474 FQKLFNYVEFDYCGVVNDDPQVRAQVKEIEETFKKRMGECLVYDDRKRLVLKDTKASLKR 533 Query: 533 ALRSLLKKVWGKKPLVTVFIN 553 L L +K + K+PLV + Sbjct: 534 LLTKLFEKKFNKRPLVLPTVV 554 >gi|171920612|ref|ZP_02931860.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179017|ref|ZP_02964767.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188023996|ref|ZP_02996757.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195867926|ref|ZP_03079924.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273321|ref|ZP_03205857.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554147|ref|YP_002284956.1| hypothetical protein UUR10_0591 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550325|ref|ZP_03771274.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551263|ref|ZP_03772209.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903323|gb|EDT49612.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209107|gb|EDU06150.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019021|gb|EDU57061.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195660403|gb|EDX53662.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249841|gb|EDY74621.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541648|gb|ACI59877.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379078|gb|EEH01443.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379479|gb|EEH01841.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 560 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 97/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ FL LGG E G + + + + + G P D+ GV+++ D +++ K Sbjct: 3 KINFLSLGGQDERGKSCFVLE----VNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK---IP 119 K + IFI ++ + L + +P+Y SP +++ K ++V+ K Sbjct: 59 AKRVKGIFIGTPTFNNVMGIKLLLAQVGYKIPIYTSPIGAIVVK-KIFEQKVNNKKIEPN 117 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G+ + + +V++S+P + V+++ G IV+ ++ + +D + Sbjct: 118 IIELDPISDKKIGSIYVTAFKVSNSMPHSYGFVLKTSDGAIVYIDEFIISNDKNKTFDSQ 177 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++L I LAL+ A K I++N K ++V +S+ Sbjct: 178 INALNNITKNNTLALIVGMGQAGNPCFTAPNHKNKGFYESILQNTKNRLIVGCYSNDAYS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I ++ IA+Q R ++ ++ + + + + +S + + I++ Sbjct: 238 IFTLATIAKQQNRPFIVYSNNFINTFVGVLKL-KLFNSKNLISLPVSEINNSKNAIIVVI 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +Q L ++ E +++ L +D ++ PG E+ + + + + A Sbjct: 297 ENQDTLFPRLNKILHNEDKHITLTSEDQLVLGVVITPGFEMLAAQLSDEVGRLDIPYKAL 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + DLK + +++P+ L+ I+G V I + Sbjct: 357 P---KTVLPMTQSDEDLKHLINFLQPKYLIPINGLYKTEVKFTSTVTTSWIKSDQIISIS 413 Query: 420 K--MLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + + + +V+ F + +R Q+ G +++ V+ D Sbjct: 414 NGELFSIEDKVLNPKPQVIELEDKYISSFDALDVGANILFERAQMGENGVINLIVIFDKQ 473 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLP---QFRRKDLKLLRESISS 532 +F E G+ D K + +T + + +R LK + S+ Sbjct: 474 FQKLFNYVEFDYCGVVNDDPQVRAQVKEIEETFKKRMGECLVYDDRKRLVLKDTKASLKR 533 Query: 533 ALRSLLKKVWGKKPLVTVFIN 553 L L +K + K+PLV + Sbjct: 534 LLTKLFEKKFNKRPLVLPTVV 554 >gi|188524305|ref|ZP_03004343.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195659891|gb|EDX53271.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] Length = 560 Score = 259 bits (662), Expect = 8e-67, Method: Composition-based stats. Identities = 96/561 (17%), Positives = 215/561 (38%), Gaps = 21/561 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ FL LGG E G + + + + + G P D+ GV+++ D +++ K Sbjct: 3 KINFLSLGGQDERGKSCFVLE----VNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK---IP 119 K + IFI ++ + L + +P+Y SP +++ K ++V+ K Sbjct: 59 AKRVKGIFIGTPTFNNVMGIKLLLAQVGYKIPIYTSPIGAIVVK-KIFEQKVNNKKIEPN 117 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G+ + + +V++S+P + V+++ G IV+ ++ + +D + Sbjct: 118 IIELDPISDKKIGSIYVTAFKVSNSMPHSYGFVLKTSDGAIVYIDEFIISNDKNKTFDSQ 177 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 ++L I LAL+ A K I++N K +++ +S+ Sbjct: 178 INALNNITKNNTLALIVGMGQAGNPCFTAPNHKNKGFYESILQNTKNRLILGCYSNDAYS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I ++ IA+Q R ++ ++ + + + + +S + + I++ Sbjct: 238 IFTLATIAKQQNRPFIVYSNNFINTFVGVLKL-KLFNSKNLISLPVSEINNSKNAIIVVI 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +Q L ++ E +++ L +D ++ PG E+ + + + + A Sbjct: 297 ENQDTLFPRLNKILHNEDKHITLTSEDQLVLGVVITPGFEMLAAQLSDEVGRLDIPYKAL 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + DLK + +++P+ L+ I+G V I + Sbjct: 357 P---KTVLPMTQSDEDLKHLINFLQPKYLIPINGLYKTEVKFTSTVTTSWIKSDQIISIS 413 Query: 420 K--MLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + + + +V+ F + +R Q+ G +++ V+ D Sbjct: 414 NGELFSIEDKVLNPKPQVIELEDKYISSFDALDVGANILFERAQMGENGVINLIVIFDKQ 473 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLP---QFRRKDLKLLRESISS 532 +F E G+ D K + +T + + +R LK + S+ Sbjct: 474 FQKLFNYVEFDYCGVVNDDPQVRAQVKEIEETFKKRMGECLVYDDRKRLVLKDTKASLKR 533 Query: 533 ALRSLLKKVWGKKPLVTVFIN 553 L L +K + K+PLV + Sbjct: 534 LLTKLFEKKFNKRPLVLPTVV 554 >gi|13358072|ref|NP_078346.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762269|ref|YP_001752593.1| hypothetical protein UPA3_0539 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508582|ref|ZP_02958097.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701870|ref|ZP_02971529.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356760|pir||B82882 conserved hypothetical ATP/GTP-binding protein UU509 [imported] - Ureaplasma urealyticum gi|6899509|gb|AAF30921.1|AE002149_6 conserved hypothetical ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827846|gb|ACA33108.1| conserved hypothetical protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182676035|gb|EDT87940.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701175|gb|EDU19457.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 556 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 99/558 (17%), Positives = 214/558 (38%), Gaps = 19/558 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ FL LGG E G + + + + + G P D+ GV+++ D +++ K Sbjct: 3 KINFLSLGGQDERGKSCFVLE----VNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK---IP 119 K + IFI ++ + L +P+Y SP +++ K ++V+ K Sbjct: 59 AKRVKGIFIGTPTFNNVMGIKLLLGQVGYKIPIYTSPIGAIVIK-KIFEQKVNNKKIEPN 117 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G+ + S +V++S+P + V+++ G IV+ ++ + +D + Sbjct: 118 IIELDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVYVDEFIISNDKNKTFDSQ 177 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L I LAL+ A K ++N K ++V +S+ Sbjct: 178 INLLNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I ++ IA+Q R ++ ++ + + + + +S + + I++ Sbjct: 238 IFTLATIAKQQNRPFIVYSNNFINTFIGVLKL-KLFNSKNLISLPVSEINNSKNAIIVVI 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +Q S L ++ E + V L+ D +I PG E+ + + + + A Sbjct: 297 ENQDTLFSKLNKILHNEDKYVNLSSDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKAL 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + DLK + +++P+ L+ I+G V I + Sbjct: 357 P---KTVLPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVTTSWIKSDQIISVS 413 Query: 420 K--MLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + + + +++ F + +R Q+ G +++ V+ D Sbjct: 414 NGELFTIEDKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQ 473 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 +F E G+ D +I + K + +V + +R LK + ++ L Sbjct: 474 FQKLFNYVEFDYCGVVNNDAQIKEIEETFKKRMGECLV-YDERKRLILKDTKANLKRLLT 532 Query: 536 SLLKKVWGKKPLVTVFIN 553 L +K + K+PLV + Sbjct: 533 KLFEKKFNKRPLVLPTVV 550 >gi|171920112|ref|ZP_02931525.1| conserved hypothetical protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902474|gb|EDT48763.1| conserved hypothetical protein [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 556 Score = 256 bits (654), Expect = 7e-66, Method: Composition-based stats. Identities = 98/558 (17%), Positives = 213/558 (38%), Gaps = 19/558 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ FL LGG E G + + + + + G P D+ GV+++ D +++ K Sbjct: 3 KINFLSLGGQDERGKSCFVLE----VNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK---IP 119 K + IFI ++ + L +P+Y SP +++ K ++V+ K Sbjct: 59 AKRVKGIFIGTPTFNNVMGIKLLLGQVGYKIPIYTSPIGAIVIK-KIFEQKVNNKKIEPN 117 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I +G+ + S +V++S+P + V+++ G IV+ ++ + +D + Sbjct: 118 IIELDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVYVDEFIISNDKNKTFDSQ 177 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + L I LAL+ A K ++N K ++V +S+ Sbjct: 178 INLLNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYS 237 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I ++ IA+Q R ++ ++ + + + + +S + + I++ Sbjct: 238 IFTLATIAKQQNRPFIVYSNNFINTFIGVLKL-KLFNSKNLISLPVSEINNSKNAIIVVI 296 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +Q S L ++ E + V L+ D +I PG E+ + + + + A Sbjct: 297 ENQDTLFSKLNKILHNEDKYVNLSSDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKAL 356 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + DLK + +++P+ L+ I+G V I + Sbjct: 357 P---KTVLPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVTTSWIKSDQIISVS 413 Query: 420 K--MLRLFPDPIEIIDEVVH-GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + + + +++ F + +R Q+ G +++ V+ D Sbjct: 414 NGELFTIEDKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQ 473 Query: 477 -YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 +F E G+ +I + K + +V + +R LK + ++ L Sbjct: 474 FQKLFNYVEFDYCGVVNNYAQIKEIEETFKKRMGECLV-YDERKRLILKDTKANLKRLLT 532 Query: 536 SLLKKVWGKKPLVTVFIN 553 L +K + K+PLV + Sbjct: 533 KLFEKKFNKRPLVLPTVV 550 >gi|47459456|ref|YP_016318.1| hydrolase [Mycoplasma mobile 163K] gi|47458786|gb|AAT28107.1| predicted hydrolase [Mycoplasma mobile 163K] Length = 551 Score = 256 bits (653), Expect = 9e-66, Method: Composition-based stats. Identities = 95/557 (17%), Positives = 222/557 (39%), Gaps = 24/557 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + + +I+ G P G+D + PD T++ K Sbjct: 3 KVQFFALGGQDENGKNCYVLE----VDKSIYIINSGTKTPIKSTYGIDNIIPDFTYLEKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + IF T + + AL L + +V +Y+S F+ ++ + ++ + Sbjct: 59 KNRIKGIFFTDTKNNSFSALPWLLMRIDNVKIYSSAFSKAIILDRISKYKIGHNKFEVI- 117 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DAILGDVTDKD 181 +K + I + S+P ++ ++ G+ + + L + + +T+ Sbjct: 118 PIVNKTRIDNIDIIPFIIGSSLPFSLGFNFQTSDGDFIFLSNVVLGEVGKQKMFGITNLT 177 Query: 182 SLCA-IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC--VLVTTFSSSVS 238 ++ + I +G++ L+ DS + G I++ + + + AK ++V + ++ Sbjct: 178 AIKSTISKKGLIGLILDSGFSNFNGNTINKINLSPILEETFSKAKENERIIVGCYDEEMA 237 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 ++ I+D+A + R +V G + +++S+ + E G I + Sbjct: 238 TMQQILDLAIKYNRPVVPYGRAYSQLLSLLKIAYSNMQFPKIEDYEKAGNIL--NAIYLV 295 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 + +++ +KL D VI + + G E + + + + Sbjct: 296 AATTERLYQRFTRITDNNDVYLKLKNTDHVIMIAPPLNGLESYAAYTLDEIARITRNITD 355 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 D+ + + ++P+ + I G +LV + A + G + + Sbjct: 356 ISDNDFYQYR--AAKQDVYDIVKMLKPKYFLPIQGLYRYLVVASKEAEKIGYGNDKIIIL 413 Query: 417 RNGKMLRLFPDPIEIIDEVVHG--LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL- 473 +NGK+ + ++ + + DGF +G + I +R L+ G +S++ L+ Sbjct: 414 QNGKIAEFINGTLASRNKKLPNLEEVIIDGFGVGDISKEVIHEREILAREGLVSISTLIS 473 Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 D G I +G+ + + ++++ + + V + ++ D + SI Sbjct: 474 DKTKKQVGKININYVGLFSQV-EKDEVNEWIDEIVRDEINEV---EFFDQNEILNSIRKN 529 Query: 534 LRSLLKKVWGKKPLVTV 550 +R + K K+P+V V Sbjct: 530 VRKKIFKKIFKEPIVVV 546 >gi|12045283|ref|NP_073094.1| hypothetical protein MG_423 [Mycoplasma genitalium G37] gi|1351578|sp|P47662|Y423_MYCGE RecName: Full=Uncharacterized protein MG423 gi|3845013|gb|AAC71647.1| conserved hypothetical protein [Mycoplasma genitalium G37] gi|166079018|gb|ABY79636.1| conserved hypothetical protein [synthetic Mycoplasma genitalium JCVI-1.0] Length = 561 Score = 253 bits (647), Expect = 5e-65, Method: Composition-based stats. Identities = 93/567 (16%), Positives = 210/567 (37%), Gaps = 24/567 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N + + + G P + GV + PD ++I + Sbjct: 3 KIKFFALGGQDERGKNCYVLEI----DNDVFIFNVGSLTPTTAVLGVKKIIPDFSWIQEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVS---KKIPC 120 + + IFI +A ++ G+L L+ + P+Y S ++++K +++ K+ Sbjct: 59 QARVKGIFIGNAITENLGSLEFLFHTVGFFPIYTSSIGASIIKSKINENKLNIARDKLEI 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + +++ SI +V+ S+P + + + G IV D+ + +D + Sbjct: 119 HELKPLETIEISNHSITPFKVSSSLPSSFGFALNTDNGYIVFIDDFIVLNDKNIAFENQL 178 Query: 181 DSLCAIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + ++ L L+ R G + + + I+ AKG + V + S+ Sbjct: 179 NQIIPKLSDNTLLLITGVGLVGRNSGFTTPKHKSLEQLNRIITPAKGRIFVACYDSNAYS 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + ++ IA R ++ S + + + + L ++V+ + Sbjct: 239 VMTLAQIARMQNRPFIIYSQSFVHLFNTIVRQKLFNNTHLNTISIEEINNSTNSIVVLTS 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 + + L ++ E ++ + DT IF + + G E I + + V Sbjct: 299 -PPDKLYAKLFKIGMNEDERIRYRKSDTFIFMTPKVAGYEEIEAQILDDIARNEVSYY-- 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +S D+K + ++P+ ++ G + + Q G + Sbjct: 356 -NLGREILSIQASDEDMKFLVSSLKPKYIIPTGGLYRDFINFTMVLKQAGAEQNQILILF 414 Query: 420 KMLRLFPDPIE---IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-N 475 L + + +E+ D + + + +R Q+S G + + + D Sbjct: 415 NGEVLTIENKKLDSKKNELKLNPKCVDSAGLQEIGASIMFERDQMSESGVVIIIIYFDQK 474 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF-------RRKDLKLLRE 528 +G+ + K+ + + + + D+ F ++ K L+ Sbjct: 475 KSEFLNEITYSFLGVSLDVPEKDKLKTKMEELIKKQINDIKDFTTIKKRIGKEISKELKV 534 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKI 555 SI A+ +L K+ K PL+ I I Sbjct: 535 SIKRAVMNLFTKMTSKAPLILSTIISI 561 >gi|26554392|ref|NP_758326.1| hypothetical protein MYPE9430 [Mycoplasma penetrans HF-2] gi|26454402|dbj|BAC44730.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 558 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 99/563 (17%), Positives = 211/563 (37%), Gaps = 23/563 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F PLGG+ E + + +I+ G+S P + G+ + P + ++ K Sbjct: 3 KITFFPLGGMDENEKACYVLEI----DGDFYLINLGISVPVYKVLGIKKIIPYMEWVKKN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-----KKI 118 KN+ IF+ +A + GA+ ++++ ++P++ S +L+A + + K + Sbjct: 59 EKNIKGIFVGNASHRNIGAIQYCYNYIKNIPIFTSKLGAVVLKAHFNKKSMQKFSDFKPL 118 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V VG + RV SIP+T +I + NI++ ++ ++ + Sbjct: 119 QIKTLDSLKTVSVGKIKVTPFRVTSSIPDTYGFIISTGEENIIYIDEFIINSANNNAFLN 178 Query: 179 DKDSLCAI-GNEGILALMCDSTNAM-REGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSS 235 D + L + + L L+ + N G K D + + ++V + Sbjct: 179 DINKLSLLTYKQNNLVLINNVGNVDKNPGFTSPNHKTKSFYNDLLTRKNDRRIIVACYYH 238 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 V I ++ IA++ V+ + + + I + E+ I Sbjct: 239 DVHTILTLAQIAKERKLPFVIY-NPVFISMFNEIVANKYFDSSNLPMLPINKINQIEKGI 297 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V+ + + S L +S E + L + DTV+ + G E A I + + V Sbjct: 298 VVVSSTPDRLLSKLLSISNDEDDILTLKKNDTVVLGFKVESGFEKAQAEILDAYAQINVD 357 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + +S D K + I+P+ ++ G +V +K + G Sbjct: 358 ITTIP---KTILSMEASEEDHKFLVSLIKPKYIIPTLGMYYQVVKYKSVLRDIGFNPDNV 414 Query: 416 VRNGKMLRLF---PDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 + + I ++ I + +RR +S G + ++ Sbjct: 415 IAMSNGDTANFFKGNYIPNKKKIDIHEMYVGSQGILSEGENIFQERRIMSESGIIFCSLK 474 Query: 473 LDNHYNI--FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVD-LPQFRRKDLKLLRES 529 + N N+ E++ + + + + + L + V V L + D K L+ Sbjct: 475 ITNKDNVFELTNFELLPYAVLPEETETKQFFEKLNEDVSNLVSSTLKDAKTFDSKELKSI 534 Query: 530 ISSALRSLLKKVWGKKPLVTVFI 552 + + + K + K P+V V I Sbjct: 535 VKKYIAKQVDKNYEKNPVVIVSI 557 >gi|169838021|ref|ZP_02871209.1| Metal dependent hydrolase [candidate division TM7 single-cell isolate TM7a] Length = 330 Score = 250 bits (638), Expect = 6e-64, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 163/308 (52%), Gaps = 2/308 (0%) Query: 97 ASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + L AK + + F++E V V HSI + A+ I++P Sbjct: 1 GGRLTLALARAKFEKKDAKLPKEKVISGRTILKVSKYFTVEFVSVTHSIADCYAICIKTP 60 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 I+H+GD+K+D + G+ D L +G EG+ L+ DSTNA G SE+ + ++ Sbjct: 61 AATILHSGDFKVDLTPVDGEGFDFGRLAQLGEEGVDLLLSDSTNAQIPGFTPSERTVGES 120 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + D AKG +++ F+S V R++ I++IA + GRKI + G S+ ++ + ++G +K Sbjct: 121 LKDEFAKAKGRIILAAFASHVHRLQQIVNIATKHGRKIAIDGRSMVKIFEICSNLGYLKI 180 Query: 277 D-QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + YP +++++ TG+QGEP +AL++++ G +++ L E DTV+ S+ I Sbjct: 181 PRDTMIDIDKVETYPANKVLILCTGTQGEPLAALSRIANGTHKHISLREGDTVVISATPI 240 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 PGNE A N+L+++ V+ E +HVSGH + K M ++P+ + +HGE Sbjct: 241 PGNEKAATKNINQLMKRDANVVFEKGIG-IHVSGHGCQEEQKLMINLVKPKYFLPVHGEY 299 Query: 396 LHLVAHKE 403 + + Sbjct: 300 AMIKNIRN 307 >gi|240103884|ref|YP_002960193.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein [Thermococcus gammatolerans EJ3] gi|239911438|gb|ACS34329.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein [Thermococcus gammatolerans EJ3] Length = 454 Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats. Identities = 125/437 (28%), Positives = 206/437 (47%), Gaps = 40/437 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS--------------FPKDDL- 48 + + G E+G NM GY + ++ID G+ FP +L Sbjct: 10 NMIRIYTISGYEEVGKNMTAVGYSDGKKEEIVIIDVGIRLDRVLIHEDVNIQEFPTKELQ 69 Query: 49 -PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLE 106 G PD + I K ++AI +TH H DH GA+ + VPVY +P+ I L + Sbjct: 70 RLGA---IPDDSII--RNKRVVAIALTHGHLDHIGAIGKIAPHYPDVPVYGTPYTIKLAK 124 Query: 107 AKRVYERVSK-KIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++ E+ K P + G+ V V +IE VR HSIP+ +V+ +P G +VHTG Sbjct: 125 SEVKSEKYFDVKNPMYETEFGEIVQVSENLAIEFVRSTHSIPQAAMVVVHTPDGAVVHTG 184 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM--- 221 D+K D++ LG+ D L +G EG+ L+ +ST SE + + D Sbjct: 185 DFKFDNNNPLGERPDYKRLKELGKEGVKVLIPESTRVGEPTKTPSEAVAQMLLEDFFLYE 244 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ TTF+S ++R++ +I IA ++GR+ V +G SL + +A +G+IK + Sbjct: 245 GMEADGLIATTFASHIARLQELIWIANRMGRQAVFIGRSLAKYTGIAKQLGLIKMKGSRV 304 Query: 282 --------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + RE ++I TG QGEP + L +++ GE+ ++ + + Sbjct: 305 LRSPTAIKKVLAEVSQARENYLLIVTGHQGEPGAVLTRMANGELYDIGKRDTVVFSAGTI 364 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HG Sbjct: 365 PNPLNRAQRYILETKLRMKGVRMI-----KDMHVSGHASREDHRYLIRMLNPENIVPAHG 419 Query: 394 EPLHLVAHKELALQEGI 410 E L + ELA +EG Sbjct: 420 EFQMLTQYAELAEEEGY 436 >gi|309807775|ref|ZP_07701708.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|308168982|gb|EFO71067.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] Length = 392 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 92/388 (23%), Positives = 171/388 (44%), Gaps = 6/388 (1%) Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 + + +PV+ S I L + + ++D +I + Sbjct: 1 MPYILRDYDIPVFGSKLTIELAKIAVQHENKQCNDDLFHVIDEDTEIDFNNVTISFFKTT 60 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 HS+P+++ + + + G IV+TGD+K D A D L I +G+LAL+ DSTN+ Sbjct: 61 HSLPDSLGIDVSTEKGEIVYTGDFKFDPSAKKDYRMDFVRLADISRKGVLALLSDSTNSE 120 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 + I+K I ++ KN G ++V + +S++ R++ I A RK+ L G + Sbjct: 121 SVLQNDQQPDIEKYILNVFKNHDGRIIVASKASNIVRVQEIFQAAAATERKVFLTGRDIG 180 Query: 263 RVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 R+V A+ +G + + + + P + ++++ TG GEP +L +++ R +K Sbjct: 181 RIVYTAMQMGYLNVPKDILIHGKDLKNIPDKNILILETGRMGEPLKSLQKMATNRHRMIK 240 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 + D V ++ E + + + G V + H SGH DL+ + Sbjct: 241 IKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLGYDK--HTSGHATGRDLQMLID 298 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPIEIIDEVVHGL 439 ++P+ L+ + GE L HK LA++ + +NG L L D + D V Sbjct: 299 TLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKNGDCLLLDDDKFYLTDPVPAED 358 Query: 440 FLKDGFLIGKFADLGIAKRRQLSFVGHL 467 + DG +G ++ + R LS G+ Sbjct: 359 TMIDGSGVGDVGNIVLRDREILSDDGYF 386 >gi|20094212|ref|NP_614059.1| metallo-beta-lactamase superfamily hydrolase [Methanopyrus kandleri AV19] gi|19887237|gb|AAM01989.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Methanopyrus kandleri AV19] Length = 453 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 126/444 (28%), Positives = 210/444 (47%), Gaps = 42/444 (9%) Query: 1 MKNEELVFLPLGGVGEIG-MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----- 54 M+ + +GG GE G NM + ++ DCG+S K + D Sbjct: 1 MEPLTVEVFAVGGYGEAGGRNMTAVR----VDEEIVIFDCGMSLDKSLVFEKDFQKASAR 56 Query: 55 -------FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 P+ + R +A ++HAH DH GA+ L PV+ + F I L++A Sbjct: 57 ELRRVKAIPNDPILRPHRSKTVAAVLSHAHLDHIGAVPKLLFKYKCPVFGTEFTIELVKA 116 Query: 108 KRVYE-RVSKKIPCI-----SFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNI 160 E R + + I + + GD+V + +E + ++HSIP + V+ +P G I Sbjct: 117 DLRNEIRYADEAEDIMINLYTVEPGDEVQISSKLRLEFIPISHSIPCCVLPVLHTPYGAI 176 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+K DD+ I+G D L +G EG+L L+ +S E SE ++ + D+ Sbjct: 177 VYACDFKFDDNQIIGYKPDYKRLKQLGKEGVLLLITESLRVAEEIKTPSESVAREMVNDV 236 Query: 221 MKNAK---GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-- 275 ++ A ++VTTFSS + RI++I D A+++GRK++L G S+ + +A ++G++ Sbjct: 237 LRFADEESEGIIVTTFSSHIERIQAIADTADRLGRKVILAGRSMGKYGRIAEELGLLNLP 296 Query: 276 -------KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + + +E ++I TG QGEP + L ++ GE+ E V Sbjct: 297 AGARIYDRPETIRRGLERANKEKEDYLLIVTGHQGEPGAVLPRIVDGELPYRLTEEDSVV 356 Query: 329 IFSSR-AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV 387 SS P N + +L +GV++ VHVSGH D + M + ++P+ Sbjct: 357 FSSSTIPSPINRANRYVLDTKLRLKGVKMF-----KDVHVSGHAGREDHRLMLRMLQPEF 411 Query: 388 LVAIHGEPLHLVAHKELALQEGIA 411 +V HG+P L A+ ELA QEG Sbjct: 412 IVPAHGDPDMLAAYAELATQEGYE 435 >gi|254172971|ref|ZP_04879645.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] gi|214033127|gb|EEB73955.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] Length = 444 Score = 246 bits (629), Expect = 5e-63, Method: Composition-based stats. Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 40/435 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS--------------FPKDDL--P 49 + + G E+G NM GY + ++ID G+ FP +L Sbjct: 2 IRVYTISGYEEVGKNMTAVGYSDGKREEIVIIDVGIRLDRVLIHEDVNIQEFPTKELQKL 61 Query: 50 GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 G PD + I K ++AI +TH H DH GA+ + VPVY +P+ + L +++ Sbjct: 62 GA---IPDDSII--RNKRVVAIALTHGHLDHIGAIGKIAPHYPDVPVYGTPYTVKLAKSE 116 Query: 109 RVYERVSK-KIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E+ K P + G+ V V +IE VR HSIP+ +V+ +P G +VHTGD+ Sbjct: 117 VKSEKYFDVKNPMYETEFGEIVQVSENLAIEFVRSTHSIPQAAMVVVHTPDGAVVHTGDF 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D+++ LG+ D L +G EG+ L+ +ST SE + + D Sbjct: 177 KFDNNSPLGERPDYKRLKELGKEGVKVLIPESTRVGEPTKTPSEAVAQMLLEDFFLYEGM 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-- 281 ++ TTF+S ++R++ +I IA ++GR+ V +G SL + +A +G+IK + Sbjct: 237 EADGLIATTFASHIARLQELIWIANRMGRQAVFIGRSLAKYTGIAKQLGLIKMKGSRVLR 296 Query: 282 ------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + RE ++I TG QGEP + L +++ GE+ ++ + + Sbjct: 297 SPNAIKKVLAEVSQARENYLLIVTGHQGEPGAVLTRMANGELYDIGKRDTVVFSAGTIPN 356 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 357 PLNRAQRYILETKLRMKGVRMI-----KDMHVSGHASREDHRYLIRMLNPENIVPAHGEF 411 Query: 396 LHLVAHKELALQEGI 410 L + ELA +EG Sbjct: 412 QMLTQYAELAEEEGY 426 >gi|13508360|ref|NP_110310.1| metallo hydrolase [Mycoplasma pneumoniae M129] gi|2496428|sp|P75174|Y621_MYCPN RecName: Full=Uncharacterized protein MG423 homolog gi|1673887|gb|AAB95869.1| metallo hydrolase-like protein [Mycoplasma pneumoniae M129] gi|301633167|gb|ADK86721.1| conserved hypothetical protein [Mycoplasma pneumoniae FH] Length = 561 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 93/567 (16%), Positives = 209/567 (36%), Gaps = 24/567 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F GG E G N + + + + G P + GV + PD ++I + Sbjct: 3 KINFFAFGGQDERGKNCFVLEI----NNDVFIFNVGSLTPTTAVLGVKKIIPDFSWIQEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVS---KKIPC 120 + + IFI + ++ G+L L+ + P+Y S +++ K +++ ++ Sbjct: 59 QARIKGIFIGNPVTENIGSLEFLFHTVGFFPIYTSTIGAVVIKTKIHENKLNIPHDELEI 118 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + V +G +I +V+ SIP + + + G IV+ D+ + +D + Sbjct: 119 HELKPLETVKIGHHNITPFKVSSSIPSSFGFALHTDDGYIVYVDDFIVLNDKNIAFENQL 178 Query: 181 -DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + N+ +L + G + + + I+ +AKG V + S+ Sbjct: 179 NQIIPQVANKTLLLITGVGLVGRNTGFTTPKHKSLEQLNRIIASAKGRVFAACYDSNAYS 238 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + ++ IA R V+ S + + + + L ++V+ Sbjct: 239 VMTLAQIARMQNRPFVIYSHSFVHLFNAIVRQKLFNNTHLNTISIEEINNSTNAIVVLTA 298 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 + + L ++ E V+ + D+ IF I G E I + + V Sbjct: 299 -PPDKLYAKLFKIGTNEDERVRYRKTDSFIFMIPRIAGYEELEAQILDDVARNEVSYY-- 355 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +S + D+K + ++P+ ++ G + + Q G+ + Sbjct: 356 -NLGREILSINASDEDMKFLVTSLKPKYIIPTSGLYRDFINFTMVMKQAGVEQSQVLIPF 414 Query: 420 KMLRLFPDPIEIIDEVVH---GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 L + +I ++ D + + + +R Q+S G +++ + D+ Sbjct: 415 NGEVLAINHKQIDNKKRELKLNPKCVDSAGLQEIGASIMFERDQMSEAGVVTIIIYYDSK 474 Query: 477 Y-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF-------RRKDLKLLRE 528 +G+ + K+ + + + + D+ F + K L+ Sbjct: 475 KSEFLNEITYSFLGVSLDSNNQVKLKTKMEELIRKQINDIKDFTTIKRRLGKDTSKELKV 534 Query: 529 SISSALRSLLKKVWGKKPLVTVFINKI 555 SI A+ +L K+ K PL+ I I Sbjct: 535 SIKRAVMNLFTKMTAKAPLILSTIISI 561 >gi|76800001|ref|ZP_00781947.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|76584682|gb|EAO61458.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] Length = 244 Score = 246 bits (628), Expect = 8e-63, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 131/246 (53%), Gaps = 5/246 (2%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGGV E G N+ + + ++D G+ +P+++ GVD+V P++ ++++ Sbjct: 3 DIKIMALGGVRENGKNLYVVE----VNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIEN 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI-PCISF 123 +K + IF+TH H D GAL + + + PV+ SP I L + KK Sbjct: 59 KKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVI 118 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + +++ I + HSIPE+M +VI + GNIV+TGD+K D A TD L Sbjct: 119 DSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEGNIVYTGDFKFDQAARKYYQTDLARL 178 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 IG +G+LAL+ DS NA SE + I ++++A+G V+V +S++ RI+ + Sbjct: 179 AEIGRDGVLALLSDSANATSNDQVASEYEVGDEIKSVIEDAEGRVIVAAVASNLIRIQQV 238 Query: 244 IDIAEQ 249 D A + Sbjct: 239 FDAAAE 244 >gi|57641404|ref|YP_183882.1| metallo-beta-lactamase superfamily hydrolase [Thermococcus kodakarensis KOD1] gi|57159728|dbj|BAD85658.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 444 Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats. Identities = 121/435 (27%), Positives = 205/435 (47%), Gaps = 40/435 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS--------------FPKDDL--P 49 + + G E+G NM GY + ++ID G+ FP +L Sbjct: 2 IRVYTISGYEEVGKNMTAVGYSDGRKEEVVIIDMGIRLDRVLIHEDVNIQQFPTKELQRL 61 Query: 50 GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 G PD + + K ++AI TH H DH GA+ + VP+Y +P+ I L +++ Sbjct: 62 GA---IPDDSIL--RNKKVVAITFTHGHLDHIGAVGKIAPHYPDVPIYGTPYTIKLAKSE 116 Query: 109 RV-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + K P + G+ V V +IE VR+ HSIP+ +V+ +P G +VHTGD+ Sbjct: 117 VKSEQYFEVKNPMYETEFGEIVQVSENLAIEFVRITHSIPQAAMVVVHTPEGAVVHTGDF 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D++ LG+ D L +G EG+ L+ +ST SE + + D Sbjct: 177 KFDNNNPLGERPDYKRLKELGKEGVKVLIAESTRVAEPTKTPSEAVAQMLLEDFFLYEGM 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK------- 276 + ++ TTF+S ++R++ +I IA ++GR+ V +G SL + +A +G+IK Sbjct: 237 DEKGLIATTFASHIARLQELIWIANKMGRQAVFVGRSLAKYTGIAKQLGLIKMKGARAVR 296 Query: 277 -DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + RE +++ TG QGEP + L +++ GE+ ++ + + Sbjct: 297 SPNAIKKVLAEVSGARENYLLVVTGHQGEPGAVLTRMANGELYDIGKQDTVVFSAGTIPN 356 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 357 PLNRAQRYILETKLKMKGVRMI-----KDLHVSGHASREDHRYLLRMLNPENIVPAHGEF 411 Query: 396 LHLVAHKELALQEGI 410 L + ELA +EG Sbjct: 412 RMLTHYAELAEEEGY 426 >gi|147921501|ref|YP_684684.1| metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110620080|emb|CAJ35358.1| metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 445 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 127/450 (28%), Positives = 214/450 (47%), Gaps = 42/450 (9%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGV 51 MK+ + + +GG E+G NM G + +++D GV + + + Sbjct: 1 MKD--VGIIAVGGYEEVGRNMTAIRVG----KDIVVMDMGVRLDRIQIHEETEIEKMHSL 54 Query: 52 DLV----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 DL+ PD + N++ I +H H DH GA+ L P+ +PF L+ Sbjct: 55 DLIQMGAIPDDKIMNNVDGNVIGIVCSHGHLDHIGAVPKLAHRYKCPIIGTPFTAELIRQ 114 Query: 108 KRVYERVSKKIPCISFQAGDKVD--VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ER ++ ++ SIE +RV HSI + + + +P G I++ D Sbjct: 115 EIESERKFDVANKVNDLPCGQIMELSKNISIELIRVQHSIIDCAFVAVHTPSGVILYACD 174 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MK 222 +K+D ++G+ D L IG EG+LA++ +STN R G SEK + ++D + Sbjct: 175 FKIDRTPVIGEAPDFKRLKQIGKEGVLAMITESTNVNRSGKTPSEKVARDLVWDALLGTE 234 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ---- 278 + VLVTTFSS ++R++SII+ AE++ R VLLG+S++R A+ +G +KK Sbjct: 235 ETESGVLVTTFSSHIARLKSIIEAAEKMNRIPVLLGNSMERYYGTALKMGYVKKPDNLRI 294 Query: 279 ------LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + +E+ + I TG QGEP + L +++ GE + KL D +IFS+ Sbjct: 295 FGYRKSIVKEVKRMMDDGKEKYLPIITGHQGEPGAILGRIASGE-LDYKLESGDKIIFSA 353 Query: 333 RAIPG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 IP N ++ +L +G R+ VHVSGH Y D + + ++P+ ++ Sbjct: 354 NVIPNQLNMANRYSLETKLKMKGARIYDN-----VHVSGHAYKEDHWELLRMVKPEHVIP 408 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGK 420 HG A+ E+A G V + Sbjct: 409 AHGTLEMHSAYAEMAEDTGYEFGQTVHILR 438 >gi|228960240|ref|ZP_04121896.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799415|gb|EEM46376.1| Ribonuclease J 1 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 297 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 6/299 (2%) Query: 261 LKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 ++ + + ++G I+ F+ P +++++ TGSQGEP +AL++++ G R Sbjct: 1 MEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGSQGEPMAALSRIANGTHRQ 60 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ DTV+FSS IPGN +++ N L G VI +H SGH + K M Sbjct: 61 IQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHGKL-SNIHTSGHGGQEEQKLM 119 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVH 437 + I+P+ + IHGE H +A GI + NG +L L D + ++ Sbjct: 120 LRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMDNGDVLALRSDEASVAGKIPS 179 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGD 496 G DG IG ++ + RR LS G + V V +D + + P+I+ G Y + Sbjct: 180 GSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKVAAGPDIISRGF-VYMRE 238 Query: 497 GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + T + + + ++ I+ L L + ++P++ I +I Sbjct: 239 SSDLINDAQTLITTHLEKVMDRKTTQWSEIKNEITDTLAPFLYEKTKRRPMILPIIMEI 297 >gi|20089494|ref|NP_615569.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] gi|19914401|gb|AAM04049.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] Length = 447 Score = 243 bits (619), Expect = 7e-62, Method: Composition-based stats. Identities = 118/450 (26%), Positives = 210/450 (46%), Gaps = 40/450 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 E+ + +GG E+G NM G +++D G+ D + ++L+ Sbjct: 3 EIGIVAVGGYNEMGRNMTAIIIG----EDIVILDMGLRLDRVQIHEDVEIDKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 PD T + + + AI TH H DH GA+ L + P+ A+P+ +++ + Sbjct: 59 MGAIPDDTIMKEINGTVRAIVCTHGHLDHIGAIPKLAHRYNAPILATPYTAAIIKQQIES 118 Query: 112 ERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ER + + G SIE +RV HSI + + + +P G +++ D+KLD Sbjct: 119 ERKFEVCNRVIPLPAGGTYQVTEDISIEFIRVQHSIIDCILAAVHTPAGAVLYACDFKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 +G+ D D ++G EG++A++ +STNA R G SE+ K + D+ + + Sbjct: 179 RTPTMGEAPDFDRFKSLGKEGVIAMITESTNAGRSGKTPSEQIAKDMVRDVLLGTEESDV 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 +++TTF+S ++R+++II+ AE++GR VL+G S++R V A D+G ++ Sbjct: 239 GMIITTFASHIARLKAIIEAAEEMGRIPVLMGRSMERYVGAARDLGYLELPSNVEIYGMR 298 Query: 287 GLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R + + I TG QGEP S L +++ GE + D +IFS+ IP Sbjct: 299 KDIDRAFKRIMQDGKNKYLPIVTGHQGEPGSILVRVANGETPY-TIEPGDRIIFSANVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + ++ +L +G R+ VHVSGH Y D + + + P+ ++ HG+ Sbjct: 358 SPMTQANRYALETKLKMKGGRIYDN-----VHVSGHAYREDHWELLRMVNPEHVIPAHGD 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + E+A G V + + Sbjct: 413 MEMHGHYIEMAEDAGYVLGDTVHLLRNGEV 442 >gi|115372437|ref|ZP_01459746.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|115370650|gb|EAU69576.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 466 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 8/375 (2%) Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 G G+L L+ DSTN+ SE+ ++ + + A+G ++V F+S++ R+R+++ Sbjct: 96 RRGERGVLCLLSDSTNSEVTQETGSERVVEHAFERLFREAQGRIVVALFASNLHRVRTVL 155 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQG 303 +AEQ+GR++ L G S+ R V +A +G + + LF+ E+ ++++++TG+QG Sbjct: 156 KLAEQLGRRVALQGRSMTRNVEMARQLGYLDVPESLFIPLEAVPSLAPGRVVLLSTGAQG 215 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 E R+ LAQL+ G+ V+L D V+ S+R IPGNE ++G + ++L G R++ E Sbjct: 216 EARAGLAQLAAGKGP-VRLGPGDMVVLSARPIPGNERSVGALLDQLQWTGARLVYAQVEP 274 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--RNGKM 421 +HVSGH +R+ +RPQ + +HGE HL H A + G+ + R+G + Sbjct: 275 DIHVSGHASQPQQRRVLDLVRPQHFIPVHGEMRHLHRHLATARESGLTPEQLLLARDGDL 334 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIF 480 + +V G KD + G + +R +L+ G + ++D + Sbjct: 335 ISFEEGRGRFAGQVPTGRIHKDLYSGGVVTPEALQERTRLAETGMVVAVAVIDRASLALM 394 Query: 481 GVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKK 540 P++ G+ D + + + T + L R D L+RE ++ ++R K Sbjct: 395 AGPQLSGQGLSL---DEQAMLPRVAEEARTLFLQLSPQLRGDDALVREELTRSVRRAFKL 451 Query: 541 VWGKKPLVTVFINKI 555 K+PLV + K+ Sbjct: 452 FTPKRPLVVPMVVKV 466 >gi|255023423|ref|ZP_05295409.1| hypothetical protein LmonocyFSL_08295 [Listeria monocytogenes FSL J1-208] Length = 307 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 9/310 (2%) Query: 252 RKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 RKI + G S++ + + +G I+ F+ P + ++ TGSQGEP +AL+ Sbjct: 1 RKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGSQGEPMAALS 60 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 +++ G R +++ DTV+FSS IPGN ++ N L + G VI +H SGH Sbjct: 61 RIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKVN-NIHTSGH 119 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDP 428 + K M + ++P+ + IHGE H E A + G+ + NG +L L + Sbjct: 120 GGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENXFIMANGDVLALTSET 179 Query: 429 IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVD 487 + ++ DG IG ++ + RR LS G + V V +D + + P+I+ Sbjct: 180 AHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIIS 239 Query: 488 IGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLL--RESISSALRSLLKKVWGKK 545 G Y + G + + + + +K L + I+ L+ L + ++ Sbjct: 240 RGF-IYMRESGNLIGEAQGLLTRHLNKVM-ETKKQRNGLKSKNEITDTLQPFLYEKTKRR 297 Query: 546 PLVTVFINKI 555 P++ I ++ Sbjct: 298 PMILPIIMEV 307 >gi|21227868|ref|NP_633790.1| Zn-dependent hydrolase [Methanosarcina mazei Go1] gi|20906282|gb|AAM31462.1| Zn-dependent hydrolase [Methanosarcina mazei Go1] Length = 447 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 40/450 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 E+ + +GG E+G NM G +++D G+ D + ++L+ Sbjct: 3 EIGIVAVGGYNEMGRNMTAIIIG----EDIVILDMGLRLDRVQIHEDVEIDKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 PD T + + + AI TH H DH GA+ L + P+ A+P+ ++ + Sbjct: 59 MGAIPDDTIMKEINGTVRAIVCTHGHLDHIGAIPKLAHRYNAPILATPYTAAIIRQQIES 118 Query: 112 ERVSKKIPCIS--FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ER + + G SIE +RV HSI + + + +P G +++ D+KLD Sbjct: 119 ERKFEVCNRVIPLQAGGTYQVTEDISIEFIRVQHSIIDCVLAAVHTPAGAVLYACDFKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC-- 227 +G+ D D ++G EG++A++ +STNA R G SE+ K + D++ + Sbjct: 179 RTPTMGEAPDFDRFKSLGKEGVIAMITESTNAGRSGKTPSEQIAKDMVRDVLLGTEESGV 238 Query: 228 -VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 ++VTTF+S ++R+++II+ AE++GR VL+G S++R V A D+G + + Sbjct: 239 GMIVTTFASHIARLKAIIEAAEEMGRIPVLMGRSMERYVGAARDIGYLDLPSNVEIYGTR 298 Query: 287 GLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R + + I TG QGEP S L +++ GE + D +IFS+ IP Sbjct: 299 KDVDRAFKRIMQEGKNKYLPIVTGHQGEPGSILVRVANGETPY-TIDPGDRIIFSANVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + ++ +L +G R+ VHVSGH Y D + + + P+ ++ HG+ Sbjct: 358 SPMTQANRYALETKLRMKGGRIYD-----DVHVSGHAYREDHWELLRMVNPEHVIPAHGD 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + E+A G V + + Sbjct: 413 MEMHGHYIEMAEDAGYVLGDTVHLLRNGEV 442 >gi|14521123|ref|NP_126598.1| hypothetical protein PAB1751 [Pyrococcus abyssi GE5] gi|5458340|emb|CAB49829.1| Metallo-beta-lactamase superfamily protein [Pyrococcus abyssi GE5] Length = 451 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 121/448 (27%), Positives = 205/448 (45%), Gaps = 38/448 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKD----DLPGVDL- 53 + LGG E+G NM Y + + +++D G V +D + DL Sbjct: 6 NMIKIYTLGGYEEVGKNMTAVEY----NGEVVIVDMGIRLDRVLIHEDVEFQKMSSKDLR 61 Query: 54 ---VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR 109 PD I K ++AI ++H H DH GA+ L VP+Y +P+ I L +++ Sbjct: 62 KLGAIPDDRPI--RNKKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSEI 119 Query: 110 V-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 E P G+ V V +IE V++ HSIP++ +VI +P G +V+ D+K Sbjct: 120 KGEEYFEVTNPLYETNYGEIVQVSENLAIEFVQITHSIPQSSIVVIHTPEGAVVYACDYK 179 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KNA 224 D++ G+ D L +G EG+ L+ +ST E SE K + D Sbjct: 180 FDNNHPYGERPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGME 239 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--- 281 ++ TTF+S ++R++ +I+IA ++GR+ + +G SL + +A +G+IK + Sbjct: 240 ADGLIATTFASHIARLQELIEIANKMGRQAIFIGRSLAKYTGIAKQLGLIKMKGSRVLRS 299 Query: 282 -----SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 RE ++I TG QGEP + L +++ GE+ ++ + P Sbjct: 300 PNAVSKVLKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGPRDTVVFSAGVIPNP 359 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 360 LNVAQRYALETKLRMKGVRMI-----KNLHVSGHASKEDHRYLIRMLNPEYIVPAHGEFR 414 Query: 397 HLVAHKELALQEGIACVPPVRNGKMLRL 424 L + ELA +EG V + + Sbjct: 415 MLTHYAELAEEEGYMIGKEVFISRNGHV 442 >gi|212223282|ref|YP_002306518.1| hydrolase [Thermococcus onnurineus NA1] gi|212008239|gb|ACJ15621.1| hydrolase [Thermococcus onnurineus NA1] Length = 440 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 44/435 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS--------------FPKDDL--P 49 + L G E+G NM Y + + ++ID G+ FP +L Sbjct: 2 IKIYTLSGYEEVGKNMTAVEY----NGEVVIIDMGIRLDRVLIHEDVNIQQFPAKELQKL 57 Query: 50 GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 G PD + I K ++AI TH H DH GA+ L VP+Y +P+ I L +++ Sbjct: 58 GA---IPDDSPI--RNKKVVAIAFTHGHLDHIGAVGKLAPHYPDVPIYGTPYTIKLAKSE 112 Query: 109 RV-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + K P + G+ V V +IE V++ HS+P+ +V+ +P G +VHTGD+ Sbjct: 113 VKSEQYFEVKNPMYETEYGEIVQVSENLAIEFVQITHSVPQAAIVVVHTPEGAVVHTGDF 172 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D++ LG+ D D L +G EG+ L+ +ST SE + + D Sbjct: 173 KFDNNNPLGERPDYDRLKELGKEGVKVLIPESTRVAEPTKTPSEAVAQMLLEDFFLYEGM 232 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK------- 276 ++ TTF+S ++R++ +I IA ++GR+ VL+G SL + +A +G+IK Sbjct: 233 ESDGLIATTFASHIARLQELIWIANRMGRQAVLVGRSLAKYTGIAKQLGLIKMKGAKAVR 292 Query: 277 -DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 RE ++I TG QGEP + L +++ GE+ ++ + + Sbjct: 293 SPNAVRKVLKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGKRDTVVFSAGTIPN 352 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HG+ Sbjct: 353 PLNRAQRYVLETKLRMRGVRMI-----KDLHVSGHASREDHRYLLRILNPENIVPGHGDF 407 Query: 396 LHLVAHKELALQEGI 410 L + ELA +EG Sbjct: 408 RMLTHYAELAEEEGY 422 >gi|73668942|ref|YP_304957.1| metallo-beta-lactamase [Methanosarcina barkeri str. Fusaro] gi|72396104|gb|AAZ70377.1| metallo-beta-lactamase [Methanosarcina barkeri str. Fusaro] Length = 447 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 121/450 (26%), Positives = 211/450 (46%), Gaps = 40/450 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 E+ + +GG E+G NM G I++D G+ D + ++L+ Sbjct: 3 EIGIVAVGGYNEMGRNMTAVIVG----EDIIILDMGLRLDRVQIHEDVEIDKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 PD T + + + AI TH H DH GA+ L + P+ ++P+ L++ + Sbjct: 59 MGAIPDDTIMKEINGTVRAIVCTHGHLDHIGAIPKLAHRYNAPIISTPYTTALIKQQIEA 118 Query: 112 ERVSKKIPCIS--FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ER + + G SIE + V HSI + + + +P+G +++ D+KLD Sbjct: 119 ERKFEVCNRVIPLNAGGTYQVTEDISIEFINVQHSIIDCVLAAVHTPIGAVLYACDFKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 +G+ D + L ++G EG++A++ +STNA R G SEK K + D+ + ++ Sbjct: 179 RTPTMGEAPDFERLKSLGKEGVIAMIVESTNAGRSGKTPSEKIAKDMVRDVLLGTEESEV 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 +++TTF+S + R+++II+ AE++GR VLLG S++R V A D+G ++ Sbjct: 239 GMIITTFASHIPRLKAIIEAAEEMGRIPVLLGRSMERYVGAAKDLGYLELPSNVEMHGQR 298 Query: 287 GLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R + + I TG QGEP S L +++ GE + D VIFS+ IP Sbjct: 299 KDVDRALKRIIQEGKNKYLPIVTGHQGEPGSILVRIANGETPY-TIEPGDRVIFSANVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + ++ +L +G R+ VHVSGH Y D + + + P+ ++ HG+ Sbjct: 358 SPMTQANRYALETKLKMRGARIYDN-----VHVSGHAYREDHWELLRMVNPEHVIPAHGD 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + E+A G V + + Sbjct: 413 MEMHGHYIEMAEDAGYVLGDTVHLLRNGEV 442 >gi|313633922|gb|EFS00636.1| ribonuclease J 1 [Listeria seeligeri FSL N1-067] Length = 292 Score = 239 bits (611), Expect = 7e-61, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 6/294 (2%) Query: 266 SVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 + +G I+ F+ P + ++ TGSQGEP +AL++++ G R +++ Sbjct: 1 EIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGSQGEPMAALSRIANGTHRQIQIQP 60 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 DTV+FSS IPGN ++ N L + G VI +H SGH + K M + ++ Sbjct: 61 GDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKVN-NIHTSGHGGQQEQKLMLRLMK 119 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ + IHGE H A + G+ + NG +L L + I ++ Sbjct: 120 PKFFMPIHGEFRMQKIHAGSAEECGVPEENSFIMANGDVLALTSETAHIAGKIHAASVYI 179 Query: 443 DGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIH 501 DG IG ++ + RR LS G + V V +D + + P+I+ G Y + G + Sbjct: 180 DGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGF-IYMRESGNLI 238 Query: 502 KLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + + + + ++ I+ L+ L + ++P++ I ++ Sbjct: 239 GEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV 292 >gi|14590907|ref|NP_142980.1| hypothetical protein PH1071 [Pyrococcus horikoshii OT3] gi|3257487|dbj|BAA30170.1| 450aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 450 Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats. Identities = 123/449 (27%), Positives = 203/449 (45%), Gaps = 38/449 (8%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKD----DLPGVDL 53 + LGG E+G NM Y + ++ID G V +D + DL Sbjct: 9 ENMIKIYTLGGYEEVGKNMTAVEY----EGEVVIIDMGIRLDRVLIHEDVEFQKMSSKDL 64 Query: 54 ----VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 PD I K ++AI ++H H DH GA+ L VP+Y +P+ I L +++ Sbjct: 65 RKLGAIPDDRPIRD--KKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSE 122 Query: 109 RV-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E P G+ V V +IE V+V HSIP + +VI +P G +V+ D+ Sbjct: 123 IKGEEYFEVTNPLYETNYGEIVQVSENLAIEFVQVTHSIPHSSIVVIHTPEGAVVYACDY 182 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D++ G+ D L +G EG+ L+ +ST E SE K + D Sbjct: 183 KFDNNHPYGEKPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGM 242 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-- 281 ++ TTF+S ++R++ +I+IA ++GR+ + +G SL + +A +G+IK + Sbjct: 243 EADGLIATTFASHIARLQELIEIANKMGRQAIFIGRSLAKYTGIAKQLGLIKMKGSRVLR 302 Query: 282 ------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 RE ++I TG QGEP + L +++ GE+ ++ + Sbjct: 303 SPNAVSKVLKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGPRDTVVFSAGVIPN 362 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 363 PLNIAQRYALETKLKMRGVRMI-----KDLHVSGHASKEDHRYLIRMLNPEYIVPAHGEF 417 Query: 396 LHLVAHKELALQEGIACVPPVRNGKMLRL 424 L + ELA +EG V + + Sbjct: 418 RMLTHYAELAEEEGYRIGKDVFISRNGHI 446 >gi|88604120|ref|YP_504298.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189582|gb|ABD42579.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 445 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV------SFPKDDL---PGVDLV 54 ++ L +GG E G NM G ++ ++ D G+ +P ++ +DL+ Sbjct: 1 MDIEILAVGGYNEFGRNMTAVRCG----KEIVIFDMGIRLDSLMMYPDIEMENTHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + + A+ ++H H DH GA+ L + P+ +P+ I L++ + Sbjct: 57 QMGVIPDDTVMNQLEGTVKAVILSHGHLDHIGAVPKLVHRYNAPIIGTPYTIELVKQQIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ I+ + G + ++ +E VR HSI +T + + +P G IV+ D+KL Sbjct: 117 GEKKFGVNNKLIALKCGQRYNISNTLGMEFVRTQHSIIDTATVALYTPKGAIVYALDFKL 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D + +LG+ D L IG EG+L L+ +STN ++G C SE+ K + D+ ++ K Sbjct: 177 DRNPVLGEPPDFAKLKKIGKEGVLCLITESTNVNKKGRCPSEQIAKNMVRDVITSYEDDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++V+TF+S ++R+++I + A +IGRK +LLG S++R A + +++ + Sbjct: 237 NAIIVSTFASHIARVKTIAECAHEIGRKPLLLGRSMERYCVTAEQMKMVRFPDTTSVFGN 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + R EQ + I TG QGEP S L ++++ + K+ D V+ S++ I Sbjct: 297 RRVVERTLRRLIKSGKEQYVPIVTGHQGEPGSILTRIAQNDTPY-KIERGDKVMISAQLI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N + L QG R+ E +HVSGH Y D M + PQ +++ HG Sbjct: 356 PNDMNRAQRYRMFTMLKSQGARIFDE-----LHVSGHAYCEDHYEMVHLLNPQFIISAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + LA + G Sbjct: 411 GIDLTSEYLGLATELGYT 428 >gi|219852945|ref|YP_002467377.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219547204|gb|ACL17654.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 445 Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats. Identities = 119/432 (27%), Positives = 209/432 (48%), Gaps = 40/432 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGVDLV 54 E+ + +GG E+G NM G ++ ++ D G+ + +++ +DL+ Sbjct: 1 MEIEVIGVGGYDEVGRNMTAVRCG----KEIVVFDMGLRLDQVMIHEDAEVENMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + AI TH H DH GA+ L + P+ ++P+ L+ + Sbjct: 57 QMKAIPDDTMMNTVEGTVKAIVCTHGHLDHIGAIPKLAHRYNAPIISTPYTTELIRQQIA 116 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + +AG K + ++E VR HSI +T+ V+ +P G +V+ D+KL Sbjct: 117 GEQKFGVNNKLFALKAGQKYTISQHLTLEFVRTQHSIIDTVTAVLHTPHGAVVYACDFKL 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D ++G+ D L IG EG+LAL+ ++ N +G C SE+ + + D ++ K Sbjct: 177 DRTPVIGEPPDFARLRQIGKEGVLALIVEAVNIHSKGRCPSEQIARDLVRDTISSFEDEK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G ++V+TFSS ++RI++I + A +IGR VLLG S+++ S A + ++ + Sbjct: 237 GGIIVSTFSSHIARIKTITECAHEIGRTPVLLGRSMEKYSSAAEQMKLVSFPPNTSMFGN 296 Query: 286 FGLYP----------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 E+ I I TG+QGEP + L+++ GE ++ + D ++FS++ I Sbjct: 297 RRTVDRTLRRIMKTGPEKFIPIVTGAQGEPGATLSRIGAGETPY-QIQKGDKILFSAKVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL G R+ E +HVSGH Y D + PQ ++ HG Sbjct: 356 PNPLNYGQRYLLETRLRMAGARIHDE-----LHVSGHAYIEDHYEFVNLLNPQHIIPAHG 410 Query: 394 EPLHLVAHKELA 405 A+ + A Sbjct: 411 GLGMTGAYADFA 422 >gi|282164306|ref|YP_003356691.1| hypothetical protein MCP_1636 [Methanocella paludicola SANAE] gi|282156620|dbj|BAI61708.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 445 Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats. Identities = 123/438 (28%), Positives = 210/438 (47%), Gaps = 40/438 (9%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV- 54 ++ + +GG E+G NM G ++ +++D GV + + +DL+ Sbjct: 3 DVGIVAVGGYEEVGRNMTAIRVG----KEIVIMDMGVRLDRIQIHEETEIEKMHSLDLIK 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 PD + N++ I TH H DH GA+ L P+ ++PF L+ + Sbjct: 59 MGAIPDDKVLNNVDGNVVGIVCTHGHLDHIGAVPKLAHRYKCPIVSTPFTSELIRQEIES 118 Query: 112 ERVSKKIPCISFQAGDKVD--VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ER + + ++ SIE +RV HSI + + +P G I++ D+K+D Sbjct: 119 ERKFEVANKLQPLQCGEIRELTKNISIELIRVQHSIVDCAFAALHTPKGIILYACDFKID 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 LG++ + L IG EG+LA++ +STNA G SE+ + ++D + + Sbjct: 179 RTPTLGELPNFKRLKQIGKEGVLAMITESTNADHSGKTPSEQIARDMVWDALLGTEETES 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD--- 283 VLVTTFSS ++R++SII+ AE++ R VLLGSS++R A+ +G ++K Sbjct: 239 GVLVTTFSSHIARLKSIIEAAEKMDRIPVLLGSSMERYFGTALKMGYVEKPDNMKIFGYR 298 Query: 284 -------ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + +++ + I TG QGEP + L +++ GE + KL D VIFS+ IP Sbjct: 299 RSVEKAVKQIMKEGKDKYLPIVTGHQGEPDAVLGRIASGE-LDFKLEAGDKVIFSANVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N+ + +L +G R+ VHVSGH Y D + + ++P+ ++ HG Sbjct: 358 NMLNQANRYACETKLKMRGARIYDN-----VHVSGHAYKEDHWELLRMVKPEHVIPAHGN 412 Query: 395 PLHLVAHKELALQEGIAC 412 A+ ++A G Sbjct: 413 MHMHTAYVDMAEDTGYEF 430 >gi|332159145|ref|YP_004424424.1| hypothetical protein PNA2_1505 [Pyrococcus sp. NA2] gi|331034608|gb|AEC52420.1| hypothetical protein PNA2_1505 [Pyrococcus sp. NA2] Length = 440 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 120/448 (26%), Positives = 200/448 (44%), Gaps = 44/448 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------------SFPKDDL--P 49 + LGG E+G NM Y + I+ID G+ +L Sbjct: 2 IKIYTLGGYEEVGKNMTAVEY----DGEVIIIDMGIRLDRVLIHEDVEFQKMSSKELRKL 57 Query: 50 GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 G PD I K ++AI ++H H DH GA+ L VP+Y +P+ I L +++ Sbjct: 58 GA---IPDDRPIRD--KKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSE 112 Query: 109 RV-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + P G+ V V +IE V++ HSIP + +VI +P G +V+ D+ Sbjct: 113 IKSEQYFEVTNPLYETNYGEIVQVSENLAIEFVQITHSIPHSSIVVIHTPEGAVVYACDY 172 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D++ G+ D L +G EG+ L+ +ST E SE K + D Sbjct: 173 KFDNNHPYGERPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGM 232 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-- 281 ++ TTF+S ++R++ +I+IA ++GR+ + +G SL + +A +G+IK + Sbjct: 233 DADGLIATTFASHIARLQELIEIANKMGRQAIFIGRSLAKYTGIAKQLGLIKMKGSRVLR 292 Query: 282 ------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 RE ++I TG QGEP + L +++ GE+ ++ + Sbjct: 293 SPNAISKVLKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGSRDTVVFSAGVIPN 352 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 353 PLNVAQRYALETKLRMRGVRMI-----KNLHVSGHASKEDHRYLIRMLNPEYIVPAHGEF 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKMLR 423 L + ELA +EG V + Sbjct: 408 RMLTHYAELAEEEGYMIGKDVFISRNGH 435 >gi|18977473|ref|NP_578830.1| hypothetical protein PF1101 [Pyrococcus furiosus DSM 3638] gi|18893172|gb|AAL81225.1| hypothetical protein PF1101 [Pyrococcus furiosus DSM 3638] Length = 439 Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats. Identities = 120/448 (26%), Positives = 201/448 (44%), Gaps = 44/448 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------------SFPKDDL--P 49 + LGG E+G NM Y + ++ID G+ +L Sbjct: 2 IKIYTLGGYEEVGKNMTAVEY----EGEIVIIDMGIRLDRVLIHEDVEFQKMSSKELRKL 57 Query: 50 GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK 108 G PD I K ++AI ++H H DH GA+ L VP+Y +P+ I L +++ Sbjct: 58 GA---IPDDRPIRD--KKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSE 112 Query: 109 RV-YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E P G+ V V +IE V++ HSIP + +VI +P G +V+ D+ Sbjct: 113 IKGEEYFEVTNPLYETNYGEIVQVSENLAIEFVQITHSIPHSSIVVIHTPEGAVVYACDY 172 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 K D++ G+ D L +G EG+ L+ +ST E SE K + D Sbjct: 173 KFDNNHPYGEKPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGM 232 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-- 281 ++ TTF+S ++R++++I+IA ++GR+ V +G SL + +A +G+IK + Sbjct: 233 EADGLIATTFASHITRLQALIEIANKMGRQAVFIGRSLAKYTGIAKQLGLIKMKGSRVLR 292 Query: 282 ------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 RE +++ TG QGEP + L +++ GE+ ++ + Sbjct: 293 SPNAISKVLKEVSQARENYLLVVTGHQGEPGAILTRMANGELYDIGPRDTVVFSAGVIPN 352 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 P N ++ +L +GVR+I +HVSGH D + + + + P+ +V HGE Sbjct: 353 PLNIAQRYALETKLRMKGVRMI-----KNLHVSGHASKEDHRYLIRMLNPENIVPAHGEF 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKMLR 423 L + ELA +EG V + Sbjct: 408 RMLTHYAELAEEEGYMIGKDVFISRNGH 435 >gi|147920894|ref|YP_685299.1| metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110620695|emb|CAJ35973.1| metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 445 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 118/450 (26%), Positives = 211/450 (46%), Gaps = 42/450 (9%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGV 51 MK+ + + +GG E+G NM G ++ +++D GV + +++ + Sbjct: 1 MKD--VGIIAVGGYEEVGRNMTAIRVG----KEIVIMDMGVRLDRIQIHEDTEMENMHSL 54 Query: 52 DLV----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 DL+ PD + N++ I TH H DH GA+ L P+ +PF L+ Sbjct: 55 DLIQMGAIPDDKILKNVDGNVVGIVCTHGHLDHIGAVPKLAHRYKCPIIGTPFTTELIRQ 114 Query: 108 KRVYERVSKKIPCISFQAGDKVDV--GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ER K + ++ S+E +RV HSI ++ + +P G I++ D Sbjct: 115 EIKSERKFKVTNKLVPMMCGEIYDLSRNISVELIRVQHSIIDSAFAALHTPYGIILYACD 174 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MK 222 +K+D LG++ D L IG +G+ A++ + ++ G SE+ K ++D + Sbjct: 175 FKIDRTPTLGELPDFKRLKQIGRDGVFAMITEGLDSDHSGKTPSEQIAKDLVWDALLGTE 234 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL--- 279 + VLVTTF+S ++R+ ++I+ A ++ R VL+GSS++R A+ +G +KK Sbjct: 235 ETESGVLVTTFASHIARLTAVIEAAAKMDRVPVLMGSSMERYYGTALRMGYVKKPDNLKI 294 Query: 280 -------FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + + + + I TG QGEP + L +++ GE + ++ D VIFS+ Sbjct: 295 CGNRRAVDSTAKQIIREGKNKYLPIVTGHQGEPGAVLGRIASGE-LDFQMEAGDKVIFSA 353 Query: 333 RAIPG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 IP N + +L ++G R+ VHVSGH Y D + + +RP+ ++ Sbjct: 354 NVIPNQLNIANRYMCETKLKQRGARIYD-----RVHVSGHAYKEDHWELLRMVRPEHVIP 408 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGK 420 HG A+ E+A G V + Sbjct: 409 THGTLNMHTAYVEMAEDTGYEFGQTVHILR 438 >gi|256811062|ref|YP_003128431.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] gi|256794262|gb|ACV24931.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] Length = 448 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 123/438 (28%), Positives = 212/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 +L + +GG E+G NM + I++D GV L ++L+ Sbjct: 1 MKLEIIAIGGYEEVGRNMTAV----NVDGEIIILDMGVRLDRVLIHEDTDISKLHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 P+ T + + AI ++H H DH GA+ L + P+ +P+ I L++ Sbjct: 57 EKGIIPNDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHRYNAPIIGTPYTIELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I AG+ +D+ ++E +R+ HSIP+ + V+ +P G IV+ D+KL Sbjct: 117 SEKKFDVRNPLIVLNAGESIDLTPNITLEFIRITHSIPDAVLPVLHTPYGAIVYGNDFKL 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAK 225 D+ ++G+ D ++ +G G+L + ++T EG E + + N K Sbjct: 177 DNFPVVGERPDYKAIKRVGKNGVLCFISETTRINHEGKTPPEIIASGLLKNDLLAADNDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V+VTTFSS ++RI+SI DIAE++GR VLLG S+ R +A D+G++K + Sbjct: 237 NGVVVTTFSSHIARIKSITDIAEKMGRTPVLLGRSMMRYCGIAQDIGLVKFPEDLRIYGD 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 E+ ++IATG QGE + L++++ + K + D V+FS+ I Sbjct: 297 PSSIEMALKNIVKEGKEKYLIIATGHQGEEGAVLSRMATNKTPY-KFDKYDCVVFSADPI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N +++RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYMLESRLKLLGVRIF-----KGAHVSGHAAKEDHRDMLRWLNPEHIIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTAEYTKLAEEEGYR 428 >gi|315229910|ref|YP_004070346.1| Zn-dependent hydrolase [Thermococcus barophilus MP] gi|315182938|gb|ADT83123.1| putative Zn-dependent hydrolase [Thermococcus barophilus MP] Length = 441 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 122/433 (28%), Positives = 204/433 (47%), Gaps = 40/433 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------------SFPKDDLPGV 51 + LGG E+G NM Y + + ++ID G+ P +L + Sbjct: 2 INIYTLGGYEEVGKNMTAVEY----NGEVVIIDMGIRLDRVLIHEDVEFQKMPSKELRKI 57 Query: 52 DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRV 110 PD T I K ++AI +H H DH GA+ L VP+Y + + I L +++ Sbjct: 58 -GAIPDDTPI--RNKKVVAIAFSHGHLDHIGAIAKLAPHYPDVPIYGTSYTIKLAKSEVK 114 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + K P Q G+ V V +IE V++ HSIP + +V+ +P G +V+ D+K Sbjct: 115 SEQYFEVKNPMYETQYGEIVQVSENLAIEFVQITHSIPHSSIVVVHTPEGAVVYACDYKF 174 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK---NAK 225 D+++ LG+ D L IG EG+ L+ +ST + SE K + D + Sbjct: 175 DNNSPLGEKPDYKRLKEIGKEGVKVLIAESTRVAEQTKTPSEAVAKMLLEDFFYYDGMDE 234 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL---- 281 ++ TTF+S ++R++ +I+IA IGR+ +L+G SL + +A +G+IK + Sbjct: 235 KGLIATTFASHIARLQELIEIANNIGRQAILVGRSLAKYTGIAKQLGLIKMKGSRVLRSP 294 Query: 282 ----SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG 337 RE ++I TG QGEP + L +++ GE+ N+ + P Sbjct: 295 NAVQKVLREVSQARENYLLIVTGHQGEPGAVLTRMANGELYNIGKDDTVVFSAGVIPNPL 354 Query: 338 NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 N ++ +L +GVR++ +HVSGH D + + + + P+ +V HGE Sbjct: 355 NIAQRYALETKLKMKGVRMV-----KNLHVSGHASREDHRYLIKMLNPENIVPAHGEFRM 409 Query: 398 LVAHKELALQEGI 410 L + ELA +EG Sbjct: 410 LTHYAELAEEEGY 422 >gi|288560180|ref|YP_003423666.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] gi|288542890|gb|ADC46774.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] Length = 449 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 41/457 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 + + +GG E+G NM G I+ D G+ D + +DL+ Sbjct: 1 MTVEVIAIGGYEEVGKNMTAVKVG----EDVIIFDMGIHLDRISIHEDTDIDRMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + I +H H DH GA+ L P+ +P+ L+E + Sbjct: 57 ERGVIPDDTLMKDVDGKVKGIVFSHGHLDHIGAVAKLAHRYDAPIIGTPYTTALIEKQIK 116 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P G K+ + ++E V+ HSIP+ + V+ + G IV+ D+K Sbjct: 117 GERKFKVNNPIRPLNPGSKIKLSKDITLEFVQSTHSIPQAVFPVLHTSEGIIVYALDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDIMKNA-- 224 D+ + D + L +G +G+LAL+ ++TNA+ E SEK + + D+MK A Sbjct: 177 DNHQKVSPPPDYNRLRELGRKGVLALIVETTNAINYTETRTYSEKVARIILEDLMKRAFK 236 Query: 225 --KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 K ++VTTFSS + RI++I DIA+ R+I+ LG S++R +A ++GI+K Q Sbjct: 237 GQKEGMIVTTFSSHIERIQTIADIAKDSNREILFLGRSMERFCGIAQNLGILKLPQNAYV 296 Query: 283 DESFG---------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 S R+Q +++ TG QGEP + L +++ + + D VIFS+ Sbjct: 297 YGSPKAVNKALMKAEDDRDQYLLVTTGHQGEPDALLPRIASARTP-FNVKKGDNVIFSAP 355 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 IP A ++E ++ HVSGH D + + +RP+ ++ HG Sbjct: 356 IIPNPTNAANR---HILESKLKANGARIYANAHVSGHAGREDHRDFLRMLRPKHIIPAHG 412 Query: 394 EPLHLVAHKELALQEGI---ACVPPVRNGKMLRLFPD 427 E LVA+ ELA +EG V +RN + D Sbjct: 413 ELEMLVAYGELAEEEGYRIGNNVHILRNAQAQVFNGD 449 >gi|167525833|ref|XP_001747251.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774546|gb|EDQ88175.1| predicted protein [Monosiga brevicollis MX1] Length = 806 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 152/293 (51%), Gaps = 12/293 (4%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERK 66 F+PLGG G++GMN +L+GY KW+MID G+ F + G + D TFI + +K Sbjct: 114 FVPLGGCGQVGMNCSLFGY----QNKWLMIDYGMMFDFESGALGANGYVADTTFIEERKK 169 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK---KIPCISF 123 +L+A+ +TH HEDH G + W+ +P+Y + +L + V + Sbjct: 170 DLVALVVTHGHEDHIGGIVSKWADWQIPIYCTALTGHMLRQRFEMTDVDPNLVEANLHVI 229 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDDAILGDVTDKD 181 + D+VDVG FS + HSIPE+ A+++ + TGDW++D + ++G D D Sbjct: 230 KPKDQVDVGPFSFHFQPITHSIPESQAVILDHQPTGKKLFFTGDWRIDRNPVIGPPFDDD 289 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGCVLVTTFSSSVSR 239 + A+G++G+LA+ DSTNA EG E + +++ G + T FSSS++R Sbjct: 290 AFRALGDQGVLAMFGDSTNASIEGHSKDELSTLDGLRATLRDCNPNGLTVATCFSSSIAR 349 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 I+ ++ A + GR VL+G+SL R+ A G L S + Y Sbjct: 350 IQLMMQAAVESGRTPVLIGASLIRMDEAASLAGSSFDALLPPSFDKPNHYHMS 402 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 11/270 (4%) Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 L +IATG QGEP + L +++ L +D VIFS+R IPGNEV + N Sbjct: 545 HLRPSDLFIIATGCQGEPTATLPRMAAAN----ILGPQDNVIFSARTIPGNEVTCRRLLN 600 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 L V+V A+ P+HVSGHPY DL+ M ++P +V +HGE +H H +LA Sbjct: 601 SLRRADVQVFQPGAKYPIHVSGHPYRGDLEHMLGLVKPLAVVPVHGEFIHQDDHAQLAAV 660 Query: 408 EGIACVPPVRNGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG 465 G+A NG ++R+ ++ + + G + + R +++ G Sbjct: 661 RGVAHTILPANGDVIRISSSGELQKLANFECEPRVVVGGTSVFAPDAHMLRDRVRMNAEG 720 Query: 466 HLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKL 525 ++V + + + + K +T+ +V + + KD+ Sbjct: 721 TFVLSVA---RASGSARVAVTSH--VVGVMENTHLPKPAQRTLNRSVRTIMRSTEKDVVT 775 Query: 526 LRESISSALRSLLKKVWGKKPLVTVFINKI 555 LR + + S + + + K+P+V V I + Sbjct: 776 LRRELKQCVTSFMYRTYRKRPVVMVHILNV 805 >gi|91774307|ref|YP_566999.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242] gi|91713322|gb|ABE53249.1| UPF0036 protein, beta-lactamase-like [Methanococcoides burtonii DSM 6242] Length = 447 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 121/449 (26%), Positives = 210/449 (46%), Gaps = 40/449 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 ++ + +GG E+G NM I++D G+ D + ++L+ Sbjct: 3 DIGIIAVGGYNEMGRNMTAIR----VDEDIIIVDMGLRLDRVQIHEDVEIDKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV- 110 PD T + + N+ AI TH H DH GA+ L P+ +P+ L++ + Sbjct: 59 MGAIPDDTIMKQVNGNVAAIVCTHGHLDHIGAIPKLAHRYTAPIIGTPYTAALIKQQIES 118 Query: 111 YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + K I +AG + SIE +RV HSI + + + + +PVG +++ D+KLD Sbjct: 119 ERKFGVKNKIIPIEAGGTYQINDDVSIELIRVQHSIIDAVFVAVHTPVGAVLYACDFKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 LG+ D + L +G EG++ ++ +STNA R+G SE+ + D+ + + Sbjct: 179 RTPTLGEAPDFERLRELGKEGVICMIVESTNANRKGKTPSEQIAHDMVRDVLLGTEESDV 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 ++VTTF+S ++RI SII +A ++GR VL+G S+ + V A ++G I + Sbjct: 239 GMIVTTFASHIARINSIIQVAGEMGRIPVLMGRSMDKYVVTAKNMGYIDFPKNVEIYGKR 298 Query: 287 GLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R E+ + I TG QGEP + L++++ G+ ++ D +IFS+ IP Sbjct: 299 KDIDRAFKKIMSEGKEKYLPIVTGHQGEPGAILSRVASGDTP-FEVESGDRIIFSANIIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + ++ +L +G R+ VHVSGH Y D + + I P+ ++ HG Sbjct: 358 SPMTQANRYALETKLKMKGARIYD-----DVHVSGHAYREDHWELLRMINPEHVIPAHGN 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLR 423 A+ E+A G V + Sbjct: 413 IGMHSAYIEMAEDAGYILGDTVHMLRNGE 441 >gi|289192773|ref|YP_003458714.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] gi|288939223|gb|ADC69978.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] Length = 448 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 +L + +GG E+G NM + I++D G+ L ++L+ Sbjct: 1 MKLEIIAIGGYEEVGRNMTAV----NVDGEIIILDMGIRLDRVLIHEDTDISKLHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 P+ T + + AI ++H H DH GA+ L + P+ +P+ I L++ Sbjct: 57 EKGIIPNDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHRYNAPIIGTPYTIELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I AG+ +D+ ++E +R+ HSIP+++ V+ +P G+IV+ D+K Sbjct: 117 SEKKFDVRNPLIVLNAGESIDLTPNITLEFIRITHSIPDSVLPVLHTPYGSIVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAK 225 D+ ++G+ D ++ +G G+L + ++T EG E + + N K Sbjct: 177 DNFPVVGERPDYRAIKKVGKNGVLCFISETTRINHEGKTPPEIIASGLLKNDLLAADNDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTFSS ++RI+SI DIAE++GR VLLG S+ R +A D+G+++ + Sbjct: 237 NGIIVTTFSSHIARIKSITDIAEKMGRTPVLLGRSMMRFCGIAQDIGLVQFPEDLRIYGD 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 E+ ++IATG QGE + L++++ + K + D V+FS+ I Sbjct: 297 PSSIEMALKNIVKEGKEKYLIIATGHQGEEGAVLSRMATNKTPY-KFEKYDCVVFSADPI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N +++RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYMLESRLKLLGVRIF-----KGAHVSGHAAKEDHRDMLRWLNPEHIIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTAEYTKLAEEEGYR 428 >gi|150399804|ref|YP_001323571.1| beta-lactamase domain-containing protein [Methanococcus vannielii SB] gi|150012507|gb|ABR54959.1| beta-lactamase domain protein [Methanococcus vannielii SB] Length = 448 Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats. Identities = 120/450 (26%), Positives = 217/450 (48%), Gaps = 40/450 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D G+ +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGIRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ + G+K+D+ ++E V++ HSIP+ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPYGAVVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D +L IG +G++A++ +ST A EG SE + + N Sbjct: 177 DNFPVVGEKPDYKALKRIGKQGVIAMVSESTRADYEGKTPSEGVAANLLKNDLLGTDNQD 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V+VTTFSS ++R++SI D+A ++GR VL+G S+ + +A D+G Sbjct: 237 NGVIVTTFSSHIARVKSITDVATKMGRIPVLVGRSMAKYCGIAQDIGLVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +E ++I TG QGE + L++++ + K + D V+FS+ I Sbjct: 297 PSSIDKTYHQIMKEGKENYLLIVTGHQGEEGAVLSRMATNKTP-FKFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W++P+ L+ HG Sbjct: 356 PNPMNSAQRYLLEARLKLMGVRIF-----KGAHVSGHAAKEDHRDLLRWMQPEHLIPSHG 410 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGKMLR 423 + A+ +LA +EG V + + Sbjct: 411 DFNLTAAYTKLAEEEGFRLGEDVHLLRNWQ 440 >gi|261402403|ref|YP_003246627.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] gi|261369396|gb|ACX72145.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] Length = 448 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 214/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 +L + +GG E+G NM + I++D G+ L ++L+ Sbjct: 1 MKLEIIAIGGYEEVGRNMTAV----NVDGEIIILDMGIRLDRVLIHEDTDISKLHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 P+ T + + AI ++H H DH GA+ L + P+ +P+ I L++ Sbjct: 57 EKGIIPNDTVMKNIEGEVKAIVLSHGHLDHIGAIPKLAHRYNAPIIGTPYTIELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I AGD +D+ ++E +R+ HSIP+++ V+ +P G+IV+ D+K Sbjct: 117 SEKKFDVRNPLIVLNAGDSIDLTPNITLEFIRITHSIPDSVLPVLHTPYGSIVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 D+ ++G+ D ++ +G G+L + ++T EG E + + + A K Sbjct: 177 DNFPVVGERPDYRAIKKVGKNGVLCFISETTRINHEGKTPPEIIAAGLLKNDLLGADNDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTFSS ++RI+SI DIAE++GR +LLG S+ R +A D+G++K + Sbjct: 237 NGIIVTTFSSHIARIKSITDIAEKMGRTPILLGRSMMRFCGIAQDIGLVKFPEDLRIYGD 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 ++ ++IATG QGE + L++++ + K + D V+FS+ I Sbjct: 297 PSSIEMALKNIVKEGKDKYLIIATGHQGEEGAVLSRMATNKTPY-KFEKYDCVVFSADPI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N +++RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYMLESRLKLLGVRIF-----KGAHVSGHASKEDHRDMLRWLNPEHIIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTAEYTKLAEEEGYR 428 >gi|52550291|gb|AAU84140.1| metallo-beta-lactamase [uncultured archaeon GZfos37B2] Length = 446 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 115/437 (26%), Positives = 202/437 (46%), Gaps = 40/437 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 +++ + +GG E+G NM G I+ D G+ + + +DL+ Sbjct: 2 DDIGIIAVGGYNEMGRNMTAVHVG----DDIIIFDMGLRLDQVQIHEDVEIERMHSLDLI 57 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + AI TH H DH GA+ L P+ A+P+ IGL++ Sbjct: 58 KIGAIPDDTVMKGVNGTVRAIVCTHGHLDHIGAISKLAHRYRAPIIATPYTIGLIKQLIK 117 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + + AG+ +V SIE +RV HS + + + + +P G +++ D+K+ Sbjct: 118 SERKFPAENELVEMNAGETKEVSKNLSIEFIRVQHSTLDCVFIAVHTPRGILLYANDFKM 177 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D LG+ D L IG EG+ ++ +STNA G SE+ K + D+ + + Sbjct: 178 DRTPTLGEPPDIKRLKQIGKEGVFLMITESTNAAIAGKTPSERIAKAMLNDVLTGTEETE 237 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V+VTTFSS ++RI + ++IA+++ R VL+G S+ + V +A +G ++ + Sbjct: 238 SGVIVTTFSSHIARIAATLEIAKKMDRIPVLMGRSMDKYVKLAAKMGYVQLPEDLRIYGM 297 Query: 286 FGLYP----------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 +E+ + I TG QGEP + L ++S K+ D +IFS+ Sbjct: 298 RKNIDKAFTRIASEGKEKYLPIVTGHQGEPGAVLERISMDN-TGYKIESGDKIIFSANVI 356 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P ++ +L+ +G R+ VHVSGH D + + I P+ ++ HG Sbjct: 357 PTPSTRANRHALETKLMMRGARIYDG-----VHVSGHASKEDHWELLRMINPEHVIPAHG 411 Query: 394 EPLHLVAHKELALQEGI 410 + ++ E+A G Sbjct: 412 NLVMHSSYIEMAESTGY 428 >gi|15669052|ref|NP_247856.1| hypothetical protein MJ_0861 [Methanocaldococcus jannaschii DSM 2661] gi|2842578|sp|Q58271|RNJ_METJA RecName: Full=Ribonuclease J; Short=RNase J gi|1591546|gb|AAB98866.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 448 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 120/438 (27%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 +L + +GG E+G NM + I++D G+ L ++L+ Sbjct: 1 MKLEIIAIGGYEEVGRNMTAV----NVDGEIIILDMGIRLDRVLIHEDTDISKLHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 P+ T + + AI ++H H DH GA+ L + P+ +P+ I L++ Sbjct: 57 EKGIIPNDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHRYNAPIIGTPYTIELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I AG+ +D+ ++E +R+ HSIP+++ V+ +P G+IV+ D+K Sbjct: 117 SEKKFDVRNPLIVLNAGESIDLTPNITLEFIRITHSIPDSVLPVLHTPYGSIVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAK 225 D+ ++G+ D ++ +G G+L + ++T EG E + + N K Sbjct: 177 DNFPVVGERPDYRAIKKVGKNGVLCFISETTRINHEGKTPPEIIASGLLKNDLLAADNDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTFSS ++RI+SI DIAE++GR VLLG S+ R +A D+G++K + Sbjct: 237 HGIIVTTFSSHIARIKSITDIAEKMGRTPVLLGRSMMRFCGIAQDIGLVKFPEDLRIYGD 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 E+ ++IATG QGE + L++++ + K + D V+FS+ I Sbjct: 297 PSSIEMALKNIVKEGKEKYLIIATGHQGEEGAVLSRMATNKTPY-KFEKYDCVVFSADPI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N +++RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYMLESRLKLLGVRIF-----KGAHVSGHAAKEDHRDMLRWLNPEHIIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTAEYTKLAEEEGYR 428 >gi|298674297|ref|YP_003726047.1| RNA-metabolising metallo-beta-lactamase [Methanohalobium evestigatum Z-7303] gi|298287285|gb|ADI73251.1| RNA-metabolising metallo-beta-lactamase [Methanohalobium evestigatum Z-7303] Length = 447 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 118/449 (26%), Positives = 204/449 (45%), Gaps = 40/449 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 ++ + +GG E+G NM G I++D G+ + + ++L+ Sbjct: 3 DIGIIAVGGYNEMGRNMTAIRVG----EDIIILDMGLRLDRVQIHEDVEINKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV- 110 PD T + + + AI TH H DH GA+ L P+ ++P+ L++ + Sbjct: 59 MGAIPDDTIMKEINGTVRAIVCTHGHLDHIGAIPKLAHRYAAPIISTPYTTSLIKQQIES 118 Query: 111 YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + K ++ AG V SIE +R HSI + + VI +P G I++ D+KLD Sbjct: 119 EVKFGVKNKIVTLNAGGIYQVTEDISIEFIRAQHSIIDCVFAVIHTPDGAILYACDYKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 +G+ D D L ++G EG+LA++ +STN+ G SE+ + D+ + + Sbjct: 179 RMPTMGEQPDFDRLKSLGEEGVLAMITESTNSGVPGKTPSERIAHDLVRDVLLGTEESDV 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 ++VTTF+S ++RI SII A ++GR VL+G ++ V A +G I+ + Sbjct: 239 GMIVTTFASHIARINSIIKFAAEMGRTPVLIGRAMDNYVLTAKKLGYIELPDNIEVYGAR 298 Query: 287 GLYP----------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 +++ + I TG QGEP + L +++ GE + D VIFS+ IP Sbjct: 299 KDVDKALKKIVNKGKDKYLPIVTGHQGEPGAILPRIANGETPY-TIESGDKVIFSANVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 E ++ +L +G R+ VHVSGH D + + I P+ ++ HG Sbjct: 358 SPMTEGNRYSLETKLKMRGARLFT-----DVHVSGHACKEDHWELLRIINPEHVIPAHGT 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLR 423 ++ E+A G + + Sbjct: 413 INMHSSYIEMAEDAGYVLGNTLHLLRNGE 441 >gi|116753786|ref|YP_842904.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116665237|gb|ABK14264.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 446 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 123/435 (28%), Positives = 209/435 (48%), Gaps = 38/435 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGVDLV-- 54 + + +GG EIG NM G I++D G+ + + L DL+ Sbjct: 4 IGIMAVGGYDEIGRNMTAIRVG----NDIIIMDMGIRLDRVQIHEDTDVESLHSSDLIAM 59 Query: 55 --FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 PD + + + AI TH H DH GA+ L P+ A+PF L+ + E Sbjct: 60 GAIPDDSVLNGVASKVRAIVCTHGHLDHIGAVSKLAHKYRAPIIATPFTADLVNQEIKAE 119 Query: 113 RVSK-KIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 R+ + IS +AG++ V +E +RV HSI + + + + G I++ D+K+D Sbjct: 120 RIFRVNNEVISLRAGERYQVTPDIELEFIRVQHSIVDCVFAALHTKHGTILYANDFKIDR 179 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKGC 227 LG+ D L +G EG+LAL+ ++TNA G SE+ K ++D+ + + Sbjct: 180 SPTLGEPPDFPRLRQLGREGVLALITETTNAGISGKTPSEQIAKDLVWDVLMGTEETESG 239 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII----------KKD 277 +LVTTFSS ++RI++II+ A ++GRK +LLG S+++ A+ G ++ Sbjct: 240 ILVTTFSSHIARIKAIIEAARKMGRKPILLGRSMEKYWGTAVRTGYAERGNGLAVCGRRK 299 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG 337 + + + + +++ + I TG QGEP + L++++ GE ++ D VIFS+ IP Sbjct: 300 AVDKALKRMMVEGKDKYLPIMTGHQGEPGAILSRIANGE-TEFRVESGDRVIFSAGIIP- 357 Query: 338 NEVAIGHIKNR-LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 ++ NR VE +++ VHVSGH D + + I P+ ++ HG Sbjct: 358 ---QPLNMSNRHTVETKLKMKGARIYDNVHVSGHACREDHWELLRMINPEHVIPSHGNLN 414 Query: 397 HLVAHKELALQEGIA 411 + LA G Sbjct: 415 SHGQYLMLAEDTGYK 429 >gi|307352923|ref|YP_003893974.1| RNA-metabolising metallo-beta-lactamase [Methanoplanus petrolearius DSM 11571] gi|307156156|gb|ADN35536.1| RNA-metabolising metallo-beta-lactamase [Methanoplanus petrolearius DSM 11571] Length = 448 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 112/438 (25%), Positives = 205/438 (46%), Gaps = 38/438 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGVDLV 54 ++ + +GG E+G NM G ++ ++ D G+ + +++ +DL+ Sbjct: 1 MDIEIIAVGGYNEVGRNMTAVRVG----KEIVIFDMGLRLDQIMIHEDAEVENMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + ++ AI TH H DH GA+ L + P+ +P+ L+E + Sbjct: 57 EMKAIPDDTIMNTVEGSVKAIVCTHGHLDHIGAIPKLAHRYNAPIIGTPYTAKLIEQQIE 116 Query: 111 YERV----SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E+ +K + + +IE V + HSI +T V+ +P G IV+ D+ Sbjct: 117 GEKKFGVNNKVFALRAGKKYRYEISKDLNIEFVNIQHSIIDTAMAVLHTPQGAIVYALDF 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 KLD +LG+ D + +G EG++AL+ +STN G C SE+ +K + D+M + Sbjct: 177 KLDRTPVLGNPPDIARMQELGREGVIALIVESTNVRLPGRCPSERVAQKLVRDVMTSYED 236 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 K ++V+TFSS ++R+++I + A +IGRK VLLG S++R S A + + + Sbjct: 237 DKNAIIVSTFSSHIARVKTIAECAHEIGRKPVLLGRSMERYSSTAEQLKQVGFPETLSMF 296 Query: 284 ESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + R ++ + I TG QGEP + L ++++G ++ + D V++S+ Sbjct: 297 GNRKTVDRVIRRMIKEGKDKYVPIVTGHQGEPGATLTRIAQGNSPY-RIDKGDKVLYSAN 355 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 IP ++ + + +HVSGH D + + PQ ++ HG Sbjct: 356 VIPNPMNYGQRYHQEVLLK---MRGARIFEGLHVSGHGQREDHYEVIHLLNPQHVIPAHG 412 Query: 394 EPLHLVAHKELALQEGIA 411 + + +L + G Sbjct: 413 DVDMTGDYIKLLEECGYT 430 >gi|296109425|ref|YP_003616374.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus infernus ME] gi|295434239|gb|ADG13410.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus infernus ME] Length = 448 Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats. Identities = 118/438 (26%), Positives = 210/438 (47%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 +L + +GG E+G NM + I++D GV L ++L+ Sbjct: 1 MKLEIVAIGGYEEVGRNMTAI----NVDGEIIIMDMGVRLDRVLIHEDTDISKLHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 P+ T + + AI ++H H DH GA+ L + P+ +P+ I L++ Sbjct: 57 EKGIIPNDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHRYNAPIIGTPYTIELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P + AG+ +D+ ++E +R+ HSIP+++ V+ +P G IV+ D+K Sbjct: 117 SEKKFDVRNPLVVLNAGESIDLTPNITLEFIRITHSIPDSVLPVLHTPYGAIVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAK 225 D+ ++G+ D ++ +G G+L + ++T EG E + + N K Sbjct: 177 DNFPVVGERPDYRAIKRVGKNGVLCFISETTRINHEGKTPPEIIASGLLKNDLLATDNEK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V+VTTFSS ++RI+SI++IAE++ R VLLG S+ R +A D+G++K Sbjct: 237 NGVIVTTFSSHIARIKSIVEIAEKMNRTPVLLGRSMMRYCGIAQDIGLVKFPDDLRIYGD 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 E +++ATG QGE + L++++ + + K D V+FS+ I Sbjct: 297 PSSIEMALKMIMKEGKENYLIVATGHQGEEGAVLSRMATNK-TSYKFDRYDCVVFSADPI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N +++RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYMLESRLKLLGVRIF-----KGAHVSGHASKEDHRDMLRWLNPEHIIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTAEYTKLAEEEGYR 428 >gi|242399211|ref|YP_002994635.1| Metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] gi|242265604|gb|ACS90286.1| Metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] Length = 440 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 124/432 (28%), Positives = 202/432 (46%), Gaps = 38/432 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKD----DLPGVDL--- 53 + +GG E+G NM Y + I+ID G V +D + DL Sbjct: 2 IKVYTIGGYEEVGKNMTAIEY----ENEVIIIDMGIRLDRVLIHEDVNFQKMSSRDLKKL 57 Query: 54 -VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAK-RV 110 PD T I K ++AI ++H H DH GA+ L +VP+Y +P+ I L + + R Sbjct: 58 GAIPDDTIIKN--KKVVAIALSHGHLDHIGAIAKLAPHYSNVPIYGTPYTIKLAKGEVRS 115 Query: 111 YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + P Q G+ V V +IE V+V HSIP + +V+ +P G +V+ D+K D Sbjct: 116 EQYFEVTNPMYETQYGEIVQVSENLTIEFVQVTHSIPHSSIVVVHTPEGAVVYACDYKFD 175 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK---NAKG 226 + LG+ D L IG EG+ L+ +ST SE K + D + Sbjct: 176 NHNPLGENPDYKRLKEIGQEGVKILIPESTRVAEATKTPSEASAKLLLEDFFYYEGMEEK 235 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE-- 284 ++ TTF+S ++R++ +I+IA +GR+ VL+G SL + +A +G+IK Sbjct: 236 GLITTTFASHIARLQELIEIANNMGRQAVLIGRSLAKYTGIAKQLGLIKMKGAKAVKSPA 295 Query: 285 ------SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 RE ++I TG QGEP + L +++ GE+ ++ + P N Sbjct: 296 AVQKTLREVSQARENYLLIVTGHQGEPGAVLTRMANGELYDIGKTDTVIFSAGVIPNPLN 355 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 ++ +L +GVR++ +HVSGH D + + + + P+ ++ HGE L Sbjct: 356 IAQRYALETKLRMRGVRMV-----KDLHVSGHSSREDHRYLIKLLNPENMIPAHGEFRML 410 Query: 399 VAHKELALQEGI 410 + ELA +EG Sbjct: 411 THYAELAEEEGY 422 >gi|330508370|ref|YP_004384798.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP-6] gi|328929178|gb|AEB68980.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP-6] Length = 445 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 41/440 (9%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGV 51 MK+ + + +GG EIG NM G + +++D G+ + + L Sbjct: 1 MKD--IAIIAVGGYNEIGRNMTAIRIG----KDIVVMDMGIRLDRVQIHEDTDVESLHAA 54 Query: 52 DLV----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 DL+ PD + + + AI TH H DH GA+ L H P+ ASPF L+ Sbjct: 55 DLINIGAIPDDSIMENVDGKVRAIACTHGHLDHIGAISKLAHKYHAPIIASPFTADLINQ 114 Query: 108 KRVYERVSK-KIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + E++ P + AG++ V +E VRV HSI + + I +P G I++ D Sbjct: 115 EIKSEKIFGVNNPLKTMNAGERFQVTPDIDLEFVRVQHSIVDCVFAAIHTPKGIILYAND 174 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MK 222 +K+D LG+ D L A+G EG+LAL+ ++TNA G SE+ K + D+ + Sbjct: 175 FKIDRSPTLGEPPDFARLRALGKEGVLALITETTNAAISGKTPSEQIAKDLVMDVLIGTE 234 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 ++ V+VTTFSS ++RIR+II+ A ++GRK VLLG S+++ A+ G ++ ++ + Sbjct: 235 ESRSGVMVTTFSSHIARIRAIIEAAHKMGRKPVLLGRSMEKYWGTAVRTGYAQQGEVSVF 294 Query: 283 DESFGLYP---------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + +++ + I TG QGEP + L++++ GE + + D VIFS+ Sbjct: 295 GRRKSVDKALKRIMSEGKDKYLPIMTGHQGEPGAILSRVANGETDFL-VDSGDRVIFSAG 353 Query: 334 AI--PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 I P NE + +L +G R+ VHVSGH D + + I P+ ++ Sbjct: 354 IIPQPLNESNRHTVVTKLKMRGGRIYDN-----VHVSGHACREDHWELLRMINPEHVIPS 408 Query: 392 HGEPLHLVAHKELALQEGIA 411 HG ++ +A + G + Sbjct: 409 HGTLRSHGSYLMMAEETGYS 428 >gi|150401608|ref|YP_001325374.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014311|gb|ABR56762.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 448 Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats. Identities = 120/438 (27%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D G V +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NVDGEIIIFDIGLRLDRVMIHEDTDVSKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI ++H H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGIIPDDTVMKNIEGEVKAIVLSHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + P I+ A D +D+ S+E V+ HSIP+ + V+ +P G +++ D+K Sbjct: 117 SERKFDIRNPLITLNAKDTMDLTSNLSLEFVKATHSIPDAVLPVLHTPYGAVLYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAK 225 D+ I+G+ D +L +G +G+L ++ +ST EG SE + + N K Sbjct: 177 DNIPIVGERPDYRALKRVGKKGVLCMISESTRVDFEGKTPSEGHAANLLKNDLLWTDNEK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V++TTFSS ++RI+SI DIAE++GR VL+G S+ + +A D+GI+K + Sbjct: 237 NGVVITTFSSHIARIKSITDIAERMGRTPVLIGRSMSKYCGIAEDIGIVKFPENTRMAGD 296 Query: 286 F----------GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 +E+ +++ TG QGE + L++++ ++ + + D V+FS+ I Sbjct: 297 PTSVERTLNQVMKDGKEKYLLVVTGHQGEEGAVLSRMATNKLP-FRFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + M +W+ P+ ++ HG Sbjct: 356 PNPMNAAQRYLLEARLGLMGVRLF-----KGAHVSGHAAKEDHRDMLRWLNPEHIIPAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTSKYAKLAEEEGYR 428 >gi|45357607|ref|NP_987164.1| beta-lactamase domain-containing protein [Methanococcus maripaludis S2] gi|45047167|emb|CAF29600.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 448 Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D GV +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGVRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ + G+K+D+ ++E V++ HSIP+ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPYGAVVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D +L IG +G++A++ +ST EG SE + + N Sbjct: 177 DNFPVVGEKPDYKALKRIGKQGVIAMVSESTRVDFEGKTASEGVAANLLKNDLLGTDNED 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V+VTTFSS ++RI+SI DIA ++GR VL+G S+ + +A D+G Sbjct: 237 NAVVVTTFSSHIARIKSITDIASKMGRIPVLVGRSMSKYCGIAQDIGLVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +E +++ TG QGE + L++++ + + + D V+FS+ I Sbjct: 297 PSSIDKTFHQIMKDGKENYLMVVTGHQGEEGAVLSRMATNKTP-FRFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W++P+ L+ HG Sbjct: 356 PNPMNAAQRYLLEARLNLAGVRLF-----KGAHVSGHAAKEDHRDILRWLQPEHLIPAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + A+ +LA +EG Sbjct: 411 DFNLTSAYAKLAEEEGFR 428 >gi|154151749|ref|YP_001405367.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|154000301|gb|ABS56724.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 445 Score = 229 bits (585), Expect = 7e-58, Method: Composition-based stats. Identities = 117/437 (26%), Positives = 205/437 (46%), Gaps = 40/437 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------DDLPGVDLV 54 ++ + +GG E+G NM G ++ ++ D G+ + +++ +DL+ Sbjct: 1 MDIEIIAVGGYDEVGRNMTAVRCG----KEIVIFDMGLRLDQVMIHEDAELENMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + AI +H H DH GA+ L + P+ A+P+A L+ + Sbjct: 57 KIGAIPDDTMMNSVEGTVKAIVCSHGHLDHIGAIPKLAHRYNAPIIAAPYATELIRQQIS 116 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + + G + + +E VR HSI +T+ V+ +P G IV+ D+KL Sbjct: 117 GEQKFGVNNKLFALKPGQRYTISQHLVLEFVRAQHSIIDTVTPVLHTPHGAIVYACDFKL 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D ++G+ D L IG EG+LAL+ +ST R G C SE+ + + D+ ++ K Sbjct: 177 DRTPVIGEPPDFARLRQIGKEGVLALIVESTYVDRPGRCPSERIARDLVRDVITSYEDDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++V+TFSS ++R+++I + A +IGRK VLLG S+++ A + ++ Q + Sbjct: 237 SSLIVSTFSSHIARVKTIAECAHEIGRKPVLLGRSMEKYAVTAEQMKMVSLPQDTGIFGN 296 Query: 286 FGLYPRE----------QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 R + + I TG QGEP S L +L+ G+ ++ + D ++FS+ I Sbjct: 297 RRTVDRTLRRIMKEGKGKFLPIITGHQGEPGSILTRLALGDTPY-QITKGDKILFSANVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ L G R+ +HVSGH Y D + PQ ++ HG Sbjct: 356 PNPMNFGQRYMVEAHLKMAGARLF-----PDLHVSGHAYREDHYEFVSLLNPQHIIPAHG 410 Query: 394 EPLHLVAHKELALQEGI 410 ++ E G Sbjct: 411 NIRMTGSYAEFTKDLGY 427 >gi|290559146|gb|EFD92508.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|326422519|gb|EGD71915.1| Beta-lactamase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 443 Score = 229 bits (584), Expect = 9e-58, Method: Composition-based stats. Identities = 128/435 (29%), Positives = 192/435 (44%), Gaps = 39/435 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---------------VSFPKDDLPG 50 + GG +IG +M + ++ D G +S Sbjct: 2 IKVKAFGGYNKIGKSMTAI----DVDGEIVITDMGADIERLVNFEEDKNDISISDLTALI 57 Query: 51 VDLVFPDI-TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 + V PD F MKE K + AI +TH H DH A+ L PV A+PFAI ++E Sbjct: 58 DNGVIPDDRDFFMKEGKKVKAIVLTHGHLDHIWAVPFLSQKYMCPVIATPFAIKIIENLM 117 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ +E V + HSIP + + + + G IV+ DWK D Sbjct: 118 KNFKIKSVRLIPLNTGTSYKISDNIKLELVNITHSIPNSSLIALHTKYGVIVYANDWKFD 177 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--KGC 227 ++ LG D D L A+ EGI L+ DSTNA +G SE +K + DI+K Sbjct: 178 NNPTLGKKPDYDKLEALRKEGIFLLISDSTNADVDGYTFSESIVKTMLEDIIKKTLDNKT 237 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE--- 284 + ++TFSS ++RI++I +I+ ++ R +++ G S+ + AI +I K L Sbjct: 238 IFISTFSSHIARIKNITEISRKLNRNVMIFGRSMDMYIKSAISTSVINKGTLPEVAFRRE 297 Query: 285 ------SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR--AIP 336 + ++I TG QGE + L +L G+ +L+ D VIFSSR P Sbjct: 298 QINGLLKHVYDKPGKYVIICTGHQGEKGAFLDKLVTGQY-GYRLSGDDAVIFSSRTIPTP 356 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 NE G + N L V V VHVSGH ND K M + + P+ L+ HG Sbjct: 357 LNEANKGMLMNALESLNVNVADN-----VHVSGHASKNDHKLMIKMLMPKHLIPSHGGID 411 Query: 397 HLVAHKELALQEGIA 411 + A+ ELA + G Sbjct: 412 KMSANIELAREFGYE 426 >gi|294496200|ref|YP_003542693.1| beta-lactamase [Methanohalophilus mahii DSM 5219] gi|292667199|gb|ADE37048.1| beta-lactamase domain protein [Methanohalophilus mahii DSM 5219] Length = 447 Score = 229 bits (584), Expect = 9e-58, Method: Composition-based stats. Identities = 123/449 (27%), Positives = 210/449 (46%), Gaps = 40/449 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV- 54 EL + +GG E+G NM K I+ID G+ D + ++L+ Sbjct: 3 ELGIVAVGGYNEMGRNMTAIR----VDDKIIIIDMGLRLDRVQIHEDVEIDKMHSLELIE 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-V 110 PD T + + N+ AI TH H DH GA+ L P+ +P+ L++ + Sbjct: 59 MGAIPDDTIMKEIDGNVCAIVCTHGHLDHIGAISKLAHRYAAPIIGTPYTSALIQHQIDS 118 Query: 111 YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + K IS +AG V SIE +R HSI + + + I +P G I++ D+KLD Sbjct: 119 ERKFGVKNRIISVKAGGTYQVSDDVSIEMIRTQHSIIDAVFVAIHTPRGAILYACDFKLD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 LG+ D L +G EG++A++ +STNA R G SE+ + D+ + + Sbjct: 179 RTPTLGEPPAFDRLRELGKEGVVAMIAESTNATRAGKTPSERIAHDMVRDVLLGTEESDV 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 +++TTF+S ++R+ SI+ A ++ R +LLG S+ R V+ A ++G I+ + + Sbjct: 239 GMIITTFASHIARLNSIMQFATEMKRTPILLGRSMDRYVNTARELGYIELPKKTEIYGNR 298 Query: 287 GLYP----------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 +++ + I TG QGEP + L++++ G+ K+ D VIFS+ IP Sbjct: 299 KDIDKAFRKIMDKGKDKYLPIVTGHQGEPGAILSRVANGDTAY-KIESGDKVIFSANTIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + ++ +L +G R+ VHVSGH Y D + + + P+ ++ HG Sbjct: 358 TPMTQANRYALETKLKMKGARLYDN-----VHVSGHAYREDHWELIRLVNPENVIPAHGH 412 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLR 423 A+ E+A G + + Sbjct: 413 IDMHSAYIEMAEDAGYELGHTLHLLRNGE 441 >gi|84489655|ref|YP_447887.1| hydrolase [Methanosphaera stadtmanae DSM 3091] gi|84372974|gb|ABC57244.1| predicted hydrolase [Methanosphaera stadtmanae DSM 3091] Length = 447 Score = 229 bits (584), Expect = 9e-58, Method: Composition-based stats. Identities = 120/438 (27%), Positives = 209/438 (47%), Gaps = 39/438 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 + + +GG EIG NM + ++ D G+ + +DL+ Sbjct: 1 MTIEVIAVGGYEEIGKNMTAI----KVNDDVVIFDMGIHLDRLHIHEDTDISRMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + + + AI TH H DH GA+ L P+ A+P+ + L+E Sbjct: 57 ERGVIPDDTLMREVDGKVRAIVCTHGHLDHIGAIAKLAHRYEAPIIATPYTLALIEKTIK 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P S G+K+ + ++E VR HSIP+T+ + +P G I++ D+K Sbjct: 117 GERKFKVNNPLKSVNPGEKIQISPNLTLEFVRTTHSIPQTITAALHTPEGAIIYANDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK---N 223 D+ ++ D +G +G+ + D+TN + SEK + + D++K Sbjct: 177 DNHQMVSPPPDYRRFRELGKKGVKVAIMDTTNIKEKQQSKTHSEKITRDLLKDVLKGPLE 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 + ++VTTFSS + RI++I IAE+ RKI++LG S++R S+A +GI+ + Sbjct: 237 ERKGLIVTTFSSHIERIQAITKIAERSRRKIMILGRSMERYCSLAESMGILNLPRNVSVY 296 Query: 284 ESFG---------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + R + +++ TG QGEP + L +++ + N ++ D V+FS+ Sbjct: 297 GNSKSINKALARANDHRSKYMLLVTGHQGEPDALLPRIANNK-TNFEIKPGDNVVFSAST 355 Query: 335 IPGNEVAIGHIKNR-LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 IP ++ NR L+++ ++ VHVSGH P D++ + ++PQ L+ HG Sbjct: 356 IP----NPINLANRDLLDRRLKERGARIYNNVHVSGHAGPEDMREFIRMLQPQHLIPAHG 411 Query: 394 EPLHLVAHKELALQEGIA 411 + HL A ELA +EG Sbjct: 412 DLSHLAAFVELAEEEGYK 429 >gi|41615250|ref|NP_963748.1| hypothetical protein NEQ466 [Nanoarchaeum equitans Kin4-M] gi|40068974|gb|AAR39309.1| NEQ466 [Nanoarchaeum equitans Kin4-M] Length = 444 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 33/430 (7%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV------SFPKDDLPGVD----- 52 ++ +GG EIG NM G +W++ID GV +F KD V+ Sbjct: 1 MKIEVRAVGGYNEIGANMTAIGI----DDEWLIIDMGVHVDKMLAFQKDQEEVVEWNREL 56 Query: 53 ----LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 P I +I + + AI ITH H DH GA+ L + P+ P+AI L+ + Sbjct: 57 LEKINALPKIEYIEDIKDKVKAILITHGHLDHIGAVIHLAYEFNAPIIGPPYAIELIRSF 116 Query: 109 RVYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 ++ + + S++ + HSIP + L I +P G I +GD+K Sbjct: 117 EKDYKIILPNEMKKINLNSSIQISDKISVDFIYATHSIPHSAHLAIHTPKGVIFFSGDYK 176 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKG 226 D+ ++G + + L I EG++ +ST A + SE ++ + D+ + +G Sbjct: 177 FDNFPVIGQRYNLEKLKEIAKEGVILAFIESTRADEDKRSYSEIIAREMLRDVLFEEHEG 236 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--------IKKDQ 278 +++TTFSS ++R++S+++++ ++ R + +LG S+ + V +A +GI I + Sbjct: 237 LIIMTTFSSHIARLKSMVELSLELDRDVYILGRSMVKNVEIAEKLGIYKFSDKAKIYQYH 296 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 ++ + R + +I TG+QGEP S L +++ + +L +KDTVIFS IP Sbjct: 297 DQIARLLKKIDDRSKYALIVTGNQGEPGSVLWRMAFEKFP-FRLDKKDTVIFSCFTIPN- 354 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 AI L+E+ ++ VHVSGH +D R+ + ++PQ+++ HG+ + Sbjct: 355 --AINIAFRNLIEEKIKSFGTRIIKDVHVSGHAMRDDHYRLIKILKPQIIIPNHGDFIKR 412 Query: 399 VAHKELALQE 408 A +LA+ E Sbjct: 413 GALADLAMNE 422 >gi|257053116|ref|YP_003130949.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256691879|gb|ACV12216.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 447 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 127/439 (28%), Positives = 204/439 (46%), Gaps = 41/439 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVIFDMGLNLSKVLIHDNVETERMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + + ++ AI TH H DH GA+ L P+ A+PF I L++ + Sbjct: 57 DMGAIPDDRVMSEIEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIMATPFTIELVKQQIQ 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 E+ + + AG +G +E V V HSI + + V+ +P G IV+ D + Sbjct: 117 GEEKFGVENDLVKMDAGATTSIGDDGVELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKR 176 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNA 224 +D D ++GD D D IG EG+L + D TNA ++G SE +K++ D+ M++ Sbjct: 177 MDHDPVVGDPIDMDRFREIGEEGVLCYIEDCTNAGKKGRTPSESVARKHLKDVMYSMEDY 236 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 G ++ TTFSS ++R++S+++ A+ IGR+ VLLG S+++ A + ++ + Sbjct: 237 DGGIVATTFSSHIARVKSLVEFADDIGRQPVLLGRSMEKYSGTAERLDFVEFPEDLGMYG 296 Query: 285 SFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR- 333 R E + I TG QGEPR+ L ++ RG+ +L E D VIFS+R Sbjct: 297 HRKSVDRTFKRIMSEGKENFLPIVTGHQGEPRAMLTRMGRGDTPY-ELEEGDKVIFSARV 355 Query: 334 -AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 P NE + L QG R+ E VHVSGH M + P+ ++ H Sbjct: 356 IPEPTNEGQRYQSETLLKMQGARIYDE-----VHVSGHLNREGHYEMLNTLEPEHIIPAH 410 Query: 393 GEPLHLVAHKELALQEGIA 411 + ELA EG Sbjct: 411 QSMGGFAPYVELAESEGYE 429 >gi|134046662|ref|YP_001098147.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132664287|gb|ABO35933.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 448 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D GV +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGVRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ + G+K+D+ ++E V++ HSIP+ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPYGAVVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D +L IG +G++A++ +ST EG SE + + N Sbjct: 177 DNFPVVGEKPDYRALKRIGKQGVIAMVSESTRVDYEGKTASEGVAANLLKNDLLGTDNED 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V+VTTFSS ++RI+SI DIA ++GR VL+G S+ + +A D+G Sbjct: 237 NAVVVTTFSSHIARIKSITDIASKMGRIPVLVGRSMSKYCGIAQDIGLVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +E ++I TG QGE + L++++ + + + D V+FS+ I Sbjct: 297 PSSIDKTFHQVMKDGKENYLMIVTGHQGEEGAVLSRMATNK-TAFRFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W++P+ L+ HG Sbjct: 356 PNPMNAAQRYLLEARLKLAGVRLF-----KGAHVSGHAAKEDHRDILRWLQPEHLIPAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + ++ +LA +EG Sbjct: 411 DFNLTSSYAKLAEEEGFR 428 >gi|150402964|ref|YP_001330258.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150033994|gb|ABR66107.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 448 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 214/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D GV +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGVRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ + G+K+D+ ++E V++ HSIP++ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLENGNKLDLTANITLEFVKITHSIPDSAMAVLHTPYGAVVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D +L IG +G++A++ +ST EG SE + + N Sbjct: 177 DNFPVVGEKPDYKALKRIGKQGVIAMVSESTRVDFEGKTASEGVAANLLKNDLLGTDNED 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V+VTTFSS ++RI+SI DIA ++GR VL+G S+ + +A D+G Sbjct: 237 NAVVVTTFSSHIARIKSITDIASKMGRIPVLVGRSMAKYCGIAEDIGLVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +E +++ TG QGE + L++++ + + + D V+FS+ I Sbjct: 297 PSSIDKTFHQIMKDGKENYLMVVTGHQGEEGAVLSRMATNK-TAFRFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W++P+ L+ HG Sbjct: 356 PNPMNAAQRYLLEARLKLAGVRLF-----KGAHVSGHAAKEDHRDILRWLQPEHLIPAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + A+ +LA +EG Sbjct: 411 DFNLTSAYAKLAEEEGFR 428 >gi|284165810|ref|YP_003404089.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015465|gb|ADB61416.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 450 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 120/442 (27%), Positives = 203/442 (45%), Gaps = 44/442 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVIFDMGLNLSQVLIHDNVETERMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L + P+ A+PF I L++ + Sbjct: 57 DMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYNAPIVATPFTIELVKQQIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++ + I AG+ + +G +E V V HSI + + V+ +P G +V+ D Sbjct: 117 GEQKFGVENDLIKMDAGETMSIGDSGKVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDI---M 221 ++D ++GD D + IG E G+L + D TNA ++G SE ++++ D+ + Sbjct: 177 RMDHTPVIGDPIDMERFREIGREGNGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSI 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS +SR+ S+++ A+ IGR+ VLLG S+++ A + + Sbjct: 237 EDYDGGIVATTFSSHISRVTSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + I TG QGEPR+ L +++RGE +L + D V+FS Sbjct: 297 MFGHRKSVDRTFKRIMNEGKENYLPIVTGHQGEPRAMLTRMARGETPY-ELDDGDKVVFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 +R P NE + L QG RV +HVSGH M ++PQ ++ Sbjct: 356 ARVIPEPTNEGQRYQAEKLLGMQGARVYD-----DIHVSGHLNQEGHYEMLDALQPQHII 410 Query: 390 AIHGEPLHLVAHKELALQEGIA 411 H + ++ L EG Sbjct: 411 PAHQDMSGYSSYVNLCESEGYQ 432 >gi|297619911|ref|YP_003708016.1| beta-lactamase domain-containing protein [Methanococcus voltae A3] gi|297378888|gb|ADI37043.1| beta-lactamase domain protein [Methanococcus voltae A3] Length = 448 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 118/438 (26%), Positives = 212/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D G+ +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGIRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + PV +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAVTKLAHRYNAPVIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ G+K+++ ++E V++ HSIP++ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLDNGNKLEITPNITLEFVKITHSIPDSTMAVLHTPYGAVVYANDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D S+ +G +G++A++ +ST EG SE + + N K Sbjct: 177 DNFPVVGEKPDYKSIKKVGKQGVVAMISESTRVGYEGKTPSEGVAASLLKNDLLGTDNDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V+VTTFSS ++RI+S+ DIA ++GR VL+G S+ + +A D+G Sbjct: 237 NAVVVTTFSSHIARIKSLTDIAVKMGRTPVLVGRSMAKYCGIAQDIGIVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + + +E ++I TG QGE + L+++ + K + D V+FS+ I Sbjct: 297 PSSIDKTLNTIMKDGKENYMMIVTGHQGEEGAVLSRMITNK-TAFKFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W+ P+ L+ HG Sbjct: 356 PNPMNSAQRYLLEARLKLAGVRLF-----KGAHVSGHAAKEDHRDILRWLNPEHLIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + +LA +EG Sbjct: 411 DFNLTSEYAKLAEEEGYR 428 >gi|268325642|emb|CBH39230.1| conserved hypothetical protein, metallo-beta-lactamase family [uncultured archaeon] gi|268326112|emb|CBH39700.1| conserved hypothetical protein, metallo-beta-lactamase family [uncultured archaeon] Length = 429 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 118/430 (27%), Positives = 198/430 (46%), Gaps = 41/430 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVD----------L 53 + + +GG E+G NM + ++ D G+ K D G + Sbjct: 1 MEVIAVGGYEEVGRNMTAVR----VDNEVLIFDMGLCLDKLQDGEEGQESYTTKQLIAMG 56 Query: 54 VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER 113 V PD + I +K+++AI +H H DH GA+ L S P+ + + I L+ Sbjct: 57 VIPDDSVIP--KKDVVAIVCSHGHLDHIGAVDRLASTYQCPIIGTQYTIELIR------G 108 Query: 114 VSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 ++K ++ G+ D+ F++E V V HSIP + +R+P G+IV+ D+K D+ Sbjct: 109 MTKNQELVTLNPGEVHDISPNFALELVHVTHSIPHSTIAAVRTPEGSIVYANDFKFDNYP 168 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 IL TD L +G EG+ L+C+S G SE ++ + D+M + + + Sbjct: 169 ILDTKTDYSKLKKLGKEGVKLLICESVRVQEGGKSASESVARELLKDLMVPDESTYFLAS 228 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF------ 286 FSS ++RI SI + A+++GR+ V LG SLK VS A +GII + + Sbjct: 229 FSSHIARIHSICEFAKKMGRQPVFLGRSLKFYVSTAAKLGIITLPDTVRFIDRYPKVSKF 288 Query: 287 -----GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA 341 + + +ATG+QGEP + L++++ + K + P N Sbjct: 289 LAQVSENDTSREYVFLATGNQGEPNAVLSRIAIDSPLPLTSNTKVIFASETIPSPINIAH 348 Query: 342 IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 ++ RL VR+ HVSGH D + + + ++P+ ++ HGE L A+ Sbjct: 349 REILERRLRTHSVRIY-----KDAHVSGHARREDHRDLIRMLQPENIIPSHGEIEKLAAY 403 Query: 402 KELALQEGIA 411 ELA +EG Sbjct: 404 AELASEEGYD 413 >gi|126179758|ref|YP_001047723.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862552|gb|ABN57741.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 445 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 116/438 (26%), Positives = 207/438 (47%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV 54 ++ + +GG E+G NM G ++ ++ D G+ +++ +DL+ Sbjct: 1 MDIEIIAVGGYNEVGRNMTAVRCG----KEIVIFDMGLRLDQVMIHEDADIENMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + ++ AI +H H DH GA+ L + P+ ++P+ L+ + Sbjct: 57 EMKAIPDDTIMNAVEGSVKAIVCSHGHLDHIGAIPKLAHRYNAPIISTPYTTELIRQQIA 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + +AG + + ++E V+ HSI +T+ V+ +P G +V+ D+KL Sbjct: 117 GEQKFGVNNKLFALKAGQRYTISPHLTLEFVQSQHSIIDTVFPVLHTPRGAVVYANDFKL 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D +LG D L IG EG++AL+ +S N G C SE+ + + D ++ K Sbjct: 177 DRTPVLGAPPDFARLRQIGKEGVIALITESVNIADNGRCPSERIARDLVRDTITSYEDDK 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 + V+TFSS +SR+++I + A +IGRK VLLG S++R S A + ++ + + Sbjct: 237 NALFVSTFSSHISRVKAIAECAHEIGRKPVLLGRSMERYSSAAEQLKLVGFPESLSMFGN 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 R ++ + I TG QGE + L ++ G+ KL + D ++FS++ I Sbjct: 297 RRTVDRTLRRIMKTGKDKFLPIVTGHQGESGAILTRIVMGDTPY-KLEKGDKILFSAKVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ R GVR+ E +HVSGH Y D + PQ ++ HG Sbjct: 356 PNPMNFGQRYLVEARAKMAGVRIFDE-----LHVSGHAYREDHYEFLHLLNPQHVIPSHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + + A + G Sbjct: 411 DIGMTGGYAKFAEEMGYT 428 >gi|159905290|ref|YP_001548952.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159886783|gb|ABX01720.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 448 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 117/438 (26%), Positives = 213/438 (48%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDD----LPGVDLV 54 +L + +GG E+G NM + I+ D GV +D + ++L+ Sbjct: 1 MQLEVVAIGGYEEVGRNMTAV----NIDGEIIIFDMGVRLDRIMIHEDTDISKMHSLNLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KR 109 PD T + + AI +TH H DH GA+ L + P+ +P+ + L++ Sbjct: 57 EMGVIPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREIL 116 Query: 110 VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + P I+ + G+K+D+ ++E V++ HSIP+ V+ +P G +V+ D+K Sbjct: 117 SEKKFDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPYGAVVYGNDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAK 225 D+ ++G+ D +L IG +G++A++ +ST EG SE + + N Sbjct: 177 DNFPVVGEKPDYKALKRIGKQGVIAMVSESTRVDYEGKTASEGVAANLLKNDLLGTDNED 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----------IIK 275 V++TTFSS ++RI+SI DIA ++GR VL+G S+ + +A D+G Sbjct: 237 NAVVITTFSSHIARIKSITDIASKMGRIPVLVGRSMAKYCGIAEDIGLVKFPKETKICWD 296 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +E +++ TG QGE + L++++ + + + D V+FS+ I Sbjct: 297 PSSIDKTFHQIMKDGKENYLMVVTGHQGEEGAVLSRMATNK-TAFRFEKYDQVVFSADVI 355 Query: 336 PG--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P N ++ RL GVR+ HVSGH D + + +W++P+ L+ HG Sbjct: 356 PNPMNAAQRYLLEARLKLAGVRLF-----KGAHVSGHAAKEDHRDILRWLQPEHLIPAHG 410 Query: 394 EPLHLVAHKELALQEGIA 411 + ++ +LA +EG Sbjct: 411 DFNLTSSYAKLAEEEGFR 428 >gi|289580126|ref|YP_003478592.1| beta-lactamase [Natrialba magadii ATCC 43099] gi|289529679|gb|ADD04030.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 450 Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats. Identities = 122/455 (26%), Positives = 207/455 (45%), Gaps = 44/455 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVIFDMGLNLSQVLIHDNVETERMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L P+ A+PF I L++ + Sbjct: 57 DMGAIPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++ + I AG+ + +G +E V V HSI + + V+ +P G +V+ D Sbjct: 117 GEQKFGVENDLIKMDAGETMSIGDSGKVDLEFVNVTHSIIDAINPVLHTPEGAVVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDI---M 221 ++D ++GD D + IG EG+L + D TNA ++G SE ++++ D+ M Sbjct: 177 RMDHSPVIGDPIDMERFREIGREGEGVLCYIEDCTNANKKGRTPSESVAREHLRDVLYSM 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS +SR+ S+++ A+ IGR+ VLLG S+++ A + + Sbjct: 237 EDYDGGIVATTFSSHISRVTSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + + TG QGEPR+ L +++RGE +L + D V+FS Sbjct: 297 MFGHRKSVDRTFKRIMNEGKENFLPVVTGHQGEPRAMLTRMARGETPY-ELDDGDKVVFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 +R P NE + L QG RV +HVSGH +M ++PQ ++ Sbjct: 356 ARVIPEPTNEGQRYQAEKLLGMQGARVYD-----DIHVSGHLNQEGHYKMLDALQPQNII 410 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H + L + +L EG + + L Sbjct: 411 PAHQDLKGLSGYVKLCESEGYQMGRDIHVSRNGNL 445 >gi|148643502|ref|YP_001274015.1| RNA hydrolase [Methanobrevibacter smithii ATCC 35061] gi|222445000|ref|ZP_03607515.1| hypothetical protein METSMIALI_00616 [Methanobrevibacter smithii DSM 2375] gi|261350430|ref|ZP_05975847.1| ribonuclease J [Methanobrevibacter smithii DSM 2374] gi|148552519|gb|ABQ87647.1| predicted RNA hydrolase, metallo-beta-lactamase superfamily [Methanobrevibacter smithii ATCC 35061] gi|222434565|gb|EEE41730.1| hypothetical protein METSMIALI_00616 [Methanobrevibacter smithii DSM 2375] gi|288861213|gb|EFC93511.1| ribonuclease J [Methanobrevibacter smithii DSM 2374] Length = 454 Score = 227 bits (578), Expect = 5e-57, Method: Composition-based stats. Identities = 120/462 (25%), Positives = 206/462 (44%), Gaps = 44/462 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---------KDDLPGVDLV-- 54 + + +GG E+G NM G I+ D G+ D + +DL+ Sbjct: 3 VEVIAIGGYEEVGKNMTAVKIG----EDVIIFDMGIHLDRINIHEDTDIDRMHSLDLIER 58 Query: 55 --FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-Y 111 PD T + + I +H H DH GA+ L P+ +P+ L+E + Sbjct: 59 GIIPDDTLMKDVDGKVKGIIFSHGHLDHIGAVAKLAHRYDAPLIGTPYTTALVEKQIKGE 118 Query: 112 ERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + P G K+ + ++E V+ HSIP+ + V+ +P G IV+ D+K D+ Sbjct: 119 RKFKVNNPIRPLNPGSKMKLSKNITLEFVQSTHSIPQAVFPVLHTPEGIIVYALDFKFDN 178 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK---NAK 225 + D L +G +G+L L+ ++TNA SE+ + + D+M K Sbjct: 179 HQKVSPPPDYKRLRELGRKGVLTLIVETTNAKNTEEVKTYSERIARNILEDVMHGPLYEK 238 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTF+S + R+++I DIA++ R+I LG S++R +A GI+K + S Sbjct: 239 KGMIVTTFASHIERVQAIADIAKKSHREIYFLGRSMERFCGIAQKQGILKLPKNASIYGS 298 Query: 286 FG---------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 RE+ +++ TG QGEP + L +++ + E D VI S+ IP Sbjct: 299 PKAVNKALMRADEDREKYLLVTTGHQGEPDALLPRIASNRTP-FNIKEGDNVIISAPIIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++++L +G R+ HVSGH D + + ++PQ ++ HG+ Sbjct: 358 NPTNAANRHIMESKLRSKGARIY-----SNAHVSGHAGREDHREFLRMLKPQHIIPAHGD 412 Query: 395 PLHLVAHKELALQEGIA---CVPPVRNGKMLRLFPDPIEIID 433 L A+ ELA +EG V +RN + + + Sbjct: 413 LSMLAAYGELAEEEGYRIGYNVHILRNSQAQVFENERAHGGN 454 >gi|76802485|ref|YP_327493.1| hydrolase [Natronomonas pharaonis DSM 2160] gi|76558350|emb|CAI49940.1| predicted hydrolase [Natronomonas pharaonis DSM 2160] Length = 446 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 40/438 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEVEIATIGGYEEVGRQMTAVRAG----DNVVIFDMGLNLSKVLIHDNVETERMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L P+ A+PF I L++ + Sbjct: 57 DMGAIPDDRVMSDIEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 E+ + + AG + +G +E V V HSI + + V+ +P G +V+ D ++ Sbjct: 117 GEEKFGVQNDLVKMDAGGTMPIGEKCELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRM 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KNAK 225 D + +LGD D D IG EG+L + D TNA ++G SE + + D+M ++ Sbjct: 177 DHNPVLGDPIDMDRFREIGREGVLCYIEDCTNAGKKGKTPSESVARSQLKDVMYSLEDYD 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G ++ TTFSS ++R++S+++ AE IGR+ VLLG S+++ A + + Sbjct: 237 GGIVATTFSSHIARVKSLVEFAEDIGRQPVLLGRSMEKYSGTAERLDFVDFPSDLGMYGH 296 Query: 286 FGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 R E + + TG QGEPR+ L +++RGE +L E D VIFS+R Sbjct: 297 RKSVDRTFKRIMDEGKEDYLPVVTGHQGEPRAMLTRMARGETPY-ELDEGDKVIFSARVI 355 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P NE + L QG R+ +HVSGH +M Q + P ++ H Sbjct: 356 PEPTNEGQRYQAEKLLGMQGARIYD-----DIHVSGHLNSEGHYQMLQALNPTNVIPAHQ 410 Query: 394 EPLHLVAHKELALQEGIA 411 + + ELA EG Sbjct: 411 DMKGFSPYVELASNEGYE 428 >gi|300711101|ref|YP_003736915.1| predicted hydrolase [Halalkalicoccus jeotgali B3] gi|299124784|gb|ADJ15123.1| predicted hydrolase [Halalkalicoccus jeotgali B3] Length = 448 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 122/441 (27%), Positives = 198/441 (44%), Gaps = 44/441 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVIFDMGLNLSKVLIHDNVQTEKMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GAL L P+ A+PF I L++ + Sbjct: 57 DMGAIPDDRVMSDIEGDVQAIVPTHGHLDHIGALSKLAHRYDAPIVATPFTIELVKQEIN 116 Query: 111 YER---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 E V + + ++ G +E V V HSI + + V+ +P G IV+ D + Sbjct: 117 DENKFVVENDLQKMEGGETMEIGNG-LELEFVHVTHSIIDAINPVLHTPEGAIVYGLDKR 175 Query: 168 LDDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIM---K 222 +D ++ D D IG EG+LA + D TNA ++G SE ++++ D+M + Sbjct: 176 MDHTPVIEDPIDMKRFREIGREGEGVLAYIEDCTNANKKGRTPSESVARRHLQDVMTSIE 235 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 + G ++ TTFSS +SR+ S+++ A+ IGR +LLG S+++ A +G + Sbjct: 236 DYDGGIVATTFSSHISRVSSLVEFAQDIGRTPLLLGRSMEKYSGTAERLGFVDFPDEVGM 295 Query: 283 DESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 R E + I TG QGEPR+ L ++ RGE +L + D VIFS+ Sbjct: 296 FGHRKSVDRTFKRIMNEGKENFLPIVTGHQGEPRAMLTRMGRGETPY-QLDDGDKVIFSA 354 Query: 333 R--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 R P NE +N L QG R+ E +HVSGH M ++P+ ++ Sbjct: 355 RVIPEPTNEGQRYQSENLLRMQGARIYDE-----IHVSGHLCQEGHYTMLDALQPKHVIP 409 Query: 391 IHGEPLHLVAHKELALQEGIA 411 H + +L +G Sbjct: 410 AHQNMKGYSGYVDLCQNQGYE 430 >gi|322369460|ref|ZP_08044025.1| putative hydrolase [Haladaptatus paucihalophilus DX253] gi|320551192|gb|EFW92841.1| putative hydrolase [Haladaptatus paucihalophilus DX253] Length = 448 Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 202/440 (45%), Gaps = 42/440 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + L +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVIFDMGLNLSKVLLHDNVETEKLHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L + P+ ASPF I L++ + Sbjct: 57 DMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYNAPIVASPFTIELVKQQIQ 116 Query: 111 -YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 E+ + I +AG+ + + +E V V HSI + + V+ +P G IV+ D ++ Sbjct: 117 GEEKFGVENDLIKMEAGETMQLSDDVELEFVNVTHSIIDAINPVVHTPEGAIVYGLDKRM 176 Query: 169 DDDAILGDVTDKDSLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDI---MKN 223 D +LGD D IG E G+LA + D TNA R+G SE ++++ D+ +++ Sbjct: 177 DHTPVLGDPIDMKRFREIGREGNGVLAYIEDCTNAGRKGRTPSESVARRHLKDVLYSIED 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 G ++ TTFSS ++R++S+++ AE IGR VLLG S+++ A + + + Sbjct: 237 YDGGIVATTFSSHIARVKSLVEFAEDIGRTPVLLGRSMEKYSGTAERLNFVDFPEELGMF 296 Query: 284 ESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 R E + I TG QGEPR+ L ++ RGE +L D V+FS+R Sbjct: 297 GHRKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPY-QLDSGDKVVFSAR 355 Query: 334 --AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 P NE + L QG R+ VHVSGH +M ++PQ ++ Sbjct: 356 VIPEPTNEGQRYQSERLLKMQGARIYD-----DVHVSGHLREEGHYQMLDALQPQNVIPA 410 Query: 392 HGEPLHLVAHKELALQEGIA 411 H + +L +G Sbjct: 411 HQNMKGFAPYVDLCESQGYR 430 >gi|284165346|ref|YP_003403625.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015001|gb|ADB60952.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 449 Score = 226 bits (575), Expect = 1e-56, Method: Composition-based stats. Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 44/442 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----NDIVIFDMGLNLSKVLIHDNIRTEGMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L PV ASPF I L++ + Sbjct: 57 DMGAIPDDRIMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPVVASPFTIELVKGELA 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++ + AG+ + +G +E V V HSI + + V+ +P G +V+ D Sbjct: 117 DEQKFDSGNDLVKMDAGETMSIGDSGKVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDI---M 221 ++D ++GD D IG EG+L + D TNA ++G SE ++++ D+ M Sbjct: 177 RMDHTPVIGDPIDMKRFREIGREGEGVLCYIEDCTNANKKGRTQSENVAREHLRDVLYSM 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS ++R++S+++ A+ IGR+ VLLG S+++ A +G + Sbjct: 237 EDYDGGIVATTFSSHIARVKSLVEFAKDIGRQPVLLGRSMEQYSGTAERMGFAEFPDDLG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + + TG QGEPR+ L ++ RGE +L + D V+FS Sbjct: 297 MFGHRNSVDRTFERIMNEGKEDYLPVVTGHQGEPRAMLTRMGRGETPY-ELDDGDKVVFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + P NE + L QG R+ +HVSGH M ++P+ ++ Sbjct: 356 AGIIPEPTNEGQRYQAEKLLGMQGARIY-----SDIHVSGHLRQEGHYEMLDALQPKHVI 410 Query: 390 AIHGEPLHLVAHKELALQEGIA 411 H + +LA +G Sbjct: 411 PAHQNMKGFSGYVDLASNQGYK 432 >gi|124485507|ref|YP_001030123.1| hypothetical protein Mlab_0684 [Methanocorpusculum labreanum Z] gi|124363048|gb|ABN06856.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 447 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 40/437 (9%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---------SFPKDDLPGVDLV- 54 ++ + +GG E+G NM G ++ ++ D G+ + +++ +DL+ Sbjct: 3 DIEVIAVGGYNEVGRNMTAVRVG----KEIVIFDIGLYLDPITGNNNVDMENMHSLDLIQ 58 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV- 110 PD T + + AI TH H DH GA+ L + P+ ++P+ L++ + Sbjct: 59 MGAIPDDTVMNSVEGTVKAIVCTHGHLDHIGAIQKLAHRYNCPIISTPYTNELIKQQIEG 118 Query: 111 YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + S + +AG K + ++E VRV HSI +++ V+ +PVG +V+ D+K D Sbjct: 119 ERKFSVMNKTFALKAGGKYTISQNLTLEFVRVQHSIIDSVMAVLHTPVGCVVYANDFKFD 178 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 ++G+ D + IG EG+ L+ +S N G SE+ + + D + K Sbjct: 179 MTPVIGEAPDLARMREIGKEGVKVLIVESLNLDDRGYSPSEQVARLRVRDAIMRCEDDKN 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 ++V+TF+S ++RI++I + A +I R VLLG S++R + A + + Q + Sbjct: 239 AIIVSTFASQIARIKTITECAREIDRIPVLLGRSMERYNTTAEILKQVAFPQGTSIYGNR 298 Query: 287 G----------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 +++ +++ATG QGEP S L++++ GE +K+ D V+FS+ IP Sbjct: 299 KTTDRMLRRVLKEGKDKFLLVATGHQGEPGSMLSRIALGETP-LKIERGDKVMFSANIIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N + L+ QG R+ +HV+GH Y + + + P+ ++ HG Sbjct: 358 NPTNYAQRAEVDRLLMRQGARIFDG-----LHVTGHAYYQEHYDLLSMLNPEHIIPSHGP 412 Query: 395 PLHLVAHKELALQEGIA 411 + L + G Sbjct: 413 FAMKGGYVALGSEFGYT 429 >gi|23007155|ref|ZP_00049149.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Magnetospirillum magnetotacticum MS-1] Length = 293 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 147/298 (49%), Gaps = 10/298 (3%) Query: 261 LKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 + R +++A ++G + + + + + ++++++ TGSQGEP +AL++++ G+ + Sbjct: 1 MVRNMTIASELGYLHVPEGVLIDLKKVDSLRDDEIVLMCTGSQGEPMAALSRMANGDHK- 59 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 V++ DTVI +S IPGNE A+ I N L G RV+ VHVSGH +L Sbjct: 60 VQVGHGDTVILASSLIPGNENAVFRIINGLTRLGARVVHGG-NAKVHVSGHASAGELLYC 118 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVH 437 Y ++P+ ++ +HGE HLVA+ LA++ G+ V +G ++ L ++ V Sbjct: 119 YNVLKPKNVMPVHGEVRHLVANGALAVRTGVPADRVVLAEDGVVVDLVDGRASVVGAVPC 178 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVDIGIPAYDGD 496 G DG +G+ D + RR L G +SV ++D+ + P+I+ G + Sbjct: 179 GYVYVDGSSVGEITDAELKDRRILGEEGFVSVFAVVDSATGKVLAGPQILARGFA----E 234 Query: 497 GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 K+ + + V+ + D D L++ + + + ++P++ + + Sbjct: 235 DDKVFQDIQPEVVKALEDAIAGGATDTHQLQQVMRRVIGRWVSNRLRRRPMIVPVVVE 292 >gi|313125956|ref|YP_004036226.1| hydrolase of the metallo-beta-lactamase superfamily [Halogeometricum borinquense DSM 11551] gi|312292321|gb|ADQ66781.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Halogeometricum borinquense DSM 11551] Length = 450 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 125/455 (27%), Positives = 203/455 (44%), Gaps = 44/455 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVVFDMGLNLSQVLIHDNVETEKMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L P+ ASPF I L++ + Sbjct: 57 DMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVASPFTIELVKQQVE 116 Query: 111 -YERVSKKIPCISFQAGDKVDV---GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + + +AG+ + + G +E V V HSI + + V+ +P G IV+ D Sbjct: 117 GENKFNVGNDLVKMEAGEMMSIGDSGNVELEFVHVTHSIIDAINPVLHTPEGAIVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDIM--- 221 ++D +L D D IG E G+LA + D TNA R+G SE +K++ D++ Sbjct: 177 RMDHSPVLEDPIDMKRFREIGREGNGVLAYIEDCTNAGRKGRTPSESVARKHLEDVIRSV 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS VSR+ SI++ A+ IGR+ VLLG S+++ A +G + Sbjct: 237 EDYDGGIVATTFSSHVSRVSSIVEFAKDIGRQPVLLGRSMEKYSGTAERLGFVDFPDDVG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + I TG QGEPR+ L ++ RGE ++ D VIFS Sbjct: 297 MYGHRKSVDRTFKRIMKEGKENFLPIVTGHQGEPRAMLTRMGRGETPY-EIENGDKVIFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 +R P NE + L QG R+ +HVSGH +M ++PQ ++ Sbjct: 356 ARVIPEPTNEGQRYQSERLLKMQGARIYD-----DIHVSGHLREEGHYQMLDALQPQHVI 410 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H + +L +G + + + Sbjct: 411 PAHQNLKGFSPYVDLCESQGYDMGRDLHVTRNGNM 445 >gi|292656842|ref|YP_003536739.1| putative hydrolase [Haloferax volcanii DS2] gi|291370676|gb|ADE02903.1| predicted hydrolase [Haloferax volcanii DS2] Length = 450 Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats. Identities = 126/455 (27%), Positives = 207/455 (45%), Gaps = 44/455 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDVVVFDMGLNLSQVLIHDNVETEKMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L PV A+PF I L++ + Sbjct: 57 DMGAIPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVATPFTIELVKQQIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDV---GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + + +AG+ + + G +E V V HSI + + V+ +P G +V+ D Sbjct: 117 GENKFNVNNDLVKMEAGETMSIGDSGNVELEFVHVTHSIIDAINPVVHTPEGAVVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDIM--- 221 ++D +L D D IG E G+LA + D TNA R+G SE ++++ D+M Sbjct: 177 RMDHSPVLEDPIDMKRFREIGREGNGVLAYIEDCTNAGRKGRTPSESVARRHLKDVMTSV 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS +SR+ S+++ A+ IGR+ VLLG S+++ A +G + Sbjct: 237 EDYDGGIVATTFSSHISRVSSLVEFAKDIGRQPVLLGRSMEKYSGTAERLGFVDLPDDLG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + I TG QGEPR+ L ++ RGE ++ + D VIFS Sbjct: 297 MYGHRKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPY-EIDDGDKVIFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 +R P NE + L QG R+ E +HVSGH M Q ++PQ ++ Sbjct: 356 ARVIPEPTNEGQRYQSERLLRMQGARIYDE-----IHVSGHLREEGHYEMLQALQPQHVI 410 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H + +LA +G A + + + Sbjct: 411 PAHQNLKGFAPYVDLAESQGYALGRDLHVTRNGNM 445 >gi|303243471|ref|ZP_07329813.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] gi|302486032|gb|EFL48954.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] Length = 475 Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats. Identities = 115/437 (26%), Positives = 212/437 (48%), Gaps = 40/437 (9%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDD----LPGVDLV- 54 +L + +GG E+G NM + I+ D G V +D + ++L+ Sbjct: 29 QLEVVAIGGYEEVGRNMTAV----NVDGEIIIFDMGLRLDRVMIHEDSDVSKMHSLNLIE 84 Query: 55 ---FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KRV 110 PD T + + AI ++H H DH GA+ L + P+ +P+ + L++ Sbjct: 85 MGVIPDDTVMKNIEGEVKAIVVSHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREILS 144 Query: 111 YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + P I+ A + +D+ S+E +++ HSIP+ + V+ +P G IV+ D+K D Sbjct: 145 EKKFDVRNPLITLNAKETMDLTPNLSLEFIKITHSIPDAVLPVLHTPYGAIVYGNDFKFD 204 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKG 226 + I+G+ D ++ +G +G++ ++ +ST EG SE + + N Sbjct: 205 NIPIVGEKPDYRAIKKVGKKGVICMISESTRVNFEGKTPSEGVAASLLKNDLLGTDNENN 264 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 V++TTFSS ++RI+SI +IAE++GR VL+G S+ + +A D+G+++ + Sbjct: 265 GVVITTFSSHIARIKSITEIAERMGRIPVLIGRSMAKYCGIAEDIGLVEFPKNTKMAGDP 324 Query: 287 GLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R E+ +++ TG QGE + L++++ + + D V+FS+ IP Sbjct: 325 TSVDRIFHQVMKEGKEKYMLVVTGHQGEEGAVLSRMATNKTP-FRFERHDQVVFSADVIP 383 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++ RL GVR+ HVSGH D + M +W+ P+ ++ HG+ Sbjct: 384 NPMNAAQRYMLEARLKLAGVRLF-----KGAHVSGHAAKEDHRDMIRWLNPEHIIPAHGD 438 Query: 395 PLHLVAHKELALQEGIA 411 + +LA +EG Sbjct: 439 FNLTATYAKLAEEEGYR 455 >gi|257388647|ref|YP_003178420.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257170954|gb|ACV48713.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 448 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 205/440 (46%), Gaps = 42/440 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEVEIATIGGYEEVGRQMTAVRAG----DDIVIFDMGLNLSKVLIHDNVETERMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + + ++ AI TH H DH GA+ L PV A+P+ I L++ + Sbjct: 57 DMGAIPDDRVMSELEGDVKAIVPTHGHLDHIGAISKLAHRYDAPVVATPYTIELVKQEIK 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 E+ + + +AG + +G +E V V HS+ + + V+ +P G++V+ D ++ Sbjct: 117 GEEKFGVQNDLVKMEAGGTMSIGDKNELEFVNVTHSVIDAINPVLHTPEGSVVYGLDKRM 176 Query: 169 DDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIM---KN 223 D +LGD D IG EG+L + D TNA R+G SE ++++ D+M ++ Sbjct: 177 DHTPVLGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRHLKDVMTSIED 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 G ++ TTFSS ++R++S+++ A++IGR+ VLLG S+++ A + + Sbjct: 237 YDGGIVATTFSSHIARVKSLVEFADEIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLGMY 296 Query: 284 ESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 R E + I TG QGEPR+ L ++ RGE +L + D V+FS+R Sbjct: 297 GHRKSVDRTFKRIMNDGKENFLPIVTGHQGEPRAMLTRMGRGETPY-ELEDGDKVLFSAR 355 Query: 334 --AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 P NE + L QG R+ +HVSGH +M Q ++PQ ++ Sbjct: 356 VIPEPSNEGQRYQSEQLLKMQGARLYD-----DIHVSGHLREEGHYQMLQALQPQNVIPG 410 Query: 392 HGEPLHLVAHKELALQEGIA 411 H + LA +G Sbjct: 411 HQSMSGFAPYVSLAESQGYK 430 >gi|16554486|ref|NP_444210.1| metallo-beta-lactamase superfamily hydrolase [Halobacterium sp. NRC-1] gi|169235956|ref|YP_001689156.1| hypothetical protein OE2648F [Halobacterium salinarum R1] gi|167727022|emb|CAP13808.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 448 Score = 223 bits (567), Expect = 9e-56, Method: Composition-based stats. Identities = 117/440 (26%), Positives = 203/440 (46%), Gaps = 42/440 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRAG----DDIVIFDMGLNLSKVLVHDNVETEKMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GA+ L P+ SPF I L++ + Sbjct: 57 DMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVGSPFTIELVKGEIE 116 Query: 111 -YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ + + +AG +++G +E V V HSI + + V+ +P G +V+ D ++ Sbjct: 117 SEQKFGVENDLVKMEAGGTMEIGDRCELEFVHVTHSIIDAINPVLHTPEGAVVYGLDKRM 176 Query: 169 DDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKN 223 D D +L D D + IG EG+L + D TNA ++G SE ++++ D+ + + Sbjct: 177 DHDPVLEDPIDMERFREIGREGEGVLCYIEDCTNAGKKGRTPSESTARRHLKDVLTSVAD 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 G ++ TTFSS +SR+ S+++ A++IGR+ +LLG S++R A +G + Sbjct: 237 YDGGIVATTFSSHISRVSSLVEFAKEIGREPILLGRSMERYSGTAERMGRVNFPDDLGMF 296 Query: 284 ESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 R E + I TG QGEP++ L ++ RGE + + D +IFS+ Sbjct: 297 GHRKSVDRAFKRVMNEGKENFLPIVTGHQGEPQAMLTRMGRGETPY-DIEDGDKIIFSAS 355 Query: 334 --AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 P N+ + L QG R+ +HVSGH +M ++PQ L+ Sbjct: 356 VIPEPTNKGQRYQSEQLLRMQGARIYD-----DIHVSGHLREEGHYQMLDALQPQHLIPA 410 Query: 392 HGEPLHLVAHKELALQEGIA 411 H + + + +LA +G Sbjct: 411 HQDMKGMAPYAKLAKSQGYK 430 >gi|15678078|ref|NP_275192.1| hypothetical protein MTH49 [Methanothermobacter thermautotrophicus str. Delta H] gi|2621085|gb|AAB84556.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 450 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 123/437 (28%), Positives = 202/437 (46%), Gaps = 41/437 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDD----LPGVDLV-- 54 + + +GG E+G NM+ G ++ D G V +D + +DL+ Sbjct: 3 VEVIAIGGYEEVGKNMSAVKVG----DDVVIFDMGIHLDRVHIHEDTDIARMHSLDLIER 58 Query: 55 --FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 PD T + + AI TH H DH GA+ L P+ A+P+ I L+E E Sbjct: 59 GVIPDDTLMKDVDGKVRAIVFTHGHLDHIGAVAKLAHRYQAPIIATPYTIALIERTIKAE 118 Query: 113 RVSK--KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 R + ++E ++ HSIP+++ + +P G IV+ D+K DD Sbjct: 119 RKFNVLNTLQVLNAGEKCQISPGITLEFIQSTHSIPQSVIAALHTPEGIIVYALDFKFDD 178 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN---AK 225 + D L +G +G+LA++ ++T A +E SEK + + DIMKN K Sbjct: 179 HQKISPPPDYHRLRELGRKGVLAMIVETTRANEKQEVKTHSEKVARIVLEDIMKNPLEEK 238 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTFSS + RI++I DIA + R+++LLG S++R +A +GI+K + S Sbjct: 239 TGMIVTTFSSHMERIQAISDIASKSDRQMLLLGRSMERYCGLAEAMGILKLPENASIYGS 298 Query: 286 FGLY---------PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 RE ++I TG QGEP + L +++ + ++ D V+ S+ IP Sbjct: 299 PKAVNRALARAEAKREDYLLITTGHQGEPDALLPRIANAK-TQFRIQRGDNVVISAPVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++ RL G R+ HVSGH D + + + P ++ HG+ Sbjct: 358 NPMNVANRNLMERRLASSGARIYTNA-----HVSGHAGREDHRDFIRMLNPMHIIPAHGD 412 Query: 395 PLHLVAHKELALQEGIA 411 L A+ E+A +EG Sbjct: 413 LSMLSAYAEIAEEEGYK 429 >gi|222480458|ref|YP_002566695.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453360|gb|ACM57625.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 450 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 119/442 (26%), Positives = 196/442 (44%), Gaps = 44/442 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ LGG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATLGGYEEVGRQMTAVRAG----EDIVIFDMGLNLSKVLIHDNVETESMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + + ++ AI TH H DH + L P+ SP+ I L++ + Sbjct: 57 DMGAIPDDRVMSELEGDVQAIVPTHGHLDHIAGIPKLAHRYDAPIVGSPYTIELVKQQIA 116 Query: 111 YERVSK-KIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E + + +AG + +G +E V V HSI + + V+ +P G +V+ D Sbjct: 117 DEGKFQVDNDLVKMKAGGTMAIGDSEQVEMEFVNVTHSIIDAINPVLHTPEGAVVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIG--NEGILALMCDSTNAMREGTCISEKGIKKNIYDI---M 221 +LD ++GD D D IG +EG+L + D TNA R+G SE KK++ D M Sbjct: 177 RLDHTPVIGDPIDMDRFREIGRQDEGVLCYIEDCTNAGRKGRTPSESYAKKHVEDTLTSM 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS ++R++++++ A +IGR+ VLLG S+++ A + + Sbjct: 237 EDYSGGIVATTFSSHIARVKTLVEYAREIGRQPVLLGRSMEKYSGTAERLDFVDFQGDVG 296 Query: 282 SDESFGLYPREQLIV----------IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R + I TG QGEPR+ L ++ RGE ++ D V+FS Sbjct: 297 MYGHRKSVDRAFKRIMKEGKGNFLPIVTGHQGEPRAMLTRMGRGETPY-EIENGDKVVFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + P NE + L QG R+ +HVSGH M ++PQ L+ Sbjct: 356 ASIIPEPTNEGQRYQSEQLLRMQGARLYD-----DIHVSGHLREEGHYEMLDALQPQHLI 410 Query: 390 AIHGEPLHLVAHKELALQEGIA 411 H + +LA +G Sbjct: 411 PAHQTLKGRSPYVDLATSQGYK 432 >gi|110668787|ref|YP_658598.1| hydrolase [Haloquadratum walsbyi DSM 16790] gi|109626534|emb|CAJ52997.1| predicted hydrolase [Haloquadratum walsbyi DSM 16790] Length = 450 Score = 222 bits (565), Expect = 2e-55, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 194/441 (43%), Gaps = 44/441 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDLV 54 E+ +GG E+G M G ++ D G++ + + +DL+ Sbjct: 1 MEIEIATIGGYEEVGRQMTAVRTG----DDIVIFDMGLNLSQVLIHDNVETETMHSLDLI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD + ++ AI TH H DH GAL L P+ SPF I L++ + Sbjct: 57 DMGAIPDDRIMSDLEGDVQAIVPTHGHLDHIGALSKLAHRYDAPIVGSPFTIELVKQQID 116 Query: 111 YERVSKKIP----CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 E + +A + G +E V V HSI + + VI +P G IV+ D Sbjct: 117 SENKFNVNNDLLKMSAGEAMSIGESGNVELEFVHVTHSIIDAINPVIHTPEGAIVYGLDK 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNE--GILALMCDSTNAMREGTCISEKGIKKNIYDI---M 221 ++D +L D D IG E G+L + D TNA R+G SE + ++ D + Sbjct: 177 RIDHSPVLEDPIDMKRFREIGREDNGVLCYIEDCTNAGRKGRTPSESHARSHLEDTIRSI 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 ++ G ++ TTFSS VSR+ S+++ A+ I R+ VLLG S+++ A +G + Sbjct: 237 EDYDGGIVATTFSSHVSRVSSLVEFAKDIDRQPVLLGRSMEKYSGAAERLGFVDLPDDVG 296 Query: 282 SDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 R E + I TG QGEPR+ L ++ RGE +L D VIFS Sbjct: 297 MYGHRKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETP-FELENGDKVIFS 355 Query: 332 SR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 +R P NE + L QG R+ E +HVSGH +M ++PQ ++ Sbjct: 356 ARVIPEPTNEGQRYQSERLLKMQGARIYDE-----IHVSGHLREEGHYQMLDALQPQHII 410 Query: 390 AIHGEPLHLVAHKELALQEGI 410 H L + +LA +G Sbjct: 411 PAHQNLEGLSPYVDLAESQGY 431 >gi|325958578|ref|YP_004290044.1| beta-lactamase domain-containing protein [Methanobacterium sp. AL-21] gi|325330010|gb|ADZ09072.1| beta-lactamase domain protein [Methanobacterium sp. AL-21] Length = 449 Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats. Identities = 118/437 (27%), Positives = 201/437 (45%), Gaps = 41/437 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS-----FPKDD----LPGVDLV-- 54 + + +GG E+G NM+ G I+ D G+ +D + +DL+ Sbjct: 3 VEVIAIGGYEEVGKNMSAVKVG----EDVIIFDMGIHLDRIHIHEDTDIARMHSLDLIER 58 Query: 55 --FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 PD T + + AI +H H DH GA+ L P+ A+P+ + L+E E Sbjct: 59 GIIPDDTLMKDVDGKVRAIVFSHGHLDHIGAVAKLAHRYEAPLIATPYTMALIEKTIKGE 118 Query: 113 RVSKKIPC-ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 R K +G+K+ + ++E VR HSIP+T+ + + G IV++ D+K D+ Sbjct: 119 RKFKVTNPLKVLNSGEKMQISPDITLEFVRTTHSIPQTVTPALHTSEGIIVYSNDFKFDN 178 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-----IKKNIYDIMKNAK 225 L D +G +G+LA + D+T A + + + ++I + Sbjct: 179 HQTLSPPPDYQRFRELGRKGVLAAIIDTTRAAEDDQLKTHSEKVARLVLRDIMEEPLKED 238 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 +++TTFSS + RI++I +IA + RKI+LLG S++R ++A ++GI+K + S Sbjct: 239 SGMIITTFSSHIERIQAITNIASESKRKILLLGRSMERFCTMAENMGILKLPKSASIYGS 298 Query: 286 FG---------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 R +++ TG QGEP + L +++ G+ + D V+ S+ IP Sbjct: 299 PKAVNRALARADENRSDYVLVTTGHQGEPDALLPRIANGK-TMFNVKPGDNVVISASVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++ RL G R+ HVSGH D + + + P+ L+ HG Sbjct: 358 NPMNIANRNLMERRLKSSGARIFTNA-----HVSGHAGKEDHRDFIRMLDPKHLIPSHGN 412 Query: 395 PLHLVAHKELALQEGIA 411 L A+ ELA +EG Sbjct: 413 LNMLAAYTELAEEEGYK 429 >gi|304314299|ref|YP_003849446.1| hydrolase [Methanothermobacter marburgensis str. Marburg] gi|302587758|gb|ADL58133.1| predicted hydrolase [Methanothermobacter marburgensis str. Marburg] Length = 450 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 123/437 (28%), Positives = 202/437 (46%), Gaps = 41/437 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDD----LPGVDLV-- 54 + + +GG E+G NM+ G ++ D G V +D + +DL+ Sbjct: 3 VEVIAIGGYEEVGKNMSAVKVG----DDVVIFDMGIHLDRVHIHEDTDIARMHSLDLIER 58 Query: 55 --FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 PD T + + AI TH H DH GA+ L P+ A+P+ I L+E E Sbjct: 59 GVIPDDTLMKDVDGKVRAIVFTHGHLDHIGAVAKLAHRYQAPIIATPYTIALIERTIKAE 118 Query: 113 RVSK--KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 R + ++E ++ HSIP+++ + +P G IV+ D+K DD Sbjct: 119 RKFNVLNTLQVLNAGEKCQISPGITLEFIQSTHSIPQSVIAALHTPEGIIVYALDFKFDD 178 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN---AK 225 + D L +G +G+LA++ ++T A +E SEK + + DIMKN + Sbjct: 179 HQKISPPPDYHRLRELGRKGVLAMIVETTRANEKQEVKTHSEKVARIVLEDIMKNPLEER 238 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++VTTFSS + RI++I DIA Q R+++LLG S++R +A +GI+K + S Sbjct: 239 NGMIVTTFSSHMERIQAISDIASQSDRQMLLLGRSMERYCGLAEAMGILKLPENASIYGS 298 Query: 286 FGLY---------PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 RE ++I TG QGEP + L +++ + ++ D V+ S+ IP Sbjct: 299 PKAVNRALARAEAKREDYLLITTGHQGEPDALLPRIANAK-TQFRIKRGDNVVISAPVIP 357 Query: 337 G--NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++ RL G R+ HVSGH D + + + P ++ HG+ Sbjct: 358 NPMNVANRNLMERRLASSGARIYTNA-----HVSGHAGREDHRDFIRMLNPMHIIPAHGD 412 Query: 395 PLHLVAHKELALQEGIA 411 L A+ E+A +EG Sbjct: 413 LSMLSAYAEIAEEEGYK 429 >gi|55377015|ref|YP_134865.1| hydrolase [Haloarcula marismortui ATCC 43049] gi|55229740|gb|AAV45159.1| predicted hydrolase [Haloarcula marismortui ATCC 43049] Length = 460 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 117/456 (25%), Positives = 203/456 (44%), Gaps = 42/456 (9%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---------FPKDDLPGVDL 53 E+ +GG +G M G ++ D G++ + + +DL Sbjct: 12 TMEVEIATIGGYEAVGRQMTAVRAG----DDVVIFDMGLNLSKVLIHDNVETERMHSLDL 67 Query: 54 V----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 + PD + ++ AI TH H DH GA+ L P+ A+PF I L++ + Sbjct: 68 IDMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQI 127 Query: 110 V-YERVSKKIPCISFQAGDKVDVGAF-SIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 E+ + + AG+ + +G +E V V HSI + + V+ +P G++V+ D + Sbjct: 128 KSEEKFGVQNDLVKMDAGETMSIGERNELEFVNVTHSIIDAINPVLHTPEGSVVYGLDKR 187 Query: 168 LDDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIM---K 222 +D ++GD D IG EG+L + D TNA ++G SE ++++ D+M Sbjct: 188 MDHSPVIGDPIDMKRFREIGREGEGVLCYIEDCTNAGKKGRTPSESVARRHLKDVMDSVA 247 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 + G ++ TTFSS ++R++S+++ A+ IGR+ VLLG S+++ A + + + Sbjct: 248 DYDGGIVATTFSSHIARVKSLVEFADDIGRQPVLLGRSMEKYSGTAERLDFVDFPEDLGM 307 Query: 283 DESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 R E + I TG QGEPR+ L ++ RGE +L + D V+FS+ Sbjct: 308 YGHRKSVDRTFKRIMNEGKENFLPIVTGHQGEPRAMLTRMGRGETPY-ELDDGDKVLFSA 366 Query: 333 R--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 R P NE + L QG R+ +HVSGH M ++P+ ++ Sbjct: 367 RVIPEPTNEGQRYQSEKLLGMQGARIYD-----DIHVSGHLREEGHYEMIDALQPKNIIP 421 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 H + +LA G + + + Sbjct: 422 AHQSLEGFAPYVDLAENMGYKAGRDLHITRNGNMIK 457 >gi|205373587|ref|ZP_03226390.1| hypothetical protein Bcoam_10045 [Bacillus coahuilensis m4-4] Length = 290 Score = 219 bits (559), Expect = 8e-55, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 7/293 (2%) Query: 267 VAIDVGIIKKDQLFLSD-ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 +A+ +G ++ D+ + +++++ATG+QGEP AL +++ G + + + E Sbjct: 1 MALKLGYLEVDETSIIPVSEAKELHPSEVVILATGNQGEPLEALQKMASGTHKLISIEEG 60 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 DTV + P E+ + + + G V+ VHVSGH DLK M I+P Sbjct: 61 DTVFIAVAPSPSIELMLFKTVDAVARAGANVLTSS--KKVHVSGHGSQEDLKMMINLIKP 118 Query: 386 QVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKD 443 + V I GE L +H LA GI + + G +L + +++ V G L D Sbjct: 119 KYFVPIQGEFRMLKSHATLASSLGIEHNHIFLLEKGDVLEYSDERMKVNGRVPTGNVLID 178 Query: 444 GFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGDGGKIHK 502 G +G ++ + RR LS G L V + L I PEI+ G Y + K+ Sbjct: 179 GLGVGDIGNIVLRDRRLLSQDGILIVVITLTKQNRMIVSGPEIISRGF-VYVRESEKLMA 237 Query: 503 LLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 V V Q + + +++ + L L ++P++ I ++ Sbjct: 238 ESADLVREIVNQNLQQQSVEWATIKQDVRDKLNYFLYNKTKRRPMILPIIMEV 290 >gi|321311055|ref|YP_004193384.1| hypothetical protein HF1_15370 [Mycoplasma haemofelis str. Langford 1] gi|319802899|emb|CBY93545.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford 1] Length = 550 Score = 216 bits (550), Expect = 8e-54, Method: Composition-based stats. Identities = 86/561 (15%), Positives = 197/561 (35%), Gaps = 26/561 (4%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ + LGG E G Y + +++ G+ + G+ + PD+ ++ + Sbjct: 3 KINYFALGGQDESGR----YSGVLEINNDIFILNTGIGAEFSNQLGIKKIIPDLRYLSEH 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLE---AKRVYERVSKKIPC 120 + + AIFI + GAL VPVY S +++ K ER Sbjct: 59 KSRVKAIFIGCPKNLNIGALPYFLEAFKGVPVYTSQGGKLIIDSFLNKFQEERGVDLGAN 118 Query: 121 IS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVT 178 + + + +G+ I VR S+P + + + +V ++ + ++ + Sbjct: 119 VVAINPSNDITIGSLKICGVRTASSVPNSYGWLFKLVTGQVVVFLDEFLIANENKPCCES 178 Query: 179 DKDSLCAIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + L+ + A + G + + + K +L + Sbjct: 179 QLHIIAQQAKNKTTLLLLGAQAAGKMLGFSYPNAKNFSFLKRTVASTKNRILAGVYEDDW 238 Query: 238 SRIRSIIDIAEQIGRKIVL-LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + ++ +A+ + + A+ ++ + S L + +++ Sbjct: 239 NTLFNLSRVAKIYHMNFHISCPR------TSALFNKHVENLKGDEYAISNPLVNSDNVLI 292 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + TG L + G+ +K D +I ++ +P NE + N + +Q + + Sbjct: 293 VITGDSETLFKTLLDIHSGDH-EIKFKSGDLLIIATITLPENEFEEISLLNEISKQDIVL 351 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP-LHLVAHKELALQEGIACVPP 415 + + V D+K + + P +V I G + +K L + Sbjct: 352 VKQP---KSIVPYKAGNEDIKFIVNSLSPYNIVPIDGYYKDFINVYKALENTIDPNRIKF 408 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN 475 + +G+ + + I ++ + I + +R+ L G + V+VL Sbjct: 409 LSSGEKIEIDDKNINVVS-LPIAKQYVSEEGILDINSSTVLERQLLEKNGVVMVSVLYHT 467 Query: 476 HYNIFGVPEIVDIGIPAYDGD-GGKIHKLLLKTVITTVVDLPQFRRK-DLKLLRESISSA 533 + F P + D +I + ++K + + +K ++ I A Sbjct: 468 KRHCFSRPHVEMKAFVTDDYSRKDEIQEAIVKFLDLELSKFLSLNVTLSIKDVKNHIKDA 527 Query: 534 LRSLLKKVWGKKPLVTVFINK 554 + +K KKPLV I + Sbjct: 528 VYKAVKNKTQKKPLVLPIITR 548 >gi|167757006|ref|ZP_02429133.1| hypothetical protein CLORAM_02555 [Clostridium ramosum DSM 1402] gi|167703181|gb|EDS17760.1| hypothetical protein CLORAM_02555 [Clostridium ramosum DSM 1402] Length = 249 Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 8/234 (3%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK + + LPLGG E+G +M + ++D G FP+ GVD++ P + Sbjct: 5 MKKDVVKILPLGGQAEMGKSMYCIEI----KEQIFILDAGFRFPEVSKLGVDIIIPSFDY 60 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + ++ ++AI ITH H+D AL L ++ PVYA L+E + Sbjct: 61 LKENKERVVAIIITHGHDDVMAALPYLLEAVNAPVYAPALTADLIEQMIKRHKKHNNFRV 120 Query: 121 ----ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + D + + +E V HSIP ++ + + + G IV++G++ +D A G Sbjct: 121 SYQLNRVKRNDSIIIAGIPVEFFPVTHSIPGSVGVALWTDNGYIVYSGEFIVDFGAPEGF 180 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 D + IG +G+LAL+C+S+ + G + + I +I+K K L Sbjct: 181 RCDIQKMMEIGKKGVLALLCESSYSKNPGYTSPKHKLTDKIDNILKIVKDESLF 234 >gi|312137121|ref|YP_004004458.1| RNA-metabolising metallo-beta-lactamase [Methanothermus fervidus DSM 2088] gi|311224840|gb|ADP77696.1| RNA-metabolising metallo-beta-lactamase [Methanothermus fervidus DSM 2088] Length = 450 Score = 214 bits (544), Expect = 4e-53, Method: Composition-based stats. Identities = 114/440 (25%), Positives = 203/440 (46%), Gaps = 42/440 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDD----LPGVDLV 54 ++ + +GG E+G NM G + ++ D G V +D + ++L+ Sbjct: 1 MDVEIISIGGYEEVGKNMTAVKVG----KDIVIFDMGIHLDRVHIHEDTNLARMHSLELI 56 Query: 55 ----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 PD T + N+ AI TH H DH GA+ L + P+ ++P+ +GL+E Sbjct: 57 NRGVIPDDTIMRNVDGNVRAIVFTHGHLDHIGAVTKLAEKYNAPIISTPYTLGLIERMLK 116 Query: 111 YERVSK--KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 E+ K + +E + V HSIP ++ V+ +PVG IV+ D+K Sbjct: 117 SEKKFNVLKRLQVLKGGEKCQISSNIILEFIHVTHSIPHSVIAVLHTPVGAIVYALDFKF 176 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-----IKKNIYDIMKN 223 D+ I+ L +G E + AL+ +ST + + ++I + + Sbjct: 177 DNHQIISPPPQYSRLRKLGKENVFALIVESTRVGEVCEVKTHSERIARFVLEDIMKNLLD 236 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI-GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 K +++TTFSS + RI++I DI E+ R +++LG S++R S+A ++ ++K + Sbjct: 237 EKVGIIITTFSSHIERIQAIADIVEENSNRHMLILGRSMERYCSIAENMELLKLPENASI 296 Query: 283 DESFGLY---------PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + +E ++I TG QGEP + L +++ + K+ + D +I S+ Sbjct: 297 YGNPKAVSQALARATANKEDYVLITTGHQGEPDALLPRIANSKTPY-KIQKTDNIIISAP 355 Query: 334 AI--PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 I P N ++ RL +G R+ VHVSGH D + + + + P ++ Sbjct: 356 VIPHPVNTANRYLMEKRLQARGARIFT-----DVHVSGHAGREDHRDLIRMLNPMHIIPA 410 Query: 392 HGEPLHLVAHKELALQEGIA 411 HG+ L A+ ELA +EG Sbjct: 411 HGDLQMLSAYAELAEEEGYN 430 >gi|255024165|ref|ZP_05296151.1| hypothetical protein LmonocyFSL_13333 [Listeria monocytogenes FSL J1-208] Length = 300 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 7/303 (2%) Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIA 298 ++ ++D + RK+ ++G L+RV +A +G I ++ L + + Y +++ +I Sbjct: 1 LQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIE 60 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 TG+ GEP +L +++G + DTV ++ P E + + L + G +V+ Sbjct: 61 TGNLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLT 120 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPV 416 + +SGH DLK M ++P+ V +HGE L++H +LA + G+A V V Sbjct: 121 --MSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIV 178 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 G++L D + + V G L DG +G ++ + R+ LS G V V L+ Sbjct: 179 GKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRK 238 Query: 477 YN-IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 I PEI+ G Y + + + K V V Q + L++ I L Sbjct: 239 SKTITSGPEIISRGF-IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLN 297 Query: 536 SLL 538 L Sbjct: 298 RYL 300 >gi|284931093|gb|ADC31031.1| putative hydrolase [Mycoplasma gallisepticum str. F] Length = 593 Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats. Identities = 97/592 (16%), Positives = 205/592 (34%), Gaps = 61/592 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N ++ + + + G P + L GV+ + PD ++I+ Sbjct: 20 KINFFTLGGQDEQGKNCSVLE----VNDDIYLFNAGSLVPINSLLGVEQLIPDYSYIVNH 75 Query: 65 RKNLMAIFITHAHEDHYGALH--------DLWSFLHVP----VYASPFAIGLLEAKRVYE 112 +K + +FI P VY S ++E+ + Sbjct: 76 KKKVKGLFI---------GYPSQSNLGSLLYLLKSLKPQTLTVYTSLIGKTIIESIMDKQ 126 Query: 113 R----VSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R K + + + + S+ RV SIP + + + G IV+ D+ Sbjct: 127 RDFEPYKKHVNIVVLNPLKEFKINDSVSVIPFRVFSSIPYSYGFCLSTQDGMIVYIDDFI 186 Query: 168 LDDDAILGDVTDKDSLCA-IGNEGILALMCDSTNAMREGTC-ISEKGIKKNIYDIMKNAK 225 L +D +D L I N+ +L L+ + + + K+ I + + K Sbjct: 187 LVNDKNKTFSSDLMDLRMLINNKKVLLLIVGAGQVGKHISNTSPNHRSKQAIEKFINDCK 246 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G ++ + +V + + IA + R ++ + + + I + L S Sbjct: 247 GRSIIACYDDNVYAMFTAATIARKQQRPFIVYSQASINLFNTIIKKNMFNSRDLQTMPIS 306 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 + I++ + + LA+++ GE + +KL +D I + I G E I Sbjct: 307 EMN-NVKDAIIVVANTPHNLYNQLAKIATGEDKRLKLDSEDRFILLTPKIAGFESYEAKI 365 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP----LHLVAH 401 + + VI + V + D K + +RPQ V I G +L Sbjct: 366 LDEIA--RCDVIYKRLNSEV-LPIKASNEDHKFLVNLLRPQYAVPIQGLYKEFVKYLEVV 422 Query: 402 KELALQEGIACVPPVRNGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQ 460 + + + NG++L + E+ D + + +++R Q Sbjct: 423 NQTGNFKEHQKPILLYNGEILSFVNGKLTNKHEELHLNSKCIDTAGVQDVKSMILSERFQ 482 Query: 461 LSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLK------------- 506 + G + + + +I G+ + K+++ + K Sbjct: 483 MGCNGVVVLAMYFSTKKMEFLDAIDIQTYGVS---DESVKLNEAIQKCKTQIKTMQITFI 539 Query: 507 -TVITTVVDLPQFRR--KDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + + R D +++I + + +K K V + ++ Sbjct: 540 TDIKDRIEKNMKKRITMNDYTQFKKTIRKLVGKIFEKSLFKNAAVITSVVEL 591 >gi|294660224|ref|NP_852865.2| putative hydrolase [Mycoplasma gallisepticum str. R(low)] gi|284811879|gb|AAP56433.2| putative hydrolase [Mycoplasma gallisepticum str. R(low)] gi|284930326|gb|ADC30265.1| putative hydrolase [Mycoplasma gallisepticum str. R(high)] Length = 593 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 98/592 (16%), Positives = 205/592 (34%), Gaps = 61/592 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LGG E G N ++ + + + G P + L GV+ + PD ++I+ Sbjct: 20 KINFFTLGGQDEQGKNCSVLE----VNDDIYLFNAGSLVPINSLLGVEQLIPDYSYIVNH 75 Query: 65 RKNLMAIFITHAHEDHYGALH--------DLWSFLHVP----VYASPFAIGLLEAKRVYE 112 +K + +FI P VY S ++E+ + Sbjct: 76 KKKVKGLFI---------GYPSQSNLGSLLYLLKSLKPQTLTVYTSLIGKTIIESIMDKQ 126 Query: 113 RV----SKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R K + + + + S+ RV SIP + + + G IV+ D+ Sbjct: 127 RNFEPYKKHVNIVVLNPLKEFKINDSVSVIPFRVFSSIPYSYGFCLSTQDGMIVYIDDFI 186 Query: 168 LDDDAILGDVTDKDSLCA-IGNEGILALMCDSTNAMREGTC-ISEKGIKKNIYDIMKNAK 225 L +D +D L I N+ +L L+ + + + K+ I M + K Sbjct: 187 LVNDKNKTFSSDLMDLRMLITNKKVLLLIVGAGQVGKHISNTSPNHRSKQAIEKFMNDCK 246 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G ++ + +V + + IA + R ++ + + + I + L S Sbjct: 247 GRSIIACYDDNVYAMFTAATIARKQQRPFIVYSQASINLFNTIIKKNMFNSRDLQTMPIS 306 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 + I++ + + LA+++ GE + +KL +D I + I G E I Sbjct: 307 EMN-NVKDAIIVVANTPHNLYNQLAKIATGEDKRLKLDSEDRFILLTPKIAGFESYEAKI 365 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP----LHLVAH 401 + + VI + V + D K + +RPQ V I G +L Sbjct: 366 LDEIA--RCDVIYKRLNSEV-LPIKASNEDHKFLVNLLRPQYAVPIQGLYKEFVKYLEVV 422 Query: 402 KELALQEGIACVPPVRNGKMLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAKRRQ 460 + + + NG++L + E+ D + + +++R Q Sbjct: 423 NQTGNFKEHQKPILLYNGEILSFVNGKLTNKHEELHLNSKCIDTAGVQDVKSMILSERFQ 482 Query: 461 LSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLK------------- 506 + G + + + +I G+ + K+++ + K Sbjct: 483 MGCNGVVVLAMYFSTKKMEFLDAIDIQTYGVS---DEAVKLNEAIQKCKTQIKTMQITFI 539 Query: 507 -TVITTVVDLPQFRR--KDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + + R D +++I + + +K K V + ++ Sbjct: 540 TDIKDRIEKNMKKRITMNDYTQFKKTIRKLVGKIFEKSLFKNAAVITSVVEL 591 >gi|255030606|ref|ZP_05302557.1| hypothetical protein LmonL_18593 [Listeria monocytogenes LO28] Length = 240 Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 5/242 (2%) Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 R +++ DTV+FSS IPGN ++ N L + G VI +H SGH + Sbjct: 1 HRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKVN-NIHTSGHGGQQEQ 59 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDE 434 K M + ++P+ + IHGE H E A + G+ + NG +L L + + + Sbjct: 60 KLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMANGDVLALTSETAHVAGK 119 Query: 435 VVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAY 493 + DG IG ++ + RR LS G + V V +D + + P+I+ G Y Sbjct: 120 IHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFI-Y 178 Query: 494 DGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFIN 553 + G + + + + + + ++ I+ L+ L + ++P++ I Sbjct: 179 MRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIM 238 Query: 554 KI 555 ++ Sbjct: 239 EV 240 >gi|255024259|ref|ZP_05296245.1| hypothetical protein LmonocyFSL_13989 [Listeria monocytogenes FSL J1-208] Length = 178 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 4/162 (2%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 PLGGV E G N+ + ++D G+ FP+++L G+D+V PD ++ + + + Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVK 68 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 AIF+TH HED GAL L + PVY + I L ++ R + + Sbjct: 69 AIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTL 128 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + R H+IP+++ +V+ + G+IV+TGD+K D Sbjct: 129 SFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQS 170 >gi|10580687|gb|AAG19531.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 399 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 108/387 (27%), Positives = 186/387 (48%), Gaps = 29/387 (7%) Query: 48 LPGVDLV----FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 + +DL+ PD + ++ AI TH H DH GA+ L P+ SPF I Sbjct: 1 MHSLDLIDMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVGSPFTIE 60 Query: 104 LLEAKRV-YERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIV 161 L++ + ++ + + +AG +++G +E V V HSI + + V+ +P G +V Sbjct: 61 LVKGEIESEQKFGVENDLVKMEAGGTMEIGDRCELEFVHVTHSIIDAINPVLHTPEGAVV 120 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + D ++D D +L D D + IG EG+L + D TNA ++G SE ++++ D Sbjct: 121 YGLDKRMDHDPVLEDPIDMERFREIGREGEGVLCYIEDCTNAGKKGRTPSESTARRHLKD 180 Query: 220 I---MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + + + G ++ TTFSS +SR+ S+++ A++IGR+ +LLG S++R A +G + Sbjct: 181 VLTSVADYDGGIVATTFSSHISRVSSLVEFAKEIGREPILLGRSMERYSGTAERMGRVNF 240 Query: 277 DQLFLSDESFGLYPR----------EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 R E + I TG QGEP++ L ++ RGE + + D Sbjct: 241 PDDLGMFGHRKSVDRAFKRVMNEGKENFLPIVTGHQGEPQAMLTRMGRGETPY-DIEDGD 299 Query: 327 TVIFSSR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 +IFS+ P N+ + L QG R+ +HVSGH +M ++ Sbjct: 300 KIIFSASVIPEPTNKGQRYQSEQLLRMQGARIYD-----DIHVSGHLREEGHYQMLDALQ 354 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGIA 411 PQ L+ H + + + +LA +G Sbjct: 355 PQHLIPAHQDMKGMAPYAKLAKSQGYK 381 >gi|237732911|ref|ZP_04563392.1| metallo-beta-lactamase [Mollicutes bacterium D7] gi|229383980|gb|EEO34071.1| metallo-beta-lactamase [Coprobacillus sp. D7] Length = 369 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 153/365 (41%), Gaps = 15/365 (4%) Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS--- 259 G + + I +I ++++G +++++++ ++ R + I+++ ++ RKIV G Sbjct: 8 NPGYTSPKHKLTDKIDNIFEDSEGRIIISSYAQNIFRTKEIVELTKKYNRKIVFYGRDKY 67 Query: 260 -SLKRVVSVAIDVGI----IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 S +V + + + K+ + S + + L+V+ +G+ + + Sbjct: 68 DSTNSIVRIGQRLKKAVIQVPKNLIAFSTDIGKKGIDDNLVVLLSGTPQRIYHDICDIID 127 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 G +KL + DT I +S IPG E N L + + + S H Sbjct: 128 GGDEFLKLNKNDTFIVASPVIPGTEKIANKAVNELYKTDSNI--HVLKNKELCSMHASQE 185 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIE-I 431 D+K + Q P V + GE H +++ E+A I + + NG++L +E Sbjct: 186 DIKVIIQIFNPTYFVPVKGEYQHFISNLEVAKNMAIKPENIAIIDNGEILSFKSGKLEDY 245 Query: 432 IDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFGVPEIVDIGI 490 D + + DG +G D I R QLS G + + V +D+ I ++ G Sbjct: 246 RDTIEVEDVMIDGIGVGDVGDKVIDDRIQLSNDGVVIIGVTIDSKTHEIIANTDVQSRGF 305 Query: 491 PAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTV 550 Y D I K ++ V ++ + + +R++I + K GK+P++ Sbjct: 306 -VYLRDSEHIIKGVIDIAEKCVSEMKDDPKLEAVEVRQNIKDKANKFIIKETGKRPVILP 364 Query: 551 FINKI 555 I ++ Sbjct: 365 IIIEV 369 >gi|255018273|ref|ZP_05290399.1| hypothetical protein LmonF_12221 [Listeria monocytogenes FSL F2-515] Length = 228 Score = 193 bits (490), Expect = 8e-47, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 6/231 (2%) Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV 387 V ++ P E + + L + G +V+ + +SGH DLK M ++P+ Sbjct: 1 VYITTTPSPSLETMMAKTMDMLYKAGAKVLT--MSNNLFISGHASQEDLKLMINLLKPRY 58 Query: 388 LVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGF 445 V +HGE L++H +LA + G+A V V G++L D + + V G L DG Sbjct: 59 FVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGL 118 Query: 446 LIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGDGGKIHKLL 504 +G ++ + R+ LS G V V L+ I PEI+ G Y + + + Sbjct: 119 GVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFI-YVRESEHLIEES 177 Query: 505 LKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 K V V Q + L++ I L L + ++P++ I ++ Sbjct: 178 SKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV 228 >gi|196019692|ref|XP_002119023.1| hypothetical protein TRIADDRAFT_62993 [Trichoplax adhaerens] gi|190577275|gb|EDV18491.1| hypothetical protein TRIADDRAFT_62993 [Trichoplax adhaerens] Length = 340 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 182/342 (53%), Gaps = 7/342 (2%) Query: 212 GIKKNIYDIMKNAKGC-VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID 270 + +N+ ++ G +++TTF+S+V+R+ S+++ A++ RKI+L G SL ++ A + Sbjct: 2 ELGRNLEKLLCKHTGKLIIITTFASNVARLLSMVNAAKKAKRKIILQGRSLWKMYLAAKE 61 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 G ++ D + ++ F + R +++VI TG QGE + +++ + + L E D VIF Sbjct: 62 AGYLQ-DTIIYDEKHFKKFKRNEIVVICTGCQGESLAMTTKIADKKHPQISLQEDDIVIF 120 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 SS+ IPGNE I ++ N+L E V V+ E E VHVSGHP ++K+M+Q I+P++ + Sbjct: 121 SSKIIPGNEKKIYNLFNKLAEMNVNVLNEANEF-VHVSGHPSAQEVKKMFQLIQPKIAIP 179 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKF 450 +HGE +HL H +A GI VRNG ++ D + I +V G ++ DG LI Sbjct: 180 VHGEAIHLNEHCRVAKNLGIKQALSVRNGDVIIFDNDEAKKIGKVESGYYIIDGNLILNS 239 Query: 451 ADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVIT 510 + I R+ L G L +++++D + GI D I L + Sbjct: 240 DSIIIKNRKILRDNGALFISIIIDKKKKNINHLYVAAPGILEESLDQD-ILDELKLDIFD 298 Query: 511 TVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFI 552 T ++ D ++ SI +L+ ++K+ K PL+ + + Sbjct: 299 TFKEIS---TLDKNKIKNSIEFSLKKHIRKLINKSPLININV 337 >gi|33322755|gb|AAQ07112.1|AF496424_1 hypothetical protein [Lactobacillus delbrueckii subsp. lactis] Length = 238 Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 119/237 (50%), Gaps = 3/237 (1%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCISFQAGDK 128 IF+TH H D GAL + PV+ S I L + + A + Sbjct: 2 GIFLTHGHADSIGALPYILRD-GXPVFGSKLTIELAKIDVQRENKRRNNQLFNVIDADTE 60 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 +D S+ + HS+P+++ +VI +P G IV+TGD+K D A TD L I Sbjct: 61 IDFKNASVSFFQTTHSVPDSLGIVIHAPQGQIVYTGDFKFDPSARPAYRTDMTRLAEIAE 120 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 G+LAL+ DS+NA SE + I ++ +NAKG ++V +S+++R++ + + A Sbjct: 121 NGVLALLPDSSNAEAVLPNASENEVGTYITNVFRNAKGRIIVAGKASNINRVQQVFNAAA 180 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGE 304 GR+++L G + ++V A+ +G ++ D L + + P E+ +++ TG G Sbjct: 181 ATGRRVLLTGRDVAKIVHTAMKLGYLEVPDGLLMKAKELXDVPDEKTVILETGRMGN 237 >gi|227815538|ref|YP_002815547.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. CDC 684] gi|227006742|gb|ACP16485.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. CDC 684] Length = 157 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 6/142 (4%) Query: 1 MK--NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 MK L + LGGV EIG NM Y ++IDCG FP + L G+DL+ PD+ Sbjct: 1 MKSLKNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLLGIDLIIPDV 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 T++ + ++ + + +TH HEDH G + L+VP+YA+ +GL+E K + Sbjct: 57 TYLQENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDT 116 Query: 119 PCISFQAGDKVDVGAFSIESVR 140 I + ++D G+ ++ Sbjct: 117 ELIVIHSESEIDFGSIKTTFLK 138 >gi|76798509|ref|ZP_00780744.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|76586138|gb|EAO62661.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] Length = 271 Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 6/273 (2%) Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 Y +L+++ TG GEP + L +++ G R V++ + D V + E + + Sbjct: 1 MTRYEDNELLILETGRMGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARV 60 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELA 405 +N + + G V + VSGH +L+ + ++P+ L I GE L AH LA Sbjct: 61 ENLIYKAGGSVKLITQN--LRVSGHANGRELQLLMNLLKPKYLFPIQGEYRDLSAHAGLA 118 Query: 406 LQ--EGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSF 463 + + V+ G ++ L D V G + DG IG ++ + R+ LS Sbjct: 119 QEVGMSADDIYIVKRGDIMVLEKDGFFHSGFVPAGDVMIDGNAIGDVGNIVLRDRKVLSE 178 Query: 464 VGHLSVNVLLDNHYNIFGV-PEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD 522 G V + + + G Y I + + V TTV D D Sbjct: 179 DGIFIVVITVSKKEKKIISKARVNTRGF-VYVKKSRDILRESAELVNTTVEDYLSKDTFD 237 Query: 523 LKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 L+ + + L ++P + + ++ Sbjct: 238 WGELKGKVRDEVSKFLFDQTKRRPAILPVVMEV 270 >gi|227364789|ref|ZP_03848837.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] gi|227070133|gb|EEI08508.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] Length = 262 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 88/228 (38%), Gaps = 6/228 (2%) Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 E + K+ + G V + ++ SGH ND + M +++P+ + I GE Sbjct: 1 SYAQETEVQKTKDMIYRTGAEVKFISDD--LNPSGHANQNDEQLMLNFMKPKFFIPIQGE 58 Query: 395 PLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFAD 452 L H ELA + GI + V G +L + + + + DG +G + Sbjct: 59 YRLLDRHAELAEEVGIPKENIFLVNKGDVLTYKNGKFHVGEHIDVSNTMIDGTGVGDIGN 118 Query: 453 LGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITT 511 + + RR LS G V +D I P+I G + ++ + V Sbjct: 119 IVLRDRRVLSEDGIFVVVATIDRKKKKIVARPQITSRGF-VFVKTNRQLMQQSADLVEKI 177 Query: 512 VVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 V + + D L++ + L L + P++ I +I++ + Sbjct: 178 VQENLDQKEFDWSHLKQDVRDKLNRFLFDQTKRHPVILPVIMEINQHQ 225 >gi|301055287|ref|YP_003793498.1| C-terminla part of metallo-beta-lactamase family protein [Bacillus anthracis CI] gi|300377456|gb|ADK06360.1| C-terminla part of metallo-beta-lactamase family protein [Bacillus cereus biovar anthracis str. CI] Length = 209 Score = 176 bits (446), Expect = 9e-42, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 5/211 (2%) Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 L G V+ E VHVSGH +LK M ++P+ V +HGE AH LA Sbjct: 1 MLFRAGAEVVY-YGERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAED 59 Query: 408 EGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG 465 GI + V G ++ D ++ +V G L DG +G ++ + R+ LS G Sbjct: 60 VGIARENIFIVEKGDVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDG 119 Query: 466 HLSVNVLLDNH-YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK 524 L V V L I PEI+ G Y + + + V V + + Sbjct: 120 ILVVVVTLGKDEKKIISGPEIISRGF-VYVRESEALIDRSTEIVRMIVEQSIKEYSIEWS 178 Query: 525 LLRESISSALRSLLKKVWGKKPLVTVFINKI 555 +L+++I L L + +KP++ I ++ Sbjct: 179 MLKQNIRELLGQFLYEETKRKPMILPIIMEV 209 >gi|228964696|ref|ZP_04125803.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794946|gb|EEM42445.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] Length = 203 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 4/204 (1%) Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--C 412 + + VHVSGH Y +LK M ++P+ + IHGE L H LA GI Sbjct: 1 MIYGSGSSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGIEKEN 60 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVL 472 + VRNG ++ + + + G DG IG + + R+QLS G L + + Sbjct: 61 IFIVRNGDVVDISNEVAIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVIT 120 Query: 473 LDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 + I P+I+ G Y D + + L K + T+ +L + +L+ + Sbjct: 121 FNKVDGEIISGPDIISRGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVR 179 Query: 532 SALRSLLKKVWGKKPLVTVFINKI 555 AL + +KP++ I ++ Sbjct: 180 EALGKYIYTNTKRKPMILPIIIEV 203 >gi|23683069|gb|AAN39384.1| conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 180 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 7/180 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +PLGGV EIG + + +G + ++ID G+ F G+ + PD ++ + + Sbjct: 5 RIIPLGGVQEIGKSTLIIEHG----KHIVIIDAGIKFADTATTGIKGIVPDYKYLKERKD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L +H+ +YA AI L+ K +++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPRIAIQYLKLKFEEHKITHKVEFIEIEK 120 Query: 126 GDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G ++ HSIP+ + + +P G+++ TGD++ D + I TD L Sbjct: 121 SAVHEFGNGQVKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKL 180 >gi|325973704|ref|YP_004250768.1| hypothetical protein MSU_0878 [Mycoplasma suis str. Illinois] gi|323652306|gb|ADX98388.1| conserved hypothetical protein [Mycoplasma suis str. Illinois] Length = 558 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 91/565 (16%), Positives = 204/565 (36%), Gaps = 22/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L + LGG E + + +++ G S +L +D V PD + ++ Sbjct: 3 RLKYYSLGGQDEKFR----FSGVLELNGDIFILNAGGSCVNTNLYEIDDVIPDYSSLIPL 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEA---KRVYERVSKKIPC 120 + + +FI E + +L VP++ + F ++ + E K P Sbjct: 59 KPKIRGLFIGVPKELNISSLPYFLDVFSEVPIFTNSFGESIIRDFLERFHEEGGKKYNPN 118 Query: 121 ISFQAGDKVDVGA----FSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILG 175 I I ++V S+P ++A + +V ++ + + + Sbjct: 119 IVALNLISEHAVPGSNDCKILPIKVAASLPNSLAWAFKFSGSDYVVFMDEFLMSSENVPC 178 Query: 176 DVTDKDSLCAIGNEGILALMCDSTN-AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + L + L+ + + A + + + + V + Sbjct: 179 RENQLNFLFQNLKNKVSLLIVGTQSCATVPSFSLKVADNFSYLKKLTSRISTRLNVAAYK 238 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 + ++ IA +++ R+ + I +K L +S+E+ Q+ Sbjct: 239 DDWHTLFNLSRIARIYEYDLLIYPLKTSRMFNSFITENKLKNYSLSVSEETSRREGVVQI 298 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +I G+ S L ++ GE+++ + D +F + E+ + N + +G Sbjct: 299 RIIT-GTHNTLYSNLRAINSGEVKDWEFLPTDVTVFMTSTFTERELEEISMINEIAHRGG 357 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH-KELALQEGIACV 413 V+ + +++G DLK + ++ P ++ ++G V K L I + Sbjct: 358 EVLKLPSTIVPYMAG---AEDLKLLVNYLSPYHVIPVNGFYKDYVEFTKALTNVMNIDKI 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + NG+ + + + I + I + I +RR ++ G + V+V Sbjct: 415 YFLENGQYVNIEKKNVSITEN-PLQEIYVGNKKILDINRITIYERRLIAQSGVVLVSVRC 473 Query: 474 DNHYNIFGVPEIVDIGIPAYD--GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 ++ NI P + + + + D + ++ L Q + K L++SI Sbjct: 474 NSKKNIVSNPMVQMLSVFSDDFSKKDEVLLRIQTNLKQDISKYLQQNSEIENKGLKQSIR 533 Query: 532 SALRSLLKKVWGKKPLVTVFINKIS 556 ++ + L KKP V I+ I+ Sbjct: 534 KSVYNSLDPFIYKKPAVVSVISHIN 558 >gi|288921707|ref|ZP_06415974.1| hydrolase of the metallo-beta-lactamase superfamily-like protein [Frankia sp. EUN1f] gi|288346879|gb|EFC81189.1| hydrolase of the metallo-beta-lactamase superfamily-like protein [Frankia sp. EUN1f] Length = 146 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 5/125 (4%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L + LGG+GEIG NM ++ + + +++DCGV FP+ D PGVDL+ PD T I Sbjct: 17 DGLRIIALGGLGEIGRNMTVFEHA----GRLLIVDCGVLFPETDQPGVDLILPDFTAIRD 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ A+ +THAHEDH GA+ L +P+ + + L+ AK R+ I Sbjct: 73 RLDDIEAVILTHAHEDHIGAVPYLLRERRDIPLIGTRLTLALMVAKLQEHRIQPVTLQIR 132 Query: 123 FQAGD 127 + Sbjct: 133 EEERH 137 >gi|325990147|ref|YP_004249846.1| hypothetical protein Msui08040 [Mycoplasma suis KI3806] gi|323575232|emb|CBZ40897.1| conserved hypothetical protein [Mycoplasma suis] Length = 558 Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 91/565 (16%), Positives = 204/565 (36%), Gaps = 22/565 (3%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L + LGG E + + +++ G S +L +D V PD + ++ Sbjct: 3 RLKYYSLGGQDEKFR----FSGVLELNGDIFILNAGGSCVNTNLYEIDDVIPDYSSLIPL 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEA---KRVYERVSKKIPC 120 + + +FI E + +L VP++ + F ++ + E K P Sbjct: 59 KPKIRGLFIGVPKELNISSLPYFLDVFPEVPIFTNSFGESIIRDFLERFHEEGGKKYNPN 118 Query: 121 ISFQAGDKVDVGA----FSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILG 175 I I ++V S+P ++A + +V ++ + + + Sbjct: 119 IVALNLISEHAVPGSNDCKILPIKVAASLPNSLAWAFKFSGSDYVVFMDEFLMSSENVPC 178 Query: 176 DVTDKDSLCAIGNEGILALMCDSTN-AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + L + L+ + + A + + + + V + Sbjct: 179 RENQLNFLFQNLKNKVSLLIVGTQSCATVPSFSLKVADNFSYLKKLTSRISTRLNVAAYK 238 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 + ++ IA +++ R+ + I +K L +S+E+ Q+ Sbjct: 239 DDWHTLFNLSRIARIYEYDLLIYPLKTSRMFNSFITENKLKNYSLSVSEETSRREGVVQI 298 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +I G+ S L ++ GE+++ + D +F + E+ + N + +G Sbjct: 299 RIIT-GTHNTLYSNLRAINSGEVKDWEFLPTDVTVFMTSTFTERELEEISMINEIAHRGG 357 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH-KELALQEGIACV 413 V+ + +++G DLK + ++ P ++ ++G V K L I + Sbjct: 358 EVLKLPSTIVPYMAG---TEDLKLLVNYLSPYHVIPVNGFYKDYVEFTKALTNVMNIDKI 414 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLL 473 + NG+ + + + I + I + I +RR ++ G + V+V Sbjct: 415 YFLENGQYVNIEKKNVSITEN-PLQEIYVGNKKILDINRITIYERRLIAQSGVVLVSVRC 473 Query: 474 DNHYNIFGVPEIVDIGIPAYD--GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS 531 ++ NI P + + + + D + ++ L Q + K L++SI Sbjct: 474 NSKKNIVSNPMVQMLSVFSDDFSKKDEVLLRIQTNLKQDISKYLQQNSEIENKGLKQSIR 533 Query: 532 SALRSLLKKVWGKKPLVTVFINKIS 556 ++ + L KKP V I+ I+ Sbjct: 534 KSVYNSLDPFIYKKPAVVSVISHIN 558 >gi|83583646|gb|ABC24680.1| conserved hypothetical protein [Mycoplasma agalactiae] Length = 180 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 7/180 (3%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +P+GGV EIG + + +G + ++ID G+ F G+ + PD ++ + + Sbjct: 5 RIIPIGGVQEIGKSTLIIEHG----KHIVIIDAGIKFADTATTGIKGIVPDYKYLKERKD 60 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ +FITH HEDH G + L +H+ +YA AI L+ K +++ K+ I + Sbjct: 61 NIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPRMAIQYLKLKFEEHKITHKVEFIEIEK 120 Query: 126 GDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + G ++ HSIP+ + + +P G+++ TGD++ D + I TD L Sbjct: 121 SAVHEFGNGQVKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKL 180 >gi|261886274|ref|ZP_06010313.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 161 Score = 167 bits (422), Expect = 6e-39, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ PLGG+GEIG NM ++ + I++D G+SFP + + GVD++ PD +I Sbjct: 35 SEHKIKITPLGGLGEIGGNMTVFE----TDNDAIIVDIGMSFPSESMHGVDILIPDFDYI 90 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 K ++ + I ITHAHEDH GA+ + P+YA+P +G++ K + Sbjct: 91 RKIKQKVRGIIITHAHEDHIGAVPYFFKEFQFPIYATPLPLGMISNKFEEHGLK 144 >gi|207092921|ref|ZP_03240708.1| conserved hypothetical ATP-binding protein [Helicobacter pylori HPKX_438_AG0C1] Length = 278 Score = 166 bits (420), Expect = 9e-39, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + PLGG+GEIG NM + + + I+ID G+SFPK+ L GVD++ PD +++ Sbjct: 140 SKASVKITPLGGLGEIGGNMMVIE----TPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL 195 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPC 120 + + + I ITHAHEDH GA L+ L P+Y +P ++GL+ +K + K Sbjct: 196 HQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGSKFDEHGLKKYRSYF 255 Query: 121 ISFQAGDKVDVGAFSIESVRVNH 143 + + VG F IE + + H Sbjct: 256 KIVEKRCPISVGEFIIEWIHITH 278 >gi|167757005|ref|ZP_02429132.1| hypothetical protein CLORAM_02554 [Clostridium ramosum DSM 1402] gi|167703180|gb|EDS17759.1| hypothetical protein CLORAM_02554 [Clostridium ramosum DSM 1402] Length = 286 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 7/273 (2%) Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 + L+V+ +G+ + + G +KL + DT I +S IPG E Sbjct: 17 KKGIDDNLVVLLSGTPQRIYHDICDIIDGGDEFLKLNKNDTFIVASPVIPGTEKIANKAV 76 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 N L + + + S H D+K + Q P V + GE H +++ E+A Sbjct: 77 NELYKTDSNIH--VLKNKELCSMHASQEDIKVIIQIFNPTYFVPVKGEYQHFISNLEVAK 134 Query: 407 QEGI--ACVPPVRNGKMLRLFPDPIE-IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSF 463 I + + NG++L +E D + + DG +G D I R QLS Sbjct: 135 NMAIKPENIAIIDNGEILSFKSGKLEDYRDTIEVEDVMIDGIGVGDVGDKVIDDRIQLSN 194 Query: 464 VGHLSVNVLLDNHY-NIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKD 522 G + + V +D+ I ++ G Y D I K ++ V ++ + + Sbjct: 195 DGVVIIGVTIDSKTHEIIANTDVQSRGF-VYLRDSEHIIKGVIDIAEKCVSEMKDDPKLE 253 Query: 523 LKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 +R++I + K GK+P++ I ++ Sbjct: 254 AVEVRQNIKDKANKFIIKETGKRPVILPIIIEV 286 >gi|254993977|ref|ZP_05276167.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL J2-064] gi|255030956|ref|ZP_05302907.1| metallo-beta-lactamase family protein [Listeria monocytogenes LO28] Length = 178 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 4/179 (2%) Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC--VPPVRNGKMLRLFPDPIEIIDEVVH 437 ++P+ V +HGE L++H +LA + G+A V V G++L D + + V Sbjct: 1 MNLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYS 60 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYN-IFGVPEIVDIGIPAYDGD 496 G L DG +G ++ + R+ LS G V V L+ I PEI+ G Y + Sbjct: 61 GNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFI-YVRE 119 Query: 497 GGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 + + K V V Q + L++ I L L + ++P++ I ++ Sbjct: 120 SEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV 178 >gi|228475029|ref|ZP_04059757.1| ribonuclease J 2 [Staphylococcus hominis SK119] gi|228271014|gb|EEK12402.1| ribonuclease J 2 [Staphylococcus hominis SK119] Length = 126 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 4/117 (3%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN+++ +PLGGVGEI NM + + M+D G+ FP+D++ GVD+V PDI ++ Sbjct: 7 KNDDIRIIPLGGVGEIAKNMYIVE----VDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYV 62 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ + L IF++H HE GA+ + + P+Y S + L++ + KK+ Sbjct: 63 VENKDKLKGIFLSHGHEHAIGAVSYILEQVDAPIYGSKLTLALVKESIKKRNIKKKV 119 >gi|308808075|ref|XP_003081348.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri] gi|116059810|emb|CAL55517.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri] Length = 404 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 2/149 (1%) Query: 43 FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPF 100 F G+ V PD++F+ + R + A+ ITH HEDH GAL + L P+YA F Sbjct: 26 FRSRCELGIQKVLPDVSFLHRWRDKIEAVLITHGHEDHIGALPWVIPALDPATPIYAGLF 85 Query: 101 AIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + L++ + + + F ++ G F +E+VRV HSIP+ L+ RS G I Sbjct: 86 TMQLIKRRMLEYSLWNDDRFKVFNMNERFQAGPFDMEAVRVTHSIPDCCGLIFRSEHGTI 145 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 VHTGDWK+D+ + G D+ S +G E Sbjct: 146 VHTGDWKIDETPVDGLHFDRTSWERVGQE 174 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 7/161 (4%) Query: 400 AHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRR 459 H + + V P+ K + + + +F G G D+ I +R Sbjct: 185 MHTTVIGNGEMLGVTPLAKKKQHGTLGNFHRVGKARLQTMFNDGGIGSGTSEDMAIEERM 244 Query: 460 QLSFVGHLSVNVLLDNHYN--IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQ 517 +++ G + + + N + I + G D G++ + + D+P Sbjct: 245 RIAVEGVIVCDYEIANAGDDLISAKARVTSRG---MWTDDGRLLEACRVAAVQATGDMPV 301 Query: 518 FRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 + L + ++SS++R+ ++ K+P V V ++ Sbjct: 302 NSK--LSAVERAVSSSIRAAVRTYCNKRPDVIVVAHRAGEH 340 >gi|254993247|ref|ZP_05275437.1| hypothetical protein LmonocytoFSL_09627 [Listeria monocytogenes FSL J2-064] Length = 119 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 59/119 (49%) Query: 42 SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 FP+++L G+D+V PD ++ + + + A+F+TH HED GAL L + PVY + Sbjct: 1 MFPENELLGIDIVIPDFKYLEENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELT 60 Query: 102 IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 I L ++ R + + + R H+IP+++ +V+ + G+I Sbjct: 61 IALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSI 119 >gi|224133916|ref|XP_002321691.1| predicted protein [Populus trichocarpa] gi|222868687|gb|EEF05818.1| predicted protein [Populus trichocarpa] Length = 375 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 24/319 (7%) Query: 254 IVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 +V +G SL+ + A G D + E Y + L+++ TGSQ EPR+AL Sbjct: 1 MVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLA 60 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 S G +KL ++D +++S++ IPGNE + + NR+ E G ++ +H SGH Y Sbjct: 61 SYGSSHALKLNKEDVILYSAKVIPGNESRVMKMMNRISEIGSTIV-IGKNELLHTSGHGY 119 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML--------RL 424 +L+ + + ++PQ + IHGE L L H+ L GI ++NG+ML R+ Sbjct: 120 RGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIQHTAVIKNGEMLGVSHLRNRRV 179 Query: 425 FPDPIEIIDEVVHGLFLKDGF-LIGKFADLGIAKRRQLSFVGHLSVNVLLDN-------- 475 + + + L DG G +L + +R +++ G + V++ + Sbjct: 180 LSNGFVFLGKENLQLMYNDGDKAFGTSTELCVDERMRIATDGIVVVSMEILRPQNADGLV 239 Query: 476 HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALR 535 ++ G +I D GK+ L K + P L + ++S LR Sbjct: 240 ENSLKGKIKITTR---CLWLDKGKLLDALHKAAHAALSSCPVNCP--LAHMERTVSEVLR 294 Query: 536 SLLKKVWGKKPLVTVFINK 554 +++K GK+P V + Sbjct: 295 KMVRKYSGKRPEVIAVAME 313 >gi|75764955|ref|ZP_00744290.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487557|gb|EAO51438.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 166 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 1/164 (0%) Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + IG+EG+LAL+ +STNA R G SE+ + + I +I A V+++TF+S+V+R++ Sbjct: 1 MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ 60 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK-KDQLFLSDESFGLYPREQLIVIATGS 301 I++ + RK+ LLG S+ VV VA++ G + D + + +Q+ ++ TGS Sbjct: 61 IVEACIKTNRKLALLGRSMVNVVEVALEKGYLHIPDGMLIEANEVNRLDPKQVALLCTGS 120 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 QGEP +ALA+L+ G R V + +DTVI ++ IPGNE + I Sbjct: 121 QGEPMAALARLASGNYRQVDILPEDTVIIAATPIPGNERNVSRI 164 >gi|120601907|ref|YP_966307.1| beta-lactamase domain-containing protein [Desulfovibrio vulgaris DP4] gi|120562136|gb|ABM27880.1| beta-lactamase domain protein [Desulfovibrio vulgaris DP4] Length = 414 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 147/416 (35%), Gaps = 49/416 (11%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG--VSFPKDDLPGVDLVFPDI 58 M + + EIG N + +++D G + P+ P + D+ Sbjct: 1 MSDVRITIHR--AASEIGGNCIEI---TTEDGARLILDVGRPLDVPESLEPQLPASL-DL 54 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSK 116 + K + + ++H H+DHYG L L PV++ A L+ Sbjct: 55 S------KPVEGVLLSHPHQDHYG----LLQQLPTSWPVFSGDAAAKLIRLTSEIIHEPI 104 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 ++ +G G F I + +HS + + I I+++GD++ Sbjct: 105 TRSISTWLSGSPFPAGPFRITPLLTDHSAFDAYMIQIEVAGKKILYSGDFRT----HGRK 160 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + L A E + AL+ + TN + CISE +++ D+ + G V V + + Sbjct: 161 KALVERLMASPPENLDALIMEGTNLGSDKPCISESTLEEQFVDLFQKTAGRVFVAWSAQN 220 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLK-------------------RVVSVAIDVGIIKKD 277 + R S+ ++ GR +V+ + + +VV + ++ Sbjct: 221 LDRTVSLYRACKKTGRTLVVDLYTAEVLEMLGEHAKIPQPGWPNLKVVITSRLAEFYRRK 280 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG 337 E + + T + + + L E + V D ++S Sbjct: 281 GREDVTERMVAHGISAQRLAETPGRWVVMTRGSLLGDYERKGVAPNASDVWVWSMWRGYL 340 Query: 338 NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + +K G +H SGH DLK Q + P+VL+ +HG Sbjct: 341 EKTPGQGVKAWFDSFGAPSAH------LHTSGHASTADLKEFAQKMNPKVLLPVHG 390 >gi|239904761|ref|YP_002951499.1| hypothetical protein DMR_01220 [Desulfovibrio magneticus RS-1] gi|239794624|dbj|BAH73613.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 415 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 78/400 (19%), Positives = 161/400 (40%), Gaps = 40/400 (10%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMAIF 72 EIG N + S+ + +++D G P D GV + + P + ++ + Sbjct: 12 AHEIGGNCIEL---TSSTGQSLLLDAGR--PLDAPVGVTEGLVPTT---LDTSASVEGLL 63 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ++H H+DHYG L L + PVYA L++ V+ S+++G +G Sbjct: 64 LSHPHQDHYGLLGVLPAAW--PVYAGAACEKLVKLTGRIFGVTPPQHFNSWKSGVPFAIG 121 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F+I ++HS + L+I + ++++GD+++ + A E + Sbjct: 122 PFTITPYLIDHSAFDAYMLLIEAHGKRLLYSGDFRMHGRKGKL----VRDIMANPPENLD 177 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 AL+ + TN + SE ++ D+ +N KG V V+ + ++ R ++ Q R Sbjct: 178 ALIMEGTNLGSDKPSCSEVELENRFVDLFRNTKGRVFVSWSAQNIDRTVTLYRACLQSNR 237 Query: 253 KIVLLGSSLK-------------------RVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +V+ + + +VV + + + + Sbjct: 238 VLVIDLYTAEVLEVLAKFGRLPRPGWRNLKVVVTSSFARVYRNAGREDFVARMAKFGIAA 297 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 + AT S+ + + + E + V ++D+ +S + ++ +K+ Sbjct: 298 DKLAATPSKWVIMTRPSLIRDYEFKGVMPTQEDSWCWSMWSGYLSKDDGQKVKSWFDSGQ 357 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + +H SGH +DL++ Q + P+VL+ IHG Sbjct: 358 SQPYH------IHTSGHASTDDLQKFAQVMNPRVLIPIHG 391 >gi|319790032|ref|YP_004151665.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] gi|317114534|gb|ADU97024.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] Length = 419 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 89/430 (20%), Positives = 148/430 (34%), Gaps = 59/430 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN F+P+GG EIG + Y + I++D G+ F K++ PD Sbjct: 1 MKN---FFIPIGGGNEIGASCYFYSVNGVN----IVVDAGIRFSKENPY------PDFDL 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLL------EAKRVYER 113 + L AI +THAH DH GA+H L P+YA+ LL K Y Sbjct: 48 LKALAPKLDAIVVTHAHVDHCGAVHLLSELYPDTPIYATFETAQLLSLMVEDAIKVRYIG 107 Query: 114 VSKKIPCISF-------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRS-PVGN 159 + + + DK+ V IE H I ++VIR + Sbjct: 108 GESQEEWREYSLLDKALSRLERREFHDKITVKDVEIELFPAGH-ILGAASVVIRYGEGES 166 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + HTGD L + +G + L+ +ST E+ ++ Sbjct: 167 VYHTGDISLFEQRTVGA-------AELPEPNPSLLVSESTYLHTPKRKSREEQEEEFYTA 219 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSI---IDIAEQIGR----KIVLLGSSLKRVVSVAIDVG 272 + + +G V ++ R + I + + GR ++++ G + + +G Sbjct: 220 VRRTVEGGGKVLIPVFALGRAQEILLLLTEGMRSGRIPPVRVLVDGLAKEVSTIYGSFLG 279 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL-----AEKDT 327 + + P ++ S S L G V K Sbjct: 280 RSFFNYYVQPSPGYAGVPFKEACKQNLKSADCIVSTSGMLMEGTPSYVYASLLAQDPKSA 339 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV 387 ++FS + E + H S H +LKR+ + + P+ Sbjct: 340 ILFSGYMVE--ESFGYRLLKDRELLRA---FRCRLERHHFSAHSGQEELKRLTEELSPKK 394 Query: 388 LVAIHGEPLH 397 L +HG PLH Sbjct: 395 LAFVHGFPLH 404 >gi|218782631|ref|YP_002433949.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764015|gb|ACL06481.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 433 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 145/418 (34%), Gaps = 51/418 (12%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD-----------LVFPDITFI 61 G IG + G + I+ D G+ + D ++ ++ PD+ + Sbjct: 9 GARTIGGSCIEIQSG----NRRILFDLGMPLMETDGAEINPGKAASPSIENVILPDVPGL 64 Query: 62 MKERKN-LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-KRVYERVSKKIP 119 ++ + AIFI+HAH DHYG L+ + +PVY SP L++ Y + + Sbjct: 65 YSNQEPGVDAIFISHAHPDHYGLLNYVHP--SIPVYMSPGTNALIDIGNVFYAQKTNIQN 122 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 FQ + + +G F I ++HS P+ +I I ++GD++ Sbjct: 123 RRVFQQWEPISLGPFVITPHLMDHSGPDASGFLIEVEDKRIFYSGDFRGHGRKGKL---- 178 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGT--CISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + G + L+ + T +E ++K + +I N K V S++ Sbjct: 179 LGLMEKQGLSELDCLLMEGTTLGGMHDAGFPTEADVEKAMQEIFSNQKDVTFVMASGSNL 238 Query: 238 SRIRSIIDIAEQIGRKIV--------------------LLGSSLKRVVSVAIDVGIIKKD 277 RI SI A + + +V G RV+ + + Sbjct: 239 DRIVSIYKAARRSEKTLVIDLYTCHLLNELKKIWPSLPPHGGDNLRVLYAKGHADRLVES 298 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG 337 + ++ ++ Q R L ++ R + F G Sbjct: 299 CGREMLYKYSGRQIKEDEILKNREQMILRIPLNRMDRIARIMAEEKPLAQASFIFSMWTG 358 Query: 338 NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 ++ + +H SGH Y DLKR+ +P+ L+ +H Sbjct: 359 Y------LQKDRSFADFYKVHNMKPELIHTSGHAYLEDLKRLVDIFKPKTLIPVHTLH 410 >gi|146163951|ref|XP_001012725.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila] gi|146145850|gb|EAR92480.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila SB210] Length = 750 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 78/511 (15%), Positives = 160/511 (31%), Gaps = 78/511 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 +V PLG E+G + + Y K IM DCG+ K+ P I Sbjct: 1 MVIYPLGAGQEVGRSCIILEY----KGKTIMFDCGLHMGKNGH----ASLPYFDNIK--P 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEAKR------VYERV 114 + IFITH H DH AL + VYA+ + E + Sbjct: 51 DQIDIIFITHFHLDHCAALPYFIAKTDFDGKKQKVYATSPTRAIYRHVLRDSLTDKSENI 110 Query: 115 SKKIPCISFQAGDKVDVGAF---------SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ + ++V F + H + ++ +++TGD Sbjct: 111 KLYTADDIEKSMEVINVIDFYEEMEHENIKFKCYPAGH-VLGAAMFLVEIDGVRVLYTGD 169 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 + + D ++ I NE + L+ + T SE+ ++ ++M+ K Sbjct: 170 YSTEKDILIPP-------AQIPNEKVDVLIVEGTYGKCNHESRSERE-QQLTQEVMRIVK 221 Query: 226 GCVLVTTFSSSVSRIRSII----------------------DIAEQIGRKIVLLGSSLKR 263 ++ R + I+ + +I S+ Sbjct: 222 NKGQCLLPVFALGRAQEIVLILEEFWKQNSSELADIKIHFTQNLSKKANQIFQYYKSMMA 281 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + + + VI + P + + +SR + + Sbjct: 282 DPIRKNQLNPFNLHYAPNNITKHDEIDENKPCVILSS----PFNLQSGISRTIIERICSK 337 Query: 324 EKDTVIFS--------SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 ++ VI + S+ I NE N +++ G ++ + + S H N Sbjct: 338 PQNGVILTGFCPENTLSKEIQ-NEKQ-DKTINSIID-GRKIPFNMSVKNISFSAHADLNQ 394 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVA-HKELALQEGIACVPPVRNGKMLRLFPDPIEIIDE 434 + I PQ ++ +HG + + KEL V N + + + E Sbjct: 395 TTNFIRAIEPQHVILVHGSSIKIKELQKELMKTFVGLQVHAPNNQQKICFNLNATESCKI 454 Query: 435 VVHGLFLKDGFLIGKFAD-LGIAKRRQLSFV 464 V +++ + + +++ ++ Sbjct: 455 VGELEKQISQYILQYVQEIESLKQQQAIANE 485 >gi|147677033|ref|YP_001211248.1| beta-lactamase fold exonuclease [Pelotomaculum thermopropionicum SI] gi|146273130|dbj|BAF58879.1| predicted exonuclease of the beta-lactamase fold [Pelotomaculum thermopropionicum SI] Length = 436 Score = 137 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 81/423 (19%), Positives = 161/423 (38%), Gaps = 55/423 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDL---PGVDL----VFPD 57 G +IG + G I+ID G+ F L G +L + PD Sbjct: 8 GTHDIGGSCVELQSG----DSRIIIDLGLPLAAKDDSRFDSSTLRLRTGAELVNSGILPD 63 Query: 58 ITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 I + + + A+F++HAH DHYG ++ + VPVY+ L+E ++ + Sbjct: 64 IRGLYAWDTECRRIDALFLSHAHIDHYGLVNFISP--DVPVYSGEATRRLMELTTMFWPL 121 Query: 115 SKK-IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + +F G V G F + V+HS + A +I + ++ ++GD++ Sbjct: 122 GRVGGKPSTFANGVPVYTGEFRVTPFLVDHSAFDAYAFLIEAEGKSVFYSGDFRE---HG 178 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDIMKNAKGCVLVTT 232 + + A+ + + ++ + T R I +EK ++ N+ ++ + LV + Sbjct: 179 RKPSALRAIVKALSGKPVDVMLLEGTTFGRPEEKILTEKELEDNLVRVIGSRNEICLVCS 238 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLL---------GSSLKRVVSVAIDVGIIKKDQLF--- 280 ++ R+ + A + + V+ R+ + ++ + Sbjct: 239 SGQNIDRLVTFYRAALRCDKIFVVDVYTAVVLDALRDFARIPYPSSQYSNLRVFFPYWLS 298 Query: 281 ----LSDESFGLYPREQLIVIATGSQGEPRSALAQL---SRGEMRNVKLAEKDTVIFSSR 333 S LY L + + + R L + G++R + + I+S Sbjct: 299 RRLSGSGHVDVLYRYRGLKITRRELEEQQRRVLMLVRPSMIGDLRRINFT-GGSFIYSMW 357 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 E A+ + N EQ + +H SGH P LK++ +RP+ ++ IH Sbjct: 358 LGYQKEPAMARLLNFAREQDLEYYY------IHTSGHAPPQTLKKLVDTLRPKEVIPIHT 411 Query: 394 EPL 396 Sbjct: 412 FYP 414 >gi|116619913|ref|YP_822069.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223075|gb|ABJ81784.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 415 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 135/399 (33%), Gaps = 39/399 (9%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 +IG N I++D G P D + P + + + I+ Sbjct: 13 HQIGGNCVEIS---TEDGHRIILDVGR--PLDAPQSARGLLPKS---LDIGSPIDGVLIS 64 Query: 75 HAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 H H+DHYG + + P+Y L++ +++G VG Sbjct: 65 HPHQDHYG----VLEDVPADWPIYPGEPTARLIKLTSAVLGKQLLHTFQPWKSGVPFQVG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F++ + +HS + L+I I+++GD++ L + + Sbjct: 121 PFAVTPLLTDHSAFDAHMLLIEVHGKRILYSGDFRT----HGRKSVLPRRLMKSPPKNLD 176 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 L+ + TN + +C++E ++ + ++ + G V V + +V R ++ + GR Sbjct: 177 ILLMEGTNLGSDKSCVTESDLENDFVELFRGTAGRVFVAWSAQNVDRTVTLYRACLKTGR 236 Query: 253 KIVLLGSS---LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 +++ + ++ + + + ++FG RE A Sbjct: 237 TLIVDLYTAEVMEALAEFGKLPRPSWNNLKVVITKAFGKVYRETGRADFVDRVAPYGIAA 296 Query: 310 AQLSRGEMRNVKL--------------AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 A+L+ R V + + G + Q Sbjct: 297 ARLAETPSRWVAMVRSSLIRDYVANDVQPNSDDAWCWSMWQGY----LKNEEGARVQAWF 352 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 +H SGH P+ L+ Q + + L+ IHG+ Sbjct: 353 EEGGSRAAQIHTSGHASPSQLRTFAQAMNAEQLIPIHGD 391 >gi|169837080|ref|ZP_02870268.1| hypothetical protein cdivTM_08253 [candidate division TM7 single-cell isolate TM7a] Length = 280 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 10/228 (4%) Query: 340 VAIGHIKNRLVEQGVRVIAEDAE-----CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + L+ +G VI P+H+SGH Y +D ++ + P + IHGE Sbjct: 8 KYVVRTVDGLMREGSDVIQNGKTHLTGIGPLHLSGHGYYDDHVKLINALNPTFYMPIHGE 67 Query: 395 PLHLVAHKELALQE---GIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFA 451 LV + ELA +E + +G +L PD + + + + Sbjct: 68 FHMLVHNAELAEKECAIPRENIFVCDSGDVLEFTPDGKGYKNGRIPVGGVMYDDSGAIVS 127 Query: 452 DLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVIT 510 ++ + R +S G V + + + P+I+ G Y D ++ L+ + + Sbjct: 128 EVVLKDRIHMSQEGMFIVVLTIQKGTGRLLTSPDIISRGFI-YLRDSEELMNLIRQYLKQ 186 Query: 511 TVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 + ++ D+ +L++ + + LL + P+V IN+I+ + Sbjct: 187 KIARSFGGKKVDMDVLKKELKDEITHLLYDQTHRTPIVIPVINEINTR 234 >gi|124027362|ref|YP_001012682.1| putative exoribonuclease [Hyperthermus butylicus DSM 5456] gi|123978056|gb|ABM80337.1| putative exoribonuclease [Hyperthermus butylicus DSM 5456] Length = 427 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 152/447 (34%), Gaps = 54/447 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L LGG GE+G L R I++D GV+F ++D P +P Sbjct: 1 MAKIALRI--LGGGGEVGRLSVLVRVRPE-ERDGILLDAGVNFDEEDRPVFAATYP---- 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIP 119 K + A+ ++HAH DH G + VYA+ + + + +++ Sbjct: 54 ----PKYVKAMILSHAHLDHIGTAPMYFISGRPRVYATKPTLEMAKLMLEDFLKLNGYYS 109 Query: 120 CISF-------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 G ++D+ H +P + V+ + TGD Sbjct: 110 PYEHYEVKLLLEAGEKIHYGQRIDIDGVEATFYSAGH-VPGSTFTVLDIDGTRMGFTGDI 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAK 225 + + + + ++ L+ ++T + + +I + + K Sbjct: 169 NTIETKL-MKPANHHIIGSL-----DILVTEATYGSSLHPPRANAEKRLLSIIEETIDRK 222 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G VL+ FS ++R + I+ I + + + + R ++ + + L ++ Sbjct: 223 GTVLIPAFS--IARGQEIMMILAEHDPGVPVYVDGMIRQITEIFLENPEYINNVNLLRKA 280 Query: 286 FGLYP------------REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + + RE ++IA+ + +L L R + ++ +I S Sbjct: 281 YEEFNIVRGWRDRNKAWREPAVIIASAGMLKGGPSLYYLKR-----LGSNPRNAIILVSF 335 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 PG I + + S H N L + + +P+ +V +H Sbjct: 336 QAPG--SNGRRILEEGLMPDTEEPVRARVEWLDFSSHADRNGLLDVVRTTKPRYIVVVHS 393 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGK 420 E V + EL GI V Sbjct: 394 EADVAVKYAELLRSTGIPEEVIVAENN 420 >gi|314933285|ref|ZP_07840650.1| ribonuclease J 1 (RNase J1) [Staphylococcus caprae C87] gi|313653435|gb|EFS17192.1| ribonuclease J 1 (RNase J1) [Staphylococcus caprae C87] Length = 190 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 3/170 (1%) Query: 392 HGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK 449 +GE L AH + ++ G+ V G +L L D + G L DG IG Sbjct: 1 NGEYRMLKAHGQTGVECGVDEDNVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGD 60 Query: 450 FADLGIAKRRQLSFVGHLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTV 508 ++ I R+ LS G + V V +D N + P+I+ G G I+ K Sbjct: 61 IGNVVIRDRKLLSKEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIK 120 Query: 509 ITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQ 558 + L + ++ SI L+ L + ++P++ I K++ Sbjct: 121 TDVISKLNGNKDIQWHQIKSSIIETLQPYLYEKTARRPMILPVIMKVNED 170 >gi|145478255|ref|XP_001425150.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392218|emb|CAK57752.1| unnamed protein product [Paramecium tetraurelia] Length = 690 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 69/454 (15%), Positives = 146/454 (32%), Gaps = 63/454 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N +L+ PLG E+G + L + K IM DCG+ + GV + P I Sbjct: 5 NSKLIITPLGAGNEVGRSCILLQF----QEKQIMFDCGIHM-NKENKGV-MALPYFNKI- 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGL--------LEAK---- 108 + +++ I ITH H DH GAL +Y + + ++ K Sbjct: 58 DKIEDIDLILITHFHLDHCGALPYFLKNYKFKGKIYMTTPTKEIYGLVLKDSIKVKSEDF 117 Query: 109 ----RVYERVSKKIPCISF-QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + + + I ++ ++ H + ++ +++T Sbjct: 118 SQDLINEQSIEQSLKNIDCIDYDQEIHYQGIKLKCYNAGH-VLGAAMFMVEIDGVRVLYT 176 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ + + L + E I L+ ++T + +++ + + +I+ Sbjct: 177 GDYSTEKERHL-------RPAQLPLEKIHVLIVEATYGDTQHETRTKRE-ENFLKEIVST 228 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI---GRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 G V + R ++ I ++ ++ + + + Q Sbjct: 229 LNGGGNVLLPVFATGRCHELLIILDEYWSKNPQVQQFP----IYSTCTLAIKCTHIFQKH 284 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV 340 + + E L + + + L+ + + V + S+ I E Sbjct: 285 FNKLGNKYHKGENLFKFNHINTKKHLQDI--LNNQKPKVVMASPGLLQSGHSKQI--YEY 340 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVH--------------VSGHPYPNDLKRMYQWIRPQ 386 KN+++ G V A +H S H +RPQ Sbjct: 341 WCKDEKNQVIITGPAVQGTIAHQLIHNPEPDIKIRPAQISFSAHADYLQTSSFIDSLRPQ 400 Query: 387 VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 ++ +HG ++L + I V Sbjct: 401 HVILVHGT---QHKCRDLQKKIEINFKDIVEKVW 431 >gi|145591929|ref|YP_001153931.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283697|gb|ABP51279.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 425 Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 90/437 (20%), Positives = 164/437 (37%), Gaps = 48/437 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE+G L ++ +++D GVSF D P VFP + Sbjct: 1 MRIKLLGGAGEVGRLAVLI----KTASSGLLLDYGVSFDAQDRP----VFP----LHVRP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRV--------Y 111 K+L A+F++HAH DH GAL L+ P+Y++P + L + K Sbjct: 49 KDLSAVFLSHAHLDHSGALPFLYISTRTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTLE 108 Query: 112 ERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E I G+ VDVG S+ + H IP + VI +V TGD+ D Sbjct: 109 EVKETMSSAIPLTYGEPVDVGNGISLTAYNAGH-IPGSALAVIEVEGRVVVFTGDFNTVD 167 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNAKGCV 228 +L D +L + ++ ++T A EK +++ ++++ G V Sbjct: 168 TNLL-RGADVYNL----PKNPDVVIMEATYASANHPPRDKLEKEFVQSVKEVLEGG-GSV 221 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS--VAIDVGIIKKDQLFLSDESF 286 L+ +F+ + R + I+ + G + + L R ++ V ++K L+ Sbjct: 222 LIPSFA--LGRAQEILLTLVKHGVEYPIYVDGLARQINQIVGRYPHLLKDPSLYKKALDV 279 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVA 341 + + + A A + +G + + K+ V S P N Sbjct: 280 SIEVPNTYVRKGAAEEPSVIIAPAGMIKGGAALFYFKKMAGNRKNGVFLPSFQAP-NTPG 338 Query: 342 IGHIKNRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLV 399 + VI +A S H +L+ + P+ ++ +H +P Sbjct: 339 FQILSKGYAIVDGAVIKVEARLEWFDFSAHAGRGELEAFIKRFSPETKIILVHTDPATAA 398 Query: 400 AHKELALQEGIACVPPV 416 + ++G + Sbjct: 399 PLVKKLAEDGYDNIYLP 415 >gi|158520277|ref|YP_001528147.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509103|gb|ABW66070.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 441 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 79/430 (18%), Positives = 156/430 (36%), Gaps = 51/430 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKD------DLPGV 51 + +P G IG + + +++D G+ F ++ + Sbjct: 1 MQIIPHKGTHMIGGTCVELR----AEGQGLLLDMGMPLVNPNGTEFDENTVKRPIEKLMA 56 Query: 52 DLVFPDITFIMKERK-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 D + P + + + + NL I +THAH DH+G + +P++A L+ A R+ Sbjct: 57 DDILPRVPGLYDKSECNLAGIVLTHAHRDHFGLSQFVKP--DIPIFAGQTTADLIGAIRL 114 Query: 111 Y--ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +++ I V VG F+I+S V+HS P MA+ + + + TGD + Sbjct: 115 FFPDQLDPARLTIIKAHWQPVTVGPFTIKSHPVDHSAPGAMAVEVEAAGKKVFFTGDLRA 174 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR---EGTCISEKGIKKNIYDIMKNAK 225 ++L + + A++ + ++ R E E +K+ + + +K+ Sbjct: 175 ----HGYKYRTFENLLKNPPKNVDAMLMEGSSLGRGPTEYAYPDESSVKEALINEIKDDP 230 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK----------RVVSVAIDVGIIK 275 VL+ S +V R+ S A+ GR++V+ + + D + Sbjct: 231 NLVLLFCSSQNVDRVVSACRAAQATGRELVMDYYTAYILYLLKNTSRNIPQFFWDEVRLL 290 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEP---------RSALAQLSRGEMRNVKLAEKD 326 + + + + G +P LA+ +R K D Sbjct: 291 SWPWHVHALEENGHKGFVITLNNKGGTVKPEEIFNNPDKFLVLAKPNRTLPTLTKGLGAD 350 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + G N + I + +H SGH DL R+ + + P Sbjct: 351 QITCMWSMWSGYLKDPEK--NFAAFLRTKNIPDGQIKHIHTSGHATIKDLGRLVKAVNPG 408 Query: 387 VLVAIHGEPL 396 +L+ IH Sbjct: 409 LLIPIHTFHP 418 >gi|307215032|gb|EFN89859.1| Integrator complex subunit 11 [Harpegnathos saltator] Length = 594 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 69/459 (15%), Positives = 139/459 (30%), Gaps = 59/459 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I + Sbjct: 3 DIKVTPLGAGQDVGRSCILVSMGGKN----IMLDCGMHMGFND----ERRFPDFSYISEG 54 Query: 65 R--KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ + I+H H DH GAL + P+Y + + R Sbjct: 55 AATDHIDCVIISHFHLDHCGALPYFTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVERK 114 Query: 121 ISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIVH 162 + + + V + +R +IV+ Sbjct: 115 GESNFFTSQMIKDCIKKVIAVTLHQSVMVDPDLEIKAYYAGHVLGAAMFWVRVGSQSIVY 174 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ + D LG I L+ +ST A + + + + Sbjct: 175 TGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYA-TTIRDSKRCRERDFLKKVHE 226 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKK 276 V ++ R + + + E + ++ + Sbjct: 227 CIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITWTN 286 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEKDT 327 ++ + ++ + + P + + A LS + E + Sbjct: 287 QKIKKTFVQRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNESNM 346 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKRMYQWI 383 VI + G + N V + A + S H + ++ Q+ Sbjct: 347 VIMPGFCVQG--TVGHKVLNGTRRIEFENRQIVEVKMAVEYMSFSAHADAKGIMQLIQYC 404 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+ ++ +HGE + KE QE NG+ Sbjct: 405 EPKNIILVHGEFAKMEYLKEKIKQEFGTNCYNPANGETC 443 >gi|94263370|ref|ZP_01287185.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] gi|93456325|gb|EAT06455.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] Length = 415 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 81/405 (20%), Positives = 151/405 (37%), Gaps = 39/405 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + +++D G+ P D P I + +L+ I Sbjct: 8 GSKQIGGSCVEIESCGQR----LLVDFGL--PLDAEENNTQYLPKINGLDGRDPSLLGIL 61 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG--DKVD 130 I+H H DH+G L + +PV A +L+A + + IP + +V Sbjct: 62 ISHPHLDHFGLLAHV--STKIPVGMGAAARRILKAAVPFLPGNWPIPSGGWNYQSGQRVT 119 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 +G F + V+HS + AL+I S I ++GD++ T + L + Sbjct: 120 IGPFYVTPFLVDHSAYDAYALLIESDGKRIFYSGDFRT----HGRKATLFERLTKNPPQN 175 Query: 191 ILALMCDSTNAMR---EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 I L + ++ R +EK I+ + I + +G L+ T ++ RI SI + Sbjct: 176 IDTLFLEGSSLGRLSDSRQFPTEKEIEDQLVQIFSSTEGLALIHTSGQNIDRIVSIFRAS 235 Query: 248 EQIGRKIVLLGSS---LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI-VIATGSQG 303 ++ GRK+++ + L+ + I L++ ++ S Sbjct: 236 KRTGRKLIIDLYTAAVLEATGNKNIPQSAWPDVALYVPQAQRIQVKENAWFDLLKRHSTN 295 Query: 304 EPR--------SALAQLSRGEMR-NVKLAE---KDTVIFSSRAIPGNEVAIGHIKNRLVE 351 L R R +++ E T I+S E + Sbjct: 296 RIFIEHLKQASRKSTLLFRPLHRFDIERGECLQGATYIYSQWEGY-WERGSYDMV----- 349 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + + +H SGH P +LK++ + +RP+ +V IH Sbjct: 350 KDWLLKHSIPKHNIHTSGHASPRELKKLVKALRPRKVVPIHSFFP 394 >gi|296131133|ref|YP_003638383.1| beta-lactamase domain protein [Cellulomonas flavigena DSM 20109] gi|296022948|gb|ADG76184.1| beta-lactamase domain protein [Cellulomonas flavigena DSM 20109] Length = 423 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 153/406 (37%), Gaps = 48/406 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDITFIMKERK-NL 68 G E+G + +++D G + +D++P PD+ + +L Sbjct: 14 GCHEVGGTCVEVE----AEGARLVLDVGRPLTAGREDEVP-----LPDVPGLADGADPSL 64 Query: 69 MAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + + I+H H DHYG L +H VPVYA A ++EA + + G Sbjct: 65 LGVLISHGHLDHYG----LLDQVHPSVPVYAGRAATAIIEAAQFFSPGPSLRTAGHLVDG 120 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + +G F + + V+HS + A+V+ + +++TGD + G + L A Sbjct: 121 ETFSIGPFRVTPLLVDHSAFDAYAVVLEAGGERLMYTGDLR-----GHGRKRTFERLLAS 175 Query: 187 GNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + AL+ + T+ E +E ++ ++ + +V + + +V R+ ++ Sbjct: 176 PPPDVDALLMEGTHVGSERHEPRTEARVELDLAATFRATTSLAVVASSAQNVDRLVTVYR 235 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAI---------DVGIIKKDQLFLSDESFGLYPR----E 292 A + GR +++ S+ + +G+ + + + G + R Sbjct: 236 AARRAGRTLLVDLYSVAVAGATGRSTIPQPGFPSLGVWLPRRQRVRVKESGEFHRTAAVR 295 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAE----KDTVIFSSRAIPGNEVAIGHIKNR 348 V P + + + T ++S + E + ++ Sbjct: 296 PYRVFTEELVAHPERYVVLGGQSVAHELLRDRALAVGGTFVWSMWSGYLAEPSGARLREA 355 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 GV V+ H SG DL+R+ ++P +V IH E Sbjct: 356 TRAAGVPVVEH------HTSGRASVRDLRRLVDAVKPGAVVPIHTE 395 >gi|307170840|gb|EFN62951.1| Integrator complex subunit 11 [Camponotus floridanus] Length = 595 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 78/462 (16%), Positives = 148/462 (32%), Gaps = 64/462 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCILVSMGGKN----IMLDCGMHMGFND----ERRFPDFSYIVAE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + P+Y + + R Sbjct: 55 GPATNYIDCVIISHFHLDHCGALPYFTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V V + IR +IV Sbjct: 115 KGESNFFTSQMIKDCMKKVVAVTLHQSVMVDPELEIKAYYAGHVLGAAMFWIRVGSQSIV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E + ++ + Sbjct: 228 -CIDKGGKVLIPVFA--LGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIKKTFVQRNMFEFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKRMY 380 + VI + G + N V + A + S H + ++ Sbjct: 345 ANMVIMPGFCVQG--TVGHKVLNGTRRIEFENRQIVEVKMAVEYMSFSAHADAKGIMQLI 402 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 Q+ P+ ++ +HGE + KE QE NG+ Sbjct: 403 QYCEPKNVMLVHGEFAKMEYLKEKIKQEFGVSCYNPANGETC 444 >gi|283782216|ref|YP_003372971.1| beta-lactamase domain-containing protein [Pirellula staleyi DSM 6068] gi|283440669|gb|ADB19111.1| beta-lactamase domain protein [Pirellula staleyi DSM 6068] Length = 431 Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 83/407 (20%), Positives = 156/407 (38%), Gaps = 34/407 (8%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---------------DDLPGVDLVFPD 57 G EIG + ++ I++D G+ ++ + V P Sbjct: 8 GTKEIGGSCVEI----ATTSTRIVLDLGLPIVDANREPFDSRLALTKSNEELRDEKVIPA 63 Query: 58 ITFIMKERK-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFA--IGLLEAKRVYERV 114 I + E AI ++HAH DH G LH S VP+Y + + L ++ Sbjct: 64 IAGLFDESHAPPDAILLSHAHLDHAGLLH--RSRTEVPIYTTAGTSKMMLAAGVFAGQKS 121 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + +G FSI + V+HSI ++A +I I++TGD++ + Sbjct: 122 LDRNRFRPVTSQQTYRIGDFSITPLSVDHSIFGSVAYLIEGDGKAILYTGDFR-NHGRKP 180 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 G + D + + +L + RE SE ++ I ++++A VL + Sbjct: 181 GMMRDLLAFVRGKSIDVLIVEGTHFGGERE-QGRSEFELEVEIRSLIESAPALVLACFSA 239 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 + R+ +I ++ GR +V+ + + + V K + + F + ++ Sbjct: 240 LDIDRLVTIYKASQAAGRTLVIDAYAAFVLHLLGSSVSTPKPTKEYGIRVFFNAHFEKRN 299 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAE--------KDTVIFSSRAIPGNEVAIGHIK 346 +V E + L+++ R E R V + ++ R + G Sbjct: 300 LVEIRKRFEEVQIELSEVLRDENRYVMMFRPSMLASDFGGSLPKPCRCLYGYWKGYLAKP 359 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + Q V A P HVSGH Y D+ + I+P+ ++ IH Sbjct: 360 DWQELQNVIEGAHGDFIPAHVSGHAYIRDIIALVAAIQPRHILPIHT 406 >gi|261884753|ref|ZP_06008792.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 181 Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 105/175 (60%), Gaps = 2/175 (1%) Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ-LFLSDESFGL 288 ++TFSS++ R+ I+ + GRK+ ++G S++R AI++G + D+ +F+ Sbjct: 1 MSTFSSNIHRVYQAIERGVKHGRKVCVIGRSMERNFWTAIELGYVNLDKNIFIDAIEVSE 60 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 YP +++++ TGSQGE SAL +++ E + +K+ D +I SS+AIP NE ++ + N Sbjct: 61 YPDNEVLIVPTGSQGETMSALYRMATDEHKYIKIKPTDQIIISSKAIPVNETSVSTVLNY 120 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 L++ G V +D +HVSGH + K M + ++ + + +HGE H+V HKE Sbjct: 121 LLKSGASVAHQDF-SEIHVSGHAAQEEQKLMIRLVKLKFFLPVHGEYNHIVRHKE 174 >gi|307594462|ref|YP_003900779.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa DSM 14429] gi|307549663|gb|ADN49728.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa DSM 14429] Length = 433 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 80/435 (18%), Positives = 155/435 (35%), Gaps = 39/435 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L+ LGG GE+G +S + + D GV+F ++D P V P Sbjct: 3 DLMIKVLGGGGEVGR--MAIFVKEANSERGFLFDYGVNFDENDRP----VMPG----HVR 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISF 123 +++MA+F++HAH DH GAL L+ PVYA+P + L + ++S Sbjct: 53 PRDIMAVFLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYED 112 Query: 124 QAGDKVDVGAFSIESVR-------------VNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + V A + +P +M ++ ++ TGD+ L Sbjct: 113 EEIKAVLDHAIPVTYGEDVDISKDVKATIINAGHVPGSMLTLLEINGARVLFTGDFNLSQ 172 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 +L D +++ + ++ + T E+ ++ I I + +G V Sbjct: 173 SNLL-RGADINNV----PRDVDVVIMEGTYVTNTHP-PREEVEREFIRVIKETIEGGGSV 226 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS--VAIDVGIIKKDQLFLSDESFGL 288 ++ R + I+ + G ++ L R+ + VA + +L+L L Sbjct: 227 LIPVLTIGRAQEILITLYKNGIDYPIIIDGLARIANQIVAKYPHYLANPELYLKAVENSL 286 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEM-----RNVKLAEKDTVIFSSRAIPGNEVAIG 343 + + + A + +G + + ++ +I S P Sbjct: 287 EVTTDYQRKSLTKEPVIIVSPAGMLKGGAAVYYLKKLGRDRRNAIILPSYQAPDTPGFEL 346 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLVAH- 401 + R VI E S H +L+ P ++ +H E + + Sbjct: 347 LTRGRTFIDKSEVILEAKLYWFDFSSHSGRAELEAFINHFSPDTKVLLVHTEAIKALQFL 406 Query: 402 KELALQEGIACVPPV 416 L ++ GI V Sbjct: 407 DRLKVKYGIDNVHVP 421 >gi|328776642|ref|XP_003249190.1| PREDICTED: integrator complex subunit 11-like [Apis mellifera] Length = 603 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 71/460 (15%), Positives = 139/460 (30%), Gaps = 60/460 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKVTPLGAGQDVGRSCILVSMGGKN----IMLDCGMHMGFND----ERRFPDFSYIIPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + P+Y + + R Sbjct: 55 GPATNYIDCVIISHFHLDHCGALPYFTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR +IV Sbjct: 115 KGESNFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSIV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + D LG I L+ +ST A + + + Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYA-TTIRDSKRCRERDFLKKVH 226 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + V ++ R + + + E + ++ + Sbjct: 227 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITWT 286 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEKD 326 ++ + ++ + + P + + A LS + E + Sbjct: 287 NQKIKKTFVQRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNEAN 346 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKRMYQW 382 VI + G + N V + A + S H + ++ Q+ Sbjct: 347 MVIMPGFCVQG--TVGHKVLNGSRRIEFENRQIVEVKMAVEYMSFSAHADAKGIMQLIQY 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+ ++ +HGE + KE QE NG+ Sbjct: 405 CEPKNVMLVHGEFAKMEFLKEKIKQEFGTNCYNPANGETC 444 >gi|268323698|emb|CBH37286.1| conserved hypothetical protein, RNA-metabolising metallo-beta-lactamase family [uncultured archaeon] Length = 628 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 90/469 (19%), Positives = 168/469 (35%), Gaps = 81/469 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++E L LGG E+G N + + I+IDCGVS + +P L P++T Sbjct: 176 IEDEWLRITALGGCREVGRNAFML----STPETRILIDCGVSVGSEGMPY--LYVPEVTP 229 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAK---------RV 110 I N+ A+ ITHAH DH G + L+ + P+Y + L+ R Sbjct: 230 I----SNIDAVVITHAHLDHSGLVPLLYLYGYDGPIYITQPTRDLMALLLLDYLEVSARE 285 Query: 111 YERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPV--GN 159 +++ K I + + + H I + N Sbjct: 286 GKKIPYKSALIRDAIRHTIPLKYGDVTDISPDVKLTLYNAGH-ILGSSIAYFHVGNGLYN 344 Query: 160 IVHTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + TGD K + + + L AL+ +ST S + +KN+ Sbjct: 345 VAFTGDMKYERTFLFDPAFNSFTRLE--------ALVMESTYGGMHDFQPSRREAEKNLK 396 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK-----------RV 264 + ++ G V++ F+ V R + ++ E + ++ + + Sbjct: 397 EEIERTLKQGGKVIIPAFA--VGRSQEVMIALEGMQLEVPVYLDGMIWEATAIHSAYPEY 454 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRN 319 ++ + I + FLSD + E+ I G + + + + G ++ Sbjct: 455 LNKNLKNSIYQGANPFLSDIFVQVDDAEKRREIIEGDESSIILSTSGMLNGGPVLEYLKG 514 Query: 320 VKLAEKDTVIFS---------SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + E++T+IF R G E ++V +++ + SGH Sbjct: 515 LAGDERNTLIFVGYQAEGTLGRRIQKGWEEIQLSADGKMVNIKMKIGTATIDG---FSGH 571 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPLHLVA-----HKELALQEGIAC 412 N L + IR P ++ +HGE +A HK+L + Sbjct: 572 SDRNQLLEYVKRIRPLPSKVMCMHGESNKCIALASGIHKKLNIDTSAPM 620 >gi|156546030|ref|XP_001608037.1| PREDICTED: similar to cleavage and polyadenylation specificity factor [Nasonia vitripennis] Length = 595 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 75/468 (16%), Positives = 148/468 (31%), Gaps = 64/468 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKVTPLGAGQDVGRSCILVSVGGKN----IMLDCGMHMGFND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + P+Y + + R Sbjct: 55 GPATNYIDCVIISHFHLDHCGALPYFTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR +IV Sbjct: 115 KGESNFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSIV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E + ++ + Sbjct: 228 -CIDKGGKVLIPVFA--LGRAQELCILLETYWERMNLKAPVYFALGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIKKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKRMY 380 + VI + G + N V + + S H + ++ Sbjct: 345 ANMVIMPGFCVQG--TVGHKVLNGAKRIEFENRQIVEVKMTVEYMSFSAHADAKGIMQLI 402 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDP 428 Q+ P+ ++ +HGE + K+ QE NG+ + Sbjct: 403 QYCEPKNVMLVHGEFAKMEYLKDKIKQEFGINCYNPANGETCIITTKS 450 >gi|94266502|ref|ZP_01290192.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] gi|93452889|gb|EAT03403.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] Length = 415 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 81/405 (20%), Positives = 151/405 (37%), Gaps = 39/405 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + +++D G+ P D P I + +L+ I Sbjct: 8 GSKQIGGSCVEIESCGQR----LLVDFGL--PLDAEENNTQYLPKINGLDGCDPSLLGIL 61 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG--DKVD 130 I+H H DH+G L + +PV A +L+A + + IP + +V Sbjct: 62 ISHPHLDHFGLLAHV--STKIPVGMGAAARRILKAAVPFLPGNWPIPSGGWNYQSGQRVT 119 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 +G F + V+HS + AL+I S I ++GD++ T + L + Sbjct: 120 IGPFYVTPFLVDHSAYDAYALLIESGGKRIFYSGDFRT----HGRKATLFERLTKNPPQN 175 Query: 191 ILALMCDSTNAMR---EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 I L + ++ R +EK I+ + I + +G L+ T ++ RI SI + Sbjct: 176 IDTLFLEGSSLGRLSDSRQFPTEKEIEYQLVQIFSSTEGLALIHTSGQNIDRIVSIFRAS 235 Query: 248 EQIGRKIVLLGSS---LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI-VIATGSQG 303 ++ GRK+++ + L+ + I L++ ++ S Sbjct: 236 KRTGRKLIIDLYTAAVLEATGNKNIPQSAWPDVALYVPQAQRIQVKENAWFDLLKRHSTN 295 Query: 304 EPR--------SALAQLSRGEMR-NVKLAE---KDTVIFSSRAIPGNEVAIGHIKNRLVE 351 L R R +++ E T I+S E + Sbjct: 296 RIFIEHLKQASRKSTLLFRPLHRFDIERGECLQGATYIYSQWEGY-WERGSYDMV----- 349 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + + +H SGH P +LK++ + +RP+ +V IH Sbjct: 350 KDWLLKHSIPKHNIHTSGHASPRELKKLVKALRPRKVVPIHSFFP 394 >gi|197099184|ref|NP_001124760.1| integrator complex subunit 11 [Pongo abelii] gi|55725797|emb|CAH89679.1| hypothetical protein [Pongo abelii] Length = 655 Score = 126 bits (317), Expect = 8e-27, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFTDNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFQKQKIEQELRVSCYMPANG 441 >gi|253742053|gb|EES98907.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia intestinalis ATCC 50581] Length = 757 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 78/490 (15%), Positives = 145/490 (29%), Gaps = 70/490 (14%) Query: 1 MK-NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----F 55 MK N+ + PLG E+G + + Y IM+DCG+ + D V Sbjct: 23 MKANDHVKVTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSET--RDYVAIQAL 80 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWS--------------FLHVPVYASPFA 101 P + NL I ITH H DH AL L PVY + Sbjct: 81 PFFD-LEDYVANLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPT 139 Query: 102 IGLLEA---------KR---VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + + K K + V S ++ H I Sbjct: 140 LKIFKESVADVISQTKLYTHEDVEFMAKNTRLLTSFYQTERVSGVSFTAMPAGHVI-GAA 198 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 I + ++TGD+ + + + L+ +ST Sbjct: 199 MFHISIDNFHALYTGDFSCEPEDRHLQP------ATFPQVRLDLLIIESTYGTIRQKERM 252 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA- 268 + + I I+ K V S+ R++ ++ I ++ R+ + RV Sbjct: 253 TRE-RDFIDLIVSTVKKDGCVLLPVFSIGRVQELLCILQEYWRE---HEQEMARVTIYYV 308 Query: 269 ------------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG--------EPRSA 308 D G ++ LSD G + P Sbjct: 309 SAIADNARQLYSKDKGFLRHGDTGLSDIQTGKRKDRIIYTKTRPKNPKKPYVMFCTPGML 368 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + +S+ + + + ++ + A + + + G A+ + S Sbjct: 369 QSGVSKEMYNELCGSPDNLLLVTGYATQ--DTLLYKLLEGK-PPGAYADAKMRIEELSFS 425 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPVRNGKMLRLFPD 427 H N + + RP+ +V IHG + + K +A + ++ + + Sbjct: 426 AHSDYNQTLDVLRKTRPRNVVFIHGSEKSISSLKRTIANETRVSFSEGDKEADKEEISFH 485 Query: 428 PIEIIDEVVH 437 + V Sbjct: 486 YPRNGETVTF 495 >gi|169837064|ref|ZP_02870252.1| peptide ABC transporter, periplasmic peptide-binding protein [candidate division TM7 single-cell isolate TM7a] Length = 184 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 75/177 (42%), Gaps = 4/177 (2%) Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVV 436 M + I+P+ + +HGE H+ HKE A+ G+ + + +G + L ++ + V Sbjct: 6 MLRLIKPKFFLPVHGEYNHIAKHKETAIACGVDERNIYLMSDGDQMELCQKYLKRVKTVK 65 Query: 437 HGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHY-NIFGVPEIVDIGIPAYDG 495 G D + + +D + R+ L+ G + + + + + P ++ G+ A Sbjct: 66 TGKVFIDNQINKQISDDVVIDRQNLAEAGVVMIIAQISRNGAKLINKPRVISYGLVANKN 125 Query: 496 DGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFI 552 D K + + + ++ + KD ++L + +R + + K P + I Sbjct: 126 DHE-FSKEMEGVLEQFLSNVKEELLKDGRMLEGQVRQVIRKHIFRKIKKYPTIVPII 181 >gi|19074699|ref|NP_586205.1| similarity to HYPOTHETICAL PROTEIN Y162_METJA [Encephalitozoon cuniculi GB-M1] gi|19069341|emb|CAD25809.1| similarity to HYPOTHETICAL PROTEIN Y162_METJA [Encephalitozoon cuniculi GB-M1] Length = 730 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 83/515 (16%), Positives = 165/515 (32%), Gaps = 87/515 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDIT 59 NE++ +PLG E+G + + G + IM+DCGV + P +DLV D++ Sbjct: 91 NEKIKIMPLGAGNEVGRSCVIVECGGRT----IMLDCGVHPAYTGMASLPFLDLV--DLS 144 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER---- 113 + A+FITH H DH AL L VY + +L+ Sbjct: 145 -------KIDAVFITHFHLDHAAALPFLTEKTSFRGKVYMTHPTKAILKWLLNDYIRIIN 197 Query: 114 -------------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 V I +V+V ++++ H + ++ I Sbjct: 198 ASSDTDFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGH-VLGAAMFLVEIEKSKI 256 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD+ ++D L I AL+ +ST ++ +E+ + + Sbjct: 257 LYTGDFSREEDRHL-------KAAESPGCKIDALITESTYGVQCHLPRAERE-GRFTSIV 308 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 + ++ R + ++ I E+ +SL+++ + ++ Sbjct: 309 QNVVQRGGRCLLPVFALGRAQELLLILEEH----WGSNTSLQKIPIYYASALAKRCMGVY 364 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN---VKLAEKDTVIFSSRAIPG 337 + ++L ++ + L + + + + SR + Sbjct: 365 QTYIGMMNERIQKLSLVRNPFAFKYVKNLKGIDSFDDEGPCVIMASPGMLQSGLSRDL-- 422 Query: 338 NEVAIGHIKNRLVEQGVRV-----------------------IAEDAECPVHVSGHPYPN 374 E KN ++ G V + + S H Sbjct: 423 FERWCSDSKNAVIIPGYCVDGTLAKEILSEPKEIEAMNGKKLRLNMSVEYISFSAHVDFT 482 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV--------RNGKMLRLFP 426 + + +P+ L +HGE + K + Q + Sbjct: 483 QNSQFIEECQPKYLFFVHGEMNEMQRLKNVIQQRNEKRGVEMVLYTLRNGEEAGFDLAKD 542 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQL 461 + +I V +G +IG D+ I KR +L Sbjct: 543 NEAKIFTGVEGEF---EGIIIGTEDDIRIYKRDEL 574 >gi|66472504|ref|NP_001018457.1| integrator complex subunit 11 [Danio rerio] gi|82192739|sp|Q503E1|INT11_DANRE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein gi|63102425|gb|AAH95364.1| Zgc:110671 [Danio rerio] Length = 598 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 73/491 (14%), Positives = 145/491 (29%), Gaps = 90/491 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D D FPD ++I + Sbjct: 3 DIKVTPLGAGQDVGRSCILVSIGGKN----IMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L + I+H H DH GAL + P+Y + + R Sbjct: 55 GRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V +N + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHVLGAAMVQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDILISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRSYADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAI-------------GHIKNRLVEQGVRVIAEDAEC----PVHVSGHPY 372 + GNE + I N + + A + S H Sbjct: 335 QIFKKWAGNEKNMVIMPGYCVQGTVGHKILNGQKKLEMEGRATLDVKLQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEII 432 + ++ + P+ ++ +HGE A + + + P E Sbjct: 395 AKGIMQLIRMAEPRNMLLVHGE----------AKKMEFLKDKIEQEFSISCFMPANGETT 444 Query: 433 DEVVHGLFLKD 443 V + D Sbjct: 445 TIVTNPSVPVD 455 >gi|308162204|gb|EFO64613.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia P15] Length = 737 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 75/490 (15%), Positives = 143/490 (29%), Gaps = 70/490 (14%) Query: 1 MK-NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----F 55 MK N+ + PLG E+G + + Y IM+DCG+ + D V Sbjct: 1 MKANDHVKLTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSET--RDYVAIQAL 58 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWS--------------FLHVPVYASPFA 101 P + L I ITH H DH AL L P+Y + Sbjct: 59 PFFD-LEDYVSTLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPIYMTAPT 117 Query: 102 IGLLEA---------KRVYERVSKKIPCISF---QAGDKVDVGAFSIESVRVNHSIPETM 149 + + + K + + V S ++ H I Sbjct: 118 LKIFKESVTDVISQTKLYTHEDVDFMAKNTKLLTSFYQTERVSGISFTAMPAGHVI-GAA 176 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 I + ++TGD+ + + + L+ +ST Sbjct: 177 MFHISIDNFHALYTGDFSCEPEDRHLQP------ATFPQVKLDLLIIESTYGTIRQKERM 230 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA- 268 + + I I+ K V S+ R++ ++ I ++ R+ + R+ Sbjct: 231 TRE-RDFIDLIVSTVKKDGCVLLPVFSIGRVQELLCILQEYWRE---HEQEMARITIYYV 286 Query: 269 ------------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG--------EPRSA 308 D G ++ LSD G + + P Sbjct: 287 SAIADNARQLYSKDKGFLRHGDTGLSDIQTGKRKDKIIYTKTRPKNPKKPYVMFCTPGML 346 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + +S+ + + + ++ + A + + + G E + S Sbjct: 347 QSGVSKEMYNELCGSPDNLLLVTGYATQ--DTLLYKLLEGKPPGGYADAKMRIE-ELSFS 403 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPVRNGKMLRLFPD 427 H N + + RP+ +V IHG + + K +A + I + + Sbjct: 404 AHSDYNQTLDVLRKTRPRNVVFIHGSEKSISSLKRTIANETRINFSEGGKEADKEEISFH 463 Query: 428 PIEIIDEVVH 437 + V Sbjct: 464 YPRNGETVTF 473 >gi|61098197|ref|NP_001012854.1| integrator complex subunit 11 [Gallus gallus] gi|75571225|sp|Q5ZIH0|INT11_CHICK RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein gi|53135966|emb|CAG32473.1| hypothetical protein RCJMB04_26e19 [Gallus gallus] Length = 600 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 70/467 (14%), Positives = 141/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGYND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQILEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ + P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLIRQAEPRNVLLVHGEAKKMEFLKQKIEQEFHVNCYMPANG 441 >gi|326932364|ref|XP_003212289.1| PREDICTED: integrator complex subunit 11-like [Meleagris gallopavo] Length = 600 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 70/467 (14%), Positives = 141/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGYND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQILEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ + P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLIRQAEPRNVLLVHGEAKKMEFLKQKIEQEFHVNCYMPANG 441 >gi|327310525|ref|YP_004337422.1| mRNA 3'-end processing factor [Thermoproteus uzoniensis 768-20] gi|326947004|gb|AEA12110.1| mRNA 3'-end processing factor, putative [Thermoproteus uzoniensis 768-20] Length = 424 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 155/437 (35%), Gaps = 48/437 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE+G L + S ++ D GV+F P VFP+ Sbjct: 1 MRVKFLGGAGEVGRAAVLVKTATGS----VLFDYGVNFDSQGRP----VFPE----HVRP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 K+L+A+ ++HAH DH GAL L+ + +P+YA+P + L + K + Sbjct: 49 KDLVAVVLSHAHLDHSGALPSLYVSVKIPIYATPLTMELSDVMYTDMIKLSGYYLPYTHE 108 Query: 120 CISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + + + ++ H +P + V+ + +V TGD+ L D Sbjct: 109 EVKATMESAIPLTYGEPVELAPDVTLTVYNAGH-VPGSAISVLEAEGKTVVFTGDFNLRD 167 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 A+L D +L + ++ + A E+ + ++++ G VL+ Sbjct: 168 TALL-KGADVYNLPREPD--VVVMEATYAAADHPPRQDLERDFVNTVREVVEGG-GTVLI 223 Query: 231 TTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG-L 288 +F+ + R + I+ + I + G + + V ++ L+ Sbjct: 224 PSFA--LGRAQEILLTLVKHEVGPIYVDGLARQVNTIVGKYPHLLNDYDLYRKALEVAVE 281 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSS---RAIPGNEV 340 P + A G + + A + +G + + ++ +I S PG EV Sbjct: 282 IPSAYVRKRAVGQEPSIIISPAGMLKGGASLYYFKKLAGDSRNAIILPSFQAPDTPGFEV 341 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLV 399 G + + S H ++L + Q +V H EP + Sbjct: 342 LSRG---EAFVDGTTIKVKARVEWFDFSAHSGRSELVEFIERFGAQSRIVLFHTEPSSAL 398 Query: 400 AHKELALQEGIACVPPV 416 + G + Sbjct: 399 QFAKWMQARGRDNIYVP 415 >gi|56204955|emb|CAI23177.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 627 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 30 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 81 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 82 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 141 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 142 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 201 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 202 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 254 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 255 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 311 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 312 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 361 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 362 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 421 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 422 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPANG 468 >gi|75764090|ref|ZP_00743685.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488420|gb|EAO52041.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 128 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 2/128 (1%) Query: 429 IEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVD 487 + G DG IG + + R+QLS G L + + + I P+I+ Sbjct: 2 AIQSRRIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDGEIISGPDIIS 61 Query: 488 IGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPL 547 G Y D + + L K + T+ +L + +L+ + AL + +KP+ Sbjct: 62 RGF-VYVRDSEEFLRELNKLAVITINNLKKENVNSWGILKREVREALGRYIYTNTKRKPM 120 Query: 548 VTVFINKI 555 + I ++ Sbjct: 121 ILPIIIEV 128 >gi|157107341|ref|XP_001649735.1| cleavage and polyadenylation specificity factor [Aedes aegypti] gi|108879612|gb|EAT43837.1| cleavage and polyadenylation specificity factor [Aedes aegypti] Length = 613 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 79/463 (17%), Positives = 155/463 (33%), Gaps = 60/463 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD +FI+ E Sbjct: 3 DIKITPLGAGQDVGRSCILLSMGGKN----IMLDCGMHMGYND----ERRFPDFSFIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITNHIDCVIISHFHLDHCGALPYMTEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCKPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFAVGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + G P + + A LS + E Sbjct: 285 WTNQKIRKTFVQRNMFDFKHIKPFDKGYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + + + S H + ++ Q+ Sbjct: 345 NNMVIMPGYCVQGTVGHKILGGAKKVEFENRQVVEVKMSVEYMSFSAHADAKGIMQLIQY 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 P+ ++ +HGE + + KE +E NG+ + Sbjct: 405 CEPKNVMLVHGEAVKMEFLKEKIKEEFHIECYTPANGETCVIN 447 >gi|224048711|ref|XP_002196255.1| PREDICTED: similar to cleavage and polyadenylation specific factor 3, 73kDa [Taeniopygia guttata] Length = 994 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 318 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 371 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV------ 110 + + I+H H DH GAL + + + Sbjct: 372 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 424 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + + I + +V H + +I Sbjct: 425 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 483 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 484 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 536 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 537 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 593 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 594 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 653 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 654 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 713 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 714 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 757 >gi|56204952|emb|CAI23174.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 598 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 144/450 (32%), Gaps = 68/450 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 23 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 74 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 75 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 134 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 135 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 187 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 188 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 239 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 240 LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFE 299 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI- 345 + + P + V S R GNE + + Sbjct: 300 FKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMP 349 Query: 346 ---------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + +L +G +V+ + + S H + ++ P+ ++ Sbjct: 350 GYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVL 409 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +HGE + K+ QE NG Sbjct: 410 LVHGEAKKMEFLKQKIEQELRVNCYMPANG 439 >gi|256084683|ref|XP_002578556.1| cleavage and polyadenylation specificity factor [Schistosoma mansoni] gi|238663934|emb|CAZ34794.1| cleavage and polyadenylation specificity factor, putative [Schistosoma mansoni] Length = 619 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 65/436 (14%), Positives = 139/436 (31%), Gaps = 61/436 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE- 64 + +PLG ++G + L G + IM DCG+ +D D FPD T+I + Sbjct: 4 IRVIPLGAGQDVGRSCILVTLGGKN----IMFDCGMHMGYND----DRKFPDFTYITDKG 55 Query: 65 --RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG----LLEAKRVYERVSK 116 + L + I+H H DH GAL + P+Y + LLE R + Sbjct: 56 GLNEYLDCVIISHFHLDHCGALPYMTEVIGYDGPIYMTHPTKAICPILLEDYRKINVERR 115 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVN--------------HSIPETMALVIRSPVGNIVH 162 + + + ++R ++++ Sbjct: 116 GDQNFFTSDMIYRCMTKVRCVYIHQTVKVDDELEIQAFYAGHVLGAAMFLVRVGTNSVLY 175 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ + D LG + L+ +ST A ++ + I Sbjct: 176 TGDYNMTPDRHLGA-------AWVSRCRPDLLITESTYA-TTIRDSKRTREREFLEKIHA 227 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSL---KRVVSVAIDVGIIK 275 + V ++ R + + + E + + S+ ++ Sbjct: 228 RVEAGGKVLIPVFALGRAQELCILLETYWERMNISVPIY-FSMGMAEKANEYYKLFISWT 286 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKD 326 ++ + ++ + + + G+ P + + G R E++ Sbjct: 287 NQKIKETFVKRNMFDFKHIKPLGQGTVDNPGPMVVFATPGMLHAGQSLHIFRKWASDERN 346 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVR---VIAEDAECPVHVSGHPYPNDLKRMYQWI 383 V+ + G I N + + + A + S H + ++ Sbjct: 347 MVVIPGYCVAG--TVGYKILNGVRRLEFDKQVLEVKMAVEYLSFSAHADARGIMQLISHC 404 Query: 384 RPQVLVAIHGEPLHLV 399 +P+ ++ +HGE + + Sbjct: 405 QPKHVMLVHGEAIKMD 420 >gi|327288530|ref|XP_003228979.1| PREDICTED: integrator complex subunit 11-like [Anolis carolinensis] Length = 600 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 72/476 (15%), Positives = 152/476 (31%), Gaps = 80/476 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGYND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCLIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGCESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI---VLLGSSL---KRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + E ++ + S+ ++ Sbjct: 228 TIERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSMGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 + GNE + + + +E + + + S H Sbjct: 335 QIFKKWAGNEKNMVIMPGYCVQGTVGHKILGGQRKLEMEGRQILEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDP 428 + ++ + P+ ++ +HGE + K+ QE NG+ + +F +P Sbjct: 395 AKGIMQLIRQAEPRNVLLVHGEAKKMEFLKQKIEQEFHVNCHMPANGETVTVFTNP 450 >gi|91086147|ref|XP_969343.1| PREDICTED: similar to CG1972 CG1972-PA [Tribolium castaneum] gi|270009886|gb|EFA06334.1| hypothetical protein TcasGA2_TC009205 [Tribolium castaneum] Length = 595 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 71/460 (15%), Positives = 139/460 (30%), Gaps = 60/460 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I +E Sbjct: 3 DIKITPLGAGQDVGRSCILLTMGGKN----IMLDCGMHMGYND----ERRFPDFSYISQE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + P+Y + + R Sbjct: 55 GPLTSYIDCVIISHFHLDHCGALPYMSEMVGYSGPIYMTHPTKAIAPILLEDMRKVSVEK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR ++V Sbjct: 115 KGDQNFFTSQMIKDCMKKVIAVTLHQSLMVDNEIEIKAYYAGHVLGAAMFWIRVGAQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + D LG I L+ +ST A + + + Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYA-TTIRDSKRCRERDFLKKVH 226 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + V ++ R + + + E + ++ + Sbjct: 227 ECMDRGGKVLIPVFALGRAQELCILLETYWERMNLKAPVYFALGLTEKANNYYKMFITWT 286 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEKD 326 ++ + ++ + + P + A LS + E + Sbjct: 287 NQKIRKTFVQRNMFDFKHIKPFDRSYIDNPGPMVVFATPGMLHAGLSLQIFKKWAPNENN 346 Query: 327 TVIFSSRAIPGNEVAIGHIKNR----LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 VI + G I N E V + + + S H + ++ Q Sbjct: 347 MVIMPGFCVQG--TVGHKILNGAKRVEFENKQIVEVKMSVEYMSFSAHADAKGIMQLIQH 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+ ++ +HGE + K+ LQE NG+ Sbjct: 405 CEPRNVMLVHGEAEKMEFLKQKILQEFSINCYNPANGETC 444 >gi|308492421|ref|XP_003108401.1| CRE-CPSF-3 protein [Caenorhabditis remanei] gi|308249249|gb|EFO93201.1| CRE-CPSF-3 protein [Caenorhabditis remanei] Length = 712 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 81/455 (17%), Positives = 146/455 (32%), Gaps = 59/455 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ L F PLG E+G + L Y K +M+DCGV L GVD P + F+ Sbjct: 7 NSDSLSFTPLGSGQEVGRSCHLLEY----KGKRVMLDCGV---HPGLHGVDA-LPFVDFV 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 +N+ + ITH H DH GAL L + + + Sbjct: 59 E--IENIDLLLITHFHLDHCGALPWLLQKTAFRGKCFMTHATKAIYRMLLGDYVRISKYG 116 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + K + I ++ +V H + +I + Sbjct: 117 GADRNQLYTEDDLEKSMAKIETIDFREQKEVNGIRFWPYVAGH-VLGACQFMIEIAGVRV 175 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIY 218 ++TGD+ +D L I L+ +ST + S EK + ++ Sbjct: 176 LYTGDFSCLEDRHLCA-------AEIPPITPQVLITESTYGTQTHEERSVREKRFTQMVH 228 Query: 219 DIMKNAKGCVL----VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGI 273 DI+ C++ + + + + +++ V SSL + +SV Sbjct: 229 DIVTRGGRCLIPAFAIGPAQELMLILDEYWESHQELHDIPVYYASSLAKKCMSVYQTFVN 288 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 ++ + + + + Q E P + SR N Sbjct: 289 GMNSRIQKQIAVKNPFIFKHVSTLRGMDQFEDAGPCVVLATPGMLQSGFSRELFENWCSD 348 Query: 324 EKDTVIFSSRAIPGNEVAIGHI--KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ I + + G + + G ++ V S H N + Sbjct: 349 SKNGCIIAGYCVEGTLARHILTEPEEIVSLSGEKLPMRMQVGYVSFSAHTDFNQTSNFVK 408 Query: 382 WIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPP 415 ++P LV +HGE + Q A +P Sbjct: 409 ALKPPHLVLVHGELHEMSRLKAGIERQFQDANIPI 443 >gi|224079882|ref|XP_002197797.1| PREDICTED: cleavage and polyadenylation specific factor 3-like [Taeniopygia guttata] Length = 600 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 68/466 (14%), Positives = 142/466 (30%), Gaps = 81/466 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGYND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y S + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMSHPTKAICPILLEDYRKITVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQILEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEP-LHLVAHKELALQEGIACVPPVR 417 + ++ + P+ ++ +HGE +++ + ++C P Sbjct: 395 AKGIMQLIRQAEPRNVLLVHGEAKKMEFLRQKIEQEFHVSCFMPAN 440 >gi|159111399|ref|XP_001705931.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] gi|157434022|gb|EDO78257.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] Length = 757 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 76/490 (15%), Positives = 141/490 (28%), Gaps = 70/490 (14%) Query: 1 MK-NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----F 55 MK N+ + PLG E+G + + Y IM+DCG+ + D V Sbjct: 23 MKPNDHVKLTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSET--RDYVAIQAL 80 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWS--------------FLHVPVYASPFA 101 P + L I ITH H DH AL L PVY + Sbjct: 81 PFFD-LEDYVSTLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPT 139 Query: 102 IGLLEA---------KR---VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + + K K + V S ++ H I Sbjct: 140 LKIFKESVTDVISQTKLYTHEDVEFMAKNTKLLTSFYQTERVNGISFTAMPAGHVI-GAA 198 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 I + ++TGD+ + + + L+ +ST Sbjct: 199 MFHISIDNFHALYTGDFSCEPEDRHLQP------ATFPQVKLDLLIIESTYGTIRQKERM 252 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA- 268 + + I I+ K V S+ R++ ++ I ++ R+ + RV Sbjct: 253 TRE-RDFIDLIVSTVKKDGCVLLPVFSIGRVQELLCILQEYWRE---HEQEMARVTIYYV 308 Query: 269 ------------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG--------EPRSA 308 D G ++ LSD G + P Sbjct: 309 SAIADNARQLYSKDKGFLRHGDTGLSDIQTGKRKDRIIYTKTRPKNPKKPYVMFCTPGML 368 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + +S+ + + + ++ + A + + + G E + S Sbjct: 369 QSGVSKEMYNELCGSPDNLLLVTGYATQ--DTLLYKLLEGKPPGGYADAKMRIE-ELSFS 425 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPVRNGKMLRLFPD 427 H N + + RP+ + IHG + + K +A + + + + Sbjct: 426 AHSDYNQTLDVLRKTRPRNVAFIHGSEKSISSLKRTIANETRVNFSEGGKEADKEEISFH 485 Query: 428 PIEIIDEVVH 437 + V Sbjct: 486 YPRNGETVTF 495 >gi|170052069|ref|XP_001862054.1| cleavage and polyadenylation specificity factor subunit 3 [Culex quinquefasciatus] gi|167873079|gb|EDS36462.1| cleavage and polyadenylation specificity factor subunit 3 [Culex quinquefasciatus] Length = 615 Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats. Identities = 78/460 (16%), Positives = 154/460 (33%), Gaps = 60/460 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD +FI+ E Sbjct: 3 DIKITPLGAGQDVGRSCILLSMGGKN----IMLDCGMHMGYND----ERRFPDFSFIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITNHIDCVIISHFHLDHCGALPYMTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V V + IR ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVVAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCKPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E + ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPVYFAVGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + G P + + A LS + E Sbjct: 285 WTNQKIRKTFVQRNMFDFKHIKPFDKGYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + + + S H + ++ Q+ Sbjct: 345 NNMVIMPGYCVQGTVGHKILGGAKKVEFENRQVVEVKMSVEYMSFSAHADAKGIMQLIQY 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+ ++ +HGE + + K+ +E NG+ Sbjct: 405 CEPKNVMLVHGEAVKMEFLKDKIREEFHIDCFTPANGETC 444 >gi|170060909|ref|XP_001866010.1| cleavage and polyadenylation specificity factor [Culex quinquefasciatus] gi|167879247|gb|EDS42630.1| cleavage and polyadenylation specificity factor [Culex quinquefasciatus] Length = 688 Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats. Identities = 66/438 (15%), Positives = 132/438 (30%), Gaps = 60/438 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ L+ PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 15 ENDLLLIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLI 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 67 E--ADEVDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKVSNIS 124 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 125 TEQMLYTEADLEASMEKIETINFHEERDVMGVRFWAYNAGH-VLGAAMFMIEIAGVKILY 183 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I L+ +ST ++ + ++ + Sbjct: 184 TGDFSRQEDRHLMA-------AEIPTMKPDVLITESTYGTHIHEKREDRESRFTSLVQKI 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 237 VQQGGRCLIPVFA--LGRAQELLLILDEYWSQNPELQEIPIYYASSLAKKCMAVYQTYIN 294 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 D++ + + + E ++ M L+ + + S Sbjct: 295 AMNDKIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFETWCSD 354 Query: 334 AIPG-------NEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 G E + G ++ + + S H + Sbjct: 355 PKNGVIIAGYCVEGTLAKTVLSEPEEITSMSGQKLRLNMSVDYISFSAHTDYQQTSEFIR 414 Query: 382 WIRPQVLVAIHGEPLHLV 399 ++P +V +HGE + Sbjct: 415 LLKPTHVVLVHGEQNEMN 432 >gi|198421242|ref|XP_002128016.1| PREDICTED: similar to Cleavage and polyadenylation specificity factor subunit 3 (Cleavage and polyadenylation specificity factor 73 kDa subunit) (CPSF 73 kDa subunit) (mRNA 3-end-processing endonuclease CPSF-73) [Ciona intestinalis] Length = 690 Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 73/497 (14%), Positives = 138/497 (27%), Gaps = 63/497 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLG E+G + L + K IM+DCG+ L G P I F Sbjct: 17 LKITPLGAGQEVGRSCHLLEF----KEKKIMLDCGIHPGISGLAG----LPYIDFTE--P 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV------------- 110 + + + +TH H DH G L V+ + + Sbjct: 67 EKIDLLLVTHFHLDHAGGLPWFLQKTTFKGRVFMTHATKAIYRWLLSDYIKVSNISTEDQ 126 Query: 111 ---YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + I ++ VG H + +I+ +++TGD+ Sbjct: 127 LYTEADLEDSMARIETINFHEEKMVGGIKFWCYHAGH-VLGAAMFMIQIAGVRVLYTGDY 185 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIYDIMKNA 224 ++D L I L+ ++T E+ + + DI+ Sbjct: 186 SREEDRHLMA-------AEIPAVRPDVLITEATYGTHIHEPREEREARFTNTVQDIVNRG 238 Query: 225 KGCVL-----------------VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 C++ + I + V S + Sbjct: 239 GRCLIPVFALGRAQELLLILDDYWANHPELHDIPIYYASSLAKKCMAVYQTYSNAMNQKI 298 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 + I Q G+ + + P + LSR + ++ Sbjct: 299 QKQLNISNPFQFKHISNLKGMEHFDDVGPSVV--MASPGMMQSGLSRELFESWCNDRRNG 356 Query: 328 VIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 VI + + G I +V + + + + + S H + ++P Sbjct: 357 VIVAGYCVEGTLAKHILSEPEEVVSMSGQKIPLKLSVDYISFSAHADYKQCSEFVRAMKP 416 Query: 386 QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVV---HGLFLK 442 +V +HGE + K +E P++ + E + G Sbjct: 417 PHVVLVHGEANEMNRLKLALNREYEDDPEPIQIHNPKNTESVQLYFKGEKMAKVMGELAT 476 Query: 443 DGFLIGKFADLGIAKRR 459 G + KR Sbjct: 477 TKPKHGDKLSGILVKRN 493 >gi|195143691|ref|XP_002012831.1| GL23717 [Drosophila persimilis] gi|194101774|gb|EDW23817.1| GL23717 [Drosophila persimilis] Length = 597 Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 70/438 (15%), Positives = 142/438 (32%), Gaps = 62/438 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLTMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYNGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWINVGSQSVV 174 Query: 162 HTGDWKLDDD-AILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 +TGD+ + D + D L+ +ST A R+ E+ K ++ Sbjct: 175 YTGDYNMTPDRHLGAAWIDNAR--------PDLLISESTYATTIRDSKRCRERDFLKKVH 226 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVG 272 + + G VL+ F+ + R + + + E I ++ + Sbjct: 227 ECVARG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFI 283 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLA 323 ++ + ++ + + P + + A LS + Sbjct: 284 TWTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPN 343 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 E + VI + G +G K E V + A + S H + ++ Q Sbjct: 344 ENNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQ 403 Query: 382 WIRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 404 NCEPKNVMLVHGEAEKMK 421 >gi|255513745|gb|EET90010.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 655 Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 80/467 (17%), Positives = 148/467 (31%), Gaps = 74/467 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL------- 53 +K+E L LGG E+G + L + I+IDCG+S P+ + G+D Sbjct: 185 IKSEWLKATALGGFREVGRSCLLLE----TPNSKIIIDCGIS-PEPGIKGLDANANQEGN 239 Query: 54 -VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 FP I + A+ +TH H DH G + L+ + PVY +P L Sbjct: 240 KAFPYIDSANISINEIDAVILTHGHMDHMGFVPYLFKYGYEGPVYCTPPTRDLAALLLTD 299 Query: 112 E--------------RVSKKIPCISFQAGDKVDVGAFSIESVRVNH---SIPETMALVIR 154 K + D +V + E H I + + + Sbjct: 300 YTRLVQKSGGTPLYGEKDIKKMLLHMITRDYGEVTNITDELKLTYHNAGHILGSATVHLH 359 Query: 155 --SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + NIVHTGD K +L ++ + AL +ST + Sbjct: 360 VGEGMYNIVHTGDMKYGFTRLLDP-------ASVKYPRVDALFIESTYGGPRDISQNRHD 412 Query: 213 IKKNIYDIMKNA---KGCVLVTTFSSSVSRIR---------SIIDIAEQIGRKIVLLGSS 260 ++ + +++K G VL+ F+ V R + + ++ + L G Sbjct: 413 TERELMELIKRTINRNGKVLIPLFA--VGRSQELQLVLENYMTNNGPYKLDVPVYLDGMI 470 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI------ATGSQGEPRSALAQLSR 314 L+ +K++ + + E VI A + Sbjct: 471 LEASAIHTAYPEYLKENVRNRILNNRSPFESEIFEVIKGERSDVFDKGPAIILASGGMLN 530 Query: 315 G-----EMRNVKLAEKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAE 362 G + + + ++F N + + N + + + Sbjct: 531 GGASVEYFKGLLANPDNAMVFVGYNSANSLGRRIQNGLKEVALPNEDGKITPMEVKMNVA 590 Query: 363 CPVHVSGHPYPNDLKRMYQW--IRPQVLVAIHGEPLHLVAHKELALQ 407 SGH + L + ++P+ + +HGE + Sbjct: 591 TVEGFSGHSDRHQLIDFVEKLNVKPKSIFTMHGEEQKCEDLARTLGK 637 >gi|125773833|ref|XP_001358175.1| GA15164 [Drosophila pseudoobscura pseudoobscura] gi|54637910|gb|EAL27312.1| GA15164 [Drosophila pseudoobscura pseudoobscura] Length = 597 Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLTMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYNGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVARG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|325968825|ref|YP_004245017.1| mRNA 3'-end processing factor, conjectural [Vulcanisaeta moutnovskia 768-28] gi|323708028|gb|ADY01515.1| mRNA 3'-end processing factor, conjectural [Vulcanisaeta moutnovskia 768-28] Length = 433 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 157/437 (35%), Gaps = 39/437 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L+ LG GE+G +S + + D GV+F ++D P V P Sbjct: 3 DLIVRVLGSGGEVGR--MAIFVKDINSDRGFLFDYGVNFDENDKP----VMPS----HVR 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISF 123 +++MA+F++HAH DH GAL L+ PVYA+P + L + ++S Sbjct: 53 PRDIMAVFLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYED 112 Query: 124 QAGDKVDVGAFSIESVR-------------VNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + V A + +P +M ++ ++ TGD+ L Sbjct: 113 EEIKAVLDHAIPVTYGEDIDISKDVKATIINAGHVPGSMLTLLELNGARVLFTGDFNLAS 172 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 +L D +S+ + + ++ + T E+ ++ I I + + V Sbjct: 173 SNLL-RGADVNSV----PKDVDVVIMEGTYVANTHP-PREEVEREFIKVIKETIESGGSV 226 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS--VAIDVGIIKKDQLFLSDESFGL 288 ++ R + I+ + G ++ L R+ + VA + +L+L L Sbjct: 227 LIPVLTIGRAQEILITLYKNGIDYPIIIDGLARLANQIVAKYPHYLANPELYLKAVENSL 286 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEM-----RNVKLAEKDTVIFSSRAIPGNEVAIG 343 + + + A + +G + + ++ +I S P Sbjct: 287 EITTDYQRRSLSKEPVIIVSPAGMLKGGAAVYYLKRLSRDRRNAIILPSYQAPDTPGFEL 346 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLVAH- 401 + R V+ + S H +L+ + P ++ +H E + + Sbjct: 347 LTRGRAFIDKGEVVLDAKLYWFDFSSHSGRAELEAFIRHFNPDTKIILVHTEAIKALQFL 406 Query: 402 KELALQEGIACVPPVRN 418 + L ++ GI V N Sbjct: 407 ERLKVKYGIDNVHVPTN 423 >gi|296243052|ref|YP_003650539.1| beta-lactamase domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095636|gb|ADG91587.1| beta-lactamase domain protein [Thermosphaera aggregans DSM 11486] Length = 425 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 71/451 (15%), Positives = 143/451 (31%), Gaps = 64/451 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L LGG E+G L R+ ++ D GV+F + DLP P + Sbjct: 4 KLRI--LGGGREVGRAAYLLE-----GRERVLFDYGVNFDEKDLP----QLP----LHVR 48 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKI 118 +L A+ I+HAH DH GA L+ +YA+ + + K + + Sbjct: 49 PVDLDAVVISHAHLDHVGAAPYLFITGKPKIYATRPTLDIARLLTIDFLKLNAAVIEYDM 108 Query: 119 PCISFQAGDKVDVG-------AFSIESVRVNHSIPETMALVIRS-PVGNIVHTGDWKLDD 170 V V F + H I + + + + I++TGD Sbjct: 109 LEFEKMYSSTVFVDYQESVEQGFKLVFTNAGH-ILGSTMVYLETSTGEKILYTGDVNNIS 167 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNAKGCV 228 L G+ ++ +ST R EK + + +++ G V Sbjct: 168 TWTLSG-------ADFLPVGVDTIIMESTYGGRNHPKRHLVEKRFVETVEEVVDKG-GTV 219 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV--SVAIDVGIIKKDQLFL----- 281 L+ FS V R + ++ + + + + + V ++ LF+ Sbjct: 220 LIPAFS--VGRSQELMTLLTSELPYVDIYIDGMVKDVSEIYLKHRKFLRDPGLFMKTVEN 277 Query: 282 -----SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + ++IA+ + ++ + + ++ V+ S P Sbjct: 278 VNFVTKASERKKLVSKPCVIIASAGMLKGGPSVYYF-----KKIAENPRNAVLLVSYQAP 332 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMYQWIRP--QVLVAIHG 393 + + + A + S H + L + + + + ++ IHG Sbjct: 333 A--SNGHKLLEEGRLPELELNEVKARVEWYDFSSHAGRDGLAEIAEKYKASLKNVILIHG 390 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 K+ + V V + Sbjct: 391 GEDDQEVLKKELAERLGGDVKIVTPKTGDEV 421 >gi|170289661|ref|YP_001736477.1| RNA processing exonuclease [Candidatus Korarchaeum cryptofilum OPF8] gi|170173741|gb|ACB06794.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Candidatus Korarchaeum cryptofilum OPF8] Length = 424 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 76/421 (18%), Positives = 153/421 (36%), Gaps = 51/421 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK ++ LGG E+G + L G R +++D G+ + P+ Sbjct: 1 MKVAKISITCLGGTREVGKSAILLEAG----RTKVLLDYGMKL-------IPKQHPEFPP 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRV 110 I +E + A+ +THAH DH GAL L S + VP+YA E AK Sbjct: 50 IPEE---VDAVLLTHAHLDHSGALPRLVSHGMEVPIYALDITKYYTELLLYDSIKVAKLK 106 Query: 111 YERVSKKIPCI--------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + + VG + ++ H IP + I ++++ Sbjct: 107 GHNLGYGARDVNKTLENFRTIDFNIPFKVGDLEVTAIDAGH-IPGSAMFHISYDGTSLLY 165 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI-KKNIYDIM 221 TGD+ + ++ + + + L+ ++T A +E ++ I K Sbjct: 166 TGDFNTVESRLMP----PARIEDVPK--VDILITETTYAKKEHPPRDKQEILLKETVMET 219 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-KRVVSVAIDVGIIKKDQLF 280 N+ G ++ F+ + R+ + G K + + K+ + + ++ Sbjct: 220 LNSGGTAIIAGFA--IGRLLEVAMALRARGFKGDIFLDGMAKKSTEITSEFSNKVRNYEE 277 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----MRNVKLAEKD---TVIFSSR 333 +S + P + P L E VK ++D T+I + Sbjct: 278 MSLTIRSMIPVRD-WGMRERVAKRPSVVLTTSGMLEGGPVHYYVKERKEDESSTLILTGY 336 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + G+E + ++ G ++ S H + + + + + P+ +VA+HG Sbjct: 337 QVDGSEGRRLLEEGKMEIDGEDNWVTMKVNQLNFSAHVSRSGILKTIRDLNPREVVAVHG 396 Query: 394 E 394 + Sbjct: 397 D 397 >gi|33300633|ref|NP_060341.2| integrator complex subunit 11 [Homo sapiens] gi|118572557|sp|Q5TA45|INT11_HUMAN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein; AltName: Full=Protein related to CPSF subunits of 68 kDa; Short=RC-68 gi|14124912|gb|AAH07978.1| Cleavage and polyadenylation specific factor 3-like [Homo sapiens] gi|60650138|tpg|DAA05669.1| TPA_exp: beta-lactamase fold protein family member RC-68 [Homo sapiens] gi|78100161|tpg|DAA05728.1| TPA_exp: integrator complex subunit 11 [Homo sapiens] gi|119576636|gb|EAW56232.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a [Homo sapiens] gi|119576638|gb|EAW56234.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a [Homo sapiens] Length = 600 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPANG 441 >gi|18313978|ref|NP_560645.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161552|gb|AAL64827.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] Length = 430 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 80/449 (17%), Positives = 157/449 (34%), Gaps = 43/449 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE+G L S I++D GVSF +D P VFP + Sbjct: 1 MKIRLLGGAGEVGRLAVLIKTASNG----ILLDYGVSFDANDKP----VFP----LHVRP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 ++L A F++HAH DH G L L+ P+Y++P + L + K + + Sbjct: 49 RDLTATFLSHAHLDHSGGLPSLYVSTKTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTLE 108 Query: 120 C--------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + G+ V++G ++ +V IP + VI +V TGD+ D Sbjct: 109 EVRETMSSAVPLTYGEPVEIGRDAVITVYNAGHIPGSAISVIEVEGYVVVFTGDFNTVDS 168 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 +L D ++ + ++ ++T A + E+ ++ + + + +G V Sbjct: 169 NLL-RGADLYNI----PKNPDVVIMEATYASTDHP-PRERLEREFVQSVKEVLEGGGSVL 222 Query: 232 TFSSSVSRIRSIIDIAEQIGR---KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 S ++ R + I+ + G I + G + + V ++K L+ + Sbjct: 223 IPSFALGRAQEILLTLVKYGIDAYPIYVDGLARQINQIVGRYPHLLKDPDLYKKALEISI 282 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIG 343 + + A + +G + + +K+ + S P N Sbjct: 283 EVPNAYVRKGAVEEPSVIITPAGMLKGGAALFYFKKMAQNKKNGIFLPSFQAP-NTPGFQ 341 Query: 344 HIKNRLVEQG-VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLVAH 401 + + E S H +L+ + P+ ++ +H +PL Sbjct: 342 ILSKGYAFLDGTTIKVEARLEWFDFSAHAGRRELEEFVKRFTPETKIILVHTDPLTAAPF 401 Query: 402 KELALQEGIACVPPVRNGKMLRLFPDPIE 430 +EG + Sbjct: 402 IRRLAKEGYDNIYLPTASGEEIFLSKKFW 430 >gi|119576641|gb|EAW56237.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_e [Homo sapiens] Length = 578 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 144/450 (32%), Gaps = 68/450 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 168 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 219 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 220 LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFE 279 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI- 345 + + P + V S R GNE + + Sbjct: 280 FKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMP 329 Query: 346 ---------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + +L +G +V+ + + S H + ++ P+ ++ Sbjct: 330 GYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVL 389 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +HGE + K+ QE NG Sbjct: 390 LVHGEAKKMEFLKQKIEQELRVNCYMPANG 419 >gi|32564696|ref|NP_495706.2| hypothetical protein F10B5.8 [Caenorhabditis elegans] gi|26985793|emb|CAB54223.2| C. elegans protein F10B5.8, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 608 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 63/441 (14%), Positives = 139/441 (31%), Gaps = 62/441 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K E+ +PLG ++G + L G + IM+DCG+ D D FPD ++I Sbjct: 4 KIPEIKIVPLGAGQDVGRSCILITIGGKN----IMVDCGMHMGYQD----DRRFPDFSYI 55 Query: 62 M---KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--- 113 + L + I+H H DH G+L + P+Y + + R Sbjct: 56 GGGGRLTDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQ 115 Query: 114 --VSKKIPCISFQAGDKVDVGAFSIESVRVNH-------------SIPETMALVIRSPVG 158 + + + + H + IR Sbjct: 116 CDIKGETNFFTSDDIKNCMKKVVGCALHEIIHVDNELSIRAFYAGHVLGAAMFEIRLGDH 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKN 216 ++++TGD+ + D + + L+ +ST A R+ E+ + Sbjct: 176 SVLYTGDYNMTPDRH------LGAARVLPGVRPTVLISESTYATTIRDSKRARERDFLRK 229 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAID 270 +++ G V++ F+ + R + + + E I +R Sbjct: 230 VHE-CVMKGGKVIIPVFA--LGRAQELCILLESYWERMALNVPIYFSQGLAERANQYYRL 286 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVK 321 + + + ++ + + + G + +P + + G + Sbjct: 287 FISWTNENIKKTFVERNMFEFKHIKPMEKGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWC 346 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKR 378 + +I + G + N + + + + S H + + Sbjct: 347 SDPLNMIIMPGYCVAG--TVGARVINGEKKIEIDQKMHEIRLGVEYMSFSAHADAKGIMQ 404 Query: 379 MYQWIRPQVLVAIHGEPLHLV 399 + + PQ ++ +HGE + Sbjct: 405 LIRQCEPQHVMFVHGEASKME 425 >gi|268552491|ref|XP_002634228.1| Hypothetical protein CBG01798 [Caenorhabditis briggsae] Length = 722 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 80/455 (17%), Positives = 149/455 (32%), Gaps = 59/455 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ L F PLG E+G + L Y K +M+DCGV L GVD P + F+ Sbjct: 7 NSDALSFTPLGSGQEVGRSCHLLEY----KGKRVMLDCGV---HPGLHGVDA-LPFVDFV 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 +N+ + ITH H DH GAL L + + + Sbjct: 59 E--IENIDLLLITHFHLDHCGALPWLLQKTAFRGKCFMTHATKAIYRMLLGDYVRISKYG 116 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + K + I ++ +V H + +I + Sbjct: 117 GADRNQLYTEDDLEKSMAKIETIDFREQKEVNGIRFWPYVAGH-VLGACQFMIEIAGVRV 175 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIY 218 ++TGD+ +D L I L+ +ST + S EK + ++ Sbjct: 176 LYTGDFSCLEDRHLCA-------AEIPPVSPQVLITESTYGTQTHEDRSVREKRFTQMVH 228 Query: 219 DIMKNAKGCVL----VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGI 273 DI+ C++ + + + + +++ V SSL + +SV Sbjct: 229 DIVTRGGRCLIPAFAIGPAQELMLILDEYWEAHQELHDIPVYYASSLAKKCMSVYQTFVN 288 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 ++ + + + + Q E P + SR N Sbjct: 289 GMNSRIQKQIAIKNPFIFKHVSTLRGMDQFEDAGPCVVLATPGMLQSGFSRELFENWCSD 348 Query: 324 EKDTVIFSSRAIPGNEVAIGHI--KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ I + + G + + G ++ V S H N + Sbjct: 349 SKNGCIIAGYCVEGTLAKHILTEPEEIVSLSGEKLPMRMQVGYVSFSAHTDFNQTSNFVK 408 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 ++P LV +HGE LH ++ + ++ + Sbjct: 409 TLKPPHLVLVHGE-LHEMSRLKAGIERLFQDINIP 442 >gi|294781987|ref|ZP_06747319.1| metallo-beta-lactamase [Fusobacterium sp. 1_1_41FAA] gi|294481798|gb|EFG29567.1| metallo-beta-lactamase [Fusobacterium sp. 1_1_41FAA] Length = 401 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 137/393 (34%), Gaps = 32/393 (8%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG ++ S I++D G + + +V P+I + K + Sbjct: 10 GQNQIGGSI----IEVSSKNTKIILDVGSNLDDKE-----IVVPEIEGLFKGKAKYDGAL 60 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 I+H H DH G + +P+Y + + + R Y + +F+A ++ +G Sbjct: 61 ISHYHSDHVGLATRILPE--IPIYMGEKSYEIHKVTREYIKKEYLKEPKTFKADEEFLIG 118 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I +HS ++ ++ I++TGD++ + + + L + Sbjct: 119 DIKITLYLCDHSAFDSHMFLLECEGKKILYTGDFRS--NGRKFFQSLLNKL-----PKVD 171 Query: 193 ALMCDSTNAMRE---GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 AL+ + TN ++EK ++K ++++ V V +++ RI ++ IA Sbjct: 172 ALITEGTNLSNNKIGKINLTEKELEKRGIELLEGNDRPVFVLMAGTNIDRIVTLYKIANA 231 Query: 250 IGR------KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATGSQ 302 R + ++ ++ + ++ YP+ ++ Sbjct: 232 TKRLFLIDTYVGVITDTIGGNIPNPRTFSNVRIFLTNQDKYEILKNYPKNKIWKSKIAKS 291 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 A + + + I G + ++ Sbjct: 292 NFLMCIRASMKKYLESYPNEFSFEGCILFYSMWEGYKKQ----EDTKEFLEFMEEKGVKV 347 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 +H SGH D ++ + + P +++ IH E Sbjct: 348 ISLHTSGHADEKDFDKLIKKVEPGIIIPIHTEN 380 >gi|312381513|gb|EFR27247.1| hypothetical protein AND_06171 [Anopheles darlingi] Length = 624 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 78/463 (16%), Positives = 155/463 (33%), Gaps = 60/463 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD +FI+ E Sbjct: 3 DIKITPLGAGQDVGRSCILLSMGGKN----IMLDCGMHMGYND----ERRFPDFSFIIPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITNHIDCVIISHFHLDHCGALPYMTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR ++V Sbjct: 115 KGESNFFTPQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCKPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E + ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPVYFAVGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + G P + + A LS + E Sbjct: 285 WTNQKIRKTFVQRNMFDFKHIKPFDKGYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + + + S H + ++ Q+ Sbjct: 345 NNMVIMPGYCVQGTVGHKILGGAKKVEFENRQVVEVKMSVEYMSFSAHADAKGIMQLIQF 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 P+ ++ +HGE + + KE +E NG+ + Sbjct: 405 CEPRNVMLVHGEAVKMEFLKEKIREEFRIECYTPANGETCTIS 447 >gi|301618510|ref|XP_002938656.1| PREDICTED: integrator complex subunit 11 isoform 1 [Xenopus (Silurana) tropicalis] gi|301618512|ref|XP_002938657.1| PREDICTED: integrator complex subunit 11 isoform 2 [Xenopus (Silurana) tropicalis] Length = 600 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 72/457 (15%), Positives = 145/457 (31%), Gaps = 61/457 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L G + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIGGKN----VMLDCGMHMGYND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L + I+H H DH GAL + P+Y + + R Sbjct: 55 GRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V VN + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVEKG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAE 324 ++ + ++ + + P + + G R + Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGND 344 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE--DAECPVHVSGHPYPNDLKRMYQW 382 K+ VI + G R +E R E + S H + ++ + Sbjct: 345 KNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQTLEVKMQVEYMSFSAHADAKGIMQLIRQ 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 P+ ++ +HGE + +L +++ + Sbjct: 405 AEPRNVLLVHGEAKKM-EFLKLKIEQEFRINCAMPLN 440 >gi|108802875|ref|YP_642812.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764118|gb|ABG03000.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 813 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 82/452 (18%), Positives = 151/452 (33%), Gaps = 64/452 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L F LGG GE+G + L +GS +++D G+ PD +E Sbjct: 391 TLAFRALGGAGEVGGSSHLLDFGSTR----VLVDAGIKPDGRGQL-----APDF----EE 437 Query: 65 RKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYER---------- 113 L ITHAH DH GAL L +P+Y +P + L+ + Sbjct: 438 IGPLDGAIITHAHLDHCGALPLLVKNHPQLPIYCTPPSAKLIVSALNDHAAMGGGVPGGA 497 Query: 114 --VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 K +S G +VG ++ H I ++++RS + HTGD Sbjct: 498 PIHEVKKRLVSVPFGKPFEVGGATVTLTESGH-ILGAASVLLRSSSAMVFHTGDI----C 552 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMKNAKGCVL 229 L + GI L+ ++T A + +E K + + I + G VL Sbjct: 553 MEDHFSIPPARLPEV--SGIDLLIMEATLADQRPQPFNESIKKMVRVINETTLERGGTVL 610 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS----------VAIDVGIIKKDQL 279 + T++ + + + II + G++ L + V A + +K Sbjct: 611 IPTYA--LGQAQEIILGLKYFGKEHGLE-RDVFIYVDGSVVTTSERLYAEQLRYMKPYLQ 667 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK---LAEKDTVIFSSRAIP 336 E + +A + ++ + E F R + Sbjct: 668 HTDPRELFF--SENIRAVANDDRARE-----RILANPCAIIASPVTMEGGASAFYRRRLE 720 Query: 337 GNEVAIGHIKNRLV-----EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 G+E + + + + + V + H +L + + + P+ ++ I Sbjct: 721 GSERNAVILPSNAASSYGTHRAIGEGSSWRVERVSFAAHCTQEELLGITEKLSPRQIILI 780 Query: 392 HGEPLHLVA-HKELALQEGIACVPPVRNGKML 422 HG + LA + I + + Sbjct: 781 HGSRRRISDLAFRLAPKHKIHTPAVGETVRTV 812 >gi|118572558|sp|Q5NVE6|INT11_PONAB RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein Length = 600 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANG 441 >gi|56403864|emb|CAI29717.1| hypothetical protein [Pongo abelii] Length = 600 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTSVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANG 441 >gi|46580110|ref|YP_010918.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449526|gb|AAS96177.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233894|gb|ADP86748.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris RCH1] Length = 415 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 76/409 (18%), Positives = 139/409 (33%), Gaps = 53/409 (12%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G EIG + G S I+ID G + ++ DI+F A+ Sbjct: 8 GTQEIGGSCVQLSSGGRS----ILIDAGSPLRESQ---CEVKLSDISF--------EAVL 52 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISFQAGDKVDV 131 ++H H+DHYG + L PVY A ++ A R + R F+A + ++ Sbjct: 53 VSHPHQDHYGLIDSL--DPATPVYIGEIACKMIAAARTFTSRPPLANNFRHFKAWTQFEI 110 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G F I ++HS + ++ + + ++GD++ + + Sbjct: 111 GPFRITPYLMDHSSTDAFGFLVEAEGKRLFYSGDFRAHGSKEKTFDALLAR----PPQKV 166 Query: 192 LALMCDSTNAMREGT-CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ + T RE EK I+ + +++ KG + V R+ + + Sbjct: 167 DVLLMEGTMLGRESAAYRREKNIENEMLEVLSEEKGPAFLICSGQHVDRLCAAFRACRKA 226 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 GR V+ + + ++ +L P + +A + + Sbjct: 227 GRIYVVDIYTAWILQILSEHFDTTPHFRLK-DIRVLAHGPTAKNHYMAIKN----NAKFT 281 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC------- 363 + R + ++ + S I H+ N L +I Sbjct: 282 RFIREIYKTDTAIKESQIAESPSRYFIKNTRIDHLLNALNPPQCSLIYSQWSGYLESQYN 341 Query: 364 ------------------PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 +H SGH + DLKR I P++LV IH E Sbjct: 342 PQSWKLTNLRDDPRVSFHEIHTSGHAFRQDLKRYANAINPKLLVPIHTE 390 >gi|296206477|ref|XP_002750225.1| PREDICTED: integrator complex subunit 11-like isoform 1 [Callithrix jacchus] Length = 600 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANG 441 >gi|242398880|ref|YP_002994304.1| Cleavage and polyadenylation specficity factor subunit like protein [Thermococcus sibiricus MM 739] gi|242265273|gb|ACS89955.1| Cleavage and polyadenylation specficity factor subunit like protein [Thermococcus sibiricus MM 739] Length = 648 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 80/474 (16%), Positives = 164/474 (34%), Gaps = 76/474 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL---VFPD 57 +K++ + LGG E+G + L ++ ++++D GV+ + + P L P+ Sbjct: 181 LKSDWIRITALGGFREVGRSALLL----QTNESFVLVDFGVNVAELNDPKKGLPHFEAPE 236 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 T+++KER L AI +THAH DH G L L+ + P+Y +P L+ + Sbjct: 237 FTYVLKERL-LDAIIVTHAHLDHSGLLPYLFRYNLFDGPIYTTPPTRDLMILLQKDFIEI 295 Query: 116 KKIPCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPV---- 157 ++ + D +V S + H+ + I Sbjct: 296 QQSNGVEPLYRMKDIKEVVKHTIALDYGEVRDISPDLRLTLHNAGHVLGSAIAHLHVGNG 355 Query: 158 -GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 NI TGD+K + + L+ +ST + + +K Sbjct: 356 LHNIAVTGDFKFAPTRLFEP-------ANSKFPRLETLIMESTYGGSRDYQMPREEAEKK 408 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVVS 266 + + + + KG VL+ + V R + I+ E G ++ + + + Sbjct: 409 LIETIMHTIKRKGKVLIPAMA--VGRSQEIMIALEDYARVGGFEVPIYLDGMIWEATAIH 466 Query: 267 VAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG- 315 A + K + + E + + E+ +I + ++ L G Sbjct: 467 TAYPEYLSKNLRNQIFHEGYNPFLNEIFKPVANANERKDIIESEEPAIIIASSGMLVGGP 526 Query: 316 ---EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAEDAECPV 365 +++ +++++F S G + + + I + Sbjct: 527 SVEYFKHLAPDPRNSLVFVSYQAEGTLGRQVQRGLREIPMIGEGGKTEAIQINMEIHTID 586 Query: 366 HVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP HK+ + Sbjct: 587 GFSGHADRRELMNYISRVRPRPERVITVHGEPQKCLDLASSIHKKFGISTRAPN 640 >gi|315426651|dbj|BAJ48277.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 417 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 92/423 (21%), Positives = 150/423 (35%), Gaps = 58/423 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS---FPKDDLPGVDLVFPDITFIM 62 + LGG E+G + L Y I++D GV P+ +P Sbjct: 1 MEITFLGGCLEVGRSGILVSY----KNTRILLDYGVMLNDHPEFPMP------------- 43 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEA--KRVYERVSK 116 E K L AI +THAH DH G + L+ + +Y + L++ K + + Sbjct: 44 VETKKLNAIILTHAHLDHSGGIPMLYINRNPKLYTTSMTRDTATLLIKDFIKLSGQYLLF 103 Query: 117 KIP--------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +F + VG IE V H IP + A V+ + +V+TGD+ Sbjct: 104 ENQELEKMLRNTRTFYYREPFTVGDLEIELVDAGH-IPGS-AQVLVNGDKTLVYTGDFTT 161 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKG 226 +L + A++ +ST A + EK K ++++N G Sbjct: 162 VKTRMLDG-------ADTTIGDVDAVIIESTYAHEDHNPRQELEKEFVKACREVVENG-G 213 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 VLV FS V R + I+ I I L G + K + + D + + Sbjct: 214 RVLVPAFS--VGRSQEILCILAAHNFPHPIWLDGMAKKTLETYLSDKRFVDNVDILEKAS 271 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNE 339 + + + S+ A + +G + EK + SS IPG Sbjct: 272 RKTRFVKGRRGRETALSEPGVIVTPAGMLKGGPALYYAPEIVEDEKSAIFLSSFQIPGTP 331 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLH 397 I + RLV + A SGH + L + I ++ +HGEP Sbjct: 332 GEILLNQGRLVIDNLDKPANCIIKQFRFSGHAGRSQLHDYLRKIETNAKIFT-VHGEPEM 390 Query: 398 LVA 400 Sbjct: 391 CKT 393 >gi|167525469|ref|XP_001747069.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774364|gb|EDQ87993.1| predicted protein [Monosiga brevicollis MX1] Length = 730 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 68/463 (14%), Positives = 141/463 (30%), Gaps = 65/463 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++ +PLG ++G + L G + IM DCG+ +D FPD T + Sbjct: 7 SDDIRVVPLGAGQDVGRSCVLVTMGGRT----IMFDCGMHMGYNDA----RRFPDFTQVA 58 Query: 63 KER--KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ ITH H DH GAL P+Y + + + R Sbjct: 59 QGPLTDHIDLAIITHFHLDHCGALPYFTEQVGYDGPLYMTMPTRAIAQVLLEDYRKIAVS 118 Query: 119 PCISFQAGDKVDVG-------------------AFSIESVRVNHSIPETMALVIRSPVGN 159 + D+ F I++ H + +R + Sbjct: 119 RQGEKNFFTRDDIKTCLNKATTIDLHQTVVIDQDFEIKAYYAGH-VLGAAMFYVRVGNQS 177 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNI 217 +V+TGD+ + D LG I ++ +ST A R+ E + + Sbjct: 178 VVYTGDYNMSPDRHLGA-------AWIDRCEPDVIISESTYATTIRDSRRAREHDL---L 227 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLL------GSSLKRV-VS 266 I + + V ++ R + + ++ G ++ + + + + Sbjct: 228 TKITQCVQRGGKVLLPVFALGRAQELCILLETHWQRTGMRVPIYFSTGLTARANEYYKLF 287 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----MRNVKL 322 + +K+ + + F + + L G + Sbjct: 288 ITWTNQKLKETFVERNLFDFQHVQPFDRSYLEHAGPQVLFATPGMLHAGTSLLAFTHWCE 347 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP---VHVSGHPYPNDLKRM 379 ++ VI G I + E + + S H + ++ Sbjct: 348 DPRNMVILPGYCTAG--TVGAKIIAGIRELDIEGRHYTVRMDVEYLSFSAHADAKGIMQL 405 Query: 380 YQWIRPQVLVAIHGEPL-HLVAHKELALQEGIACVPPVRNGKM 421 + +V +HGE + + G+ C P + Sbjct: 406 VSQSGAKQVVLVHGEQQKMAFLAGRIQQELGLPCHFPPNGHCL 448 >gi|328873132|gb|EGG21499.1| integrator complex subunit 11 [Dictyostelium fasciculatum] Length = 645 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 65/441 (14%), Positives = 139/441 (31%), Gaps = 67/441 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG ++G + + G+ + IM DCG+ D + FPD +FI K + Sbjct: 3 IKVVPLGAGQDVGRSCVIVSIGNKN----IMFDCGMHMGYHD----ERRFPDFSFISKTK 54 Query: 66 ---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 K L I ITH H DH GAL P+Y + ++ R Sbjct: 55 QFTKTLDCIIITHFHLDHCGALPYFTEMCGYDGPIYMTLPTKAIVPILLEDYRKISVDRK 114 Query: 121 ISFQAGDKVDVGAFSIESVRV------------------NHSIPETMALVIRSPVGNIVH 162 + + + + + + ++V+ Sbjct: 115 GETNFFTPQMIKDCMKKVIPIALHQTIKVDDELSIKAYYAGHVLGAAMFYAKVGEESVVY 174 Query: 163 TGDWKLDDD-AILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 TGD+ + D + D+ L+ ++T A R+ E+ K +++ Sbjct: 175 TGDYNMTPDRHLGSAWIDQVR--------PNLLITETTYATTIRDSKRGRERDFLKRVHE 226 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 G VL+ F+ + R++ + + + I ++ Sbjct: 227 -CVEKGGKVLIPVFA--LGRVQELCILIDSYWEQMNLNVPIYFSEGLAEKANFYYKLFIT 283 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVI--- 329 ++ + ++ + + P L L Sbjct: 284 WTNQKIKQTFVKRNMFDFKHIKPFDRHLADAPGPMVLFATPGMLHAGASLEVFKKWAPNE 343 Query: 330 FSSRAIPGNEVAIGHIKNRL-----------VEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + IPG +G + N+L +++ + + + S H + + Sbjct: 344 LNMTIIPGY-CVVGTVGNKLLSNAGGPQMVEIDKKTTLEVKCKIHNLSFSAHADAKGIMQ 402 Query: 379 MYQWIRPQVLVAIHGEPLHLV 399 + + +P+ ++ +HGE + Sbjct: 403 LIKMSQPKNVLLVHGEKEKMR 423 >gi|303391080|ref|XP_003073770.1| putative beta-lactamase fold-containing exonuclease [Encephalitozoon intestinalis ATCC 50506] gi|303302918|gb|ADM12410.1| putative beta-lactamase fold-containing exonuclease [Encephalitozoon intestinalis ATCC 50506] Length = 696 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 73/464 (15%), Positives = 149/464 (32%), Gaps = 76/464 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD---DLPGVDLVFPDI 58 +E++ +PLG E+G + + G + IM+DCGV LP +DLV D+ Sbjct: 3 SSEKIKVMPLGAGNEVGRSCVIVECGGRT----IMLDCGVHPAYTGVASLPFLDLV--DL 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--- 113 + + AIF+TH H DH AL L VY + +L+ Sbjct: 57 S-------KIDAIFVTHFHLDHAAALPFLTEKTSFKGKVYMTHPTKAILKWLLNDYIRLI 109 Query: 114 --------------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 V I +V+V ++++ H + ++ Sbjct: 110 NAASDADFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGH-VLGAAMFLVEIEKSK 168 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+ ++D L I AL+ +ST ++ SE+ + Sbjct: 169 ILYTGDFSREEDRHL-------KAAESPGCKIDALITESTYGVQCHLPRSERE-GRFTSI 220 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 + + ++ R + ++ I E+ +SL+++ + + Sbjct: 221 VQNVVQRGGRCLLPVFALGRAQELLLILEEH----WSSNASLQKIPIYYASALAKRCMGV 276 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN---VKLAEKDTVIFSSRAIP 336 + + ++L ++ + L + + + + SR + Sbjct: 277 YQTYIGMMNERIQKLSLVRNPFAFKYVKNLKGIDSFDDEGPCVIMASPGMLQSGLSRDL- 335 Query: 337 GNEVAIGHIKNRLVEQGVRV-----------------------IAEDAECPVHVSGHPYP 373 E KN ++ G V + + S H Sbjct: 336 -FERWCSDSKNAVIIPGYCVDGTLAKEILSEPKEIEALNGKRLRLNMSVEYISFSAHVDF 394 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 + + +P+ L +HGE + + + Q + Sbjct: 395 TQNSQFIEECQPRHLFFVHGEMNEMQRLRNVIQQRNEKKGIEME 438 >gi|194208169|ref|XP_001496423.2| PREDICTED: similar to cleavage and polyadenylation specific factor 3-like [Equus caballus] Length = 681 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 73/466 (15%), Positives = 144/466 (30%), Gaps = 80/466 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L PLG ++G + L G + +M+DCG+ +D D FPD ++I + Sbjct: 85 LRTSPLGAGQDVGRSCILVSIGGKN----VMLDCGMHMGFND----DRRFPDFSYITRNG 136 Query: 66 ---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VS 115 L + I+H H DH GAL P+Y + + R Sbjct: 137 RLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKK 196 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVH 162 + + Q ++ + + I+ ++V+ Sbjct: 197 GEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVY 256 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 257 TGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHET 309 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 ++ G VL+ F+ + R + + + I ++ Sbjct: 310 VERG-GKVLIPVFA--LGRAQELCILLETFWERVNLKAPIYFSTGLTEKANHYYKLFITW 366 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-- 332 ++ + ++ + + P + V S Sbjct: 367 TNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQ 416 Query: 333 --RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYP 373 R GNE + + + +L +G +V+ + + S H Sbjct: 417 IFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADA 476 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 477 KGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 522 >gi|157117185|ref|XP_001652976.1| cleavage and polyadenylation specificity factor [Aedes aegypti] gi|108876120|gb|EAT40345.1| cleavage and polyadenylation specificity factor [Aedes aegypti] Length = 687 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 132/438 (30%), Gaps = 60/438 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ L+ PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 15 ENDLLLIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLI 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 67 E--ADEVDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKVSNIS 124 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 125 TDQMLYTEADLEASMEKIETINFHEERDVMGVRFWAYNAGH-VLGAAMFMIEIAGVKILY 183 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I L+ +ST ++ + ++ + Sbjct: 184 TGDFSRQEDRHLMA-------AEIPAMKPDVLITESTYGTHIHEKREDRESRFTSLVQKI 236 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 237 VQQGGRCLIPVFA--LGRAQELLLILDEYWSQNPELQEFPIYYASSLAKKCMAVYQTYIN 294 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 D++ + + + E ++ M L+ + + + Sbjct: 295 AMNDKIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFETWCTD 354 Query: 334 AIPG-------NEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 G E + G ++ + + S H + Sbjct: 355 PKNGVIIAGYCVEGTLAKTILSEPEEITSMSGQKLPLNMSVDYISFSAHTDYQQTSEFIR 414 Query: 382 WIRPQVLVAIHGEPLHLV 399 ++P ++ +HGE + Sbjct: 415 ILKPAHVILVHGEQNEMN 432 >gi|323697620|ref|ZP_08109532.1| metallo-beta-lactamase family protein [Desulfovibrio sp. ND132] gi|323457552|gb|EGB13417.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans ND132] Length = 417 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 151/435 (34%), Gaps = 89/435 (20%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G EIG + Y + +++D G P DD P + + + Sbjct: 8 GTNEIGGSCVEVEY----NGTRLLLDAGT--PLDDSP---------AALPADIDAYAGVL 52 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--KIPCISFQAGDKVD 130 I+H+H+DHYG + L VP+Y A ++ R++ + I +AG Sbjct: 53 ISHSHQDHYGLVERLPE--DVPLYMGKVAWQFAQSLRLFTKTGDLLTHNPIPLEAGKTFR 110 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 VG S+ +HS P+ ++ + + +TGD++ D LC+ Sbjct: 111 VGDISVTPYLADHSSPDAFGFLLEAGGRVVYYTGDFRA--HGRKSKTFDY--LCSRLPRK 166 Query: 191 ILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + A++ + T R SE+ +++ + + ++ G V + + ++ R+ S A++ Sbjct: 167 MDAILLEGTMMDRGNSAFASEREVEEGMVEAIRAESGIVCLNCSAQNIDRMVSAFRAAKR 226 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 GR +V+ + A + + ++ + D + + V++ Sbjct: 227 SGRILVVD-------IYTAWILRLAQQLSANIPD-----INWDGMRVLSHNRPAAGYYRN 274 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-------------------NRLV 350 + E + S GNE+ + ++ +RL Sbjct: 275 VK----EHAEFFGGFLQDLYNS-----GNELWVQNLVDSPSKYLIKLSDYWLADILDRLP 325 Query: 351 EQGVRVIAEDAECP-------------------------VHVSGHPYPNDLKRMYQWIRP 385 +I +H SGH DL R+ + P Sbjct: 326 GISSTIIYSQWAGYLEEGTPQYNAKAASLKGRENSTFRLIHTSGHAVREDLMRLVGSVEP 385 Query: 386 QVLVAIHGEPLHLVA 400 Q ++ +H E + A Sbjct: 386 QTVIPLHTEHKNAYA 400 >gi|326426580|gb|EGD72150.1| cleavage and polyadenylation specificity factor subunit 3 [Salpingoeca sp. ATCC 50818] Length = 790 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 135/447 (30%), Gaps = 73/447 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD--LVFPDITFI 61 L PLG E+G + + + + IM+DCG+ PG+ P ++ I Sbjct: 49 NVLTITPLGAGQEVGRSCHILKFKGFT----IMLDCGI------HPGLKGKASLPFVSQI 98 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + ITH H DH GAL L V+ +P + I Sbjct: 99 ELN--KIDLVLITHFHLDHCGALPWLLERSTFSGRVFMTPATKAIYRWILEDYVRVSNIS 156 Query: 120 CI-----------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + ++ H + I +V+ Sbjct: 157 NFAEMYSLEDVENSLAKIETISYHQETNMDGVRFTPYCAGH-VLGACMFDIEIAGVRLVY 215 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDI 220 TGD+ ++D L + L+ +ST +R+ E K I+D+ Sbjct: 216 TGDFSREEDRHLMA-------AEVPPNSPDILITESTFGVRQHESRQTREHRFTKTIHDV 268 Query: 221 MKNAKGCVL-----------------VTTFSSSVSRI------RSIIDIAEQIGRKIVLL 257 + C++ + R+ + ++ Sbjct: 269 VDRGGRCLIPVFALGRAQELLLILDDYWQNHDELHRVPIYYASALARRCMAVYKTYVNVM 328 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S+++ +S+ + + G Y +++A+ P + LSR Sbjct: 329 KESIQKTISINNPFNFRHVSYIRNLHQFDGEYGGGPCVMLAS-----PGMLQSGLSREIF 383 Query: 318 RNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPND 375 + + V+ + + G + ++ + + E + S H Sbjct: 384 ERWASNKANCVLLAGYVVNGTLAKDLLKAPKKVTSEAGHKIDRECDIAYISFSAHVDYAQ 443 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + + + P +V +HGE + K Sbjct: 444 NRDFIRALDPTHIVLVHGEKHEMGRFK 470 >gi|295111991|emb|CBL28741.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Synergistetes bacterium SGP1] Length = 386 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 72/413 (17%), Positives = 129/413 (31%), Gaps = 86/413 (20%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDIT 59 KNE+ P+GG EIG + G +++D G+ F P P + + Sbjct: 4 KNEKYKMFPIGGGDEIGASCYAVQMGGER----VLLDAGIRFGAPFGSFPSL------LA 53 Query: 60 FIMKERKN----LMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYE-- 112 F+ K + L A+ I+HAH DH GAL L L VPVY+SP + L+ Sbjct: 54 FLKKWDMDGLWELSAVIISHAHLDHMGALPTLLDELGTVPVYSSPATLDLMRTYYENFEQ 113 Query: 113 ------------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 R++ I G + +I H IP ++ + Sbjct: 114 RSPASSGRNIAVRLAATDRLIPKPYGTTIQTKELNITLFPAGH-IPGAAMTLLEDGERRV 172 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD+ D + L+C+ T R + + Sbjct: 173 LYTGDF-CDFAQHTVGA------AEFPQTKVDTLICECTCGYRNRSSEGRNNVG------ 219 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 + R+ +++D G + S+ R +A + Sbjct: 220 ---------------LMQRLNALLDE----GSLVECRVRSIGRAAELAGVLRECANRGEM 260 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV 340 + + E + +LS R + I +S A G Sbjct: 261 PDVDIWVDPDCEAECRVCERWGNPVFKGRVKLS---DRMPVRGMRGVRIHASPASCGG-- 315 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 +++R + H + + + +RP ++ +HG Sbjct: 316 --RRVEDRELGLF---------------NHAGCSGILNLIAHVRPTKVILVHG 351 >gi|260893007|ref|YP_003239104.1| RNA-metabolising metallo-beta-lactamase [Ammonifex degensii KC4] gi|260865148|gb|ACX52254.1| RNA-metabolising metallo-beta-lactamase [Ammonifex degensii KC4] Length = 520 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 79/506 (15%), Positives = 145/506 (28%), Gaps = 127/506 (25%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----------------PGVDLVFP 56 G G IG N L + +D G +F + L V + P Sbjct: 10 GTGCIGGNKILLE----DEGIGLFLDFGTNFGAEGLFFDEFLRPRATFGLADLLVLNILP 65 Query: 57 --------DITF--IMK--------ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS 98 D+ + + + + I ++HAH DH G L L VPV + Sbjct: 66 PLKGLYRSDLEYPGLWEKYSAHPWFREVEIRGILLSHAHFDHCGYLTYLRP--DVPV-LT 122 Query: 99 PFAIGLLEAKRV-------------------------YERVSKKIPCISFQAGDKVD--- 130 L R + G+ + Sbjct: 123 SLTTALATKALQDTSSSQVELCYITPRELKDGLLRATDYRSVPHQQRPFWVPGESIPEEA 182 Query: 131 --------------------------VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 +G F + V+HSIP A +++ G +V+TG Sbjct: 183 HGFWEKAVTSRRLCSQPLKACSSEAELGPFRVRLFPVDHSIPGAGAFAVKTSAGWVVYTG 242 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D +L + +L R E+ + N ++++K A Sbjct: 243 DLRLHGKQAHLTRQFMQEAARL-KPKVLICEGTHPEVERPVH---EQEVAANCFEVVKKA 298 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 +G V+ +V R+ S ++IA + R + L + ++ G Sbjct: 299 EGLVIADFGPRNVERLLSFLEIAGETERLLTLTPKDIY-LLEALRAAGEPGIPDPMTDQR 357 Query: 285 SFGLY-------PREQLIVIATGSQGEPR-------------SALAQLSRGEMRNVKLAE 324 P E+ ++ G + R L + + Sbjct: 358 VALYVRPKALRKPWEEELIARFGERAPERLIDAARVKFAPQDFILCFSYYDFHALLDIEP 417 Query: 325 -KDTVIFSSRAIPGNEV-----AIGHIKNRL-VEQGVRVIAEDAECPVHVSGHPYPNDLK 377 T I+SS E+ + + N + + H SGH + ++ Sbjct: 418 EGGTYIYSSSEAYDEEMLMDHERVRNWINFFGFRLYGTLGRDRERSGFHASGHIHGPGIE 477 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKE 403 + + ++P+VL+ +H E E Sbjct: 478 ELVETVKPEVLIPVHTENREFFRRFE 503 >gi|309365578|emb|CAP22839.2| CBR-CPSF-3 protein [Caenorhabditis briggsae AF16] Length = 727 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 88/251 (35%), Gaps = 41/251 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ L F PLG E+G + L Y K +M+DCGV L GVD P + F+ Sbjct: 7 NSDALSFTPLGSGQEVGRSCHLLEY----KGKRVMLDCGV---HPGLHGVDA-LPFVDFV 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 +N+ + ITH H DH GAL L + + + Sbjct: 59 E--IENIDLLLITHFHLDHCGALPWLLQKTAFRGKCFMTHATKAIYRMLLGDYVRISKYG 116 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + K + I ++ +V H + +I + Sbjct: 117 GADRNQLYTEDDLEKSMAKIETIDFREQKEVNGIRFWPYVAGH-VLGACQFMIEIAGVRV 175 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIY 218 ++TGD+ +D L I L+ +ST + S EK + ++ Sbjct: 176 LYTGDFSCLEDRHLCA-------AEIPPVSPQVLITESTYGTQTHEDRSVREKRFTQMVH 228 Query: 219 DIMKNAKGCVL 229 DI+ C++ Sbjct: 229 DIVTRGGRCLI 239 >gi|195062087|ref|XP_001996130.1| GH14325 [Drosophila grimshawi] gi|193891922|gb|EDV90788.1| GH14325 [Drosophila grimshawi] Length = 597 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYAGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|12053137|emb|CAB66747.1| hypothetical protein [Homo sapiens] gi|49065540|emb|CAG38588.1| FLJ20542 [Homo sapiens] gi|117645260|emb|CAL38096.1| hypothetical protein [synthetic construct] gi|208966056|dbj|BAG73042.1| cleavage and polyadenylation specific factor 3-like [synthetic construct] Length = 600 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHSTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPANG 441 >gi|91772173|ref|YP_564865.1| beta-lactamase-like [Methanococcoides burtonii DSM 6242] gi|91711188|gb|ABE51115.1| metallo-beta-lactamase family RNA-degradation protein [Methanococcoides burtonii DSM 6242] Length = 411 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 71/425 (16%), Positives = 144/425 (33%), Gaps = 76/425 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + L I++D G+ ++ L VD V P A+ Sbjct: 7 GGCREVGRSALLV-------NDEILVDYGLKPGEEPLYPVDYVHP------------KAV 47 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSK--------- 116 I+H H DH GA+ +L + ++ +P L + K + Sbjct: 48 LISHGHLDHCGAVPNLM-DMDPELFMTPPTADLAQVLAKDTLKIAEREGTSIPFDEREIQ 106 Query: 117 --KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + +F G + ++ + H IP + A+ + +IV+TGD + ++ Sbjct: 107 QMVLNTRTFDTGVEFHTHGYTAQFYNAGH-IPGSSAIYLEKDGKSIVYTGDISTQETYLV 165 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 A AL+ +ST +E+ ++ D + G V++ Sbjct: 166 P--------SADELPEADALITESTYFGEDHPTRKETEREFIDSLRDTIDLG-GNVIIPA 216 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ---------LFLSD 283 F+ + R + ++ + G + G ++ + +K + + Sbjct: 217 FA--IGRTQEVLMMLSDNGIPAYVDGMGVRIYKLLMNHPEYLKDPEKLKHAFDNATIVKG 274 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIG 343 P +++ T L ++R + K ++ + + G + Sbjct: 275 RKRENIPLNGTVIVTTAGMLNGGPVLHYINR-----LYTDPKSKIMLTGYQVEGTNGRMA 329 Query: 344 ----HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ---VLVAIHGEPL 396 +I N + Q +R+ E + S H +LK M + + A+HGE Sbjct: 330 LDTGNIDNDGIIQNIRMKIEQYDF----SAHSGDKELKAMVSEFCDKGGEKVFAMHGENT 385 Query: 397 HLVAH 401 A Sbjct: 386 EQFAQ 390 >gi|32566029|ref|NP_502553.2| Cleavage and Polyadenylation Specificity Factor family member (cpsf-3) [Caenorhabditis elegans] gi|26985920|emb|CAC44310.2| C. elegans protein Y67H2A.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 707 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 78/455 (17%), Positives = 144/455 (31%), Gaps = 59/455 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ L F PLG E+G + L Y K +M+DCGV L GVD P + F+ Sbjct: 7 NSDSLCFTPLGSGQEVGRSCHLLEY----KGKRVMLDCGV---HPGLHGVDA-LPFVDFV 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 +N+ + ITH H DH GAL L + + + Sbjct: 59 E--IENIDLLLITHFHLDHCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYG 116 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + K + I ++ +V H + +I + Sbjct: 117 GPDRNQLYTEDDLEKSMAKIETIDFREQKEVNGIRFWPYVAGH-VLGACQFMIEIAGVRV 175 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIY 218 ++TGD+ +D L I L+ +ST + + EK + ++ Sbjct: 176 LYTGDFSCLEDRHLCA-------AEIPPITPQVLITESTYGTQTHEDRAVREKRFTQMVH 228 Query: 219 DIMKNAKGCVL----VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGI 273 DI+ C++ + + + + +++ V SSL + +SV Sbjct: 229 DIVTRGGRCLIPAFAIGPAQELMLILDEYWESHQELHDIPVYYASSLAKKCMSVYQTFVN 288 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 ++ + + + + Q E P + SR + Sbjct: 289 GMNSRIQKQIAVKNPFIFKHVSTLRGMDQFEDAGPCVVLATPGMLQSGFSRELFESWCPD 348 Query: 324 EKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ I + + G I +V + V S H + + Sbjct: 349 TKNGCIIAGYCVEGTLAKHILSEPEEIVSLSGEKLPMRMQVGYVSFSAHTDYHQTSNFVK 408 Query: 382 WIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPP 415 ++P LV +HGE + Q +P Sbjct: 409 ALKPPHLVLVHGELHEMSRLKSGIERQFQDDNIPI 443 >gi|189423102|ref|YP_001950279.1| beta-lactamase [Geobacter lovleyi SZ] gi|189419361|gb|ACD93759.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 422 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 78/422 (18%), Positives = 148/422 (35%), Gaps = 71/422 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G EIG + I++D G+ + P + + A+ Sbjct: 8 GSHEIGGTC----IRISTETISILLDAGLPLAANSQP-----------LTEADLAADALI 52 Query: 73 ITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEA-KRVYERVSKKIPCISFQAGDKV 129 I+H+H+DH G L + +PVY A GLL A + + A Sbjct: 53 ISHSHQDHCG----LLDTIPSSMPVYIGKVAKGLLNATRLFLGHPLLANDFRTIDAWLPF 108 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 VG +I ++HS + ++ + + +TGD++ + L + Sbjct: 109 SVGDITITPYLMDHSATDAYGFIVEAEGKRLFYTGDFR----GHGRKSVLFEKLLNKPPQ 164 Query: 190 GILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I ++ + T R+ + S EK ++ I +I++ + + + S ++ RI S + Sbjct: 165 NIDLMLMEGTMLQRDNSSFSDEKSVETEIANILRKQRNISFLISSSQNIDRIVSAYRACK 224 Query: 249 QIGRKIVLLGSS---LKRVVSVAIDVGIIKKDQLFLSDESFGL----YPREQLIVIATGS 301 G+ +VL S L++V V+ I D + + + P + + + Sbjct: 225 FTGKTLVLDIYSAWVLEQVRQVSQGTPTIDWDSIGVVFDKRKSSVLFDPANRGMFGDFIN 284 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSS---------------------------RA 334 Q + ++ GE+R + SS + Sbjct: 285 Q----AVSNRIKGGELRTHPAKYLMLLKVSSASLIFKFACEEEPTTVIYSQWQGYLAPKP 340 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + V GVR + H SGH DL+R+ + ++P+ LV +H E Sbjct: 341 EEAIHTQVMRSIKDEVRPGVRYVYA------HTSGHAPVEDLQRLVKAVKPRQLVPVHTE 394 Query: 395 PL 396 Sbjct: 395 FP 396 >gi|195394529|ref|XP_002055895.1| GJ10637 [Drosophila virilis] gi|194142604|gb|EDW59007.1| GJ10637 [Drosophila virilis] Length = 597 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 -CVSKGGKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKHVMLVHGEAEKMK 421 >gi|298528505|ref|ZP_07015909.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] gi|298512157|gb|EFI36059.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] Length = 415 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 67/401 (16%), Positives = 139/401 (34%), Gaps = 31/401 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + + I++D G+ P D + P + + +L+ +F Sbjct: 8 GSNQIGGSCVEIE----QDGQRIILDIGL--PLDSESNDKALLPLVKGLDGSDPSLLGVF 61 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK---RVYERVSKKIPCISFQAGDKV 129 ++H H DH G L + S + V S A + + ++ + Sbjct: 62 LSHTHLDHTGLLKHISSEIKV---GSGPAARRIMDAALPFLPDKFPPIPDGWEYDPWKSF 118 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 VG F I V+HS + AL+I + + ++GD++ Sbjct: 119 QVGPFKITPYLVDHSAYDAYALLIEAGGKRLFYSGDFRGHGRKAKLFQNVL----KSPPR 174 Query: 190 GILALMCDS---TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 I L+ + +E SE I+ + + N +G +V +V R+ SI+ Sbjct: 175 NIDVLLMEGSTLGRIDQELRFPSETDIENELVEAFSNTQGLAMVHASGQNVDRVVSIMRA 234 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIK---KDQLFLSDESFGLYPREQLIVIATGSQG 303 +++ R +++ + ++ + I + + L ++ + Sbjct: 235 SKRTNRILLIDLYTAV-ILEATQNKNIPQSHWPEMALLVPQAQRVQILNNSWFDKLKRHS 293 Query: 304 EPRSALAQLSRGEMRN--------VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 R + ++ + + K K + + I + + Sbjct: 294 SNRVFMEKVKQNPDKYTLLFRPLFTKDLNKGECLKGASYIYSQWEGYWERGDYDYVKDWL 353 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 I ++ +H SGH P+DLK + Q + P +V IH Sbjct: 354 NIHGISKQSIHTSGHAAPSDLKALVQALNPGKVVPIHSYMP 394 >gi|330796066|ref|XP_003286090.1| hypothetical protein DICPUDRAFT_30371 [Dictyostelium purpureum] gi|325083909|gb|EGC37349.1| hypothetical protein DICPUDRAFT_30371 [Dictyostelium purpureum] Length = 468 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 69/466 (14%), Positives = 146/466 (31%), Gaps = 67/466 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + +PLG ++G + + G+ + IM DCG+ D + FPD ++I K Sbjct: 1 MTIKVVPLGAGQDVGRSCVIVTIGNKN----IMFDCGMHMGYYD----ERRFPDFSYISK 52 Query: 64 ER---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV---- 114 + K + + ITH H DH GAL P+Y + + R Sbjct: 53 NKQFTKIIDCVIITHFHLDHCGALPYFTEMVGYDGPIYMTLPTKAITPILLEDYRKITVD 112 Query: 115 -SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNI 160 + Q I+ + + + ++ Sbjct: 113 RKGDTNFFTPQMIKDCMKKVIPIDLHQTIKVDEELSIKAYYAGHVLGAAMFYAKVGDESV 172 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 V+TGD+ + D LG I L+ ++T A R+ E+ K ++ Sbjct: 173 VYTGDYNMTPDRHLGS-------AWIDQVKPDVLITETTYATTIRDSKRGRERDFLKRVH 225 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSII-------DIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + G VL+ F+ + R++ + + I ++ Sbjct: 226 E-CVEKGGKVLIPVFA--LGRVQELCILIDSYWEQMNLSHVPIYFSAGLAEKANLYYKLF 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVI- 329 ++ + ++ + + + P + L L Sbjct: 283 INWTNQKIKQTFVKRNMFDFKHIKPFQSHLVDAPGAMVLFATPGMLHAGASLEVFKKWAP 342 Query: 330 --FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE-----------CPVHVSGHPYPNDL 376 + IPG +G + N+L+ + + + S H + Sbjct: 343 NELNMTIIPGY-CVVGTVGNKLLANNAGSQMVEIDKKTTLEVKCKIHNLSFSAHADAKGI 401 Query: 377 KRMYQWIRPQVLVAIHGEPLHL-VAHKELALQEGIACVPPVRNGKM 421 ++ + P+ ++ +HGE + +++ + G+ C P + Sbjct: 402 LQLIKMSNPRNVILVHGEKEKMGFLSQKIIKEMGVNCYYPANGVTI 447 >gi|110667095|ref|YP_656906.1| mRNA cleavage and polyadenylation specificity factor-like protein [Haloquadratum walsbyi DSM 16790] gi|109624842|emb|CAJ51251.1| mRNA cleavage and polyadenylation specificity factor homolog [Haloquadratum walsbyi DSM 16790] Length = 410 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 61/428 (14%), Positives = 139/428 (32%), Gaps = 82/428 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG E+G + L +++D G+ ++ PD Sbjct: 1 MDIRF--LGGAEEVGRSAILI-------NDRLLLDYGMLTGNPPQFPIETPRPD------ 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFA----IGLLEAKRVYERVSKKI 118 A+ ++H H DH GA+ L S P++ + + L + Sbjct: 46 ------AVVVSHGHLDHVGAIPSLLSGDRRPPIHWTAPTQELALTLARDTLKLHGGTYDC 99 Query: 119 PCI------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P + + DV SI H IP + ++I + +T D+ Sbjct: 100 PFTQEELHRVTQVSETHGYRETFDVADHSITFYNAGH-IPGSAHVLIDDGDTRLFYTADF 158 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK- 225 ++ ++ + ++C+ST + + K I+ + ++ Sbjct: 159 HTENQRLVS--------ASTARPEADVVICESTYSDVQH--DPRKQIETRFVESVRTTMW 208 Query: 226 --GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-----SLKR----VVSVAIDVGII 274 G V+V F+ + R + ++ + + G + + + +G Sbjct: 209 QGGTVIVPAFA--IGRTQELLLVCAANNIDCYVDGMGKQVTKMLKEHPQFIRGEEALGHA 266 Query: 275 KKDQLFLS--DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 K + F++ D + +++ T A+ + ++ + + + Sbjct: 267 KSNARFVTGRDGQRKRIAEQNTVIVTTSGMLSGGPAMTYI-----PEIRSNPTNKITLTG 321 Query: 333 RAIPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + G E I +R++ +V D S H + L + + Sbjct: 322 YQVEGTPGRSLLETGRAEINDRIMPISAQVEWYD------FSAHADKDGLMELLNEYKDT 375 Query: 387 VLVAIHGE 394 ++ HG+ Sbjct: 376 RVLINHGD 383 >gi|195503187|ref|XP_002098546.1| GE23879 [Drosophila yakuba] gi|194184647|gb|EDW98258.1| GE23879 [Drosophila yakuba] Length = 597 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|313125202|ref|YP_004035466.1| exonuclease of the beta-lactamase fold involved in RNA processing [Halogeometricum borinquense DSM 11551] gi|312291567|gb|ADQ66027.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Halogeometricum borinquense DSM 11551] Length = 436 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 136/454 (29%), Gaps = 101/454 (22%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N ++ F LGG E+G + L +++D G+ VD PD Sbjct: 7 SNMDIRF--LGGAREVGRSAILV-------NDRLLLDYGMLTGNPPQFPVDTPEPD---- 53 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIG----LLEAKRVYERVSK 116 A+ ++H H DH GA+ L S P++ +P L +S Sbjct: 54 --------AVVVSHGHLDHVGAVPSLLSGDRRPPIHWTPPTRELALTLARDTLKLRGISG 105 Query: 117 K-----------------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + + + + + H IP Sbjct: 106 RGATGGSQGQRRRGGTYDCPFTEEEIRRVTQVSETHSYRETFEAAGHEVTFYNAGH-IPG 164 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + ++I + +T D+ DD ++ + ++C+ST + E Sbjct: 165 SAHVLIDDGDTRLFYTADFHTDDQRLVS--------ASTARPDADVIICESTYSDVEHER 216 Query: 208 ISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 + I+K + ++ A G V++ F+ + R + ++ + + G + + Sbjct: 217 R--QRIEKRFVESVRTAVWEGGTVVIPAFA--IGRTQEMLLVCAANDIDCYVDG--MGKQ 270 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 V+ + + +++ V Q + + + Sbjct: 271 VTKMLRRH----PEFVRDEDALRRAKSNARFVTGRDGQRRRIAKQNTVIVTTSGMLSGGP 326 Query: 325 KDTVIFSSRAIPGN------------------EVAIGHIKNRLVEQGVRVIAEDAECPVH 366 T + R+ P N E I R++ +V D Sbjct: 327 AMTYVPEIRSNPTNKITLTGYQVEGTPGRDLLERGRAEIDERVMPVSAQVEWYD------ 380 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 S H + L + R ++ HG+ L A Sbjct: 381 FSAHADRDGLLELLSAYREAPILVNHGDRCELFA 414 >gi|150390866|ref|YP_001320915.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950728|gb|ABR49256.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 430 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 74/411 (18%), Positives = 154/411 (37%), Gaps = 37/411 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFI-MKERKNLM 69 G +IG + + R I++D G P D+ FP + + ++ K + Sbjct: 21 GAKQIGGSCTEV----FTERTRIILDIGQELPNIDDEKLKKPSSFPRVKGLYREDDKKID 76 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF-QAGDK 128 AI I+H H DH G L + +P++ A+ + + +++ ++G + Sbjct: 77 AILISHGHGDHIGLLEYV--DTDIPIFIGEKALEIFNVTAQFTGGKSIANPVNYFKSGQE 134 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + +G FSI V+HS + VI++ IV+TGD++ + Sbjct: 135 MTIGDFSITPYLVDHSGFDAYGFVIKADGKCIVYTGDFRDHGRKKKATDC----FRSNIP 190 Query: 189 EGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 +G+ AL+ + T R +E+ I++ ++ M + V V S+++ R+ + A Sbjct: 191 KGVDALLIEGTMMSRISEKIETEEQIEQKAFEFMSSPNRPVFVLQSSTNIDRLVGMYRAA 250 Query: 248 EQIGRKIVLLGSSLK---RVVSVAIDVGIIKKDQLFLSDESFGLY-----------PREQ 293 + GR V+ + ++ + G K ++F + Sbjct: 251 QISGRIFVMDIFTAHIVSQLNNTIPKPGKFKDVRVFYPYHLTKRMFEELKEEKLMKQFNR 310 Query: 294 LIVIATGSQGEP-RSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 + L + + ++K + IFS + + + Sbjct: 311 NWISREELGKRSDYCMLIRNTMLSDLEHIKNLQGAGFIFSMWRGYKKQRRTDRLLDYAKN 370 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + +I +H SGH + + LK++ + + ++ IH E L A Sbjct: 371 NNMDII------DLHTSGHAHIDSLKKVIRSSGAKKIIPIHTERSDLFAEA 415 >gi|262067401|ref|ZP_06027013.1| putative metallo-beta-lactamase domain protein [Fusobacterium periodonticum ATCC 33693] gi|291378964|gb|EFE86482.1| putative metallo-beta-lactamase domain protein [Fusobacterium periodonticum ATCC 33693] Length = 399 Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats. Identities = 64/395 (16%), Positives = 143/395 (36%), Gaps = 36/395 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG ++ S I++D G + + +V P+I + K + + Sbjct: 8 GQNQIGGSI----IEVSSKSTKIILDIGSNLEDKE-----IVVPEIDGLFKGKAKYDGVL 58 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 I+H H DH G + + +Y + + + Y F+A ++ +G Sbjct: 59 ISHYHSDHVGLATRILPEIQ--IYMGEKSYEIYKVSNEYMGKEYLKEPKIFKAEEEFFIG 116 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I +HS ++ ++ +++TGD++ G + + L + + Sbjct: 117 DIKITPYLCDHSAFDSYMFLLDCEGKRMLYTGDFRS-----NGRKSFEPLLRKLPK--VD 169 Query: 193 ALMCDSTNAMRE---GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L+ + TN ++EK ++K ++++ V V ++++ RI + IA Sbjct: 170 VLITEGTNLSNNKIGKINLTEKELEKKGIELLEGNDRPVFVLMAATNIDRIVTFYKIANA 229 Query: 250 IGRKIVLLGSS-LKRVVSVAIDVGIIKKDQLFLSDESFGLY----PREQLIVIATGSQGE 304 R +L + L + + + Y ++ + G Sbjct: 230 TKRLFLLDTYAGLITDTIGGNIPNPGTFSNVRMFLTNQNKYEILENYKKNKIGRKGIVNS 289 Query: 305 PRSALAQLSR----GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + S E T+ +S E + + E+GV++I+ Sbjct: 290 NFMMCVRSSMKQYLENYPEGFSFEGCTMFYSMWEGYKKEKNMKEFLEFMEEKGVKIIS-- 347 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 +H SGH D ++ + + P++++ +H E Sbjct: 348 ----LHTSGHAEEKDFDKLIKKVEPKIIIPVHTEN 378 >gi|321461562|gb|EFX72593.1| hypothetical protein DAPPUDRAFT_308207 [Daphnia pulex] Length = 689 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 76/502 (15%), Positives = 153/502 (30%), Gaps = 64/502 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ LV PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 14 ESDLLVIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + + I+H H DH GAL + + + I Sbjct: 66 E--ADQIDLLLISHFHLDHCGALPWFLQKTTFKGRCFMTHATKAIYRWLLSDYIKVSNIS 123 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 ++ DVG + H + +I +++ Sbjct: 124 TDQMLYTEADLEASMEKIEVINFHEEKDVGGVRFWAYNAGH-VLGAAMFMIEIAGVKVLY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I L+ +ST ++ + + + Sbjct: 183 TGDFSRQEDRHLMA-------AEIPTVRPDILITESTYGTHIHEKREDRESRFTGLIHEI 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 N G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 236 VNRGGRCLIPVFA--LGRAQELLLILDEYWSLHPELHEIPIYYASSLAQKCMAVYQTYIN 293 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + + Q E P + LSR Sbjct: 294 AMNDKIRRQIAINNPFIFKHISSLKGIDQFEDVGPCVIMASPGMMQSGLSRELFEAWCTD 353 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ I + + G + + ++ G ++ + + + S H + Sbjct: 354 PKNGCIIAGYCVEGTLAKHVLSEPEDITSMAGQKLPMKLSVDYISFSAHTDYQQTSEFIR 413 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQE----GIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 ++P +V +HGE + K ++E + + V Sbjct: 414 LLKPPHVVLVHGEANEMNRLKAALIREYEHDPDTQIRIYNPRNTAAVELHFKGEKTAKVM 473 Query: 438 GLFLKDGFLIGKFADLGIAKRR 459 G + + G+ + KR Sbjct: 474 GSLAFEKPVEGQIISGVLVKRN 495 >gi|194906134|ref|XP_001981318.1| GG11690 [Drosophila erecta] gi|190655956|gb|EDV53188.1| GG11690 [Drosophila erecta] Length = 597 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGFND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|73956491|ref|XP_536711.2| PREDICTED: similar to related to CPSF subunits 68 kDa isoform 1 isoform 1 [Canis familiaris] Length = 600 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 144/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 AVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 441 >gi|158298905|ref|XP_319042.4| AGAP009923-PA [Anopheles gambiae str. PEST] gi|157014111|gb|EAA13845.4| AGAP009923-PA [Anopheles gambiae str. PEST] Length = 608 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 150/446 (33%), Gaps = 60/446 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L + IM+DCG+ +D + FPD +FI+ E Sbjct: 3 DIKITPLGAGQDVGRSCILLSMAGKN----IMLDCGMHMGYND----ERRFPDFSFIIPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITNHIDCVIISHFHLDHCGALPYMTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + IR ++V Sbjct: 115 KGESNFFTPQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWIRVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCKPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E + ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPVYFAVGLTEKANNYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + G P + + A LS + E Sbjct: 285 WTNQKIRKTFVQRNMFDFKHIKPFDKGYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + + + S H + ++ Q+ Sbjct: 345 NNMVIMPGYCVQGTVGHKILGGAKKVEFENRQVVDVKMSVEYMSFSAHADAKGIMQLIQF 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQE 408 P+ ++ +HGE + + KE +E Sbjct: 405 CEPRNVMLVHGEAVKMEFLKEKIREE 430 >gi|194765324|ref|XP_001964777.1| GF23370 [Drosophila ananassae] gi|190615049|gb|EDV30573.1| GF23370 [Drosophila ananassae] Length = 597 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 143/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK- 63 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPD 54 Query: 64 --ERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWDRMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|256086716|ref|XP_002579538.1| cleavage and polyadenylation specificity factor-related [Schistosoma mansoni] gi|238664985|emb|CAZ35777.1| cleavage and polyadenylation specificity factor-related [Schistosoma mansoni] Length = 670 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 68/483 (14%), Positives = 147/483 (30%), Gaps = 76/483 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---KDDLPGVDLVFPDI 58 ++++L +PLG E+G + L + K I++DCG+ ++ LP +D PDI Sbjct: 9 ESDKLTIMPLGAGQEVGRSCILLTF----KGKKIILDCGIHPGLRNRESLPFIDA-IPDI 63 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYE---- 112 I I+H H DH G L L Y + + Sbjct: 64 Q-------TTDLILISHFHLDHCGGLPHLLLKTGAKSKCYMTHATKAIYRYLLADFVRVS 116 Query: 113 ---RVSKKIPCI------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + ++ + +++V + H + +I Sbjct: 117 NSGGLPDQLLYSDRDIVASLDHIDTIDFHQELEVNGIKFSAYHAGH-VLGAAMFLIEIAG 175 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KN 216 I++TGD+ +D L I L+ ++T + E+ + + Sbjct: 176 VKILYTGDFSRQEDRHLMC-------AEIPPIRPDVLITEATYGIHIHDKREEREARFTS 228 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---------------------GRKIV 255 + + G L+ F+ + R + ++ I ++ + Sbjct: 229 LVHDIVTRGGRCLIPAFA--LGRAQELMLILDEYWDNHPELHDIPIYYASQLARKCMAVY 286 Query: 256 LLG-SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 ++ + + + + +S + V+ P + LSR Sbjct: 287 QTYIYAMNERIRNQLASNNPFCFRHISNLKSIEHFDDSGPCVV----MASPGMMQSGLSR 342 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRV-IAEDAECPVHVSGHPY 372 N +++ VI + + G I + + ++ + + + S H Sbjct: 343 ELFENWCTDKRNGVIIAGYCVEGTLAKQILSLPTEVPTMSGQMLPLKCSVDYISFSAHTD 402 Query: 373 PNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEI 431 + ++P +V +HGE L L + + P + Sbjct: 403 YQQTSAFIRELKPSYVVLVHGEQNEMLRLCGALQREYEDDETCRLEIFTPKNCVPVNLRF 462 Query: 432 IDE 434 E Sbjct: 463 RGE 465 >gi|73956501|ref|XP_856205.1| PREDICTED: similar to related to CPSF subunits 68 kDa isoform 1 isoform 6 [Canis familiaris] Length = 578 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 144/450 (32%), Gaps = 68/450 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 168 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHEAVERG-GKVLIPVFA-- 219 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 220 LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFE 279 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI- 345 + + P + V S R GNE + + Sbjct: 280 FKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMP 329 Query: 346 ---------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + +L +G +V+ + + S H + ++ P+ ++ Sbjct: 330 GYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVL 389 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +HGE + K+ QE NG Sbjct: 390 LVHGEAKKMEFLKQKIEQEFRVNCYMPANG 419 >gi|212223311|ref|YP_002306547.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus onnurineus NA1] gi|212008268|gb|ACJ15650.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus onnurineus NA1] Length = 648 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 86/479 (17%), Positives = 166/479 (34%), Gaps = 86/479 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVF 55 +K+E + LGG E+G + L ++ ++++D GV+ PK P D Sbjct: 181 LKSEWIRITGLGGFREVGRSALLV----QTNESYVLVDFGVNIAALRDPKKAFPHFDA-- 234 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL--------- 104 P+ +++ L AI ITHAH DH G L L+ + P+Y +P L Sbjct: 235 PEFRYVLD-AGLLDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMVLLQQDFI 293 Query: 105 -LEAKRVYERVSKKI-------PCISFQAGDKVDVGAFSIESVRVNHSIPETM--ALVIR 154 ++ E + + I+ G+ D+ ++ I + L I Sbjct: 294 EIQQMNGVEPLYRPRDIKEVIKHTITLDYGEVRDIAPDMRLTLHNAGHILGSSIVHLHIG 353 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 + + NI TGD+K + + L+ +ST + + + Sbjct: 354 NGLHNIAITGDFKFIPTRLFEPA--VSRFPRL-----ETLVMESTYGGSNDHQMPREEAE 406 Query: 215 KNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLKRVVSV 267 K + +++ KG VL+ + V R + I+ + E+ G ++ + L ++ Sbjct: 407 KRLIEVIHQTIRRKGKVLIPAMA--VGRAQEIMMVLEEYARVGGIEVPIY---LDGMIWE 461 Query: 268 AIDVGIIKKDQLFLSDESFGLYP----------------REQLIVIATGSQGEPRSALAQ 311 A + + L + RE+ +I +G + Sbjct: 462 ATAIHTAYPEYLSRHLREQIFHEGYNPFLNPIFKPVANSRERQDIIDSGEPAIIIATSGM 521 Query: 312 LSRG----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAED 360 L G + + K+++IF S G + + + V + + Sbjct: 522 LVGGPSVEYFKQLAPDPKNSMIFVSYQAEGTLGRQVQRGLREIPLVGEGGKTEVVKVNME 581 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP HK+ + Sbjct: 582 VHTIDGFSGHADRRELISYIARLRPRPERIITVHGEPHKCLDLSTSIHKKFGISTRAPN 640 >gi|195341281|ref|XP_002037239.1| GM12816 [Drosophila sechellia] gi|195574829|ref|XP_002105386.1| GD21460 [Drosophila simulans] gi|194131355|gb|EDW53398.1| GM12816 [Drosophila sechellia] gi|194201313|gb|EDX14889.1| GD21460 [Drosophila simulans] Length = 597 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKNYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAGKMK 421 >gi|207079923|ref|NP_001128922.1| DKFZP459J1110 protein [Pongo abelii] gi|56403907|emb|CAI29738.1| hypothetical protein [Pongo abelii] Length = 600 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 143/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYVTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITGSTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANG 441 >gi|21312614|ref|NP_082296.1| integrator complex subunit 11 [Mus musculus] gi|81904239|sp|Q9CWS4|INT11_MOUSE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein gi|12845859|dbj|BAB26928.1| unnamed protein product [Mus musculus] gi|26355309|dbj|BAC41135.1| unnamed protein product [Mus musculus] gi|74192536|dbj|BAE43054.1| unnamed protein product [Mus musculus] gi|74219576|dbj|BAE29558.1| unnamed protein product [Mus musculus] gi|123295162|emb|CAM18397.1| cleavage and polyadenylation specific factor 3-like [Mus musculus] gi|148683102|gb|EDL15049.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b [Mus musculus] Length = 600 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 134/447 (29%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKME 421 >gi|21358523|ref|NP_651721.1| CG1972 [Drosophila melanogaster] gi|7301822|gb|AAF56931.1| CG1972 [Drosophila melanogaster] gi|16768852|gb|AAL28645.1| LD08814p [Drosophila melanogaster] gi|220943570|gb|ACL84328.1| CG1972-PA [synthetic construct] gi|220953494|gb|ACL89290.1| CG1972-PA [synthetic construct] Length = 597 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAGKMK 421 >gi|159573072|emb|CAP19247.1| cleavage and polyadenylation specific factor 3-like [Mus musculus] Length = 578 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 67/430 (15%), Positives = 134/430 (31%), Gaps = 68/430 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 168 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 219 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 220 LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFE 279 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI- 345 + + P + V S R GNE + + Sbjct: 280 FKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMP 329 Query: 346 ----------------KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + +E + + + S H + ++ P+ ++ Sbjct: 330 GYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVL 389 Query: 390 AIHGEPLHLV 399 +HGE + Sbjct: 390 LVHGEAKKME 399 >gi|76559911|ref|NP_001029064.1| integrator complex subunit 11 [Rattus norvegicus] gi|119371245|sp|Q3MHC2|INT11_RAT RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein gi|75867808|gb|AAI05304.1| Cleavage and polyadenylation specific factor 3-like [Rattus norvegicus] Length = 600 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 134/447 (29%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKME 421 >gi|74198351|dbj|BAE39661.1| unnamed protein product [Mus musculus] Length = 600 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 134/447 (29%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKME 421 >gi|74220481|dbj|BAE31460.1| unnamed protein product [Mus musculus] Length = 600 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 134/447 (29%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQGNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 395 AKGIMQLVGQAEPESVLLVHGEAKKME 421 >gi|301788922|ref|XP_002929872.1| PREDICTED: integrator complex subunit 11-like [Ailuropoda melanoleuca] Length = 600 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 70/468 (14%), Positives = 144/468 (30%), Gaps = 82/468 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDD-AILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 +TGD+ + D + D+ L+ +ST A R+ E+ K ++ Sbjct: 175 YTGDYNMTPDRHLGAAWIDRCR--------PNLLITESTYATTIRDSKRCRERDFLKKVH 226 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 + ++ G VL+ F+ + R + + + I ++ Sbjct: 227 EAVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFI 283 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 ++ + ++ + + P + V S Sbjct: 284 TWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQS 333 Query: 333 ----RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHP 371 R GNE + + + +L +G +V+ + + S H Sbjct: 334 LQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHA 393 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 394 DAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 441 >gi|311258301|ref|XP_003127541.1| PREDICTED: integrator complex subunit 11-like [Sus scrofa] Length = 599 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 74/467 (15%), Positives = 145/467 (31%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L G + +M+DCG+ D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIGGKN----VMLDCGMHMGFSD----DRRFPDFSYITRH 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q A ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKAVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADSPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLELEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPENVLLVHGEAKKMEFLKQKIEQEFRLSCYMPANG 441 >gi|149024842|gb|EDL81339.1| similar to RIKEN cDNA 2410006F12 [Rattus norvegicus] Length = 601 Score = 119 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 134/447 (29%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 4 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 55 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 56 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 115 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 116 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 175 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 176 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 228 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 229 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIT 285 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 286 WTNQKIRKTFVQRNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQSL 335 Query: 333 ---RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHPY 372 R GNE + + + +E + + + S H Sbjct: 336 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHAD 395 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 396 AKGIMQLVGQAEPESVLLVHGEAKKME 422 >gi|150400464|ref|YP_001324230.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013167|gb|ABR55618.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 432 Score = 119 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 149/437 (34%), Gaps = 44/437 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GG E+G + S I++DCGV ++D + + + + + Sbjct: 1 MKILFRGGAMEVGRSC----IEVRSDNSIILLDCGVKLLEEDNNKNN----NPEYPVFNK 52 Query: 66 KNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASP----FAIGLLEAKRV----YERVSK 116 A+FI+HAH DH GAL L ++ P+Y++P LL+ Sbjct: 53 LYPNAVFISHAHLDHTGALPVLPHMKINCPIYSTPMTQDLTKELLKDSLKIGLMEHGQVP 112 Query: 117 KI---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS-PVGNIVHTGDW 166 + + F H IP + + + IV+TGD Sbjct: 113 FNKGDLKKEIRHHKDIEYKNMEQFRDFEFTYYDAGH-IPGSATIDLNYENGKRIVYTGDT 171 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 ++ ++ D + I AL+ +ST E K+ + + + + Sbjct: 172 RVSKTRLVN-GADLS----YCDNDINALIIESTYGGENHPDR-ELLEKEFLNKVKETVER 225 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVVSVAIDVGIIKKDQLFLS 282 + +V R + I+ + ++ + + G + +++ + +L + Sbjct: 226 GGVAIIPVFAVDRSQEILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSA 285 Query: 283 DESFGLYPREQLIVIA-----TGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIP 336 S ++ VI G L+ N + ++I + + Sbjct: 286 FLSTHKVKEDRKYVIEDLRENGGIIVSTAGMLSGGPVLNYIDNFWNDPRSSLILTGYQVK 345 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 I + + + + S H ++L+ + + P+ L+ HGE Sbjct: 346 NTAGRILLDTGKFPIGELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQHGEEE 405 Query: 397 HLVAHKELALQEGIACV 413 ++ KE A++ G + Sbjct: 406 SIMLFKEWAIENGFNTI 422 >gi|284161558|ref|YP_003400181.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011555|gb|ADB57508.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus DSM 5631] Length = 631 Score = 119 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 153/448 (34%), Gaps = 78/448 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + LGG E+G + L + I+++CG++ + P L P+I + Sbjct: 175 DKWVRVTFLGGAREVGRSCYLL----QTPNSKILVECGINVSGNQPPY--LYIPEIQPL- 227 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LE-AKRVYE 112 ++ A+ ITHAH DH G + L+ + PVY +P L +E A R Sbjct: 228 ---DSIDAVVITHAHLDHCGLVPVLFKYGYRGPVYLTPPTRDLMVLLQLDFIEVASREGT 284 Query: 113 RVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNIVH 162 + + I + + + H + +A I + NI Sbjct: 285 TIPYESHWIRTALKHCITLDYGVVTDIAPDVRLTFYNAGHILGSAIAHFHIGEGLYNIAF 344 Query: 163 TGDWKLDDDAI-LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + T+ L AL+ ++T + S K ++N+ I+ Sbjct: 345 TGDFKFERTRLFDKAETNFPRLE--------ALIMEATYGGSQDFQPSRKEAEENLIRIV 396 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 G VL+ F+ V R + ++ + E+ + + G + Sbjct: 397 NETISKGGKVLIPAFA--VGRSQEVMIVLEEAIRTKKIDEVPVYIDGMIYEATAIHTAYP 454 Query: 272 GIIKKDQLFLSDESFGLY-----------PREQLIVIATGSQGEPRSALAQLSRG----E 316 + L P ++ VI + S L+ G Sbjct: 455 EYLNAHLRDLIFHQGINPFISESFVRVDSPSKRQEVIDSSEPCVIISTSGMLNGGPVMEY 514 Query: 317 MRNVKLAEKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 R + EK+T++F G + + + V + E S Sbjct: 515 FRALAGDEKNTIVFVGYQAEGTLGRRIQKGWKEVPFTVDG--RREVVKVNMRVETVDGFS 572 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGE 394 GH L + + +P+ ++ +HGE Sbjct: 573 GHSDRRQLMNYVKALSDKPEKIITVHGE 600 >gi|195445135|ref|XP_002070189.1| GK11920 [Drosophila willistoni] gi|194166274|gb|EDW81175.1| GK11920 [Drosophila willistoni] Length = 597 Score = 119 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + E I ++ + Sbjct: 228 CVAKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E V + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKNVMLVHGEAEKMK 421 >gi|213693208|ref|YP_002323794.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524669|gb|ACJ53416.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459387|dbj|BAJ70008.1| putative beta-lactamase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 439 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 79/430 (18%), Positives = 146/430 (33%), Gaps = 58/430 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----PKDDLPGVDLV----F 55 ++ G+ IG N+ YG I+ DCG + PK DL+ Sbjct: 10 DKTRITFYRGIRTIGGNLIEVSYG----DSRIVFDCGCEYNPAAPKQPRDLADLISQGYV 65 Query: 56 PDITFIMKERKNL------------MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 P + I ++ A+F++HAH DH L+ + +PVYAS Sbjct: 66 PYLPAIFDRTIDVPGHHWSADPYAHSAVFVSHAHLDHSKMLNYI--DSAIPVYASQNTKR 123 Query: 104 LLEAKRVYERVSKKIPCISF---------QAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +LEA V + + V VG+ S+ + V+H L + Sbjct: 124 VLEAMNVNDDFDFPPYRKDCGHTRPITGVEPNGVVRVGSISVTVMPVDHDAYGASGLRVV 183 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REG-----TC 207 +P I +TGD + + N G AL+ + T+ + G Sbjct: 184 TPDAVIAYTGDIRFHGFLEHDTRAFLQA-----NAGADALIMEGTSISFRKPGDPVDRPE 238 Query: 208 ISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +E+ + I ++++ + + +++ RI+ II + + V Sbjct: 239 TTEQQVCDRIEALVRDNPHRQITFNYYLTNIERIQHIIVSSPRTVVLSAYAAFVYTSVTG 298 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + D+ + S +S P ++L Q L +R + Sbjct: 299 DPVHYYRLNDDRDYSSLDSTLEIPFDEL----LSDQDAYLWQLDDRARAAHLHDLRRNGL 354 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 V + + + A +Q V + + SGH + +RP+ Sbjct: 355 YVHTGAAPLGEYDPAYKPFFQGFADQDVEAVT------ISCSGHATVEKAFEIIDAVRPR 408 Query: 387 VLVAIHGEPL 396 +L +HGE Sbjct: 409 LLFPVHGEHP 418 >gi|193608339|ref|XP_001949326.1| PREDICTED: integrator complex subunit 11-like isoform 1 [Acyrthosiphon pisum] gi|328710634|ref|XP_003244318.1| PREDICTED: integrator complex subunit 11-like isoform 2 [Acyrthosiphon pisum] Length = 603 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 65/458 (14%), Positives = 137/458 (29%), Gaps = 61/458 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + ++ PLG ++G + L G + IM+DCG+ D + FPD ++I Sbjct: 4 SNRIIVTPLGAGQDVGRSCILITIG----NRNIMLDCGMHMGYQD----ERKFPDFSYIT 55 Query: 63 ---KERKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKK 117 + + I+H H DH GAL L L P+Y + + R Sbjct: 56 SDGNITDIIDCVIISHFHLDHCGALSYLTEHLGYHGPIYMTHPTKAIAPILLEDMRKHLV 115 Query: 118 IPCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGN 159 + + + VN + I+ + Sbjct: 116 EYEEEAKYFTSSAIRDCMKKVTAVNLHEVVTVKDDIELKAYYAGHVLGAAMFYIKVGNDS 175 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +V+TGD+ + D LG I L+ +ST A + + + Sbjct: 176 VVYTGDFSMTPDRHLGA-------AWIDKCRPTLLITESTYA-TTIRDSKRCRERDFLKN 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + + V ++ R + + + + + ++ S Sbjct: 228 VHECIDRGGKVLIPIFALGRAQELCILIDTYWDRMGLKVPVYFAAGLTEKANSYYKMFIT 287 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + A LS + E Sbjct: 288 WTNQKVRQTFVQRNMFDFKHIKPFDKTYMHNPGPMVVFATPGMLHAGLSLNIFKKWAPDE 347 Query: 325 KDTV----IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 K+ + S + ++ + + V + + S H + ++ Sbjct: 348 KNMLIVPGYCVSGTVGNKVLSGSKKIEAEPNKFIDVK--MSVEYLSFSAHADGKGIIQLI 405 Query: 381 QWIRPQVLVAIHGEPL-HLVAHKELALQEGIACVPPVR 417 + PQ ++ +HGE ++ + I C P Sbjct: 406 KNCEPQNVLLVHGEEEKMKFLRAKIMQEFNINCYMPAN 443 >gi|313238583|emb|CBY13629.1| unnamed protein product [Oikopleura dioica] Length = 618 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 70/473 (14%), Positives = 146/473 (30%), Gaps = 65/473 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +PLG ++G + L G+ + +M DCG+ D FPD +I Sbjct: 3 DIRIVPLGAGQDVGRSCILVSIGNKN----VMFDCGMHMGYQDA----RRFPDFNYITGG 54 Query: 65 RK-----NLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--VS 115 + ++ A+ I+H H DH GAL + P+Y + + R V+ Sbjct: 55 DQTTLTPHIDAVIISHFHLDHCGALPYMSEQVGYEGPIYMTMPTKVICPILLEDFRKVVT 114 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPV 157 K+ + + V + I Sbjct: 115 KRSAGAETNFFTSEMIKNCMRKVEIVGLHQVINVDDELSIKAYYAGHVLGAAMFKITVGD 174 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 ++++TGD+ + D LG + + L+ +ST A + + Sbjct: 175 ESVLYTGDFNMTPDRHLG-----AAWADRCKPTV--LISESTYA-TTIRDSKRSRERDFL 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDV 271 I + + V ++ R + + + EQ + ++ + Sbjct: 227 KKIHRCVENGGKVLIPVFALGRAQELCILLEQYWDRMKLNVPVYFTAGLAEKATNYYKLF 286 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQ----------GEPRSALAQLSRGEMRNVK 321 +++ S L+ + + P A +S +N Sbjct: 287 VNWTNEKIKSSFVERNLFDFKYIKAFQKEIHMNQSGPQVCFATPGMLHAGMSLEIFQNWC 346 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG---VRVIAEDAECPVHVSGHPYPNDLKR 378 EK+ +I + G + + V V + + S H + + Sbjct: 347 TDEKNCIIMPGYCVAG--TVGHRLLHGERHFKFNGVNVTSRIKVEYMSFSAHADAKGIMQ 404 Query: 379 MYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 + + P+ ++ +HGE K++ G+ C P + P I+ Sbjct: 405 IIKMTEPKNVMFVHGEAAKMEFLAKKVQKDMGLPCFTPANGETVNISCPPQIK 457 >gi|326435554|gb|EGD81124.1| integrator complex subunit 11 [Salpingoeca sp. ATCC 50818] Length = 620 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 70/435 (16%), Positives = 133/435 (30%), Gaps = 56/435 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + +V LPLG ++G + + + + IM DCG+ +D D FPD + + Sbjct: 36 DGIVVLPLGAGQDVGRSCIIVE----MNGRTIMFDCGMHMGYND----DRRFPDFSVLAD 87 Query: 64 ER--KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG----LLE--AKRVYER 113 + + I+H H DH GAL P+Y + LLE K ER Sbjct: 88 GDLTSRIDVVIISHFHLDHCGALPFFSEMCGYDKPIYMTYPTKAICPLLLEDYRKISVER 147 Query: 114 VSKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALVIRSPVGNI 160 ++ S D + G I++ H + +R ++ Sbjct: 148 KGERNFFTSQMIKDCMSKVQPVDLHQSVTLPGDIEIKAYYAGH-VLGAAMFHVRVGDKSV 206 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+TGD+ + D LG I A++ +ST A + + + Sbjct: 207 VYTGDYNMTPDRHLGT-------AWIDFCQPDAIITESTYA-TTIRDSKRCRERDFLTKV 258 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + K V ++ R + + ++ I ++ + Sbjct: 259 HRCVKNGGKVLIPVFALGRAQELCILLETYWERYKLDTPIYFSTGLTEKANEYYRLFVMY 318 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVI---F 330 ++ + L+ + + +P L V L Sbjct: 319 TNQKIKDTFVDRNLFDFKHIRAFDRSYADQPGPQVLFATPGMLHAGVALEVFAKWAGDPR 378 Query: 331 SSRAIPGN---EVAIGHIKNRLVEQGV---RVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + +PG + E V V + S H + + + Sbjct: 379 NMVILPGYCVAGTVGAQVIAGKKEIRVGQQMVNVRLQVEYLSFSAHADAKGIMTLIKQCG 438 Query: 385 PQVLVAIHGEPLHLV 399 + +V +HGE + Sbjct: 439 AKNVVLVHGEKKKME 453 >gi|303275006|ref|XP_003056813.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461165|gb|EEH58458.1| predicted protein [Micromonas pusilla CCMP1545] Length = 803 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 68/473 (14%), Positives = 141/473 (29%), Gaps = 62/473 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV--FPDIT 59 ++ L PLG E+G + + Y K +M DCGV PG + P Sbjct: 14 SDDMLRITPLGAGSEVGRSCVMATY----KGKSVMFDCGV------HPGYAGIASLPYFD 63 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLL------------ 105 + + A+ +TH H DH A+ L + + + + Sbjct: 64 --EVDLSTVDALLVTHFHLDHCAAVPFLVGHTNFKGRILMTHPTKAIFNMLMTDFVKLQK 121 Query: 106 ----EAKRVYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 EA + + I I ++ + + R H + + + Sbjct: 122 NNDSEALFTEQDLKAAIAMIEVVDFHQEIVIDGMKVTPYRAGH-VLGACMFFVDIDGLRV 180 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD+ D L + + ++ +ST + T E+ K+ + Sbjct: 181 LYTGDYSRTPDRHLPG-------ADLPSVPPHVVISESTYGVSPHTPREERE-KRFTDRV 232 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVG 272 + V ++ R + ++ I E I + +R ++V Sbjct: 233 YQILNRGGKVLLPVVALGRAQELLLILEDHWKKHPELANVPIYQASALARRAMTVYQTYI 292 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQ----------GEPRSALAQLSRGEMRNVKL 322 + + + E + + ++ P + LSR Sbjct: 293 NVLNSDMKAAFEEANPFVFNHVQHLSHAGGLDDVGPCVVLATPSMLQSGLSRELFEMWCG 352 Query: 323 AEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 + VI + A+ G + K+ G + + + + S H ++ Sbjct: 353 DANNGVIIADFAVQGTLAREILSDCKSITSRNGGEIPLKMSVDAISFSAHADYPQTQQFL 412 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIID 433 + P +V +HGE + K + A + I+ Sbjct: 413 DALAPPHVVLVHGETGEMGKLKRALEGKAAADGKTMSVYSPKNCQSVEIKYSG 465 >gi|47230093|emb|CAG10507.1| unnamed protein product [Tetraodon nigroviridis] Length = 730 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 64/464 (13%), Positives = 146/464 (31%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 5 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 58 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 59 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 111 Query: 117 KIPCISFQA-----------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + +V H + +I Sbjct: 112 NISADEMLYAETDLEESMDKIETINFHEVREVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 170 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I + L+ +ST E+ + + Sbjct: 171 LLYTGDFSRQEDRHLMA-------AEIPSVKPDILIIESTYGTHIHEKREEREARFCNTV 223 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRV-VSVAI 269 +DI+ +G L+ F+ + R + ++ I ++ + SSL + ++V Sbjct: 224 HDIVNR-EGRCLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 280 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 D++ + + + + + + + P + LSR + Sbjct: 281 TYVNAMNDKIRKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 340 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 341 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTS 400 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 401 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNEQVHIEVHN 444 >gi|268530366|ref|XP_002630309.1| Hypothetical protein CBG00745 [Caenorhabditis briggsae] Length = 637 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 64/460 (13%), Positives = 145/460 (31%), Gaps = 62/460 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM--- 62 + +PLG ++G + L G+ + IM+DCG+ D D FPD ++I Sbjct: 34 IKIVPLGAGQDVGRSCILITIGTKN----IMVDCGMHMGYQD----DRRFPDFSYIGGGG 85 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VS 115 + L + I+H H DH G+L + P+Y + + R + Sbjct: 86 RLTDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIK 145 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVH 162 + + + + IR ++++ Sbjct: 146 GETNFFTSDDIKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLY 205 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ + D + + L+ +ST A R+ E+ + +++ Sbjct: 206 TGDYNMTPDRH------LGAARVLPGVRPTILISESTYATTIRDSKRARERDFLRKVHET 259 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGII 274 + G V++ F+ + R + + + E I +R Sbjct: 260 VMKG-GKVIIPVFA--LGRAQELCILLESYWERMALNVPIYFSQGLAERANQYYRLFISW 316 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEK 325 + + + ++ + + + G + +P + + G + Sbjct: 317 TNENIKKTFVERNMFEFKHIRPMEKGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWCSDPL 376 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRMYQW 382 + +I + G + N + + + + S H + ++ + Sbjct: 377 NMIIMPGYCVAG--TVGARVINGEKRIEIDGKVHEIKLGVEYMSFSAHADAKGIMQLIRQ 434 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 P+ ++ +HGE + K +E V NG+ Sbjct: 435 CEPKHVMFVHGEAEKMEFLKGKVEKEYDIPVHMPANGETC 474 >gi|315231930|ref|YP_004072366.1| polyadenylation specificity factor-like protein [Thermococcus barophilus MP] gi|315184958|gb|ADT85143.1| polyadenylation specificity factor-like protein [Thermococcus barophilus MP] Length = 648 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 79/479 (16%), Positives = 161/479 (33%), Gaps = 86/479 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVF 55 +K+E + LGG E+G + L ++ ++++D G++ PK P D Sbjct: 181 LKSEWIRITGLGGFREVGRSALLV----QTNESFVLVDFGINVAALNDPKKAFPHFDA-- 234 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL-------- 105 P+ +++ L AI ITHAH DH G L L+ + P+Y +P L+ Sbjct: 235 PEFRYVL-NEGLLDAIIITHAHLDHSGLLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFI 293 Query: 106 ---EAKRVYERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMAL-VIR 154 ++ K + +D G + H + + I Sbjct: 294 EIQQSNGAEPLYKPKDIKEVVKHTITLDYGEVRDISPDMRLTLHNAGHILGSAIVHLHIG 353 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 + + N+ TGD+K + + L+ +ST + + + Sbjct: 354 NGLHNVAVTGDFKFIPTRLFEPAN--ARFPRL-----ETLIMESTYGGSNDYQMPREDAE 406 Query: 215 KNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLKRVVSV 267 K + +++ KG VL+ + V R + I+ + E+ G ++ + L ++ Sbjct: 407 KKLIEVIHQTIKRKGKVLIPAMA--VGRAQEIMMVLEEYARVGGIEVPIY---LDGMIWE 461 Query: 268 AIDVGIIKKDQLFLSDESFGLYP----------------REQLIVIATGSQGEPRSALAQ 311 A + + L + +E+ +I + ++ Sbjct: 462 ATAIHTAYPEYLSKHLRDQIFHEGYNPFLNEIFKPVANSKERQDIIDSEEPAIIIASSGM 521 Query: 312 LSRG----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAED 360 L G + + ++++IF S G + V + + Sbjct: 522 LVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLGRQVQRGLKEIPTIGEGGRTEVIRVNME 581 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVA-----HKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP + HK ++ Sbjct: 582 VHTIDGFSGHADRRELMSYVAKVRPRPERVITVHGEPQKCLDLASSLHKRFSISTRAPN 640 >gi|195497711|ref|XP_002096215.1| GE25184 [Drosophila yakuba] gi|194182316|gb|EDW95927.1| GE25184 [Drosophila yakuba] Length = 684 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 136/441 (30%), Gaps = 63/441 (14%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 10 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 61 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 62 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI 119 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 120 SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGH-VLGAAMFMIEIAGI 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + L+ +ST ++ + ++ Sbjct: 179 KILYTGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSL 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 232 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 I D++ + + + E P + LSR + Sbjct: 290 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G A+ + + + + + S H Sbjct: 350 WCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 410 EFIRLLKPTHVVLVHGEQNEM 430 >gi|321457255|gb|EFX68345.1| hypothetical protein DAPPUDRAFT_218302 [Daphnia pulex] Length = 597 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 70/496 (14%), Positives = 149/496 (30%), Gaps = 73/496 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I Sbjct: 3 DIKVTPLGAGQDVGRSCILLQMGGKN----IMLDCGMHMGYND----ERRFPDFSYIADG 54 Query: 65 R--KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++L + I+H H DH GAL + + P+Y + + R Sbjct: 55 NLTESLDCVIISHFHLDHCGALPFMTEMVGYNGPIYMTHPTKAIAPILLEDMRKVAVERK 114 Query: 121 ISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIVH 162 + + + V + ++ ++V+ Sbjct: 115 GETNFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHVLGAAMFHVKVGNQSVVY 174 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ + D LG I L+ +ST A R+ E+ K ++D Sbjct: 175 TGDYNMTPDRHLGA-------AWIDKCRPNILISESTYATTIRDSKRCRERDFLKKVHD- 226 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGII 274 + G VL+ F+ + R + + + E I ++ + Sbjct: 227 CVDRGGKVLIPVFA--LGRAQELCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW 284 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTV----- 328 ++ + ++ + + P + + G + L Sbjct: 285 TNQKIRKTFVQRNMFEFKHIRPFDKSYADTPGPMVVFATPGMLHAGLSLQLFKKWAPNEN 344 Query: 329 -------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 S + ++ Q + V + + S H + ++ Q Sbjct: 345 NMLIMPGYCVSGTVGAKVLSGAKKVEIENRQVIEVK--MSVQYMSFSAHADAKGIMQLIQ 402 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 + PQ ++ +HGE ++ + + P E + Sbjct: 403 YCEPQNVLLVHGE----------GVKMEFLKQKIQQEYGIDCYMPANGESAYIPCKPVVP 452 Query: 442 KDGFLIGKFADLGIAK 457 D L ++ + Sbjct: 453 VDVSLSLLKKEMALYD 468 >gi|15029864|gb|AAH11155.1| Cleavage and polyadenylation specific factor 3-like [Mus musculus] Length = 600 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 68/448 (15%), Positives = 135/448 (30%), Gaps = 82/448 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKN----VMLDCGMHMGYND----DRRFPDFSYITQS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER------ 113 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 114 ----------VSKKIPCISFQAGDKVDV---GAFSIESVRVNHSIPETMALVIRSPVGNI 160 + K V I++ H + I+ ++ Sbjct: 115 KGEANFFTSQMIKDCMKKVVADHLHQTVQVDDELEIKAYYAGH-VLGAAMFQIKVGSESV 173 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 V+TGD+ + D LG I L+ +ST A R+ E+ K ++ Sbjct: 174 VYTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVH 226 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 + ++ G VL+ F+ + R + + + I ++ Sbjct: 227 ETVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFI 283 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 ++ + ++ + + P + V S Sbjct: 284 TWTNQKIRKTFVQRNMFEFKHIKAFDRTFADNPGPMV----------VFATPGMLHAGQS 333 Query: 333 ----RAIPGNEVAIGHI-----------------KNRLVEQGVRVIAEDAECPVHVSGHP 371 R GNE + + + +E + + + S H Sbjct: 334 LQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQMLEVKMQVEYMSFSAHA 393 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + ++ P+ ++ +HGE + Sbjct: 394 DAKGIMQLVGQAEPESVLLVHGEAKKME 421 >gi|24648013|ref|NP_650738.1| cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] gi|21430620|gb|AAM50988.1| RE31408p [Drosophila melanogaster] gi|23171662|gb|AAF55578.2| cleavage and polyadenylation specificity factor 73 [Drosophila melanogaster] gi|220948314|gb|ACL86700.1| CG7698-PA [synthetic construct] Length = 684 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 136/441 (30%), Gaps = 63/441 (14%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 10 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 61 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 62 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI 119 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 120 SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGH-VLGAAMFMIEIAGI 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + L+ +ST ++ + ++ Sbjct: 179 KILYTGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSL 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 232 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 I D++ + + + E P + LSR + Sbjct: 290 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G A+ + + + + + S H Sbjct: 350 WCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 410 EFIRLLKPTHVVLVHGEQNEM 430 >gi|321468347|gb|EFX79332.1| hypothetical protein DAPPUDRAFT_304859 [Daphnia pulex] Length = 597 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 70/496 (14%), Positives = 149/496 (30%), Gaps = 73/496 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I Sbjct: 3 DIKVTPLGAGQDVGRSCILLQMGGKN----IMLDCGMHMGYND----ERRFPDFSYIADG 54 Query: 65 R--KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++L + I+H H DH GAL + + P+Y + + R Sbjct: 55 NLTESLDCVIISHFHLDHCGALPFMTEMVGYNGPIYMTHPTKAIAPILLEDMRKVAVERK 114 Query: 121 ISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIVH 162 + + + V + ++ ++V+ Sbjct: 115 GETNFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHVLGAAMFHVKVGNQSVVY 174 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ + D LG I L+ +ST A R+ E+ K ++D Sbjct: 175 TGDYNMTPDRHLGA-------AWIDKCRPNILISESTYATTIRDSKRCRERDFLKKVHD- 226 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGII 274 + G VL+ F+ + R + + + E I ++ + Sbjct: 227 CVDRGGKVLIPVFA--LGRAQELCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW 284 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTV----- 328 ++ + ++ + + P + + G + L Sbjct: 285 TNQKIRKTFVQRNMFEFKHIRPFDKSYADTPGPMVVFATPGMLHAGLSLQLFKKWAPNEN 344 Query: 329 -------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 S + ++ Q + V + + S H + ++ Q Sbjct: 345 NMLIMPGYCVSGTVGAKVLSGAKKVEIENRQVIEVK--MSVQYMSFSAHADAKGIMQLIQ 402 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 + PQ ++ +HGE ++ + + P E + Sbjct: 403 YCEPQNVLLVHGE----------GVKMEFLKQKIQQEYGIDCYMPANGESAYIPCKPVVP 452 Query: 442 KDGFLIGKFADLGIAK 457 D L ++ + Sbjct: 453 VDVSLSLLKKEMALYD 468 >gi|206900409|ref|YP_002249966.1| RNA-metabolising metallo-beta-lactamase family [Dictyoglomus thermophilum H-6-12] gi|206739512|gb|ACI18570.1| RNA-metabolising metallo-beta-lactamase family [Dictyoglomus thermophilum H-6-12] Length = 515 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 93/501 (18%), Positives = 169/501 (33%), Gaps = 122/501 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD-----------LPGV---------- 51 GV IG N L G + I +D G++F +++ + G+ Sbjct: 10 GVNCIGGNKILLEDGEYA----IFLDFGINFNEENKYFDEFLKPRQIFGIYDLLHLNLLP 65 Query: 52 --------DLVFPDI------TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 DL P+I F+ ++ + + AI I+HAH DH G L + VPV Sbjct: 66 PLKGLYREDLELPNIWENFEGHFLYRKVEPI-AILISHAHLDHLGYLPYI--THQVPVIT 122 Query: 98 SPFAIGLL-----------------EAKRVYERVSKKIPCISFQA--------------- 125 S L+ + K + + K I FQ Sbjct: 123 S-LTSALIIKSLEDTSKNLSDLCFVKLKNERDGILKAEENIIFQRKYITYSENHSDKVFE 181 Query: 126 ---------------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + F I V+HSIP + I++ G IV+TG Sbjct: 182 FWKRIERKRINELHENPLEVKNQNLKIDPFEIMFFPVDHSIPGAGSFAIKTSSGWIVYTG 241 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D +L + L I + +L N +E +K+ +I+K+ Sbjct: 242 DLRLHGRNGHLTKEFINKLKHI-DVKVLICEGTHPNIE---KIYTEDDVKEKALEIVKSC 297 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS---LKRVVSVAIDVGIIKKDQLFL 281 V+ ++ R+ S ++I ++ GR++VL L+ + + + F Sbjct: 298 HHYVIADFGPRNIDRLMSFLEIGKETGRRLVLTLKDIYLLESLSFIGYPDPKRDEFITFY 357 Query: 282 SDESFGLYPREQLI-----------VIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTVI 329 P E+ + V + + P+ + +S + + + V Sbjct: 358 EKPKGNYDPWEKNLLERYKDIPGKAVNSKDIRKNPQDYILCISYYDFHLLLDILPDMGVY 417 Query: 330 FSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDA----ECPVHVSGHPYPNDLKRMYQW 382 S + NE I+N L + + E P+H SGH + + L + Sbjct: 418 IFSSSEAFNEEMKIDQQKIENWLKYFNLEIRGNLVEKREESPLHASGHIHGDGLLELISN 477 Query: 383 IRPQVLVAIHGEPLHLVAHKE 403 +P++L+ +H E + Sbjct: 478 AKPEILIPVHSEKADFFEKFK 498 >gi|170290682|ref|YP_001737498.1| metallo-beta-lactamase superfamily hydrolase-like protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174762|gb|ACB07815.1| hydrolase of the metallo-beta-lactamase superfamily-like protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 476 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 94/469 (20%), Positives = 170/469 (36%), Gaps = 90/469 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDLVFPDIT--F 60 EL LGGV EIG N L SS + I +D G +F +++ + P + + Sbjct: 1 MELRV--LGGVREIGGNRILLR----SSNESIFLDYGKNFLREEEFFQRPFMSPSFSEDY 54 Query: 61 IMK------ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 + E +NL + I+HAH+DH+G L+ L + VY A ++ A Sbjct: 55 LKTGLISSLEHENLRGVLISHAHQDHWGYLN-LLPQ-GIEVYMGEAAGKIIGANVELGYA 112 Query: 115 SKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + I +F+ GD + +G FSI + V+HS+P + +I + +TGD ++ Sbjct: 113 EEVLHTIRTFRTGDTISLGDFSIVPIHVDHSVPGSYGFLIECGNIKLAYTGDLRM---HG 169 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNA-------------------MREGTCIS----- 209 D + + G+ AL+ ++T R G Sbjct: 170 PRRDMTLDFIDEAASMGVDALIMEATKVAPENDPETSIIRLLETRLFYRWGVEPPKRIKF 229 Query: 210 ----EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 E+ + + I + + + +L+ T SS RIRS+ + A+++ R +V+ + + Sbjct: 230 ELSNEEEVTERIKSVCEGSDSIILIETSSSDADRIRSVFEAAKKLSRVLVMDER-MAFIN 288 Query: 266 SVAIDVGIIKKDQL-------------------------FLSDESFGLYPREQLIVIATG 300 GI + + +I Sbjct: 289 EAMKGAGIDGLPGIGDYLLWRRKRRGEGEERTSSRERRGMRIFIERFEDLSGEEAIIQGE 348 Query: 301 SQGEPR----------SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 + E S + + K+ + S + +++ + N L+ Sbjct: 349 RRAEIFKEPHNFLVLTSNATRFLYEIPMDAKVRLDFILSRSESFSEESALSLDRLMNWLL 408 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLV 399 GVR +HVSGH P + + I P ++ IH E L Sbjct: 409 LYGVRRYY-----RIHVSGHMMPEQMGEFVESINPGRIIPIHTEHPDLF 452 >gi|257052962|ref|YP_003130795.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256691725|gb|ACV12062.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 411 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 63/450 (14%), Positives = 124/450 (27%), Gaps = 72/450 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG GE+G + L + +++D G+ V V P Sbjct: 1 MKLRF--LGGAGEVGRSAILV-------NESLLLDYGMKTETPPQFPVGTVDP------- 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIG----LLEAKRVYERVSKKI 118 A+ +H H DH G++ L S P++ +P L + Sbjct: 45 -----EAVVASHGHLDHVGSIPSLLSGSRRPPIHWTPPTRELALTLARDTLKLHGGTYDC 99 Query: 119 PCISFQ------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P + +V + H IP + +++ +++TGD+ Sbjct: 100 PFTEVDVRRVTQVSETHGYREPFEVAGHEVTFFNAGH-IPGSAHVLVDDGETRLLYTGDF 158 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 D+ ++ T ++ +ST + +++ + +K Sbjct: 159 HTDNQRLVAGTT--------ARPDADVVLTESTYSDVSHE--DRATLEERFAESVKTTLW 208 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS- 282 G V++ F+ + R + ++ I E + G KRV + +D L Sbjct: 209 EGGTVVIPAFA--IGRTQEMLMICEAHDIPCYVDGMG-KRVTKMLRRHPEFVRDPDALQR 265 Query: 283 -----------DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 D + ++ T A+ + R V Sbjct: 266 AKSHARFVDGRDGQRKRIAAQNTAIVTTSGMLSGGPAMTYIPEIRDRPVNKIALTGYQVE 325 Query: 332 SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + S H L R L+ Sbjct: 326 GTPGRDLLETGSAEIDGQRMPVAAQVESYD-----FSAHADRAGLDAFLDAYRETQLLVN 380 Query: 392 HGEPLHLVAHKELALQEGIACVPPVRNGKM 421 HG+ A + ++ Sbjct: 381 HGDRCEQFAAELAGDGFDATAPSIGETVEV 410 >gi|308509314|ref|XP_003116840.1| hypothetical protein CRE_01624 [Caenorhabditis remanei] gi|308241754|gb|EFO85706.1| hypothetical protein CRE_01624 [Caenorhabditis remanei] Length = 612 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 76/573 (13%), Positives = 175/573 (30%), Gaps = 80/573 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + +PLG ++G + L G + IM+DCG+ D D FPD ++I Sbjct: 4 KVPTIKIVPLGAGQDVGRSCILITIGGKN----IMVDCGMHMGYQD----DRRFPDFSYI 55 Query: 62 M---KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--- 113 + L + I+H H DH G+L + P+Y + + R Sbjct: 56 GGGGRLTDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQ 115 Query: 114 --VSKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVG 158 + + + + + IR Sbjct: 116 CDIKGESNFFTSDDIKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRLGDH 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKN 216 ++++TGD+ + D + + L+ +ST A R+ E+ + Sbjct: 176 SVLYTGDYNMTPDRH------LGAARVLPGVRPTVLISESTYATTIRDSKRARERDFLRK 229 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAID 270 +++ + G V++ F+ + R + + + E I +R Sbjct: 230 VHETVMKG-GKVIIPVFA--LGRAQELCILLESYWERMALSVPIYFSQGLAERANQYYRL 286 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVK 321 + + + ++ + + + G + +P + + G + Sbjct: 287 FISWTNENIKKTFVERNMFEFKHIRPMEKGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWC 346 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKR 378 + +I + G + N + + D + + S H + + Sbjct: 347 GDPLNMIIMPGYCVAG--TVGARVINGEKKIEIDGKMHDIKLGVEYMSFSAHADAKGIMQ 404 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHG 438 + + PQ ++ +HGE + K +E V NG+ + + P I + Sbjct: 405 LIRQCEPQHVMFVHGEAEKMEFLKGKVEKEYKVPVHMPANGETVVITAQPKLDIKVPLEV 464 Query: 439 LFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDGG 498 D L + ++ V + N+ + Sbjct: 465 CNKIDRSLSLDPNPSKL-------ECPFVAEIVYDQANDNLH----------ILSTAESE 507 Query: 499 KIHKLLLKT-VITTVVDLPQFRRKDLKLLRESI 530 + + + ++ ++ + R D +L + + Sbjct: 508 DLAEDADCVPITLSLSEIIKVNRIDWNVLAKEL 540 >gi|196007172|ref|XP_002113452.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens] gi|190583856|gb|EDV23926.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens] Length = 596 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 71/577 (12%), Positives = 155/577 (26%), Gaps = 80/577 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ +PLG ++G + L G + IM DCG+ +D D FPD T+I + Sbjct: 3 EIKVVPLGAGQDVGRSCILVTIGCKN----IMFDCGMHMGYND----DRRFPDFTYITRS 54 Query: 65 RKN---LMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GSLTQFLDCVIISHFHLDHCGALPYFSEMCKYDGPIYMTHPTKAICPILLEDYRKITVDR 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + +N + +++ +++ Sbjct: 115 KGEKNFFTSQMIKDCMKKVKAINLHQTVKVDDDLEIKAYYAGHVLGAAMFLVKVGCESVL 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + D LG I L+ +ST A + + + Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYA-TTIRDSKRCRERDFLTKVH 226 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + + V ++ R + + + E I ++ Sbjct: 227 ECVERGGKVLIPVFALGRAQELCILLETYWDRMNLKVPIYFSTGLTEKANHYYKLFITWT 286 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTV------ 328 ++ + ++ + + P + + G + L Sbjct: 287 NQKIRRTFVQHNMFEFKHIKPFDRALIDNPNPMVVFATPGMLHGGLSLQIFKKWAPDDKN 346 Query: 329 ------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + + ++ +Q + V A + S H + ++ + Sbjct: 347 MVILPGYCVAGTVGNKILSGQRTVELENKQIIDVK--LAVEYMSFSAHADAKGIMQLIKH 404 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ ++ +HGE + L + P K V L Sbjct: 405 AEPENVMLVHGEASKMN---FLMQKIEQEIGTPCYMPKNGETVKIRASPKIAVDMSFELY 461 Query: 443 DGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHK 502 I + + + P I++ G+ D + ++ Sbjct: 462 KQNQPQISLKSHIHE----------------NKKPRLDVDPRIIE-GVIIMDDNSTRLVD 504 Query: 503 LLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 + + + + + + L L Sbjct: 505 SKQALHELGMKSHNLNFCSTISVPDKVVRNELLRELY 541 >gi|195395198|ref|XP_002056223.1| GJ10819 [Drosophila virilis] gi|194142932|gb|EDW59335.1| GJ10819 [Drosophila virilis] Length = 686 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 133/442 (30%), Gaps = 70/442 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 16 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 68 E--ADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIKISNIS 125 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 126 TEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 184 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + + L+ +ST ++ + ++ + Sbjct: 185 TGDFSRQEDRHLMA-------AEVPPKKPDVLITESTYGTHIHEKREDRESRFTSLVQKI 237 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA------ 268 G L+ F+ + R + ++ I ++ + SSL + Sbjct: 238 VMQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYIN 295 Query: 269 -------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + G+ + + P + LSR + Sbjct: 296 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVI--MASPGMMQSGLSRELFESWC 353 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K+ VI + + G + G ++ + + S H Sbjct: 354 TDPKNGVIIAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQT 410 Query: 377 KRMYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 411 SEFIRMLRPNHVVLVHGEQNEM 432 >gi|198451826|ref|XP_001358526.2| GA20526 [Drosophila pseudoobscura pseudoobscura] gi|198131664|gb|EAL27667.2| GA20526 [Drosophila pseudoobscura pseudoobscura] Length = 684 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 133/440 (30%), Gaps = 66/440 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 14 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 66 E--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNIS 123 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 124 TEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + L+ +ST ++ + ++ Sbjct: 183 TGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKT 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 236 VLQGGRCLIPVFA--LGRAQELLLILDEFWSQNPELHEIPIYYASSLAKKCMAVYQTYIN 293 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + E P + LSR + Sbjct: 294 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTD 353 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+ VI + + G + G ++ + + S H Sbjct: 354 PKNGVIIAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSE 410 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 411 FIRLLRPTHVVLVHGEQNEM 430 >gi|195343244|ref|XP_002038208.1| GM18692 [Drosophila sechellia] gi|194133058|gb|EDW54626.1| GM18692 [Drosophila sechellia] Length = 684 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 135/441 (30%), Gaps = 63/441 (14%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 10 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 61 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 62 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI 119 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 120 SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGH-VLGAAMFMIEIAGI 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + L+ +ST ++ + ++ Sbjct: 179 KILYTGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSL 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 232 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 I D++ + + + E P + LSR + Sbjct: 290 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G + + + + + + S H Sbjct: 350 WCTDPKNGVIIAGYCVEGTLAKTVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 410 EFIRLLKPTHVVLVHGEQNEM 430 >gi|195145744|ref|XP_002013850.1| GL23169 [Drosophila persimilis] gi|194102793|gb|EDW24836.1| GL23169 [Drosophila persimilis] Length = 684 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 133/440 (30%), Gaps = 66/440 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 14 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 66 E--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNIS 123 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 124 TEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + L+ +ST ++ + ++ Sbjct: 183 TGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKT 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 236 VLQGGRCLIPVFA--LGRAQELLLILDEFWSQNPELHEIPIYYASSLAKKCMAVYQTYIN 293 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + E P + LSR + Sbjct: 294 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTD 353 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+ VI + + G + G ++ + + S H Sbjct: 354 PKNGVIIAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSE 410 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 411 FIRLLRPTHVVLVHGEQNEM 430 >gi|195112455|ref|XP_002000788.1| GI10422 [Drosophila mojavensis] gi|193917382|gb|EDW16249.1| GI10422 [Drosophila mojavensis] Length = 597 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 143/437 (32%), Gaps = 60/437 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKITPLGAGQDVGRSCLLLSMGGKN----IMLDCGMHMGYND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL + + P+Y + + R Sbjct: 55 GPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + V + I+ ++V Sbjct: 115 KGESNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHVLGAAMFWIKVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 G VL+ F+ + R + + + E I ++ + Sbjct: 228 -CVLKGGKVLIPVFA--LGRAQELCILLETYWERMNLKYPIYFALGLTEKANTYYKMFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAE 324 ++ + ++ + + P + + A LS + E Sbjct: 285 WTNQKIRKTFVHRNMFDFKHIKPFDKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNE 344 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 + VI + G +G K E + + A + S H + ++ Q Sbjct: 345 NNMVIMPGYCVQGTVGNKILGGAKKVECENRQIIEVKMAVEYMSFSAHADAKGIMQLIQN 404 Query: 383 IRPQVLVAIHGEPLHLV 399 P+ ++ +HGE + Sbjct: 405 CEPKHVMLVHGEAEKMK 421 >gi|159488791|ref|XP_001702386.1| subunit of mRNA cleavage and polyadenylation specificity factor [Chlamydomonas reinhardtii] gi|158271180|gb|EDO97006.1| subunit of mRNA cleavage and polyadenylation specificity factor [Chlamydomonas reinhardtii] Length = 690 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 136/450 (30%), Gaps = 77/450 (17%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPK-DDLPGVDLVFPDITFIMKE 64 +PLG E+G + ++ Y K +M DCG+ +F D LP +D + DI Sbjct: 1 IIPLGAGSEVGRSCIIFKY----QDKTVMFDCGIHPAFKGMDSLPLLDEI--DI------ 48 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL----------------E 106 + ITH H DH A+ L ++ + + E Sbjct: 49 -DTVDVALITHFHLDHCAAVPYLLRKTRFKGRIFMTHPTKAIYYSLLRDLAKGSKHSSEE 107 Query: 107 AKRVYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 A + + + I ++V I R H + ++ ++TGD Sbjct: 108 ALFNEDDLEASMQRIEVVDFYQTIEVAGMQITPYRAGH-VLGAAMFLVEVAGCRCLYTGD 166 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKN 223 + D L I ++ +ST E+ + I + + Sbjct: 167 YSRLPDRHLPA-------ADIPPVKPHIVIVESTYGTSRHLPRLQREQLLLDTIRNTINR 219 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI---------GRKIVLLGSSLKRVVSVAIDVGII 274 G V++ + + R + ++ + ++ G I S + + + V Sbjct: 220 G-GRVIMPVVA--LGRAQELLLLLDEYWEAHKSELSGIPIYQASSMMSKALGVYQTYVES 276 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQG------------EPRSALAQLSRGEMRNVKL 322 D + + + + + P + SR Sbjct: 277 LNDDIKRVFHERNPFKFRHVQTLKNPAHFISDYSGPCVIMATPSGLQSGASRDFFEAWCE 336 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 ++T I A+ G + + +G RV A + S H + Sbjct: 337 DSRNTCIICDFAVQG---TLAKEILGGPSSITTREGRRVPLRIAVHNISFSAHADYDQTS 393 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 +RP +V +HGE + + Sbjct: 394 GFLDAVRPPHVVLVHGEYGEMRKLAKALKD 423 >gi|288931295|ref|YP_003435355.1| KH-domain/beta-lactamase-domain protein [Ferroglobus placidus DSM 10642] gi|288893543|gb|ADC65080.1| KH-domain/beta-lactamase-domain protein [Ferroglobus placidus DSM 10642] Length = 634 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 103/273 (37%), Gaps = 43/273 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + IMIDCGV+ + L P++T + Sbjct: 176 KDKWVRITFLGGSREVGRSCYLL----QTPESKIMIDCGVNVSNLNQTPY-LYVPEVTPL 230 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 ++ A+ +THAH DH G + L+ + P+Y + L ++ Sbjct: 231 ----DSIDAVVVTHAHLDHCGLIPILYKYGYKGPIYLTQPTRDLMVLLQLDFIDVAVKEG 286 Query: 113 RVSKKIPCISFQAGDKVDV----------GAFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 V+ +A + H + +A I + N+ Sbjct: 287 GVTPYESQHIREALKHTITLDYGVVTDIAPDVRLTFYNAGHILGSAIAHFHIGEGLYNVA 346 Query: 162 HTGDWKLDDDAI-LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+K + + T+ L AL+ ++T E S K ++ + ++ Sbjct: 347 FTGDFKFERTRLFDKAETNFPRLE--------ALVMEATYGGSEDFQPSRKEAEEKLIEV 398 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 + G VL+ F+ V R + ++ + E+ Sbjct: 399 INKTVSRGGKVLIPAFA--VGRSQEVMIVLEEA 429 >gi|159901774|ref|YP_001548019.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159894813|gb|ABX07891.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 830 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 93/460 (20%), Positives = 152/460 (33%), Gaps = 85/460 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F P GG E+G + + G I++D G+ PG PD+ + Sbjct: 46 ISFHPFGGAQEVGASCGILKLGMRH----ILVDAGMRPA--ARPG-QSRTPDLEALKGFP 98 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLE------AKRVYERVSKKI 118 L AI ITHAH DH G L + S VP+YA+ I L+ A+ + + Sbjct: 99 --LDAILITHAHIDHTGCLPLVASLFPTVPIYATESTIALMRILLLDSARIMEQEHLAHE 156 Query: 119 PCISFQAGDKVD--------------------VGAFSIESVRVNHSIPETMALVIRSPVG 158 V S+ + H I L I SP G Sbjct: 157 LETPLYDQAMVTETLARIIPVAFHQELRPVAANQEISVTYLPAGH-ILGAGMLHITSPWG 215 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKN 216 +I+HTGD + + V D ++L + ++C+ T R E+ + Sbjct: 216 SILHTGDISVGHHRTITGV-DLNTLPQ-----VDMMICEGTYGNRSHKSRKDQEQNVVAT 269 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLLGS------SLKR 263 I ++ + G VL+ F+ V R + +I I + I + G S ++ Sbjct: 270 IQQVIGHG-GRVLIPAFA--VGRAQELILILKAFRTSGVVSPVTIYVDGMCKAVCESYQQ 326 Query: 264 VVSVAIDV----------GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 + + G+ P VI + S L+ Sbjct: 327 QSHDLHPALQKFLANSQRPLFVDPSFGVLAVHQGMRP----RVIQSDEPAIIISTSGMLT 382 Query: 314 RGEMRNV--KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV-----RVIAEDAECPVH 366 G KLA+ E + + RV Sbjct: 383 GGPAPLYATKLAQDPRNAIIFTGYQDEESPGAAMLKATQGGTITLNGQRVTLGCPVYRYG 442 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPL---HLVAHKE 403 +SGH L+++ + ++PQ LV +HG+ HL A + Sbjct: 443 LSGHADLGQLEQVIRLVQPQQLVLVHGDHDALSHLAARFK 482 >gi|195037533|ref|XP_001990215.1| GH19212 [Drosophila grimshawi] gi|193894411|gb|EDV93277.1| GH19212 [Drosophila grimshawi] Length = 686 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 69/446 (15%), Positives = 134/446 (30%), Gaps = 73/446 (16%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 12 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 63 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 64 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIKI 121 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 122 SNISTDQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGI 180 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + + L+ +ST ++ + + Sbjct: 181 KILYTGDFSRQEDRHLMA-------AEVPPKKPDVLITESTYGTHIHEKREDRESRFTTL 233 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA-- 268 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 234 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEYWSQNPDLHEIPIYYASSLAKKCMAVYQ 291 Query: 269 -----------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 + + G+ + + P + LSR Sbjct: 292 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVI--MASPGMMQSGLSRELF 349 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPY 372 + K+ VI + + G + + G ++ + + S H Sbjct: 350 ESWCTDPKNGVIIAGYCVEG---TLAKTILSEPEEIITLSGQKLPLNMSVDYISFSAHTD 406 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 407 YQQTSEFIRLLRPNHVVLVHGEQNEM 432 >gi|194743214|ref|XP_001954095.1| GF18101 [Drosophila ananassae] gi|190627132|gb|EDV42656.1| GF18101 [Drosophila ananassae] Length = 684 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 67/440 (15%), Positives = 133/440 (30%), Gaps = 66/440 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 14 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 66 E--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNIS 123 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 124 TEQMLYTDADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + L+ +ST ++ + ++ Sbjct: 183 TGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKT 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 236 VQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYIN 293 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + E P + LSR + Sbjct: 294 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTD 353 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+ VI + + G + G ++ + + S H Sbjct: 354 PKNGVIIAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSE 410 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 411 FIRMLKPTHVVLVHGEQNEM 430 >gi|213512037|ref|NP_001133354.1| cleavage and polyadenylation specificity factor subunit 3 [Salmo salar] gi|209151738|gb|ACI33081.1| Cleavage and polyadenylation specificity factor subunit 3 [Salmo salar] Length = 690 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 65/464 (14%), Positives = 146/464 (31%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 I++TGD+ +D L I + L+ +ST E+ + I Sbjct: 181 ILYTGDFSRQEDRHLMA-------AEIPSVKPDILITESTYGTHIHEKREEREARFCNTI 233 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ +G L+ F+ + R + ++ I ++ + SSL + Sbjct: 234 HDIVNR-EGRCLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 290 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + + P + LSR + Sbjct: 291 TYVNAMNDKIRKAINVNNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 350 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + ++ G I + + + + + + S H Sbjct: 351 WCTDKRNGVIIAGYSVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTS 410 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 411 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 454 >gi|194674141|ref|XP_883112.3| PREDICTED: cleavage and polyadenylation specific factor 3-like isoform 6 [Bos taurus] Length = 572 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 146/450 (32%), Gaps = 73/450 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFSD----DRRFPDFSYITRS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + +++ Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPT-XMIKDCMK--------K 105 Query: 120 CISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 ++ V V I++ H + I+ ++V+TGD+ + D LG Sbjct: 106 VVAVHLHQTVQVDDELEIKAYYAGH-VLGAAMFQIKVGSESVVYTGDYNMTPDRHLGA-- 162 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 163 -----AWIDKCRPSLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 214 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 215 LGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFE 274 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI- 345 + + P + V S R GNE + + Sbjct: 275 FKHIKAFDRAFADSPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMP 324 Query: 346 ---------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + +L +G +V+ + + S H + ++ P+ ++ Sbjct: 325 GYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPENVL 384 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +HGE + K+ QE NG Sbjct: 385 LVHGEAKKMEFLKQKIEQEFRVNCYMPANG 414 >gi|159041038|ref|YP_001540290.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis IC-167] gi|157919873|gb|ABW01300.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167] Length = 636 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 79/477 (16%), Positives = 151/477 (31%), Gaps = 82/477 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDIT 59 KNE + LG E+G + L +S +++D GV D+ P D++ Sbjct: 176 KNEYVKVTCLGACFEVGRSALLIE----TSESRVLLDAGVKPSGGMDEAPFFDVI----- 226 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------VY 111 + NL A+ I+HAH DH G L L+ + PVY + L+E Sbjct: 227 ----DVDNLDAVVISHAHLDHIGMLPYLYKYGYKGPVYMTEPTKYLMEILLTDYIDLSSE 282 Query: 112 ERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNI 160 S ++ GD D+ + H I ++ I + + NI Sbjct: 283 RGYSYYGLSELASSLYHSVTVDYGDVTDISPDIKLTLYDAGHEIGSALSHLHIGNGLYNI 342 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+TGD+K +L + + L+ +ST ++ + + + + Sbjct: 343 VYTGDFKYGPSRLLNP-------AHSIFKRVELLIMESTYGGKDDVQKPREEAEAELIQL 395 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSI-------IDIAEQIGRKIVLLGSSLKRVVSVAID 270 + G VL+ FS+ R + I + + I + G L+ + + Sbjct: 396 VGKTLENGGKVLIPVFST--GRAQEILFLLNDSMQAGKLTKAPIYVDGMVLQTLNVHLMF 453 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ--------LSRGEMRNVKL 322 + + L + + E + + + R + + Sbjct: 454 PDYLNNNVKELIYDGVNPFISEYVKPVERARNPDKRQEQVMDILQGPPSIILAPHGMLSG 513 Query: 323 AEKDTVIFSSRA----------IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH------ 366 G + + ++ +D V+ Sbjct: 514 GPAMDYFVHMADDAKNSLIFVSYQGEGTLGRRLIQGERKVNLKYYDQDITVNVNMNVFHE 573 Query: 367 --VSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 SGH L I P+ ++ +HGEP L+ L+++ + N Sbjct: 574 PGFSGHSDRKQLMNYVGRIEPKPHKVMLVHGEPSKLMNLA-LSIELKYKIDTVMLNH 629 >gi|194900154|ref|XP_001979622.1| GG16362 [Drosophila erecta] gi|190651325|gb|EDV48580.1| GG16362 [Drosophila erecta] Length = 684 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 136/441 (30%), Gaps = 63/441 (14%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 10 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 61 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 62 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI 119 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 120 SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGH-VLGAAMFMIEIAGI 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + L+ +ST ++ + ++ Sbjct: 179 KILYTGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHVHEKREDRENRFTSL 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 232 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 I D++ + + + E P + LSR + Sbjct: 290 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G A+ + + + + + S H Sbjct: 350 WCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 410 EFIRLLRPTHVVLVHGEQNEM 430 >gi|195108751|ref|XP_001998956.1| GI24246 [Drosophila mojavensis] gi|193915550|gb|EDW14417.1| GI24246 [Drosophila mojavensis] Length = 686 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 133/442 (30%), Gaps = 70/442 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 16 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 68 E--ADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIKISNIS 125 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ DV + H + +I I++ Sbjct: 126 TEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 184 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + + L+ +ST ++ + ++ + Sbjct: 185 TGDFSRQEDRHLMA-------AEVPPKKPDVLITESTYGTHIHEKREDRESRFTSLVQKI 237 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA------ 268 G L+ F+ + R + ++ I ++ + SSL + Sbjct: 238 VMQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYIN 295 Query: 269 -------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + G+ + + P + LSR + Sbjct: 296 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVI--MASPGMMQSGLSRELFESWC 353 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K+ VI + + G + G ++ + + S H Sbjct: 354 TDPKNGVIIAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQT 410 Query: 377 KRMYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 411 SEFIRMLRPNHVVLVHGEQNEM 432 >gi|195569857|ref|XP_002102925.1| GD20157 [Drosophila simulans] gi|194198852|gb|EDX12428.1| GD20157 [Drosophila simulans] Length = 684 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 135/441 (30%), Gaps = 63/441 (14%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 M +EE L PLG E+G + + + K IM+DCG+ L G+D P Sbjct: 10 MPDEESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPY 61 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVS 115 + I + +FI+H H DH GAL + + + Sbjct: 62 VDLIE--ADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI 119 Query: 116 KKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 I + ++ DV + H + +I Sbjct: 120 SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGH-VLGAAMFMIEIAGI 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNI 217 I++TGD+ +D L + L+ +ST ++ + ++ Sbjct: 179 KILYTGDFSRQEDRHLMA-------AEVPPMKPDVLITESTYGTHIHEKREDRENRFTSL 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + G L+ F+ + R + ++ I ++ + SSL + Sbjct: 232 VQKIVQQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 I D++ + + + E P + LSR + Sbjct: 290 TYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G + + + + + + S H Sbjct: 350 WCTDPKNGVIIAGYCVEGTLAKTVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 410 EFIRLLKPTHVVLVHGEQNEM 430 >gi|241245173|ref|XP_002402434.1| cleavage and polyadenylation specificity factor, putative [Ixodes scapularis] gi|215496345|gb|EEC05985.1| cleavage and polyadenylation specificity factor, putative [Ixodes scapularis] Length = 596 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 72/466 (15%), Positives = 142/466 (30%), Gaps = 57/466 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD +++ +E Sbjct: 3 QISVTPLGAGQDVGRSCILLSIGGKN----IMLDCGMHMGYND----ERRFPDFSYVTQE 54 Query: 65 ---RKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 +L + I+H H DH GAL + + PVY + + R Sbjct: 55 GPLNDHLDCLIISHFHLDHCGALPYMTEMVGYAGPVYMTHPTKAICPILLEDFRKITVDR 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V VN + IR ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFHIRVGSQSVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + D LG I L+ +ST A + + + Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYA-TTIRDSKRCRERDFLTKVH 226 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIK 275 V ++ R + + + E I ++ + Sbjct: 227 DCIDKGGKVLIPVFALGRAQELCILLETYWDRMNLKVPIYFAVGLTEKATNYYKMFITWT 286 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEKD 326 ++ + ++ + + P + A LS + E + Sbjct: 287 NQKIRKTFVQRNMFDFKHIKPFDRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPVEGN 346 Query: 327 TVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 VI + G + + ++ V + + + S H + ++ Sbjct: 347 MVIMPGYCVAGTVGHKILSGARKVELDNRQVVEVKMSVQYMSFSAHADAKGIMQLIHQCE 406 Query: 385 PQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 P ++ +HGE K++ + I C P + PD I Sbjct: 407 PSNVLLVHGEASKMEFLRKKVLQEFNIDCYMPANGETVQIDTPDII 452 >gi|268318428|ref|YP_003292146.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] gi|262335962|gb|ACY49758.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 529 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 85/520 (16%), Positives = 168/520 (32%), Gaps = 142/520 (27%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----------PKDDLPGV-- 51 +L GG EIG N L + + +++D G SF G+ Sbjct: 8 DLSVSVFGGWAEIGGNQILLE----AEGEALLLDFGRSFNRWNRHFTEFLGPRSTLGLRD 63 Query: 52 -------------------DLVFPDITFIMKERKN-------LMAIFITHAHEDHYGALH 85 D +FP + + + + + A+ ++HAH DH G++ Sbjct: 64 LLALELLPRFRGLYRDAADDTLFP--SELERRFLDGAPDGAHIQALLLSHAHLDHSGSIA 121 Query: 86 DLWSFLHVPVYASPFAIGLLEAK------------------------------------- 108 L +PV AS +L+A Sbjct: 122 YL--RADLPVVASAATAAILKAMQDTSQIGLDAEAAYLSPRLPNDEGVLESVRRGSYLRR 179 Query: 109 -------------RVYERVSKKIPCISFQAG-DKVDVGAFSIESVRVNHSIPETMALVIR 154 S+ + + + VG F +E+ V+HS+P +A I Sbjct: 180 PYRLLLGRLESFSLQSPAKSRSLDGHPWTPAATPLSVGCFRVEAFPVDHSVPGALAFYIE 239 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDK-DSLCA-IGNEGILALMCDSTNAMREGTCISEKG 212 +P G +V+TGD + G D + + + L+ + T +G +E Sbjct: 240 TPAGPVVYTGDLRR-----HGRWGDLTERFVQTLEGRDVFLLITEGTRLDSQGPARTEAA 294 Query: 213 IKKNIYDIMKNAKGCVLVTTF-SSSVSRIRSIIDIAEQIGRKIVLLGSSLK--------- 262 ++ +++ ++ G ++ F ++ R+++ +++A + R++V+ Sbjct: 295 VQAALHEAIRRHTGALIAVDFAPRNLERLQACLEVARDLDRQLVITPKDAYLLRALAEAD 354 Query: 263 ----------RVVSVAIDVGI----IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 R++ ++ + S R+ + E Sbjct: 355 PSWQATLQAARILQEPRARRPSWEAWLWERSDIHPASLEEIARDPGAFLLAFGFYEINRL 414 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV--AIGHIKNRLVEQGVRVIAE------- 359 L + IFS+ E + + + L R + E Sbjct: 415 LDLRLLEQAMGRPRRPG-LYIFSNSYWADEEQRLDLAVLMHWLRALDFRPLPEWLENPPS 473 Query: 360 ---DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 +AE P H SGH +DL + + +RP+ L+ +H E Sbjct: 474 NPANAENPYHTSGHAPADDLVEVARRLRPRHLLPVHTEAP 513 >gi|150400157|ref|YP_001323924.1| beta-lactamase domain-containing protein [Methanococcus vannielii SB] gi|150012860|gb|ABR55312.1| beta-lactamase domain protein [Methanococcus vannielii SB] Length = 433 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 147/448 (32%), Gaps = 53/448 (11%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA- 70 GG E+G + S + ++ DCGV G++ +L A Sbjct: 7 GGAFEVGRSCVEV----KSDKSTVLFDCGVKL---SPKGIEYPI---------LDDLNAD 50 Query: 71 -IFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ---- 124 +F +H+H DH G++ L VP +YA+P + + ++ Sbjct: 51 CVFPSHSHLDHVGSIPVLIRKGMVPAIYATPITKAITKELLRDSLKISQVEGHELPYDKE 110 Query: 125 -------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 F E H IP + +++ IV+TGD K++D Sbjct: 111 DFNTSLSLFRKAGYNKPKKFKDFEFELFNAGH-IPGSSTILLNYGSKKIVYTGDVKVNDT 169 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + D E I L+ +ST E KK + +I K + + Sbjct: 170 EL-VKGADLS----YSKENIDCLIIESTYGGNNQEDRKEAE-KKFVEEIKKTVERGGVAL 223 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVV-SVAIDVGIIKKDQLFLSDESF 286 +V R + II + + K+ + G + R++ + + + Sbjct: 224 IPVFAVDRSQEIIMMLNKYDFKVPVYFDGLGRKITRIMLDYPEYLNYPHELKDAFFKVIE 283 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGH 344 + I+ + G + A + G + E SS G E G Sbjct: 284 VNPKDRKQIIKDLKNNGGIVVSTAGMLEGGPIIPYIFEFMKDKKSSLIFTGYQVEDTAGR 343 Query: 345 IK---NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 ++ + V E S H +L+ + + + P+ L+ HGE L + Sbjct: 344 YLLETGKVKMGELDVTPEFEVMAFQFSAHGEMGELRHIVKKVNPETLIIQHGEASSLESF 403 Query: 402 KELALQEGIACVPPVRNGKMLRLFPDPI 429 K A+ EG + ++ + I Sbjct: 404 KNWAVLEGFSENKVFTPKVGDKINLNEI 431 >gi|55741994|ref|NP_001006770.1| cleavage and polyadenylation specificity factor 3 [Xenopus (Silurana) tropicalis] gi|49522504|gb|AAH75564.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus (Silurana) tropicalis] Length = 692 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 181 LLYTGDFSRQEDRHLMA-------AEIPNVKPDILIIESTYGTHIHEKREEREAR-FCNT 232 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 233 VHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 292 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 293 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 352 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 353 TDKRNGVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEF 412 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 413 VRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVEIEVHN 454 >gi|168034228|ref|XP_001769615.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679157|gb|EDQ65608.1| predicted protein [Physcomitrella patens subsp. patens] Length = 563 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 76/508 (14%), Positives = 157/508 (30%), Gaps = 79/508 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---NL 68 G ++G + + G + IM DCG+ D + +PD +FI K + Sbjct: 3 GAGQDVGKSCVIVTIGGKN----IMFDCGMHMGYQD----ERRYPDFSFISKSGDFTHVI 54 Query: 69 MAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + +TH H DH GAL P+Y + L R + Sbjct: 55 DCVIVTHFHLDHIGALPYFTEVCGYDGPIYMTYPTKALAPLMLEDYRKVMVERKGEQEQF 114 Query: 127 DKVDVGAFSIESVRV------------------NHSIPETMALVIRSPVGNIVHTGDWKL 168 + + + V + +++ +V+TGD+ + Sbjct: 115 SVLQIQKCMKKVTAVDLRQTIKVGADLEFRAYYAGHVLGAAMFWVKAGDDTVVYTGDYNM 174 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKG 226 D LG I L+ +ST A R+ E+ K ++ A G Sbjct: 175 TPDRHLGA-------AQIDRLEPDLLITESTYATTVRDSKRAREREFLKAVHK-CVAAGG 226 Query: 227 CVLVTTFSSSVSRIRSII----DIAEQIGRKIVLL---GSSLKRVVSVAIDVGIIKKDQL 279 VL+ F+ + R + + + E+ + + G +++ V + ++ Sbjct: 227 KVLIPVFA--LGRAQELCILLDEYWERTNLDMPIYISAGLTMQANVYY-KLLISWTNQKV 283 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTVIF 330 + + + + +I P + + G ++ +E + +I Sbjct: 284 KDTYVTRNTFDFKHVIPFERSKIDAPGPCVLFATPGMLSGGLSLEVFKHWAPSESNMIIL 343 Query: 331 S---------SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 S+ +PG I K ++ ++ + S H + + + Sbjct: 344 PGFCVAGTVGSKLMPGKPAKIDLDKRTTLDVRCQIQH------LSFSAHTDAKGILDLVR 397 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 + P+ +V +HGE + L + P + L +V Sbjct: 398 HVAPRNVVLVHGEKPKM---AILKKKISSDLCIPCYDPANLETVEITPRCPIKVGVSKQF 454 Query: 442 KDGFLIGKFADLGI-AKRRQLSFVGHLS 468 + L K + R + G + Sbjct: 455 LESNLKKKDRQFQLPRAREDILVNGFVI 482 >gi|274326663|ref|NP_001094578.1| integrator complex subunit 11 [Bos taurus] gi|152941100|gb|ABS44987.1| related to CPSF subunits 68 kDa [Bos taurus] Length = 599 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 143/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFSD----DRRFPDFSYITRS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPSLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADSPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPENVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 441 >gi|195995883|ref|XP_002107810.1| hypothetical protein TRIADDRAFT_19764 [Trichoplax adhaerens] gi|190588586|gb|EDV28608.1| hypothetical protein TRIADDRAFT_19764 [Trichoplax adhaerens] Length = 636 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 69/454 (15%), Positives = 142/454 (31%), Gaps = 62/454 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L PLG E+G + + Y K IM+DCG+ GV+ P I Sbjct: 20 SDLLSIKPLGAGQEVGRSCHIIQY----KNKTIMLDCGI---HPGRHGVEA-LPYTDIIA 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH GAL V+ + + Sbjct: 72 E--DQIDLLLISHFHLDHCGALPWFLERTSFKGRVFMTHATKAIYRWLLADYVKVSNIST 129 Query: 111 ------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + K + I + +V H + +I I++T Sbjct: 130 DQMLYTEKDLEKSMTKIETIHFHQEKEVNGIKFWCYNAGH-VLGAAMFMIEIAGVKILYT 188 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIM 221 GD+ +D L I + L+ +ST + I EK ++DI+ Sbjct: 189 GDFSRQEDRHLMA-------AEIPSVKPDVLIIESTYGVHIHEKREIREKRFTSTVHDIV 241 Query: 222 KNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 C++ ++ R + ++ + E I S K+ ++V Sbjct: 242 NRGGRCLI---PVFALGRAQELLLILDEYWSNHTELHDIPIYYASSLAKKCMAVYQTYVS 298 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + + + P + LSR Sbjct: 299 AMNDKIRNQIAISNPFIFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFEKWCTD 358 Query: 324 EKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ V+ + + G + ++ + + + + + S H + Sbjct: 359 SKNGVVIAGYCVEGTLAKEVMSEPEEVLSMSGQKLARKLSVDYISFSAHTDYEQTSEFIR 418 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + P ++ +HGE ++ K ++E Sbjct: 419 MLMPPHIILVHGEQNEMMRLKTALVREYQENPEI 452 >gi|328766828|gb|EGF76880.1| hypothetical protein BATDEDRAFT_14507 [Batrachochytrium dendrobatidis JAM81] Length = 475 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 69/475 (14%), Positives = 144/475 (30%), Gaps = 71/475 (14%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M +++ + +PLG ++G + L GS + IM DCG+ D FPD Sbjct: 1 MSSKQPFIRVIPLGAGQDVGRSCVLVTMGSKN----IMFDCGMHMGYSDH----RRFPDF 52 Query: 59 TFIMKERK---NLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER 113 T+I K + + I+H H DH GAL P+Y + + R Sbjct: 53 TYISKSGDYTSMIDCVIISHFHLDHCGALPYFTEICGYDGPIYMTGPTKAIAPILLEDMR 112 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRS 155 VD+ + + VN + +R Sbjct: 113 KVVVERKGETDFFTSVDIKNCMQKVIAVNLMETVQVDAQLEIRPYYAGHVLGAAMFYVRV 172 Query: 156 PVGN-----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 G +V+TGD+ + D LG I ++ ++T A Sbjct: 173 TDGYGVTQSVVYTGDYNMTPDRHLGA-------AQIDGCEPDLIITETTYA-TTIRDSKR 224 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---------GRKIVLLGSSL 261 + + + G V ++ R + ++ + E + Sbjct: 225 ARERDFLKKVHDCVSGGGKVLVPVFALGRAQELLILIESYWRRMDDLCDKVPVYFSTGLT 284 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----- 316 +R + + + ++ + + EP + + + G Sbjct: 285 ERANEYYKLFISWTNENVKSALVERNMFDFAHIRSWSHSFADEPGAMVLFATPGMLHAGT 344 Query: 317 ----MRNVKLAEKDTV----IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + K+ + + + +A + N + V + + + S Sbjct: 345 SLEVFKKWCHDPKNMIIMPGYCVAGTVGAKVLAGEKVINVDRFTKLNVNLQISN--LSFS 402 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKML 422 H + ++ + + + ++ +HGE + K + + GI C P + Sbjct: 403 AHADAKGILQLIRASKAKNVMLVHGEKKKMAQLKIRIERELGIPCFDPANGAAIC 457 >gi|89267474|emb|CAJ83498.1| cleavage and polyadenylation specific factor 3 [Xenopus (Silurana) tropicalis] Length = 692 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 181 LLYTGDFSRQEDRHLMA-------AEIPNVKPDILIIESTYGTHIHEKREEREAR-FCNT 232 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 233 VHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 292 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 293 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 352 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 353 TDKRNGVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEF 412 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 413 VRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVEIEVHN 454 >gi|297484217|ref|XP_002694180.1| PREDICTED: cleavage and polyadenylation specific factor 3-like [Bos taurus] gi|296479091|gb|DAA21206.1| cleavage and polyadenylation specific factor 3-like [Bos taurus] Length = 599 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 72/467 (15%), Positives = 143/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFSD----DRRFPDFSYITRS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 XGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPSLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADSPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPENVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 441 >gi|227830721|ref|YP_002832501.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|227457169|gb|ACP35856.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|323475074|gb|ADX85680.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A] gi|323477805|gb|ADX83043.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4] Length = 519 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 148/432 (34%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 105 LGGGREVGRSAIEVG----NSDSSIILDYGVNFDEKDN-------PNFP-LQEVPNRVKG 152 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASPFAIGLLEAKRVYE------RVSKKIPCISF 123 ++HAH DH GAL L+ VY + + E ++ + + Sbjct: 153 FVVSHAHLDHVGALPIYQIGSLNTKVYGTVATRIITEVMLKDFLKLSGSKIPYEWVEVRK 212 Query: 124 QAGDKVDVG--------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + +G + + H IP + + + S G + TGD L + ++ Sbjct: 213 TMDNFMAIGYGEETEIDSMKVSLYNAGH-IPGSSIIKVSSEKGAVAFTGDINLTETKLMK 271 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + +IGN +L + E + + ++++ + G VLV FS Sbjct: 272 ----PAEIESIGNANVLVMESTYGKFNHPNRKDVENEFYEKVLEVVE-SGGTVLVPAFS- 325 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + K L Y + Sbjct: 326 -LARSQEVLSVLAERDFPYPVYYDGMSREITEIMLGFREFLNKPDLLKKAYDNFNYVKGW 384 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + + K+ + S + Sbjct: 385 EDRHRAWKERGVIVASAGMLKGGPAVYYFKKLSESSKNAIFLVSYQAIN--TPGRRLLEM 442 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + + S H L + + I+ + +V +HG P + + +L Q Sbjct: 443 GKFDEYSGLLKARLEIFDFSSHAGRRQLLEIVKSIKGLEKVVLVHGSPDNETSLADLIKQ 502 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 503 ETGVEVIIPENG 514 >gi|126460354|ref|YP_001056632.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250075|gb|ABO09166.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 428 Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 151/434 (34%), Gaps = 48/434 (11%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG GE+G L I++D GV+F + P VFP + ++L A Sbjct: 6 LGGAGEVGRLAVLIRTAYNG----ILLDYGVNFDAEGRP----VFP----LHVRPRDLTA 53 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIPCI--- 121 +F++HAH DH G + L+ P+YA+P + L + K + + Sbjct: 54 VFLSHAHLDHSGGVPTLYVTTKTPLYATPLTMELSDLMYADAIKLSGYYLPYTQEEVREV 113 Query: 122 -----SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 G+ V++G ++ + +P + VI +V TGD+ L D +L Sbjct: 114 MSSAFPLTYGEPVEIGRDAVLTTYNAGHVPGSAIGVIEVEGATVVFTGDFNLSDTNLL-R 172 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D ++ + ++ ++T A + + + + + +G V S + Sbjct: 173 GADLYNI----PKNPDVVVMEATYASSTHPPRDKME-TEFVNAVREVVEGGGTVLIPSFA 227 Query: 237 VSRIRSIIDIAEQIGR---KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 + R + I+ + I + G + + + + +++ L+ + Sbjct: 228 LGRAQEILLTLVKNKLDSYPIYIDGLARQINQIIGRYLHLVRDPALYKKALEVAIEVPNA 287 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + + A A + +G + + +K+ + S P K Sbjct: 288 YVRKGAAEEPSIIIAPAGMLKGGAALFYFKRLAANKKNGIFLPSFQAPNTPGFEILSKGH 347 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 V +G + E S H ++L+ + H + L+ H + A Sbjct: 348 AVVEGATIKVEARIEWFDFSAHAGRDELRAFIKH--------FHEDTNILLVHTDPAASS 399 Query: 409 GIACVPPVRNGKML 422 ++ Sbjct: 400 PFVKQLIEEGRRVY 413 >gi|255084461|ref|XP_002508805.1| predicted protein [Micromonas sp. RCC299] gi|226524082|gb|ACO70063.1| predicted protein [Micromonas sp. RCC299] Length = 728 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 137/474 (28%), Gaps = 63/474 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV--FPDIT 59 K++ L +PLG E+G + L Y K +M DCGV PG + P Sbjct: 23 KDDMLEIMPLGAGSEVGRSCVLASY----KNKTVMFDCGV------HPGYAGIASLPYFD 72 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVSKK 117 + + A+ ITH H DH A+ + + + + + K Sbjct: 73 --EVDLSTVDAMLITHFHLDHCAAVPFVVGRTNFKGRILMTHPTKAIFAMLMNDFVKLNK 130 Query: 118 IPCI------------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 ++D+ + R H + + Sbjct: 131 QGDNSEALFGEKDVQECMRRIEVIDFHQEMDIDGVKVTPYRAGH-VLGACMFYVDIGGLR 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ D L + ++ ++T + + E+ ++ Sbjct: 190 VLYTGDYSRTPDRHLPG-------ADLPPIPPHVVIVEATYGVSPHSPREERE-RRFTDM 241 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDV 271 + + V ++ R + ++ I E G I + KR ++V Sbjct: 242 VHRVLTRGGKVLLPVVALGRAQEVLLILEDYWVKHPELKGVPIYQASALAKRAMTVYQTY 301 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQ----------GEPRSALAQLSRGEMRNVK 321 + + + E + + +A S P + LSR + Sbjct: 302 INVLNSDMKAAFEESNPFVFNHVNHLANSSGLDDVGPCVVLATPSMLQSGLSRDLFESWC 361 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI A+ G + K G + + S H ++ Sbjct: 362 GDSKNGVIICDFAVQGTLAREILSDCKTVTSRTGQELPLRMTVDAISFSAHADYPQTQQF 421 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIID 433 + P +V +HGE + K + A + I Sbjct: 422 LDALAPPHVVLVHGEAGEMGKLKRALEGKAAADGKKMMVYNPKNCQAVEIMHSQ 475 >gi|51467896|ref|NP_001003836.1| cleavage and polyadenylation specificity factor subunit 3 [Danio rerio] gi|49619053|gb|AAT68111.1| cleavage and polyadenylation specificity factor 3 [Danio rerio] Length = 690 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 63/464 (13%), Positives = 145/464 (31%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMVDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I + L+ +ST E+ + + Sbjct: 181 LLYTGDFSRQEDRHLMA-------AEIPSVKPDILITESTYGTHIHEKREEREARFCNTV 233 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ +G L+ F+ + R + ++ I ++ + SSL + Sbjct: 234 HDIVNR-EGRCLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 290 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + + P + LSR + Sbjct: 291 TYVNAMNDKIRKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 350 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 351 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 410 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 411 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 454 >gi|156379813|ref|XP_001631650.1| predicted protein [Nematostella vectensis] gi|156218694|gb|EDO39587.1| predicted protein [Nematostella vectensis] Length = 688 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 65/438 (14%), Positives = 143/438 (32%), Gaps = 62/438 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K +M+DCG+ + GV+ P + I Sbjct: 17 ESDLLRITPLGSGQEVGRSCHILEF----KGKKVMLDCGI---HPGMTGVES-LPFLDEI 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + + ++H H DH G+L L V+ + + Sbjct: 69 D--TAEIDLLLVSHFHLDHCGSLPWLLEKTTFKGRVFMTHATKAIYRWLLSDYVKVSNIA 126 Query: 111 -------YERVSKKIPCISF-QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + K + I + +VG H + ++ I++ Sbjct: 127 AEDMLFTESDLEKSMDKIETLHFHQEKEVGGIKFWCYHAGH-VLGACMFMLEIAGVKILY 185 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIYDI 220 TGD+ +D L I + L+ +ST E+ + ++DI Sbjct: 186 TGDFSRQEDRHLMA-------AEIPSISPDVLIIESTYGTHIHEKREEREARFTGTVHDI 238 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVG 272 + C++ ++ R + ++ I ++ I K+ +SV Sbjct: 239 VNRGGRCLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASQLAKKCMSVFQTYV 295 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKL 322 D++ + + + + + Q + P + LSR Sbjct: 296 NAMNDKIKKQIAISNPFVFKHISNLKSIDQFDDIGPSVVMASPGMMQSGLSRELFEQWCT 355 Query: 323 AEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 ++ VI + + G + + + G ++ + + + S H Sbjct: 356 DRRNGVIIAGYCVEGTLAKNLMSEPEEVQTMSGQKIPRKCSVDYISFSAHTDFEQTSEFI 415 Query: 381 QWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 416 RILKPPHIVLVHGEQNEM 433 >gi|327401049|ref|YP_004341888.1| KH-domain/beta-lactamase-domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316557|gb|AEA47173.1| KH-domain/beta-lactamase-domain protein [Archaeoglobus veneficus SNP6] Length = 634 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 43/273 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + + LGG E+G + L + I+IDCGV+ + L P++ + Sbjct: 176 EEKWVRVTFLGGSREVGRSCYLL----QTPESKILIDCGVNV-SNIQHSPYLYVPEVQPL 230 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LE-AKRVY 111 ++ A+ ITHAH DH G + L+ + P+Y +P L +E A R Sbjct: 231 ----DSIDAVVITHAHLDHCGLVPILYKYGYKGPIYMTPPTRDLMVLLQLDFIEVAAREG 286 Query: 112 ERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I + + + H + +A I + NI Sbjct: 287 TPTPYESSYIREALKHTIPLDYGVVTDISPDVRLTFYNAGHILGSAIAHFHIGEGLYNIA 346 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+K + + T+ L AL+ ++T + + + ++ + I Sbjct: 347 FTGDFKFERTRLFDRAETNFPRLE--------ALIMEATYGGSQDFQPTRREAEEKLISI 398 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 + G VL+ TF+ V R + ++ E+ Sbjct: 399 INETLKNGGKVLIPTFA--VGRSQEVMIALEEA 429 >gi|238620212|ref|YP_002915038.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|238381282|gb|ACR42370.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] Length = 519 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 148/432 (34%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 105 LGGGREVGRSAIEVG----NSDSSIILDYGVNFDEKDN-------PNFP-LQEVPNRVKG 152 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQ- 124 ++HAH DH GAL L+ VY + +L+ + + Sbjct: 153 FVVSHAHLDHVGALPIYQIGSLNTKVYGTVATRIITEVMLKDFLKLSGSKIPYEWVEVRK 212 Query: 125 ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G+++++ + + H IP + + + S G + TGD L + ++ Sbjct: 213 TMDNFMAIGYGEEMEIDSMKVSLYNAGH-IPGSSIIKVSSEKGAVAFTGDINLTETKLMK 271 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + +IGN +L + E + + ++++ + G VLV FS Sbjct: 272 ----PAEIESIGNANVLVMESTYGKFNHPNRKDVENEFYEKVLEVVE-SGGTVLVPAFS- 325 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + K L Y + Sbjct: 326 -LARSQEVLSVLAERDFPYPVYYDGMSREITEIMLGFREFLNKPDLLKKAYDNFNYVKGW 384 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + + K+ + S + Sbjct: 385 EDRHRAWKERGVIVASAGMLKGGPAVYYFKKLSESSKNAIFLVSYQAIN--TPGRRLLEM 442 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + S H L + + I+ + +V +HG P + + +L Q Sbjct: 443 GKFDEYSGLLRARLEIFDFSSHAGRRQLLEIVKSIKGLEKVVLVHGSPDNETSLADLIKQ 502 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 503 ETGVEVIIPENG 514 >gi|169830974|ref|YP_001716956.1| beta-lactamase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637818|gb|ACA59324.1| beta-lactamase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 519 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 80/504 (15%), Positives = 151/504 (29%), Gaps = 124/504 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL------------------------ 48 G IG N L GS S +++D G +F + + Sbjct: 10 GADCIGGNKILLEDGSAS----LLLDFGTNFKAEGMYFDEFLNPRTTFGFSDLLALDILP 65 Query: 49 PGVDLVFPDITFI----------MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS 98 P +L PD + + + ++H H DH G L L +P+Y S Sbjct: 66 PLQNLYRPDFEYPGVWERFAGHPACRPVEVHGVLLSHPHLDHCGHLTYLRQ--DIPIYTS 123 Query: 99 PFAIG------------------------LLE---------------------------A 107 + L+ A Sbjct: 124 LASAAVCKALQDTGSGEVCYAVPRELRDGLIRTADYRRVPAEQRPYRVFGCSSVNPEVAA 183 Query: 108 KRVYERVSKKIPCISFQAGDK-VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 S+ + C + D D+G + V+HS+P A I++ +++TGD Sbjct: 184 FWERCDASRCLSCTPLEPCDTETDIGGLRVRFWPVDHSVPGAGAFGIKTSADWVIYTGDL 243 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 +L + L+C+ T+ G ++E+ + N ++ K G Sbjct: 244 RL---HGKRGWLTGQFISEAAKLKPAVLICEGTHPEV-GKPVTEEEVAANCFEAAKRKSG 299 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 V+ +V R+ S ++IA + R +VL + ++ G + Sbjct: 300 LVVADFGPRNVERLLSFLEIAGETDRLLVLTPKDVY-ILEALRAAGEPGVPDPYADSRIA 358 Query: 287 GLY-------PREQLIVIATGSQGEPRSALAQLSRGE-------------MRNVKLAEKD 326 E ++ G + R A + + + + + Sbjct: 359 LYVCPKAVRQKWEDALLARFGERAPERLVNAAKVKTDQGSFILCFSYYDFHAFLDIEPRG 418 Query: 327 TVIFSSRAIPGNEVA------IGHIKNRL-VEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 S + NE + + + + E H SGH + ++ M Sbjct: 419 GTYIYSSSEAFNEEMLLDHEKVRNWIDFFGFRFYGSLGREREGSGFHASGHIHGPGIEEM 478 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKE 403 + IRP++L+ +H E E Sbjct: 479 VETIRPEILIPVHTENRDFFRRFE 502 >gi|294495430|ref|YP_003541923.1| KH-domain/beta-lactamase-domain protein [Methanohalophilus mahii DSM 5219] gi|292666429|gb|ADE36278.1| KH-domain/beta-lactamase-domain protein [Methanohalophilus mahii DSM 5219] Length = 637 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 40/272 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + IMIDCGV+ DD L P++ + Sbjct: 177 KDQWVRLTSLGGCREVGRSCFLL----STPESKIMIDCGVNVGSDDDMTPYLYIPEVQPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA---IGLLEAKRVY------ 111 + A+ ITHAH DH G + L+ + P+Y + + LLE + Sbjct: 233 ----NQIDAVVITHAHLDHQGLVPLLYKYGYDGPIYCTHPTRDLMVLLELDFIDVAAKDG 288 Query: 112 ERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 +R+ + + + + + H I ++ I + N+V Sbjct: 289 KRIPYESADVRNALKHSIVLEYEEVTDIAPDIKLTFHNAGHIIGSAVSHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + ++ +ST + K +KN+ I+ Sbjct: 349 ITGDFKYGPTRLFNPAVN--KFPR-----VETVITESTYGASNSMQPALKDAEKNLQRII 401 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 K +G VL+ F+ V R + ++ + E+ Sbjct: 402 KETIDRQGVVLIPAFA--VGRSQEVMIVIEEA 431 >gi|227827984|ref|YP_002829764.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|227459780|gb|ACP38466.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] Length = 519 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 147/432 (34%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 105 LGGGREVGRSAIEVG----NSDSSIILDYGVNFDEKDN-------PNFP-LQEVPNRVKG 152 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQ- 124 ++HAH DH GAL L+ VY + +L+ + + Sbjct: 153 FVVSHAHLDHVGALPIYQIGSLNTKVYGTVATRIITEVMLKDFLKLSGSKIPYEWVEVRK 212 Query: 125 ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G+++++ + + H IP + + + S G + TGD L + ++ Sbjct: 213 TMDNFMAIGYGEEMEIDSMKVSLYNAGH-IPGSSIIKVSSEKGAVAFTGDINLTETKLMK 271 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + +IGN +L + E + + ++++ + G VLV FS Sbjct: 272 ----PAEIESIGNANVLVMESTYGKFNHPNRKDVENEFYEKVLEVVE-SGGTVLVPAFS- 325 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + K L Y + Sbjct: 326 -LARSQEVLSVLAERDFPYPVYYDGMSREITEIMLGFREFLNKPDLLKKAYDNFNYVKGW 384 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + K+ + S + Sbjct: 385 EDRHRAWKERGVIVASAGMLKGGPAVYYFKKLSENSKNAIFLVSYQAIN--TPGRRLLEM 442 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + S H L + + I+ + +V +HG P + + +L Q Sbjct: 443 GKFDEYSGLLRARLEIFDFSSHAGRRQLLEIVKSIKGLEKVVLVHGSPDNETSLADLIKQ 502 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 503 ETGVEVIIPENG 514 >gi|171185999|ref|YP_001794918.1| beta-lactamase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935211|gb|ACB40472.1| beta-lactamase domain protein [Thermoproteus neutrophilus V24Sta] Length = 425 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 76/413 (18%), Positives = 143/413 (34%), Gaps = 40/413 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE+G ++ +++D GVSF +D P VFP + Sbjct: 1 MRIKFLGGAGEVGR----LAVFIKTAANGVLLDYGVSFDAEDKP----VFP----LHVRP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKR--------VY 111 K+L A F++HAH DH G L L+ P+Y++P + L + K Sbjct: 49 KDLTATFLSHAHLDHSGGLPSLYVSTRTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTQE 108 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 E + G+ V++G ++ + IP + V+ +V TGD+ D Sbjct: 109 EVRETMASAVPLTYGEPVEIGRDAVLTAYNAGHIPGSAIGVLEIEGRVVVFTGDFNTVDT 168 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 +L D +L + ++ + +A EK + + +++ G VL+ Sbjct: 169 NLL-RGADLYNLPKAPD--VVIMEATYASADHPPREKLEKEFVQAVKEVLDQG-GTVLIP 224 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV-SVAIDVGIIKKDQLFL-----SDES 285 +F+ + R + I+ + G + L R + + + +D + Sbjct: 225 SFA--LGRAQEIMLTLVKHGVNAPIYIDGLARQINQIVGRYPYLLRDPTLYRKALEAAIE 282 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKLAEKDTVIFSSRAIPGNEVAIGH 344 + + P L + + + K+ + S P Sbjct: 283 VPNTYVRKGAIEEASVIITPAGMLKGGAALYYFKRLAQNRKNGIFLPSFQAPNTPGFEIL 342 Query: 345 IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPL 396 K V G V E S H ++ + ++ +H EP Sbjct: 343 SKGHAVVDGTLVKVEARLEWFDFSAHAGRREIVHFIKRFSADTRIILVHTEPK 395 >gi|328704356|ref|XP_001945120.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 3-like [Acyrthosiphon pisum] Length = 694 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 78/496 (15%), Positives = 156/496 (31%), Gaps = 68/496 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N++L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 19 NDKLTIKPLGAGQEVGRSCIVMEF----KGKKIMLDCGI---HPGLQGLDA-LPFVDLIE 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRV---------- 110 + + ITH H DH GAL Y + + Sbjct: 71 ANE--IDLLLITHFHLDHSGALPWFLLKTKFKGKCYMTHATKAIYRWLLSDYIKVSNIGT 128 Query: 111 ------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + K + I ++ DVG + H + +I +++T Sbjct: 129 EQMLYTEADLEKSMDRIETINFHEEKDVGGIRFCAYNAGH-VLGAAMFMIEIAGVKVLYT 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMK 222 GD+ +D L I L+ +ST E+ + + + + Sbjct: 188 GDFSRQEDRHLMA-------AEIPPSRPEILITESTYGTHIHEKREERERRFTMLVNDIV 240 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 N G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 241 NRGGRCLIPVFA--LGRAQELLLILDEYWGLHPELHDIPIYYASSLAKKCMAVYQTYINA 298 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + + E P + LSR Sbjct: 299 MNDRIKRQIAVNNPFVFKHITNLKSIDHFEDIGPCVIMASPGVMESGLSRELFEMWCTDS 358 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 K+ VI + + G + + ++ G ++ + + + S H + Sbjct: 359 KNGVIIAGYVVQGTLAKAILSEPEDITTMTGQKLPLKMSVDYISFSAHTDYQQTREFINI 418 Query: 383 IRPQVLVAIHGEPLHLV--------AHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDE 434 ++P +V +HGE + ++E + + +++ E Sbjct: 419 LKPPHIVLVHGEQNEMQRLKSALVREYEENSEDIKVYNPRNTVGVDFYFTGEKTAKVMGE 478 Query: 435 VVHGLFLKDGFLIGKF 450 + +D L G Sbjct: 479 IAVEKPAEDNVLSGVL 494 >gi|195452860|ref|XP_002073532.1| GK13096 [Drosophila willistoni] gi|194169617|gb|EDW84518.1| GK13096 [Drosophila willistoni] Length = 684 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 134/440 (30%), Gaps = 66/440 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 14 ESDLLQIKPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYVDLI 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + +FI+H H DH GAL + + + Sbjct: 66 E--ADEIDLLFISHFHIDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDFIKISNIS 123 Query: 111 -------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + I ++ DV + H + +I I++ Sbjct: 124 TDQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGH-VLGAAMFMIEIAGIKILY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L + L+ +ST ++ + ++ Sbjct: 183 TGDFSRQEDRHLMA-------AEVPPTKPDVLITESTYGTHIHEKREDRESRFTSLVQKT 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 G L+ F+ + R + ++ I ++ + SSL + I Sbjct: 236 VMQGGRCLIPVFA--LGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYIN 293 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + E P + LSR + Sbjct: 294 AMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTD 353 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+ VI + + G + G ++ + + S H Sbjct: 354 PKNGVIVAGYCVEG---TLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSE 410 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 + +RP +V +HGE + Sbjct: 411 FIRMLRPNHVVLVHGEQNEM 430 >gi|300706889|ref|XP_002995677.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01] gi|239604869|gb|EEQ82006.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01] Length = 500 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 70/461 (15%), Positives = 147/461 (31%), Gaps = 61/461 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG ++G + + + IM+DCG+ +D FPD + + K Sbjct: 1 MKIIPLGAGQDVGRSCIIV----NIEGRTIMLDCGMHMGYNDQ----RRFPDFSALSKTG 52 Query: 66 K---NLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + I I+H H DH GAL P+Y + ++ R Sbjct: 53 DFNKLIDCIIISHFHLDHTGALPFFTEICKYDGPIYMTKPTKAVIPILLEDFRKISAPKS 112 Query: 121 ISFQAGDKVDV-------------------GAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + D+ F I H I ++ ++V Sbjct: 113 SDGKFFSYQDIQNCLKKIITINFNETYKHDENFFITPYYAGHVI-GAAMFHVQVGSRSVV 171 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG +I L+ +ST R+ E+ K + D Sbjct: 172 YTGDYNMTPDRHLGA-------ASIPCLRPDLLITESTYGSITRDCRKSKEREFFKAVLD 224 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + G VL+ F+ + R + + + + I ++ ++ Sbjct: 225 -CVSNGGKVLIPIFA--LGRAQELCLLLDSHWERMQLKVPIYFSSGLTEKANNIYKQFLS 281 Query: 274 IKKDQLFLSDESFGLYPREQLI-----VIATGSQGEPRSALAQLSRGE----MRNVKLAE 324 + + + + ++ + + ++ L G + Sbjct: 282 YTNETIKKNAFNHNVFDFKHTTTFQKHFLDLNIPMVLFASPGMLHSGMSLKVFKEWCTDP 341 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWI 383 K+ VI + G N+ +E + + + S H + + + Sbjct: 342 KNLVIIPGYCVKGTVGDKVLNGNKEIEILGELKEIKIQVKNLAFSAHADAQGILNLIKMC 401 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +P+ ++ +HGE + K+ ++ V NG + + Sbjct: 402 QPKNVMLVHGEKSRISLLKKSIEKKFNIPVFKPANGTCINI 442 >gi|316972680|gb|EFV56345.1| putative metallo-beta-lactamase domain protein [Trichinella spiralis] Length = 562 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 61/426 (14%), Positives = 140/426 (32%), Gaps = 53/426 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ +PLG E+G + L G + +M+DCG+ +D + FPD ++I ++ Sbjct: 3 EIKIVPLGAGQEVGRSCILVTIGGKN----VMLDCGMHMGFND----ERRFPDFSYITQK 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + + P+Y + ++ R + Sbjct: 55 GKLDDFIDCVIISHFHLDHCGALPYMTEMVGYNGPIYMTIPTKAIVPVLLEDFRKVQVKY 114 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 F ++ + +++ + GD+ + D LG Sbjct: 115 RN----------DPFIF-----TSNMIKDCMNKVKTISLHEELMGDFNMTPDRHLGP--- 156 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 I L+ +ST A + + + V ++ R Sbjct: 157 ----AEIDRCRPDVLISESTYA-TTIRDSKRARERDFLKKVHDCINNGGKVLIPVFALGR 211 Query: 240 IRSIIDIAEQI----GRKIVLL-GSSL-KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 + + + E I + + ++ V +++ + ++ + Sbjct: 212 AQELCILLESYWERMNLSIPIYVSKGMAEKAVDYYKLFVTWTSEKIKKTFVKRNMFDFKH 271 Query: 294 LIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTVIFSSRAIPGN--EVAI 342 ++ P + + G + EK+ VI + G I Sbjct: 272 VLPFEDSFADTPGPMVVFATPGMLHSGQSLKIFKKWATNEKNMVIMPGYCVQGTVGSKLI 331 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 ++ +E G + + + + S H + ++ + P+ ++ +HGE + K Sbjct: 332 AGVRKLDLENGATLEVKLSVEYMSFSAHADSKGIVQLIRNCDPRHVLFVHGEDSKMEFLK 391 Query: 403 ELALQE 408 + + Sbjct: 392 QKVERM 397 >gi|229579615|ref|YP_002838014.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229581719|ref|YP_002840118.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284998234|ref|YP_003420002.1| hypothetical protein LD85_1977 [Sulfolobus islandicus L.D.8.5] gi|228010330|gb|ACP46092.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228012435|gb|ACP48196.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446130|gb|ADB87632.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 519 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 147/432 (34%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 105 LGGGREVGRSAIEVG----NSDSSIILDYGVNFDEKDN-------PNFP-LQEVPNRVKG 152 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASPFAIGLLEAKRVYE------RVSKKIPCISF 123 ++HAH DH GAL L+ VY + + E ++ + + Sbjct: 153 FVVSHAHLDHVGALPIYQIGSLNTKVYGTVATRIITEVMLKDFLKLSGSKIPYEWVEVRK 212 Query: 124 QAGDKVDVG--------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + +G + + H IP + + + S G + TGD L + ++ Sbjct: 213 TMDNFMAIGYGEETEIDSMKVSLYNAGH-IPGSSIIKVSSEKGAVAFTGDINLTETKLMK 271 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + +IGN +L + E + + ++++ + G VLV FS Sbjct: 272 ----PAEIESIGNANVLVMESTYGKFNHPNRKDVENEFYEKVLEVVE-SGGTVLVPAFS- 325 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + K L Y + Sbjct: 326 -LARSQEVLSVLAERDFPYPVYYDGMSREITEIMLGFREFLNKPDLLKKAYDNFNYVKGW 384 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + + K+ + S + Sbjct: 385 EDRHRAWKERGVIVASAGMLKGGPAVYYFKKLSESSKNAIFLVSYQAIN--TPGRRLLEM 442 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + + S H L + + I+ + V +HG P + + +L Q Sbjct: 443 GKFDEYSGLLKARLEIFDFSSHAGRRQLLEIVKSIKGLEKAVLVHGSPDNETSLADLIKQ 502 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 503 ETGVEVIIPENG 514 >gi|302346187|ref|YP_003814485.1| RNA-metabolizing metallo-beta-lactamase [Prevotella melaninogenica ATCC 25845] gi|302151166|gb|ADK97427.1| RNA-metabolizing metallo-beta-lactamase [Prevotella melaninogenica ATCC 25845] Length = 417 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 154/432 (35%), Gaps = 77/432 (17%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNL 68 G+ +IG + + + ID G + P + P DL+ DI I K Sbjct: 8 GLDQIGGCITEI----WTDSSRVFIDFGQNLPGNGKPTTPKEDDLMVADI--IGNNEKEH 61 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK----RVYERVSKKIPCI--- 121 A+F THAHEDH G L+ ++ + Y + LL K ++K Sbjct: 62 QAVFYTHAHEDHVG----LFRYIPLEQYIGEGSKELLLIKYNTLLERYELAKSANHQLQI 117 Query: 122 --------------------------------SFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + VG + HSI + Sbjct: 118 SDREAEQPEESYRTTKTLIDKLETFRTWKRAAPKECPVPITVGDIRVTPFFTCHSIYDAH 177 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 ++ + I HTGD++ I L+ + T R+ CI Sbjct: 178 MFLVEADGKRIWHTGDYRQHGYMGKALFPMLRRYA----TNIDLLITEGTMLKRKDKCIH 233 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-- 267 E + + + +M+ K V V ++ + R+ SI AE + + +L +KR + + Sbjct: 234 ECEVSRKMESVMQAFK-YVFVLASATDIERLASIKVAAETANKPLCILSLFMKRTMEIFT 292 Query: 268 ----AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 ++ G+ LF +D+ +G R ++ SQ + L Sbjct: 293 ERESSLSRGLFSFAPLFYTDKLYGKLKRRGFTIVVGTSQADKVKKLLDKL--------PQ 344 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 E+ +I+SS G +K N ++ + + +H SGH ++++ + Sbjct: 345 EETLLIYSSWD--GYYKNAEQVKANSKYKELREMFHNVVD--IHTSGHADKATIRKVIET 400 Query: 383 IRPQVLVAIHGE 394 +RP+ ++ IH E Sbjct: 401 VRPKEVICIHKE 412 >gi|255617320|ref|XP_002539829.1| conserved hypothetical protein [Ricinus communis] gi|223501937|gb|EEF22555.1| conserved hypothetical protein [Ricinus communis] Length = 168 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 70/172 (40%), Gaps = 7/172 (4%) Query: 387 VLVAIHGEPLHLVAHKELALQEGI--ACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDG 444 ++ +HGE HL A+ ELA++ G+ V +G ++ L I V G DG Sbjct: 1 HVMPVHGEWRHLRANGELAVRTGVAPENVVLAEDGVVVDLVDGRARAIGRVEVGHVYVDG 60 Query: 445 FLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVDIGIPAYDGDGGKIHKL 503 +G + ++ R L G +++ V++D+ G P + G D K Sbjct: 61 LSVGDVGESTLSDRLVLGEGGFIAITVVIDSATGRAVGTPSLSGRGFS----DDPKALDA 116 Query: 504 LLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 ++ V + + + +++ + + + + ++P++ + + Sbjct: 117 VVPLVEMELSRTEAEGITESHRIAQAVRRVVGRWVAETYRRRPMIVPTVIPV 168 >gi|55250298|gb|AAH85402.1| Cleavage and polyadenylation specific factor 3 [Danio rerio] gi|56207923|emb|CAI21234.1| novel protein similar to vertebrate cleavage and polyadenylation specific factor 3, 73kDa (CPSF3) [Danio rerio] gi|182889046|gb|AAI64567.1| Cpsf3 protein [Danio rerio] Length = 690 Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 63/464 (13%), Positives = 145/464 (31%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I + L+ +ST E+ + + Sbjct: 181 LLYTGDFSRQEDRHLMA-------AEIPSVKPDILITESTYGTHIHEKREEREARFCNTV 233 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ +G L+ F+ + R + ++ I ++ + SSL + Sbjct: 234 HDIVNR-EGRCLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 290 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + + P + LSR + Sbjct: 291 TYVNAMNDKIRKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 350 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 351 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 410 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 411 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 454 >gi|147905468|ref|NP_001088278.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus laevis] gi|54038587|gb|AAH84286.1| LOC495111 protein [Xenopus laevis] Length = 692 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 60/462 (12%), Positives = 136/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 15 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 68 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 69 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 121 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 122 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 180 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 181 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 232 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 233 VHDIVNRGGRSLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 292 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 293 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 352 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I +V + + + + + S H Sbjct: 353 TDKRNGVIIAGYCVEGTLAKHIMSEPEEIVTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 412 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 413 VRALKPPHVILVHGEQNEMARLKAALIREYEDNEEVDIEVHN 454 >gi|325294571|ref|YP_004281085.1| RNA-metabolising metallo-beta-lactamase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065019|gb|ADY73026.1| RNA-metabolising metallo-beta-lactamase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 418 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 78/425 (18%), Positives = 146/425 (34%), Gaps = 66/425 (15%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +P+GG EIG + LY G I+ID G+ F + PD + L Sbjct: 6 IPIGGGNEIGASSYLYVLGGVK----ILIDSGIRFNAKEPY------PDFELLKVLAPEL 55 Query: 69 MAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLL-----------------EAKRV 110 AIF+THAH DH G++H L S P+Y + LL E + Sbjct: 56 DAIFVTHAHIDHCGSIHILSSLYPDTPIYTTHETAQLLSLMVEDAIKVKYIKEKSEDEWK 115 Query: 111 YERVSKKIPCI--SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWK 167 ++ + + D +++ ++ + H I A I +I HTGD Sbjct: 116 EYKLLDETFMRLERREFFDTLNIKDIEVKFLPAGH-ILGAAAFQINYDDSSSIYHTGDIS 174 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 L + + + + L+ +ST + EK +++ I+K + Sbjct: 175 LQPQKTVEA-------AHLPSSSVNLLVTESTYYYSNRSFEKEKAVEEFYQTIVKVFERK 227 Query: 228 VLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGSS------LKRVVSVAIDVGII 274 + ++ R + II + G + + G + + +++ + Sbjct: 228 GRILIPVFALGRAQEIILLLTEGMKAGKIPPMTVYVDGLAREVSNIYENLLNKEFFNYYV 287 Query: 275 KKDQLF----LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + + I+ +G E S + E++ +IF Sbjct: 288 QPAPTYEGIDFLEACEENLREANCIISTSGMLME-----NTPSYIYASLLSRNERNAIIF 342 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 S + E + N + + + H S H +L+ + + P+ V Sbjct: 343 SGYLVE--ESFGYRLLND---REILKNFKCEIKRHHFSAHSDKKELQDLINILSPRKTVF 397 Query: 391 IHGEP 395 IHG P Sbjct: 398 IHGYP 402 >gi|320170221|gb|EFW47120.1| integrator complex subunit 11 [Capsaspora owczarzaki ATCC 30864] Length = 661 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 67/505 (13%), Positives = 149/505 (29%), Gaps = 70/505 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-- 63 + PLG ++G + L G + IM DCG+ +D FPD I + Sbjct: 3 IRVRPLGAGQDVGRSCLLVSIGGKN----IMFDCGMHMGYNDA----RRFPDFASIKRTG 54 Query: 64 -ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + ++H H DH GA+ P+Y + + R Sbjct: 55 PYTDVIDCVIVSHFHLDHCGAIVHFSEVCGYDGPIYMTHPTKAICPILLEDYRKLTVERK 114 Query: 121 ISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIVH 162 ++ A + + VN + +R ++V+ Sbjct: 115 GETNFFTSANIKACMKKVIAVNLHESVRVDDEIEIKAYYAGHVLGAAMFHVRVGSESVVY 174 Query: 163 TGDWKLDDD-AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+ + D + D+ L+ +ST A + + + I Sbjct: 175 TGDFNMTPDRHLGAAWIDRCR--------PDLLITESTYATTIRDSKRNRE-GEFLRKIH 225 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSS--LKRVVSVAIDVGIIK 275 + + V ++ R + + + E G + + S+ + + Sbjct: 226 ECVEQGGKVLIPVFALGRAQELCILVETYWERLGLTVPVYFSAGLTAKANNYYKLFITWT 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEKD 326 ++ + ++ + + P + A +S R +K+ Sbjct: 286 NQKIKRTFVERNMFEFKHIKPFDRAFLDNPGPMVLFATPGMLHAGMSLDAFRKWAPNDKN 345 Query: 327 TV----IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 V + + +A + + + S H + ++ + Sbjct: 346 MVILPGYCVAGTVGNKVLAGHKQIEMPDRARTVIDVRLSVQNLSFSAHADAKGIVQLIRH 405 Query: 383 IRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 P+ ++ +HGE ++ + GI C + + I V ++ Sbjct: 406 AEPRNVMLVHGEKAKMAFLKAKIISEIGIPC---FDPANGATVTIETAHPISVSVPPNYV 462 Query: 442 KDGFLIGKFADLGIAKRRQLSFVGH 466 D + +RR + +G Sbjct: 463 LD--SVLDAT----RQRRNAAEMGL 481 >gi|221106537|ref|XP_002161150.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 677 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 72/481 (14%), Positives = 145/481 (30%), Gaps = 71/481 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPD 57 +++ L PLG E+G + + K +++D G+ P D LP +D + P Sbjct: 6 ESDLLRITPLGAGQEVGRSCIFIEF----KGKKLLLDLGI-HPGYNGLDSLPFIDEIDP- 59 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----- 110 + + I+H H DH G L V+ + + Sbjct: 60 --------GEVDLLLISHFHLDHCGGLPWFLEKTHFKGRVFMTHPTKAIYRWLLADYIKV 111 Query: 111 -----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 + + K + I + +V + H + +I Sbjct: 112 SNISADQMLYTEKDLEKSMDKIETMHFHQEKEVSGIKFWAYNAGH-VLGAAMFMIEIAGV 170 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKN 216 NI++TGD+ +D L I N L+ +ST EK Sbjct: 171 NILYTGDFSRQEDRHLMS-------AEIPNISPDVLIMESTYGTHVHEKREQREKRFTST 223 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS--- 266 I++I+ C++ ++ R + ++ I ++ V SSL + Sbjct: 224 IHNIISRGGRCLI---PVFALGRAQELLLILDEYWNQHPELQDVPVYYASSLAKKCMAVY 280 Query: 267 --VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG------EPRSALAQLSRGEMR 318 + + Q+ +S+ + + + G P + LSR Sbjct: 281 QTYISAMNEKIRRQISISNPFVFKHISNLKGIDSFDDIGPSVVLASPGMMQSGLSRELFE 340 Query: 319 NVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 ++ VI + + G + + + G R+ + + S H + Sbjct: 341 TWCTDPRNGVIIAGYCVEGTLAKELMSEPEEVTAMNGQRMKRNISIDYISFSAHADFEQI 400 Query: 377 KRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEV 435 +RP +V HGE + + ++ + E Sbjct: 401 SEFVDILRPPHIVLNHGEQNEMSRLKAAIIRDFEDRGISNIQVYNPKNCQSVELHFRGEK 460 Query: 436 V 436 + Sbjct: 461 M 461 >gi|91772428|ref|YP_565120.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242] gi|91711443|gb|ABE51370.1| RNA-metabolizing metallo-beta-lactamase protein [Methanococcoides burtonii DSM 6242] Length = 636 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 134/441 (30%), Gaps = 78/441 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LGG E+G + L + IMIDCGV+ DD L P++ + Sbjct: 177 KDHWVRVTSLGGCKEVGRSCFLL----STPESKIMIDCGVNVGSDDNMTPYLYLPEVQPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 + A+ ITHAH DH G + L+ + P+Y + + ++ Sbjct: 233 ----NQIDAVVITHAHLDHQGLVPLLYKYGYEGPIYCTSPTRDIMTLLQLDFIDVAAKEG 288 Query: 113 RVSKKIPCISFQAGDKVDV----------GAFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + A + H I ++ I + N+V Sbjct: 289 KKPPYESTNVRDALKHTIALDYEEVTDIAPDVKLTFHNAGHIIGSAISHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + ++ +ST S K +KN+ I+ Sbjct: 349 VTGDYKYGPTRLFDPAVN--KFPR-----VETVITESTYGAASAVQPSLKEAEKNLQQII 401 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 KN KG VL+ F+ V R + ++ + E + L G ++ A + Sbjct: 402 KNTLNNKGIVLIPAFA--VGRSQEVMIVLEDAIRRGIIDDVPVYLDG-----MIWEATAI 454 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR--------NVKLA 323 + L + + + + ++ + Sbjct: 455 HATYPEYLNNNLRKLIFQKGQNPFLAECFKPVDSNDLRKKIIEDPHPCVILSTSGMMNAG 514 Query: 324 EKDTVIFSSRAIPGNEVAI----------GHIKNRLVEQGVRVIAEDAECPVH------- 366 + P N + I+ E V ++ Sbjct: 515 PVMEYFKAFAPDPNNTLVFVGYQADGTLGRRIQKGWKEIPVSSKGGTEVVKMNMGVEVVD 574 Query: 367 -VSGHPYPNDLKRMYQWIRPQ 386 SGH L ++ ++PQ Sbjct: 575 GFSGHSDRKQLMEYFKKMKPQ 595 >gi|330508618|ref|YP_004385046.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP-6] gi|328929426|gb|AEB69228.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP-6] Length = 635 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 108/314 (34%), Gaps = 49/314 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCG++ DD L P++ + Sbjct: 177 KDQWVRITTLGGCREVGRSCMLL----STPESRIIIDCGINVGSDDSATPYLYVPEVYPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 + A+ +THAH DH G + L+ + P+Y +P L +E Sbjct: 233 ----NQIDAVVLTHAHLDHAGLVPMLYKYGYEGPIYCTPPTRDLFVLLQLDYIEIAGREG 288 Query: 113 RVSKKI---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV--GNIV 161 I+ GD D+ + ++ I + N+ Sbjct: 289 NRLPYDSGMIREALKHTITLNYGDVTDIAPDTKLTMHNAGHILGSSIAHFHIGDGLYNVA 348 Query: 162 HTGDWKLDDDAI-LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+K + + V + L L+ ++T S K + N+ + Sbjct: 349 FTGDYKFERTRLFDPAVCNFPRLE--------TLVTEATYGGTNSIQPSRKEAEVNLIKV 400 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +K G V++ FS V R + ++ + E+ + L G + Sbjct: 401 VKETINRGGKVVIPAFS--VGRSQEVMVVLEEAIRKKVIDEVPVCLDGMIYEATAIHTTY 458 Query: 271 VGIIKKDQLFLSDE 284 + D L Sbjct: 459 PEYLNNDLRDLIFH 472 >gi|312372474|gb|EFR20427.1| hypothetical protein AND_20124 [Anopheles darlingi] Length = 692 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 68/459 (14%), Positives = 137/459 (29%), Gaps = 70/459 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ +V PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 18 ESDLMVIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLI 69 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + +FI+H H DH GAL + + + I Sbjct: 70 D--ADQIDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKVSNIS 127 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ D+ + H + +I +++ Sbjct: 128 TDQMLYTEADLEASMEKIETINFHEERDILGVRFWAYNAGH-VLGAAMFMIEIAGIRVLY 186 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I L+ +ST ++ + ++ + Sbjct: 187 TGDFSRQEDRHLMA-------AEIPAMRPDVLITESTYGTHIHEKREDRENRFTSLVQKI 239 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA------ 268 G L+ F+ + R + ++ I ++ + SSL + Sbjct: 240 VTQGGRCLIPVFA--LGRAQELLLILDEYWSQNPDLQEIPIYYASSLAKKCMAVYQTYIN 297 Query: 269 -------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + I G+ + + P + LSR Sbjct: 298 AMNDKIRRQIAINNPFVFRFISNLKGIDHFDDVGPCVV--MASPGMMQSGLSRELFETWC 355 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K+ VI + + G + G ++ + + S H Sbjct: 356 TDPKNGVIIAGYCVEG---TLAKTILFEPEEITSMNGQKLPLNMSVDYISFSAHTDYQQT 412 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + ++P +V +HGE + K ++E A Sbjct: 413 SEFIRLLQPTHVVLVHGEQNEMGRLKSALMREYEANPKI 451 >gi|66816359|ref|XP_642189.1| integrator complex subunit 11 [Dictyostelium discoideum AX4] gi|74856745|sp|Q54YL3|INT11_DICDI RecName: Full=Integrator complex subunit 11 homolog gi|60470287|gb|EAL68267.1| integrator complex subunit 11 [Dictyostelium discoideum AX4] Length = 744 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 71/482 (14%), Positives = 150/482 (31%), Gaps = 75/482 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + +PLG ++G + + G+ + IM DCG+ +D FPD ++I K Sbjct: 1 MTIKVVPLGAGQDVGRSCVIVTIGNKN----IMFDCGMHMGMNDA----RRFPDFSYISK 52 Query: 64 ER---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI 118 K + + ITH H DH GAL P+Y + + R Sbjct: 53 NGQFTKVIDCVIITHFHLDHCGALPFFTEMCGYDGPIYMTLPTKAICPILLEDYRKITVE 112 Query: 119 PCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNI 160 + + + VN + + ++ Sbjct: 113 KKGETNFFTAQMIKDCMKKVIPVNLHQTIKVDEELSIKAYYAGHVLGAAMFYAKVGDESV 172 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 V+TGD+ + D LG I L+ ++T A R+ E+ K I+ Sbjct: 173 VYTGDYNMTPDRHLGS-------AWIDQVKPDVLITETTYATTIRDSKRGRERDFLKRIH 225 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 + G VL+ F+ + R++ + + + I ++ Sbjct: 226 E-CVEKGGKVLIPVFA--LGRVQELCILIDSYWEQMNLGHIPIYFSAGLAEKANLYYKLF 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVI- 329 ++ + ++ + + + P + L L Sbjct: 283 INWTNQKIKQTFVKRNMFDFKHIKPFQSHLVDAPGAMVLFATPGMLHAGASLEVFKKWAP 342 Query: 330 --FSSRAIPGNEVAIGHIKNRL-------------------VEQGVRVIAEDAECPVHVS 368 + IPG +G + N+L +++ + + + S Sbjct: 343 NELNMTIIPGY-CVVGTVGNKLLTTGSDQQQQSKPQSQMVEIDKKTTIEVKCKIHNLSFS 401 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHL-VAHKELALQEGIACVPPVRNGKMLRLFPD 427 H + ++ + P+ ++ +HGE + +++ + G+ C P ++ Sbjct: 402 AHADAKGILQLIKMSNPRNVILVHGEKEKMGFLSQKIIKEMGVNCYYPANGVTIIIDTMK 461 Query: 428 PI 429 I Sbjct: 462 SI 463 >gi|329766588|ref|ZP_08258131.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136843|gb|EGG41136.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 421 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 167/451 (37%), Gaps = 60/451 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ LG E+G + G+ +++D GV F K P P+ + Sbjct: 1 MEIKV--LGAANEVGRS----GFLVNCDGTNLLLDYGVLFGKRGSP------PEYP-LHV 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKI- 118 + K+L AI ITHAH DH G + L+ + VYA+P L+E + ++ Sbjct: 48 KPKDLDAIIITHAHLDHSGNVPSLFVSGNTDVYATPPTFDLTRLLIEDMLKITKDAQPFG 107 Query: 119 ---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 +KV G + E H + ++++ S + +TGD K + Sbjct: 108 LPELNNMMRNAKEIGFREKVTKGNATFELRETGH-VVGGGSVLVESQKKRLFYTGDIKTN 166 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKNAKGC 227 +L + + I L+ +ST + ++ SE+ + + ++M KG Sbjct: 167 GSRMLRE-------ADLDVGDIDLLIIESTYSQTEQKPRKESERELIEFANEVMDR-KGV 218 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF------- 280 + + +FS S+ + I + KI++ G +LK + ++ ++F Sbjct: 219 LFIPSFSVERSQEMACILRSSNFKHKIIMDGMALKVNEIMFNHPNYLRDPKVFADAINEA 278 Query: 281 --LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPG 337 + D + E+ V+ + P L + + + + + + S G Sbjct: 279 VAVRDHEKRKHAIEEPCVVIS-----PAGMLVGGNATYYLQELSFNKNNGIALVSYQGEG 333 Query: 338 NEVAIGHIKN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHG 393 + + ++ +G + SGH N+L + I+ P+ ++ +HG Sbjct: 334 --TPGKKLLDTGKVSTRGKDLNVAAEVKQFEFSGHADRNELFEVVNKIKGNPK-VLTVHG 390 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + + ++ +++ + Sbjct: 391 DMESCKKFAQEIHEKFGLEAHAPDVNEVISI 421 >gi|284166659|ref|YP_003404938.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284016314|gb|ADB62265.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 429 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 64/434 (14%), Positives = 134/434 (30%), Gaps = 81/434 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LGG E+G + L +++D G+ V+ P Sbjct: 1 MELRF--LGGAREVGRSAILV-------NDALLLDFGMLTANPPQFPVETPTP------- 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASP----FAIGLLEAKRVYERVSKKI 118 A+ ++H H DH GA+ L S P++ +P + L + + Sbjct: 45 -----EAVVVSHGHLDHVGAVPSLLSGDARPPIHWTPPTYELTLTLARDTLNLHGGTMQC 99 Query: 119 PCISFQ------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P + + + H IP + +++ +++TGD+ Sbjct: 100 PFTETDVQRVTQVSQTHGYRETFEAAGHEVTFYNAGH-IPGSAHVLVDDGETRLLYTGDF 158 Query: 167 KLDDDAILGDVTDKDSLCAI-----GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +DD T S + + C+ST + E +++ + + Sbjct: 159 HVDDQRGDAADTTSPSGQRLVSGTTARPDADVVCCESTYSDVEH--DDRAVVEERFAESV 216 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + G V+V F+ + R + ++ + + + G KRV + +D Sbjct: 217 QTTLWEGGTVIVPAFA--IGRTQEMMLVCDAHDIPCYVDGMG-KRVTEMLRQYPDFVRDA 273 Query: 279 LFL------------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + ++ +I T A+ + ++ + Sbjct: 274 DAFRGAISHARFVTGRNGQRKRITDQKAAIITTSGMLSGGPAMTYI-----PEIRANPTN 328 Query: 327 TVIFSSRAIPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 + + + G E I R + +V D S H + + Sbjct: 329 KIAMTGYQVEGTPGRDLLETGSAEIDGRRMPISAQVEQYD------FSAHADRDGILEFL 382 Query: 381 QWIRPQVLVAIHGE 394 + R ++ HG+ Sbjct: 383 ESYRDGEVLINHGD 396 >gi|167042245|gb|ABZ06976.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW93J19] Length = 439 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 79/415 (19%), Positives = 148/415 (35%), Gaps = 46/415 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG GE+G + G+ +++D GV F K P I + + Sbjct: 18 VKIKVLGAAGEVGRS----GFLVNCDGTNLLLDYGVMFAKKRT------DPPIYPLHVKS 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIPC- 120 K++ A ITHAH DH G + L++ + VY + + L+E E+ Sbjct: 68 KDVDATIITHAHLDHSGCVPSLFNGGNTSVYCTSPTLDLSMLLIEDMLKIEKNKHSFHNG 127 Query: 121 ---------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + + V VG + E H I +++ + + +TGD Sbjct: 128 HVNSMLRNSKEIRFKEPVKVGNATFELRSSGHVI-GGSTVLVEANNKRLFYTGDINPKGS 186 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKNAKGCVL 229 +L + I L+ +ST + + SE G+ + ++M KG + Sbjct: 187 RMLPK-------ADLDIGDIDILITESTYSQTDQMPREESESGLIEFANEVMDR-KGTLF 238 Query: 230 VTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLF---LSDE 284 V +FS V R + I + + +V+ G +LK + +K ++F + D Sbjct: 239 VPSFS--VERSQEIACVLKNANFQHPVVMDGMALKVNDIMLRYPEYLKDMKIFADVIDDA 296 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSR--GEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 ++ I+ + + M+N+ +K+ + S G Sbjct: 297 VLIRDHGDRERAISEPCVVISPAGMLVGGNAVYYMQNLASDDKNGIAMVSYQAEGTPGKK 356 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 ++ +G + + SGH L M + I+ P+VL E Sbjct: 357 MLETGKISFRGKEMKVKAPVKQFEFSGHGDRTSLFDMIKNIKGDPKVLTVHGDEN 411 >gi|291233360|ref|XP_002736621.1| PREDICTED: cleavage and polyadenylation specific factor 3, 73kDa-like [Saccoglossus kowalevskii] Length = 715 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 66/475 (13%), Positives = 150/475 (31%), Gaps = 60/475 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L+ PLG E+G + + + K IM+DCG+ L G+D P I Sbjct: 15 ESDRLIIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPYFDLI 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL V+ + + I Sbjct: 67 E--PDEIDLLLISHFHLDHCGALPWFLQKTNFQGRVFMTHATKAIYRWLLSDYVKVSNIS 124 Query: 120 CISF--------QAGDKVDVGAFSIE--------SVRVNHSIPETMALVIRSPVGNIVHT 163 + D+++ F +E + +I +++T Sbjct: 125 TEQMLYTDNDLENSMDRIETIDFHVETEVLGVKFWCYNAGHVLGAAMFMIEIAGVKLLYT 184 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIYDIM 221 GD+ +D L + + L+ +ST E+ + ++DI+ Sbjct: 185 GDFSRQEDRHLMA-------AELPSVRPDVLIIESTYGTHIHEKREEREARFTGTVHDIV 237 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 C++ ++ R + ++ I ++ + SSL + I Sbjct: 238 NRGGRCLI---PVFALGRAQELLLILDEYWANHPELHDIPIYYASSLAKKCMSVYQTYIN 294 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 D++ + + + + + P + LSR + Sbjct: 295 AMNDKIKRQITISNPFVFKHISNLRGMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTD 354 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 ++ VI + + G + + + G ++ + + + S H + + Sbjct: 355 RRNGVIIAGYCVEGTLAKHILSQPEEVTTMSGQKLPLKMSVDYISFSAHADYQQISDFIR 414 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVV 436 + P ++ +HGE + K +++ ++ + E + Sbjct: 415 KLIPPHVILVHGEQNEMGRLKAAVVRDYEDSDIDLQVHNPKNTQAVELYFRGEKM 469 >gi|118088995|ref|XP_419942.2| PREDICTED: similar to Cleavage and Polyadenylation Specifity Factor protein [Gallus gallus] Length = 691 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 141/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 14 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 67 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 68 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 120 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 121 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 179 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 180 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 232 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 233 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 289 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 290 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 349 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 350 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 409 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 410 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 453 >gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata] gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata] Length = 819 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 86/565 (15%), Positives = 172/565 (30%), Gaps = 85/565 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG EIG + + + K IM DCG+ DD +PD + + K Sbjct: 8 LGAGQEIGKSCVVV----TINGKRIMFDCGMHMGCDDHN----RYPDFSLVSKSGDFDNA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER----------VS 115 + I ITH H DH GAL + P+Y S L R Sbjct: 60 ISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEDEL 119 Query: 116 KKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I+ + + I + H + + + + IV+TGD+ Sbjct: 120 FTTAHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH-VLGAVMVYAKVGDAAIVYTGDY 178 Query: 167 KLDDDAILGDVTDKDS-LCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN 223 + TD+ I + L+ +ST A R E+ + ++ + Sbjct: 179 NM--------TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAG 230 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSS-------LKRVVSVAIDVG 272 G L+ +F+ + R + + + + K+ + SS + + ++ Sbjct: 231 G-GKALIPSFA--LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQ 287 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTV 328 +K+ + F +I + L G ++ + + V Sbjct: 288 NVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLV 347 Query: 329 IFSSRAIPGNEVAIGH-----IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 ++ G + V V V S H + + +++ Sbjct: 348 ALPGYSVAGTVGHKLMSGKPTTVDLYNGTKVDVR--CKIHQVAFSPHTDAKGIMDLTKFL 405 Query: 384 RPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ +V +HGE P ++ ++ + I C P + I+ + Sbjct: 406 SPKNVVLVHGEKPSMMILKDKITSELDIPCFVPANGETVSVASTTYIKANASDMFLKS-C 464 Query: 443 DGFLIGKFADLGIAKRRQLSFVGHLS--------------VNVLLDNHYNIFGVPEIVDI 488 + Q + G L V+ +L ++ + + Sbjct: 465 SSPNFKFSNSTQLRVTDQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKNHVVSLAYCCPV 524 Query: 489 GIPAYDGDGGKIHKLLLKTVITTVV 513 + + + K L + ++ TV Sbjct: 525 KVKGESDNDADLIKQLSEKILKTVS 549 >gi|229585253|ref|YP_002843755.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|228020303|gb|ACP55710.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] Length = 519 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 148/432 (34%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 105 LGGGREVGRSAIEVG----NSDGSIILDYGVNFDEKDN-------PNFP-LQEVPNRVKG 152 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQ- 124 ++HAH DH GAL L+ VY + +L+ + + Sbjct: 153 FVVSHAHLDHVGALPIYQIGSLNTKVYGTVATRIITEVMLKDFLKLSGSKIPYEWVEVRK 212 Query: 125 ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G+++++ + + H IP + + + S G + TGD L + ++ Sbjct: 213 TMDNFMAIGYGEEMEIDSMKVSLYNAGH-IPGSSIIKVSSEKGAVAFTGDINLTETKLMK 271 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + +IGN +L + E + + ++++ + G VLV FS Sbjct: 272 ----PAEIESIGNANVLVMESTYGKFNHPNRKDVENEFYEKVLEVVE-SGGTVLVPAFS- 325 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + K L Y + Sbjct: 326 -LARSQEVLSVLAERDFPYPVYYDGMSREITEIMLGFREFLNKPDLLKKAYDNFNYVKGW 384 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + + K+ + S + Sbjct: 385 EDRHRAWKERGVIVASAGMLKGGPAVYYFKKLSESSKNAIFLVSYQAIN--TPGRRLLEM 442 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + S H L + + I+ + +V +HG P + + +L Q Sbjct: 443 GKFDEYSGLLRARLEIFDFSSHAGRRQLLEIVKSIKGLEKVVLVHGSPDNETSLADLIKQ 502 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 503 ETGVEVIIPENG 514 >gi|158302375|ref|XP_321933.4| AGAP001224-PA [Anopheles gambiae str. PEST] gi|157012921|gb|EAA01794.4| AGAP001224-PA [Anopheles gambiae str. PEST] Length = 588 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 68/458 (14%), Positives = 137/458 (29%), Gaps = 70/458 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ +V PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 1 SDLMVIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLID 52 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI-- 118 + +FI+H H DH GAL + + + I Sbjct: 53 --ADQIDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKVSNIST 110 Query: 119 ---------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + ++ D+ + H + +I +++T Sbjct: 111 DQMLYTEADLEASMEKIETINFHEERDILGVRFWAYNAGH-VLGAAMFMIEIAGIRVLYT 169 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMK 222 GD+ +D L I L+ +ST ++ + ++ + Sbjct: 170 GDFSRQEDRHLMA-------AEIPAMRPDVLITESTYGTHIHEKREDRENRFTSLVQKIV 222 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA------- 268 G L+ F+ + R + ++ I ++ + SSL + Sbjct: 223 QQGGRCLIPVFA--LGRAQELLLILDEYWSQNPDLQEIPIYYASSLAKKCMAVYQTYINA 280 Query: 269 ------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 + I G+ + + P + LSR + Sbjct: 281 MNDKIRRQIAINNPFVFRFISNLKGIDHFDDVGPCVV--MASPGMMQSGLSRELFESWCT 338 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ VI + + G + G ++ + + S H Sbjct: 339 DPKNGVIIAGYCVEG---TLAKTILFEPEEITSMNGQKLPLNMSVDYISFSAHTDYQQTS 395 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + ++P +V +HGE + K ++E A Sbjct: 396 EFIRLLQPTHVVLVHGEQNEMGRLKSALMREYEANPKV 433 >gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] Length = 963 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 75/454 (16%), Positives = 148/454 (32%), Gaps = 67/454 (14%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG E+G + + + K IM DCG+ DD +PD + I K Sbjct: 8 LGAGQEVGKSCVVV----TINGKRIMFDCGMHMGYDDH----RRYPDFSLISKSGDFDSA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV-----SKKIPC 120 L + ITH H DH GAL + PVY + L R + Sbjct: 60 LHCVIITHFHLDHVGALPYFTEVCGYNGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQ 119 Query: 121 ISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWK 167 + + +++ + + + +V+TGD+ Sbjct: 120 FTADHIKQCLNKVIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYN 179 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAK 225 + D LG I + L+ +ST A R+ E+ K ++ + Sbjct: 180 MTPDRHLGA-------AQIDRLQLDLLITESTYATTIRDSKYAREREFLKVVHKCVAGG- 231 Query: 226 GCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLL---GSSLKRVVSVAIDVGIIKKDQ 278 G VL+ TF+ + R + + D E++ K+ + G +++ + + +G + Sbjct: 232 GKVLIPTFA--LGRAQELCLLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIG-WTSQK 288 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTVI 329 + + S + + + P + + G + E + V Sbjct: 289 IKETYTSRNAFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPCEMNLVT 348 Query: 330 FSSRAIPGNEVAIGHI-----KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + G N + + V + + + S H + + +++ Sbjct: 349 LPGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQ--LSFSPHTDAKGIMDLVKFLS 406 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 P+ ++ +HGE + + KE E N Sbjct: 407 PKHVILVHGEKPKMASLKERIQSELEIQCYVPAN 440 >gi|15678932|ref|NP_276049.1| hypothetical protein MTH912 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622008|gb|AAB85410.1| unknown [Methanothermobacter thermautotrophicus str. Delta H] Length = 521 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 80/479 (16%), Positives = 154/479 (32%), Gaps = 112/479 (23%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----------GV-DLV----- 54 GGV EIG N + I +D G F ++L G+ DL+ Sbjct: 37 GGVDEIGGN----RIEVSCNGDGIFLDFGKRFNIENLYFDEFLQPRSFSGIADLIELEAL 92 Query: 55 --FPD------ITFIMKERKN---LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 P + ++ ++ + I ++H H DH G L + +P Y + + Sbjct: 93 PWIPGLYREDQVRYLGMRFEDEPAVSGILLSHPHLDHAGCLKYI--RHDIPFYMTEESFL 150 Query: 104 LLEA-------------------------------KRVYERVSKKIPCISFQAGDKVDVG 132 +L+A + + + P + D+G Sbjct: 151 ILKAIEDTSTLSSDLLHYKPKFHFKEKKRKTGNTSHMRDKNIKIERPIKLLEPYKAEDLG 210 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F I V+HS+P + A +I S IV+TGD + + + + Sbjct: 211 EFEITQAPVDHSVPGSCAYLIESEEA-IVYTGDIRF-RGRRDQESRKFVKKARKFSPTV- 267 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 ++ + T ++ E+ I++ DI N +G V++ + R + AE R Sbjct: 268 -MITEGTRIDQDN-STFEEDIERRTSDIAVNHRGLVIINYPIRDLDRFLTFYRAAENSDR 325 Query: 253 KIVLLGSSLKRVVSVAIDVGI--IKKDQLFLSDESFGLYPRE------------------ 292 + + ++ + +G ++ +++ ++GL + Sbjct: 326 TLAVSLKQAY-IIKLFEGLGYPWLRDLAVYIPRRNWGLIAEDAFVCFDGEWIPAADLPEE 384 Query: 293 ----------------QLIVIATGSQGEPRSALAQLSRGEMR-NVKLAEKDTVIFSSRAI 335 + + EP L Q E + + + + S+ Sbjct: 385 YMEQDYRGWERAFLELDNTITCRDLREEPEEYLFQCDYFEFKEFIDIKPEGAAYIKSKTE 444 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAEC-PVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 P NE + E + H SGH +DL M + I P+ + IH Sbjct: 445 PFNEEME---IDAERESNWLRHFGIYQYRRFHSSGHAGRSDLLGMIRDIEPESIYPIHT 500 >gi|15922516|ref|NP_378185.1| cleavage and polyadenylation specificity factor small subunit [Sulfolobus tokodaii str. 7] gi|15623306|dbj|BAB67294.1| 422aa long hypothetical cleavage and polyadenylation specificity factor small subunit [Sulfolobus tokodaii str. 7] Length = 422 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 128/398 (32%), Gaps = 49/398 (12%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G +S + I++D GV+F +D P P + + + Sbjct: 8 LGGGKEVGR----AAIEVTTSSESIILDYGVNFDANDNPN----LP----LQEVPSRVKG 55 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAI----GLLEAKRVYERVSKKIPCIS---- 122 ++H+H DH GAL + P++ + +L+ Sbjct: 56 FIVSHSHLDHVGALPLYQISGNFPIFGTRLTRLITELMLKDFLKLSGAKVPFEWTEVRKV 115 Query: 123 ------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + ++ +VG F E H IP + + I++ GNIV+TGD + + ++ Sbjct: 116 MDNFRSVKYHEEFEVGTFKTELGDAGH-IPGSSMIKIKTEKGNIVYTGDTNVINTHLVK- 173 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 L + + +L + + E +++ ++++ G VLV FS Sbjct: 174 ---PAELEFLRDANVLIIESTYGRFNHPERKVVEDEFFESVKEVVEGG-GTVLVPAFS-- 227 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 +SR + I+ + + + + ++ ++ F++D Sbjct: 228 LSRSQEILSVLSSKNFDYPVYYDGMVK-----EITELMIQNPEFINDYESLKKAYNYFKY 282 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN----------EVAIGHIK 346 + + + + +K P N + Sbjct: 283 VNGWNDRNKATRNEGVIVSSAGMLKGGPAVYYFKKIADNPKNAVFLVSYQAENTPGRRLL 342 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + + S H N LK M + + Sbjct: 343 ETGKFDEYSPMLKARFQIFDFSSHAGKNQLKDMIKSAK 380 >gi|62898706|dbj|BAD97207.1| cleavage and polyadenylation specific factor 3, 73kDa variant [Homo sapiens] Length = 684 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 62/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KIPCISFQAGDKV-----------------DVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + V +V H + +I Sbjct: 115 NISADDMLYTETVLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|332639108|ref|ZP_08417971.1| putative hydrolase [Weissella cibaria KACC 11862] Length = 398 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 73/410 (17%), Positives = 130/410 (31%), Gaps = 51/410 (12%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLP------GVDLVFPD-IT 59 L GV IG N+ + + +++D G++F P D P G+ PD T Sbjct: 5 VTVLNGVDTIGGNVVAFE----TQTARVIMDFGINFAPADSQPDDLLSNGILPALPDLFT 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVS 115 I AIFI+H H DH GAL L PVY + L+ + Sbjct: 61 DIA--GDKQTAIFISHLHLDHMGALKYLTKLT--PVYMTMESATLYAELIRQGLES---A 113 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 V +G ++ + +H I + + VH+GD + D Sbjct: 114 PNAQVQVIAPNKDVQIGDLTVRAFATDHDIMGAVMFEVTDGQHRFVHSGDVRYDG-WHPE 172 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTT 232 VT + + T + ++ + + NA V++ Sbjct: 173 RVTAWT--QYLHEHRPDLFFIEGTEFSFDDDTSRQRRTEATVLTDFTNAMASDELVVINP 230 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 + +V R+ + A Q+ RK+V + ++ I+ + ++D Sbjct: 231 YERNVERLMKLSAAARQVNRKLVWDERFAGILRAMGASNEIMLGRDVTVADMQ------- 283 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 Q R L + + + + + L ++ Sbjct: 284 ---------QQPGRYVLQNHFDNLHLLDAFDTFSYLHMNGEPLGDYDPRYADLTAYLAQR 334 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 GV + SGH P+DL R+ + ++ V H A Sbjct: 335 GVALQLAG------ASGHATPDDLLRIAVEVDAKMTVPWHSFHPEREAEA 378 >gi|57641363|ref|YP_183841.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus kodakarensis KOD1] gi|57159687|dbj|BAD85617.1| cleavage and polyadenylation specficity factor subunit homolog [Thermococcus kodakarensis KOD1] Length = 648 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 83/478 (17%), Positives = 157/478 (32%), Gaps = 86/478 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D GV+ P P D P Sbjct: 182 KSRWIRITGLGGFREVGRSALLV----QTDESYVLVDFGVNIAALKDPTKAYPHFDA--P 235 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---- 110 + +++ E L AI ITHAH DH G L L+ + P+Y +P L+ + Sbjct: 236 EFRYVLDEGL-LDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIE 294 Query: 111 -------YERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMAL-VIRS 155 K + +D G + H + ++ I + Sbjct: 295 IQHMNGVEPLYRPKDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSSIVHLHIGN 354 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K + + L+ +ST + + +K Sbjct: 355 GLHNIAITGDFKFIPTRLFEPA--VSRFPRL-----ETLVMESTYGGSNDYQMPREEAEK 407 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLKRVVSVA 268 + +++ G VL+ + V R + I+ + E+ G ++ + L ++ A Sbjct: 408 RLIEVIHQTLKRGGKVLIPAMA--VGRAQEIMMVLEEYARVGGIEVPIY---LDGMIWEA 462 Query: 269 IDVGIIKKDQLFLSDESFGLYP----------------REQLIVIATGSQGEPRSALAQL 312 + + L + RE+ +I +G + L Sbjct: 463 TAIHTAYPEYLSKHIREQIFHEGYNPFLNPIFKSVANSRERQDIIDSGEPAIIIATSGML 522 Query: 313 SRG----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 G + + K+++IF S G + + G E + V Sbjct: 523 VGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQRGLREIPIVGEDGRTEVINVNMEV 582 Query: 368 ------SGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGE HK+ + Sbjct: 583 HTIDGFSGHADRRELMSYVARVRPRPERIITVHGEAHKCLDLSSSIHKKFGISTRAPN 640 >gi|126303222|ref|XP_001371997.1| PREDICTED: similar to Cleavage and Polyadenylation Specifity Factor protein [Monodelphis domestica] Length = 684 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|15920543|ref|NP_376212.1| cleavage and polyadenylation specificity factor large subunit [Sulfolobus tokodaii str. 7] gi|15621326|dbj|BAB65321.1| 637aa long hypothetical cleavage and polyadenylation specificity factor large subunit [Sulfolobus tokodaii str. 7] Length = 637 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 73/459 (15%), Positives = 153/459 (33%), Gaps = 69/459 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LGG E+G + L + +++D G++ + + +FP + Sbjct: 175 KDRNVRITALGGFQEVGRSAVLVE----TPESKVLLDVGLN---PSVSYGEKLFPKLDID 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 +++ A+ ITHAH DH G + L+ + + PVY + ++ + Sbjct: 228 QVRLEDIDAVVITHAHLDHCGMVPLLFKYGYNGPVYTTAPTRDIMALMQLDALDVAEKEG 287 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ + D+ + H + MA I NIV Sbjct: 288 RPLPYTAKEVRKELLHTITLDYEEVTDIAPDIKLTFYNAGHILGSAMAHLHIGDGTHNIV 347 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI-------- 213 +TGD+K +L D+ + ++ ++T E E Sbjct: 348 YTGDFKYARTKLLDKANDE-------FPRVDTIIMETTYGDHEQENREEAEAKLIEIINR 400 Query: 214 -----KKNIYDIMKNAKGCVLVTTFSSSVSR----------IRSIIDIAEQIGRKIVLLG 258 + + ++ +G ++ + ++ + + +I +L Sbjct: 401 TISRGGRVLIPVLAVGRGQEIMLVLNDAMKKKLIPEVPIYVTGLVEEITAIHNAYPEMLS 460 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT------GSQGEPRSALAQL 312 ++ + + + + + + E I++AT G E +A Sbjct: 461 REVREAILYKDENPFMSEFFHRIEGYREDIAQGEPSIILATSGMLNGGPAVEFFKTMAPD 520 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 SR + V + T+ + G I +R I + SGH Sbjct: 521 SRNSIIFVSYQAEGTLG--RKVSDG--AQEIQIIDRDGRIENIQIKMEVTRVEGFSGHSD 576 Query: 373 PNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEG 409 L + ++P+ L+ HGEP + + + L +E Sbjct: 577 RRQLLNFLKNLNVKPKNLLLNHGEPGSIESFRRLVEREK 615 >gi|71795627|ref|NP_001025201.1| cleavage and polyadenylation specificity factor subunit 3 [Rattus norvegicus] gi|71121802|gb|AAH99817.1| Cleavage and polyadenylation specificity factor 3 [Rattus norvegicus] Length = 685 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGMK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|156937397|ref|YP_001435193.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566381|gb|ABU81786.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 428 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 148/439 (33%), Gaps = 51/439 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 LGG E+G Y + +++D GVSF ++D P VFP+ K+ Sbjct: 5 ITFLGGAREVGR----AAYWVKDGKASLLLDYGVSFDEEDRP----VFPEY----VSPKD 52 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIPCISF 123 + A+ ++HAH DH GAL L+S + P Y + L+ Sbjct: 53 VGAVVLSHAHLDHSGALPMLYSAIRRPAYMTKLTKELTAILINDFLKLSGYYATYGETEV 112 Query: 124 QAG-------------DKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 + + + G + H IP + + + P +++TGD +L Sbjct: 113 KEFLESVRTVDYRRTVEIPEAGGTLLTFYDAGH-IPGSAMVKLELPSGLKLLYTGDVRLS 171 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + +LG D L A L+ ++T + E + D+ + +G Sbjct: 172 ETQLLG-GADVSGLEA------DVLIIEATYGKSDHP-PRENVEALFVSDVREVLQGGGT 223 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG----IIKKDQLFLSDES 285 V + V R + I+ + + + + R V+ + G +K + Sbjct: 224 VLVPAFGVGRGQEILAVLADHEVEGDVYLDGMVRNVTELLIQGENKKFLKNPDMLEKAYE 283 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEV 340 R + A A + RG R ++ KD + S PG Sbjct: 284 EAKVVRGWQDRRRVWKRNGVIIASAGMLRGGPSLYYARKIQGIPKDAIFLVSFQAPG--T 341 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLV 399 + V + E S H ++L + + + + + ++ +H E + Sbjct: 342 PGRRLVEEGVIEEGGPRVEARTQWFDFSSHAGASELLEIIKSVNKLKKVIIVHSEESTAL 401 Query: 400 AHKELALQEGIACVPPVRN 418 + +E V + Sbjct: 402 HFAQRVREETGLDVIVPKP 420 >gi|300676780|gb|ADK26656.1| cleavage and polyadenylation specific factor 3, 73kDa [Zonotrichia albicollis] Length = 721 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 45 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 98 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 99 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 151 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 152 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 210 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 211 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 263 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 264 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 320 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 321 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 380 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 381 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 440 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 441 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 484 >gi|309366062|emb|CAP21913.2| hypothetical protein CBG_00745 [Caenorhabditis briggsae AF16] Length = 652 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 64/475 (13%), Positives = 146/475 (30%), Gaps = 77/475 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG ++G + L G+ + IM+DCG+ D D FPD +++ K+ Sbjct: 34 IKIVPLGAGQDVGRSCILITIGTKN----IMVDCGMHMGYQD----DRRFPDFSYVFKKI 85 Query: 66 ------------------KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL 105 L + I+H H DH G+L + P+Y + + Sbjct: 86 FLEKTFFFSYIGGGGRLTDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAIC 145 Query: 106 EAKRVYER-----VSKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPE 147 R + + + + + Sbjct: 146 PVLLEDYRKVQCDIKGETNFFTSDDIKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLG 205 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REG 205 IR ++++TGD+ + D + + L+ +ST A R+ Sbjct: 206 AAMFEIRVGDHSVLYTGDYNMTPDRH------LGAARVLPGVRPTILISESTYATTIRDS 259 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGS 259 E+ + +++ + G V++ F+ + R + + + E I Sbjct: 260 KRARERDFLRKVHETVMKG-GKVIIPVFA--LGRAQELCILLESYWERMALNVPIYFSQG 316 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE--- 316 +R + + + ++ + + + G + +P + + G Sbjct: 317 LAERANQYYRLFISWTNENIKKTFVERNMFEFKHIRPMEKGCEDQPGPQVLFSTPGMLHG 376 Query: 317 ------MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHV 367 + + +I + G + N + + + + Sbjct: 377 GQSLKVFKKWCSDPLNMIIMPGYCVAG--TVGARVINGEKRIEIDGKVHEIKLGVEYMSF 434 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 S H + ++ + P+ ++ +HGE + K +E V NG+ Sbjct: 435 SAHADAKGIMQLIRQCEPKHVMFVHGEAEKMEFLKGKVEKEYDIPVHMPANGETC 489 >gi|148702078|gb|EDL34025.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b [Mus musculus] Length = 701 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 140/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 25 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 78 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 79 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 131 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 132 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 191 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 243 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 244 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 300 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 301 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 360 Query: 320 VKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G I + + + + + + S H Sbjct: 361 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 420 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 421 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 464 >gi|7706427|ref|NP_057291.1| cleavage and polyadenylation specificity factor subunit 3 [Homo sapiens] gi|18203503|sp|Q9UKF6|CPSF3_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73 gi|6002955|gb|AAF00224.1|AF171877_1 cleavage and polyadenylation specificity factor 73 kDa subunit [Homo sapiens] gi|18044212|gb|AAH20211.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo sapiens] gi|62822309|gb|AAY14858.1| unknown [Homo sapiens] gi|119621394|gb|EAX00989.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform CRA_a [Homo sapiens] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis thaliana] Length = 837 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 75/450 (16%), Positives = 145/450 (32%), Gaps = 70/450 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG EIG + + + K IM DCG+ DD +P+ + I K Sbjct: 8 LGAGQEIGKSCVVV----TINGKKIMFDCGMHMGCDDHN----RYPNFSLISKSGDFDNA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER----------VS 115 + I ITH H DH GAL + P+Y S L R Sbjct: 60 ISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEEL 119 Query: 116 KKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I+ + + I + H + + + + IV+TGD+ Sbjct: 120 FTTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH-VLGAVMVYAKMGDAAIVYTGDY 178 Query: 167 KLDDDAILGDVTDKDS-LCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN 223 + TD+ I + L+ +ST A R E+ + ++ + Sbjct: 179 NM--------TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAG 230 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSS-------LKRVVSVAIDVG 272 G L+ +F+ + R + + + + K+ + SS + + ++ Sbjct: 231 G-GKALIPSFA--LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQ 287 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTV 328 +K+ + F +I + L G ++ + + V Sbjct: 288 NVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLV 347 Query: 329 IFSSRAIPGNEVAIGH-----IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 ++ G + V V V S H + + +++ Sbjct: 348 ALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVR--CKVHQVAFSPHTDAKGIMDLTKFL 405 Query: 384 RPQVLVAIHGE-PLHLVAHKELALQEGIAC 412 P+ +V +HGE P ++ +++ + I C Sbjct: 406 SPKNVVLVHGEKPSMMILKEKITSELDIPC 435 >gi|114576008|ref|XP_001154609.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3 isoform 6 [Pan troglodytes] gi|114576010|ref|XP_001154730.1| PREDICTED: hypothetical protein isoform 8 [Pan troglodytes] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|73979708|ref|XP_540075.2| PREDICTED: similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit) isoform 1 [Canis familiaris] gi|194220982|ref|XP_001502516.2| PREDICTED: similar to Cleavage and Polyadenylation Specifity Factor protein [Equus caballus] gi|301775721|ref|XP_002923277.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3-like [Ailuropoda melanoleuca] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|156552097|ref|XP_001605081.1| PREDICTED: similar to cleavage and polyadenylation specificity factor [Nasonia vitripennis] Length = 688 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 63/462 (13%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + I Sbjct: 18 ESDLLSIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGLDA-LPFVDII 69 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV--------- 110 + + I+H H DH GAL + + + + Sbjct: 70 E--ADEIDLLLISHFHLDHCGALPWFLQKTNFKGRCFMTHATKAIYRWLLSDYIKVSNIA 127 Query: 111 -------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + I ++ DV + H + +I I++ Sbjct: 128 TEQMLYTEADLESSMDKIETINFHEEKDVYGIKFWAYNAGH-VLGAAMFMIEIAGVKILY 186 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L I N L+ +ST ++ + + + Sbjct: 187 TGDFSRQEDRHLMA-------AEIPNVHPDVLITESTYGTHIHEKREDRE-GRFTNLVHE 238 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 ++ R + ++ I ++ + SSL + + Sbjct: 239 IVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNA 298 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + + P + LSR + Sbjct: 299 MNDKIRRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDA 358 Query: 325 KDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI + + G + G ++ + + + S H Sbjct: 359 KNGVIIAGYCVEG---TLAKTILSEPEEITTMSGQKLSLKMSVDYISFSAHTDYQQTSEF 415 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 416 IRILKPPHVILVHGEQNEMSRLKAALQREYEDDPSTAMEIHN 457 >gi|149050991|gb|EDM03164.1| cleavage and polyadenylation specificity factor 3, isoform CRA_a [Rattus norvegicus] Length = 685 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|257386449|ref|YP_003176222.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257168756|gb|ACV46515.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 411 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 131/417 (31%), Gaps = 72/417 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG EIG + L +++D G++ V V PD A Sbjct: 6 LGGADEIGRSAVLI-------DGSLLLDYGMASESPPQYPVGDVDPD------------A 46 Query: 71 IFITHAHEDHYGALHDLWSFLHVP-VYASPFAIG----LLEAKRVYERVSKKIPCISFQ- 124 + ++H H DH GA+ L S P V+ +P L E S + P Sbjct: 47 VVVSHGHLDHVGAVPALLSGTEQPTVHWTPPTRELALTLAEDTLKLHGGSPRCPFTENDV 106 Query: 125 -----------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + + + H IP + +++ +++TGD+ DD + Sbjct: 107 RRIGEVSATHGYREPFEAAGYEVTFYNAGH-IPGSAHVLVSDGETRLLYTGDFHTDDQRL 165 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLV 230 + +D+ + A++C+ST + ++ + + ++ G V+V Sbjct: 166 VSATSDRPA--------ADAVICESTYSDVSHEDRG--DVEASFVETLRTTVWQGGTVVV 215 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--------- 281 F+ + R + I+ + G + G +RV +D Sbjct: 216 PAFA--IGRTQEIMLVCAAHGIDCYVDGMG-QRVTEQLRHHPAFLRDADAFRGAVSNARF 272 Query: 282 ---SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG- 337 D + +V+ T A+ + R V Sbjct: 273 VDGRDGQRRRIADQNAVVVTTSGMLSGGPAMTYVPAIADRPVNTIAMTGYQVEGTPGRDL 332 Query: 338 NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 E I R++ +V A D S H L R L+ HG+ Sbjct: 333 LETGSAEIDGRVMPVSAQVEAYD------FSAHADREGLLSFLDAYRDSRLLINHGD 383 >gi|291412514|ref|XP_002722528.1| PREDICTED: cleavage and polyadenylation specific factor 3, 73kDa [Oryctolagus cuniculus] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G + + + G ++ + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|308807807|ref|XP_003081214.1| mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) (ISS) [Ostreococcus tauri] gi|116059676|emb|CAL55383.1| mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) (ISS) [Ostreococcus tauri] Length = 572 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 74/508 (14%), Positives = 163/508 (32%), Gaps = 62/508 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E L +PLG E+G + + + K +M DCG+ PG + ++ Sbjct: 14 EMLEIIPLGAGSEVGRSCVVATF----RGKTLMFDCGI------HPGFSG-IASLPYLDD 62 Query: 64 -ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEA------KRVYERV 114 + + A+ +TH H DH A+ L ++ + + + + + Sbjct: 63 VDLSAVDALLVTHFHLDHCAAVPFLVGRTDFRGRIFMTHPTKAIYHMLMQDFVRLMKQGG 122 Query: 115 SKKIPCI------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 ++ ++DV + R H + + +++ Sbjct: 123 GEEPLFTDADLEASMKRIEVVDFHQEIDVDGVKVTPYRAGH-VLGACMFNVDIGGLRVLY 181 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ D L I ++ +ST + + E+ I+ + Sbjct: 182 TGDYSRIADRHLPA-------ADIPAIPPHVVIVESTYGVSPHSPREEREIRXXXXXXXR 234 Query: 223 NAKGCVL---VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 + ++ + + R+ I A + RK + + + V++ + + + Sbjct: 235 AQELLLILEDFWAQNPDLQRV--PIYQASTLARKAMTIYQTYINVLNADMKAAFEEANPF 292 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN- 338 + E V P + LSR + K+ VI + A+ G Sbjct: 293 VFNHVKHISKASELDDVGPCVVLATPSMLQSGLSRELFESWCEEPKNGVIIADFAVQGTL 352 Query: 339 EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 I N++ + + + + + S H + + P +V +HGE Sbjct: 353 AREILSDVNKVTARDGQELQLNMSVDAISFSAHADYPQTQAFLDTLAPPHVVLVHGEAGE 412 Query: 398 LVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 + L+ + + +M P + + + G + + IA+ Sbjct: 413 MGR-----LKRALDAKAAADDKQMSVYTPKNCQAVQIIHKGERIAKLTGL-------IAE 460 Query: 458 RRQLSFVGHLSVNVLLDNH-YNIFGVPE 484 R G + VL++ ++ PE Sbjct: 461 REV--EEGDVVAGVLVEKDFGHMLIAPE 486 >gi|296224527|ref|XP_002758090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3 [Callithrix jacchus] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|332247248|ref|XP_003272765.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3 [Nomascus leucogenys] gi|67969340|dbj|BAE01022.1| unnamed protein product [Macaca fascicularis] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|27805863|ref|NP_776709.1| cleavage and polyadenylation specificity factor subunit 3 [Bos taurus] gi|18202362|sp|P79101|CPSF3_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73 gi|1707412|emb|CAA65151.1| Cleavage and Polyadenylation Specifity Factor protein [Bos taurus] gi|75773721|gb|AAI04554.1| Cleavage and polyadenylation specific factor 3, 73kDa [Bos taurus] gi|296482248|gb|DAA24363.1| cleavage and polyadenylation specificity factor subunit 3 [Bos taurus] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G + + + G ++ + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|240975718|ref|XP_002402161.1| cleavage and polyadenylation specificity factor, putative [Ixodes scapularis] gi|215491113|gb|EEC00754.1| cleavage and polyadenylation specificity factor, putative [Ixodes scapularis] Length = 694 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 139/440 (31%), Gaps = 66/440 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L+ PLG E+G + + + K IM+DCG+ + G+D P + I Sbjct: 21 ESDLLLIRPLGAGQEVGRSCIILEF----KGKRIMLDCGI---HPGMSGLDA-LPYVDLI 72 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + + ++H H DH GAL + + + I Sbjct: 73 E--ADEIDLLLVSHFHLDHCGALPWFLQKTTFKGRCFMTHATKAIYRWLLADYIKVSNIG 130 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + ++ +V H + +I +++ Sbjct: 131 TEQMLYSETDLEASMEKIETINFHEEKEVNGIRFWCYNAGH-VLGAAMFMIEIAGVKVLY 189 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I N L+ +ST E+ + + + Sbjct: 190 TGDFSRQEDRHLMA-------AEIPNIHPDVLIIESTYGTHIHEKREEREARFTGLVHDI 242 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRV-VSVAIDVGI 273 N G L+ F+ + R + ++ I ++ + SSL + ++V Sbjct: 243 VNRGGRCLIPVFA--LGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVYQTYVN 300 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLA 323 +++ + + + + + E P + LSR + Sbjct: 301 AMNERIRRQITINNPFVFKHISNLKSIEHFEDVGPCVVMASPGMMQSGLSRELFESWCTD 360 Query: 324 EKDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+ VI + + G + G ++ + + + S H Sbjct: 361 PKNGVIIAGYCVEG---TLAKTILSEPEEISTMVGQKLPLKMSVDYISFSAHTDYQQTSE 417 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 + ++P +V +HGE + Sbjct: 418 FIRTLKPPHIVLVHGEQNEM 437 >gi|317133312|ref|YP_004092626.1| putative hydrolase [Ethanoligenens harbinense YUAN-3] gi|315471291|gb|ADU27895.1| putative hydrolase [Ethanoligenens harbinense YUAN-3] Length = 457 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 66/442 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV---------DL 53 E+ GG+ IG + +G I+ D G+ + G+ + Sbjct: 2 QEKTRIRFWGGLSTIGGTIVSLEHGDFR----IVFDFGII--ETKTSGILRYGIHMKSEQ 55 Query: 54 VFPDITFIMK--------ERKNLMA-------------IFITHAHEDHYGALHDLWSFLH 92 + D + + +++ + ITH H DH GAL L Sbjct: 56 IVRDFLTLRRLKPISGLYRAEDIEGLPLRPAEADGKTAVCITHLHIDHMGALSLLSP--S 113 Query: 93 VPVYASPFAIGLLEA-KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 VPV+ S + L EA V + + V G F+++ + V+H +P AL Sbjct: 114 VPVFLSEPSRTLYEALHFVEDGTEWNPQIQAVDTTKPVAWGPFTVKFLEVDHDVPGACAL 173 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDST----------- 199 I +P +++TGD +L + GI + + T Sbjct: 174 HIAAPDVRLLYTGDVRLHGRHPEK----TRRMAETARTLGIDVALVEGTALRGREETPLP 229 Query: 200 ---NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 ++ I+E G+++ + ++ AKG V++ + +V RI + +D A + GR +VL Sbjct: 230 IKADSKLPPDVITEDGVRERMAALIARAKGLVVINLYPRNVERIDAAMDAAIRNGRTLVL 289 Query: 257 LGSS--LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + + + A + +S + + V + Sbjct: 290 DPRTAFVAEKMGCARRFRVFSGGHQTMSPDVLQN-AWHWIDVDEINHDPHLFALQNTYQN 348 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 I + G V P++ SGH +P Sbjct: 349 SLDLLRFRLHDGLYIHTGGTPLGIYDPRDPSFRDFVSFL-----GIDTVPIYCSGHAFPK 403 Query: 375 DLKRMYQWIRPQVLVAIHGEPL 396 +LK + + + V + +H Sbjct: 404 NLKYLAERLNATVTIPLHSLHP 425 >gi|18203388|sp|Q9QXK7|CPSF3_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; Short=mRNA 3'-end-processing endonuclease CPSF-73 gi|6625904|gb|AAF19420.1|AF203969_1 cleavage and polyadenylation specificity factor 73 kDa subunit [Mus musculus] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFWHTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|31980904|ref|NP_061283.2| cleavage and polyadenylation specificity factor subunit 3 [Mus musculus] gi|23271024|gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus] Length = 684 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|74221128|dbj|BAE42066.1| unnamed protein product [Mus musculus] Length = 684 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEKNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|74178650|dbj|BAE33998.1| unnamed protein product [Mus musculus] Length = 684 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLRAALIREYEDNDEVHIEVHN 447 >gi|15679214|ref|NP_276331.1| cleavage and polyadenylation specificity factor [Methanothermobacter thermautotrophicus str. Delta H] gi|2622312|gb|AAB85692.1| cleavage and polyadenylation specificity factor [Methanothermobacter thermautotrophicus str. Delta H] Length = 636 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 81/452 (17%), Positives = 153/452 (33%), Gaps = 79/452 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITF 60 N+ +GG E+G + + +++DCGV+ D L P+ T Sbjct: 177 NDWARLTAMGGFREVGRSCLYL----QTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFT- 231 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRV 110 +L A+ ITHAH DH G L L+ + PVY + L+ A R Sbjct: 232 ----LDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHRE 287 Query: 111 YERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNI 160 E + + + + + + H + MA I N+ Sbjct: 288 DEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHIGDGQHNM 347 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+TGD+K + +L + I L+ +ST E S +K + Sbjct: 348 VYTGDFKYEQSRLLEAAAN--RFPRI-----ETLVMESTYGGHEDVQPSRNRAEKELVKT 400 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 + + G +L+ F+ V R + ++ + E+ + + G + Sbjct: 401 IYSTLRRGGKILIPVFA--VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWEANAIHTAR 458 Query: 271 VGIIKKD----------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---- 316 + KD F+SD + ++ I G S L+ G Sbjct: 459 PEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEY 518 Query: 317 MRNVKLAEKDTVIFSSRAIPGN----------EVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + + ++++F G+ E+ + +++ VR+ + E Sbjct: 519 FKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEG--- 575 Query: 367 VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 SGH L + I +P+ ++ HG+ Sbjct: 576 FSGHSDRRQLMEYVKRISPKPEKILLCHGDNY 607 >gi|67969643|dbj|BAE01170.1| unnamed protein product [Macaca fascicularis] Length = 684 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 135/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|11498093|ref|NP_069318.1| mRNA 3'-end processing factor, putative [Archaeoglobus fulgidus DSM 4304] gi|2650146|gb|AAB90756.1| mRNA 3'-end processing factor, putative [Archaeoglobus fulgidus DSM 4304] Length = 632 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 45/275 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDIT 59 + + + LGG E+G + L + I+IDCGV+ P L P++ Sbjct: 173 IDEKWVRVTFLGGSREVGRSCYLL----QTPESRILIDCGVNVSNLSSTPY--LYVPEVQ 226 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRV 110 + L A+ ITHAH DH G + L+ F P+Y +P L LE Sbjct: 227 PL----DALDAVVITHAHLDHCGLVPLLYKFGYRGPIYLTPPTRDLMVLLQLDFLEVAGR 282 Query: 111 YERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGN 159 I+ G D+ + H + +A I N Sbjct: 283 EGTNPPYSSNLIREALKHTITLDYGVVTDISPDVRLTFYNAGHILGSAIAHFHIGEGHYN 342 Query: 160 IVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I TGD+K + + T+ L AL+ ++T S K ++ + Sbjct: 343 IAFTGDFKFEKTRLFDRAATNFPRLE--------ALVMEATYGGPNDFQPSRKEAEERLI 394 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 +++ G VL+ TF+ V R + ++ + E+ Sbjct: 395 EVINRTLDRGGKVLIPTFA--VGRSQEVMIVLEEA 427 >gi|254172649|ref|ZP_04879324.1| RNA-metabolising metallo-beta-lactamase family [Thermococcus sp. AM4] gi|214033578|gb|EEB74405.1| RNA-metabolising metallo-beta-lactamase family [Thermococcus sp. AM4] Length = 648 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 82/456 (17%), Positives = 161/456 (35%), Gaps = 75/456 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D GV+ P P D P Sbjct: 182 KSRWIRITGLGGFREVGRSALLV----QTDESYVLVDFGVNIAAMRDPLKAFPHFDA--P 235 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL---------- 104 + +++ E L AI ITHAH DH G L L+ + P+Y +P L Sbjct: 236 EFRYVLDEGL-LDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIE 294 Query: 105 LEAKRVYERVSKKI-------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRS 155 ++ E + + I+ G+ D+ + H + + I + Sbjct: 295 IQHMNGMEPLYRPRDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSAIVHLHIGN 354 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + L+ +ST + + +K Sbjct: 355 GLHNIAVTGDFKFIPTRLLEPA--VSRFPR-----VETLVMESTYGGSNDYQMPREEAEK 407 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVV 265 + +++ + G VL+ + V R + I+ + E+ G + + + + Sbjct: 408 RLIEVIHHTIKRGGKVLIPAMA--VGRAQEIMMVLEEYARVGGIDVPIYLDGMIWEATAI 465 Query: 266 SVAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG 315 A + ++ + + E + + RE+ +I +G + L G Sbjct: 466 HTAYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQDIIDSGEPAIIIATSGMLVGG 525 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAEDAECP 364 + + EK+++IF S G + + V + + Sbjct: 526 PSVEYFKQLAPDEKNSIIFVSYQAEGTLGRQVQRGLREIPLVGEDGRTEVVQVNMEVHTI 585 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL 398 SGH +L +RP+ ++ +HGEP Sbjct: 586 DGFSGHADRRELISYVARLRPRPERVITVHGEPHKC 621 >gi|284173343|ref|ZP_06387312.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus 98/2] gi|261601992|gb|ACX91595.1| beta-lactamase domain protein [Sulfolobus solfataricus 98/2] Length = 422 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 146/432 (33%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 8 LGGGREVGRSAIEVG----NSDGSIILDYGVNFDEKDN-------PNFP-LQEMPGKVKG 55 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQ- 124 ++HAH DH GAL L+ VY + +L+ + + Sbjct: 56 FVVSHAHLDHIGALPIYQIGSLNTKVYGTVATRIITETMLKDFLKLSGAKIPYEWVEVRK 115 Query: 125 ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G++V++ + + H IP + + + S G I TGD L + ++ Sbjct: 116 TMDNFMAIGYGEEVEIDSLKVSLYNAGH-IPGSSIIKVSSEKGVIAFTGDINLTETKLMK 174 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + IG+ +L + E + ++++ + G VLV FS Sbjct: 175 ----PAEIENIGDANVLVMESTYGKFNHPNRKDVENDFYDKVMEVVE-SGGTVLVPAFS- 228 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + + L Y + Sbjct: 229 -LARSQEVLSVLAERNFPYPVYYDGMSREITEIMLGFKEFLNRPDLLKKAYDNFNYVKGW 287 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + K+ V S + Sbjct: 288 EDRHRAWKEKGVIVASAGMLKGGPAVYYFKKLSENSKNAVFLVSYQAIN--TPGRKLLEM 345 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + + S H L + + ++ + +V +HG P + + +L Q Sbjct: 346 GKFDEYSGLLKARLEIFDFSSHAGRRQLLEIVKSVKDLEKVVLVHGSPDNESSLADLIKQ 405 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 406 EIGVEVITPENG 417 >gi|15079675|gb|AAH11654.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo sapiens] gi|157929136|gb|ABW03853.1| cleavage and polyadenylation specific factor 3, 73kDa [synthetic construct] Length = 684 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 62/464 (13%), Positives = 145/464 (31%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV------ 110 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 111 ----------YERVSKKIPCISFQAGDKV-DVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + + I V +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHGVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P + LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|240103777|ref|YP_002960086.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein [Thermococcus gammatolerans EJ3] gi|239911331|gb|ACS34222.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein [Thermococcus gammatolerans EJ3] Length = 651 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 81/456 (17%), Positives = 159/456 (34%), Gaps = 75/456 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D GV+ P P D P Sbjct: 185 KSRWIRITGLGGFREVGRSALLV----QTDESYVLVDFGVNIAAMRDPLKAFPHFDA--P 238 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL---------- 104 + +++ E L AI ITHAH DH G L L+ + P+Y +P L Sbjct: 239 EFRYVLDEGL-LDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIE 297 Query: 105 LEAKRVYERVSKKI-------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRS 155 ++ E + + I+ G+ D+ + H + + I + Sbjct: 298 IQHMNGMEPLYRPRDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSAIVHLHIGN 357 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + L+ +ST + +K Sbjct: 358 GLHNIAITGDFKFIPTRLLEPA--VSRFPR-----VETLVMESTYGGSNDYQMPRDEAEK 410 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVV 265 + +++ + G VL+ + V R + I+ + E+ G + + + + Sbjct: 411 RLIEVIHHTIKRGGKVLIPAMA--VGRAQEIMMVLEEYARVGGIDVPIYLDGMIWEATAI 468 Query: 266 SVAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG 315 A + ++ + + E + + RE+ +I +G + L G Sbjct: 469 HTAYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQDIIDSGEPAIIIATSGMLVGG 528 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAEDAECP 364 + + K+++IF S G + + V + + Sbjct: 529 PSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQRGLREIPLVGEDGRTEVVQVNMEVHTI 588 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL 398 SGH +L +RP+ ++ +HGEP Sbjct: 589 DGFSGHADRRELISYVARLRPRPERVITVHGEPHKC 624 >gi|73979710|ref|XP_856094.1| PREDICTED: similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit) isoform 2 [Canis familiaris] Length = 580 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G + + + G ++ + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|304315326|ref|YP_003850473.1| metal-dependent RNase [Methanothermobacter marburgensis str. Marburg] gi|302588785|gb|ADL59160.1| predicted metal-dependent RNase [Methanothermobacter marburgensis str. Marburg] Length = 636 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 78/451 (17%), Positives = 150/451 (33%), Gaps = 75/451 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 +N+ +GG E+G + + +++DCGV+ D L P+ T Sbjct: 176 ENDWARLTAMGGFREVGRSCLYL----QTPNSRVLLDCGVNVAGGDDRNSYPYLNVPEFT 231 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKR 109 +L A+ ITHAH DH G L L+ + PVY + L+ A R Sbjct: 232 -----LDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHR 286 Query: 110 VYERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGN 159 E + + + + + + H + MA I N Sbjct: 287 EDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHIGDGQHN 346 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +V+TGD+K + +L I L+ +ST E +K + Sbjct: 347 MVYTGDFKYEQSRLLEPAA--SRFPRI-----ETLVMESTYGGHEDVQPPRTRAEKELVK 399 Query: 220 -IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 I K + +V R + ++ + E+ + + G + Sbjct: 400 TIYSTLKRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWEANAIHTARP 459 Query: 272 GIIKKD----------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----M 317 + KD F+S+ + ++ I G S L+ G Sbjct: 460 EYLSKDLRDQIFHMGHNPFISEIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYF 519 Query: 318 RNVKLAEKDTVIFSSRAIPGN----------EVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 + + K++++F G+ E+ + ++++ V++ + E Sbjct: 520 KWLCEDPKNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEEDKMRVYNVKMNIKTIEG---F 576 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 SGH L + I +P+ ++ HG+ Sbjct: 577 SGHSDRRQLMEYVKRISPKPEKILLCHGDNY 607 >gi|149050992|gb|EDM03165.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b [Rattus norvegicus] Length = 605 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 134/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G I + + + + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|119872614|ref|YP_930621.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674022|gb|ABL88278.1| beta-lactamase domain protein [Pyrobaculum islandicum DSM 4184] Length = 640 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 85/487 (17%), Positives = 158/487 (32%), Gaps = 89/487 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 K + LG E+G + L ++ I++DCG+ +D P +D V DI Sbjct: 176 KEGAITVTFLGAAMEVGRSAILV----STTESNILLDCGLKPGQYDEDFPLLDAV--DI- 228 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRV 110 L A+ +THAH DH G L L+ + PVY + + +E K Sbjct: 229 ------DRLDAVVLTHAHMDHVGCLPFLYKYGYRGPVYMTDPTKYQTFILLMDYIELKER 282 Query: 111 YERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGN 159 I+ + D+ + H I MA I + N Sbjct: 283 EGLEPAFSRADVESVIYHTITLDYEEVTDIAPDVKLTFYDAGHEIGSAMAHLHIGNGRYN 342 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+K +L + L+ +ST R+ + + Sbjct: 343 ILYTGDFKYGKTRLLNRA--VSKFKR-----VEMLIMESTYGGRDDVQPPRVEAENALAK 395 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAI 269 + A G VL+ FS+ R + I+ I ++ + + G ++ + + + Sbjct: 396 HVAEAVSRGGKVLIPAFST--GRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYLM 453 Query: 270 DVGIIKKDQLF-----------------LSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + + + Q+ IA + A + Sbjct: 454 YPHYLNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGM 513 Query: 313 SRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH- 366 G + ++ ++F S G I N E +R + Sbjct: 514 LNGGPVVDYFSQLAHDPRNKLVFVSYQAEG--TLGRRILNGEREFTIRSLVGGESKVEVR 571 Query: 367 --------VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 SGH +L + + I +P+ +V +HGEP +++ + Sbjct: 572 MEVVSIPGFSGHSDRRELMKYVEHIEPKPKKIVLVHGEPSKIISLATSIELKYKITTIIP 631 Query: 417 RNGKMLR 423 + G+ +R Sbjct: 632 KVGERIR 638 >gi|171184545|ref|YP_001793464.1| beta-lactamase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170933757|gb|ACB39018.1| beta-lactamase domain protein [Thermoproteus neutrophilus V24Sta] Length = 634 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 84/459 (18%), Positives = 151/459 (32%), Gaps = 89/459 (19%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 K + LG E+G + L ++ +++DCG+ +D P +D V DI Sbjct: 170 KEGAITVTFLGAAMEVGRSAILV----STTESNVLLDCGLKPGQYDEDFPMLDAV--DI- 222 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRV 110 L A+ +THAH DH G L L+ + PVY + + +E K Sbjct: 223 ------DRLDAVVLTHAHMDHVGCLPFLYKYGYRGPVYMTDPTKYQAFILLMDYIELKER 276 Query: 111 YERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGN 159 I+ + D+ + H I MA I + N Sbjct: 277 EGLEPAFSKADVESVIYHTITLDYEEVTDIAPDVKLTFYDAGHEIGSAMAHLHIGNGRYN 336 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+K +L + L+ +ST R+ + + Sbjct: 337 ILYTGDFKYGKTRLLNRA--VSKFKR-----VEMLIMESTYGGRDDVQPPRVEAENALAK 389 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAI 269 + A G VL+ FS+ R + I+ I ++ + + G ++ + + + Sbjct: 390 HVAEAVSRGGKVLIPAFST--GRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYLM 447 Query: 270 DVGIIKKDQLF-----------------LSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + + + Q+ IA + A + Sbjct: 448 YPHYLNPEVAEEVYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGM 507 Query: 313 SRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV---------IA 358 G + ++ ++F S G I N E VR + Sbjct: 508 LNGGPVVDYFSQLAHDPRNKLVFVSYQAEG--TLGRRILNGEREFVVRSLVGGEAKVEMR 565 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 +A SGH +L + + + +P+ +V IHGEP Sbjct: 566 MEAVSIPGFSGHSDRRELMKYVEHLEPKPRKIVLIHGEP 604 >gi|118572556|sp|Q2YDM2|INT11_BOVIN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName: Full=Cleavage and polyadenylation-specific factor 3-like protein; Short=CPSF3-like protein gi|158455110|gb|AAI10156.2| CPSF3L protein [Bos taurus] Length = 599 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 71/467 (15%), Positives = 142/467 (30%), Gaps = 80/467 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ D D FPD ++ + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFSD----DRRFPDFSYNTRS 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----V 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDK 114 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIV 161 + + Q ++ + + I+ ++V Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPSLLITESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMDLKAPIYFSTGLTEKANHYYKLFIP 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 ++ + ++ + + P + V S Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRAFADSPGPMV----------VFATPGMLHAGQSL 334 Query: 333 ---RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPY 372 R GNE + + + +L +G +V+ + + S H Sbjct: 335 QIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + ++ P+ ++ +HGE + K+ QE NG Sbjct: 395 AKGIMQLVGQAEPENVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 441 >gi|288561234|ref|YP_003424720.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] gi|288543944|gb|ADC47828.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] Length = 636 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 74/451 (16%), Positives = 151/451 (33%), Gaps = 77/451 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFP 56 ++ + +GG E+G + L + +++DCGV+ D + GV P Sbjct: 177 SDWVRLTAMGGFKEVGRSCMLL----QTPNSRVLLDCGVNVAGQDDKTSFPMLGV----P 228 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--------- 106 + + ++L A+ ++HAH DH G + L+ + PVY + L+ Sbjct: 229 EFS-----IQDLDAVVLSHAHLDHCGFIPYLYHYGYEGPVYCTSATRDLMTLLQMDYIDI 283 Query: 107 AKRVYERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSP 156 A R + + + + + + H I M I Sbjct: 284 AHRDNNPLPFNAKHVQKEVKHTITLDYGVVTDISPDIKLTLHNAGHIIGSAMCHFHIGDG 343 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 N+++TGD+K + +L T + + + +ST E S +K Sbjct: 344 AHNLLYTGDFKYEKSRLLEPAT--TRFPR-----VESCIMESTYGGHEDVTPSRNNAEKE 396 Query: 217 IYD-IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--IGRKIVLLGSSLKRVVSVAIDVGI 273 + I K K V +V R + ++ + E+ I + L ++ A V Sbjct: 397 LMKTIYKTIKRGGKVLLPVFAVGRAQELMIVLEEYMHHDIIETVPIHLDGMIWEATAVHT 456 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS- 332 + + L L+ + + +Q + + ++ GE + +S Sbjct: 457 ARPEYLSKELRDQILHMSRNPFMTESFNQVQNNAERKEIVEGEPSIILSTSGMMTGGNSV 516 Query: 333 ------------RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV------------- 367 I + G + ++ + ++ ED + V Sbjct: 517 EYFKWLCEDKKNTLIFVGYQSEGSLGRKIQKGHKQLPFEDEDGKTRVFNVEMEVKTIEGF 576 Query: 368 SGHPYPNDLKRMYQWIRPQ--VLVAIHGEPL 396 SGH L + + P+ ++ HG+P Sbjct: 577 SGHSNRRQLMEFAKRLHPRPDKIITCHGDPY 607 >gi|300712341|ref|YP_003738155.1| mRNA 3'-end processing factor [Halalkalicoccus jeotgali B3] gi|299126024|gb|ADJ16363.1| mRNA 3'-end processing factor [Halalkalicoccus jeotgali B3] Length = 420 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 62/409 (15%), Positives = 128/409 (31%), Gaps = 78/409 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG GEIG + L G +++D G+S +D + A Sbjct: 6 LGGAGEIGRSAILLG----GDDGTLLLDFGMSTDNPPRLPLDC-------------DPDA 48 Query: 71 IFITHAHEDHYGALHDLWS-FLHVPVYASPFAIG----LLEAKRVYERVSKKIPCI---- 121 + ++H H DH GAL L S V+ + L S + P Sbjct: 49 VVVSHGHLDHAGALPALLSGDARPSVHWTAPTRELATTLARDTLKLHGGSYRCPFTRTDL 108 Query: 122 --------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + G+ F + + H IP + ++I ++++GD+ D + Sbjct: 109 ARLTQVSETHEYGEPFSAAGFEVTLLAAGH-IPGSAHVLIEDGDTRLLYSGDFHTDSQRL 167 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLV 230 + T ++C+ST + E +++ + ++ G V+V Sbjct: 168 VSKTT--------ARPDADLVICESTYSDVTHEPRDE--VERRFAESVRTTLWEGGTVVV 217 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL--------- 281 F+ + R + ++ I + + G + + ++ + F Sbjct: 218 PAFA--IGRTQEMLLICAEYDIPCYVDGMGKEVTRMLRRHPEFVRDPEAFDRAVSHARFV 275 Query: 282 --SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN- 338 D R+ ++ T A+ + ++ + V + + G Sbjct: 276 TGQDGQRKRIARQNAAIVTTSGMLSGGPAMTYI-----PEIRGNPTNKVAMTGYQVEGTP 330 Query: 339 -----EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 E I R++ R+ + D S H + Sbjct: 331 GRELLETGSAEIDGRVMPVAARIESYD------FSAHADREGVLEFLAA 373 >gi|116753406|ref|YP_842524.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116664857|gb|ABK13884.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 635 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 101/273 (36%), Gaps = 42/273 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I++DCG++ DD L P++ + Sbjct: 177 KDQWVRISTLGGCREVGRSCMLL----STPESKIIVDCGINVGSDDSATPYLYVPEVYPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 + A+ +THAH DH G + L+ + P+Y +P L +E Sbjct: 233 ----SQIDAVVLTHAHLDHSGLVPMLYKYGYEGPIYCTPPTRDLYVLLQLDYIEVAGREG 288 Query: 113 RVSKKI---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV--GNIV 161 + I+ GD D+ + ++ I + N+ Sbjct: 289 KRLPYDSSMIREALKHTITLNYGDVTDIAPDTKLTMHNAGHILGSAIAHFHIGDGLYNVA 348 Query: 162 HTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+K + + + L L+ ++T S K + ++ + Sbjct: 349 FTGDFKYEKTRLFDPAVNSFPRLE--------TLVIEATYGGANSIQPSRKEAENHLLRV 400 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 ++ G V++ F+ V R + ++ + E+ Sbjct: 401 VRETIKRGGKVVIPAFA--VGRSQEVMVVLEEA 431 >gi|191637930|ref|YP_001987096.1| Predicted exonuclease of the beta-lactamase fold [Lactobacillus casei BL23] gi|145309106|gb|ABP57782.1| hydrolase [Lactobacillus casei BL23] gi|190712232|emb|CAQ66238.1| Predicted exonuclease of the beta-lactamase fold [Lactobacillus casei BL23] gi|327381999|gb|AEA53475.1| hypothetical protein LC2W_1141 [Lactobacillus casei LC2W] gi|327385157|gb|AEA56631.1| hypothetical protein LCBD_1133 [Lactobacillus casei BD-II] Length = 415 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 69/415 (16%), Positives = 141/415 (33%), Gaps = 48/415 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSNETVSSAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ ++ AIFI+H H DH GAL L +P+Y S + L + Sbjct: 56 ELFFDQPDVYTHEAIFISHLHIDHMGALQYLKK--PIPIYLSEPSYKLYQLLIKLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 + +G ++ +H P MAL++ H+GD +L+ Sbjct: 114 VANLHPLAYEQPITIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERV 173 Query: 176 ----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI---SEKGIKKNIYDIMKNAKGCV 228 +++ L EG + + +E ++K ++ + V Sbjct: 174 HAWAKRFNQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ + + R+ S A GR++V V++ D +S Sbjct: 234 VINPYIRNYERLASFQASAHTAGRQLVWEPDDAA-VLTTMSDQKPDAILGQTISLTDIAR 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-RAIPGNEVAIGHIKN 347 P+ ++ L +L+ T I S+ + + +K+ Sbjct: 293 DPQHYVL-------QNSFDHLERLTD--------MPITTYIHSNGEPLGDYDPRFAQLKD 337 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + ++ SGH DL + + + P+ +V H A Sbjct: 338 WLEAHHIPLQF------MNASGHASREDLITLAKEVNPRTIVPWHSFHPEREAEA 386 >gi|114576016|ref|XP_001154552.1| PREDICTED: similar to Cleavage and Polyadenylation Specifity Factor protein isoform 5 [Pan troglodytes] Length = 619 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G + + + G ++ + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|282165070|ref|YP_003357455.1| hypothetical protein MCP_2400 [Methanocella paludicola SANAE] gi|282157384|dbj|BAI62472.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 636 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 80/455 (17%), Positives = 154/455 (33%), Gaps = 88/455 (19%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + + LGG E+G + L + I+IDCGVS + L P+++ + Sbjct: 177 KEQWIRITTLGGCKEVGRSSFLL----STPETRILIDCGVSTGAEANGTPYLYVPEVSPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 N+ A+ +THAH DH G + L+ + PVY +P L +E Sbjct: 233 ----SNIDAVVLTHAHLDHCGMIPLLYKYGYEGPVYMTPPTRDLMALLQLDYIEVANREG 288 Query: 113 RVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV--GNI 160 + I+ GD D+ + H I + N+ Sbjct: 289 KRPPYESAMIRETLKHTITLNYGDVTDIAPDIRLTFYNSGH-ILGSAIAHFHVGEGLYNV 347 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 +GD+K + + + I ++ +ST S + + ++ +I Sbjct: 348 AFSGDFKYEKTRLFDPAVN-------QFPRIETMVMESTYGGMHDMQPSRREAEIDLQNI 400 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 ++ G LV TF+ V R + ++ + E+ + L G ++ A Sbjct: 401 IRRTLQRGGKALVPTFA--VGRSQEVMIVLEEAIRKGIIDNVPVYLDG-----MIWEATA 453 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIV----IATGSQGEPRSALAQ-----------LSRG 315 + + L + + + + + + SQ + +S LA + G Sbjct: 454 IHTTYPEYLNVELQDMIFHKGQNPFLSSSFVQVDSQQKRQSILADPSPCIVLATSGMMNG 513 Query: 316 -----EMRNVKLAEKDTVIFS---------SRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 + +++T+IF R G + R V + Sbjct: 514 GPVMEYFKQYGADKRNTLIFVGYQAEGTMGRRIQKGWTEIPMSTEGRTDVMRVEMEVATV 573 Query: 362 ECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 + SGH L + + RP+ ++ HG+ Sbjct: 574 DG---FSGHSDRRQLMEWVKRMDPRPERIITNHGD 605 >gi|150403348|ref|YP_001330642.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150034378|gb|ABR66491.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 433 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 140/442 (31%), Gaps = 49/442 (11%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + + + ++ DCGV ++ + + + N + Sbjct: 7 GGASEVGRSCVEV----KTEKSTVLFDCGVKLSSEES----------EYPILDNLNADCV 52 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVY---------ERVSKKIPCI 121 F +HAH DH G + L VP +YA+ + + + + + Sbjct: 53 FASHAHLDHTGGIPVLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIPYDKADV 112 Query: 122 SF--------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + + F E H IP + + + +V+TGD K+ D + Sbjct: 113 NKSLNLFRKARYNHPKNFKDFEFEFFNAGH-IPGSSTISLNYSGKRVVYTGDTKVSDTDL 171 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 D E I L+ +ST E K I I + + Sbjct: 172 -VKGADLS----YTKEHIDCLIVESTYGDSNQENREEAE-KNFINKIKETLDRGGIPLVP 225 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVV-SVAIDVGIIKKDQLFLSDESFGL 288 +V R + I+ I + + + G + R++ + + + + Sbjct: 226 VFAVDRSQEILMILNKHDFGVPVYFDGLGRKITRIMLQYPAFLNHPDDLKAAFLNVTEVE 285 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN---EVAIGHI 345 I+ G + A + G + E +S G E A H+ Sbjct: 286 SKDRPKIIKEIRQNGGIIVSTAGMLEGGPIIPYITEFMKEPKNSLIFTGYQVEETAGRHL 345 Query: 346 KN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 +L V + S H ++L+ + + P+ LV HGE + K+ Sbjct: 346 LETGKLEIGEFDVEPKFEIASYQFSAHGEMDELRHIVKKANPETLVIQHGEEEVVNVFKD 405 Query: 404 LALQEGIACVPPVRNGKMLRLF 425 A+ EG R+ Sbjct: 406 WAVSEGFNENKVFAPKVGNRIN 427 >gi|303244279|ref|ZP_07330616.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus okinawensis IH1] gi|302485406|gb|EFL48333.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus okinawensis IH1] Length = 635 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 78/466 (16%), Positives = 143/466 (30%), Gaps = 56/466 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + I+IDCG++ D D FP Sbjct: 179 WIRMSFLGGAREVGRTCNYL----QTPESRILIDCGINVAIDG----DKAFPHFDAPEFS 230 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 + + A+ ITHAH DH G + L+ + PVY S L+ + K+ Sbjct: 231 IEEIDAVVITHAHLDHCGFVPGLFRYGYDGPVYCSKPTRDLMTLLQKDYLDIAEKEGKVM 290 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 S + K I+ P A I H GD + Sbjct: 291 PYSSKDIKKCVKHTIPIDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHIGDGLYNVAYTG 350 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCV 228 + L + ++ +ST + +K +++ KG V Sbjct: 351 DIKFEASRLLEPAVCQFPRLETIIIESTYGGYDDVLPDRAETEKEFLNVVAETIKRKGKV 410 Query: 229 LVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKK----------- 276 ++ F + R + ++ + E+ + I L ++ A + Sbjct: 411 IIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNIRNRI 468 Query: 277 ----DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDT 327 D FLS+ + I ++ + + G +++ EK+ Sbjct: 469 FHEGDNPFLSEVFRKVKNTNNRRNIIDSNEPCIILTTSGMLSGGPSVEYFKSLAEDEKNA 528 Query: 328 VIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 ++F G I I NR + + SGH L + Sbjct: 529 IVFVGYQAEGTLGRKIQRGWKEIPIMNRNGKSKAVKVNLSVHTLEGFSGHSDRKQLIKYL 588 Query: 381 QWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ P+ ++ +HGE V A + N +R+ Sbjct: 589 RKLKPMPERILTVHGEASKCVDLASTAYKLFKKETRAPMNLDAIRM 634 >gi|18377654|gb|AAL66977.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] Length = 693 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 143/465 (30%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + + + I+ DCG+ + P I Sbjct: 20 DQLIVTPLGAGSEVGRSCVYMSFRGKN----ILFDCGIHPAYSGM----AALPYFDEID- 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 ++ + ITH H DH +L + V+ + + + Sbjct: 71 -PSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVE 129 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + ++K + I V+V H + ++ I++TG Sbjct: 130 DMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGH-VLGAAMFMVDIAGVRILYTG 188 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST+ ++ I EK I+ + Sbjct: 189 DYSREEDRHL-------RAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGII 274 G VL+ F+ + R + ++ I ++ I K+ ++V + Sbjct: 242 QG-GRVLIPAFA--LGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILS 298 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + + + P + LSR + + Sbjct: 299 MNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDK 358 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ I + G NE + N L + + S H Sbjct: 359 KNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHY-----ISFSAHADYAQTS 413 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + ++L + + Sbjct: 414 TFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNC 458 >gi|20092670|ref|NP_618745.1| cleavage and polyadenylation specificity factor [Methanosarcina acetivorans C2A] gi|19917954|gb|AAM07225.1| cleavage and polyadenylation specificity factor [Methanosarcina acetivorans C2A] Length = 637 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 71/435 (16%), Positives = 144/435 (33%), Gaps = 65/435 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCGV+ D+ L P++ + Sbjct: 177 KDQWVRVTALGGCKEVGRSCFLL----STPESRILIDCGVNVGSDENMTPYLYVPEVFPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EA 107 + A+ +THAH DH G + L+ + PVY +P L+ E Sbjct: 233 ----NQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEG 288 Query: 108 KRV--YERVSKKI--PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 K++ + K I + D+ + H + ++ I + N+V Sbjct: 289 KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + + ++ ++T + K +K++ ++ Sbjct: 349 FTGDYKYEKTRLFDPAVN--KFPR-----VETVISEATYGNSNAFQPALKDAEKHLQMVV 401 Query: 222 KNAKGCVLVTTFSS-SVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGI 273 KN + + +V R + ++ + E+ + L G + A Sbjct: 402 KNTVERGGIALIPAFAVGRSQEVMIVLEESIRKGLIPEVPVYLDGMIWEATAIHATHPEY 461 Query: 274 IKKDQLFLSDESFGLY-----------PREQLIVIATGSQGEPRSALAQLS----RGEMR 318 + D L + + +I S ++ R Sbjct: 462 LNNDLRKLIFQKGQNPFLSECFKPVDSHETRQKIIQNPHPCVILSTSGMMNGGPVMDYFR 521 Query: 319 NVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHP 371 ++T++F G I + G E + + V SGH Sbjct: 522 TFAEDPRNTLVFVGYQADGTVGRRIQKGWKEIPMTGKNGSTEILKMNMEVQVVDGFSGHS 581 Query: 372 YPNDLKRMYQWIRPQ 386 L + ++P+ Sbjct: 582 DRRQLMEYIKRMQPR 596 >gi|15219848|ref|NP_176297.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I); protein binding [Arabidopsis thaliana] gi|30696512|ref|NP_849835.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I); protein binding [Arabidopsis thaliana] gi|79320389|ref|NP_001031215.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I); protein binding [Arabidopsis thaliana] gi|75262219|sp|Q9C952|CPSF3_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-I; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit I; Short=AtCPSF73-I; Short=CPSF 73 kDa subunit I gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage and polyadenylation specificity factor; 72745-70039 [Arabidopsis thaliana] gi|23297661|gb|AAN13003.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|24415578|gb|AAN41458.1| putative cleavage and polyadenylation specificity factor 73 kDa subunit [Arabidopsis thaliana] gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010 [Arabidopsis thaliana] gi|332195645|gb|AEE33766.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] Length = 693 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 143/465 (30%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + + + I+ DCG+ + P I Sbjct: 20 DQLIVTPLGAGSEVGRSCVYMSFRGKN----ILFDCGIHPAYSGM----AALPYFDEID- 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 ++ + ITH H DH +L + V+ + + + Sbjct: 71 -PSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVE 129 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + ++K + I V+V H + ++ I++TG Sbjct: 130 DMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGH-VLGAAMFMVDIAGVRILYTG 188 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST+ ++ I EK I+ + Sbjct: 189 DYSREEDRHL-------RAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGII 274 G VL+ F+ + R + ++ I ++ I K+ ++V + Sbjct: 242 QG-GRVLIPAFA--LGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILS 298 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + + + P + LSR + + Sbjct: 299 MNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDK 358 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ I + G NE + N L + + S H Sbjct: 359 KNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHY-----ISFSAHADYAQTS 413 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + ++L + + Sbjct: 414 TFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNC 458 >gi|18977777|ref|NP_579134.1| cleavage and polyadenylation specifity factor protein [Pyrococcus furiosus DSM 3638] gi|18893520|gb|AAL81529.1| cleavage and polyadenylation specifity factor protein [Pyrococcus furiosus DSM 3638] Length = 651 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 82/475 (17%), Positives = 162/475 (34%), Gaps = 80/475 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D G++ P P D P Sbjct: 185 KSRWIRITGLGGFREVGRSALLV----QTDESFVLVDFGINVAALNDPYKAFPHFDA--P 238 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL--------- 105 + +++KE L AI ITHAH DH G L L+ + P+Y +P L+ Sbjct: 239 EFQYVLKEGL-LDAIVITHAHLDHSGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFVE 297 Query: 106 --EAKRVYERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMAL-VIRS 155 ++ K + +D G + H + + I + Sbjct: 298 IQQSNGQEPLYKPKDIKEVIKHTITLDYGEVRDISPDVRLTLHNAGHILGSAIVHLHIGN 357 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + + L+ +ST + + +K Sbjct: 358 GLHNIAVTGDFKFIPTRLLEP-------ASYRFPRLETLVMESTYGGANDIQMPREEAEK 410 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVV 265 + +++ G VL+ + V R + I+ + E+ G + + + + Sbjct: 411 RLIEVIHQTIRRGGKVLIPAMA--VGRAQEIMMVLEEYARVGGIDVPIYLDGMIWEATAI 468 Query: 266 SVAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG 315 A + K + + E + + +E+ +I + ++ L G Sbjct: 469 HTAYPEYLSKTLREQIFKEDYNPFLSEIFHPVANSKERQDIIDSNEPAIIIASSGMLVGG 528 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECP 364 + + +++++IF S G V + V + + Sbjct: 529 PSVEYFKQLASDKRNSIIFVSYQAEGTLGRQVQSGVREIPMIGESGRTEVIKVNMEVHTI 588 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP HK+ L Sbjct: 589 DGFSGHADRKELMNYVAKVRPRPERVITVHGEPQKCLDLATSIHKKFGLSTRAPN 643 >gi|198413502|ref|XP_002128796.1| PREDICTED: similar to cleavage and polyadenylation specific factor 3-like [Ciona intestinalis] Length = 605 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 61/438 (13%), Positives = 143/438 (32%), Gaps = 61/438 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ +PLG ++G + + G + IM+DCG+ +D + FP +I Sbjct: 3 EIKLVPLGAGQDVGRSCIIVTLGGKN----IMLDCGMHMGFND----ERRFPYFDYITGG 54 Query: 65 R----KNLMAIFITHAHEDHYGALHDL--WSFLHVPVYASPFAIGLLEAKRVYERV---- 114 + +++ + I+H H DH GAL + P+Y + + R Sbjct: 55 KGTLTEHIDCVIISHFHLDHCGALPYMSEMKGYDGPIYMTHPTKAICPILLEDYRKITVD 114 Query: 115 -SKKIPCISFQAGDKVDVGAFSIESVRVNH-------------SIPETMALVIRSPVGNI 160 + + + + H + +++ ++ Sbjct: 115 RKGETNFFDSKMIKDCMKKVIPVNLHQTIHVDDQLEIKAYYAGHVLGAAMFLLKVGTDSV 174 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 ++TGD+ + D LG + L+ +ST A R+ E+ K ++ Sbjct: 175 LYTGDYNMTPDRHLGA-------AWVDKCRPDVLITESTYATTIRDSKRCRERDFLKKVH 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVG 272 + +++ G VL+ F+ + R + + + E I + Sbjct: 228 ERVEDG-GKVLIPVFA--LGRAQELCILLESYWDRMNLKVPIYFSAGLTNKATEYYKLFI 284 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLA 323 ++ + ++ + + P + + G + Sbjct: 285 TWTNQKIKDTFVERNMFDFKHIKEFNRSYIDNPGPMVVFATPGMLHGGLSLEIFKRWCTN 344 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 EK+ +I + G + ++ ++ G V + + S H + ++ + Sbjct: 345 EKNMIIMPGYCVAGTVGNKILSGMRKIELKPGQVVEIKMQVEYMSFSAHADAKGIMQLIR 404 Query: 382 WIRPQVLVAIHGEPLHLV 399 P ++ +HGE + Sbjct: 405 MCEPSNVMLVHGEAGKMD 422 >gi|119576642|gb|EAW56238.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_f [Homo sapiens] Length = 606 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 71/461 (15%), Positives = 142/461 (30%), Gaps = 81/461 (17%) Query: 12 GGVGE-IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KN 67 GG G+ +G + L + +M+DCG+ +D D FPD ++I + Sbjct: 15 GGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQNGRLTDF 66 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKIPC 120 L + I+H H DH GAL P+Y + + R + Sbjct: 67 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 126 Query: 121 ISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWK 167 + Q ++ + + I+ ++V+TGD+ Sbjct: 127 FTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 186 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAK 225 + D LG I L+ +ST A R+ E+ K +++ ++ Sbjct: 187 MTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG- 238 Query: 226 GCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G VL+ F+ + R + + + I ++ ++ Sbjct: 239 GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKI 296 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAI 335 + ++ + + P + V S R Sbjct: 297 RKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKW 346 Query: 336 PGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKR 378 GNE + + + +L +G +V+ + + S H + + Sbjct: 347 AGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQ 406 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + P+ ++ +HGE + K+ QE NG Sbjct: 407 LVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPANG 447 >gi|147919476|ref|YP_686784.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit [uncultured methanogenic archaeon RC-I] gi|110622180|emb|CAJ37458.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit [uncultured methanogenic archaeon RC-I] Length = 636 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 73/449 (16%), Positives = 146/449 (32%), Gaps = 76/449 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCGV+ + L P+++ + Sbjct: 177 KDQWIRVTTLGGCKEVGRSSFLL----STPETRILIDCGVNTGAESNGTPYLYVPEVSPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 ++ A+ ITHAH DH G + L+ + P+YA+P L +E Sbjct: 233 ----SSIDAVVITHAHLDHCGIVPLLFKYGYEGPIYATPPTRDLSALLQLDYIEVANREG 288 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ GD D+ + H + +A I + N+ Sbjct: 289 KRPPYDSALIREALKRTITLNYGDVTDIAPDVRLTFYNSGHILGSAIAHFHIGEGLYNVA 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + + ++ +ST + + + I ++ Sbjct: 349 FTGDFKYEKSKLFDAAVN-------NFPRVETVIMESTYGGMHDMQPARREAEIEIQQVI 401 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS------------ 259 K G VL+ TF+ V R + ++ + E+ + L G Sbjct: 402 KQTLARGGKVLIPTFA--VGRSQEVMIVLEEAIRRGIIDNVPVYLDGMIWEATAIHTTYP 459 Query: 260 -----SLKRVVSVAIDVGIIKKDQLFLSDESFGLY---PREQLIVIATGSQGEPRSALAQ 311 L+ ++ + + + IV+AT + Sbjct: 460 EYLNVELQDMIFHKGQNPFLSPSFVQVDSPQKREKILADPSPCIVLATSGMMNGGPVMEY 519 Query: 312 LSRGEMR----NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L + + + R G + + + + + Sbjct: 520 LKTYGHDRRNTLIFVGYQAEGTLGRRIQKGWNELPMSVGGKTEIMKINLQVTTVDG---F 576 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L + + RP+ ++ HG+ Sbjct: 577 SGHSDRRQLMEYVKRMDPRPERIITNHGD 605 >gi|307177772|gb|EFN66769.1| Cleavage and polyadenylation specificity factor subunit 3 [Camponotus floridanus] Length = 1750 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 63/462 (13%), Positives = 132/462 (28%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + + Sbjct: 1079 ESDLLSIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLV 1130 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + + + I Sbjct: 1131 E--ADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIA 1188 Query: 120 C-----------ISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVH 162 S + ++ + H + +I I++ Sbjct: 1189 TEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGH-VLGAAMFMIEIAGVKILY 1247 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L I N L+ +ST ++ + + + Sbjct: 1248 TGDFSRQEDRHLMA-------AEIPNIHPDVLITESTYGTHIHEKREDRE-GRFTNLVHE 1299 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 ++ R + ++ I ++ + SSL + + Sbjct: 1300 IVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNA 1359 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + E P + LSR + Sbjct: 1360 MNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDA 1419 Query: 325 KDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI + + G + G ++ + + + S H Sbjct: 1420 KNGVIIAGYCVEG---TLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 1476 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P +V +HGE L + + Sbjct: 1477 IRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPSTSMEIHN 1518 >gi|224108267|ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1| predicted protein [Populus trichocarpa] Length = 639 Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 147/439 (33%), Gaps = 67/439 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG E+G + + + K IM DCG+ DD +PD + I K R + Sbjct: 8 LGAGQEVGKSCVVV----TINGKRIMFDCGMHMGYDDH----RRYPDFSLISKSRDFDHS 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L + ITH H DH GAL + P+Y + L R + Sbjct: 60 LDCVIITHFHLDHVGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQ 119 Query: 126 GDKVDV-------------------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + I + H + + +V+TGD+ Sbjct: 120 FTSLHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGH-VLGAAMFYAKVGDSAMVYTGDY 178 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNA 224 + D LG I + L+ +ST A R+ E+ K +++ + Sbjct: 179 NMTPDRHLGA-------AQIDRLELDLLITESTYATTIRDSKYAREREFLKAVHECVAGG 231 Query: 225 KGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLLGSS-------LKRVVSVAIDVGI 273 G VL+ TF+ + R + + D E++ K+ + S+ L + ++ Sbjct: 232 -GKVLIPTFA--LGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQK 288 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTVI 329 +K+ + F +I + +S G + E + + Sbjct: 289 VKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLIT 348 Query: 330 FSSRAIPGNEVAIGHI-----KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + G N + + V + + + S H + + +++ Sbjct: 349 LPGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQ--LSFSPHTDSKGIMDLTKFLS 406 Query: 385 PQVLVAIHGEPLHLVAHKE 403 P+ ++ +HGE +V+ KE Sbjct: 407 PRNVILVHGEKPKMVSLKE 425 >gi|74211665|dbj|BAE29190.1| unnamed protein product [Mus musculus] Length = 684 Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 69/464 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNI 217 +++TGD+ +D L I N L+ +ST E+ + + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYRTHIHEKREEREARFCNTV 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAID 270 +DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 HDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQ 283 Query: 271 VGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRN 319 + D++ + + + + + + P LSR + Sbjct: 284 TYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFES 343 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + + G + + + G ++ + + + S H Sbjct: 344 WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|170587204|ref|XP_001898368.1| cpsf3-prov protein [Brugia malayi] gi|158594194|gb|EDP32780.1| cpsf3-prov protein, putative [Brugia malayi] Length = 700 Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 78/506 (15%), Positives = 147/506 (29%), Gaps = 71/506 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ LV PLG E+G + + K I++DCG+ + GVD P + F+ Sbjct: 10 SDTLVITPLGSGQEVGRSC----HYLTFKGKKILLDCGI---HPGMSGVDA-LPFVDFVD 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 E +L + +TH H DH GAL L + + + Sbjct: 62 CEELDL--LLVTHFHLDHCGALPWLLEKTAFRGRCFMTHATKAIYRMSIGDYLKVSKYGG 119 Query: 110 --------VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 E + K + I ++ +V V + +I I Sbjct: 120 SSDNRMLYNEEDLEKSMEKIEVIDFHEQKEVNGIKF-WCHVAGHVLGACMFMIEIAGVRI 178 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 ++TGD+ +D L + L+C+ST + E+ + +I Sbjct: 179 LYTGDFSRLEDRHLCA-------AELPTVSPDVLICESTYGTQVHESRDEREKRFTSIVH 231 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR--------- 263 + G L+ F+ + R + ++ I ++ V SSL + Sbjct: 232 EIVGRGGRCLIPAFA--LGRAQELLLILDEYWESHPELQDIPVYYASSLAKKCMAVYQTF 289 Query: 264 ----VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 + + + + E + P LSR N Sbjct: 290 VSGMNSRIQKQIALNNPFVFKHVSNLKSIDHFEDVGPCVV--LASPGMLQNGLSRELFEN 347 Query: 320 VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ I + + G + + + + G ++ + S H Sbjct: 348 WCTDSKNGCIIAGYCVEGTLAKHILSEPEEIVAMNGQKLAMRLQVAYISFSAHTDYTQTS 407 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVV 436 + +RP LV +HGE + Q + + E Sbjct: 408 DFIRALRPPHLVLVHGEMNEMNRLKAAIIRQYEDESDFHIEVYNPRNTESVELHFRGEKT 467 Query: 437 HG---LFLKDGFLIGKFADLGIAKRR 459 G+ + +R Sbjct: 468 AKVVGKMAMTPPGDGRVLSGVLIRRN 493 >gi|15897318|ref|NP_341923.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] gi|13813531|gb|AAK40713.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] Length = 492 Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 146/432 (33%), Gaps = 45/432 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + G +S I++D GV+F + D P+ + + + Sbjct: 78 LGGGREVGRSAIEVG----NSDGSIILDYGVNFDEKDN-------PNFP-LQEMPGKVKG 125 Query: 71 IFITHAHEDHYGALH-DLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQ- 124 ++HAH DH GAL L+ VY + +L+ + + Sbjct: 126 FVVSHAHLDHIGALPIYQIGSLNTKVYGTVATRIITETMLKDFLKLSGAKIPYEWVEVRK 185 Query: 125 ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G++V++ + + H IP + + + S G I TGD L + ++ Sbjct: 186 TMDNFMAIGYGEEVEIDSLKVSLYNAGH-IPGSSIIKVSSEKGVIAFTGDINLTETKLMK 244 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + IG+ +L + E + ++++ + G VLV FS Sbjct: 245 ----PAEIENIGDANVLVMESTYGKFNHPNRKDVENDFYDKVMEVVE-SGGTVLVPAFS- 298 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI--DVGIIKKDQLFLSDESFGLYPREQ 293 ++R + ++ + + + + R ++ + + + L Y + Sbjct: 299 -LARSQEVLSVLAERNFPYPVYYDGMSREITEIMLGFKEFLNRPDLLKKAYDNFNYVKGW 357 Query: 294 LIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + A A + +G + + K+ V S + Sbjct: 358 EDRHRAWKEKGVIVASAGMLKGGPAVYYFKKLSENSKNAVFLVSYQAIN--TPGRKLLEM 415 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQ 407 + + S H L + + ++ + +V +HG P + + +L Q Sbjct: 416 GKFDEYSGLLKARLEIFDFSSHAGRRQLLEIVKSVKDLEKVVLVHGSPDNESSLADLIKQ 475 Query: 408 EGIACVPPVRNG 419 E V NG Sbjct: 476 EIGVEVITPENG 487 >gi|119576637|gb|EAW56233.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b [Homo sapiens] Length = 329 Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 113/358 (31%), Gaps = 51/358 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 168 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 219 Query: 237 VSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + R + + + I ++ ++ + ++ Sbjct: 220 LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFE 279 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGH 344 + + P + V S R GNE + Sbjct: 280 FKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVR 327 >gi|255524630|ref|ZP_05391583.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255511654|gb|EET87941.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 827 Score = 113 bits (283), Expect = 6e-23, Method: Composition-based stats. Identities = 74/504 (14%), Positives = 162/504 (32%), Gaps = 79/504 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E+G + L + + I++DCG+ P PD I ++ Sbjct: 1 MKISFLGGAHEVGGSCILLKIYNKN----ILLDCGIRQGASKDP-----LPDFRTIQEQG 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLE---------AKRVYERVS 115 + AI I+HAH DH G+L + +YA+ L++ K + Sbjct: 52 G-IDAIIISHAHMDHIGSLPIISKEYPGAKIYANNMTKDLMKVLLYDSLKIMKNREAEIP 110 Query: 116 KKIPCISFQAGDKVDVGAFSIES---------VRVNHSIPETMALVIRSPVGNIVHTGDW 166 +++ + +E I + I +P G++ ++GD+ Sbjct: 111 LYAEVDVENMLNRIFTINYMVEFPIFEDIKITFYTAGHIAGASCVYITTPEGSLFYSGDF 170 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK----NIYDIMK 222 + + + + A + ++T R + + +++ + + + Sbjct: 171 SVFSQKTVEGL-------KVPKLRPDAAIFETTYGDRLH---ANREVEEERLLQLINECE 220 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIK 275 +G +L+ F+ + R + II I ++ KI + G + + ++ + + Sbjct: 221 ANRGKMLIPAFA--LGRAQEIILIIKKALNKKSIKNVKIYVDG--MIKDINRVYKLNPLY 276 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-----------AQLSRGEMRNV---K 321 G+ P +IA + L + + G K Sbjct: 277 LKNSLGKKILRGIEPFYDDNIIAVDKKEIREKILEDKEPCIIISSSGMLTGGYSQYYAEK 336 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV--------RVIAEDAECPVHVSGHPYP 373 +A + E + N L E+ + + V +S H Sbjct: 337 IAPMENGYIVITGYQDEESPGRKLLNLLEEEEDKKLELNGRSIPVKCKVEKVGLSAHGDK 396 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIID 433 ++K + + P + +HG + + + L E A V + + I+ Sbjct: 397 GEIKSLINLLTPNNIFMVHGNEEVVESFSKELLSEVRARVYAPK---CGECYEVNIKNPR 453 Query: 434 EVVHGLFLKDGFLIGKFADLGIAK 457 + K + I + Sbjct: 454 KQWKKQMPHVIKSSSKLDENNIKE 477 >gi|169838022|ref|ZP_02871210.1| metallo-beta-lactamase family protein [candidate division TM7 single-cell isolate TM7a] Length = 140 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 1/141 (0%) Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD 474 NG+ L L + + V G DGF IG + + R+ L+ G + + + Sbjct: 1 MTENGEKLELSKNSFRSVGRVPSGATFIDGFGIGDVGNAVLKDRQNLADDGIVIITISQY 60 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + E+V G Y+ D + K V T ++++ K++ +++ I + + Sbjct: 61 RNGKFNRQVELVTRGF-VYNKDAESLLSETKKLVRTELINMENEGIKEIGKIKQKIRAKV 119 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L K ++P++ I ++ Sbjct: 120 GEFLNKETDREPIILPIIMEV 140 >gi|73956499|ref|XP_856157.1| PREDICTED: similar to related to CPSF subunits 68 kDa isoform 1 isoform 5 [Canis familiaris] Length = 621 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 69/480 (14%), Positives = 139/480 (28%), Gaps = 85/480 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER------ 113 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 114 ----------VSKKIPCISFQAGDK------VDVGAFSIESVRVNHSIPETM-ALVIRSP 156 + K V S+ S+P A + Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLHQTVQVRVPTDPISLCYCETTRSVPSAHQACGTSAV 174 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 + + A G G + + + R I+E Sbjct: 175 PQLCLSASERVCPPGAAGGRDWT----VRWPTRGEASWISAWIDKCRPNLLITESTYATT 230 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 I D + + + ++ ++ ++ + LG + + + + + Sbjct: 231 IRDSKRCRERDF--------LKKVHEAVERGGKVLIPVFALGRAQELCILLETFWERMNL 282 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL-------AEKDTVI 329 + T + + R Q + E +++K V+ Sbjct: 283 KAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVV 342 Query: 330 FSS-------------RAIPGNEVAIGHI----------------KNRLVEQGVRVIAED 360 F++ R GNE + + + +L +G +V+ Sbjct: 343 FATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVK 402 Query: 361 AE-CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + + S H + ++ P+ ++ +HGE + K+ QE NG Sbjct: 403 MQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 462 >gi|307110126|gb|EFN58363.1| hypothetical protein CHLNCDRAFT_142438 [Chlorella variabilis] Length = 709 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 63/439 (14%), Positives = 137/439 (31%), Gaps = 64/439 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LPLG E+G + + Y + +M+DCGV G+ P + Sbjct: 25 VQILPLGAGQEVGRSCIIVRYCGKT----VMLDCGV---HPGFFGI-ASLPFFD--EVDL 74 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK------ 117 + A+ +TH H DH A+ + V + ++ K Sbjct: 75 SEVDAMLVTHFHLDHCAAVPYVTGHTSFRGRVLMTHPTKAIVHTLLKDFVKVSKGGSGEG 134 Query: 118 -----------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 VD+ + + R H + ++ +++TGD+ Sbjct: 135 LYSERDLDAAMERTEVIDFHQTVDLDGIRVTAYRAGH-VLGAAMFMVEVGGMRLLYTGDY 193 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 D + + + ++ +ST + E+ ++ + I Sbjct: 194 SRIPDRHMPA-------ADLPAQRPHIVVVESTYGVSRHLPREERE-QRFVQRIHTAVAR 245 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 V ++ R + ++ I E+ G I +R +SV + + Sbjct: 246 GGRVLLPVVALGRAQELLLILEEYWERHPELHGVPIYQASGLARRAISVYKAYIEMMNED 305 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS------- 331 + + + + + + + + + + +SR ++ V+ + Sbjct: 306 IKRAFTVANPFEFKHISHLKSAAHFDD----SGMSRELFEAWCEDARNCVVIADFAVQGT 361 Query: 332 -SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 +R I GN + + GV+V + S H ++P +V Sbjct: 362 LARDILGNPSEV------MTRNGVKVPLRMQVDAISFSAHADFPQTSEFLDALQPPHVVL 415 Query: 391 IHGEPLHLVAHKELALQEG 409 +HGE + K+ Q Sbjct: 416 VHGEATEMGRLKKALEQHA 434 >gi|297837375|ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata] gi|297332410|gb|EFH62828.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata] Length = 693 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 143/465 (30%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + + + I+ DCG+ + P I Sbjct: 20 DQLIVTPLGAGSEVGRSCVYMSFRGKN----ILFDCGIHPAYSGM----AALPYFDEID- 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 ++ + ITH H DH +L + V+ + + + Sbjct: 71 -PSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVE 129 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + ++K + I V+V H + ++ I++TG Sbjct: 130 DMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGH-VLGAAMFMVDIAGVRILYTG 188 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST+ ++ I EK I+ + Sbjct: 189 DYSREEDRHL-------RAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGII 274 G VL+ F+ + R + ++ I ++ I K+ ++V + Sbjct: 242 QG-GRVLIPAFA--LGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILS 298 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + + + P + LSR + + Sbjct: 299 MNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDK 358 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ I + G NE + N L + + S H Sbjct: 359 KNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHY-----ISFSAHADYAQTS 413 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + ++L + + Sbjct: 414 TFLKELMPPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNC 458 >gi|161529047|ref|YP_001582873.1| beta-lactamase domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340348|gb|ABX13435.1| beta-lactamase domain protein [Nitrosopumilus maritimus SCM1] Length = 421 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 82/427 (19%), Positives = 157/427 (36%), Gaps = 58/427 (13%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+G + G+ + +++D GV F + P P + + K+L A Sbjct: 6 LGAANEVGRS----GFLVNCNGTNLLLDYGVLFGRRGTP------PQYP-LHVKPKDLDA 54 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFA----IGLLEAKRVYERVSKKI-------- 118 I ITHAH DH G + L+ + VYA+P L+E E+ S Sbjct: 55 IIITHAHLDHSGNVPSLFVSGNTDVYATPPTFDLSKLLIEDMLKIEKNSHPFDLPELNNM 114 Query: 119 --PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 K+ G + E H I +++ S + +TGD K + +L + Sbjct: 115 MRNAKEIGFKQKITKGNATFELRESGHVI-GGSTVLVESENKRLFYTGDIKTNGSRMLRE 173 Query: 177 VTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + + I L+ +ST A ++ SE + + ++M KG + + +FS Sbjct: 174 M-------DLDIGEIDLLITESTYAMTEQKPRKESEAELIEFANEVMDR-KGILFIPSFS 225 Query: 235 SSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFLS---------- 282 V R + I I +I++ G +LK + ++ ++F Sbjct: 226 --VERSQEIACILRNANFKHRIIMDGMALKVNEIMFKHPEYLRDPKIFSDAINRATSITE 283 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 E +VI+ +A+ L +++ +++ + S G Sbjct: 284 HSERKRAMEEPCVVISPAGMLVGGNAVFYL-----QHLAFDDRNGIALVSYQGDGTPGRK 338 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVA 400 ++ +G + SGH N+L M + I+ P+ ++ +HG+ Sbjct: 339 LLETGKVSSRGKDINVTAQVKQFEFSGHADRNELFDMIKKIKGNPK-VLTVHGDSESCDL 397 Query: 401 HKELALQ 407 + + Sbjct: 398 FAQEIHE 404 >gi|312136618|ref|YP_004003955.1| kh-domain/beta-lactamase-domain protein [Methanothermus fervidus DSM 2088] gi|311224337|gb|ADP77193.1| KH-domain/beta-lactamase-domain protein [Methanothermus fervidus DSM 2088] Length = 650 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 41/273 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ LGG E+G + + I++DCGV+ +D +P + Sbjct: 191 ENDWARITALGGFREVGRSCLYL----QTPNSKILLDCGVNVAANDE---KNAYPYLNIP 243 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA-----------IGLLEAKR 109 + A+ I+HAH DH G + L+ + PVY S I + E + Sbjct: 244 EFILDEIEAVVISHAHLDHSGFVPYLYHYGYRGPVYCSAPTRDLMALLQLDHIDIAEREG 303 Query: 110 VYERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + K + ++ G + H + + I N+V Sbjct: 304 RELPFNAKDVNKCLKHTITLEYGEVTDITPDIRLTLHNAGHILGSAILHLHIGDGQHNLV 363 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 +TGD+K + +L VTD L L+ +ST +E S + +K + + Sbjct: 364 YTGDFKYEKTRLLEPAVTDFPRLE--------TLVMESTYGGKEDIQPSREMAEKRLIKV 415 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + G VL+ F+ V R + ++ + ++ Sbjct: 416 IYDTIKRGGKVLIPVFA--VGRAQELMVVLDEY 446 >gi|332159620|ref|YP_004424899.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2] gi|331035083|gb|AEC52895.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2] Length = 651 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 79/475 (16%), Positives = 162/475 (34%), Gaps = 80/475 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D G++ P P D P Sbjct: 185 KSRWIRITGLGGFREVGRSALLV----QTDESFVLVDFGINVAALNDPYKAFPHFDA--P 238 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFA---IGLLEAKRVY 111 + +++ L AI ITHAH DH G L L+ + P+Y +P + LL+ + Sbjct: 239 EFQYVL-REGLLDAIIITHAHLDHSGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIE 297 Query: 112 ERVSKKI--------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRS 155 + S I+ G+ D+ + H + + I + Sbjct: 298 IQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGN 357 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + L+ +ST + + +K Sbjct: 358 GLHNIAITGDFKFIPTRLLEPAN--ARFPRL-----ETLVMESTYGGSNDIQMPREEAEK 410 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVV 265 + +++ G VL+ + V R + ++ + E+ G + + + + Sbjct: 411 RLIEVIHKTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIDVPIYLDGMIWEATAI 468 Query: 266 SVAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG 315 A + ++ + + E + + RE+ +I + ++ L G Sbjct: 469 HTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGG 528 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECP 364 + + K+++IF S G + V + + Sbjct: 529 PSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGAREIPMIGEEGRTEVIKVNMEVYTI 588 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L ++P+ ++ +HGEP HK+ + Sbjct: 589 DGFSGHADRRELMNYVAKVKPRPERVITVHGEPQKCLDLATSIHKKFGISTRAPN 643 >gi|116494491|ref|YP_806225.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|116104641|gb|ABJ69783.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei ATCC 334] Length = 413 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 69/415 (16%), Positives = 141/415 (33%), Gaps = 48/415 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSNETVSSAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ ++ AIFI+H H DH GAL L +P+Y S + L + Sbjct: 56 ELFFDQPDVYTHEAIFISHLHIDHMGALQYLKK--PIPIYLSEPSYKLYQLLIKLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 + +G ++ +H P MAL++ H+GD +L+ Sbjct: 114 VANLHPLAYEQPLTIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAKRV 173 Query: 176 ----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI---SEKGIKKNIYDIMKNAKGCV 228 +++ L EG + + +E ++K ++ + V Sbjct: 174 HAWAKRFNQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ + + R+ S A GR++V V++ D +S Sbjct: 234 VINPYIRNYERLASFQASAHTAGRQLVWEPDDAA-VLTTMTDQKPDAILGQTISLTDIAR 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-RAIPGNEVAIGHIKN 347 P+ ++ L +L+ T I S+ + + +K+ Sbjct: 293 DPQHYVL-------QNSFDHLERLTD--------MPITTYIHSNGEPLGDYDPRFAQLKD 337 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + ++ SGH DL + + + P+ +V H A Sbjct: 338 WLEAHHIPLQF------MNASGHASREDLITLAKEVNPRTIVPWHSFHPEREAEA 386 >gi|239631250|ref|ZP_04674281.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525715|gb|EEQ64716.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 413 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 69/415 (16%), Positives = 141/415 (33%), Gaps = 48/415 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSNETVSSAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ ++ AIFI+H H DH GAL L +P+Y S + L + Sbjct: 56 ELFFDQPDVYTHEAIFISHLHIDHMGALQYLKK--PIPIYLSEPSYKLYQLLIKLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 + +G ++ +H P MAL++ H+GD +L+ Sbjct: 114 VANLHPLAYEQPITIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERV 173 Query: 176 ----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI---SEKGIKKNIYDIMKNAKGCV 228 +++ L EG + + +E ++K ++ + V Sbjct: 174 HAWAKRFNQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPALV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ + + R+ S A GR++V V++ D +S Sbjct: 234 VINPYIRNYERLASFQASAHTAGRQLVWEPDDAA-VLTTMTDQKPDAILGQTISLTDIAR 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-RAIPGNEVAIGHIKN 347 P+ ++ L +L+ T I S+ + + +K+ Sbjct: 293 DPQHYVL-------QNSFDHLERLTD--------MPITTYIHSNGEPLGDYDPRFAQLKD 337 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + ++ SGH DL + + + P+ +V H A Sbjct: 338 WLEAHHIPLQF------MNASGHASREDLITLAKEVNPRTIVPWHSFHPEREAEA 386 >gi|258539197|ref|YP_003173696.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus Lc 705] gi|257150873|emb|CAR89845.1| Hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] Length = 442 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 69/462 (14%), Positives = 157/462 (33%), Gaps = 53/462 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSHETVASAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ + AIFI+H H DH GAL L ++P+Y S + L + Sbjct: 56 ELFFDQPDSFANEAIFISHLHIDHMGALQYLQK--NIPIYLSEPSYRLYQVLIRLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + +G ++ +H P MAL+I H+GD +L+ Sbjct: 114 VANLHPLAFESPLAIGDLTVTGFHSDHDEPGVMALLIDDGARRFAHSGDVRLNGPHADRV 173 Query: 177 VTDKDSLCAIGNEGILALMCDSTNA-----------MREGTCISEKGIKKNIYDIMKNAK 225 A E I + + T+ ++E ++ ++ ++ Sbjct: 174 HAWASRFNA---EKISLFLLEGTSFSFDTPTPVEDQDHPSVPLTEMSLQTKFRQLLTDSS 230 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V++ ++ + R+ + A GR++V + +++ + + Sbjct: 231 QLVVINPYNRNYERMAAFQVSAHASGRQVVWEPNEAA-ILTAMTNQQPDAILGKTIQLTD 289 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 P++ ++ + L +L+ + + + + + + Sbjct: 290 LAQAPQQYVL-------QNSYAHLERLADLPISAYVHSNGE-------PLGDYDPRFAQL 335 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELA 405 K+ L + + + ++ SGH DL + + + P+V+V H A Sbjct: 336 KDWLADHQIPLQF------MNASGHATREDLITLAKEVNPRVIVPWHSFHPEREAEAMTR 389 Query: 406 LQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLI 447 Q + P M + + + I + + D + Sbjct: 390 KQMQMLS-YPNVIFIMTSMRSEKMMIDLSKKQAIHVVDVDSL 430 >gi|76800987|ref|YP_325995.1| mRNA cleavage and polyadenylation specificity factor-like protein [Natronomonas pharaonis DSM 2160] gi|76556852|emb|CAI48426.1| mRNA cleavage and polyadenylation specificity factor homolog [Natronomonas pharaonis DSM 2160] Length = 412 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 130/417 (31%), Gaps = 86/417 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LGG GEIG + L +++D G+ V V PD Sbjct: 1 MELQF--LGGAGEIGRSAVLV-------NGSLLLDYGIQTATPPQYPVGDVEPD------ 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIG----LLEAKRVYERVSKKI 118 A+ ++H H DH GA+ L S P++ +P L S + Sbjct: 46 ------AVVVSHGHLDHAGAVPSLLSGDRRPPIHWTPPTRELALTLARDTLKLHGGSYRC 99 Query: 119 PCIS------------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P + + + H IP + +++ +++TGD+ Sbjct: 100 PFTETAVKRVTQVSESHGYRESFEAAGHEVTLFDAGH-IPGSAHVLVDDGETRLLYTGDF 158 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 DD ++ + ++C+ST A + ++ +K Sbjct: 159 HTDDQRLVAGTS--------ARPDADVVVCESTYADVDH--DPRADVEDRFAQSVKTTLW 208 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID--VGIIKKDQLFL 281 G V+V F+ + R + ++ + E + G + + V+ + G ++ D+ F Sbjct: 209 EGGTVVVPAFA--IGRTQEMLLVCEAHDIPCYVDG--MGKQVTEMLRGYPGFVRDDEAFR 264 Query: 282 -----------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 D E ++ T A+ + ++ + V Sbjct: 265 RAKSHARFVTGRDGQRKRIAEENAAIVTTSGMLSGGPAMTYI-----PEIRAHPTNMVAL 319 Query: 331 SSRAIPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 + + G E I R++ ++ D S H L Sbjct: 320 TGYQVEGTPGRRLVETGRAEIDGRVMPVSAQIEQYD------FSAHADREGLVSFLD 370 >gi|227535538|ref|ZP_03965587.1| possible beta-lactamase exonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186860|gb|EEI66927.1| possible beta-lactamase exonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 413 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 140/415 (33%), Gaps = 48/415 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSNETVSSAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ ++ AIFI+H H DH GAL L +P+Y S + L + Sbjct: 56 ELFFDQPDVYTHEAIFISHLHIDHMGALQYLKK--PIPIYLSEPSYKLYQLLIKLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 + +G ++ +H P MAL++ H+GD +L+ Sbjct: 114 VANLHPLAYEQPITIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERV 173 Query: 176 ----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI---SEKGIKKNIYDIMKNAKGCV 228 +++ L EG + + +E ++K ++ + V Sbjct: 174 HAWAKRFNQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ + + R+ A GR++V V++ D +S Sbjct: 234 VINPYIRNYERLAGFQASAHTAGRQLVWEPDDAA-VLTTMTDQKPDAILGQTISLTDIAR 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-RAIPGNEVAIGHIKN 347 P+ ++ L +L+ T I S+ + + +K+ Sbjct: 293 DPQHYVL-------QNSFDHLERLTD--------MPITTYIHSNGEPLGDYDPRFAQLKD 337 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + ++ SGH DL + + + P+ +V H A Sbjct: 338 WLEAHHIPLQF------MNASGHASREDLITLAKEVNPRTIVPWHSFHPEREAEA 386 >gi|193786492|dbj|BAG51775.1| unnamed protein product [Homo sapiens] Length = 606 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 71/461 (15%), Positives = 142/461 (30%), Gaps = 81/461 (17%) Query: 12 GGVGE-IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KN 67 GG G+ +G + L + +M+DCG+ +D D FPD ++I + Sbjct: 15 GGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQNGRLTDF 66 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKIPC 120 L + I+H H DH GAL P+Y + + R + Sbjct: 67 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 126 Query: 121 ISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWK 167 + Q ++ + + I+ ++V+TGD+ Sbjct: 127 FTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 186 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAK 225 + D LG I L+ +ST A R+ E+ K +++ ++ Sbjct: 187 MTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG- 238 Query: 226 GCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G VL+ F+ + R + + + I ++ ++ Sbjct: 239 GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKI 296 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAI 335 + ++ + + P + V S R Sbjct: 297 RKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKW 346 Query: 336 PGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKR 378 GNE + + + +L +G +V+ + + S H + + Sbjct: 347 AGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQ 406 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + P+ ++ +HGE + K+ QE NG Sbjct: 407 LVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPVNG 447 >gi|145350779|ref|XP_001419775.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580007|gb|ABO98068.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 767 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 76/524 (14%), Positives = 165/524 (31%), Gaps = 78/524 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV--FPDITFI 61 + L +PLG E+G + + Y +K +M DCG+ PG + P I Sbjct: 10 DLLEIIPLGAGSEVGRSCVIARY----KQKTLMFDCGI------HPGYAGLASLPYFDEI 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL-------------- 105 ++ A+F+TH H DH A+ L + ++ + + Sbjct: 60 D--LADVDALFVTHFHLDHCAAVPFLCGRTDFNGRIFMTHPTKAIYHMLMQDFCRLLKNQ 117 Query: 106 ---EAKRVYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 E + + + I +VDV + R H + + ++ Sbjct: 118 EPSEQLFGEKDLEASMKKIEVIDFHQEVDVDGVKVTPYRAGH-VLGACMFNVDIGGLRVL 176 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ D L + ++ +ST + + E+ I+ + Sbjct: 177 YTGDYSRIADRHLPA-------ADVPAIPPHVVIVESTYGVSPHSPREEREIR-FTEKVQ 228 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGI 273 + V ++ R + ++ I E I + ++ +++ Sbjct: 229 TILRRGGRVLLPVVALGRAQELLLILEDFWAQNPDLQRVPIYQASALARKAMTIYQTYIN 288 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQ----------GEPRSALAQLSRGEMRNVKLA 323 + + + E + + ++ S+ P + LSR + Sbjct: 289 VLNSDMKAAFEEANPFVFNHVKHVSKSSELDDVGPCVVLATPSMLQSGLSRELFESWCED 348 Query: 324 EKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ VI + A+ G I N+++ + R + + + S H + Sbjct: 349 PKNGVIIADFAVQGTLAREILSDVNKIIARDGRELQLNMSVDAISFSAHADYPQTQAFLD 408 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 + P ++ +HGE + K + + KM P + ++ + G + Sbjct: 409 ALAPPHVILVHGEAGEMGRLKR-----ALDNKAAADDKKMSVYTPKNCQPVEIIHKGERI 463 Query: 442 KDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH-YNIFGVPE 484 + ++ G VL+ + PE Sbjct: 464 AKITGLLAEQEI---------EEGDHVAGVLVQKDFGTMLIAPE 498 >gi|158256210|dbj|BAF84076.1| unnamed protein product [Homo sapiens] Length = 606 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 71/461 (15%), Positives = 142/461 (30%), Gaps = 81/461 (17%) Query: 12 GGVGE-IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KN 67 GG G+ +G + L + +M+DCG+ +D D FPD ++I + Sbjct: 15 GGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQNGRLTDF 66 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKIPC 120 L + I+H H DH GAL P+Y + + R + Sbjct: 67 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 126 Query: 121 ISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWK 167 + Q ++ + + I+ ++V+TGD+ Sbjct: 127 FTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 186 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAK 225 + D LG I L+ +ST A R+ E+ K +++ ++ Sbjct: 187 MTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG- 238 Query: 226 GCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G VL+ F+ + R + + + I ++ ++ Sbjct: 239 GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKI 296 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAI 335 + ++ + + P + V S R Sbjct: 297 RKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKW 346 Query: 336 PGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKR 378 GNE + + + +L +G +V+ + + S H + + Sbjct: 347 AGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQ 406 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + P+ ++ +HGE + K+ QE NG Sbjct: 407 LVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVDCYMPANG 447 >gi|21226797|ref|NP_632719.1| cleavage and polyadenylation specificity factor 100 kD subunit [Methanosarcina mazei Go1] gi|20905093|gb|AAM30391.1| cleavage and polyadenylation specificity factor 100 kD subunit [Methanosarcina mazei Go1] Length = 637 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 36/270 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCGV+ D+ L P++ + Sbjct: 177 KDQWVRVTALGGCKEVGRSCFLL----STPESRILIDCGVNVGSDENMTPYLYVPEVFPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EA 107 + A+ +THAH DH G + L+ + PVY +P L+ E Sbjct: 233 ----NQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEG 288 Query: 108 KRV--YERVSKKI--PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 K++ + K I + D+ + H + ++ I + N+V Sbjct: 289 KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + + ++ ++T + K +K++ ++ Sbjct: 349 FTGDYKYEKTRLFDPAVN--KFPR-----VETVISEATYGNANAFQPALKDAEKHLQMVV 401 Query: 222 KNAKGCVLVTTFSS-SVSRIRSIIDIAEQI 250 KN + + +V R + ++ + E+ Sbjct: 402 KNTIERGGIAVIPAFAVGRSQEVMIVLEES 431 >gi|301066006|ref|YP_003788029.1| putative hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] gi|300438413|gb|ADK18179.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] Length = 413 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 69/415 (16%), Positives = 141/415 (33%), Gaps = 48/415 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSNETVSSAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ ++ AIFI+H H DH GAL L +P+Y S + L + Sbjct: 56 ELFFDQPDVYTHEAIFISHLHIDHMGALQYLKK--PIPIYLSEPSYKLYQLLIKLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 + +G ++ +H P MAL++ H+GD +L+ Sbjct: 114 VANLHPLAYEQPLTIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERV 173 Query: 176 ----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI---SEKGIKKNIYDIMKNAKGCV 228 +++ L EG + + +E ++K ++ + V Sbjct: 174 HAWAKRFNQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ + + R+ S A GR++V V++ D +S Sbjct: 234 VINPYIRNYERLSSFQASAHTAGRQLVWEPDDAA-VLTTMTDQKPDAILGQTISLTDIAR 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS-RAIPGNEVAIGHIKN 347 P+ ++ L +L+ T I S+ + + +K+ Sbjct: 293 DPQHYVL-------QNSFDHLERLTD--------MPITTYIHSNGEPLGDYDPRFAQLKD 337 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + ++ SGH DL + + + P+ +V H A Sbjct: 338 WLEAHHIPLQF------MNASGHASREDLITLAKEVNPRTIVPWHSFHPEREAEA 386 >gi|118575218|ref|YP_874961.1| hydrolase of the metallo-beta-lactamase superfamily [Cenarchaeum symbiosum A] gi|118193739|gb|ABK76657.1| hydrolase of the metallo-beta-lactamase superfamily [Cenarchaeum symbiosum A] Length = 496 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 71/476 (14%), Positives = 160/476 (33%), Gaps = 103/476 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP----------DITFI 61 GG+ EIG N L + +D G+ + + + + P + + Sbjct: 8 GGIKEIGGNKILVE----DKGTRVFLDFGMQMGRANDYFAEFMKPRTLNGMGDLFEFDLL 63 Query: 62 MK-----ERK--------------NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 + + ++ A+ ++HAH DH + L +PVY + Sbjct: 64 PQLDGIYRKDYAKHMGLKHWDSETSVDAVLLSHAHVDHCAYIKYLRPE--IPVYCTEATK 121 Query: 103 GLL---------------EAKRVYERVS-------------KKIPCISFQAGDKVDVGAF 134 +L + + + + K + +K VG Sbjct: 122 MILQVFDDAGMGEEYITYKRNFGFHKKNGVGIKTIGKKRETKPRDIRLIKNLEKFKVGNI 181 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC-AIGNEGILA 193 +E + ++HS+P ++ + G + +T D + D G+E Sbjct: 182 EVEPIAIDHSLPGACGFLMHTSSGTLGYTADIRFHGRHPD----DSQKFVDRCGSEKPDC 237 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 L+C+ T + ++E I+ +M++ KG V+ + + R+ S + A+ GR Sbjct: 238 LLCEGTRIDVPKSDLTEIEIESKARTMMEDTKGLVVCSYPPRDLDRMLSFYNAAKAAGRV 297 Query: 254 IVLLGS--SLKRVVSVAIDVG-------------IIKKDQLFLSDESFGLYPREQLIVIA 298 + + L ++ + + + + + L D+ + ++ + Sbjct: 298 LAIDTRQAYLLKLFDESEECRGLFPSPKDPSIRVYLSRKKWGLIDKDPDYWTKKLVREDY 357 Query: 299 TGSQGEPRS-------------------ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 + E S + E+ +V+ E I SS E Sbjct: 358 KAWEHEFLSYDNAVDYRDISKKQNDYVFHCSDFKLQELIDVRPDEGSRYIRSSTEPFDEE 417 Query: 340 VAIGHI-KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + + R + + + +++ +HVSGH + +K + ++L+ IH Sbjct: 418 MELDQVRVKRWLGKFGLIGSDNKWETLHVSGHGTHDQIKGVIDGSASKMLIPIHTN 473 >gi|55378835|ref|YP_136685.1| mRNA 3'-end processing factor [Haloarcula marismortui ATCC 43049] gi|55231560|gb|AAV46979.1| mRNA 3'-end processing factor [Haloarcula marismortui ATCC 43049] Length = 411 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 60/418 (14%), Positives = 128/418 (30%), Gaps = 74/418 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG EIG + L + +++D G+ V PD A Sbjct: 6 LGGADEIGRSAVLI-------DESLLLDFGMLTDSPPQFPVRTPSPD------------A 46 Query: 71 IFITHAHEDHYGALHDLWS-FLHVPVYASPFA----IGLLEAKRVYERVSKKIPCISFQ- 124 + ++H H DH G + L S P++ +P + L + P Sbjct: 47 VVVSHGHLDHVGTIPALVSGDARPPIHWTPPTYELAMTLARDTLKLHGGTVNCPFTETNV 106 Query: 125 -----------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + + + H IP + +++ +++TGD+ DD + Sbjct: 107 RRVTQVSETHGYRESFEAAGYEVTFYNAGH-IPGSAHVLVDDGDTRLLYTGDFHTDDQRL 165 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + T A++C+ST + + E + + + V Sbjct: 166 VAGTT--------ARPDADAVICESTYSDVDH-DPRETVEGRFVESVETTLWEGGTVVVP 216 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGS------SLKRVVSVAIDVGIIKKDQLFL-----S 282 + ++ R + ++ + E + G L + D +++ + Sbjct: 217 AFAIGRTQEMLLVCEAHDIPCYVDGMGKQVTEMLGQYPEFVRDADALQRAKSHARFVTGK 276 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN---- 338 D ++ ++ T A+ + ++ + + + + G Sbjct: 277 DGQRKRITDQKAAIVTTSGMLSGGPAMTYI-----PEIRGNPMNKITMTGYQVEGTPGRD 331 Query: 339 --EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 E I R++ RV D S H + L R ++ HG+ Sbjct: 332 LLETGSAEIDGRIMPVSARVEQYD------FSAHADRDGLFAYLDSYRDTPVLVNHGD 383 >gi|308198432|pdb|2XR1|A Chain A, Dimeric Archaeal Cleavage And Polyadenylation Specificity Factor With N-Terminal Kh Domains (Kh-Cpsf) From Methanosarcina Mazei gi|308198433|pdb|2XR1|B Chain B, Dimeric Archaeal Cleavage And Polyadenylation Specificity Factor With N-Terminal Kh Domains (Kh-Cpsf) From Methanosarcina Mazei Length = 640 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 36/270 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCGV+ D+ L P++ + Sbjct: 180 KDQWVRVTALGGCKEVGRSCFLL----STPESRILIDCGVNVGSDENMTPYLYVPEVFPL 235 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EA 107 + A+ +THAH DH G + L+ + PVY +P L+ E Sbjct: 236 ----NQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEG 291 Query: 108 KRV--YERVSKKI--PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 K++ + K I + D+ + H + ++ I + N+V Sbjct: 292 KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + + ++ ++T + K +K++ ++ Sbjct: 352 FTGDYKYEKTRLFDPAVN--KFPR-----VETVISEATYGNANAFQPALKDAEKHLQMVV 404 Query: 222 KNAKGCVLVTTFSS-SVSRIRSIIDIAEQI 250 KN + + +V R + ++ + E+ Sbjct: 405 KNTIERGGIAVIPAFAVGRSQEVMIVLEES 434 >gi|298674377|ref|YP_003726127.1| KH-domain/beta-lactamase-domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298287365|gb|ADI73331.1| KH-domain/beta-lactamase-domain protein [Methanohalobium evestigatum Z-7303] Length = 638 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 76/451 (16%), Positives = 143/451 (31%), Gaps = 78/451 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + + + +MIDCGV+ D+ L P+ + Sbjct: 177 KDQWVRITSLGGCKEVGRSCFIL----STPESRVMIDCGVNIGSDENMTPYLYVPEAYPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 L A+ +THAH DH G + L+ + PVY + L ++ Sbjct: 233 ----SQLDAVILTHAHLDHSGFIPLLYKYGYQGPVYCTLPTRDLSALLQLDYIDVAGKEG 288 Query: 113 RVSKKIPCISFQAGDKVDVGAF----------SIESVRVNHSIPETMAL-VIRSPVGNIV 161 R+ +A F + H + +A I + N+V Sbjct: 289 RIVPYESSQVREALKHTITLDFEEVTDIAPDIKLTFHNSGHILGSAIAHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + ++ +ST + K +K++ ++ Sbjct: 349 FTGDYKYGSTRLFDPAVN--KFPR-----VETVVTESTYGSSNAVQPTLKDAEKHLQQVI 401 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS------------ 259 N G VL+ F+ V R + ++ + E I L G Sbjct: 402 INTLQKDGIVLIPAFA--VGRSQEVMIVLEDAIRKGLIDDVPIYLDGMIWEATAIHATYP 459 Query: 260 -----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATGSQGEPRSALAQ 311 L++ + + + ++ +++AT L Sbjct: 460 EYLNNELRKSIFQKGQNPFLSDSFKPVDSNELRQKIIDEPHPCVILATAGMMNAGPILEY 519 Query: 312 L----SRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKN-RLVEQGVRVIAEDAECPV 365 S V + + R G E+ + N V + E + Sbjct: 520 FKAFASNENNTLVFVGYQADGTLGRRIQKGWKEIPMSSSVNGGTQTINVNMNVEVVDG-- 577 Query: 366 HVSGHPYPNDLKRMYQWIRPQ--VLVAIHGE 394 SGH L + ++P+ + HGE Sbjct: 578 -FSGHSDRKQLMDFVKKMKPRPERVYTEHGE 607 >gi|145590331|ref|YP_001152333.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282099|gb|ABP49681.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 635 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 86/489 (17%), Positives = 159/489 (32%), Gaps = 89/489 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDI 58 +K + LG E+G + L ++ +++DCG+ +D P +DLV DI Sbjct: 170 LKEGPITVTFLGAAMEVGRSAILV----STTESNVLLDCGLKPSQYDEDFPMLDLV--DI 223 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAI--------GLLEAKR 109 L A+ +THAH DH G L L+ + PVY + +E K Sbjct: 224 -------DRLDAVVLTHAHMDHVGCLPFLFKYGYKGPVYMTDPTKYQAFILLTDYVELKE 276 Query: 110 VYERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVG 158 I+ + D+ + H I MA I + Sbjct: 277 REGLQPSFSKADVEAVIYHTITLDYEEVTDIAPDIKLTFYDAGHEIGSAMAHLHIGNGRY 336 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 NI++TGD+K +L + L+ +ST ++ + + Sbjct: 337 NILYTGDFKYGKTRLLNRA--VSKFKR-----VEMLIMESTYGGKDDVQPPRHEAENALA 389 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA 268 + G VL+ FS+ R + I+ I ++ I + G ++ + Sbjct: 390 KHISETVSKGGKVLIPAFST--GRGQEILYILNKMMDGGLVPRVPIYVDGMIVETLNVYL 447 Query: 269 IDVGIIKKDQLF-----------------LSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 + + + + Q+ IA + A Sbjct: 448 MYPHYLNPEVAEEIYGGVNPFTTSGNVVIVDRAKRVEDRINQVAKIAQSEEPAIIIAPHG 507 Query: 312 LSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV---------I 357 + G + +K+ ++F S G I N E VR + Sbjct: 508 MLNGGPVLDYFAQLAPDDKNKLVFVSYQAEG--TIGRRILNGEREFVVRSLVGGESKINM 565 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + SGH +L + + I +P+ + IHGEP +++ + Sbjct: 566 RMEVVSIPGFSGHSDRRELMKYVEHIEPKPKKIALIHGEPSKIISLATSIELKYKITTVI 625 Query: 416 VRNGKMLRL 424 + G+ +R+ Sbjct: 626 PKVGERIRV 634 >gi|320583131|gb|EFW97347.1| Putative endoribonuclease [Pichia angusta DL-1] Length = 702 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 64/449 (14%), Positives = 138/449 (30%), Gaps = 76/449 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPK-DDLPGVDLVFPDIT 59 +EEL F LGG E+G + + Y K +M+D GV +F + LP D D Sbjct: 2 SEELNFYCLGGGNEVGRSCHIVEY----KGKVVMLDAGVHPAFSGAESLPFYD----DFD 53 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 54 -----LSKVDVLLISHFHLDHAASLPYVMQHTNFKGRVFMTYPTKAIYKWLLNDFVRVTS 108 Query: 111 ---------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 E +++ + I ++V + H + + Sbjct: 109 IADDNDENSANFLYTDEDLNESLDRIETIDYHSTIEVEGIRFTAYHAGH-VLGAAMFFVE 167 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 + TGD+ ++D L + L+ +ST E+ K Sbjct: 168 LGGLKFLFTGDYSREEDRHLSS-------AELPPSRPDLLITESTFGTATHVPRVEREAK 220 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVV 265 ++ G L+ F+ + R + I+ I ++ I K+ + Sbjct: 221 LTHVIHSTIQQGGRCLLPVFA--LGRAQEILLILDEYWQNNPELQNVPIYYASDLAKKCM 278 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE------------PRSALAQLS 313 +V + D + P + + + P +S Sbjct: 279 AVYQRYVNMMNDSIRKKFTETNQNPFHFKYIKNITNIEKINDLDSSVLIASPGMLQNGIS 338 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI----KNRLVEQGVRVIAEDAECPVHVSG 369 R + +++ I + ++ G I ++ V + + + + Sbjct: 339 RKILEKWSPDPRNSCILTGYSVEGTMAKILLTEPSEIPSIINPDVMIPRKINIEEISFAA 398 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 H + + + P+ ++ +HGE + Sbjct: 399 HVDYEQNSKFIELVNPKAIILVHGETNQM 427 >gi|300706475|ref|XP_002995499.1| hypothetical protein NCER_101581 [Nosema ceranae BRL01] gi|239604633|gb|EEQ81828.1| hypothetical protein NCER_101581 [Nosema ceranae BRL01] Length = 671 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 76/495 (15%), Positives = 151/495 (30%), Gaps = 77/495 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ PLG E+G + L Y + K IM DCGV G+ P + + Sbjct: 29 NKIKVKPLGAGNEVGRSCILISY----NNKNIMFDCGV---HSAHTGI-ASLPFLDTVD- 79 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + A FITH H DH L L V+ + +L Sbjct: 80 -LSTVDACFITHFHLDHAAGLPYLTEKTNFKGKVFMTHPTKAILRWMLNDYVRIINASSD 138 Query: 110 -----VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + I ++++ + + H + +I+ +++TG Sbjct: 139 VDFYTEKDLNNCYNKIIPIDYHQEINIEGIKVIGLNAGH-VLGAAMFLIKIEDSVMLYTG 197 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L N I AL+ +ST ++ E+ + I K Sbjct: 198 DYSREEDRHL-------KAAESPNCKIHALITESTYGVQCHLSRDERE-SRFTSTITKIV 249 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR----VVSVAIDVGI 273 ++ R + ++ I ++ + S+L + + I++ Sbjct: 250 TRGGRCLLPVFALGRAQELLLILDEHWSNNPQLHSIPIYYASALAKKCIGIYQTYINMMN 309 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-------LSRGEMRNVKLAEKD 326 + L F + L I P +A LSR ++ Sbjct: 310 DHIKKSSLIKNPFAFQYVKNLKSIDFFEDNSPCVIMASPGMLQSGLSRELFEKWCGDRRN 369 Query: 327 TVIFSSRAIPG-------NE-VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 VI ++ G NE + +K +++ + V + S H + Sbjct: 370 GVIIPGYSVDGTLAKEILNEPKEVMSMKGNVLKLNMSVDY------ISFSAHVDFAQNVQ 423 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHG 438 +P L +HGE + K + Q + + ++ + Sbjct: 424 FIDECQPDHLFFVHGEANEMNRLKNVIAQRNEKKNVQMELYTLRNCEEGSFDVKKK---- 479 Query: 439 LFLKDGFLIGKFADL 453 + ++G Sbjct: 480 ---TEASIVGDIEGE 491 >gi|199597289|ref|ZP_03210720.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] gi|199591805|gb|EDY99880.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] Length = 414 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 63/414 (15%), Positives = 144/414 (34%), Gaps = 46/414 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSHETVASAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ + AIFI+H H DH GAL L ++P+Y S + L + Sbjct: 56 ELFFDQPDSFANEAIFISHLHIDHMGALQYLQK--NIPIYLSEPSYRLYQVLIRLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + +G ++ +H P MAL+I H+GD +L+ Sbjct: 114 VSNLHPLAFESPLAIGDLTVTGFHSDHDEPGVMALLIDDGARRFAHSGDVRLNGPHADRV 173 Query: 177 V-----TDKDSLCAIGNEGILALMCDSTNAM---REGTCISEKGIKKNIYDIMKNAKGCV 228 + + + EG T ++E ++ ++ ++ V Sbjct: 174 HAWASRFNAEKISLFMLEGTSFSFDTPTPVEDQDHPSVPLTEMSLQTKFRQLLTDSPQLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ ++ + R+ + A GR++V + +++ + + Sbjct: 234 VINPYNRNYERMAAFQASAHASGRQLVWEPNEAA-ILTAMTNQQPDAILGKTIQLTDLAQ 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 P++ ++ + L +L+ + + + + + +K+ Sbjct: 293 APQQYVL-------QNSYAHLERLADLPISAYVHSNGE-------PLGDYDPRFAQLKDW 338 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + + ++ SGH DL + + + P+V+V H A Sbjct: 339 LADHQIPLQF------MNASGHATREDLITLAKEVNPRVIVPWHSFHPEREAEA 386 >gi|297527561|ref|YP_003669585.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] gi|297256477|gb|ADI32686.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] Length = 427 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 85/432 (19%), Positives = 146/432 (33%), Gaps = 49/432 (11%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G L K ++D GV+F ++D P FP + L Sbjct: 7 LGGGNEVGRAAYLI----VDDNKKFLLDYGVNFDEEDHP----QFP----LHVRPIELSG 54 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIPCISFQ 124 + ITHAH DH GA L+ V+ + + + + K + I Sbjct: 55 LAITHAHLDHIGAAPLLYITGKPRVFVTKPTLDIGKLLISDFLKLNAYYIDYSIEEFEAM 114 Query: 125 AGDKVDV--------GAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILG 175 A + + F I + H I + + + +P I++TGD L Sbjct: 115 ASNAYLLEYGVEVENDGFKIIATNAGH-ILGSAMIYLETPSGHRILYTGDVNTIQTWTLS 173 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + I L+ +ST SEK + I ++ NA G VL+ F Sbjct: 174 R-------AELWPLKIDTLIIESTYGSTKHPPRHYSEKRLVDAIEEVT-NAGGTVLIPAF 225 Query: 234 SSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S V R + ++ + + + L G S + ++ LF + R Sbjct: 226 S--VGRSQEVMCLVQAELPHLDVYLDGMSREITNIYLKHKRFLRDPSLFEKAVQNTFFIR 283 Query: 292 EQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 + + A + +G ++ + K+ V S P + K Sbjct: 284 GWHDRRKAWKKPGVIISSAGMLKGGPSVYYLKKIAKEPKNAVFLVSYQAPNTPGHVLLEK 343 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKEL 404 E G+ + +S H + L + Q + + L+ IHGEP + Sbjct: 344 GIYEEFGLDEPIKARLEWFDLSSHAGKDGLISIIQRYKNTLKNLIIIHGEPDSASNLASM 403 Query: 405 ALQEGIACVPPV 416 A++ V V Sbjct: 404 AVELLGNDVNIV 415 >gi|115456655|ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] gi|27573349|gb|AAO20067.1| putative cleavage and polyadenylation specifity factor protein [Oryza sativa Japonica Group] gi|29126360|gb|AAO66552.1| putative cleavage and polyadenylation specifity factor [Oryza sativa Japonica Group] gi|108712151|gb|ABF99946.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit, putative, expressed [Oryza sativa Japonica Group] gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza sativa Japonica Group] gi|125588676|gb|EAZ29340.1| hypothetical protein OsJ_13407 [Oryza sativa Japonica Group] Length = 700 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 61/467 (13%), Positives = 136/467 (29%), Gaps = 77/467 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + + + ++ DCG+ + P I Sbjct: 29 DQLIITPLGAGNEVGRSCVYMSF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 79 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + ITH H DH +L V+ + + Sbjct: 80 -PSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 138 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 139 DMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 197 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L + + +ST +++ + K D++ Sbjct: 198 DYSREEDRHL-------KAAELPQFSPDICIIESTYGVQQHQPRHVRE--KRFTDVIHTT 248 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKR 263 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 249 VSQGGRVLIPAFA--LGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAVYQTYIN 306 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 ++ I + + V + P + LSR Sbjct: 307 SMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTD 366 Query: 324 EKDTVIFSSRAIPG-------NEVAIGHIKNRL-VEQGVRVIAEDAECPVHVSGHPYPND 375 +K++ + + G NE + N L ++V + S H Sbjct: 367 KKNSCVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHY------ISFSAHADFPQ 420 Query: 376 LKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 ++P +V +HGE ++L Q + V Sbjct: 421 TSTFLDELQPPNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNC 467 >gi|313885694|ref|ZP_07819443.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619059|gb|EFR30499.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 444 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 141/447 (31%), Gaps = 79/447 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++ + G+ IG N+ + I+ D G+ D +DL + Sbjct: 1 MTETQVKVIA--GLDSIGGNIVVLE----KDNYQIVTDFGIIRGTTDSEALDLAM--TSD 52 Query: 61 IMKER-----------KNLMA--------------IFITHAHEDHYGALHDLWSFLHVPV 95 ++ + K L A I I+H H DH GAL L +PV Sbjct: 53 LVDRKGLPQLDGLYPQKQLKAKTVEAYETSQKQTIICISHLHLDHIGALLHLAPQ--IPV 110 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISF--QAGDKVDVGAFSIESVRVNHSIPETMALVI 153 Y S + +A + ++ G F I+ +H A+ I Sbjct: 111 YTSQESYDFYQA-LAQTGFLPDYQVNWQGVAYDEVLEHGPFKIQFKASDHDTKGIAAIFI 169 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC------ 207 SP ++H+GD++ + A E LAL+ +T + Sbjct: 170 ESPDLKVIHSGDFRY--SGFHPEKVFAWGQAARQFEADLALLEGTTFSFLPDPNQAPVPL 227 Query: 208 ------------ISEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDIAEQIGRKI 254 +E + KNI +++ V+ + ++ R+ + + Q+GR++ Sbjct: 228 EPWQEKIKVIESKTELSLLKNISQLLEANPQASVVFNGYEQNLERLLYLSQVLSQLGRQL 287 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 L + +S A G+ + P+ ++ + + +L Sbjct: 288 ALDEKYYQLALSFAKIYGLKYDNICLADLPLIKKKPQNYVLNLTYDH----YQDMFELPA 343 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 G + + P + + ++ + SGH YP Sbjct: 344 GLYLHSNGYPLGPYM------PAYQPFVLDLQ----------AHNWQMYQMGSSGHAYPQ 387 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAH 401 DL + +V V H L A Sbjct: 388 DLLNQAYLVNAKVTVPWHSSQPDLYAQ 414 >gi|119719363|ref|YP_919858.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119524483|gb|ABL77855.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 428 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 150/407 (36%), Gaps = 48/407 (11%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L LG E+G + L G K I++D GVS ++ P L P Sbjct: 5 MADVYLK--ALGAAREVGRSAILLG----VEGKLILLDYGVSIEGEE-PQFPLPVP---- 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI----GLLEA--KRVYERV 114 K + A+ I+HAH DH GA L+ P+ ++P L++ K + Sbjct: 54 ----PKGIHAVAISHAHLDHSGAAPLLYVSGQPPLISTPLTATLSDLLIKDFMKLSKYYI 109 Query: 115 SKKIPCISFQ--------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + P + G+ D+G+ +I + H IP + + I +P N+++TGD+ Sbjct: 110 PYEAPEVEKMLESLVPLGYGESYDIGSVTIRVLDAGH-IPGSAMIQIETPSLNVLYTGDY 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 L D +L + ++ +ST A + E+ ++ + +++ + Sbjct: 169 SLHDTCLLRG----AGISEFSK--ADVVIMESTYAEYDHP-PREEVEREFVKTVLEVVED 221 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR--VVSVAIDVGIIKKDQLFLSDE 284 + + +V R + I+ + + ++ + + R +A D ++++ LF Sbjct: 222 GGIAFIPAFAVGRAQEILCVLAKYDLQVPIYVDGMARTANDLIAEDSHLLREPSLFKKAV 281 Query: 285 SF----GLYPREQLIVIATGSQGEPRSALAQLSRGEMR-NVKLAEKDTVIFSSRAIPGNE 339 + + I+ G P L + EK+ VIF S IP E Sbjct: 282 EMSTKVKDWDHRKKILSKPGVIISPAGMLQGGPSEYYMEKIMENEKNAVIFVSYVIP--E 339 Query: 340 VAIGHIKNR--LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + R + S H ++L + + Sbjct: 340 TPARQVIETGIYASPTKRGPVKARIEWFDFSAHCGHSELVKTLDSAK 386 >gi|14591202|ref|NP_143278.1| mRNA 3'-end processing factor, putative [Pyrococcus horikoshii OT3] gi|294979445|pdb|3AF5|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404 From Pyrococcus Horikoshii gi|294979446|pdb|3AF6|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404 From Pyrococcus Horikoshii Complexed With Rna-Analog gi|3257827|dbj|BAA30510.1| 651aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 651 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 81/475 (17%), Positives = 165/475 (34%), Gaps = 80/475 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D GV+ P P D P Sbjct: 185 KSRWIRITGLGGFREVGRSALLV----QTDESFVLVDFGVNVAMLNDPYKAFPHFDA--P 238 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFA---IGLLEAKRVY 111 + +++ L AI ITHAH DH G L L+ + P+Y +P + LL+ + Sbjct: 239 EFQYVL-REGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIE 297 Query: 112 ERVSKKI--------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRS 155 + S I+ G+ D+ + H + + I + Sbjct: 298 IQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGN 357 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + L+ +ST + + +K Sbjct: 358 GLHNIAITGDFKFIPTRLLEPAN--AKFPRL-----ETLVMESTYGGANDIQMPREEAEK 410 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSSLK---RVV 265 + +++ N G VL+ + V R + ++ + E+ G ++ + + + Sbjct: 411 RLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWEATAI 468 Query: 266 SVAIDVGIIKKDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRG 315 A + ++ + + E + + RE+ +I + ++ L G Sbjct: 469 HTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGG 528 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECP 364 + + K+++IF S G + + V + + Sbjct: 529 PSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTI 588 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP H++ + Sbjct: 589 DGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGISTRAPN 643 >gi|16082538|ref|NP_394086.1| metal-dependent RNase [Thermoplasma acidophilum DSM 1728] Length = 639 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 82/460 (17%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD----LVFPDITF 60 + LGG E+G + L + ++IDCG+ D D L P++ Sbjct: 179 WVRLTALGGHSEVGRSATLV----STKNSKVLIDCGMMNVGPDADPWDAAPYLYVPEVQP 234 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRV 110 + + A+ +THAH DH G L L+ + PVY +P L A+ Sbjct: 235 L----STIDAVILTHAHLDHSGLLPLLFKYGYDGPVYMTPPTRDLAALLQNDYIKVARME 290 Query: 111 YERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNI 160 +V + I + + + + H + I + N+ Sbjct: 291 GGKVPYESKYIREELKHTITLRYGETTDITRDMRLTFYNAGHILGSASGHLHIGDGLYNV 350 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V +GD K + + +K M +ST R+ + + + + D+ Sbjct: 351 VLSGDVKFEKTWLFNPANNKFPRAE-------TFMTESTYGGRDDYSFTREEATQTLIDV 403 Query: 221 MKNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGSSLKRVVSVAID 270 + G VL+ F+ V R + ++ + A + G + L G ++ A Sbjct: 404 INRTHDRGGSVLIPVFA--VGRSQEVMIVLEDAMRNGRIPQMDVYLDGMIMEAPAIHAAY 461 Query: 271 VGIIKKD----------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----- 315 + K+ FLS + R+Q IA + A + + G Sbjct: 462 PEYLNKELREAIMVKKENPFLSPIFKKVETRDQREEIAENPETTIVLATSGMMNGGPVME 521 Query: 316 EMRNVKLAEKDTVIFSSRAIPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + K T++F G A + + + D E SG Sbjct: 522 YFKAWSADPKHTLVFVGYQADGTLGKKIQSGAQEITLSGEGKNVTYPVKMDVETAEGFSG 581 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + +P+ ++ HG+ L Q Sbjct: 582 HSTKKQLLAYIATMQPKPKKILVNHGDNGKTAEFARLVRQ 621 >gi|125546484|gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group] Length = 700 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 61/467 (13%), Positives = 136/467 (29%), Gaps = 77/467 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + + + ++ DCG+ + P I Sbjct: 29 DQLIITPLGAGNEVGRSCVYMSF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 79 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + ITH H DH +L V+ + + Sbjct: 80 -PSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 138 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 139 DMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 197 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L + + +ST +++ + K D++ Sbjct: 198 DYSREEDRHL-------KAAELPQFSPDICIIESTYGVQQHQPRHVRE--KRFTDVIHTT 248 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKR 263 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 249 VSQGGRVLIPAFA--LGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAVYQTYIN 306 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 ++ I + + V + P + LSR Sbjct: 307 SMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTD 366 Query: 324 EKDTVIFSSRAIPG-------NEVAIGHIKNRL-VEQGVRVIAEDAECPVHVSGHPYPND 375 +K++ + + G NE + N L ++V + S H Sbjct: 367 KKNSCVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHY------ISFSAHADFPQ 420 Query: 376 LKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 ++P +V +HGE ++L Q + V Sbjct: 421 TSTFLDELQPPNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNC 467 >gi|193084111|gb|ACF09778.1| beta-lactamase domain protein [uncultured marine crenarchaeote KM3-153-F8] Length = 422 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 146/443 (32%), Gaps = 66/443 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+G + L K I++D G+ + L + Sbjct: 1 MNITTLGASREVGRSAFLVEI----EDKKIILDFGIMVKRPTLF----------PLYTNP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K + A+ ++HAH DH GA+ + ++ VY + + + + + Sbjct: 47 KEVDAVILSHAHLDHSGAIPSFFVSNNIDVYCTSASADISKLLIDDFINLSNDVTKQYIP 106 Query: 126 GDK------------------VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 ++G I+ + H IP + +++I I +TGD Sbjct: 107 FQHLELKKMMDNIKRVELNQEFEIGNIKIKLINAGH-IPGSASIIIEGEGKRIAYTGDIN 165 Query: 168 L-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAK 225 D + G T+ L L+ +ST + + + + + + + Sbjct: 166 AQDSSLVQGADTNYGEL--------DLLITESTYGLNDHPERKDVENEFVSFAKEITDKG 217 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 G +LV F+ V R + I + + G +LK + ++ +K + FL Sbjct: 218 GTLLVPAFA--VGRSQEIACTLNDHNFSKPVAMDGMALKTNEILKNNLECLKDSKAFLKT 275 Query: 284 ESF----GLYPREQLIVIATGSQGEPRSALAQLSRGEMRN-VKLAEKDTVIFSSRAIPGN 338 + + + ++ P + ++ + + +K+ + S + G Sbjct: 276 LDELMIVKNWKQRKELLRTPSVIIAPAGMMVGGLSSFYKDGIIMDKKNAISLVSFQVEGT 335 Query: 339 ------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVA 390 E + I N+L + + + S H +L M I+ P ++ Sbjct: 336 PGRMLLEKKMIRINNKLKKIKGKFEH------FNFSSHSGNKELFEMISRIKGEPTIVAV 389 Query: 391 IHGEPLHLVAHKELALQEGIACV 413 E L + + G + Sbjct: 390 HGEEEQSLGFANAIKEKYGYEAI 412 >gi|281419903|ref|ZP_06250902.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] gi|281406030|gb|EFB36710.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] Length = 425 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 76/431 (17%), Positives = 146/431 (33%), Gaps = 57/431 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGVDLVFPD 57 +K+ ++V G+ +IG + + + +D G + P P D Sbjct: 10 LKDNDVVVTIHRGIDQIGGCITEI----STKTSRVFVDFGQNLPGCTVPTTPEQDKALVR 65 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 + K A+ THAHEDH G L DL VP Y L+ AK +++ + Sbjct: 66 -DIFAQNVKQHQAVVYTHAHEDHVG-LFDLIP-CDVPQYLGVGGQELMLAKYDLLKIAHE 122 Query: 118 IPCISFQAGDKV-----------------------------DVGAFSIESVRVNHSIPET 148 + K+ +G I +HSI ++ Sbjct: 123 QEWKDSEEKSKILIDDEQKISKIKDFHVWERTAPHTRPKSFMIGDIRITPFFNSHSIYDS 182 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +I + I HTGD++ G + I L+ + T R CI Sbjct: 183 YMFLIEADGKRIWHTGDYRDHAYLGKGLYPTLHRYAS----NIDLLITEGTTLKRGDLCI 238 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV- 267 E + + + +M K V+V ++ + R+ S+ A + + + G + R + + Sbjct: 239 QESEVSRRMACVMSAFK-YVIVLVSATDIERLASVKTAALKARKGLYYTGGMMGRAMRIF 297 Query: 268 ----AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 A + E Q + + ++ +G + Sbjct: 298 THREAKSSKGLFAFHFKYVGEDDPKLGEMQKKGFVLVTGASHLDFVKKMCQG-----LSS 352 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 + +I+S+ G +K + R + +H SGH +K++ + Sbjct: 353 SEVLLIYSAWD--GYYKDPLQVKQNPAYRDFREAFPNVV-DIHTSGHASRECIKKVIDIV 409 Query: 384 RPQVLVAIHGE 394 +P+ ++ IH E Sbjct: 410 KPKEVICIHKE 420 >gi|222480208|ref|YP_002566445.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453110|gb|ACM57375.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 414 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 62/417 (14%), Positives = 127/417 (30%), Gaps = 68/417 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + L ++ID G+ + PD A Sbjct: 6 LGGAREVGRSAVLV-------DDALLIDYGLLTADPPQYPLRDPEPD------------A 46 Query: 71 IFITHAHEDHYGALHDLWSFLHVP-VYASPFAIG----LLEAKRVYERVSKKIPCISFQ- 124 + ++H H DH GA+ L P ++ +P L S P Sbjct: 47 VVVSHGHLDHVGAVPALLKGDRRPTIHWTPPTAAIARVLARDTLKLHGNSPLCPFSEEHV 106 Query: 125 ------AGDKVDVGAFSIESVRVNH--------SIPETMALVIRSPVGNIVHTGDWKLDD 170 F +E+ + IP + +++ +++TGD+ DD Sbjct: 107 ARLGEVEERHTYAEPFVVEAGGTAYEVTLFNAGHIPGSAHVLVDDGNTRLLYTGDFHTDD 166 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN--AKGCV 228 ++ TD ++C+ST A + ++ + ++ +G Sbjct: 167 QRLVSGTTD--------RPDADVVICESTYADVTHE--DRRVVEDRWVERVRTTLWEGGT 216 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL------- 281 +V + ++ R + ++ +AE + G ++ V ++ + Sbjct: 217 VVA-PAFAIGRTQELMLVAEANDLTPYVDGMGVEVTRLVRRHPEFLRDPEALRRATGAAR 275 Query: 282 ----SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG 337 D + ++I T + L ++ +TV + + G Sbjct: 276 FVTGRDGQRKRIAGDNALIITTSGMLAGGPVHSYL-----PEIRSNPTNTVTLTGYQVEG 330 Query: 338 NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + RL G S H L+ + R ++ HG+ Sbjct: 331 TPGRELQERGRLAINGTVRPVSARVESFDFSAHADRGGLEAFLESYRGSRVLVNHGD 387 >gi|324504608|gb|ADY41989.1| Integrator complex subunit 11 [Ascaris suum] Length = 588 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 66/439 (15%), Positives = 138/439 (31%), Gaps = 66/439 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI---M 62 L PLG ++G + L G + +M+DCG+ D + FPD ++I + Sbjct: 4 LKVTPLGAGQDVGRSCILLSIGGKN----VMLDCGMHMGYQD----ERRFPDFSYISGGV 55 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 L + I+H H DH GAL + P+Y + + R + Sbjct: 56 PLTDYLHCVIISHFHLDHCGALPYMTEMVGYEGPIYMTYPTKAIAPVLLEDFRKVQTEYR 115 Query: 121 ISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIVH 162 + + VN + +I+ ++++ Sbjct: 116 GETNFFTSQMIKTCMRKVTPVNVNEEVNVDDKLSIQAFYAGHVLGAAMFLIKVGSESVIY 175 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAM--REGTCISEKGIKKNIY 218 TGD+ D+ A G+ L+ ++T A R+ E+ K ++ Sbjct: 176 TGDFNT--------TADRHLGAAHVEPGLKPDLLISETTYATTIRDSKRARERDFLKKVH 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVG 272 D + N G VL+ F+ + R + + + E I ++ Sbjct: 228 DCVANG-GKVLIPVFA--LGRAQELCILLESYWERMDLTVPIFFSHGLAEKATQYYRLFI 284 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLA 323 +++ + ++ + + P + + G + Sbjct: 285 SWTNEKIKRTFVHRNMFDFKHIRPFDQSFSDSPGPMVLFSTPGMLHGGQSLRVFKKWCSD 344 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRMY 380 EK+ VI + G + + + D + S H + ++ Sbjct: 345 EKNMVIMPGFCVAG--TIGAKVIGGAKKVEIDGKMLDINLGVEYMSFSAHADAKGIMQLI 402 Query: 381 QWIRPQVLVAIHGEPLHLV 399 + P+ ++ +HGE + Sbjct: 403 RQCEPKNVMFVHGENAKME 421 >gi|18312205|ref|NP_558872.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] gi|18159643|gb|AAL63054.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] Length = 634 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 84/487 (17%), Positives = 161/487 (33%), Gaps = 89/487 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 K + LG E+G + L ++ +++DCG+ ++ P +DL+ DI Sbjct: 170 KEGPITVTFLGAAMEVGRSAILV----STTESNVLLDCGLKPAQNDEEFPLLDLI--DI- 222 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAI--------GLLEAKRV 110 L A+ +THAH DH G L L+ + PVY + +E K Sbjct: 223 ------DRLDAVVLTHAHMDHVGCLPFLFKYGYKGPVYMTDPTKYQAFILLSDYVELKER 276 Query: 111 YERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGN 159 I+ + D+ + H I MA I + N Sbjct: 277 EGLQPSYSKADIETVIYHTITLDYEEVTDIAPDIKLTFYDAGHEIGSAMAHLHIGNGRYN 336 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+K +L + + L+ +ST R+ + + Sbjct: 337 ILYTGDFKYGKTRLLNRAAN--KFKR-----VEMLIMESTYGGRDDVQPPRVEAENALAK 389 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAI 269 + +A G VL+ FS+ R + I+ I ++ + + G ++ + + Sbjct: 390 HVSDAVTRGGKVLIPAFST--GRGQEILYILNKMMEGGLIPRVPVYVDGMIVETLNVYLM 447 Query: 270 DVGIIKKDQLF-----------------LSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + + + Q+ IA + A + Sbjct: 448 YPHYLNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGM 507 Query: 313 SRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV---------IA 358 G + E++ +IF S G I N E ++ + Sbjct: 508 LNGGPVVDYFAQLAHDERNKLIFVSYQAEG--TLGRRILNGEREFVIKSLVGGESKINMR 565 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + SGH +L + + + +P+ +V IHGEP +++ + Sbjct: 566 MEVVSIPGFSGHSDRRELMKYVEHMEPKPKKIVLIHGEPSKIISLATSIELKYKITTIIP 625 Query: 417 RNGKMLR 423 + G+ +R Sbjct: 626 KVGERIR 632 >gi|302348344|ref|YP_003815982.1| Putative exonuclease [Acidilobus saccharovorans 345-15] gi|302328756|gb|ADL18951.1| Putative exonuclease [Acidilobus saccharovorans 345-15] Length = 429 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 109/279 (39%), Gaps = 41/279 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LG E+G G + +++D GV+F +++ P I + Sbjct: 9 KVRI--LGSGREVGR----AAIGVEHRGRMVLLDYGVNFDENEQP--------IYPLHVR 54 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKI 118 K++ A+ +TH+H DH GA L+ + + A+P + + K + Sbjct: 55 PKDVEALVLTHSHLDHVGAAPALFISVKPRLLATPLTLDVTRLLLYDMIKLNGPNLIFDN 114 Query: 119 PCISF--------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + ++ F++ + H IP + ++++ +++T D + Sbjct: 115 STVDDMLGVAESVDYERSFELDDFTLTLMSSGH-IPGSASVLVDVNGRKVLYTSDMNTIE 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCV 228 ++ + A++ +ST +EK +++ D++K G V Sbjct: 174 TKLMNPH-------KLTGVKADAVIIESTYSTVTHPERENTEKEFYESVEDVVKRG-GTV 225 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 LV FS V+R + I+ + E+ G + + R V+ Sbjct: 226 LVPAFS--VARGQEIMCLLEEKGFGWPVWIDGMIRSVTD 262 >gi|168026077|ref|XP_001765559.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683197|gb|EDQ69609.1| predicted protein [Physcomitrella patens subsp. patens] Length = 682 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 62/466 (13%), Positives = 134/466 (28%), Gaps = 75/466 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L PLG E+G + Y K +M DCG+ + P I Sbjct: 16 DKLEVTPLGAGNEVGRSCVYMTY----KGKTVMFDCGIHPGYSGM----AALPYFDEIDP 67 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR------------ 109 ++ + +TH H DH +L + V+ + + + Sbjct: 68 ISIDV--LLVTHFHLDHCASLPYFLEKTNFKGRVFMTHATKAIYKLLLSDFVKISKVSVD 125 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 +++ + I ++V H + ++ +++TG Sbjct: 126 DMLYDEHDIARTMEKIEVIDFHQTMEVNGIRFWCYTAGH-VLGAAMFMVDIAGMRVLYTG 184 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L + + +ST ++ + + D + Sbjct: 185 DYSCEEDRHL-------RAAEMPRFSPDVCIIESTYGVQIHQPRIMRE--RRFTDTVAQT 235 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKR 263 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 236 VSQGGKVLIPAFA--LGRAQELLLILDEYWEAHPELQHIPIYYASPLAKKCMAVYQTYIN 293 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 ++ I + E + P + LSR Sbjct: 294 AMNERIQKQFEVSNPFDFKHIQPLKNIDEFDDIGPAVVMASPGGLQSGLSRQLFDIWCQD 353 Query: 324 EKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 +K++ + + G NE + + LV V + S H Sbjct: 354 KKNSCVIPGYVVEGTPAKAIMNEPKEVTLLSGLV-----VPLNMRVHYISFSAHADFTQT 408 Query: 377 KRMYQWIRPQVLVAIHGEPLHL-VAHKELALQEGIACVPPVRNGKM 421 +RP ++ +HGE + +L Q V + Sbjct: 409 SAFLHELRPPNIILVHGEANEMGRLKAKLTTQFAEQNVKILSPKNC 454 >gi|19074744|ref|NP_586250.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon cuniculi GB-M1] gi|19069386|emb|CAD25854.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon cuniculi GB-M1] Length = 496 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 82/502 (16%), Positives = 163/502 (32%), Gaps = 68/502 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG ++G + L + IM DCG+ +D + FPD ++I K + Sbjct: 1 MNVIPLGAGQDVGRSCILVSI----KGRTIMFDCGMHMGFND----ERRFPDFSYISKTK 52 Query: 66 ---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV------ 114 K + I I+H H DH GAL P+Y + + R Sbjct: 53 SFDKVIDCIIISHFHLDHCGALPYFTEVCGYGGPIYMTLPTKEVCPVLLDDFRKIVAGKG 112 Query: 115 ------------SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 KK+ IS K D F I H + + ++V+ Sbjct: 113 DSIFTYQDISNCMKKVVTISMNETYKHD-EDFYITPYYAGH-VLGAAMFHVVVGDQSVVY 170 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ D LG +I L+ +ST R+ + E+ K + D Sbjct: 171 TGDYSTTPDKHLGP-------ASIKCIRPDLLITESTYGSITRDCRKVKEREFLKAVSDC 223 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIA----EQIGRKIVLLGSS--LKRVVSVAIDVGII 274 + G VL+ F+ + R + + + E+ G K + SS ++ + Sbjct: 224 VARG-GRVLIPIFA--LGRAQELCLLLDGYWERTGLKTPVYFSSGLTEKANEIYKKFISY 280 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKLAEK 325 + + ++ + + + + +S + EK Sbjct: 281 TNETVRKKIFERNMFEYKHIKPFQRHYMESKGPMVLFASPGMLHSGMSLKIFKEWCEDEK 340 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRMYQW 382 + VI + G + N + + + + + S H + + + Sbjct: 341 NLVIIPGYCVRG--TIGEKVLNGATKLEILGESREIRLEVKNLAFSAHADAPGILNVVEQ 398 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 P+ ++ +HGE + K + NG ++ + + + + Sbjct: 399 CSPRNVMLVHGEKSRMKVLKRSIEERFGIPTFLPPNGTLINIPSRSMVSLRIKKESMSKH 458 Query: 443 DGFLIGKFADLGIAKRRQLSFV 464 + + ++ R +LS Sbjct: 459 FKPNL---SRSMVSLRMRLSSE 477 >gi|71682600|gb|AAI00570.1| Cpsf3 protein [Mus musculus] Length = 512 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 64/461 (13%), Positives = 139/461 (30%), Gaps = 69/461 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFI 61 +L+ PLG E+G + + + + IM+DCG+ D LP +DL+ P Sbjct: 11 QLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGTDALPYIDLIDP----- 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + + I+H H DH GAL + + + I Sbjct: 62 ----AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNIS 117 Query: 119 ----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + +V H + +I +++ Sbjct: 118 ADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVKLLY 176 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIYDI 220 TGD+ +D L I N L+ +ST E+ + ++DI Sbjct: 177 TGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDI 229 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGI 273 + ++ ++ R + ++ I ++ + SSL + + Sbjct: 230 VNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYV 286 Query: 274 I-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKL 322 D++ + + + + + + P LSR + Sbjct: 287 NAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCT 346 Query: 323 AEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 +++ VI + + G + + + G ++ + + V S H Sbjct: 347 DKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYVSFSAHTDYQQTSEFI 406 Query: 381 QWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 407 RALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|303391170|ref|XP_003073815.1| putative beta-lactamase fold-containing exonuclease [Encephalitozoon intestinalis ATCC 50506] gi|303302963|gb|ADM12455.1| putative beta-lactamase fold-containing exonuclease [Encephalitozoon intestinalis ATCC 50506] Length = 496 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 85/470 (18%), Positives = 158/470 (33%), Gaps = 71/470 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI--MK 63 + +PLG ++G + L + + +M DCG+ +D + FPD ++I K Sbjct: 1 MNVVPLGAGQDVGRSCILV----TINGRTVMFDCGMHMGFND----ERRFPDFSYISKTK 52 Query: 64 ERKN-LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV------ 114 + I I+H H DH GAL P+Y + + R Sbjct: 53 NFDKVIDCIIISHFHLDHCGALPYFTEVCGYSGPIYMTLPTKEVCPVLLDDFRKIVGGKG 112 Query: 115 ------------SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 KK+ IS K D F I H + + ++V+ Sbjct: 113 DSIFSYQDISNCMKKVVTISMNETYKHD-ENFYITPYYAGH-VLGAAMFHVSVGDQSVVY 170 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDI 220 TGD+ D LG +I L+ +ST R+ + E+ K + D Sbjct: 171 TGDYSTTPDKHLGP-------ASIKCIRPDLLITESTYGSITRDCRRVKEREFLKAVSDC 223 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIA----EQIGRKIVLLGSS---------LKRVVSV 267 + G VL+ F+ + R + + + E+ G +I + SS K+ + Sbjct: 224 IARG-GRVLIPIFA--LGRAQELCLLLDGYWERTGLEIPVYFSSGLTEKANEIYKKFIGY 280 Query: 268 AIDVGIIKKDQLFLSDESF-----GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 + K + + + Y + ++ S G S ++ + Sbjct: 281 TNETVKRKIFERNVFEYKHIKPFQRYYMDNKGPMVLFASPGMLHSGMSL---RIFKEWCE 337 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRM 379 EK+ VI + G I N + +D + + S H + + Sbjct: 338 DEKNLVIIPGYCVRG--TIGEKILNGAKRLEILGEEKDIKLEIKNLGFSAHADAQGILSV 395 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 + P+ ++ +HGE + K+ + NG ++ + I Sbjct: 396 IEQCAPRNVMLVHGERSRMKQLKKSVEERFGIPTFLPPNGTLINIPSKNI 445 >gi|258507944|ref|YP_003170695.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus GG] gi|257147871|emb|CAR86844.1| Hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|259649271|dbj|BAI41433.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 414 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 145/414 (35%), Gaps = 46/414 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 3 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSHETVASAIDNGKLPHVP 55 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ + AIFI+H H DH GAL L ++P+Y S + L + Sbjct: 56 ELFFDQPDSFTNEAIFISHLHIDHMGALQYLQK--NIPIYLSEPSYRLYQVLIRLGIEKP 113 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 S + +G ++ +H P MAL+I H+GD +L+ Sbjct: 114 VANLHSLAFETPLAIGDLTVTGFHSDHDEPGVMALLIDDGARRFAHSGDVRLNGPHADRV 173 Query: 177 V-----TDKDSLCAIGNEGILALMCDSTNAM---REGTCISEKGIKKNIYDIMKNAKGCV 228 + + + EG T ++E ++ ++ ++ V Sbjct: 174 HAWASRFNAEKISLFMLEGTSFSFDTPTPVEDQDHPSVPLTEMSLQTKFRQLLTDSPQLV 233 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 ++ ++ + R+ + A GR++V + +++ + + Sbjct: 234 VINPYNRNYERMAAFQASAHASGRQLVWEPNEAA-ILTAMTNQQPDAILGKTIQLTDLAQ 292 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 P++ ++ + L +L+ + + + + + +K+ Sbjct: 293 APQQYVL-------QNSYAHLERLADLPISAYVHSNGE-------PLGDYDPRFAQLKDW 338 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 L + + + ++ SGH DL + + + P+V+V H A Sbjct: 339 LADHQIPLQF------MNASGHATREDLITLAKEVNPRVIVPWHSFHPEREAEA 386 >gi|327405168|ref|YP_004346006.1| RNA-metabolising metallo-beta-lactamase [Fluviicola taffensis DSM 16823] gi|327320676|gb|AEA45168.1| RNA-metabolising metallo-beta-lactamase [Fluviicola taffensis DSM 16823] Length = 462 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 70/471 (14%), Positives = 144/471 (30%), Gaps = 74/471 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L LG G + + L + ++IDCG+ F +L + Sbjct: 1 MKKN-LTIQFLGAAGTVTGSKYLIELI----DQKLLIDCGL-FQGLK----ELRLLNWQS 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE- 112 + + +L A+ +TH H DH G L L +YA+ I + + +K E Sbjct: 51 LPFDVASLDAVILTHGHLDHVGYLPLLVKQGFKGKIYATEPTIEIAKLILQDSSKIQEED 110 Query: 113 -----------RVSKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPET 148 K + +A + F+ H I Sbjct: 111 AERANRFGYSKHHPAKPLYTTKEAESVFPMFQKEAIDQWIKLSDLFTFRFCYNGH-ILGA 169 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +++ IV +GD D E L+ +ST R Sbjct: 170 TFIELKAADKVIVFSGDIG--------RQEDPLLFSPQKPEQADVLLIESTYGGRTHPTD 221 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK------IVLLGSSLK 262 E + + I+ +G +++ F+ V R + ++ ++ + + + S + Sbjct: 222 PETQLAEVIHKA-ATKQGTIIIPVFA--VERAQLLMFYLWKLKNEQRIPDLPIYMDSPMG 278 Query: 263 RVVSVAIDVGII-----KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 + V + +S E + + + + +A + A + ++ G Sbjct: 279 KHVLQIFANHYAWHKLSPSESKQISQEIQIISKQNETLKLAENKDPKIILAASGMATGGR 338 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGH---IKNRLVEQGVRVIAEDAECP----VHVSGH 370 ++ + G + + + E +R +S H Sbjct: 339 VLTYFEHFLGDKAATILMVGFQGEGTRGRALLDGAKEIKMRGKYWPVNASCVLVEGLSAH 398 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 N+L + +P+ + +HGEP +A K + Sbjct: 399 ADQNELIDWISKLAKKPEKIFIVHGEPAGSLALKSKLKEVYGYDSIIPELN 449 >gi|242007002|ref|XP_002424331.1| Cleavage and polyadenylation specificity factor 73 kDa subunit, putative [Pediculus humanus corporis] gi|212507731|gb|EEB11593.1| Cleavage and polyadenylation specificity factor 73 kDa subunit, putative [Pediculus humanus corporis] Length = 692 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 67/462 (14%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N+ L PLG E+G + + + + +M+DCG+ L G+D P + I Sbjct: 16 ENDLLRIRPLGAGQEVGRSCIMLEFKGKN----VMLDCGI---HPGLSGLDA-LPFVDLI 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV--------- 110 + + +TH H DH GAL + + + Sbjct: 68 E--ADEIDLLLVTHFHLDHSGALPWFLLKTKFKGRCFMTHATKAIYRWLLSDYIKVSNIS 125 Query: 111 -------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + + I ++ ++ + H + +I +++ Sbjct: 126 TEQMLYTDHDLEESMEKIETINFHEEKEIFGIKFWAYHAGH-VLGAAMFMIEIAGVRVLY 184 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 TGD+ +D L I + L+ +ST E+ + N+ + Sbjct: 185 TGDFSRQEDRHLMA-------AEIPSIKPDVLITESTYGTHIHEKREERETRFTNLIHTI 237 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA------ 268 N G L+ F+ + R + ++ I + + SSL + Sbjct: 238 INRGGRCLIPVFA--LGRAQELLLILDDYWSQHPELHDIPIYYASSLAKKCMAVYQTYVN 295 Query: 269 -------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + I G+ + + P + LSR Sbjct: 296 AMNDKIRRQIAINNPFIFRHIHNLKGIDHFDDIGPCVV--MASPGMMQSGLSRELFELWC 353 Query: 322 LAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI + + G I +V + + + + + S H Sbjct: 354 TDSKNGVIIAGYCVEGTLAKQILSEPEEIVTLSGQKLPLKMSVDYISFSAHTDYKQTSEF 413 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P +V +HGE L + + Sbjct: 414 VRALKPPHVVLVHGEQNEMNRLKAALKREYEDDPNTSIEIHN 455 >gi|126465835|ref|YP_001040944.1| beta-lactamase domain-containing protein [Staphylothermus marinus F1] gi|126014658|gb|ABN70036.1| beta-lactamase domain protein [Staphylothermus marinus F1] Length = 652 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 75/456 (16%), Positives = 150/456 (32%), Gaps = 66/456 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG E+G + L + +++D G++ D +P I Sbjct: 183 KNNYVRITALGGFMEVGRSAILVE----TRESRVLLDLGINVGAGTDY--DRAYPFIDID 236 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 L A+ +THAH DH G + L+ + P+Y + L+E + Sbjct: 237 QLNLSELDAVIVTHAHLDHIGLVPLLYKYGYRGPLYVTKPTRELMVIMIKDLIEVTQREG 296 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I + GD DV + H + + I + NIV Sbjct: 297 KYLPYSEKDLMTTILHTIPLEYGDVTDVAPDIKVTMYNAGHILGSAIVHLHIGMGLHNIV 356 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+K +L + L+ +ST E + I + Sbjct: 357 YTGDFKYAPTRLLNR-------AEDKFPRVETLIMESTYGATRQQSRREAE-AELIRIVK 408 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 K + +V +V R + I+ + + + G + + Sbjct: 409 KTIERKGIVLIPVFAVGRGQEIMLVLNDAISKGLIPKVDVFIEGLVNEVTAIHTQYPEYL 468 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE---------PRSALAQLSRGEM----RNVK 321 ++ + + + +I +G+ + L+ G + + Sbjct: 469 NRNIKEMIYRGENPFTADYFHIIESGTARPDIVETKPSIILATSGMLTGGPAVEYLKLIA 528 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH--------VSGHPYP 373 +++++F G IK+ + E V + ++ SGH Sbjct: 529 SDPRNSLVFVGYQAEG--TLGRRIKDGMRELQTVVDNKVEIIRINLEVYSIDGFSGHSDQ 586 Query: 374 NDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 ++L R + I +P+ ++ HGEP ++ L + Sbjct: 587 SELLRYVRNISPKPRNIILNHGEPSAIMTLARLVSK 622 >gi|168007963|ref|XP_001756677.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692273|gb|EDQ78631.1| predicted protein [Physcomitrella patens subsp. patens] Length = 682 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 61/468 (13%), Positives = 136/468 (29%), Gaps = 79/468 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L PLG E+G + Y K +M DCG+ + P I Sbjct: 16 DKLEVTPLGAGNEVGRSCVYMTY----KGKTVMFDCGIHPGYSGM----AALPYFDEIDP 67 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR------------ 109 ++ + +TH H DH +L + V+ + + + Sbjct: 68 ISIDV--LLVTHFHLDHCASLPYFLEKTNFKGRVFMTHATKAIYKLLLSDFVKISKVSVD 125 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 +++ + I ++V H + ++ +++TG Sbjct: 126 DMLYDEHDIARTMEKIEVIDFHQTMEVNGIRFWCYTAGH-VLGAAMFMVDIAGMRVLYTG 184 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L + + + +ST ++ + + D + Sbjct: 185 DYSCEEDRHL-------RAAEMPHFSPDVCIIESTYGVQIHQPRIMRE--RRFTDTVAQT 235 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKR 263 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 236 VSQGGKVLIPAFA--LGRAQELLLILDEYWEAHPELQHIPIYYASPLAKKCMAVYQTYIN 293 Query: 264 VVS--VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 ++ + + + + + P + LSR Sbjct: 294 AMNDRIQKQFEVSNPFDFKHIQPLKNIDGFDDIGPAVV--MASPGGLQSGLSRQLFDIWC 351 Query: 322 LAEKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 +K++ I + G NE + + LV V + S H Sbjct: 352 QDKKNSCIIPGYVVEGTLAKAIMNEPKEVTLLSGLV-----VPLNMRVHYISFSAHADFT 406 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHL-VAHKELALQEGIACVPPVRNGKM 421 +RP ++ +HGE + +L Q V + Sbjct: 407 QTNAFLHELRPPNIILVHGEANEMGRLKAKLITQFAEQNVKILSPKNC 454 >gi|332796323|ref|YP_004457823.1| beta-lactamase domain-containing protein [Acidianus hospitalis W1] gi|332694058|gb|AEE93525.1| beta-lactamase domain protein [Acidianus hospitalis W1] Length = 638 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 85/462 (18%), Positives = 157/462 (33%), Gaps = 83/462 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LG EIG + L + +++D GV+ + + +FP + Sbjct: 174 KDRYVRITALGAFQEIGRSAILVE----TPESRVLLDTGVN---PSVNFGERMFPKLDID 226 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 ++L A+ ITHAH DH G + L+ + PVY +P + LL+ Sbjct: 227 QLRLEDLDAVVITHAHLDHCGMVPYLFKYGYEGPVYTTPPTRDVMALMQLDLLDVAEKDG 286 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ + D+ + H + M I NIV Sbjct: 287 RPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHILGSAMVHLHIGEGTHNIV 346 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYD 219 +TGD+K +L T + + L+ ++T + SEK + I + Sbjct: 347 YTGDFKYAKTRLLDRATSE-------FPKVDTLIMETTYGAQEQTNREESEKQLIDIINN 399 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIV 255 + G VL+ + V R + ++ ++ Sbjct: 400 TINRG-GKVLIPVLA--VGRGQEMMLVINNALKNKLIPEVPVYVTGLFDEVTAIHTAYPE 456 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT------GSQGEPRSAL 309 L ++ + + + + + E I++AT G E A+ Sbjct: 457 WLSREVRDAILYRDENPFVSDQFKRIEGYREDIAQGEPSIILATSGMLNGGPAVEFFKAM 516 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI----GHIKNRLVEQGVRVIAEDAECPV 365 A S+ + V + T+ R EV I G ++N + V+V+ Sbjct: 517 APDSKNSIVFVSYQAEGTLGRKVRD-GAKEVQIIGRDGRVENIQINMEVKVVDG------ 569 Query: 366 HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELA 405 SGH L + + +P+ ++ HGE ++ K L Sbjct: 570 -FSGHSDRRQLLKFLHDLTPKPKNIILDHGEYNSMMTFKRLI 610 >gi|73667742|ref|YP_303757.1| cleavage and polyadenylation specificity factor [Methanosarcina barkeri str. Fusaro] gi|72394904|gb|AAZ69177.1| cleavage and polyadenylation specificity factor [Methanosarcina barkeri str. Fusaro] Length = 637 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 120/342 (35%), Gaps = 42/342 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LGG E+G + L + I+IDCGV+ D+ L P++ + Sbjct: 177 KDQWVRVTSLGGCKEVGRSCFLL----STPESRILIDCGVNVGSDENMTPYLYVPEVFPL 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EA 107 + A+ +THAH DH G + L+ F PVY +P L+ E Sbjct: 233 ----NQIDAVIVTHAHLDHQGLVPLLFKFGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEG 288 Query: 108 KRV--YERVSKKIPCISFQAGDKVDVG---AFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 K++ + K + + + H + ++ I + N+V Sbjct: 289 KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 TGD+K + + + + ++ ++T S K ++++ ++ Sbjct: 349 FTGDYKYEKTRLFDPAVN--KFPR-----VETVVSEATYGNSNAFQPSLKDAERHLQMVV 401 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGIIKK 276 KN G ++ F+ V R + ++ + E+ I + L ++ A + Sbjct: 402 KNTVERGGICIIPAFA--VGRSQEVMIVLEESIRKGLIPEVPVYLDGMIWEATAIHATHP 459 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 + L + + + ++ + Sbjct: 460 EYLNNDLRKLIFQKGQNPFLSECFKPVDSHDMRQKIIQNPHP 501 >gi|312083284|ref|XP_003143797.1| RNA-metabolising metallo-beta-lactamase [Loa loa] gi|307761039|gb|EFO20273.1| RNA-metabolising metallo-beta-lactamase [Loa loa] Length = 644 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 62/436 (14%), Positives = 134/436 (30%), Gaps = 58/436 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-- 62 E+ +PLG ++G + L G + +M+DCG+ D + FPD +FI Sbjct: 58 EIKIVPLGAGRDVGRSCILVSIGGKN----VMLDCGMHMGYSD----ERRFPDFSFISGG 109 Query: 63 -KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L + ITH H DH G+L + P+Y + + R + Sbjct: 110 GSLTEFLDCVIITHFHLDHCGSLPHMSEVIGYDGPIYMTYPTKAIAPVLLEDYRKIQTEF 169 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + +N + I +++ Sbjct: 170 KGDKNFFTSQMIKNCMKKVIAINIHEKIDIDNELSIRAFYAGHVLGAAMFQIMVGSESVL 229 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ D + L+ +ST A R+ E+ K ++D Sbjct: 230 YTGDFNTTPDRH------LGAARVEPGLKPDLLISESTYATTIRDSKRARERDFLKKVHD 283 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + N G VL+ F+ + R + + + E I ++ Sbjct: 284 TVSNG-GKVLIPVFA--LGRAQELCILLESYWERMNLKYPIFFSQGLAEKANQYYRLFIS 340 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVIFSS 332 +++ + ++ + + P L L Sbjct: 341 WTNEKIKRTFVERNMFDFKHIRPFEQSYTDSPGPMVLFSTPGMLHGGQSLRVFTKWCSDE 400 Query: 333 R---AIPGN---EVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRMYQWI 383 + +PG + + + + + + + S H + ++ + Sbjct: 401 KNLIIMPGFCVANTVGAKVISGMKKIEIAGRMREINLGVEYMSFSAHADAKGIMQLIRDC 460 Query: 384 RPQVLVAIHGEPLHLV 399 +P+ ++ +HGE + Sbjct: 461 QPKNVMFVHGEDAKME 476 >gi|30677952|ref|NP_178282.2| ATCPSF73-II (cleavage and polyadenylation specificity factor 73 kDa subunit-II); catalytic/ protein binding [Arabidopsis thaliana] gi|332278175|sp|Q8GUU3|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-II; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit II; Short=AtCPSF73-II; Short=CPSF 73 kDa subunit II; AltName: Full=Protein EMBRYO SAC DEVELOPMENT ARREST 26 gi|62320470|dbj|BAD94982.1| putative cleavage and polyadenylation specifity factor [Arabidopsis thaliana] gi|330250395|gb|AEC05489.1| cleavage and polyadenylation specificity factor subunit 3-II [Arabidopsis thaliana] Length = 613 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 75/450 (16%), Positives = 145/450 (32%), Gaps = 70/450 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG EIG + + + K IM DCG+ DD +P+ + I K Sbjct: 8 LGAGQEIGKSCVVV----TINGKKIMFDCGMHMGCDDHN----RYPNFSLISKSGDFDNA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER----------VS 115 + I ITH H DH GAL + P+Y S L R Sbjct: 60 ISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEEL 119 Query: 116 KKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I+ + + I + H + + + + IV+TGD+ Sbjct: 120 FTTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH-VLGAVMVYAKMGDAAIVYTGDY 178 Query: 167 KLDDDAILGDVTDKDS-LCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN 223 + TD+ I + L+ +ST A R E+ + ++ + Sbjct: 179 NM--------TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAG 230 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSS-------LKRVVSVAIDVG 272 G L+ +F+ + R + + + + K+ + SS + + ++ Sbjct: 231 G-GKALIPSFA--LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQ 287 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTV 328 +K+ + F +I + L G ++ + + V Sbjct: 288 NVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLV 347 Query: 329 IFSSRAIPGNEVAIGH-----IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 ++ G + V V V S H + + +++ Sbjct: 348 ALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVR--CKVHQVAFSPHTDAKGIMDLTKFL 405 Query: 384 RPQVLVAIHGE-PLHLVAHKELALQEGIAC 412 P+ +V +HGE P ++ +++ + I C Sbjct: 406 SPKNVVLVHGEKPSMMILKEKITSELDIPC 435 >gi|67475897|ref|XP_653580.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] gi|56470550|gb|EAL48194.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] Length = 452 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 132/440 (30%), Gaps = 53/440 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + GG +G + + I+ DCG + P G+D + + Sbjct: 1 MKVHVFGGGKSVGSSCVVVE----GKEDAILFDCGYN-PVRPDVGID-----FSRMNAIS 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + AI ITH H DH G L L F+ VP+Y S LL + C + Sbjct: 51 SKIRAICITHFHVDHVGMLPWLTKFMDVPIYLSEPTQALLSLIINDIHSGNNLFCQADFD 110 Query: 126 GDKVDVGAFSIESVR-----------VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + + I IV++GD+ + +L Sbjct: 111 KCILQCKPIDPTMTKRVTQNLSIRCIYAGHALGAVMYEILLDGKRIVYSGDFDVSPSFLL 170 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 I + I L+ +ST + E + ++ A+ V Sbjct: 171 -------RGAEITSHAIDYLITESTCINEQHKRRYE--LYHYADCLLSAARSGGSVQIVV 221 Query: 235 SSVSRIRSIIDIA------EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 + + R + ++ I + + G L ++ + +D + ++F Sbjct: 222 NGIGRGQEVMGIVLSIVRRCHLTMPLCCSGGMLTKIANEYKKWKNWLRDDVHELVDNFSK 281 Query: 289 YPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 Y Q IA + + +K K VI S Sbjct: 282 YQMLSAQTNYIAITTPATLTKGHSL---EVFEKIKTDPKSFVILPSYVSSN-----PKTL 333 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 Q + ED H L+ + ++P+ + +HG+PL + + Sbjct: 334 KETGYQCKIIRTEDNN-------HSDGFGLQEAIRALQPKEVFLVHGDPLKMQKSQVFFQ 386 Query: 407 QEGIACVPPVRNGKMLRLFP 426 + V N + L + Sbjct: 387 KLFNLPVHMPNNNEALVIND 406 >gi|20094663|ref|NP_614510.1| metal-dependent RNase [Methanopyrus kandleri AV19] gi|19887824|gb|AAM02440.1| Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Methanopyrus kandleri AV19] Length = 652 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 101/278 (36%), Gaps = 45/278 (16%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGG E+G + + +++DCGV+ + G D +P Sbjct: 195 RVSALGGFQEVGRSSLFLH----TEESRVLLDCGVNVAAN---GTDA-YPHFNVPEFRMD 246 Query: 67 NLMAIFITHAHEDHYGALHDLWS----FLHVPVYASPFAIGL-----------LEAKRVY 111 +L AI ITHAH DH G L + VPVY +P L LE + Sbjct: 247 DLDAIVITHAHLDHCGFLPYFYRHKVIESRVPVYCTPPTRDLMYLLLTDYIKVLEKRGQE 306 Query: 112 ERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMALVI-RSPVGNIVHT 163 ++K + +D SI H + V + N V+T Sbjct: 307 PPYTEKDVKKVIKRTITIDYREPTDITPDMSITFYNAGHILGSASVHVFLQDKGHNFVYT 366 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD +L + D + + +++ ++T S + + I+++ Sbjct: 367 GDINPTPSRLL-EGAD-NRFKR-----VDSMVVEATYGDSRH--GSRRKEENRFRKIVRD 417 Query: 224 A---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 G VL+ +F+ V R + ++ + E + RK L G Sbjct: 418 TLKKGGKVLIPSFA--VGRAQEVMLVLEDMHRKDELEG 453 >gi|146293980|ref|YP_001184404.1| beta-lactamase domain-containing protein [Shewanella putrefaciens CN-32] gi|145565670|gb|ABP76605.1| beta-lactamase domain protein [Shewanella putrefaciens CN-32] Length = 429 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 149/421 (35%), Gaps = 51/421 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL----------- 53 ++ L G IG + +G I++D G +D Sbjct: 3 QISVTILRGADTIGGSCVKINHG----EDSIVLDYGAPLMDSTGVSIDADLASSPSMENG 58 Query: 54 VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE- 112 + DI ++ + +A ++HAH DHYG L L + +Y S + ++ ++ Sbjct: 59 ILLDIQ--QQDTRPPLAYLLSHAHPDHYGLLRSLPKSSN--IYLSDSSYSMMTIGNLFYP 114 Query: 113 ---RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 R S C F G VG F++ + ++HS +L+I + +TGD++ Sbjct: 115 EALRFSSLEQCRQFTPGKPFQVGPFTVTAFLMDHSAFGACSLLIEVDGKQVYYTGDFR-- 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 V+D + ++ L + N +E ++ + + G Sbjct: 173 GHGRKSQVSDY-IYANVKQPDLMLLEGTTLNGGHSLQFPTEVSVEDAMVSALNEGDGPAF 231 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 V+ S++ RI S+ + ++ G+++V+ L ++ + +D ++ Sbjct: 232 VSASGSNIDRIVSLYNATKRTGKELVI---DLYQLYLLEALKKYSPSLPPHKNDHLKVIF 288 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI-------PGNEVAI 342 P+ QL +I + + + N+ + +F E + Sbjct: 289 PQFQLAIIKSEFGDDFLRYSNR-----HVNLSKLKGTNYVFRLSPYAMTPYLDSFKEKGV 343 Query: 343 G-HIK-------NRLVEQGVRVIAEDAECP--VHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 + + + + E +H SGH Y L+ I P+VLV IH Sbjct: 344 KPKLIYSMWLGYQSKQPKFAEIANKYQESWQYIHTSGHAYLEHLQSFAGNISPKVLVPIH 403 Query: 393 G 393 Sbjct: 404 T 404 >gi|13541495|ref|NP_111183.1| metal-dependent RNase [Thermoplasma volcanium GSS1] gi|14324879|dbj|BAB59805.1| cleavage and polyadenylation specificity factor [Thermoplasma volcanium GSS1] Length = 639 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 74/463 (15%), Positives = 140/463 (30%), Gaps = 80/463 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD----LVFPDITF 60 + LGG E+G + L + ++IDCG+ D D L P++ Sbjct: 179 WVRLTALGGHSEVGRSATLV----STKNSKVLIDCGMMNVGPDADPWDAAPYLYVPEVQP 234 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVY 111 + ++ A+ +THAH DH G L L+ + PVY + L ++ R+ Sbjct: 235 L----SSIDAVILTHAHLDHSGLLPLLFKYGYDGPVYMTQPTRDLAVLLQDDYIKVARME 290 Query: 112 ERVSKKIPCISFQAGDKV----------DVGAFSIESVRVNHSIPETMAL-VIRSPVGNI 160 + + H + I + N+ Sbjct: 291 GGKVPYESKYIREELKHTITLRYGETTDITRDMRLTFYNAGHILGSASVHLHIGDGLYNV 350 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V +GD K + + +K M +ST R+ + + + + D+ Sbjct: 351 VLSGDVKFEKTWLFNPANNKFPRAE-------TFMTESTYGGRDDYSFTREEATETLVDV 403 Query: 221 MKNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGSSLKRVVSVAID 270 + G VL+ F+ V R + ++ + A + G + L G ++ A Sbjct: 404 INRTHDRGGSVLIPVFA--VGRSQEVMIVLEDAMRNGRIPQMNVYLDGMIMEATAIHAAY 461 Query: 271 VGIIKKD---------------------QLFLSDESFGLYPREQLIVIATGSQG--EPRS 307 + K+ + E P ++++ +G Sbjct: 462 PEYLNKELREAIMVRKENPFLSQIFKKVETREQREDIAEDPESKVVLATSGMMNGGPVME 521 Query: 308 AL-AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 A + V + + R G A + + I D E Sbjct: 522 YFKAWAGNPKHTLVFVGYQADGTMGKRIQSG---AKEVTISEGGKTVTYQINMDVETAEG 578 Query: 367 VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 SGH L + +P+ ++ HG+ L Q Sbjct: 579 FSGHSTKKQLLAYIATMQPKPKKILVNHGDNGKTAEFARLVRQ 621 >gi|126306625|ref|XP_001364674.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 678 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 73/453 (16%), Positives = 141/453 (31%), Gaps = 60/453 (13%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER--- 65 +P+G ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 85 VPVGAGQDVGRSCILVSIAGKN----VMLDCGMHMGYND----DRRFPDFSYITQNGRLT 136 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKI 118 L + I+H H DH GAL P+Y + + R + Sbjct: 137 DFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGET 196 Query: 119 PCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGD 165 + Q ++ + + I+ + V+TGD Sbjct: 197 NFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESAVYTGD 256 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN 223 + + D LG I L+ +ST A R+ E+ K +++ ++ Sbjct: 257 YNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVER 309 Query: 224 AKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD 277 G VL+ F+ + R + + + I ++ Sbjct: 310 G-GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQ 366 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTV 328 ++ + ++ + + P + + G R EK+ V Sbjct: 367 KIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMV 426 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE--DAECPVHVSGHPYPNDLKRMYQWIRPQ 386 I + G R +E R I E + S H + ++ + P Sbjct: 427 IMPGYCVQGTVGHKILSGQRKLEMEGRQILEVKMQVEYMSFSAHADAKGIMQLVRQAEPD 486 Query: 387 VLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 ++ +HGE + K+ QE NG Sbjct: 487 NVLLVHGEAKKMEFLKQKIEQEFHVNCYMPANG 519 >gi|322786053|gb|EFZ12664.1| hypothetical protein SINV_01905 [Solenopsis invicta] Length = 686 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 63/462 (13%), Positives = 132/462 (28%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + + Sbjct: 15 ESDLLSIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLV 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + + + I Sbjct: 67 E--ADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIA 124 Query: 120 C-----------ISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVH 162 S + ++ + H + +I I++ Sbjct: 125 TEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGH-VLGAAMFMIEIAGVKILY 183 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L I N L+ +ST ++ + + + Sbjct: 184 TGDFSRQEDRHLMA-------AEIPNIHPDVLITESTYGTHIHEKREDRE-GRFTNLVHE 235 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 ++ R + ++ I ++ + SSL + + Sbjct: 236 IVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNA 295 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + E P + LSR + Sbjct: 296 MNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDA 355 Query: 325 KDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI + + G + G ++ + + + S H Sbjct: 356 KNGVIIAGYCVEG---TLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 412 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P +V +HGE L + + Sbjct: 413 IRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPSTTMEIHN 454 >gi|229823552|ref|ZP_04449621.1| hypothetical protein GCWU000282_00850 [Catonella morbi ATCC 51271] gi|229786996|gb|EEP23110.1| hypothetical protein GCWU000282_00850 [Catonella morbi ATCC 51271] Length = 463 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 71/429 (16%), Positives = 146/429 (34%), Gaps = 67/429 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLV--------FPDITFI 61 GG+ IG N+ G+ I+ D G F ++L VDL P I + Sbjct: 19 GGLDTIGGNIVSLEAGNYR----ILTDFGALFGASLEELKQVDLTPSLLEKGHLPAIDGL 74 Query: 62 MKERK------------NLMAIF-ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 ++ ++ I ++H H DH G L L P+YA ++ + + Sbjct: 75 YTRQQLGASDLASYEETDMKTIVCLSHLHLDHIGGFGQLPEDL--PIYALEDSVSFYQ-R 131 Query: 109 RVYERVSK--KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + K+ + Q+ G F+IE V +H ++ I P +V++GD+ Sbjct: 132 LASDGLLPDFKVNWQAVQSEVPFQFGPFTIEFVVSDHDTIGAASIFITGPDLKVVNSGDF 191 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC------------------- 207 +L + + A + L L+ +T + G+ Sbjct: 192 RL--TGFHPERVLHWAQKARDFQPDLFLVEGTTFSFDPGSRDDRMQLPEDLAARVASISA 249 Query: 208 ISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +E K+ ++ A V + + ++ R+ + + GR +VL Sbjct: 250 GNEAKFLKDFTQVVAQAGNQLVALNVYPQNIERLVYMAQALNRAGRTLVLEP----NYYR 305 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + ++ + P + + + Q P Q+ + + + + Sbjct: 306 LLRPYMAPEAALATINWDGDSKLPVQDV-LTWDQVQAAPAQYAVQVDYEQHHDYIFSLSE 364 Query: 327 TVIFSSR--AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + S + + +V+ G + HVSGH DL + + Sbjct: 365 GIYIHSNGVPLGAYDARYQPWLEGIVKAGWQFYHG------HVSGHASTQDLCLVNYVVG 418 Query: 385 PQVLVAIHG 393 +++V H Sbjct: 419 AKLVVPWHS 427 >gi|296109857|ref|YP_003616806.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus infernus ME] gi|295434671|gb|ADG13842.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus infernus ME] Length = 631 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 142/440 (32%), Gaps = 65/440 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + L + +++DCGV+ ++ ++P Sbjct: 176 WIRVSFLGGAREVGRSCLLL----QTPDTKVLLDCGVNIAYEE-----KMYPQFDAPEFS 226 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 ++L A+ ITHAH DH G L L+ + PVY + L+ + K Sbjct: 227 IEDLDAVIITHAHLDHCGFLPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLDIAEKEGKPV 286 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI------VHTGDWKLDDDAI 173 S + + V V I ++ L + + + +H G+ + Sbjct: 287 PFSSKEIKE-CVKHVIPLDYGVTTDISPSIKLTLHNAGHVLGSAIAHLHFGEGLYNLAYT 345 Query: 174 LGDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKGC 227 D L + AL+ +ST + +K + I G Sbjct: 346 GDLKFDTSRLLEPAVCQFPRLEALIIESTYGGYDDVLPDRAEAEKELLRIVIEHIEKGGK 405 Query: 228 VLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKRV 264 +L+ F V R + ++ + E+ + L G ++R Sbjct: 406 ILIPVFG--VGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKDMRRK 463 Query: 265 VSVAIDVGIIKKDQLFL---SDESFGLYPREQLIVIATGSQGEPRSAL----AQLSRGEM 317 + D + + +D + E +++AT +L + Sbjct: 464 IFQEGDNPFLSDVFQRVRNTNDRRRIIDDSEPCVILATSGMLTGGPSLEYFKNLAPDEKN 523 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKN-RLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 + + + + G + KN + + + E SGH L Sbjct: 524 AIIFVGYQAEGTLGRKVQKGWKEIPIVTKNGKTKSIPINMGVYTVEG---FSGHSDRKQL 580 Query: 377 KRMYQWIR--PQVLVAIHGE 394 R + ++ P+ ++ +HGE Sbjct: 581 IRYVRKVKPSPEKIIMVHGE 600 >gi|70606450|ref|YP_255320.1| metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] gi|68567098|gb|AAY80027.1| hypothetical metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] Length = 631 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 81/476 (17%), Positives = 156/476 (32%), Gaps = 75/476 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LGG E+G + L + I++D G++ + + +FP I Sbjct: 172 KDRFVRITGLGGFNEVGRSAVLVE----TPESKILLDVGLN---PSVSYGEKLFPRIDID 224 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 + +++ A+ ITHAH DH G + L+ + PVY +P + L+ Sbjct: 225 QVKLEDIDAVVITHAHLDHCGMVPLLFKYGYEGPVYMTPPTRDIMALAQLDALDVAEKEG 284 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ G+ D+ + H + MA I + N+V Sbjct: 285 RPIPYTAKEVRRELLHTITLDYGEVTDIAPDVKLTFYNAGHILGSAMAHLHIGEGLHNVV 344 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYD 219 +TGD+K +L D+ + ++ ++T +E SE + I Sbjct: 345 YTGDFKYARTKLLDKANDE-------FIRVDTMIMETTYGAHDQENREESEAKLIDIINK 397 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR---------------------KIVLLG 258 + ++ I +I+ A + + L Sbjct: 398 TISKGGKVLIPVLSVGRGQEIMLVINDAMKNKKIPEVPVYITGMVDEITAIHTAYPEWLS 457 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 L+ + + + + + + E I+IAT A+ Sbjct: 458 RELREAILYRDENPFMSEFFKRIEGYKEDIAQGEPSIIIATSGMLNGGPAVEFFKNMAHD 517 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC---------PVHVSG 369 +++++F S G +++ + + E SG Sbjct: 518 -----TRNSIVFVSYQAEG--TLGRKVRDGAKDIQILDRDGRVENIKVNMEIGVVEGFSG 570 Query: 370 HPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 H L + ++P+ LV HGEP + + K L I + V K+L Sbjct: 571 HSDRRQLLAFLRNLNVKPKNLVLNHGEPSAISSFKRLVESGKIKGIDNVYAPKILE 626 >gi|229551797|ref|ZP_04440522.1| hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus LMS2-1] gi|229314851|gb|EEN80824.1| hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus LMS2-1] Length = 419 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 64/417 (15%), Positives = 145/417 (34%), Gaps = 52/417 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-----DLVFPDIT 59 + F L G+ IG N + + + + +++D GV+ V + P + Sbjct: 8 TIRF--LNGLNTIGGN--IVEFATKT--SRVIMDFGVA-ADLSHETVASAIDNGKLPHVP 60 Query: 60 FIMKERKNL---MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + ++ + AIFI+H H DH GAL L ++P+Y S + L + Sbjct: 61 ELFFDQPDSFANEAIFISHLHIDHMGALQYLQK--NIPIYLSEPSYRLYQVLIRLGIEKP 118 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + +G ++ +H P MAL+I H+GD +L+ Sbjct: 119 VANLHPLAFESPLAIGDLTVTGFHSDHDEPGVMALLIDDGARRFAHSGDVRLNGPHADRV 178 Query: 177 VTDKDSLCAIGNEGILALMCDSTNA-----------MREGTCISEKGIKKNIYDIMKNAK 225 A E I + + T+ ++E ++ ++ ++ Sbjct: 179 HAWASRFNA---EKISLFLLEGTSFSFDTPTPVEDQDHPSVPLTEMSLQTKFRQLLTDSS 235 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V++ ++ + R+ + A GR++V + +++ + + Sbjct: 236 QLVVINPYNRNYERMAAFQVSAHASGRQVVWEPNEAA-ILTAMTNQQPDAILGKTIQLTD 294 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 P++ ++ + L +L+ + + + + + + Sbjct: 295 LAQAPQQYVL-------QNSYAHLERLADLPISAYVHSNGE-------PLGDYDPRFAQL 340 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 K+ L + + + ++ SGH DL + + + P+V+V H A Sbjct: 341 KDWLADHQIPLQF------MNASGHATREDLITLAKEVNPRVIVPWHSFHPEREAEA 391 >gi|126030713|pdb|2I7T|A Chain A, Structure Of Human Cpsf-73 gi|126030714|pdb|2I7V|A Chain A, Structure Of Human Cpsf-73 Length = 459 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNT 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ I ++ + SSL + Sbjct: 226 VHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTY 285 Query: 273 II-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVK 321 + D++ + + + + + + P + LSR + Sbjct: 286 VNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 Query: 322 LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ VI + + G + + + G ++ + + + S H Sbjct: 346 TDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 447 >gi|167042966|gb|ABZ07680.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW137N18] Length = 422 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 73/427 (17%), Positives = 151/427 (35%), Gaps = 47/427 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITF-IM 62 + LG E+G + G+ +++D GV F + D+ P ++ + Sbjct: 1 MKIKVLGAANEVGRS----GFLVNCDGTNLLLDYGVMFSRRRDEPP---------SYPLH 47 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKI 118 + K++ A ITHAH DH G + L++ + VY +P + L+E E+ Sbjct: 48 VKPKDVDATIITHAHLDHSGCVPSLFNGGNTSVYCTPPTLDLSMLLIEDMLKIEKNKHSF 107 Query: 119 PC----------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V VG + E H I +++ + + +TGD Sbjct: 108 HNGHVNSMLRNSKEIGFKEPVKVGNATFELRSSGHVI-GGSTVLVEADNKRLFYTGDINP 166 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGC 227 + +L + I L+ +ST + + E + + + KG Sbjct: 167 NGSRMLPK-------ADLDIGDIDILITESTYSQTDQMPREESENGLIEFANEVMDRKGI 219 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF---LSDE 284 + + +FS S+ + + +V+ G +LK + +K ++F + D Sbjct: 220 LFIPSFSVERSQEIACVLKNVNFKYPVVMDGMALKVNDIMLRYPEYLKDMKIFADVIDDA 279 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSR--GEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 ++ I+ + + M+N+ +K+ + S G Sbjct: 280 VLIRDHGDRERAISEPCVVISPAGMLVGGNAVYYMQNLATDDKNGIAIVSYQAEGTPGKK 339 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVA 400 ++ +G + + SGH L M + I+ P+ ++A+HG+ Sbjct: 340 LLETGKISFRGKEMKVKAPLKQFQFSGHGDRTSLFDMIKNIKGDPK-VLAVHGDENSCTK 398 Query: 401 HKELALQ 407 E + Sbjct: 399 FAEEIHE 405 >gi|159042543|ref|YP_001541795.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921378|gb|ABW02805.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167] Length = 422 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 74/391 (18%), Positives = 139/391 (35%), Gaps = 57/391 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 SR +++D GV+F + P VFP + ++L A+ ++HAH DH GAL Sbjct: 18 ILVKGSRNSVLLDYGVNFDDEGKP----VFP----LHVRPRDLSAVVLSHAHLDHCGALP 69 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRV-------------YERVSKKIPCISF-QAGDKVDV 131 L+ P+YA+P L E E V + ++ D V++ Sbjct: 70 GLYISASPPLYATPLTAELAEIMFKDTVKLSGYYLPYEEEEVRNTLRRVNPVNFNDTVNL 129 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 S+ + H +P +M ++ I+ TGD+ L +L D S+ I Sbjct: 130 NGDSLTFLNAGH-VPGSMMTLLNIDGFRILFTGDFNLSQSNLLN-GADVYSI----PRDI 183 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 ++ ++T A EK ++ I + V S ++ R + ++ + Sbjct: 184 DLVVMEATYAGGTHP-PREKLEEEFINAVKTTLDEGGSVLIPSFTIGRTQELLLTLIKHN 242 Query: 252 RKIVLLG---------SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE----QLIVIA 298 V + + + D + K + S+ Y + Q ++I Sbjct: 243 ITDVPIYIDGLARIANRIISKYPQFLRDPNLYAKAITYSSEVMGNYYRKNALRDQAVIIT 302 Query: 299 TGSQGEPRSALAQLSR--GEMRNVKLAEKDTVIFSSRAIPGNE---VAIGHIKNRLVEQG 353 + +A+ L R G+ RN + + + PG E + + N + Sbjct: 303 PAGMLKGGAAVYYLKRLGGDRRNAVILPS----YQAPDSPGYELLTKGVVKVDNEEIRVN 358 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 +V D S H +L + + Sbjct: 359 AKVYWFD------FSAHSGLEELINFISYFK 383 >gi|307199387|gb|EFN80012.1| Cleavage and polyadenylation specificity factor subunit 3 [Harpegnathos saltator] Length = 685 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 63/459 (13%), Positives = 132/459 (28%), Gaps = 59/459 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + + Sbjct: 14 ESDLLSIRPLGAGQEVGRSCIMLEF----KGKRIMLDCGI---HPGLSGMDA-LPFVDLV 65 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + + + I Sbjct: 66 E--ADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIA 123 Query: 120 C-----------ISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVH 162 S + ++ + H + +I I++ Sbjct: 124 TEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGH-VLGAAMFMIEIAGVKILY 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L I N L+ +ST ++ + + + Sbjct: 183 TGDFSRQEDRHLMA-------AEIPNIHPDVLITESTYGTHIHEKREDRE-GRFTNLVHE 234 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 ++ R + ++ I ++ + SSL + + Sbjct: 235 IVNRGGRCLIPVFALGRAQELLLILDEYWGQHSELHEIPIYYASSLAKKCMAVYQTYVNA 294 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + E P + LSR + Sbjct: 295 MNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDA 354 Query: 325 KDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQW 382 K+ VI + + G I + + + + + + S H + Sbjct: 355 KNGVIIAGYCVEGTLAKGILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRI 414 Query: 383 IRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 ++P +V +HGE L + + Sbjct: 415 LKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHN 453 >gi|257389168|ref|YP_003178941.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257171475|gb|ACV49234.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 634 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 71/446 (15%), Positives = 145/446 (32%), Gaps = 70/446 (15%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M ++E + LGG E+G N + + ++IDCG P +++ Sbjct: 176 MSDDEYVRITMLGGCREVGRNAFIL----STPESRVLIDCGDVPGSSQQPYLEI----PE 227 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------- 111 + A+ +THAH DH G + L+ + P+Y + LL + Sbjct: 228 AFGAGANGIDAVVLTHAHLDHSGLVPLLFEYGYDGPIYCTEPTRDLLGLLTLDALDATTG 287 Query: 112 ERVSKKI----------PCISFQAGDKVDVGA-FSIESVRVNHSIPET-MALVIRSPVGN 159 E + I+ + GD D+ + H++ I + N Sbjct: 288 EGHAPPYDSERVRDAIKHTITLEYGDVTDIAPDIKLTLHDAGHALGSAVTHFHIGDGLYN 347 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + +GD DD + T++ + L+ +ST R + ++ + + Sbjct: 348 VAFSGDIHYDDTRLFEGATNE-------FPRVETLVLESTYGGRNDYQTDREDAERKLLE 400 Query: 220 IM-KNAKGCVLVTTFSSSVSRIRSII---DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 ++ + V S +V R + ++ + A + G I + L ++ A V Sbjct: 401 LVRETHDRDGTVVVPSPAVGRSQELMLVLEAAMRAG-DIPEMPIYLDGMIWEATAVHTTY 459 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----------------M-- 317 + L + + + + A L+ GE Sbjct: 460 PEFLREDLRDRIFDEADNPFLADAFEPVDGDADRAALADGEPGIVLAPDGMVTGGPVHSW 519 Query: 318 -RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGH 370 ++ T+ G I+N + + E + V SGH Sbjct: 520 LEHLAGDADSTLAMLGYQASG--TLGRRIRNGWDDLPIGDGGETVSLDMRVESVDGFSGH 577 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGE 394 L+ + + P+ ++ +HG+ Sbjct: 578 ADRQGLENFVRTMNPSPEKVLCVHGD 603 >gi|320101491|ref|YP_004177083.1| RNA-metabolising metallo-beta-lactamase [Desulfurococcus mucosus DSM 2162] gi|319753843|gb|ADV65601.1| RNA-metabolising metallo-beta-lactamase [Desulfurococcus mucosus DSM 2162] Length = 424 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 66/451 (14%), Positives = 145/451 (32%), Gaps = 60/451 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E+G L GS ++D GV+F + D+P P Sbjct: 1 MKIKVLGGGREVGRAAYLVEDGSQR----FLLDYGVNFDERDMP----RLPQ----HVRP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 ++ + ++HAH DH GA L+ +++ + + K + + Sbjct: 49 VDVSGLIVSHAHLDHVGAAPYLYITGRPKAFSTKPTLEVARLLTMDFLKLNAAVIEYDMR 108 Query: 120 CISFQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + V + F + H I ++ + +++TGD + Sbjct: 109 EFENLYDNTVFLDYGETYEEDGFKLVFANAGHIIGSSITYLETGSGRRLMYTGDINDRET 168 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCV 228 L G+ ++ +ST R ++K + +I++ KG V Sbjct: 169 WTLPG-------AETLETGVETVIVESTYGGRNH--PPRHVVEKRLLEIVEETIDRKGTV 219 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS--VAIDVGIIKKDQLFLSDE-- 284 L+ FS V R + I + I + + + ++ ++ LF Sbjct: 220 LIPAFS--VGRSQEIAALIASEAPYIEVYLDGMIKDITDIYLRYRKYLRDPALFNKVFET 277 Query: 285 --------SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + ++IA+ + ++ L + + ++++I S P Sbjct: 278 VNFVTGTRDRKKIINKPCVIIASAGMLKGGPSVYYL-----KKLHQNPRNSIIMVSYQAP 332 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGE 394 N ++ + + + S H L + + + ++ +HG Sbjct: 333 -NSNGHKLLEAGEIPELEVGRVNARVEWLDFSSHAGQKGLVDILSRYKSTVRDIIIVHGG 391 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 + +E L+E + V + Sbjct: 392 EEEAFSLREAILEELGSDVRIHVPNTGDEID 422 >gi|170595519|ref|XP_001902415.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia malayi] gi|158589929|gb|EDP28737.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia malayi] Length = 589 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 62/436 (14%), Positives = 134/436 (30%), Gaps = 58/436 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-- 62 E+ +PLG ++G + L G + +M+DCG+ D + FPD +FI Sbjct: 3 EIKVVPLGAGRDVGRSCILVSIGGRN----VMLDCGMHMGYSD----ERRFPDFSFINGG 54 Query: 63 -KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L + ITH H DH G+L + P+Y + + R + Sbjct: 55 GSLTEFLDCVIITHFHLDHCGSLPHMSEVVGYDGPIYMTYPTKAIAPVLLEDYRKVQTEF 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + + +N + I +++ Sbjct: 115 KGDKNFFTSQMIKNCMKKVIAINIHEKIDVDNELSIRAFYAGHVLGAAMFQIMVGSESVL 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ D + L+ +ST A R+ E+ K ++D Sbjct: 175 YTGDFNTTPDRH------LGAARVEPGLKPDLLISESTYATTIRDSKRARERDFLKKVHD 228 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 + N G VL+ F+ + R + + + E I ++ Sbjct: 229 TVSNG-GKVLIPVFA--LGRAQELCILLESYWERMNLKYPIFFSQGLAEKANQYYRLFIS 285 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEKDTVIFSS 332 +++ + ++ + + P L L Sbjct: 286 WTNEKIKRTFVERNMFDFKHIRPFEQSYIESPGPMVLFSTPGMLHGGQSLRVFTKWCSDE 345 Query: 333 R---AIPGN---EVAIGHIKNRLVEQGVRVIAEDAE---CPVHVSGHPYPNDLKRMYQWI 383 + +PG + + + + + + + S H + ++ + Sbjct: 346 KNLIIMPGFCVANTVGAKVISGMKKIEIAGRVREINLGVEYMSFSAHADAKGIMQLIRDC 405 Query: 384 RPQVLVAIHGEPLHLV 399 +P+ ++ +HGE + Sbjct: 406 QPRNVMFVHGEDAKME 421 >gi|14600511|ref|NP_147027.1| putative exonuclease [Aeropyrum pernix K1] gi|5103572|dbj|BAA79093.1| putative exonuclease [Aeropyrum pernix K1] Length = 420 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 37/274 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP-DITFIMKER 65 LG E+G L G +++D GV+F ++D P VFP D+ Sbjct: 3 RIRILGSGREVGRAAILVESGGRG----LLLDYGVNFDENDRP----VFPGDV-----RP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 ++L + +TH+H DH GA L+ V+ + + + K + Sbjct: 50 RDLDGLVLTHSHLDHIGAAPYLYVSQGPKVFGTRVTLHVSRLLLYDMIKLNGAYLPYDER 109 Query: 120 CISF--------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + G + + G F+ ++ H IP + A+++ I++T D + + Sbjct: 110 SVEDMLGTAEYIDYGREYEAGRFAFKTFYSGH-IPGSTAVLVEVDGRRILYTSDVNVIET 168 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 ++G + ++ +ST + S ++ +M V Sbjct: 169 KLVGP-------ARLEGAKADVVIVESTYGDSDHPPRSVSE-ERFYNAVMDVVSQGGTVL 220 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 + SVSR + I I + G + + + R V Sbjct: 221 VPAFSVSRGQEIAMILAERGFEYPVWLDGMIRQV 254 >gi|126465769|ref|YP_001040878.1| beta-lactamase domain-containing protein [Staphylothermus marinus F1] gi|126014592|gb|ABN69970.1| beta-lactamase domain protein [Staphylothermus marinus F1] Length = 427 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 78/431 (18%), Positives = 145/431 (33%), Gaps = 49/431 (11%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G L + K ++D GV+F ++D P FP + L Sbjct: 7 LGGGNEVGRAAYLV----VDNNKKFLLDYGVNFDEEDHP----QFP----LHVRPIELSG 54 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIPCISFQ 124 + ITHAH DH GA L+ V+ + + + + K + I Sbjct: 55 LAITHAHLDHIGAAPLLYITGKPRVFVTKPTLEIGKLLISDFLKLNAYYIDYSIEEFEVM 114 Query: 125 AGDKVDV--------GAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILG 175 A + + F I H I + + + +P I++TGD L Sbjct: 115 ASNAHFLEYGVEVENDGFKIIVTSAGH-ILGSAMIYLETPSGHRILYTGDVNTIQTWTLS 173 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + I L+ +ST +EK + I ++ + G VL+ F Sbjct: 174 R-------AELWPLKIDTLIIESTYGSTKHPPRHYTEKRLVDAIEEVTD-SGGTVLIPAF 225 Query: 234 SSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S V R + ++ + + + L G S + ++ LF + R Sbjct: 226 S--VGRSQEVMCLVQAELPHLDVYLDGMSREITNIYLRHKSFLRDPSLFEKAVQNTFFIR 283 Query: 292 EQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 + + A + +G ++ + K+ V S P + I + Sbjct: 284 GWQDRRKAWKKPGVIISSAGMLKGGPSVYYLKKIANEPKNAVFLVSYQAPNSPGHIILER 343 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKEL 404 E G+ + +S H + L + Q + + ++ +HGEP + Sbjct: 344 GIYEEFGLDEPIKARLEWFDLSSHAGKDGLISIIQRYKNTLKNIIIVHGEPDSASNLASM 403 Query: 405 ALQEGIACVPP 415 A++ + Sbjct: 404 AVEFLGNDINI 414 >gi|255513337|gb|EET89603.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 418 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 141/447 (31%), Gaps = 82/447 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG E+G + L ++ IM+D G+ + PD Sbjct: 1 MKLRF--LGGASEVGRSAILI-----DDQRRIMLDYGIKIDDVTDYPI--SIPD------ 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKI- 118 + A ++HAH DH G+L L+ + +P + + + LLE + + Sbjct: 46 ----IDAAVVSHAHLDHSGSLPLLYKDMSIPTFGTAPTLKLSNLLLEDSLKLFKKNHVPP 101 Query: 119 ------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV----GNIVH 162 IS + K++ + I H I + ++ P IV+ Sbjct: 102 KFHKRQLNDLLKHYISLEYRKKINFSNYDITLYDAGH-ITGSAITLVERPRGKDTKRIVY 160 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+K+ + I L+ +ST A + + IKK + +I Sbjct: 161 TGDFKITPQMLHAG-------AEIVKS--DLLIIESTYAGKSHPDRGDL-IKKFVAEIRD 210 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--IVLLGSSLKRVVSVAIDVGIIKKDQLF 280 + +V R + ++ + + G + G S V I L Sbjct: 211 VLDSGGNALVPAFAVGRSQELLAVLYKNGLADVTYVDGMSKSATSIVLEYQNYINNKNLL 270 Query: 281 ---------LSDESFGLYPREQ-LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + D Q +++ T L ++R L + + Sbjct: 271 NGAAKSVNWVEDYEMRNDALSQPSVILTTAGMLNGGPVLNYITR-------LNSRSKIFL 323 Query: 331 SSRAIPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + + G E +I N V V D S H NDL + Sbjct: 324 TGYQVDGTNGRLLLENKKLNIDNSKVAIKTPVSFYD------FSAHADNNDLYEFIEKSS 377 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGIA 411 P + +HG+ + E G Sbjct: 378 PNTIACVHGDSTRISEFVENLKGMGFD 404 >gi|226497180|ref|NP_001146407.1| hypothetical protein LOC100279987 [Zea mays] gi|219887045|gb|ACL53897.1| unknown [Zea mays] Length = 697 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 62/465 (13%), Positives = 133/465 (28%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 26 DQMVVTPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI--- 118 + + ITH H DH +L V+ + + + K+ Sbjct: 77 -PSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 135 Query: 119 --------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++V H + ++ I++TG Sbjct: 136 DMLYDESDIARSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 194 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST +++ I EK + I++ + Sbjct: 195 DYSREEDRHL-------RAAELPQFSPDICIIESTYGVQQHQPRIIREKRFTEVIHNTVS 247 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ ++ + + + Sbjct: 248 QG-GRVLIPAFA--LGRAQELLLILDEYWSKHPELHKIPIYYASPLAKRCMAVYQTYINS 304 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P + LSR + Sbjct: 305 MNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTDK 364 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ + + G NE + N L + + S H Sbjct: 365 KNACVIPGYVVEGTLAKTIINEPREVTLANGLTA-----PLHMSVHYISFSAHADFPQTS 419 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 +RP ++ +HGE ++L Q V Sbjct: 420 NFLDELRPPNIILVHGEANEMSRLKQKLITQFDGTNTKIVSPKNC 464 >gi|114576006|ref|XP_001154379.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 688 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 63/468 (13%), Positives = 145/468 (30%), Gaps = 73/468 (15%) Query: 2 KNEELVFLPL---GGVG-EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLV 54 ++++L+ PL GG G E+G + + + + IM+DCG+ + + P +DL+ Sbjct: 8 ESDQLLIRPLFKGGGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLI 63 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE 112 P + + I+H H DH GAL + + + Sbjct: 64 DP---------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 114 Query: 113 RVSKKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 I + + +V H + +I Sbjct: 115 VKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEI 173 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK- 214 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 AGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARF 226 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS 266 ++DI+ ++ ++ R + ++ I ++ + SSL + Sbjct: 227 CNTVHDIVNRGGRGLI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCM 283 Query: 267 VAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRG 315 + D++ + + + + + + P + LSR Sbjct: 284 AVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRE 343 Query: 316 EMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 + +++ VI + + G + + + G ++ + + + S H Sbjct: 344 LFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDY 403 Query: 374 NDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P ++ +HGE L + + Sbjct: 404 QQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 451 >gi|254168266|ref|ZP_04875112.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|254168398|ref|ZP_04875243.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|289595800|ref|YP_003482496.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei T469] gi|197622679|gb|EDY35249.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|197622775|gb|EDY35344.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|289533587|gb|ADD07934.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei T469] Length = 647 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 151/455 (33%), Gaps = 78/455 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD-------LVF 55 + + LGG E+G + L + +++DCG++ D D L Sbjct: 177 EQWVRVEALGGYREVGRSATLI----MTRTSRVLVDCGLNVAVSDK--ADPWSGAPYLYV 230 Query: 56 P---DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 P D + K K++ A+ +THAH DH G + L+ + PVY + L + Sbjct: 231 PEVWDASDPEKPFKHIDAVVVTHAHLDHVGLVPLLFKYNYDGPVYMTAPTRDLAAMLLID 290 Query: 112 E---------RVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-V 152 +V + I + + + H + +++ Sbjct: 291 YVKVAQSEGKKVPYESKHIKEMIKHTITLKYGETTDIAPDIRLTFHNAGHILGSSVSHFH 350 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 I + NIV TGD K + + + + ++ +ST RE S + Sbjct: 351 IGEGLYNIVITGDIKYERSWL--FNAAHNRFPR-----VETVIMESTYGGREDFQPSRRE 403 Query: 213 IKKNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSV 267 + + D++ G +L+ F+ V R + ++ + E ++ + L ++ Sbjct: 404 AAERLKDVVMRTYDKGGKILIPVFA--VGRSQEVMLVLESFMRNGELPEMPIYLDGMIWE 461 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIV---------------IATGSQGEPRSALAQL 312 A + + L +E + + + S + + + Sbjct: 462 ATTIHAAYPEYLNKDLRELIFQKKENPFLSPIFHRVESVERREEVISSSDPLIVLSTSGM 521 Query: 313 SRG-----EMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPV 365 G ++ ++T++F G +K L+ G + E + Sbjct: 522 MNGGPVLEYFKHWADDPRNTLVFVGYQAVGTLGRRIQNGLKEVLMSLGGKPFTVKVEMNI 581 Query: 366 ----HVSGHPYPNDLKRMYQWIRPQ--VLVAIHGE 394 SGH L + + P+ ++ HGE Sbjct: 582 ETIDGFSGHSDRRQLVQYISSMNPKPERVIICHGE 616 >gi|76800760|ref|YP_325768.1| mRNA 3'-end processing factor [Natronomonas pharaonis DSM 2160] gi|76556625|emb|CAI48196.1| predicted mRNA 3'-end processing factor [Natronomonas pharaonis DSM 2160] Length = 639 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 82/456 (17%), Positives = 150/456 (32%), Gaps = 85/456 (18%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-- 57 M ++E + LG E+G + + ++IDCG D PG + P Sbjct: 176 MSDDEWVRITTLGCCREVGRAAFIL----NTPETRVLIDCG------DKPGAEGEVPYLQ 225 Query: 58 -ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + NL A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 VPEALGAGASNLDAVVLTHAHLDHSALIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV 157 R CI + GD D+ + H I + Sbjct: 286 ASKEGRTPPYDSSQVREAIKHCIPLEYGDVTDIAPDLKLTFHNAGH-ILGSAVTHFHVGD 344 Query: 158 --GNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 N+ +GD DD + V D + L+ +ST R ++ + Sbjct: 345 GLYNVAFSGDIHYDDTRLFNGAVNDFPR--------VETLVLESTYGGRNDYQTDQEDSE 396 Query: 215 KNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQIGRK--IVLLGSSLKRVVSVAI 269 + + +I++ G VL+ F+ V R + I+ + E+ R+ I + L ++ A Sbjct: 397 ETLKEIIRETTTEGGKVLIPAFA--VGRSQEIMLVLEEAMREGEIPTVPVHLDGMIWEAT 454 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIV------IATGSQGE-------PRSALAQ----- 311 + + L + E + I G + P L+ Sbjct: 455 AIHTTYPEYLRDDLRDRIFHDDENPFLADQFNHIDGGEEERQEVADGGPCIVLSTSGMVE 514 Query: 312 ----LSRGEMRNVKLAEKDTVI-------FSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 +S + T + SR G + + +R +G + + Sbjct: 515 GGPIMSWLNHIGSEEKSTMTFVGYQAQGTLGSRIQSGWDEIPMN--DRGNGRGTLKLNMN 572 Query: 361 AECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 E SGH L + + RP+ ++ +HG+ Sbjct: 573 VETVDGFSGHADRQGLMNFVRTMNPRPEKVLCVHGD 608 >gi|159904868|ref|YP_001548530.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159886361|gb|ABX01298.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 433 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 141/442 (31%), Gaps = 49/442 (11%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + + + ++ DCGV ++ + + + N + Sbjct: 7 GGASEVGRSCVEV----KTEKSTVLFDCGVKLSHEES----------EYPILDNLNADCV 52 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVY---------ERVSKKIPCI 121 F +HAH DH G + L VP +YA+ + + + + + Sbjct: 53 FASHAHLDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGVEGQDIPYDRADV 112 Query: 122 SF--------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + + F E H IP + + + +V+TGD K+ D + Sbjct: 113 NKSLNLFRKARYNHPKNFKDFEFEFFNAGH-IPGSSTISLNYSGKRVVYTGDTKVSDTDL 171 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 D E I L+ +ST E K I I + + + Sbjct: 172 -VKGADLS----YTKEDIACLIVESTYGDTNQENREEAE-KNFINKIKETLERGGIPLVP 225 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVV-SVAIDVGIIKKDQLFLSDESFGL 288 +V R + I+ I + + + G + R++ + + + + Sbjct: 226 VFAVDRSQEILIILNRHDFGVPVYFDGMGRKITRIMLQYPAFLNHPDDLKAAFLNVTEVE 285 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN---EVAIGHI 345 I+ G + A + G + E +S G E A H+ Sbjct: 286 SKDRPKIIKEIRQNGGIIVSTAGMLEGGPIIPYITEFMKEPKNSLIFTGYQVEETAGRHL 345 Query: 346 KN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 +L V + S H ++L+ + + P+ LV HGE + K+ Sbjct: 346 LETGKLEIGEFDVEPKFEIASYQFSAHGEMDELRHIVKKANPETLVIQHGEEEVVNVFKD 405 Query: 404 LALQEGIACVPPVRNGKMLRLF 425 A+ EG R+ Sbjct: 406 WAVSEGFNENKVFAPKVGDRIN 427 >gi|124028414|ref|YP_001013734.1| exonuclease [Hyperthermus butylicus DSM 5456] gi|123979108|gb|ABM81389.1| predicted exonuclease [Hyperthermus butylicus DSM 5456] Length = 643 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 84/465 (18%), Positives = 146/465 (31%), Gaps = 75/465 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N + LGG E+G + L +S I++D G++ G +L +P + Sbjct: 175 ENRYVRITALGGFMEVGRSAILIE----TSESKILLDVGIN---PSGIGYNL-YPRLDID 226 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAK-------RVYER 113 + L A+ +THAH DH G + L+ + PVYA+ L+ Sbjct: 227 QLNLEELDAVVVTHAHLDHIGLVPYLFKYGYRGPVYATKPTRDLMVLLLLDLLDIMQRSG 286 Query: 114 VSKKIPCISFQAGDKVDVG-----------AFSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + + + H + +A I + NIV Sbjct: 287 QKPPYTQQEVKKMILHTIPLDYGEVTDIAPDMKLTFYNAGHILGSAIAHIHIGEGLHNIV 346 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDI 220 +TGD+K +L + L+ +ST R+ E ++ ++ Sbjct: 347 YTGDFKFGRTRLLDK-------AHTEFPRVETLIMESTYGDRDQPRRDEAELELISVISK 399 Query: 221 MKNAKGCVLVTTFSSSVSRIRSI--------------------IDIAEQIGRKIVLLGSS 260 +G VL+ + V R + I ID + + I L Sbjct: 400 TIARRGKVLIPVMA--VGRAQEILLVLVDALRKKLLPPETKIYIDGSIKEVTAIHLTYPE 457 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM--- 317 L A + G RE + + G + L+ G Sbjct: 458 LLSAQVRARILRGENPFDHENIVRVEGRQMRED--IAKSDEPGVILATAGMLTGGPSVEY 515 Query: 318 -RNVKLAEKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 R + ++ ++F S G E I + Q VR+ E S Sbjct: 516 LRLLAPDPRNVLVFVSYQAKGTLGRRILDGEREITMVDEEGKPQLVRIQMEVKSIDGF-S 574 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 GH L + +P+ ++ HGEP + A E + Sbjct: 575 GHSDRRQLLAFLANMKPKPKNIILNHGEPQSIHALAETIRRRARH 619 >gi|297527491|ref|YP_003669515.1| KH-domain/beta-lactamase-domain protein [Staphylothermus hellenicus DSM 12710] gi|297256407|gb|ADI32616.1| KH-domain/beta-lactamase-domain protein [Staphylothermus hellenicus DSM 12710] Length = 647 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 75/456 (16%), Positives = 149/456 (32%), Gaps = 66/456 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG E+G + L + +++D G++ F DI + Sbjct: 178 KNNYVRITALGGFMEVGRSAILVE----TRESRVLLDLGINVGAGTDYNRAYPFIDIDQL 233 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 L A+ +THAH DH G + L+ + P+Y + L+E + Sbjct: 234 --NLSELDAVIVTHAHLDHIGLVPLLYKYGYRGPLYVTKPTRELMVIMIKDLIEVTQREG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I + GD DV + H + + I + NIV Sbjct: 292 KYLPYSEKDLMTAILHTIPLEYGDVTDVAPDIKVTMYNAGHILGSAIVHLHIGMGLHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+K +L + L+ +ST E + I + Sbjct: 352 YTGDFKYAPTRLLNR-------AEDKFPRVETLIMESTYGATRQQSRREAE-AELIKIVK 403 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII 274 K + +V +V R + I+ + + + G + + Sbjct: 404 KTIERKGIVLIPVFAVGRGQEIMLVLNDAINNGLIPKVDVFIEGLVNEVTAIHTQYPEYL 463 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE---------PRSALAQLSRGEM----RNVK 321 ++ + + + +I G+ + L+ G + + Sbjct: 464 NRNIKEMIYRGENPFTADYFHIIEGGTARPDIVETRPSIIIATSGMLTGGPAVEYLKLIA 523 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH--------VSGHPYP 373 +++++F G IK+ + E V + ++ SGH Sbjct: 524 SDPRNSLVFVGYQAEG--TLGRRIKDGMRELQTVVDNKVEIIRINLEVYSIDGFSGHSDQ 581 Query: 374 NDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 ++L R + I +P+ ++ HGEP ++ L + Sbjct: 582 SELLRYVRNISPKPRNIILNHGEPSAIMTLARLVSK 617 >gi|223647718|gb|ACN10617.1| Integrator complex subunit 11 [Salmo salar] Length = 343 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 114/349 (32%), Gaps = 53/349 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L G + IM+DCG+ +D D FPD ++I ++ Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIGGKN----IMLDCGMHMGFND----DRRFPDFSYITQQ 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L + I+H H DH GAL + P+Y + + R Sbjct: 55 GRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V +N + + I+ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHVLGAAMVQIKVGSESVV 174 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG I L+ +ST A R+ E+ K +++ Sbjct: 175 YTGDYNMTPDRHLGA-------AWIDKCRPDILISESTYATTIRDSKRCRERDFLKKVHE 227 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + + + E I ++ Sbjct: 228 TVERG-GKVLIPVFA--LGRAQELCILLETFWERMNMKAPIYFSTGLTEKANHYYKLFIT 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 ++ + ++ + + P + ++ + Sbjct: 285 WTNQKIRKTFVQRNMFEFKHIKAFDRSYADNPGP----MVEKHHHHICM 329 >gi|119719226|ref|YP_919721.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119524346|gb|ABL77718.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 639 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 86/489 (17%), Positives = 159/489 (32%), Gaps = 87/489 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFI 61 + + + LG E+G + L + I++D G+ D+LP DL P+ Sbjct: 178 DRVRIVSLGAFHEVGRSAVLV----QTPEANILLDAGLKPTGNGDELPLFDL--PEFD-- 229 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK--- 117 ++L A+ ITHAH DH GAL L+ + PVY + + L + + Sbjct: 230 ---LESLDAVVITHAHLDHVGALPVLFKYGYKGPVYMTEPTLHLSKLLFEDYIKVAQREG 286 Query: 118 --------------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + + G+ D+ + R H + M I + NIV Sbjct: 287 KNELYSMRDVNSLLLNTYTLSYGEVTDIAPEIRLTFYRAGHILGSAMVHLHIGEGLINIV 346 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD K +L +K L+ +ST + SE K + I+ Sbjct: 347 YTGDMKYARTMLLDPAYNKFPRAE-------VLIIESTYGSKSDVLPSEDDAKLELAKIV 399 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 KG VL+ + V R + ++ + I + G + Sbjct: 400 LETIERKGVVLIPVLA--VGRAQEVLLALLDLMKKGAVPRVPIFIEGMIDEVSAVHMTFP 457 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATG-----SQGEPRSALAQLSR-------GEMRN 319 + + + E + VI ++ +P LA +R Sbjct: 458 EYLSATIREMIYRDENPFTSENIHVIRGEAREDITEKKPSIILATSGMLTGGPVLDYLRI 517 Query: 320 VKLAEKDTVIFSSRAIPG--------------NEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + E +++F S + G G + N+ ++ V + Sbjct: 518 LADDENSSLVFVSYQVEGTLGRKILQGLRKLSFTDPSGKVINKDLKMRVYRVEG------ 571 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 SGH L+ + + P+ ++ HGE + + E + + Sbjct: 572 -FSGHSDRRQLEAFIRRMEPSPRTVILNHGEAGKIEEFRRYLSSEWFKKKTGLNLDVLTP 630 Query: 424 LFPDPIEII 432 + I I+ Sbjct: 631 KNAESIRIV 639 >gi|307595786|ref|YP_003902103.1| KH-domain/beta-lactamase-domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550987|gb|ADN51052.1| KH-domain/beta-lactamase-domain protein [Vulcanisaeta distributa DSM 14429] Length = 643 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 150/460 (32%), Gaps = 83/460 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 K+ + LG E+G + L + I++DCGV D+ P +D V Sbjct: 181 KDARITVTGLGAQMEVGRSAILVR----TKESSILLDCGVKPSSSGDEAPLLDEV----- 231 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE------ 112 + L A+ ITHAH DH G + L+ + PVY + L+E Sbjct: 232 ----DLDTLDAVVITHAHMDHIGYVPYLFKYGYKGPVYMTEPTKYLMEVLLTDYIEQAES 287 Query: 113 -------------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL-VIRSPVG 158 + +++ + H + + I + + Sbjct: 288 EGRVPPYSRQDLAQALYHTITLNYADHPTDISPDTKLMLFDGGHEVGSAVVHLHIGNGLY 347 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 NI++TGD K +L +K + L+ +ST +E + ++ + Sbjct: 348 NIIYTGDMKYGPTRLLNPAHNKFKRAEL-------LIMESTYGGKEDVQPPRQESEQKLI 400 Query: 219 DIMKN---AKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVA 268 D++K+ +G VL+ FS+ R + I+ + + I + G L+ + Sbjct: 401 DLVKHTVEHEGKVLIPVFST--GRAQEILLVLNEAINNKQLPKIPIYVDGMVLETLNVHL 458 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS-ALAQLSRG-------EMRNV 320 + + + + + + E + I E R + ++ +G + Sbjct: 459 MFPDYLNRALREMIYDGVNPFLSEYVKPIERARDPEKRKEQVMEILQGPPAVILAPHGML 518 Query: 321 KLAEKDTVIFSSRAIPGN---------EVAIGHIKNRLVEQGVRVIAED---------AE 362 + N E IG + + D E Sbjct: 519 NGGPIMDYFVHAAEDERNMLIFVSYQAENTIGRRIQQGERKLTVRYYSDRVTLDIKMKVE 578 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVA 400 SGH L + + P+ ++ +HGEP ++ Sbjct: 579 SIPGFSGHSDRRQLINYVRNMEPKPHKIMLVHGEPSKIMN 618 >gi|224140919|ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|222866826|gb|EEF03957.1| predicted protein [Populus trichocarpa] Length = 699 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 62/465 (13%), Positives = 135/465 (29%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L PLG E+G + + K ++ DCG+ + P I Sbjct: 23 DQLTLTPLGAGNEVGRSCVYMSF----KGKTVLFDCGIHPAYSGM----AALPYFDEID- 73 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL---------------LE 106 + + +TH H DH +L V+ + + +E Sbjct: 74 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLLLTDYVKVSKVSVE 132 Query: 107 AKRVYERVSKKIPCI--SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 E+ + VDV H + ++ +++TG Sbjct: 133 DMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 191 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST ++ I EK I+ + Sbjct: 192 DYSREEDRHL-------RAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHSTIS 244 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGII 274 G VL+ F+ + R + ++ I ++ + K+ ++V + Sbjct: 245 LG-GRVLIPAFA--LGRAQELLLILDEYWSNHPELHNIPVYYASPLAKKCMTVYQTYILS 301 Query: 275 KKDQLFLSDESFGLYPREQLIVIA----------TGSQGEPRSALAQLSRGEMRNVKLAE 324 +++ + + + + + P + LSR + Sbjct: 302 MNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLSRQLFDMWCSDK 361 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ + + G NE + N L + + S H Sbjct: 362 KNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHY-----ISFSAHADYAQTS 416 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + K +L + + Sbjct: 417 TFLKELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNC 461 >gi|300867486|ref|ZP_07112137.1| hypothetical protein OSCI_3400008 [Oscillatoria sp. PCC 6506] gi|300334480|emb|CBN57305.1| hypothetical protein OSCI_3400008 [Oscillatoria sp. PCC 6506] Length = 871 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 71/472 (15%), Positives = 143/472 (30%), Gaps = 74/472 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N LV PLG IG + G +++DCG D P + ++ Sbjct: 297 ENTHLVVTPLGAARGIGASCFRIEIGPYE----VVLDCGSRPKGYDPL------PALEYL 346 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 N + ++HAH DH GA+ + V + + + + + Sbjct: 347 ----NNPDLLIVSHAHLDHLGAVPVFHNRYPGVRIICTQGTREIAHIMLRDCLKVQSLNE 402 Query: 121 ISFQAGDKVDVG-------------------AFSIESVRVNHSIPETMALVIRSPVGNIV 161 S D VD+ + + H I + + +++ Sbjct: 403 DSTPLFDDVDLERTLFRLETQPVGVDFEPLPGLKVRFINAGH-ILGAACIYMTCGERSLI 461 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + T L + IL G E + I +++ Sbjct: 462 YTGDY----NTTSSRTTTGLRLADLPQADILITESTYGGDTHPGRKTQETALIDAIAEVV 517 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLG--SSLKRVVSVAIDVGI 273 K + G VL+ F+ + R + I+ + + G S V D Sbjct: 518 K-SGGNVLIPAFA--LGRAQEILLAIRTSTTFHTLKVPVYVDGLVRS---VTETFRDNLD 571 Query: 274 IKKDQLFLSDESFGLYPREQL-----IVIATGSQGEPRSA--------LAQLSRGEMRNV 320 + D + + P L I+ + P + + + G Sbjct: 572 LLPDSVKNFVKQCNREPFFDLNGMPPIIPIGNPKERPLAMAKPSVIVASSGMLSGGASVY 631 Query: 321 KLAEKDTVIFSSRAIPGN--EVAIGHIK------NRLVEQGVRVIAEDAECPVHVSGHPY 372 ++ I G E + G + + + G ++ + ++S H Sbjct: 632 YAKTLLERENAAIFISGYTDEESPGRLLQNLAVGDEIELDGKKITVKAQIKRFNLSAHAD 691 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 L ++ + P+ L+ IHG L + + + + G+ + Sbjct: 692 KIGLTQVINKVNPKHLILIHGCGNALHSLADSGDLKSKHYIHIPNVGERVEY 743 >gi|27372065|gb|AAN87883.1| FEG protein [Arabidopsis thaliana] Length = 613 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 150/448 (33%), Gaps = 66/448 (14%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG EIG + + + K IM DCG+ DD +P+ + I K Sbjct: 8 LGAGQEIGKSCVVV----TINGKKIMFDCGMHMGCDDHN----RYPNFSLISKSGDFDNA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER----------VS 115 + I ITH H DH GAL + P+Y S L R Sbjct: 60 ISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEEL 119 Query: 116 KKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I+ + + I + H + + + + IV+TGD+ Sbjct: 120 FTTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH-VLGAVMVYAKMGDAAIVYTGDY 178 Query: 167 KLDDDAILGDVTDKDS-LCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKN 223 + TD+ I + L+ +ST A R E+ + ++ + Sbjct: 179 NM--------TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAG 230 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGSS-------LKRVVSVAIDVG 272 G L+ +F+ + R + + + + K+ + SS + + ++ Sbjct: 231 G-GKALIPSFA--LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQ 287 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTV 328 +K+ + F +I + L G ++ + + V Sbjct: 288 NVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFAIPGMLCAGLSLEVFKHWAPSPLNLV 347 Query: 329 ---IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 +S G+++ G + G +V V S H + + +++ P Sbjct: 348 ALLGYSVAGTVGHKLMAGKPTTVDLHNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSP 407 Query: 386 QVLVAIHGE-PLHLVAHKELALQEGIAC 412 + +V +HGE P ++ +++ + I C Sbjct: 408 KNVVLVHGEKPSMMILKEKITSELDIPC 435 >gi|322370262|ref|ZP_08044824.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] gi|320550598|gb|EFW92250.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] Length = 422 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 67/426 (15%), Positives = 132/426 (30%), Gaps = 80/426 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E+G + L +++D G+ V V PD Sbjct: 1 MNIQFLGGAHEVGRSAILV-------NDSLLLDYGMLTGNPPQYPVGDVNPD-------- 45 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIG----LLEAKRVYERVSKKIPC 120 A+ ++H H DH G L L S P++ +P L S P Sbjct: 46 ----AVVVSHGHLDHVGILPSLLSGDDRPPIHWTPPTYELTRILARDTLKLHGGSYDCPF 101 Query: 121 IS------------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + I H IP + +++ +++T D+ Sbjct: 102 TEAELKRVTQVSEPHGYRKSFEAAGHEITFYNAGH-IPGSAHVLVDDGETRLLYTADFHT 160 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKG 226 D +L T ++C+ST + E +E+ +++ + G Sbjct: 161 GDQRLLSGTT--------ARPDADVVLCESTYSDVEHDERAATEREFAESVKTTIWEG-G 211 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS---- 282 V+V F+ + R + ++ + E + G K+V + +D L Sbjct: 212 TVVVPAFA--IGRTQEMLMVCEAHDIDCYVDGMG-KQVTRMLRQHPEFVRDPDALQRAIS 268 Query: 283 --------DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + R+ +++ T A+ + ++ + + + Sbjct: 269 NARFVTGRNGQRKRIARKNTVIVTTSGMLSGGPAMTYI-----PEIRANPVNKITMTGYQ 323 Query: 335 IPGN------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVL 388 + G E G I R++ +V + D S H + L R + Sbjct: 324 VEGTPGRDLLETGRGEIDGRVMPVSAQVESYD------FSAHADRDGLLEFLDSYRDATV 377 Query: 389 VAIHGE 394 + HG+ Sbjct: 378 LVNHGD 383 >gi|147787280|emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] Length = 687 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 64/469 (13%), Positives = 133/469 (28%), Gaps = 81/469 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + Y K I+ DCG+ + P I Sbjct: 15 DQLIITPLGAGNEVGRSCVYMSY----KGKTILFDCGIHPAYSGM----AALPYFDEID- 65 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 66 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 124 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 125 DMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 183 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST ++ + EK I+ + Sbjct: 184 DYSREEDRHL-------RAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTIS 236 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVL--------------LGSS 260 G VL+ F+ + R + ++ I ++ I +S Sbjct: 237 QG-GRVLIPAFA--LGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINS 293 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 + + + +S + V+ P + LSR Sbjct: 294 MNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVV----MASPSGLQSGLSRQLFDMW 349 Query: 321 KLAEKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 +K+ + + G NE + N L + + S H Sbjct: 350 CSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHY-----ISFSAHADF 404 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + K +L Q + Sbjct: 405 AQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNC 453 >gi|14520957|ref|NP_126432.1| mRNA 3'-end processing factor, putative [Pyrococcus abyssi GE5] gi|5458174|emb|CAB49663.1| Cleavage and polyadenylation specficity factor [Pyrococcus abyssi GE5] Length = 651 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 82/475 (17%), Positives = 158/475 (33%), Gaps = 80/475 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-----PKDDLPGVDLVFP 56 K+ + LGG E+G + L + ++++D GV+ P P D P Sbjct: 185 KSRWIRITGLGGFREVGRSALLV----QTDESYVLVDFGVNVAALNDPYKAFPHFDA--P 238 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFA---IGLLEAKRVY 111 + +++KE L AI ITHAH DH G L L+ + P+Y +P + LL+ + Sbjct: 239 EFQYVLKEGL-LDAIIITHAHLDHSGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIE 297 Query: 112 ERVSKKI--------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRS 155 + S I+ G+ D+ + H + + I + Sbjct: 298 IQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGN 357 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + NI TGD+K +L + L+ +ST + + +K Sbjct: 358 GLHNIAITGDFKFIPTRLLEPAN--AKFPRL-----ETLVMESTYGGANDIQMPREEAEK 410 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-SLKRVVSVAIDV 271 + +++ G VL+ + V R + ++ + E R + L ++ A + Sbjct: 411 RLIEVIHQTLKRGGKVLIPAMA--VGRAQEVMMVLEDYARIGAIDAPIYLDGMIWEATAI 468 Query: 272 GIIKKD----------------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 + +E+ +I + ++ L G Sbjct: 469 HTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSKERQDIIDSNEPAIIIASSGMLVGG 528 Query: 316 ----EMRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECP 364 + + ++++IF S G V + V + + Sbjct: 529 PSVEYFKQLAPDPRNSIIFVSYQAEGTLGRQVQSGVREIPMVGEEGRTEVIKVNMEVHTI 588 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHL-----VAHKELALQEGIAC 412 SGH +L +RP+ ++ +HGEP H++ L Sbjct: 589 DGFSGHADRRELMNYVAKVRPRPERVITVHGEPQKCLDLATSIHRKFGLSTRAPN 643 >gi|302832928|ref|XP_002948028.1| hypothetical protein VOLCADRAFT_79885 [Volvox carteri f. nagariensis] gi|300266830|gb|EFJ51016.1| hypothetical protein VOLCADRAFT_79885 [Volvox carteri f. nagariensis] Length = 728 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 134/445 (30%), Gaps = 67/445 (15%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPK-DDLPGVDLVFPDITFIMKE 64 +PLG E+G + + Y K +M DCG+ +F D LP +D + DI Sbjct: 26 IIPLGAGSEVGRSCIILKY----QDKTVMFDCGIHPAFKGMDSLPLLDDI--DIA----- 74 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLL----------------E 106 + ITH H DH A+ L ++ + + E Sbjct: 75 --TVDVALITHFHLDHCAAVPYLLRKTRFKGRIFMTHPTKAIYYSLLRDLAKGAKHSSEE 132 Query: 107 AKRVYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 A E + + I ++V I R H + ++ ++TGD Sbjct: 133 ALFNEEDLDASMEQIEVVDFYQTIEVSGMQITPYRAGH-VLGAAMFMVEVAGLRCLYTGD 191 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 + D L ++ +ST ++ + I +I Sbjct: 192 YSRLPDRHLPG-------ADTPPVTPHIVIVESTYGTSRHLPRQQRE-QLLIDNIRTTLN 243 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQI---------GRKIVLLGSSLKRVVSVAIDVGIIKK 276 V ++ R + ++ + ++ G I S + + + V Sbjct: 244 RGGRVLMPIVALGRAQELLLLLDEYWEAHKSELGGIPIYQASSMMSKALGVYQTYVESLN 303 Query: 277 DQLFLSDESFGLYPREQL--------IVIATGSQGEPRSALAQLSRGEMRN----VKLAE 324 + + + + + + + L G R+ Sbjct: 304 EDIKKVFHDRNPFKFRHVQTLKNPAHFIADYSGPCVIMATPSGLQSGASRDFFEAWCEDA 363 Query: 325 KDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 ++T I A+ G + +G + +G RV A + S H + Sbjct: 364 RNTCIICDFAVQGTLAKEILGGPSSITTREGRRVPLRIAVHNISFSAHADFDQTSGFLDT 423 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQ 407 ++P +V +HGE + + Sbjct: 424 VKPPHVVLVHGEYGEMRKLAKALKD 448 >gi|297265405|ref|XP_002799184.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3-like [Macaca mulatta] Length = 564 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 43/235 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR 221 >gi|332797143|ref|YP_004458643.1| beta-lactamase domain-containing protein [Acidianus hospitalis W1] gi|332694878|gb|AEE94345.1| beta-lactamase domain protein [Acidianus hospitalis W1] Length = 421 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 141/440 (32%), Gaps = 52/440 (11%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDLVFPDITFIMKERKNLM 69 LGG E+G I++D GV+F P D P+ + + + Sbjct: 8 LGGGQEVGR----AAIEVTGPDGSIVLDYGVNFNPDDT--------PNFP-LQEMPSKVK 54 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIPCIS--- 122 A ++HAH DH GAL P+Y + +L+ + Sbjct: 55 AFIVSHAHLDHVGALPIYQISGSKPIYGTSITKEIGELILKDFLKISGPRVPYEWVEVKK 114 Query: 123 -------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ +VG+F I++ H IP + V+++ G++ +TGD + + + Sbjct: 115 TLDNFNTIKYNEEFEVGSFRIKTSSAGH-IPGSAITVVKTNKGDVTYTGDINITNTKL-M 172 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D D + + ++ E I ++++ G VLV FS Sbjct: 173 KPADLDIMR---DSRVIVTEATYGKFNHPQRKSVEDEFYNAIMEVLEEG-GTVLVPAFS- 227 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +SR + I+ + + + + + + + I+ + ++++ + Sbjct: 228 -LSRSQEILSLLAERNIPYPVYYDGMVKTI-----MEIMINNPEYINNYEALKKAYNEFH 281 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN----------EVAIGHI 345 + + + +K P N + Sbjct: 282 YVNGLQDRKKAYKSNGVIVASAGMLKGGPAVYYFKKIADNPKNAVFLVSYQADNTPGRKL 341 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKEL 404 + + S H + L ++ + + + +V +H + Sbjct: 342 LELGKFDEESPLLKARLQLFDFSSHAGRDQLMQILKASKSLEKVVVVHSSADSAQYFADH 401 Query: 405 ALQEGIACVPPVRNGKMLRL 424 QE V NG+ ++L Sbjct: 402 VKQELGVEVIVPENGQEIQL 421 >gi|85713743|ref|ZP_01044733.1| metallo-beta-lactamase family protein [Nitrobacter sp. Nb-311A] gi|85699647|gb|EAQ37514.1| metallo-beta-lactamase family protein [Nitrobacter sp. Nb-311A] Length = 415 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 128/350 (36%), Gaps = 36/350 (10%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQ 124 +L+ + ++H H DH+G + +PV + +L+A + + F Sbjct: 54 DDLLGLVLSHGHVDHWGLAP--LAGPDLPVALGAATLRILQAAAPFVPRPYVPARPVEFT 111 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 +G + G F + V+HS + A+ + + + ++GD + + L Sbjct: 112 SGTTLQFGPFRVTPHLVDHSAYDAHAIEVEAGGKRLFYSGDIR----GHGRKAALFEKLV 167 Query: 185 AIGNEGILALMCDSTNAMREGT---CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + E + ++ + ++ R +E +++ + ++ AKG LV + ++ R+ Sbjct: 168 SDPPENVDVMLMEGSSFGRLDPDLSFPTESEVEQRLVELFGEAKGLALVAASAQNIDRMV 227 Query: 242 SIIDIAEQIGRKIVL--LGSSLKRVVSVAI-DVGIIKKDQLFLSDESFGLYPRE-QLIVI 297 S+ ++ GR +++ + + R L++ R + ++ Sbjct: 228 SLYRACKRTGRTLIIDLYTAEMLRATDNTHIPQSNWPGVALYIPQYQRVQIKRSGRFDLL 287 Query: 298 ATGSQGEPR-----------SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN---EVAIG 343 + + L + + + + + G E Sbjct: 288 DHHATHRIFGEGLTEIAPNAAMLFRSAMLSDLD-RAGCLSGAVAIWSQWSGYLAQERGRA 346 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + L ++ + ++ H SGH DLKR+ + + P++LV +H Sbjct: 347 -LMAELAQRDIPLVHA------HTSGHASIKDLKRLARAVAPKMLVPVHT 389 >gi|119872072|ref|YP_930079.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673480|gb|ABL87736.1| beta-lactamase domain protein [Pyrobaculum islandicum DSM 4184] Length = 430 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 157/437 (35%), Gaps = 45/437 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG GE+G ++ I++D GVSF P VFP + Sbjct: 1 MKIRF--LGGAGEVGR----LAVFLKTASNGILLDYGVSFDAQGRP----VFP----LHI 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKR-------- 109 ++L A+F++HAH DH G L L+ P+Y++ + L + K Sbjct: 47 RPRDLTAVFLSHAHLDHSGGLPLLYISSRTPIYSTSLTMELSDLMYTDAIKLSGYYLPYT 106 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 E I G+ V++G ++ ++ IP + V+ +V TGD+ Sbjct: 107 QEEVRETMASAIPLIYGEPVEIGRDAVLTIYNAGHIPGSAIGVVEVEGWVVVFTGDFNTV 166 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 D +L D +L + ++ ++T A + EK + I + + +G Sbjct: 167 DTNLL-RGADVYNL----PKNPDVIIMEATYASTDHP-PREKLERDFIQAVRETLEGGGS 220 Query: 230 VTTFSSSVSRIRSIIDIAEQIGR---KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 V S ++ R + I+ + G I + G + + +A +++ L+ Sbjct: 221 VLIPSFALGRAQEILLTLVKHGVDKYPIYIDGLARQINQIIARYPHLLRDPGLYKKALEV 280 Query: 287 G-LYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTVIFSSRAIPGNEVA 341 P + A + L G + + +K+ + S P N Sbjct: 281 AIEVPSAYVRKGALEEHSVIIAPAGMLKGGAALYYFKKMAQNKKNGIFLPSFQAP-NTPG 339 Query: 342 IGHIKNRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMY-QWIRPQVLVAIHGEPLHLV 399 + +I DA S H +L+ ++ R ++ +H +PL Sbjct: 340 FEILSKGYAVVDGTIIKVDARLEWFDFSAHAGRRELEHFIKRFSRDTKIILVHTDPLSAS 399 Query: 400 AHKELALQEGIACVPPV 416 + EG + Sbjct: 400 VLIRRLINEGYDNIYLP 416 >gi|134046233|ref|YP_001097718.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132663858|gb|ABO35504.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 433 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 149/444 (33%), Gaps = 53/444 (11%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + + + ++ DCGV ++ + + + N + Sbjct: 7 GGASEVGRSCVEV----KTEKSTVLFDCGVKLSHEES----------EYPILDNLNADCV 52 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVY---------ERVSKKIPCI 121 F +HAH DH G + L VP +YA+ + + + + + Sbjct: 53 FASHAHLDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIPYDKADV 112 Query: 122 SF--------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + F E H IP + + + +V+TGD K+ D + Sbjct: 113 NKSLNLFRKARYNHPKRFKDFEFEFFNAGH-IPGSSTISLNYGRKRVVYTGDTKVSDTDL 171 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 D E I L+ +ST E K I I + + + Sbjct: 172 -VKGADLS----YTKEDIACLIIESTYGDTNQEHREEAE-KNFINKIKETLERGGIALIP 225 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVVSV--AIDVGIIKKDQLFLSDESFG 287 +V R + I+ I + + + G + R++ A + FL+ Sbjct: 226 VFAVDRSQEILMILNRHDFGVPVYFDGMGRKITRIMLQYPAFLNHPDELKAAFLNVTEVE 285 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMR----NVKLAEKDTVIFSSRAIPGNEVAIG 343 R ++I + G S L G + K+++IF+ + E A Sbjct: 286 SKDRPKIIKEIRQNGGIIVSTAGMLEGGPIVPYITEFMKEPKNSLIFTGYQVE--ETAGR 343 Query: 344 HIKN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 H+ ++ V + S H ++L+++ + P+ LV HGE + Sbjct: 344 HLLETGKIEVGEFDVEPKFEIASYQFSAHGEMDELRQIVKKANPETLVIQHGEEEVVKTF 403 Query: 402 KELALQEGIACVPPVRNGKMLRLF 425 ++ A+ EG + ++ Sbjct: 404 RDWAVSEGFSESNVFAPKIGDKIN 427 >gi|269860830|ref|XP_002650133.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Enterocytozoon bieneusi H348] gi|220066453|gb|EED43934.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Enterocytozoon bieneusi H348] Length = 657 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 75/499 (15%), Positives = 149/499 (29%), Gaps = 66/499 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ PLG E+G + Y K ++DCGV GV P + I Sbjct: 7 KDQISIKPLGAGSEVGRSCIHIKY----QEKQFLMDCGV---HPAYTGV-SCLPFLDLI- 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + A+FITH H DH AL L VY + +L+ Sbjct: 58 -NLEEIDAVFITHFHLDHAAALPFLTEKTAFKGKVYMTHPTKAILKWLLNDYIRIINSAS 116 Query: 110 ------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + I +DV ++ H + ++ +++T Sbjct: 117 DEDFYTEKDLENCYNKIIPIDYHQVIDVVGIKFTALNAGH-VLGAAMFLLEIGQTKLLYT 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIM 221 GD+ +DD L N + L+ +ST + E+ K + D++ Sbjct: 176 GDFSREDDRHL-------KSAETPNCKLDILITESTYGTQCHLPRIERENRFTKVVSDVV 228 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR------VVSVA 268 + C+L ++ R + ++ I ++ + + S+L + V Sbjct: 229 ERGGKCLL---PVFALGRAQELLLILDEYWEENPHLKKIPIFYASALAKKCMGIYQTYVN 285 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG-----EPRSALAQLSRGEMRNVKLA 323 + ++K L + F + P + +SR Sbjct: 286 MMNERMQKLNLTRNPFDFKNVENIKDAKTVRDGGPCVIMASPGMLQSGVSRDIFERWCSD 345 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ V+ + + G + + K +G + + S H Sbjct: 346 SKNGVVIAGYCVEGTLAKEVLKEPKEIESHRGQLLKLNMTVEYISFSAHVDYTQNAEFIY 405 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE----IIDEVVH 437 P L +HGE + K+ + + + I+ ++ Sbjct: 406 TCMPNYLFFVHGEATEMGRLKQSIQNKNEKNNIQMAIYTLKNGEEALIKIKNQNECKLYC 465 Query: 438 GLFLKDGFLIGKFADLGIA 456 + I I Sbjct: 466 TNDADEFDGILVKEGNDIK 484 >gi|312080023|ref|XP_003142424.1| cpsf3-prov protein [Loa loa] gi|307762413|gb|EFO21647.1| cpsf3-prov protein [Loa loa] Length = 715 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 40/232 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ LV PLG E+G + + K I++DCG+ + GVD P + F+ Sbjct: 10 SDSLVITPLGSGQEVGRSC----HYLTFKGKKILLDCGI---HPGMSGVDA-LPFVDFVD 61 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 E +L + +TH H DH GAL L + + + Sbjct: 62 CEELDL--LLVTHFHLDHCGALPWLLEKTAFRGRCFMTHATKAIYRMSIGDYLKVSKYGG 119 Query: 110 --------VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 E + K + I ++ +V V + +I I Sbjct: 120 SSDNRMLYNEEDLEKSMEKIEVIDFHEQKEVNGIKF-WCHVAGHVLGACMFMIEIAGVRI 178 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 ++TGD+ +D L + L+C+ST + E+ Sbjct: 179 LYTGDFSRLEDRHLCA-------AELPTVSPDVLICESTYGTQVHESRDERE 223 >gi|284161132|ref|YP_003399755.1| beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011129|gb|ADB57082.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631] Length = 409 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 75/412 (18%), Positives = 139/412 (33%), Gaps = 67/412 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + L IM+D G+ + ++ + P + Sbjct: 9 LGGCREVGRSAILV--------DSIMLDYGLKPSEPPEFPLNGIAP------------KS 48 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL----LEAKRVYERVSKKIPC------ 120 + I+H H DH G +L +Y +P + L L R P Sbjct: 49 VIISHGHLDHVGVAPNLV-DYDPKIYMTPPTLDLSDIILRDSMKLMRNPPYTPRQFRQFE 107 Query: 121 ---ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD- 176 I + + + + + H IP + ++ + S NI++TGD KL++ +L Sbjct: 108 SNVIEVDYEEPIYIDGWEVTLFNAGH-IPGSASIHM-SKDVNILYTGDIKLEETRLLEPA 165 Query: 177 VTDKDSLCAIGNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 TD L+ +ST EK ++I + + N KG ++ F+ Sbjct: 166 YTDF--------PETDILIVESTYFGVEHPDRKELEKAFVESILETLDN-KGHAIIPAFA 216 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGS---------SLKRVVSVAIDVGIIKKDQLFLSDES 285 V R + ++ I E G + G V + K+ + + Sbjct: 217 --VGRTQEVLMILESYGITPYVDGMGRDVCSIIERYPDYVKSVRALRRAIKNAIPVERGM 274 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 E +++ T AL +SR + EK ++ + + G + Sbjct: 275 RERILEEPSVIVTTAGMLNGGPALFYISR-----LYNDEKSKILLTGYQVEGTNGYMALN 329 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI---RPQVLVAIHGE 394 + V + S H LK + + + +V+ +HGE Sbjct: 330 NGMIDLGNRIVKLKMKVEQYDFSAHADDRQLKELVRRVVDRGAEVVFTVHGE 381 >gi|226505292|ref|NP_001151522.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Zea mays] gi|195647398|gb|ACG43167.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Zea mays] gi|224034229|gb|ACN36190.1| unknown [Zea mays] Length = 694 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 60/465 (12%), Positives = 133/465 (28%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 26 DQMVITPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYTGM----AALPYFDEID- 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI--- 118 + + ITH H DH +L V+ + + + K+ Sbjct: 77 -PSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 135 Query: 119 --------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++V H + ++ I++TG Sbjct: 136 DMLFDESDIARSMEKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 194 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST +++ + EK + I++ + Sbjct: 195 DYSREEDRHL-------RAAELPQFSPDICIIESTYGVQQHQPRIVREKRFTEVIHNTVS 247 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ ++ + + + Sbjct: 248 QG-GRVLIPAFA--LGRAQELLLILDEYWSKHPELHKIPIYYASPLAKRCMAVYQTYINS 304 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P + LSR + Sbjct: 305 MNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPSGLQSGLSRQLFDKWCTDK 364 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 ++ + + G NE + N L + + S H Sbjct: 365 RNACVIPGYVVEGTLAKTIINEPREVALANGLTA-----PLHMSVHYISFSAHADFPQTS 419 Query: 378 RMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKM 421 +RP ++ +HGE ++L Q V Sbjct: 420 NFLDELRPPNIILVHGEANEMSRLKQKLITQFDGTNTKIVSPKNC 464 >gi|300173358|ref|YP_003772524.1| putative hydrolase [Leuconostoc gasicomitatum LMG 18811] gi|299887737|emb|CBL91705.1| predicted hydrolase [Leuconostoc gasicomitatum LMG 18811] Length = 397 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 77/411 (18%), Positives = 144/411 (35%), Gaps = 63/411 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----FPDIT 59 + L G+ IG N+ + G + +++D GV+F + P DL+ PD Sbjct: 1 MRMQVKFLNGLNTIGGNVVSFTQG----KTRLVMDFGVNFAPSETPTGDLLANGTLPD-- 54 Query: 60 FIMKERKNLMA-----IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL--LEAKRVYE 112 + ++ + IF++H H DH GAL L + VY S + L + K E Sbjct: 55 -LPDLFTDVSSEYETTIFVSHLHLDHMGALKYLTKPID--VYMSQASADLYYVLTKLGIE 111 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--D 170 + G F + +H A+ IR+ +VH+GD +LD Sbjct: 112 -SAPYANIKVIDFEKPTSFGDFEVTFFETDHDARGAAAIRIRNGEHTVVHSGDVRLDGPH 170 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTN------AMREGTCISEKGIKKNIYDIMKNA 224 + D +E I L+ + T +E +++N I++++ Sbjct: 171 PERVNHWADVLR-----DENIDLLLLEGTEFSFDEANDIAHERYTEMSLQQNFAQILQSS 225 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 + V++ + ++ R+ ++ + GR++ L + Sbjct: 226 EQLVVINPYERNIDRLVALQATVQANGREMRWD--------------HQFATILLAVGMT 271 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE--VAI 342 E ++ +P + Q ++ ++ D V P E Sbjct: 272 DVKEIDWETVL-------AQPGHYVIQNHFNQLHDLDQFNGDYVYLHMNGEPLGEYDPRF 324 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + L V C + VSGH P+DL + Q I + V H Sbjct: 325 AELSDYLTNNDVLF------CSLGVSGHATPDDLVALAQHISAKKTVTWHS 369 >gi|261402359|ref|YP_003246583.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] gi|261369352|gb|ACX72101.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] Length = 428 Score = 109 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 70/424 (16%), Positives = 144/424 (33%), Gaps = 60/424 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + G E+G + + + I++DCGV G D+ +P + Sbjct: 1 MEIIFRGAALEVGRSC----IEVKTDKSKILLDCGVK------LGKDIEYP---LLDNSI 47 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRV---------YERVS 115 K++ +F++HAH DH G+L L+ + VP+ + L++ ++ Sbjct: 48 KDIDKVFVSHAHLDHSGSLPILFSKRIDVPIITTELTKKLVKVLLKDMIRISETENRKIP 107 Query: 116 KKIPCISFQAGDKVDVG--------AFSIESVRVNHSIPETMALVIRS-PVGNIVHTGDW 166 I + +G FS E H IP + ++++ NI++TGD Sbjct: 108 YNYHDIKETMRYTIPLGYKEKKYYKDFSYELFSAGH-IPGSASILLNYENGKNILYTGDI 166 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 KL + + D + I L+ +ST + I I + Sbjct: 167 KLRNTRL-TKGADLS----YTKDDINVLIIESTYGNSIHPDRKAVEL-SFIQKIKEVLFR 220 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSS------LKRVVSVAIDVGIIKKDQ 278 +V +V R + I I I + G + + + + + ++K Sbjct: 221 GGVVLIPVFAVDRAQEIALILNDYDIDAPIYMDGMAVEVTKLMLKYRDMLNEANQLEKAI 280 Query: 279 LFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + +VI T + L L K+ ++ Sbjct: 281 EKIKLIEKSEDRVKAVENLSKNGGVVITTAGMLDGGPILYYLKLFMHD-----PKNALLL 335 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + + + +L + + C + S H ++L + + + P++L+ Sbjct: 336 TGYQVRDSNGRHLIETGKLFIEKEEIKPNLEVCLYNFSCHAGMDELHEIIKKVNPELLII 395 Query: 391 IHGE 394 HGE Sbjct: 396 QHGE 399 >gi|167526212|ref|XP_001747440.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774275|gb|EDQ87907.1| predicted protein [Monosiga brevicollis MX1] Length = 668 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 74/476 (15%), Positives = 141/476 (29%), Gaps = 68/476 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDIT 59 + L +PLG E+G + + Y + IM+DCG K L P VD V D++ Sbjct: 21 EDILSIMPLGAGQEVGRSCHIITYKGFT----IMLDCGTHPAKSGLAQLPYVDEV--DLS 74 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR-------- 109 + F+TH H DH GAL L S V+ + + + Sbjct: 75 -------QVDFCFVTHFHVDHCGALPWLLSKTPFKGRVFMTHATKAVYQWMLTDYVRINA 127 Query: 110 ---VYERVSKKIPCISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNI 160 + S K + + + VD S H + I + Sbjct: 128 TTDDNQLFSDKDIENTMKRIETVDFEQTVMLRGLSFTPYSAGH-VLGACMFEIDIAGVKL 186 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD+ D+D L +I L+ +ST E ++ ++ ++ Sbjct: 187 LYTGDFSRDEDRHLMA-------ASIPPIKPDILIAESTLGDLEHENRQDRE-RRFTKEV 238 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 + ++ R + ++ E I + KR + V Sbjct: 239 HTIVQRGGRCLIPVFALGRAQELLLILDEYWQQHPELHNVPIYYASALAKRCMGVFKAFV 298 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQG----------EPRSALAQLSRGEMRNVKL 322 + ++ + + + + + + P LSR Sbjct: 299 NMMNPKIQQQMKISNPFQFQFIHNLRKLDEFDDHGSSVVLATPGMLQNGLSRELFERWAP 358 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKR 378 + VI + + G + + + V + + H + Sbjct: 359 NRHNGVILAGYHVEG--TLAHELLKQPRQIRSMAGGTVPRNCTIANISFNAHVDSIQNRD 416 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDE 434 + PQ LV +HG+ + KE L++ + E Sbjct: 417 FIGELEPQHLVLVHGQESQMRKLKESVLKDFEQRDRLISVYNPKNTEKQLFHYRGE 472 >gi|327399985|ref|YP_004340824.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327315493|gb|AEA46109.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 407 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 132/415 (31%), Gaps = 63/415 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 +V LGG E+G + + I++D G+ ++ V P Sbjct: 2 VVIHFLGGCREVGRSAIMV--------DSIILDYGMKPSSPPEFPINGVSPTE------- 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE--------RVSKK 117 + ITH H DH G + +L VY +P L ++ Sbjct: 47 -----VIITHGHLDHVGVVPNLM-DYDPSVYMTPPTRDLAHVLLKDSMNIMEYPPYGRRE 100 Query: 118 IPCISFQAGDKVDVGAFSIESVRVN----HSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 A D F I V IP + + + S NI++TGD KL + + Sbjct: 101 FRQFESNARDVEFYEPFYISGWEVTLFNAGHIPGSAMVHM-SKDINILYTGDVKLQETRL 159 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 L + L+ +ST EK +++ + + G ++ Sbjct: 160 LEP-------ADLNFPETDVLIVESTYFGIEHPDRRELEKAFVESVIETLDRG-GHAIIP 211 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK---------RVVSVAIDVGIIKKDQLFLS 282 F+ V R + ++ I E+ G + G + + A + K + + Sbjct: 212 AFA--VGRTQEVLMILEKHGITPYVDGMGKEVGKILERYPDYIKSARKLRRALKKAIPVE 269 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 E ++ T AL +S+ + EK ++ + + G + Sbjct: 270 RGKREDVLTEPAAIVTTAGMLNGGPALFYISK-----LYNDEKSKILLTGYQVEGTNGDM 324 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI---RPQVLVAIHGE 394 K L V + S H LK + + +++ +HGE Sbjct: 325 ALKKGMLNLGMRTVKLKMGVEQYDFSAHADDEQLKEVVEKAANKGAEIVFTVHGE 379 >gi|328867689|gb|EGG16071.1| beta-lactamase domain-containing protein [Dictyostelium fasciculatum] Length = 786 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 69/481 (14%), Positives = 139/481 (28%), Gaps = 68/481 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L +P+G E+G + L Y K IM DCGV L P I Sbjct: 23 EDDILQIMPIGSGSEVGRSCVLLKY----KGKTIMFDCGVHPAYSGLSS----LPFFDSI 74 Query: 62 M--KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR-------- 109 ++ + ++H H DH A+ VY + + + Sbjct: 75 ELYCNIDDIDLLLVSHFHLDHAAAVPYFVQKTDFKGKVYMTHPTKKIYKVLLSDYVKVSN 134 Query: 110 ---------VYERVSKKIPCISF-QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + ++ +P I K++ H + ++ Sbjct: 135 ISVAEDMPFDEQDLNASLPKIEHINYHQKIEHNGIKFCCYNAGH-VLGAAMFMVEIAGVR 193 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+ +D L + L+ +ST ++ E+ ++ Sbjct: 194 ILYTGDFSRQEDRHLMG-------AESPPVDVDVLIIESTYGVQVHEPRLERE-RRFTTS 245 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVL--------------L 257 I + + ++ R + ++ I ++ G I Sbjct: 246 IHEIVRRGGRCLIPVFALGRAQELLLILDEYWIAHPELHGIPIYYASALAKKCMKVYQTY 305 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 + + V + + V P + LSR Sbjct: 306 IQMMNERIRAQFAVSNPFIFKHIKDINGIDNFNDNGPCVF----MASPGMLQSGLSRQLF 361 Query: 318 RNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 ++ V+ ++ G + + G+ V + V S H Sbjct: 362 ERWCSDRRNGVVIPGYSVEGTLAKHIMSEPSEITRLDGINVPLNLSVTYVSFSAHSDFLQ 421 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPVRNGKMLRLFPDPIEIIDE 434 Q I P +V +HG+ + K L + V +N +R+ P ++ Sbjct: 422 TSEFIQDIHPPHIVLVHGDANEMSRLKHSLVSKFKTVNVMTPKNSMSVRMVFKPQKVAKI 481 Query: 435 V 435 V Sbjct: 482 V 482 >gi|291000374|ref|XP_002682754.1| predicted protein [Naegleria gruberi] gi|284096382|gb|EFC50010.1| predicted protein [Naegleria gruberi] Length = 458 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 77/454 (16%), Positives = 144/454 (31%), Gaps = 74/454 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG ++G + + G RK IM DCG+ +D + FPD FI K + Sbjct: 1 LGAGQDVGRSCVIVTIG----RKTIMFDCGMHMGYND----ERRFPDFKFISKNGQFTQT 52 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV----------- 114 + + I+H H DH GAL P+Y + + R Sbjct: 53 IDCVIISHFHLDHCGALPYFTEVCGYDGPIYMTYPTKAIAPILLEDFRRVMVDRKGDNLN 112 Query: 115 --------SKKIPCISFQ---AGDKVDVGAFSIESVRVNHSIPETMALVIRS--PVGNIV 161 K + I+ H + ++ ++V Sbjct: 113 QGFFSSEDVKNCIKKVQPLNLHQTIILDDELEIKPYYAGH-VLGAAMFYVKDLATGASVV 171 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYD 219 +TGD+ + D LG T I L+ ++T A R+ E+ K +YD Sbjct: 172 YTGDYNMTADRHLGSAT-------IDRCRPDLLITETTYATTIRDSKSSRERDFCKQVYD 224 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLK---RVVSVAI 269 + N KG VL+ F+ + R++ + + E + + + Sbjct: 225 TVVNKKGKVLIPVFA--LGRVQELCILLETYWERKNLGKSVPIYFSAGMVEKANYYYQLY 282 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNV 320 +K + L D+ L+ + P + A +S + Sbjct: 283 INWTNEKIKTTLFDQKRNLFNFSNIQSFERFLMDNPGPMVLFATPGMLHAGMSLEVFKKW 342 Query: 321 KLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECP-----VHVSGHPYPN 374 E + VI + G + K+ + + + S H Sbjct: 343 APGENNKVILPGYCVEGTVGNKVLRNKDLKSSKIEIDSRTVIDMRCEVKAISFSAHADAK 402 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 + ++ + +P+ ++ +HGE + K+ E Sbjct: 403 GILQLIRTAQPKNVMLVHGERDKMAFFKKKIESE 436 >gi|114576014|ref|XP_515292.2| PREDICTED: hypothetical protein isoform 9 [Pan troglodytes] Length = 645 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 63/443 (14%), Positives = 137/443 (30%), Gaps = 66/443 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + + I+H H DH GAL ++ E KI Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTNL------------------EESMDKI 96 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I+F +V H + +I +++TGD+ +D L Sbjct: 97 ETINFHEVKEVA--GIKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-- 151 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 I N L+ +ST E+ + + ++ Sbjct: 152 -----AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALG 205 Query: 239 RIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYP 290 R + ++ I ++ + SSL + + D++ + Sbjct: 206 RAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFV 265 Query: 291 REQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-E 339 + + + + + P + LSR + +++ VI + + G Sbjct: 266 FKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLA 325 Query: 340 VAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLH 397 I + + + + + + S H + ++P ++ +HGE Sbjct: 326 KHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM 385 Query: 398 LVAHKELALQEGIACVPPVRNGK 420 L + + Sbjct: 386 ARLKAALIREYEDNDEVHIEVHN 408 >gi|289192409|ref|YP_003458350.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] gi|288938859|gb|ADC69614.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] Length = 427 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 71/423 (16%), Positives = 144/423 (34%), Gaps = 59/423 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + G E+G + + + I++DCGV G ++ +P + Sbjct: 1 MEIIFRGAALEVGRSC----IEIKTDKSKILLDCGVK------LGKEIEYP---ILDNSI 47 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRV--------YERVSK 116 +++ +FI+HAH DH GAL L+ + VPV + + L++ + Sbjct: 48 RDVDKVFISHAHLDHSGALPILFHRRIDVPVITTELSKKLIKILLKDMVRIAETENKKIP 107 Query: 117 KIPC---------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 I DK FS E H IP + +++++ P +++TGD K Sbjct: 108 YNNHDVKEAMRHTIPLNYNDKKYYKDFSYEFFSAGH-IPGSASILLKYPNKTVLYTGDIK 166 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 L D + D + I L+ +ST + I I + Sbjct: 167 LRDTRL-TKGADLS----YTRDDIDVLIIESTYGNSIHPDRKAVEL-SFIEKIREILFRG 220 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-----------KRVVSVAIDVGIIKK 276 + +V R + I+ I + + K +++ A + K Sbjct: 221 GVALIPVFAVDRAQEILLILNDYNIDAPIYLDGMAVEVTRLMLNYKNMLNEATHLEKALK 280 Query: 277 DQLFLSDESFGLYPREQL-----IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 + + + E L +V+ T + L L K+ ++ + Sbjct: 281 NVKIIEKSEDRVKAIEDLSKNGGVVVTTAGMLDGGPILYYLKLFMH-----NPKNALLLT 335 Query: 332 SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + ++ + C + S H ++L + + + P++L+ Sbjct: 336 GYQVRDSNGRHLIETGKIFIGKDEIKPNLEVCMYNFSCHAGMDELHEIIKKVNPELLIIQ 395 Query: 392 HGE 394 HGE Sbjct: 396 HGE 398 >gi|256810348|ref|YP_003127717.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens AG86] gi|256793548|gb|ACV24217.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens AG86] Length = 634 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 70/466 (15%), Positives = 145/466 (31%), Gaps = 57/466 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + + ++IDCG++ + D FP Sbjct: 179 WIRVSFLGGAREVGRSCLYV----QTPDTRVLIDCGINVAFE-----DKAFPHFDAPEFS 229 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 ++L A+ +THAH DH G + L+ + PVY + L+ + + K Sbjct: 230 IEDLDAVIVTHAHLDHCGFVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEV 289 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + I+ P A + +H GD + Sbjct: 290 PYTSKDIKTCVKHTIPIDYGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGDGLYNLAYTG 349 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK---GCV 228 + L + L+ +ST + ++ + ++ G V Sbjct: 350 DIKFETSRLLEPAVCQFPRLETLIIESTYGAYDDVLPERDEAERELLRVVSETTEKGGKV 409 Query: 229 LVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSD 283 L+ F V R + ++ + E+ + I L ++ A + + ++ Sbjct: 410 LIPVFG--VGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKEMRQKI 467 Query: 284 ESFGLYPR------------EQLIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKDT 327 G P E+ VI + + L+ G +++ EK+ Sbjct: 468 FHEGDNPFLSEVFKRVGSTNERRKVIDSDEPCIILATSGMLTGGPSVEYLKHLAPDEKNA 527 Query: 328 VIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHPYPNDLKRMY 380 +IF G + + + + V SGH L + Sbjct: 528 IIFVGYQAEGTLGRKVQRGWKEIPITTRNGKTKSIPINMKVYTIEGFSGHSDRKQLIKYI 587 Query: 381 QWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ P+ ++ +HGE + + + N +R+ Sbjct: 588 RRVKPSPEKVIMVHGEESKCLDFADTVRRLFKKQTYVPMNLDAIRV 633 >gi|242032211|ref|XP_002463500.1| hypothetical protein SORBIDRAFT_01g000850 [Sorghum bicolor] gi|241917354|gb|EER90498.1| hypothetical protein SORBIDRAFT_01g000850 [Sorghum bicolor] Length = 695 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 61/464 (13%), Positives = 136/464 (29%), Gaps = 73/464 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 26 DQMVITPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + ITH H DH +L V+ + + Sbjct: 77 -PSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 135 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 +++ + I ++V H + ++ I++TG Sbjct: 136 DMLYDENDIARSMEKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 194 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST +++ + EK + I++ + Sbjct: 195 DYSREEDRHL-------RAAELPQFSPDICIIESTYGVQQHQPRIVREKRFTEVIHNTVS 247 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ ++ + + + Sbjct: 248 QG-GRVLIPAFA--LGRAQELLLILDEYWSKHPELHKIPIYYASPLAKRCMAVYQTYINS 304 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P + LSR + Sbjct: 305 MNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTDK 364 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+ + + G NE + N L + + S H Sbjct: 365 KNACVIPGYVVEGTLAKTIINEPREVTLANGLTA-----PLHMSVHYISFSAHADFPQTS 419 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +RP ++ +HGE + K+ L+ V Sbjct: 420 NFLDELRPPNIILVHGEANEMSRLKQ-KLKTQFDGTNIVSPKNC 462 >gi|332019331|gb|EGI59837.1| Cleavage and polyadenylation specificity factor subunit 3 [Acromyrmex echinatior] Length = 685 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 63/462 (13%), Positives = 132/462 (28%), Gaps = 65/462 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L PLG E+G + + + K IM+DCG+ L G+D P + + Sbjct: 15 ESDLLSIRPLGAGQEVGRSCIMLEF----KGKKIMLDCGI---HPGLSGMDA-LPFVDLV 66 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + + + I Sbjct: 67 E--ADEIDLLLISHFHLDHCGALPWFLLKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIA 124 Query: 120 C-----------ISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVH 162 S + ++ + H + +I I++ Sbjct: 125 TEQMLYTESDLETSMDKIETINFHEEKDMFGIKFWAYNAGH-VLGAAMFMIEIAGVKILY 183 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L I N L+ +ST ++ + + + Sbjct: 184 TGDFSRQEDRHLMA-------AEIPNIHPDVLITESTYGTHIHEKREDRE-GRFTNLVHE 235 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII- 274 ++ R + ++ I ++ + SSL + + Sbjct: 236 IVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNA 295 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAE 324 D++ + + + + E P + LSR + Sbjct: 296 MNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDA 355 Query: 325 KDTVIFSSRAIPGNEVAIGHIK-----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 K+ VI + + G + G ++ + + + S H Sbjct: 356 KNGVIIAGYCVEG---TLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 412 Query: 380 YQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + ++P +V +HGE L + + Sbjct: 413 IRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHN 454 >gi|126458658|ref|YP_001054936.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248379|gb|ABO07470.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 634 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 88/462 (19%), Positives = 155/462 (33%), Gaps = 85/462 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K + LGG E+G + L G + +++DCG+ +DD L Sbjct: 170 KEGPITVTFLGGAMEVGRSAVLVSTGESN----VLLDCGLKPVQDDEDFPLLD------- 218 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 M + L A+ +THAH DH G L L+ + PVYA+ + +E K Sbjct: 219 MLDLDRLDAVVLTHAHMDHVGCLPLLYKYGYRGPVYATDPTKYQAYILLMDYVELKEREG 278 Query: 113 RVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ + D+ + H I MA I + NI+ Sbjct: 279 GLPSFSRADVEAVIYHTITLDYEEVTDITPDIKLTFYDAGHEIGSAMAHLHIGNGRYNIL 338 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+K +L + + L+ +ST R+ + + + Sbjct: 339 YTGDFKYGKTRLLNRAVN--KFKR-----VEMLIMESTYGGRDDVQPPRVEAENALAKHV 391 Query: 222 KNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 G VL+ FS+ R + I+ I ++ I + G ++ + + Sbjct: 392 AETVAKGGKVLIPAFST--GRGQEILYILNKMMEGGLIPRVPIYVDGMIVETLNVYLMYP 449 Query: 272 GIIKKDQLF-----------------LSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + + + Q+ IA + A + Sbjct: 450 HYLNPEVAEEIYSGVNPFTTSGAVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLN 509 Query: 315 G-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA---------ED 360 G + E++ +IF S G I N E VR + + Sbjct: 510 GGPILDYFAQLAPDERNKLIFVSYQAEG--TLGRRILNGEREFTVRSLTAGEIKVQMRME 567 Query: 361 AECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVA 400 A SGH +L + + I +P+ +V IHGEP +++ Sbjct: 568 AASIPGFSGHSDRRELMKYVEHIEPKPKKIVLIHGEPSKIIS 609 >gi|167384528|ref|XP_001736991.1| cleavage and polyadenylation specificity factor [Entamoeba dispar SAW760] gi|165900409|gb|EDR26730.1| cleavage and polyadenylation specificity factor, putative [Entamoeba dispar SAW760] Length = 453 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 131/440 (29%), Gaps = 53/440 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + GG +G + + I+ DCG + P G+D + + Sbjct: 1 MKVHVFGGGKSVGSSCVVVE----GKEDAILFDCGYN-PVRPDVGID-----FSRMNAIS 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + AI ITH H DH G L L F+ VP+Y S LL + C + Sbjct: 51 SKIRAICITHFHVDHVGMLPWLTKFMDVPIYLSEPTQALLSLIIKDIHSGNNLFCQADFD 110 Query: 126 GDKVDVGAFSIESVR-----------VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + I IV++GD+ + +L Sbjct: 111 KCISQCKPIDPTMTKRITQNLSIRCIYAGHALGAVMYEILLDGKRIVYSGDFDVSPSFLL 170 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 I + I L+ +ST + E + ++ A+ V Sbjct: 171 KG-------AQITSHAIDYLITESTCINEQHKRRYE--LYHYADCLLSAARSGGSVQIVV 221 Query: 235 SSVSRIRSIIDIA------EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 + + R + ++ I + + G L ++ + +D + ++F Sbjct: 222 NGIGRGQEVMGIVLSIVRRCHLTMPLCCSGGMLTKIANEYKRWKNWLRDDVHELVDNFSK 281 Query: 289 YPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 Y Q IA + + +K K VI S Sbjct: 282 YQMLSAQTNYIAITTPATLTKGHSL---EVFEKIKNDPKSFVILPSYVSSN-----PKTL 333 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELAL 406 Q + ED H L+ + ++P+ + +HG+PL + + Sbjct: 334 KETGYQCKIIRTEDNN-------HSDGFGLQEAIRALQPKEVFLVHGDPLKMQKSQIFFQ 386 Query: 407 QEGIACVPPVRNGKMLRLFP 426 + V N + L + Sbjct: 387 KLFNLPVHMPNNNEALIIND 406 >gi|326916480|ref|XP_003204535.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3-like [Meleagris gallopavo] Length = 759 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 59/454 (12%), Positives = 135/454 (29%), Gaps = 69/454 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITFIMKERKNL 68 G E+G + + + + IM+DCG+ + + P +DL+ P + Sbjct: 92 GAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP---------AEI 138 Query: 69 MAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI-------- 118 + I+H H DH GAL + + + I Sbjct: 139 DLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYT 198 Query: 119 ---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + +V H + +I +++TGD+ Sbjct: 199 ETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQ 257 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIYDIMKNAKGC 227 +D L I N L+ +ST E+ + ++DI+ Sbjct: 258 EDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRG 310 Query: 228 VLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRV-VSVAIDVGIIKKDQL 279 ++ ++ R + ++ I ++ + SSL + ++V D++ Sbjct: 311 LI---PVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI 367 Query: 280 FLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEKDTVI 329 + + + + + + P + LSR + +++ VI Sbjct: 368 RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI 427 Query: 330 FSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV 387 + + G I + + + + + + S H + ++P Sbjct: 428 IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH 487 Query: 388 LVAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 ++ +HGE L + + Sbjct: 488 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 521 >gi|300121617|emb|CBK22135.2| unnamed protein product [Blastocystis hominis] Length = 545 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 69/437 (15%), Positives = 139/437 (31%), Gaps = 44/437 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LGG IG + L G +++DCG KD PD + + K Sbjct: 1 MQISLTVLGGGQSIGKSCFLLSVGDQH----VLLDCGSFVGKDT----KKALPDFSKLPK 52 Query: 64 ER--KNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR---------- 109 ++ A+ I+H H DH G L L L +YAS +L Sbjct: 53 SMTVNDITAVLISHFHMDHIGGLLYLTEQLKYKGDIYASSPTRAVLPLLLRNNRVLLTNQ 112 Query: 110 --------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + + + + + + + + I + +I+ Sbjct: 113 AQVQSTVTMETFAKLTKHIREVTVNESIQLNPNLRITAHIAGHVLGAVMWEIEAYGRSIL 172 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ + + GN +L + C N + + + ++ + Sbjct: 173 YTGDFSDEPGGFIPSYQLPARFLRPGNLDMLIMECTYGNTEFKSYEDRKNTLLDSVLSTI 232 Query: 222 KNAKGCVLVTTF--SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 +N +G VL+ + + + +D+ + SS ++ + Sbjct: 233 QN-RGKVLIPCYGIGHTQELLAMFLDLWNSKNLTTPIYFSSQDTKSTLPLFSYYSSWTSH 291 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPR-------SALAQLSRGEMRNVKLAEKDTVIFSS 332 LS +S + P + + EP + + +S+ ++ K+ VIF Sbjct: 292 PLSLQSDRIQPFR----MEFAASEEPFLLFATHPTMTSGVSKAVFPSIAGNPKNMVIFLG 347 Query: 333 RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 + P + G + V S HP R+ + +V IH Sbjct: 348 QNSPDTIAGQIMNSPAVTLDGKNIPVLCQRKIVPFSAHPDRKANCRLIERTGASCVVLIH 407 Query: 393 GEPLHLVAHKELALQEG 409 G+ + V + + Sbjct: 408 GDKANCVGLSKYYSKMH 424 >gi|24251248|gb|AAN46168.1| unknown protein [Synechococcus elongatus PCC 7942] Length = 215 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 12/184 (6%) Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIA--CVPPVRNGKMLRLFPDPIEIIDEVVH 437 +P+ V +HGE LV H + A G+ + + NG + L P+ I + D V Sbjct: 1 IALTKPKFFVPVHGEHRMLVQHCKTAQSMGVPPEHMIVIDNGDTVELTPESIGLGDRVTA 60 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 G+ L D G + +R+QL+ G +S++ L+++ + P + G+ D Sbjct: 61 GIELVDTSRTGLVDGKALKERQQLAEDGLVSLSALVNSQGQLVDAPTVHLRGV-VTSADP 119 Query: 498 GKIHKLLLKTVITTVVDL---------PQFRRKDLKLLRESISSALRSLLKKVWGKKPLV 548 ++ K V + + D L+ + ++ LK+ P++ Sbjct: 120 RRVSVWAQKEVEMALDNRWADYCRRLPSGELDVDWVGLQAEVEVGMQRRLKRELQCVPMI 179 Query: 549 TVFI 552 + Sbjct: 180 LCTL 183 >gi|10435258|dbj|BAB14541.1| unnamed protein product [Homo sapiens] Length = 278 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 31/246 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + V V+ H + I+ ++V+TGD+ + D LG Sbjct: 115 KGEANFFTSQMIKDCMKKVVAVHLH-----QTVQIKVGSESVVYTGDYNMTPDRHLGA-- 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I L+ +ST A R+ E+ K +++ ++ G VL+ F+ Sbjct: 168 -----AWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA-- 219 Query: 237 VSRIRS 242 + R + Sbjct: 220 LGRAQE 225 >gi|123439147|ref|XP_001310348.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] gi|121892114|gb|EAX97418.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] Length = 679 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 75/469 (15%), Positives = 150/469 (31%), Gaps = 73/469 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD---DLPGVDLVFPDIT 59 ++L +PLG E+G + + Y RK +M+DCG+ + LP +D + P Sbjct: 8 EDKLTVMPLGAGQEVGRSCIILKY----HRKRVMLDCGIHPAYENFGGLPFIDAIDP--- 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRVYERVSK- 116 + + ITH H DH A+ + + P + + + + V Sbjct: 61 ------AKIDVLLITHFHIDHITAVPWFLTQTNFSGPCFMTHTTKTISKTLLVDYVGVSG 114 Query: 117 -----------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + V + H + ++ Sbjct: 115 RGSEEPNLFTRADVANVQNMITAVNYHQTVTHQGIKMTCYPAGH-VLGACMWLVEIDGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLC-AIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 +++TGD+ L+++ L SL I +L + A E E N+ Sbjct: 174 VLYTGDFSLENERHLQGAEIPKSLSGEIIRPDVLIMESTHGLARIESRVDREYRFIDNVT 233 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAE-------QIGRKIVLLGSSLKRVVSVAIDV 271 I+K C++ ++ R + ++ I + + + GS+L + A Sbjct: 234 KIIKRGGRCLI---PIFALGRAQELLIILDEYWESHPEYNGVPIYYGSNLAKQAIAA--Y 288 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEMRNVKL 322 +D + G + + I + + +SR Sbjct: 289 NAFYQDHNSRVVTAKGKFEFSYVKYIRDYDFDDSLPCVVLCSPAMLQNGMSRKIFEAWCS 348 Query: 323 AEKDTVIFSSRAIPG--------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + +I + G N I + +++ + + + V SGH N Sbjct: 349 NSVNGLIIPGYIVDGTLPQVLMKNPAEITTLSGKIIPRKISIDY------VSFSGHADFN 402 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 R ++P+ +V IHG ++ KE LQ + V + Sbjct: 403 QTSRFITELKPKRIVLIHGVCGLMMQLKEKLLQMFVEDGLEVYTPGLCE 451 >gi|281348165|gb|EFB23749.1| hypothetical protein PANDA_020173 [Ailuropoda melanoleuca] Length = 591 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 67/461 (14%), Positives = 140/461 (30%), Gaps = 82/461 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNL 68 G ++G + L + +M+DCG+ +D D FPD ++I + L Sbjct: 1 GAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRNGRLTDFL 52 Query: 69 MAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKIPCI 121 + I+H H DH GAL P+Y + + R + Sbjct: 53 DCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFF 112 Query: 122 SFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWKL 168 + Q ++ + + I+ ++V+TGD+ + Sbjct: 113 TSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNM 172 Query: 169 DDD-AILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAK 225 D + D+ L+ +ST A R+ E+ K +++ ++ Sbjct: 173 TPDRHLGAAWIDRCR--------PNLLITESTYATTIRDSKRCRERDFLKKVHEAVERG- 223 Query: 226 GCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G VL+ F+ + R + + + I ++ ++ Sbjct: 224 GKVLIPVFA--LGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKI 281 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS----RAI 335 + ++ + + P + V S R Sbjct: 282 RKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFATPGMLHAGQSLQIFRKW 331 Query: 336 PGNEVAIGHI----------------KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKR 378 GNE + + + +L +G +V+ + + S H + + Sbjct: 332 AGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQ 391 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + P+ ++ +HGE + K+ QE NG Sbjct: 392 LVGQAEPESVLLVHGEAKKMEFLKQKIEQEFRVNCYMPANG 432 >gi|13541268|ref|NP_110956.1| RNA processing exonuclease [Thermoplasma volcanium GSS1] gi|14324652|dbj|BAB59579.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 407 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 72/424 (16%), Positives = 139/424 (32%), Gaps = 71/424 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-ITFIM 62 +L F LGG E+G G +++D G V PD Sbjct: 1 MKLKF--LGGAEEVGR----LGVKITDRNTSVIVDYG-------------VIPDKPPQYP 41 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE---------------- 106 + + A+FITH+H DH GA+ + +YA+ + ++ Sbjct: 42 MPPEPVDAMFITHSHLDHIGAIPVYYHKGEPDLYATQMTLNCMKPLLNDSLKVTNLEGYP 101 Query: 107 AKRVYERVSKK-IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 A + ++ + + DVG F + H IP + +I TGD Sbjct: 102 AMFNEDDINTALANMKPARYFESFDVGDFKVTPYPAGH-IPGSAMWKF-EDGKSITVTGD 159 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMK 222 D ++ L+ +ST A + S + ++K + + Sbjct: 160 VNTIDTYLINGA---------KPIKTDVLIIESTYAGKNHE--SREDVRKRFRESVREVI 208 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK------- 275 + G V++ F+ V R + +I +G + + G G +K Sbjct: 209 ESGGKVVMPAFA--VGRTQELIMTIADMGYDVSVDGMGNDISSIYLNTPGFLKSKRDFLR 266 Query: 276 --KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + I+I+T + L + + + EK + + Sbjct: 267 ALGKVREVKGRRMRENAINSDIIISTSGMLDGGPVLGYI-----QKLMEDEKSAIFVTGY 321 Query: 334 AIPGNEVAIGHIKNRLVE-QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 + G ++N + GV + + +S H ++L + I P+ +V +H Sbjct: 322 QVEG-TNGRSLLENGTITVAGVTMKPKMRVEFFDMSAHAGHDELVSFIKAINPEKVVLMH 380 Query: 393 GEPL 396 G+ Sbjct: 381 GDHR 384 >gi|326503296|dbj|BAJ99273.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 693 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 134/465 (28%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + +V PLG GE+G + + + ++ DCG+ + P I Sbjct: 22 DHMVVTPLGAGGEVGRSCVHMSF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI--- 118 + + +TH H DH +L V+ + + K+ Sbjct: 73 -PSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 131 Query: 119 --------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++V H + ++ I++TG Sbjct: 132 DMLFDEQDVIRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 190 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST +++ + EK I++ + Sbjct: 191 DYSREEDRHL-------KAAEVPQFSPDICIIESTYGVQQHQPRHVREKRFTDAIHNTVS 243 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ ++ + R + ++ I ++ +K + + + Sbjct: 244 QG-GRVLIPAYA--LGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKCMAVYQTYINS 300 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P S + LSR + Sbjct: 301 MNERIRNQFAQSNPFHFKHIEPLNSIDNFHDVGPSVVMASPGSLQSGLSRQLFDKWCTDK 360 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+T + A+ G NE + N L + S H Sbjct: 361 KNTCVIPGFAVEGSLVKTIINEPREVTLANGLTA-----PLHMQIFYISFSAHADFLQTS 415 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 +RP ++ +HGE + K +L Q V Sbjct: 416 GFLDELRPPNIILVHGEANEMGRLKQKLTTQFDGTNTKIVSPKNC 460 >gi|73979712|ref|XP_856134.1| PREDICTED: similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit) isoform 3 [Canis familiaris] Length = 635 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 43/235 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR 221 >gi|114576012|ref|XP_001154670.1| PREDICTED: hypothetical protein isoform 7 [Pan troglodytes] Length = 635 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 43/235 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR 221 >gi|84489102|ref|YP_447334.1| exonuclease [Methanosphaera stadtmanae DSM 3091] gi|84372421|gb|ABC56691.1| predicted exonuclease [Methanosphaera stadtmanae DSM 3091] Length = 635 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 105/274 (38%), Gaps = 45/274 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD--LVFPDITF 60 N+ + LGG E+G + + +++DCGV+ G+D +P + Sbjct: 176 NDWVRLTSLGGFREVGRSCLFL----QTPNSKVILDCGVNVA-----GIDEKTAYPFLNV 226 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVS 115 ++L A+ ITHAH DH G + L+ + P Y + ++ + Sbjct: 227 PEFNLQDLDAVIITHAHLDHTGFVPYLYHYGYDGPTYCTTPTRDMMTLLQQDHLDISHRE 286 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVN-------------HSIPETMALV--IRSPVGNI 160 K + + + +++ +V I + I N Sbjct: 287 DKPLPFNIKDVKETINKTITLDYGQVTDISPDIRLTLHDAGHIVGSAMAHLNIGDGKHNF 346 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR----EGTCISEKGIKKN 216 ++TGD+K + +L T K I +++ +ST R +EK + K Sbjct: 347 LYTGDFKNEQSRLL--GTPKQHFARI-----ESMVMESTYGGREDNTPTRNTAEKELVKA 399 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 IYD ++ G +L+ F+ V R + I+ + E+ Sbjct: 400 IYDTIQKG-GKILIPVFA--VGRAQEIMIVLEEF 430 >gi|150400487|ref|YP_001324253.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013190|gb|ABR55641.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 635 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 137/443 (30%), Gaps = 56/443 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + LGG E+G + I+IDCG++ D D FP Sbjct: 176 EDSWIRMSFLGGAREVGRTCNYL----QTPESRILIDCGINVAMDG----DRAFPHFDAP 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSK 116 + + A+ +THAH DH G + L+ + P+Y S L+ + Sbjct: 228 EFAVEEIDAVVVTHAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEG 287 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDD 171 K+ S + K I+ P A I H GD + Sbjct: 288 KVVPYSSKDIKKCVKHIIPIDYGVTTDVAPAIKLTMHNAGHILGSAIAHCHIGDGLYNIA 347 Query: 172 AILGDVTDKDSLCAIGNEG---ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 + L + L+ +ST + + ++N ++ K Sbjct: 348 YTGDIKFEASRLLEPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVIAETIKRK 407 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKK-------- 276 G +++ F + R + ++ + E+ + I L ++ A + Sbjct: 408 GKIIIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMR 465 Query: 277 -------DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAE 324 D FLS+ + I + + + G +++ E Sbjct: 466 NRIFHEGDNPFLSEVFKKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDE 525 Query: 325 KDTVIFSSRAIPG-NEVAIGH------IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 ++ ++F G I + NR + + SGH L Sbjct: 526 RNAIVFVGYQSEGTMGRKIQRGWNEIPVMNRNGKSRAVKVNLSVHTFEGFSGHSDRRQLI 585 Query: 378 RMYQWIR--PQVLVAIHGEPLHL 398 + + ++ P ++ +HGE Sbjct: 586 KYLRKLKPMPDRILTVHGESSKC 608 >gi|224140921|ref|XP_002323825.1| predicted protein [Populus trichocarpa] gi|222866827|gb|EEF03958.1| predicted protein [Populus trichocarpa] Length = 696 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 61/466 (13%), Positives = 136/466 (29%), Gaps = 75/466 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L PLG E+G + + K ++ DCG+ + P I Sbjct: 23 DQLTLTPLGAGNEVGRSCVYMSF----KGKTVLFDCGIHLAYSGM----AALPYFDEID- 73 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL---------------LE 106 + + +TH H DH +L V+ + + +E Sbjct: 74 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIFKLLLTNYVKVSKVSVE 132 Query: 107 AKRVYERVSKKIPCI--SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 E+ + VDV H + ++ +++TG Sbjct: 133 DMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 191 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ ++D L + + +ST ++ + K D++ + Sbjct: 192 DYSREEDRHLCA-------AEMPQFSPDICIIESTYGVQLHQPRHLRE--KRFTDVIHST 242 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGI 273 G VL+ F+ + R + ++ I ++ I K+ ++V + Sbjct: 243 ISLGGRVLIPAFA--LGRAQELLLILDEYWSNHPELHNIPIYYASPLAKKCMTVYQTYIL 300 Query: 274 IKKDQLFLSDESFGLYPREQLIVIA----------TGSQGEPRSALAQLSRGEMRNVKLA 323 +++ + + + + + + P + LSR Sbjct: 301 SMNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGGLQSGLSRQLFDMWCSD 360 Query: 324 EKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 +K+ + + G NE + N L + + S H Sbjct: 361 KKNACVIPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHY-----ISFSAHADYAQT 415 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + K +L + + Sbjct: 416 STFLKELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNC 461 >gi|115479027|ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza sativa Japonica Group] gi|113631340|dbj|BAF25021.1| Os09g0397900 [Oryza sativa Japonica Group] gi|218202115|gb|EEC84542.1| hypothetical protein OsI_31281 [Oryza sativa Indica Group] gi|222641522|gb|EEE69654.1| hypothetical protein OsJ_29268 [Oryza sativa Japonica Group] Length = 559 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 73/456 (16%), Positives = 146/456 (32%), Gaps = 67/456 (14%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-----KER 65 LG E+G + + +G K +M DCG+ D +PD ++ Sbjct: 8 LGAGQEVGKSCVVVTFGG---GKRVMFDCGMHMGHRDS----RRYPDFDRLLADGAADYT 60 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + ITH H DH GAL H PVY + L R Sbjct: 61 AAISCVVITHFHLDHIGALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHRGEE 120 Query: 124 QAGDKVDV-------------------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + D+ SI + H + + + IV+TG Sbjct: 121 EQYSYEDILRCMRKVIPLDLKQTIQVDKDLSIRAYYAGH-VLGAAMIYAKVGDAAIVYTG 179 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + D LG I + L+ +ST A + ++ + + K Sbjct: 180 DYNMTPDRHLGA-------AQIDRLKLDLLITESTYA-KTVRDSKHAREREFLKAVHKCV 231 Query: 225 KGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLL---GSSLKRVVSVAIDVGIIKKD 277 G V + ++ R + + D E++ KI + G +++ + + +G Sbjct: 232 SGGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIG-WTSQ 290 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTV 328 ++ S + + + P + + G + +EK+ V Sbjct: 291 KIKNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLV 350 Query: 329 IFSSRAIPGNEVAIGHIKNRL-----VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 + G + + +++ + + S H + + +++ Sbjct: 351 TLPGYCVAG--TIGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFL 408 Query: 384 RPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRN 418 P ++ +HGE P + + + G+ C P N Sbjct: 409 SPSHVILVHGEKPQMAFLKERIESELGMQCCYPANN 444 >gi|118576728|ref|YP_876471.1| cleavage and polyadenylation specificity factor/metal-dependent RNase [Cenarchaeum symbiosum A] gi|118195249|gb|ABK78167.1| cleavage and polyadenylation specificity factor/metal-dependent RNase [Cenarchaeum symbiosum A] Length = 645 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 146/446 (32%), Gaps = 70/446 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ LGG G++G + L + +++DCGV+ P P P + + Sbjct: 187 EISLTALGGFGQVGRSCMLL----STLDSKVLVDCGVN-PGAAHPSESY--PRLDWAGIT 239 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYERVS 115 +L A+ I HAH DH G L L + P+Y + + + ++ RV Sbjct: 240 LDDLDAVVIGHAHLDHTGFLPVLAKYGYRGPIYCTEPTLPMMNLIQLDAIKVATAQGRVP 299 Query: 116 KKIPCISFQAGDKVDVGA----------FSIESVRVNHSIPET-MALVIRSPVGNIVHTG 164 Q + + H + I S N V++G Sbjct: 300 VYAERDVRQIMRQAITLPYGTVTDISPDIKLVLANAGHILGSALCHFHIGSGDHNFVYSG 359 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D K + + + L+ +ST +E + + ++ + + A Sbjct: 360 DIKFGKSILFEA-------ASWNFPRVETLLIESTYGAKEDIQPTRQEVESAFINAVNGA 412 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS-SLKRVVSVAIDVGI 273 G VL+ +V R + I+ + + + G S + A + Sbjct: 413 LADGGKVLI--PIPAVGRAQEIMMVIDHYMKSGEMAEAPVFTEGMISEASAIHEAHPEYL 470 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGS-------QGEPRSALAQLSRGE-------MRN 319 ++ + + + + E + G P LA E ++ Sbjct: 471 ARELKQKILETDDNPFDSEYFTNVEHADGRDEALRDGSPCIILATSGMLEGGPVLEYFKS 530 Query: 320 VKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + +++ ++F S + G + NR + V I E SGH Sbjct: 531 IAPHKQNKILFVSYQVNGTLGRRVLDGARQVPLMNRGGKIEVVNIECRMEKLDGFSGHSD 590 Query: 373 PNDLKRMYQWIRPQV--LVAIHGEPL 396 N L Q +RP++ ++ HGE Sbjct: 591 YNQLTGFVQKLRPKLRRVLVNHGERR 616 >gi|48477759|ref|YP_023465.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Picrophilus torridus DSM 9790] gi|48430407|gb|AAT43272.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Picrophilus torridus DSM 9790] Length = 638 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 74/463 (15%), Positives = 141/463 (30%), Gaps = 80/463 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVD---LVFPDITF 60 + LGG E+G + L ++ I++DCG ++ D P + L P+I Sbjct: 178 WIRITALGGHREVGRSATLI----STNNSKILVDCGMINVNDPDHPWEEAPYLYVPEIQP 233 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRV 110 +L A+ +THAH DH G + L+ + P+Y + L A Sbjct: 234 F----SSLDAVILTHAHLDHSGLVPLLYKYGYDGPLYTTAPTRDLAALLQNDYIKVAHSE 289 Query: 111 YERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMAL-VIRSPVGNI 160 ++S + I + + + H + I + NI Sbjct: 290 GHKISYESKHIREMLKHTIALKYNETTDITPDVRLTLYNAGHILGSASVHLHIGDGLYNI 349 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V +GD K + + + + M +ST A R+ + + + D+ Sbjct: 350 VLSGDQKFEKTWLFNPAVN--RFPR-----VETFMIESTYAGRDDYTYTRSRAGEILTDV 402 Query: 221 MKNA---KGCVLVTTFSSSVSRIRSI---IDIAEQIGR----KIVLLGSSLKRVVSVAID 270 + G VL+ F+ V R + + I+ A + + L G ++ A Sbjct: 403 INRTFERGGSVLIPVFA--VGRSQEVMLVIEDAVKRNIIPRTNVYLEGMIMEATAIHAAY 460 Query: 271 VGIIKKD-----------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG---- 315 + KD +++ ++ + + ++ G Sbjct: 461 PEYLNKDLREQIMVKRDNPFLSDIFKQVETKKQREEIMDSSESKIILATAGMMNGGPVLD 520 Query: 316 ---------EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 E V + + G + N + I E Sbjct: 521 YFKSMAPLREHSLVFVGYQADGTLGRYIQSG-AKNVTLTDNGKPVK--IDINMSVETAEG 577 Query: 367 VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 SGH L + +PQ ++ HG+ L Sbjct: 578 FSGHSNKAQLLNYIATMQPKPQRILVNHGDGDKCYEFSRLIRS 620 >gi|326495416|dbj|BAJ85804.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 704 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 136/465 (29%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 34 DQMVVTPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 84 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + Sbjct: 85 -PSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 143 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ I++TG Sbjct: 144 DMLFDEQDIIRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 202 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST +++ + EK I++ + Sbjct: 203 DYSREEDRHL-------KAAEIPQFSPDICIIESTYGVQQHQPRHVREKRFTDAIHNTVS 255 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 256 QG-GRVLIPAFA--LGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKCMAVYQTYINS 312 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P S + LSR + Sbjct: 313 MNERIRNQFAQSNPFHFKHIDPLNSIDNFHDVGPSVVMASPGSLQSGLSRQLFDKWCTDK 372 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+T + A+ G NE + N L + S H Sbjct: 373 KNTCVIPGYAVEGSLAKTIINEPREVTLANGLTA-----PLNMQIFYISFSAHADFPQTS 427 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + P ++ +HGE + K +L Q V Sbjct: 428 GFLGELCPPNIILVHGEANEMGRLKQKLITQFDGTNTKIVSPKNC 472 >gi|149001776|ref|ZP_01826749.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP14-BS69] gi|147760234|gb|EDK67223.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP14-BS69] Length = 143 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 2/144 (1%) Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLD- 474 + NG +L L D I DG IG+ + RR LS G + +D Sbjct: 1 MSNGDVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDF 60 Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 I P+I+ G Y + G + + + + + + + ++ + +I +A+ Sbjct: 61 KSQMILSGPDILSRGF-VYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAI 119 Query: 535 RSLLKKVWGKKPLVTVFINKISRQ 558 R L + ++P++ I + Sbjct: 120 RPFLYENTEREPIIIPMILTPDEE 143 >gi|118431090|ref|NP_147298.2| putative exonuclease [Aeropyrum pernix K1] gi|116062416|dbj|BAA79487.2| putative exonuclease [Aeropyrum pernix K1] Length = 671 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 73/459 (15%), Positives = 147/459 (32%), Gaps = 70/459 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LG GE+G + L + +++D G+S G D +P Sbjct: 192 VRVVGLGSFGEVGRSAILV----DTGESKVLLDAGLS---PSGYGPDS-YPYYWSPEFRV 243 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYERVSK 116 L A+ I+HAH DH G L L+ + PVYA+P L+ R + Sbjct: 244 DELDAVVISHAHLDHVGTLPLLFKYGFRGPVYATPPTRDIMIIVLRDLINLMRKAQGEPP 303 Query: 117 -KIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPV--GNIVHTG 164 + + + V + + H I + + + NI++T Sbjct: 304 FEPRDVEKALTRLIPVNYNTVTDVAPDIKMTFINAGH-ILGSSMVHLHIGQGLYNILYTA 362 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+K T + + AL+ ++T +E +E ++ I + K Sbjct: 363 DFKFYRIKND-RSTRLLPPAEYSFQRVEALIMEATYGSKETQPRAEAE-EELINLVNKVY 420 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLK-------------RV 264 K + +V R + I+ + + I + G + + Sbjct: 421 KRGGKLLIPVMAVGRGQEILVVLNEALRSGKIPEIPIYVDGMVYEVTAVYTNYPELLVKP 480 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNV 320 + I + + Y R++ + + S ++ G + + Sbjct: 481 IRDRILKQGENPFEGPTTVYVTDHYKRDEAMY--SDKPAIILSTSGMMNGGPIVEYFKYL 538 Query: 321 KLAEKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 ++ + F S PG E I + + + + + +GH Sbjct: 539 ADDPRNALAFVSYQAPGTLGRRLQSGEREIELEMDGGIRRIKVNMEIVSIEGF--TGHST 596 Query: 373 PNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEG 409 +L + + +P+ +V HGEP + A Sbjct: 597 RGELLSFLRRLNPKPRNIVLNHGEPSAIAALAHTVKTGW 635 >gi|116283804|gb|AAH30988.1| CPSF3 protein [Homo sapiens] Length = 554 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 43/235 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSK 116 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS 114 Query: 117 KI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 I + + +V H + +I Sbjct: 115 NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVK 173 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +++TGD+ +D L I N L+ +ST E+ + Sbjct: 174 LLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR 221 >gi|72387720|ref|XP_844284.1| cleavage and polyadenylation specificity factor subunit [Trypanosoma brucei TREU927] gi|62359436|gb|AAX79873.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei] gi|70800817|gb|AAZ10725.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 770 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 37/218 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 35 STDEVEILPIGSGGEVGRSCVVVRY----KGRSVMLDCG-NHPAKS--GLDS-LPFFDSI 86 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE-RVSKKI 118 + + ITH H DH GAL ++ + + R+ Sbjct: 87 --RCDEIDLVLITHFHLDHCGALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFLRIGASA 144 Query: 119 PCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I ++V V + H + ++ +++TG Sbjct: 145 EDIVNNEWLQSTIEKIETVEYHEEVTVNGIHFQPFNAGH-VLGAALFMVDIAGMKLLYTG 203 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 D+ V D+ L + L+ +STN Sbjct: 204 DFS--------RVPDRHLLGAEVPPYSPDILIAESTNG 233 >gi|309799914|ref|ZP_07694118.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] gi|308116441|gb|EFO53913.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] Length = 116 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 2/115 (1%) Query: 441 LKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDN-HYNIFGVPEIVDIGIPAYDGDGGK 499 + DG IG ++ + R+ LS G V + ++ I + G Y Sbjct: 1 MIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKIIAKARVHTRGF-VYLKKSRD 59 Query: 500 IHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINK 554 I + + V TV Q D L+ + L L ++P + + + Sbjct: 60 ILRESTELVNQTVEGYLQGEEFDWAELKGKVRDNLAKFLFDQTKRRPAILPVVME 114 >gi|42523510|ref|NP_968890.1| beta-lactamase family exonuclease [Bdellovibrio bacteriovorus HD100] gi|39575716|emb|CAE79883.1| predicted exonuclease of the beta-lactamase family [Bdellovibrio bacteriovorus HD100] Length = 452 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 144/447 (32%), Gaps = 91/447 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMKERKNL 68 LG G + + L ++ I++DCG+ F + + D F + +++ Sbjct: 6 LGAAGTVTGSKFLVH----NNDTRILVDCGMFQGFKELRELNWE----DFPF---DPRDI 54 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC- 120 A+ +THAH DH GAL L P+Y + + L + AK E Sbjct: 55 QAVVLTHAHLDHCGALPLLVKKGFKGPIYCTEPTLELTKIILLDSAKIQEEDADYANKKG 114 Query: 121 -----------------------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + ++G+ + H I + I + Sbjct: 115 FSKHSPALALYTTEDVERTLPLLRPVNLHTQFEIGSLKVCFYSSGH-ILGAASATISNGE 173 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 +I +GD +D ++ L+ +ST R+ + + K + K Sbjct: 174 KSIHFSGDLGRYNDPLMP--------APEPPAKADYLVMESTYGDRDHSPKTSKEVLKEC 225 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGS 259 + ++G +L+ +F+ V R ++++ ++ G ++ LL Sbjct: 226 ILEIVKSRGVLLIPSFA--VGRAQNLLFEITELKRDGEVPAQIPVYFNSPMGHEVALLYE 283 Query: 260 SLKRVVSV-----AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + A + + + + I+IA L L Sbjct: 284 KYHPFHRLGSGQFAEVMSEVHTIKTAEESRALNDDKSGPKIIIAASGMLTGGRVLHHL-- 341 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGH 370 + ++ V+ + PG + N E + + + C V S H Sbjct: 342 ---KAFGPDSRNIVLLAGFQSPG--TRGFSLLNGAREIKIHGLYVEINCKVIPSDSFSAH 396 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEP 395 +DL + P+ + +HGEP Sbjct: 397 ADRSDLMTWLKQAPEIPKRMFLVHGEP 423 >gi|261327437|emb|CBH10412.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 770 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 37/218 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 35 STDEVEILPIGSGGEVGRSCVVVRY----KGRSVMLDCG-NHPAKS--GLDS-LPFFDSI 86 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE-RVSKKI 118 + + ITH H DH GAL ++ + + R+ Sbjct: 87 --RCDEIDLVLITHFHLDHCGALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFLRIGASA 144 Query: 119 PCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I ++V V + H + ++ +++TG Sbjct: 145 EDIVNNEWLQSTIEKIETVEYHEEVTVNGIHFQPFNAGH-VLGAALFMVDIAGMKLLYTG 203 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 D+ V D+ L + L+ +STN Sbjct: 204 DFS--------RVPDRHLLGAEVPPYSPDILIAESTNG 233 >gi|324506922|gb|ADY42942.1| Cleavage and polyadenylation specificity factor subunit 3 [Ascaris suum] Length = 706 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 97/272 (35%), Gaps = 45/272 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L F PLG E+G + + K I++DCG+ + GVD P + F+ Sbjct: 19 SDSLTFTPLGSGQEVGRSC----HYLTFKGKKILLDCGI---HPGMSGVDA-LPFVDFVD 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 E +L + +TH H DH GA+ L + + + Sbjct: 71 CEELDL--LLVTHFHLDHCGAVPWLLEKTAFRGRCFMTHATKAIYRMLIGDYLKVSKYGG 128 Query: 111 ---------YERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 E + K + I ++ +V H + +I + Sbjct: 129 GSDNRLLYTEEDLEKSMEKIEVIDFHEQKEVNGIKFWCYVAGH-VLGACMFMIEIAGVRV 187 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 ++TGD+ +D L + L+C+ST EG EK ++ Sbjct: 188 LYTGDFSRLEDRHLCA-------AELPTVSPDVLICESTYGTQVHEGREEREKRFTSTVH 240 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 +I+ G L+ F+ + R + ++ I ++ Sbjct: 241 EIVGRG-GRCLIPAFA--LGRAQELLLILDEY 269 >gi|298247547|ref|ZP_06971352.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer DSM 44963] gi|297550206|gb|EFH84072.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer DSM 44963] Length = 776 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 88/503 (17%), Positives = 165/503 (32%), Gaps = 79/503 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LGG E+G + L + +++D G+ + PD++ + K Sbjct: 1 MELTF--LGGASEVGASCTLL----QVVGRKLLVDGGMRPAAREG---QSRLPDLSLLDK 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASP----FAIGLLEA--KRVYERVSK 116 + A+ ITHAH DH GAL + S L H+P+YA+ LL + + + + Sbjct: 52 QP--PEALIITHAHIDHTGALPLIASLLPHIPIYATESTRVLTEVLLRDSVRIMEQEHLR 109 Query: 117 -------KIPCISFQAGDKVDVGAFS-------------IESVRVNHSIPETMALVIRSP 156 ++ V F ++ + H I L + +P Sbjct: 110 PDGETPLYNAEQVDAFLGRIQVMGFRQPFAPLAGSPDITVQFIPAGH-ILGAAMLFLETP 168 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIK 214 G + HTGD L D D ++L ++ + T R E+ + Sbjct: 169 EGTLFHTGDISL-TDQRTIKGLDINALPR-----ADVMITEGTYGNRSHSSRKEEEQKLA 222 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-----KIVLLGSSLKRVVSVAI 269 + ++ + + +V R + II I + + + + R V Sbjct: 223 ATVQAVLARGGR---ILCPAFAVGRAQEIILILKAYRASGKISPVPIYLDGMVRSVCDVY 279 Query: 270 DVGIIKKDQLFLSDESFGLYP--------------REQLIVIATGSQGEPRSALAQLSRG 315 G P E+ ++ S+ LS G Sbjct: 280 QQQSHDLQPTLQRHLVNGRRPLFADPQLHVFSVRSFERQGLVLHTKPKMVISSSGMLSGG 339 Query: 316 EMR----NVKLAEKDTVIFSS---RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 ++ E+D ++F+ PG + +R+ V ++S Sbjct: 340 ASPLYALDIAAREQDCLLFTGYQDEESPGYALLNAKQGDRIRIGEQFVTLNCQVTRYNLS 399 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDP 428 GH N ++ + ++P L+ +HG+ L A L+ + V G L + P Sbjct: 400 GHADSNQIQAVVSKVQPARLILVHGDSEALEA---LSQRFKHLSVAIPNVGTTLSITPTA 456 Query: 429 IEIIDEVVHGLFLKDGFLIGKFA 451 ++ + L+ Sbjct: 457 KVLVSSATSQRAMHADALLPDVT 479 >gi|326487902|dbj|BAJ89790.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 704 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 136/465 (29%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 34 DQMVVTPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 84 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + Sbjct: 85 -PSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 143 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ I++TG Sbjct: 144 DMLFDEQDIIRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRILYTG 202 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST +++ + EK I++ + Sbjct: 203 DYSREEDRHL-------KAAEIPQFSPDICIIESTYGVQQHQPRHVREKRFTDAIHNTVS 255 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 256 QG-GRVLIPAFA--LGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKCMAVYQTYINS 312 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P S + LSR + Sbjct: 313 MNERIRNQFAQSNPFHFKHIDPLNSIDNFHDVGPSVVMASPGSLQSGLSRQLFDKWCTDK 372 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+T + A+ G NE + N L + S H Sbjct: 373 KNTCVIPGYAVEGSLAKTIINEPREVTLANGLTA-----PLNMQIFYISFSAHADFPQTS 427 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + P ++ +HGE + K +L Q V Sbjct: 428 GFLGELCPPNIILVHGEANEMGRLKQKLITQFDGTNTKIVSPKNC 472 >gi|284165869|ref|YP_003404148.1| KH-domain/beta-lactamase-domain protein [Haloterrigena turkmenica DSM 5511] gi|284015524|gb|ADB61475.1| KH-domain/beta-lactamase-domain protein [Haloterrigena turkmenica DSM 5511] Length = 644 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 80/461 (17%), Positives = 154/461 (33%), Gaps = 90/461 (19%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-- 57 M ++E + LG E+G + + I+IDCG D PG + P Sbjct: 176 MSDDEYVRITTLGCCREVGR----ASFILSTPETRILIDCG------DKPGAEGEVPYLH 225 Query: 58 -ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + + + A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 APEALGAGPQTIDAVVLTHAHLDHSALIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSP 156 R CI + GD D+ + H + ++ I Sbjct: 286 AAKEGRAPPYESEQVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDG 345 Query: 157 VGNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + N+ +GD +D + V D + L+ +ST R ++ ++ Sbjct: 346 LYNVAFSGDIHYEDTRLFNGAVNDFPR--------VETLVMESTYGGRNDYQTDQEDSER 397 Query: 216 NIYDIMKNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGS------ 259 N+ +I+ + G VL+ F+ V R + I+ + A + G + L G Sbjct: 398 NLKEIINDTYDEGGKVLIPAFA--VGRSQEIMLVLEEAMRNGDIPSMPVHLDGMIWEATA 455 Query: 260 -----------SLKRVVSVAIDVGIIKKDQLFLS--DESFGLYPREQLIVIATGSQ---- 302 L+ + + + + + +E + +I + S Sbjct: 456 IHTTYPEYLRDDLRDRIFHDDENPFLADEFNHIDGGEEERQDVADGEPCIILSTSGMVTG 515 Query: 303 GEPRSALAQLSRGEMRNV-------KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 G S L+ + + + + IP +EV N + Sbjct: 516 GPIMSWLSHIGPDPDSTLVFVGYQAQGTLGRRIQNGWDEIPTSEVGAMGGNNGRGTLDLN 575 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 V E + SGH L+ + + RP+ ++ +HG+ Sbjct: 576 VDVETVDG---FSGHADRAGLENFVKTMNPRPEKVLCVHGD 613 >gi|225448242|ref|XP_002271646.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 693 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 63/469 (13%), Positives = 133/469 (28%), Gaps = 81/469 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + Y K I+ DCG+ + P I Sbjct: 21 DQLIITPLGAGNEVGRSCVYMSY----KGKTILFDCGIHPAYSVM----AALPYFDEID- 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 72 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 130 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 131 DMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 189 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST ++ + EK I+ + Sbjct: 190 DYSREEDRHL-------RAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIHSTIS 242 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVL--------------LGSS 260 G VL+ ++ + R + ++ I ++ I +S Sbjct: 243 QG-GRVLIPAYA--LGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYINS 299 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 + + + +S + V+ P + LSR Sbjct: 300 MNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVV----MASPGGLQSGLSRQLFDMW 355 Query: 321 KLAEKDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 +K+ + + G NE + N L + + S H Sbjct: 356 CSDKKNACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHY-----ISFSAHADF 410 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + + P ++ +HGE + K +L Q + Sbjct: 411 AQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNC 459 >gi|329766104|ref|ZP_08257663.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137375|gb|EGG41652.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 645 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 75/458 (16%), Positives = 151/458 (32%), Gaps = 64/458 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E+ + LGG ++G + L + I++DCG++ P P +D FP + F+ Sbjct: 184 QKSEVSLITLGGFSQVGRSCMLL----STPESKILVDCGIN-PGAKHP-MDS-FPRLDFL 236 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----AKRVYERVSK 116 L A+ I HAH DH G L L F P+Y + + ++ Sbjct: 237 DITLDELDAVVIGHAHLDHTGFLPALCKFGYKGPIYCTEPTLPMMNLIQLDAIKVASAQG 296 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDD 171 + P + + ++ A ++ V P+ A I H G+ D + Sbjct: 297 RTPMYAERDVKQIMKQAITLPYSTVTDISPDIKLVFANAGHILGSALCHFHIGN--GDHN 354 Query: 172 AILGDVTDKDS-----LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 + + + L+ +ST +E + + ++ + + N Sbjct: 355 FVYSGDIKFGKSILFEAASWNFPRVETLLIESTYGAKEDIQPTRQEVESAFINAVNNTLA 414 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS-SLKRVVSVAIDVGIIK 275 G VL+ +V R + I+ + + + G S + A + + Sbjct: 415 DGGKVLI--PIPAVGRAQEIMMVIDHYMKSGEMVEAPVFTEGMISEASAIHEAYPEYLAR 472 Query: 276 KDQLFLSDESFGLYPREQLIVIAT-GSQGEPRSALAQLSR-------------GEMRNVK 321 + + + + + E I ++ EP + +N+ Sbjct: 473 ELKQKILETDDNPFDSEYFTNIEHADAREEPMRDNSPCIILATSGMLEGGPVLEYFKNIA 532 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED---------AECPVHVSGHPY 372 +K+ V+F S + G + + + + E SGH Sbjct: 533 PDKKNKVLFVSYQVNG--TMGRRVLDGSKQVTMLGKEGKVEVVTINCSVEKLDGFSGHSD 590 Query: 373 PNDLKRMYQWIRPQV--LVAIHGEPLHLVAHKELALQE 408 N L Q +RP++ ++ HGE + Sbjct: 591 YNQLMSFVQRLRPKLRRVLVNHGERRKSENLAMNIRRM 628 >gi|313216448|emb|CBY37756.1| unnamed protein product [Oikopleura dioica] Length = 690 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 62/492 (12%), Positives = 144/492 (29%), Gaps = 76/492 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EELV LG E+G + L + ++ D G+ + L G P + + Sbjct: 7 DEELVITMLGAGQEVGRSCHLIEFKVLE----LIQDMGIHPGINGLNG----LPFMDY-- 56 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI-- 118 + + + I+H H DH G L + V+ + + + Sbjct: 57 TDPDKIDILLISHFHLDHCGGLPWFLTKTQFKGRVFMTYATKAIYRWLLSDYIKVSNVGV 116 Query: 119 ---------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + + + + H + ++ ++ T Sbjct: 117 EELLFTEKDLEETLDRIETVKFHAEKHINGIKFCAYHAGH-VLGAAQFMVEIAGVKVLFT 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIM 221 GD+ ++D L + + L+ +ST E+ I+DI+ Sbjct: 176 GDFSREEDRHLMA-------AEVPPQKPDILIMESTYGTHLHEKREEREHRFTSVIHDII 228 Query: 222 KNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVL--------------LGS 259 C++ ++ R + ++ E I + Sbjct: 229 NRGGRCLI---PVFALGRAQELLLILDDYWAQHPELHDIPIYYASTLAKKCMSVYQTYTN 285 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 ++ + AI + + + + + + + S G +S L++ Sbjct: 286 AMNSKIQKAITTRNPFQFRHISNLKGMEAFDDDIGPSVVLASPGMMQSGLSR---ELFEK 342 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIK--NRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + A+ G + + G ++ + + S H + Sbjct: 343 WCTNKRNGVILAGYAVEGTLAHQIKTEPDEIVTMSGQKLPLKMQVEYMSFSAHADYRQIS 402 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 + I+P +V +HGE L Q I + + ++V Sbjct: 403 EFVREIKPPHIVLVHGEAN---EMGRLKRQLDIEYEHDAETDITIHM----PRNAEKVKF 455 Query: 438 GLFLKDGFLIGK 449 + + Sbjct: 456 HFRGEKNAKVVG 467 >gi|222479397|ref|YP_002565634.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452299|gb|ACM56564.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 641 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 75/463 (16%), Positives = 143/463 (30%), Gaps = 97/463 (20%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-- 57 M ++E + LG E+G + + ++IDCG D PG + P Sbjct: 176 MSDDEWVRITTLGCCREVGRAAFIL----STPETRVLIDCG------DKPGAEGEVPYLQ 225 Query: 58 -ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + L A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 VPEALGAGAATLDAVVLTHAHLDHSAFVPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV 157 R I + GD D+ + H I + Sbjct: 286 AAKEGRTPPYESSQVREAIKHTIPLEYGDVTDIAPDVKLTFHNAGH-ILGSSVTHFHIGD 344 Query: 158 --GNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 N+ +GD +D + V D + L+ +ST R + + Sbjct: 345 GLYNVAFSGDIHYEDTRLFNGAVNDFPR--------VETLVLESTYGGRNDYQTDQADSE 396 Query: 215 KNIYDIMKNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGS----- 259 + + +++ G V++ F+ V R + I+ + A + G + L G Sbjct: 397 EALKEVINETYDQGGKVVIPAFA--VGRSQEIMLVLEEAMRNGDIPEMPVHLDGMIWEAT 454 Query: 260 ------------SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR---EQLIVIATGSQGE 304 L+ + + + + ++ I+I+T E Sbjct: 455 AIHTTYPEYLRDDLRDRIFHDDENPFLADQFNHIDAGEDERQDVADGDECIIISTSGMIE 514 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 ++ L R++ ++F G I+N E V Sbjct: 515 GGPIMSWL-----RHIGPDPDSNLVFVGYQAQG--TLGRRIQNGWDEIPVDGWGGGGRGD 567 Query: 365 VHV-----------SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 568 TLTLQMGTEVVDGFSGHADRQGLENFVKTMNPRPEKVLCVHGD 610 >gi|290978816|ref|XP_002672131.1| predicted protein [Naegleria gruberi] gi|284085705|gb|EFC39387.1| predicted protein [Naegleria gruberi] Length = 749 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 60/444 (13%), Positives = 136/444 (30%), Gaps = 60/444 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+LV PLG E+G + L + K ++ DCG+ + P I Sbjct: 37 EKLVVTPLGAGNEVGRSAVLLQF----KGKTVLFDCGIHPAFTGM----ASLPFFDTIE- 87 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH GAL V+ + + + Sbjct: 88 -PSEIDLVLVTHFHLDHCGALPYFTEHTNFQGRVFMTHPTKAIYKLLLTDFVKVSDVHVD 146 Query: 110 ----VYERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + I +++ H + ++ +++TG Sbjct: 147 DQLFTEQNLLDSLKKIELIDYHQELEHNGIKFWCYNAGH-VLGAAMFMVEIAGVRVLYTG 205 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D+ D+ L L+ +ST ++ SE+ K+ + + Sbjct: 206 DFS--------RQPDRHLLGAETPTMSPDVLIVESTYGIQVHESQSERE-KRFTQMVTEI 256 Query: 224 AKGCVLVTTFSSSVSRIRSII-------DIAEQIGRKIVLLGSSLKRVVSVAIDVGI-IK 275 K ++ R + ++ + + + + SSL + I + Sbjct: 257 VKRGGRCLIPVFALGRAQELLLILDEFWETHQDLQHIPIYYASSLAKKCMTIFQTYINMM 316 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEK 325 D++ + + + + + + + P + LS+ K Sbjct: 317 NDKIRKQFDIHNPFVFKHISNLRSIEDFQDNGPCVIMASPGMLQSGLSKELFELWCQDAK 376 Query: 326 DTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 + VI + ++ G + + + + G V + + S H + I Sbjct: 377 NGVIIAGYSVDGTLAKKIMSEPETVTLSNGNTVPLRMSVRTISFSAHSDKAQTEEFIGTI 436 Query: 384 RPQVLVAIHGEPLHLVAHKELALQ 407 +P ++ +HG+ + K Sbjct: 437 KPPHIILVHGDLANCNRLKHSLQS 460 >gi|301111988|ref|XP_002905073.1| cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4] gi|262095403|gb|EEY53455.1| cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4] Length = 724 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 56/461 (12%), Positives = 132/461 (28%), Gaps = 59/461 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG E+G + + + K IM+DCGV P G P + Sbjct: 17 MRIMPLGAGNEVGRSCIVLKF----KGKTIMLDCGV-HPGYSGHG---SLPFFDGVE--A 66 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV----------YER 113 + + + ITH H DH AL + V+ + +++ ++ Sbjct: 67 EEIDLLLITHFHIDHVAALPHFTEKTNFKGRVFMTHPTKAVMQMMLRDFLRVSNISVDDQ 126 Query: 114 VSKKIPCISF-------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + ++ H + +I +++TGD+ Sbjct: 127 IYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGH-VLGACMYLIEIGGVKVLYTGDY 185 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 L++D L + L+ +ST ++ + E+ + + + Sbjct: 186 SLENDRHLMA-------AELPACSPDVLIVESTYGVQVHQSVVERE-GRFTGQVEAVVRR 237 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 ++ R + ++ I ++ I + + V + D+ Sbjct: 238 GGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDR 297 Query: 279 LFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEKDTV 328 + + E + + + + P + +SR +++ Sbjct: 298 IRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNAC 357 Query: 329 IFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + + G + + G + + S H + + P Sbjct: 358 LIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPP 417 Query: 387 VLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 +V +HGE + L + V + Sbjct: 418 NIVLVHGEKNEMMRLKSALNKKFNDPKVYHPSISTPANMQE 458 >gi|313244184|emb|CBY15021.1| unnamed protein product [Oikopleura dioica] Length = 690 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 62/492 (12%), Positives = 144/492 (29%), Gaps = 76/492 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EELV LG E+G + L + ++ D G+ + L G P + + Sbjct: 7 DEELVITMLGAGQEVGRSCHLIEFKVLE----LIEDMGIHPGINGLNG----LPFMDY-- 56 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI-- 118 + + + I+H H DH G L + V+ + + + Sbjct: 57 TDPDKIDILLISHFHLDHCGGLPWFLTKTQFKGRVFMTYATKAIYRWLLSDYIKVSNVGV 116 Query: 119 ---------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + + + + H + ++ ++ T Sbjct: 117 EELLFTEKDLEETLDRIETVKFHAEKHINGIKFCAYHAGH-VLGAAQFMVEIAGVKVLFT 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIM 221 GD+ ++D L + + L+ +ST E+ I+DI+ Sbjct: 176 GDFSREEDRHLMA-------AEVPPQKPDILIMESTYGTHLHEKREEREHRFTSVIHDII 228 Query: 222 KNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVL--------------LGS 259 C++ ++ R + ++ E I + Sbjct: 229 NRGGRCLI---PVFALGRAQELLLILDDYWAQHPELHDIPIYYASTLAKKCMSVYQTYTN 285 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 ++ + AI + + + + + + + S G +S L++ Sbjct: 286 AMNSKIQKAITTRNPFQFRHISNLKGMEAFDDDIGPSVVLASPGMMQSGLSR---ELFEK 342 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIK--NRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 +++ VI + A+ G + + G ++ + + S H + Sbjct: 343 WCTNKRNGVILAGYAVEGTLAHQIKTEPDEIVTMSGQKLPLKMQVEYMSFSAHADYRQIS 402 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 + I+P +V +HGE L Q I + + ++V Sbjct: 403 EFVREIKPPHIVLVHGEAN---EMGRLKRQLDIEYEHDAETDITIHM----PRNAEKVKF 455 Query: 438 GLFLKDGFLIGK 449 + + Sbjct: 456 HFRGEKNAKVVG 467 >gi|300712088|ref|YP_003737902.1| hypothetical protein HacjB3_13645 [Halalkalicoccus jeotgali B3] gi|299125771|gb|ADJ16110.1| hypothetical protein HacjB3_13645 [Halalkalicoccus jeotgali B3] Length = 638 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 143/445 (32%), Gaps = 67/445 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + + LG E+G + ++ I+IDCG DD+P + + + Sbjct: 178 EEQWVRISTLGCCREVGRAAFVL----STADTRILIDCGDKPGSDDVPYLQV----PEAL 229 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSK 116 ++ A+ +THAH DH L L+ + P+Y + L+ Sbjct: 230 GSGANSIDAVVLTHAHLDHSALLPLLFKYGYDGPIYTTEPTRDLMGLLQLDYLDVAAKEG 289 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDD 171 + P + + + IE V P+ A I + H G+ + Sbjct: 290 RTPPYASEMVRETIKHTIPIEYGDVTDIAPDVKLTMHNAGHILGSAVSHFHIGNGMYNVA 349 Query: 172 AILGDVTDKDSL---CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--- 225 D+ L + L+ +ST R + ++ + + + A Sbjct: 350 FSGDIHYDETRLLNGAVNDFPRVETLVLESTYGGRNDYQTDQSDSEQKLIETISEAYDRG 409 Query: 226 GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 G +++ F+ V R + I+ + A + G I L G + + D Sbjct: 410 GKIVIPAFA--VGRSQEIMLVLEEAMRTGKIPEMPIHLDGMIWEATAIHTTYPEYLNDDV 467 Query: 279 LFLSDESFGLY--------------------PREQLIVIATGSQGEPRSALAQLSRGEMR 318 EQ I+++T ++ L Sbjct: 468 RDRIFHDDQNPFLADYFNHIDGGEDERQRVADDEQCIILSTSGMVTGGPIMSWL-----E 522 Query: 319 NVKLAEKDTVIFSSRAIPG-NEVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHP 371 ++ +T+IF G I ++ + R + + + V SGH Sbjct: 523 HLGPDPDNTMIFVGYQAQGTMGRRIQSGRDEIPMNDSRGRSNRLKLNLDVETVDGFSGHA 582 Query: 372 YPNDLKRMYQWI--RPQVLVAIHGE 394 L+ + + RP+ ++ +HG+ Sbjct: 583 DRQGLENFVKTMNPRPEKVLCVHGD 607 >gi|325958080|ref|YP_004289546.1| KH-domain/beta-lactamase-domain-containing protein [Methanobacterium sp. AL-21] gi|325329512|gb|ADZ08574.1| KH-domain/beta-lactamase-domain protein [Methanobacterium sp. AL-21] Length = 634 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 81/479 (16%), Positives = 149/479 (31%), Gaps = 69/479 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +NE LGG E+G + +S IM+DCGV+ D +P + Sbjct: 175 ENEWTRLTSLGGFREVGRS----SLFLQTSNSKIMLDCGVNVAGSDD---KSSYPYLNVP 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRVY 111 +L A+ I+HAH DH G L L+ + PVY + L+ A R Sbjct: 228 EFVLDDLDAVIISHAHLDHSGFLPYLYHYGYEGPVYCTTPTRDLMTLLQLDHIDIAHRED 287 Query: 112 ERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPET-MALVIRSPVGNIV 161 + I + + + + H + + I N V Sbjct: 288 NPLPFNIKHVKKSIKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAITHMHIGDGQHNFV 347 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-I 220 +TGD+K + +L I +L+ +ST + S +K + I Sbjct: 348 YTGDFKYERSRLLEPA--VSKFPRI-----ESLVMESTYGGHDDVQPSRNDAEKELVKTI 400 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGI 273 + + V +V R + ++ + ++ + + G + Sbjct: 401 YRTLERGGKVLMPVFAVGRAQELMIVLDEYIRHGMIEEVPVFIDGMIWEATAIHTARPEY 460 Query: 274 IKKD----------QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE----MRN 319 + KD F+SD + + I G S L+ G + Sbjct: 461 LSKDLRDQIFHMGRNPFISDVFHKVNGGNERQEIVEGEPAIILSTSGMLTGGNSVEYFKQ 520 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKN--RLVEQGVRVIAEDAECPVHV------SGHP 371 + EK++++F G ++ + + +H+ SGH Sbjct: 521 LCGDEKNSLVFVGYQAEG--SLGRRLQKGWKEIPLKEEGKTNVYNVKMHIKTIEGFSGHS 578 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 L + + P+ H +K L L I + + L I+ Sbjct: 579 DRRQLMDYVRRLSPK---PEKILFCHGDNYKTLDLASSIYRSYKIETKTPMNLETVRIQ 634 >gi|323704901|ref|ZP_08116478.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535827|gb|EGB25601.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] Length = 820 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 72/478 (15%), Positives = 138/478 (28%), Gaps = 79/478 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F GG E+G + L K I++DCG+ G D PD I + Sbjct: 1 MKFYFCGGASEVGASCYLV----NIDGKNILLDCGIRMAS----GKDN-LPDFQLIQENG 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGL--------LEAKRVYERVSK 116 + I I+HAH DH GAL L + +Y + A L L+ + Sbjct: 52 G-VDVILISHAHMDHIGALPILSRIYPDAKIYMTHAAKDLTRVLLYDSLKIMEREAEIPA 110 Query: 117 KIPCISFQAGDKV-------DVGAF-----SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + +++ F + H I + I G+ ++G Sbjct: 111 YAEIHVKEMLNRIICHTPGHTFSPFLDSDLKVTFYSAGH-IAGAASTYIVGNEGSFFYSG 169 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + +I +ST + E + + I Sbjct: 170 DFSRFRQNTIEG-------ASIPKLRPDVAFFESTYGDKLH-ANRELEESRLVEKIGYVI 221 Query: 225 KGCVLVTTFSSSVSRIRSII-----------------------DIAEQIGRKIVLLGSSL 261 K V + ++ R + II DI L SL Sbjct: 222 KNGGKVLIPAFALGRAQEIILILKKAINKGMIETKVYVDGMVKDICRIYKLNPNYLRESL 281 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + ++ + + + ++ VI + S L K Sbjct: 282 AKKIFKGGEI-FFDDNIMPVDKSEMREEIIKEPCVIVSSSG-----MLTGGPSQWYAE-K 334 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRL---------VEQGVRVIAEDAECPVHVSGHPY 372 LA + + + E + + + A +S H Sbjct: 335 LAGDEKNLIAITGYQDEESPGRKLLELTDEKDDDKKLKLADKEIPIKCAVDKFGLSAHAD 394 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 +++ + + P+ + IHG+P + + ++ V +NG + + Sbjct: 395 MSEILSLANILHPKKVFLIHGDPDTINFLGKEIQKDINTDVYVPQNGDVYDIDIQNPR 452 >gi|292655037|ref|YP_003534934.1| mRNA 3-end processing factor-like protein [Haloferax volcanii DS2] gi|291372149|gb|ADE04376.1| mRNA 3-end processing factor homolog [Haloferax volcanii DS2] Length = 640 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 71/456 (15%), Positives = 146/456 (32%), Gaps = 89/456 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E + LG E+G + + I++DCG DD+P + + + Sbjct: 179 DEWVRITTLGCCREVGR----ASFIVSTPETRILVDCGDKPGSDDVPYLQV----PEALG 230 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYER 113 +L A+ +THAH DH + L+ + P+Y + L L+ R Sbjct: 231 SGANSLDAVVLTHAHLDHSALIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDVASKEGR 290 Query: 114 VSKKIPCISFQAGDKV----------DVGAFSIESVRVNHSIPETMAL-VIRSPVGNIVH 162 + +A + H + ++ I + N+ Sbjct: 291 TPPYESEMVREAIKHTIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLYNVAF 350 Query: 163 TGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +GD +D + V D + L+ +ST R ++ ++ + +++ Sbjct: 351 SGDIHYEDTRLFNGAVNDFPR--------VETLVLESTYGGRNDYQTDQQDSEERLIEVI 402 Query: 222 KNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGS------------ 259 G V++ F+ V R + I+ + A + G + L G Sbjct: 403 NETYDRGGKVVIPAFA--VGRSQEIMLVLEEAMRSGKIPEMPVHLDGMIWEATAIHTTYP 460 Query: 260 -----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR---EQLIVIATGSQGEPRSALAQ 311 L+ + + + ++ + +Q I+++T ++ Sbjct: 461 EYLRDDLRDRIFHEDENPFLAEEFNHIDGGEEERQDVADGDQAIILSTSGMVTGGPIMSW 520 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV------ 365 L R+V K ++F G I+N E V Sbjct: 521 L-----RHVGPDPKSRLVFVGYQAQG--TLGRRIQNGWDEIPVNGRDSMGRSDTLKLKMD 573 Query: 366 -----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 574 VETVDGFSGHADRQGLENFVKTMNPRPEKVLCVHGD 609 >gi|56204960|emb|CAI23182.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 308 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 13/115 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 22 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 73 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV 114 L + I+H H DH GAL P+Y + + R Sbjct: 74 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRK 128 >gi|260790823|ref|XP_002590440.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae] gi|229275634|gb|EEN46451.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae] Length = 597 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 63/427 (14%), Positives = 135/427 (31%), Gaps = 62/427 (14%) Query: 17 IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFI 73 +G + L G + IM+DCG+ +D + FPD T+I + +L + I Sbjct: 6 VGRSCILVSIGGKN----IMLDCGMHMGYND----ERRFPDFTYITQSGTLNDHLDCVII 57 Query: 74 THAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV-------SKKIPCISFQ 124 +H H DH G L + P+Y + + R + + Q Sbjct: 58 SHFHLDHCGCLPYMTEMVGYDGPIYMTHPTKAICPILLEDYRKITVDRKGESQANFFTSQ 117 Query: 125 AGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + + + +I+ ++V+TGD+ + D Sbjct: 118 MIKDCMKKVIPVNLHQTVQVDDELEIKAYYAGHVLGAAMFLIKVGSESVVYTGDYNMTPD 177 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVL 229 LG I L+ +ST A R+ E+ K +++ ++ G VL Sbjct: 178 RHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHETIEKG-GKVL 229 Query: 230 VTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 + F+ + R + + + E I ++ + ++ + Sbjct: 230 IPVFA--LGRAQELCILLETFWERMNIKAPIYFSTGLTEKANNYYRLFITWTNQKIRKTF 287 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTVIFSSR---AIPGN- 338 ++ + + P + + G + L S+ +PG Sbjct: 288 VKRNMFEFKHIKAFDRSYIDNPGPMVVFATPGMLHAGLSLQIFKKWAPDSKNMVIMPGYC 347 Query: 339 --EVAIGHIKNRLVEQGVR----VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 I N + + + + S H + ++ ++ P+ ++ +H Sbjct: 348 VAGTVGHKILNGIRKIEFENKKVLEVRMTVEYMSFSAHADAQGIMQLIRYCEPRNVMLVH 407 Query: 393 GEPLHLV 399 GE + Sbjct: 408 GEEQKMD 414 >gi|296242984|ref|YP_003650471.1| KH-domain/beta-lactamase-domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095568|gb|ADG91519.1| KH-domain/beta-lactamase-domain protein [Thermosphaera aggregans DSM 11486] Length = 651 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 152/447 (34%), Gaps = 72/447 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG E+G + L + +++D G++ D P + D+ + Sbjct: 184 KNNYVRITALGGFREVGRSSILVE----TRESRLLLDMGINTGVMDDPFKAFPYIDVDSL 239 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSK 116 + L + +TH+H DH G + L+ + P+Y + L L+ R S Sbjct: 240 K--LEELDGVIVTHSHLDHVGLVPILYKYGYRGPLYVTKPTRELMIVMLKDLIEVSRRSG 297 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVN-------------HSIPETMALVIRSPV--GNIV 161 + + + + + ++E V I + + + + NIV Sbjct: 298 RYLPFTEKDLTTMILHTITVEYDEVTDVAPDIKLTMYNAGHILGSAIVHLHVGMGLHNIV 357 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+K +L + L+ +ST + E + + + Sbjct: 358 YTGDFKYASTRLLDR-------ANTEFPRVETLIMESTYGSAKQQNRLEAE-AELVNIVK 409 Query: 222 KNAKGCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLG---------------- 258 + + +V +V R + II + A + G + + G Sbjct: 410 RTVERQGIVLIPVFAVGRGQEIILILNEAMKNGLIPKLNVYVEGLVNEVTAIHTQYPEYL 469 Query: 259 -SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI-------ATGSQGEPRSALA 310 S++ + + ++ S + ++ VI G + LA Sbjct: 470 SRSIREAIYRGENPFTADWLKILESGVARPDIVEDRPSVIIATSGMLTGGPAVDYLKLLA 529 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 R + V + T+ + G ++N++ + + + SGH Sbjct: 530 SDPRNSLVFVGYQAEGTLG--RKIKDGMRELTMVVENKVEAVKIDLEVYSIDG---FSGH 584 Query: 371 PYPNDLKRMYQWIRPQ--VLVAIHGEP 395 +L + Q I+P+ ++ HGEP Sbjct: 585 SDQAELVKYAQSIKPKPRKIILNHGEP 611 >gi|206895796|ref|YP_002247650.1| RNA-metabolising metallo-beta-lactamase family [Coprothermobacter proteolyticus DSM 5265] gi|206738413|gb|ACI17491.1| RNA-metabolising metallo-beta-lactamase family [Coprothermobacter proteolyticus DSM 5265] Length = 454 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 71/435 (16%), Positives = 135/435 (31%), Gaps = 88/435 (20%) Query: 52 DLVFPDITF---IMKERKNLMAIFITHAHEDHYGALHDL------------------WSF 90 DL+ + F + + K + + ++HAH DH G L L Sbjct: 8 DLIPANFDFSTDLQQGVKPVGGLLLSHAHLDHAGYLPYLREDLPVTTSVISGALLKSLQD 67 Query: 91 LHVPVYASPFAIGLLEAKRV------------------------------------YERV 114 + +Y S + + Sbjct: 68 TNRQLY-SELIAVVAKELLDTGILKTAKGSPLQPRPFHLLQRPKDVNGFNDNVWNCNYTK 126 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 +P + + ++I++ V+HSIP MA + + G IV+TGD +L Sbjct: 127 KPYLPATPDYLENSCQIAKYNIKAWPVDHSIPGAMAHGVETSEGWIVYTGDLRLHGSKGN 186 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + L L+ + T+ E+ +K+ +++ +G V+ + Sbjct: 187 LTRAFFQEAAQLHP---LLLITEGTHPEETNPVTEEQ-VKQRSMEVVAKTEGLVIADFGA 242 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSS--LKRVVSVA-----------IDVGIIKKDQLFL 281 +V R+ S + +A + R +VL + ++ A + + Sbjct: 243 RNVERLLSFLQVASETQRYLVLTPKDFLMLEYLNYATPEVPNPLRDPWLLMYVAPKGRTD 302 Query: 282 SDESF--GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 E L P E+ + L + + S + P NE Sbjct: 303 GWEDHVRSLVPEEKTVDARRIRSHPDDYILCFSYYDFANLLDIDVHKGSYIYSSSEPFNE 362 Query: 340 ---VAIGHIKNRLVEQGVRVIAEDAEC--------PVHVSGHPYPNDLKRMYQWIRPQVL 388 + IKN + G + + P H SGH + L+ M + IRP+ L Sbjct: 363 EMAMDHEKIKNWIDLFGFHIYGRLGQAAGGKDERDPFHGSGHIHAQGLQEMIETIRPKYL 422 Query: 389 VAIHGEPLHLVAHKE 403 + +H E + Sbjct: 423 IPVHTEKSDFFQQFQ 437 >gi|303244882|ref|ZP_07331209.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] gi|302484759|gb|EFL47696.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] Length = 427 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 76/437 (17%), Positives = 144/437 (32%), Gaps = 65/437 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLM 69 GG E+G + S + I +DCGV +D + P D + PD Sbjct: 7 GGAMEVGRSC----IEVRSDKSNIFLDCGVKLSEDNPEYPVFDKIHPD------------ 50 Query: 70 AIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGL--------LEAKRVYERVSKK--- 117 A+F++HAH DH G+L L +H PVY + + L+ R Sbjct: 51 AVFVSHAHLDHTGSLPILSHLHMHCPVYTTSMTKAITKELLRDSLKIGIEENRELPFNKG 110 Query: 118 ------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDD 170 + G+ ++ F H IP + ++ + + IV+TGD KL Sbjct: 111 DINNILHHHKYVKYGEIYNIRDFEYIYYDAGH-IPGSASIYLNYNNGKKIVYTGDIKLSK 169 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + D + I L+ +ST R + K+ + + + + Sbjct: 170 TRL-TKGADLS----YCDNDIDILIIESTYGNRLHPNRKQLE-KEFLNKVKETVERGGTA 223 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLL----------------GSSLKRVVSVAIDVGII 274 +V R + +I + + + + L+ + Sbjct: 224 IIPVFAVDRSQEVILMLNDLDLDVPIYFDGLGVKITKIMLGQHPKYLRNHKKLKRAFSNT 283 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + I+++T + +S K ++IF+ Sbjct: 284 YTVENEERHYVIKDLKENGGIIVSTAGMLNGGPVIKYISN-----FWNDPKSSLIFTGYQ 338 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + I +L + V + S H ++L+ + + P++L+ HGE Sbjct: 339 VKNTAGRILLETGKLPIGEMMVEPKFEISFYEFSAHAGMDELRTVVKKANPEILIIQHGE 398 Query: 395 PLHLVAHKELALQEGIA 411 + KE A++EG Sbjct: 399 EEAINVFKEWAIEEGFK 415 >gi|323474709|gb|ADX85315.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A] Length = 638 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPRLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKIEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVVEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPLPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSAMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNRGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYLTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A Sbjct: 578 HSDRRQLFNFLRTIEPKPKNIILNHGEASAIKAFANYIRD 617 >gi|15789650|ref|NP_279474.1| mRNA 3'-end processing factor-like protein [Halobacterium sp. NRC-1] gi|169235363|ref|YP_001688563.1| mRNA 3'-end processing factor-like protein [Halobacterium salinarum R1] gi|10580012|gb|AAG18954.1| mRNA 3'-end processing factor homolog [Halobacterium sp. NRC-1] gi|167726429|emb|CAP13214.1| mRNA 3'-end processing factor homolog [Halobacterium salinarum R1] Length = 641 Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 77/461 (16%), Positives = 152/461 (32%), Gaps = 93/461 (20%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI- 58 M+++E + LG E+G + + I++DCG D PG + P + Sbjct: 176 MQDDEYVRVTTLGCCREVGR----ASFVLSTPETRILVDCG------DKPGSEDEVPYLQ 225 Query: 59 --TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + + A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 VQEALAGGANTIDAVILTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSP 156 R CI + GD D+ + H + ++ I Sbjct: 286 AAKEGRAPPYDSEMVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDG 345 Query: 157 VGNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCI----SEK 211 + N+ +GD DD + V D + L+ +ST R SE+ Sbjct: 346 LYNVAFSGDIHYDDTRLFNGAVNDFPR--------VETLVMESTYGGRNDYQTDQEDSER 397 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS----- 259 +K+ I + ++ G VL+ F+ V R + ++ + E+ I L G Sbjct: 398 KLKRVINETYEDG-GKVLIPAFA--VGRSQEMMLVLEEAMREGEIPEMPIHLDGMIWEAT 454 Query: 260 ------------SLKRVVSVAIDVGIIKKDQLFLSDESFGLY---PREQLIVIATGSQGE 304 L+ + + + + +Q I+++T Sbjct: 455 AIHTTYPEYLRDDLRDRIFHSDSNPFLAPQFNHIDGGEEERQAVADDDQCIILSTSGMVS 514 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAEC 363 ++ L ++ T+ F G I ++++ R Sbjct: 515 GGPIMSWL-----EHIAPDPDSTLTFVGYQAQGTLGRRIQSGRDKIPMPDSRSGGRTEHL 569 Query: 364 PVH--------VSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 ++ SGH L+ + + RP+ ++ +HG+ Sbjct: 570 QLNMGVETVDGFSGHADRQGLEDFVRTMNPRPEKVLCVHGD 610 >gi|268324772|emb|CBH38360.1| conserved hypothetical protein, RNA-metabolising metallo-beta-lactamase family [uncultured archaeon] Length = 549 Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 93/545 (17%), Positives = 165/545 (30%), Gaps = 156/545 (28%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCG--VSFPKDD---------------------- 47 GGVGEIG N + + +M+D G + F + Sbjct: 8 GGVGEIGGNKIIVEH----QGTRLMLDFGTRMGFASEFFAEFLNVRSNTELKDKLTIGVL 63 Query: 48 --LPGV---DLVFP----DIT-------------------------FIMKE-RKNLMAIF 72 +PG+ DL+ P D++ +I R + I Sbjct: 64 PMIPGIYRADLIQPTGMEDLSNAAYSRLIVSDSAMLKVPGLVTYEDYIQMHGRSYIDGIL 123 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGL--------------LEAK---------- 108 ++HAH DH G + L +P+Y S L + +K Sbjct: 124 LSHAHLDHTGDIGFL--HHAIPLYCSEDTRTLVVAIDAVTNFKSKAIRSKGSSIAFNKTG 181 Query: 109 ------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV----G 158 ++ + C G+ D+G F + + V+HS+P + V+ V Sbjct: 182 ALAGCPKIVHKDDLVRDCRIMADGEVTDIGPFQVTMIAVDHSVPGAASYVLACDVNGKPF 241 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I++TGD + T + GI ++C+ T + ++E+ ++ I Sbjct: 242 KILYTGDIRFHGT----RGTTIEDYVRAVGTGIDIMICEGTRIES-DSSLTEEKVRAKIA 296 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID-------- 270 + G VLV +R +I + A+ GR V+ + + Sbjct: 297 SEIAETDGLVLVDFSWKDTTRYETINEAAKSCGRTFVINARLAYVLNQLGQTPLPETVKV 356 Query: 271 ---------------VGIIKKDQLFLSDESFGLY--PREQLIVIATGSQGEPRSALAQLS 313 + + +++ + +V L Sbjct: 357 FLKRKASCFYSPTDYAQYKHEYGFSIDKDTWTQDSSHYDNGLVADELKSNPSDYVLMLSY 416 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPG--------NEVAIGHIKNRLVEQGV-------RVIA 358 + L +++ I SR I E+ N L G+ V Sbjct: 417 YDLGQLFDLTDENGKILGSRYIRAQCEPFSDEMELDEERFINWLDAFGIGYELGKTPVPD 476 Query: 359 EDAEC----------PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 HVSGH +LK + + I P++L +H E EL E Sbjct: 477 GCTNPNCTKLRKRIVRSHVSGHASRPELKELIEKINPELLFPVHTERP--EVFAELVKGE 534 Query: 409 GIACV 413 I + Sbjct: 535 DIEVI 539 >gi|289580012|ref|YP_003478478.1| KH-domain/beta-lactamase-domain protein [Natrialba magadii ATCC 43099] gi|289529565|gb|ADD03916.1| KH-domain/beta-lactamase-domain protein [Natrialba magadii ATCC 43099] Length = 644 Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 98/465 (21%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M ++E + LG E+G + + I++DCG D PG + P + Sbjct: 176 MSDDEYVRISTLGCCREVGR----ASFILSTPETRILVDCG------DKPGAEGEVPYLH 225 Query: 60 FIMK---ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + + A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 APEAFGAGPETIDAVVLTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSP 156 R CI + GD D+ + H + ++ I Sbjct: 286 AAKEGRTPPYDSEMVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDG 345 Query: 157 VGNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + N+ +GD DD + V D + L+ +ST R ++ ++ Sbjct: 346 LYNVCFSGDIHYDDTRLFNGAVNDFPR--------VETLVLESTYGGRNDYQTDQEDSEE 397 Query: 216 NIYDIMKNAK---GCVLVTTFSSSVSRIRSI---IDIAEQIG----RKIVLLGS------ 259 + +++ G V++ F+ V R + I I+ A + G + L G Sbjct: 398 KLKEVINETYEKGGKVVIPAFA--VGRSQEIMLVIEEAMRNGDIPSMPVHLDGMIWEATA 455 Query: 260 -----------SLKRVVSVAIDVGIIKKDQLFLSDESFGLY---PREQLIVIATGSQGEP 305 L+ + + + ++ + +Q I+++T Sbjct: 456 IHTTYPEYLRDELRDRIFHEDENPFLAEEFNHIDGGEEERQEVADGDQCIILSTSGMVTG 515 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP- 364 ++ L ++ + T++F G I+N E + Sbjct: 516 GPIMSWLG-----HIGPDPESTMVFVGYQAQG--TLGRRIQNGWDEIPTSEVGAMGSGNG 568 Query: 365 -------------VHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 569 RGTLALNLDVETVDGFSGHADRAGLENFVKTMNPRPEKVLCVHGD 613 >gi|323477437|gb|ADX82675.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4] Length = 638 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPRLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKIEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVVEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPLPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSAMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNRGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A Sbjct: 578 HSDRRQLFNFLRTIEPKPKNIILNHGEASAIKAFANYIRD 617 >gi|167045029|gb|ABZ09693.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_APKG8G15] Length = 643 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 81/453 (17%), Positives = 149/453 (32%), Gaps = 82/453 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E+ L LGG G++G + L + +++DCG++ P P FP + + Sbjct: 182 QKAEVSLLTLGGFGQVGRSCMLL----TTPDSKVLVDCGIN-PGARSPR--EAFPRLDWA 234 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----AKRVYERVSK 116 L A+ I HAH DH G L L + P+Y + + ++ Sbjct: 235 NITLDELDAVVIGHAHLDHTGFLPVLLKYGYKGPIYCTEPTLPMMNLIQLDAIKVAVAQG 294 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPE---------------TMALVIRSPVGNIV 161 + P + + +V +I V P+ T I + N V Sbjct: 295 RTPMYAERDVFQVMRQTITIPYGAVTDISPDIKLVLSNAGHILGSATCHFHIGNGEHNFV 354 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 +TGD K +L T+ + L+ +ST +E + ++ I Sbjct: 355 YTGDIKYGKSMLLESANTNYPR--------VETLLIESTYGAKEDIQPDRQEVESAFIAS 406 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG-------------- 258 + K V +V R + ++ + +Q + + G Sbjct: 407 VNSVLKEGGKVLIPIPAVGRAQELMLVIDQYMKSGELVEAPVFMEGMIQEATAIHEAFPE 466 Query: 259 ---SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATGSQGEPRSALAQL 312 LK+ + D + ++ + P + I+IAT E L Sbjct: 467 YLVRDLKKKILETDDNPFDSEYFTNITHQDERDEPLRENSPCIIIATSGMLEGGPVL--- 523 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED---------AEC 363 RN+ K+ ++F S + G + + + + E Sbjct: 524 --DYFRNIAPHTKNKILFVSYQVNG--TLGRRVMDGARQVSILGKEGRIEVVSINCSTER 579 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQV--LVAIHGE 394 SGH N L +RP++ ++ HGE Sbjct: 580 LDGFSGHSDYNQLMSFVHRLRPKLRRVLVNHGE 612 >gi|305662491|ref|YP_003858779.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM 17230] gi|304377060|gb|ADM26899.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM 17230] Length = 641 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 67/441 (15%), Positives = 139/441 (31%), Gaps = 63/441 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + L ++ +++D G++ + P FP I + Sbjct: 177 SNYVRVTFLGGAQEVGRSAILVE----TAESRVLLDFGLNPGRSLSPNA---FPRIDLLN 229 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG----LLEAKRVYERVSKK 117 E ++ A+ +THAH DH G + L+ + VY + LL+ Sbjct: 230 IEPDDIDAVIVTHAHLDHCGLVPYLFKYGFRGAVYTTDATRDLMVLLLKDYLEISEREGT 289 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETM---------------ALVIRSPVGNIVH 162 P + + +++ + +++ V P+ L I + NIV+ Sbjct: 290 EPPFTLRDVEQMLLHTITLKYDVVTDIAPDIRLTLYNAGHILGSAIAHLHIGNGFHNIVY 349 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDI 220 TGD+K +L + ++ +ST + +E + + + + Sbjct: 350 TGDFKFGRTRLLDR-------ANYEFPRVDTIIMESTYGATEQPARDRAEDELIRIVKET 402 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQ 278 ++ + + I+ A + + KI + + V+ + Sbjct: 403 YDRGGKVLIPSLSVGRAQEVMLILADAMKQNKLPKIPVYIEGMIHEVTAIHTAYPDLLSK 462 Query: 279 LFLSDESFGLYPREQLIVIATGSQGE------------PRSALAQLSRG----EMRNVKL 322 G P + I + + L+ G + + Sbjct: 463 ELGQRLKSGENPFDYETFIRLEGREPRTEIVESSEPAIIIATSGMLTGGPAVEYFKLMAS 522 Query: 323 AEKDTVIFSSRAIPGNEVAIGH-------IKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 +++F S + G N + V I SGH Sbjct: 523 NPNHSLVFVSYQVEGTLGRRIRDGAREVAFVNERGKVEVIRIKMQVYSIEGFSGHSDRPQ 582 Query: 376 LKRMYQWIRPQ--VLVAIHGE 394 L + I P+ + +HGE Sbjct: 583 LLEYLRHIEPKPSTAILVHGE 603 >gi|292655937|ref|YP_003535834.1| mRNA 3-end processing factor [Haloferax volcanii DS2] gi|291371389|gb|ADE03616.1| mRNA 3-end processing factor [Haloferax volcanii DS2] Length = 410 Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 112/356 (31%), Gaps = 62/356 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG E+G + L +++D G+ V V PD Sbjct: 1 MKLQF--LGGAEEVGRSAILV-------NDSLLLDYGMLTGNPPQFPVGSVEPD------ 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFA----IGLLEAKRVYERVSKKI 118 A+ ++H H DH G + L S P V+ +P L S Sbjct: 46 ------AVVVSHGHLDHVGTVPSLLSGDDWPAVHWTPPTDELARTLARDTLKLHGGSYNC 99 Query: 119 PCIS------------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P G+ + + H IP + +++ +++T D+ Sbjct: 100 PFTETHVRRMTQQSAHHDYGESFEAAGHEVTFYNAGH-IPGSAHVLVDDGETRLLYTADF 158 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 DD ++ T ++C+ST + E +++ + ++ Sbjct: 159 HTDDQRLVSGTT--------ARPDADVVICESTYSDVEHE--DRATVEERFVESVRTTVW 208 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 G V+V F+ + R + ++ + + + G + ++ ++ D Sbjct: 209 EGGTVVVPAFA--IGRTQELLMVLDAHDIDCYVDG-------MGVRVLEMLGNHPDYVRD 259 Query: 284 ESFGLYPREQLIVIATGSQGEPR-SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + + V++ R + + + T I R P N Sbjct: 260 AAALKRAKSNARVVSGRDGQRKRIARENSVIVTTSGMLSGGPAMTYIPEIRDDPTN 315 >gi|320449268|ref|YP_004201364.1| metallo-beta-lactamase family protein [Thermus scotoductus SA-01] gi|320149437|gb|ADW20815.1| metallo-beta-lactamase family protein [Thermus scotoductus SA-01] Length = 431 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 67/435 (15%), Positives = 144/435 (33%), Gaps = 79/435 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +P G E+ + L + + I++DCG+ +++ + T + Sbjct: 1 MRIVPFGAAREVTGSCHLL----LAEGRKILLDCGMFQGREEEK-------NHTPFGFDP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + A+ +THAH DH G L L+ PVYA+ L++ + P + Sbjct: 50 QAVDAVVLTHAHLDHVGRLPKLFREGYRGPVYATQATFLLMQIILQDALKVMETPFFEEE 109 Query: 125 AG-------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + + +G ++ + H +P + +V++ +V++GD Sbjct: 110 DVEEALRHVRLLEFGEWLRLGDLTLTFGQAGH-LPGSAFVVVQGEGKTLVYSGDLGNRQK 168 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNAKGCVL 229 +L D ++C+ T R +++ + + G V Sbjct: 169 TVL---PDPSL-----PPKADLILCEGTYGDRPHR-SFAATVQEFLEILERTLGQGGKVF 219 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 + +F+ V R + I+ + + G ++ + + ++ + S + Sbjct: 220 IPSFA--VERAQEILFLLYENGHRLPQAP----IYLDSPMAERVLDLYPRLVRYFSEEV- 272 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAI------ 342 Q +A + PR S E + + VI + S + G + Sbjct: 273 ---QAYFLAGKNPFRPRGLRVVESVEESKALNREPGPMVIIAGSGMLTGGRILHHLKHGL 329 Query: 343 -------------------GHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDLKRM 379 I R + VH SGH ++L Sbjct: 330 SDPKNTLVFVGYQPRGGLGAEIIQRPERIRLLGQEIPLRASVHTLGGFSGHAGQDELLDW 389 Query: 380 YQWIRPQVLVAIHGE 394 +P+ ++ +HGE Sbjct: 390 LHG-QPR-VILVHGE 402 >gi|209875817|ref|XP_002139351.1| RNA-metabolising metallo-beta-lactamase family protein [Cryptosporidium muris RN66] gi|209554957|gb|EEA05002.1| RNA-metabolising metallo-beta-lactamase family protein [Cryptosporidium muris RN66] Length = 797 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 73/482 (15%), Positives = 137/482 (28%), Gaps = 83/482 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLG ++G + L K +M+DCG+ D D +PD T I Sbjct: 3 ITVTPLGAGQDVGRSCILVRIY----EKVVMLDCGMHMGYKD----DRRYPDFTLISSSL 54 Query: 66 KNL------MAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGL------------- 104 + + I+H H DH GAL + P+ + + Sbjct: 55 DPVVINSLVDVVVISHYHLDHCGALPYFTEKIGYSGPIIMTYPTKAVSPILLADCCKVME 114 Query: 105 ---LEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN------------------- 142 + +K + ++ + VG +V Sbjct: 115 QKNILSKFGSDINTESTDILKPVDPQHFSVGDVWKCMEKVTAIQLHQTISVNGINITPYY 174 Query: 143 -HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 + + +IV+TGD+ + D LG +I L+ +ST A Sbjct: 175 AGHVLGASMFHVEVGNESIVYTGDYNMVRDRHLGP-------ASIKKLFPDVLLSESTYA 227 Query: 202 M--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR------SIIDIAEQIGRK 253 R +E+ + + ++ G VL+ F+ V R + Q+ Sbjct: 228 TYIRPSRRSTERIFCEMVLQCLEKG-GKVLIPVFA--VGRAQELCILLEFFWRRMQLRYP 284 Query: 254 IVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 I G+ ++ L SF V+ + L Sbjct: 285 IYFGGAMTEKSSLYYQLYTNWTNTALSDDLFSFPHVLPYDRSVLTNTGPAVLFATPGMLH 344 Query: 314 RG----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-- 367 G + + I + G I + + + Sbjct: 345 AGLSLQAFKCWAPDPNNLTIIPGFCVAG--TLGARIIAGAKRIILDPKDPSSSIDIRCDV 402 Query: 368 -----SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 S H ++ + Q I P +V +HGE +++ ++ NG + Sbjct: 403 KYLSFSSHADSIGIQSLIQHIEPDNIVFLHGERQGMLSMASFVQEQFQIPTFCPHNGSTV 462 Query: 423 RL 424 + Sbjct: 463 SI 464 >gi|56204958|emb|CAI23180.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 379 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 13/115 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 10 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 61 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV 114 L + I+H H DH GAL P+Y + + R Sbjct: 62 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRK 116 >gi|303231279|ref|ZP_07318016.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514054|gb|EFL56059.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 391 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 71/395 (17%), Positives = 141/395 (35%), Gaps = 45/395 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--VSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 G +IG + ++ I++D G +S + P ++L DI + K + Sbjct: 8 GTHQIGGSA----IEISTASTRIILDFGNELSLDEKYTP-INL---DIDGVTKGILDCDG 59 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP---CISFQAGD 127 I I+H H DH G L +P+Y + + ++ + +F+ G+ Sbjct: 60 IVISHYHMDHLGQLTSALPE--IPLYMGELSKEVAMIATQHQDKDLYLRLLDANTFRGGE 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 +G I + ++HS ++ VI + +++TGD+++ + L Sbjct: 118 AFTIGNIHIRPLVIDHSAVDSYMFVIEAEGKRVLYTGDFRM----HGVRGHVLEKLIRTY 173 Query: 188 NEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + L+ + T+ R ISE+ + +I +++ K V V S+++ RI I Sbjct: 174 IGNVDVLITEGTSLSRNAHDGISEREVLDDISSYIQDGK-YVFVMCSSTNIDRIMGIWHN 232 Query: 247 AEQIGRKIVLLGS-----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I ++ V + L L ++ Y + V Sbjct: 233 MPTDKVLICDAYQKRILDTVIDNVYYNSSLYRRPDSPLVLDIGAYPKYYMDNGFV----- 287 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 +L + + + +K KD V G +K+ L + Sbjct: 288 ------SLVRGTENYISQIKKFPKDDVRIIYSMWTGYIEENLALKDLLDTYPSYI----- 336 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 H SGH DL + + P V++ +H + Sbjct: 337 ---YHASGHVCKADLVKFIDMVNPDVIIPVHTDSP 368 >gi|269860949|ref|XP_002650191.1| cleavage and polyadenylation specificity factor subunit [Enterocytozoon bieneusi H348] gi|220066365|gb|EED43849.1| cleavage and polyadenylation specificity factor subunit [Enterocytozoon bieneusi H348] Length = 501 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 72/459 (15%), Positives = 144/459 (31%), Gaps = 60/459 (13%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--- 64 +PLG +IG + + K IM DCG+ +D P+ + + Sbjct: 3 VIPLGAGQDIGKSCIVV----TIKNKTIMFDCGIHLGYNDSRK----LPNFDYFNENHHG 54 Query: 65 RKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLL-----------EAKRVY 111 R+ + I I+H H DH G+L + ++ + L E K Sbjct: 55 RRPVDIIVISHFHIDHCGSLPYFVETTQFNGLIFMTHPTKAALPIVLEDCKKIFENKNQM 114 Query: 112 ERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVH 162 E+ I+ + + F I H I +R +V+ Sbjct: 115 EKPLYTTEQINNCLSKVIALNMEETYEIEQEFIIRPYYAGHVI-GAAMFFVRYLDETVVY 173 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ D L I L+ +ST + + ++ I + K Sbjct: 174 TGDFSTIPDRYL-------RAATIDCLYPDLLITESTYGNIV-RDLRKSKEREMIMAVHK 225 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIG------RKIVLLGSSLKRVVSVAIDVGIIKK 276 V ++ R + I + + I + ++ + + Sbjct: 226 TIDIGGKVLIPIFALGRAQEICLLLKNYCERIQLSVPIYFTTGLIDKINDIYLKFASYTN 285 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEP-----RSALAQLSRGE----MRNVKLAEKDT 327 + L + + + + P + A L G +++ K+T Sbjct: 286 ESLEQPLKIRSILNSKFVKPFEKEYLNSPGPMIIFATPAMLINGPSLNIFKSICHDSKNT 345 Query: 328 VIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 +I G E I +K + + + I + +SGH + ++ + +P Sbjct: 346 IILPGYCSKGTIGEKIINGLKRIEIGKNIYDI-NMKVYNISLSGHADMTGILKIIEQCKP 404 Query: 386 QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 ++ +HG+ + KE E V N ++ + Sbjct: 405 SNVMLVHGDKGKMNILKEKIKVEFDIPVYYPPNYTLIEI 443 >gi|20091343|ref|NP_617418.1| mRNA 3-end processing factor [Methanosarcina acetivorans C2A] gi|19916474|gb|AAM05898.1| mRNA 3-end processing factor [Methanosarcina acetivorans C2A] Length = 416 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 129/399 (32%), Gaps = 65/399 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMA 70 GG E+G + L + I++D G+ + + PG A Sbjct: 10 GGCREVGRSGLLV-------NEEILLDYGIKAGEIPEYPG-------------NGMEPKA 49 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIG---LL---EAKRVYERVSK-------- 116 + ++H H DH GA+ +L +++ V+ +P LL K +S Sbjct: 50 VLVSHGHLDHCGAVPNLM-YMNPEVFMTPPTAEFTNLLGRDTLKLAETTLSGVAPFDPND 108 Query: 117 ----KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDD 171 G+ +S+ H IP + + S ++++TGD+ + + Sbjct: 109 LQRVNQLTRRKDYGEAFKTQGYSVCFYNAGH-IPGASGIYLESKSGESLLYTGDFSMKET 167 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 ++ + L+ +ST E E K+ I +++ + Sbjct: 168 RLVPGA---EKFPE-----ADTLVLESTYFGEEHVPRKETE-KRFIDSVLETLERGGTAL 218 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLG---------SSLKRVVSVAIDVGIIKKDQLFLS 282 + ++ R + I+ + + G + G + + + + Sbjct: 219 IPAFAIGRTQEILMLLDAHGITAYVDGMGRDVYKLLRKYPEYLRNPELLDRAFDRAISVK 278 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 D+ +E +++ T L LS + V+ + + G + Sbjct: 279 DKQRESVLKEPSVIVTTAGMLNGGPVLYYLS-----QLYRDPNSKVLLTGYQVEGTNGRL 333 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 + +G + + S H ++LK++ + Sbjct: 334 ALNHGVIETRGDVLALKPKIEQYDFSAHSGDSELKKLVK 372 >gi|315426740|dbj|BAJ48364.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 467 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 148/443 (33%), Gaps = 71/443 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF------------PKDDLPGVDLV----F 55 G G+IG N L R + +D GV F P+ D V Sbjct: 20 GAAGQIGGNKILLE-----DRSKVFLDFGVDFNTRSRYFSTFLQPRRFALVRDYVTTGVL 74 Query: 56 PDITFIMKERKNL--MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER 113 P + + ++ A+ ITH H DHYG L +P+Y L++A+ ++ Sbjct: 75 PPLKGLYEKEGTPFAEAVVITHGHLDHYGHASLLRP--DIPLYMGETTRLLIQARENTKQ 132 Query: 114 VSKKIPCISFQAG--------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 S + + K+ I V V+HSIP LVI + G + +TGD Sbjct: 133 KSPENLFNKNEEHPVEVFRTGSKLVFEDAIIYPVHVDHSIPAAYGLVIETGEGVLAYTGD 192 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-A 224 ++ D + L+ + T +E +KK + + Sbjct: 193 LRM-HGPKSEMTHDFV--EKCVKMNVETLVIEGTRVDETDV-STEDDVKKELTRVAAQVG 248 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 V V R+ +++ +AE + R + + +++ G ++ Sbjct: 249 DKLVSVVVAMMDFDRLNTVLSVAENLDRVVAISLHH-ANLLTTLKTGGARMNIPELRDEK 307 Query: 285 ----------------SFGLYPREQLIVIATGSQGEPR----SALAQLSRGEM----RNV 320 + + E + I T E R L LSR E ++ Sbjct: 308 LVAFLERRRTGTYSKTDYPSWQAELIEKIPTVGDEEIRRDQKKYLLVLSRAEDIIKLSDI 367 Query: 321 KLAEKDTVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + I S+ E + I N + +R +H SGH DL + Sbjct: 368 EPEPGSLFILSTSEAHSEEQMLEEERIHNWVNLLDLRYEH------IHSSGHAPQKDLIK 421 Query: 379 MYQWIRPQVLVAIHGEPLHLVAH 401 + + I P+ ++ +H L+ Sbjct: 422 IVEEINPRKIIPVHTLKPMLMKQ 444 >gi|326508058|dbj|BAJ86772.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 704 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 135/465 (29%), Gaps = 73/465 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++V PLG E+G + + + ++ DCG+ + P I Sbjct: 34 DQMVVTPLGAGSEVGRSCVHMTF----KGRTVLFDCGIHPAYSGM----AALPYFDEID- 84 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + Sbjct: 85 -PSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSKVSVE 143 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ I +TG Sbjct: 144 DMLFDEQDIIRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRIRYTG 202 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST +++ + EK I++ + Sbjct: 203 DYSREEDRHL-------KAAEIPQFSPDICIIESTYGVQQHQPRHVREKRFTDAIHNTVS 255 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 256 QG-GRVLIPAFA--LGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKCMAVYQTYINS 312 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + + V + P S + LSR + Sbjct: 313 MNERIRNQFAQSNPFHFKHIDPLNSIDNFHDVGPSVVMASPGSLQSGLSRQLFDKWCTDK 372 Query: 325 KDTVIFSSRAIPG-------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 K+T + A+ G NE + N L + S H Sbjct: 373 KNTCVIPGYAVEGSLAKTIINEPREVTLANGLTA-----PLNMQIFYISFSAHADFPQTS 427 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 + P ++ +HGE + K +L Q V Sbjct: 428 GFLGELCPPNIILVHGEANEMGRLKQKLITQFDGTNTKIVSPKNC 472 >gi|219121689|ref|XP_002181194.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407180|gb|EEC47117.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 602 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 148/448 (33%), Gaps = 79/448 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + L + + I++DCG+ D L G P + I Sbjct: 2 EDIMSITPLGSGQEVGRSCHLLEFRGMT----ILLDCGIHPGYDGLNG----LPYLDRIE 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL-------------LEA 107 + + ITH H DH +L L ++ + + ++ Sbjct: 54 --PDQVDVLLITHFHLDHVASLPYLTERTSFKGRIFMTHPTKAVTRLLLGDYLRLLQMKN 111 Query: 108 KRVYERVSKKIPCISF-------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + + + S V VG S ++ H + + I Sbjct: 112 AKPEDVLYTEADLQSCIDKIELMDFHTTVTVGGLSFYALNAGH-VLGACMFFLSLGGRKI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIY 218 ++TGD+ ++DD L I E L+ ++T ++ +E+ + I Sbjct: 171 LYTGDYSMEDDRHLMA-------AEIPAESPDVLIVEATYGVQVHASRAEREARFTGTIE 223 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVL----LGSSLKRVVS 266 ++ C++ ++ R + ++ I ++ I +L+ + Sbjct: 224 RVISRGGRCLI---PVFALGRAQELLLILDEYWQANPHLQNIPIWYASKLASRALRVYQT 280 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIV-----------IATGSQGEPRSALAQLSRG 315 A + + Q+ +S+ + + + + S G +S +++ Sbjct: 281 YANMMNARIRSQMDVSNPFRFRFIQNLKSIDVNSFDDSGPSVVFASPGMLQSGVSRQLFD 340 Query: 316 ----EMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + +N L V + ++ I + ++ R V V S H Sbjct: 341 RWASDHKNGVLIAGYAVEHTLAKEIMAQPKEVVTLEGRRQPLNALVDY------VSFSAH 394 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 + + P+ ++ +HG+ + Sbjct: 395 VDFVQNRSFINQVAPKHIILVHGQKDEM 422 >gi|70608064|ref|YP_256934.1| hypothetical protein Saci_2362 [Sulfolobus acidocaldarius DSM 639] gi|68568712|gb|AAY81641.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639] Length = 422 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 107/305 (35%), Gaps = 36/305 (11%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LGG E+G I++D GV+F ++D P P Sbjct: 1 MPMDSVKI--LGGGREVGR----AAIEVSKGDSAIILDYGVNFDQNDNPN----LP---- 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE------RV 114 + + + ++H+H DH G+L PV+ + + E R+ Sbjct: 47 LQETPNRVKGFVVSHSHLDHVGSLPLYQISGSYPVFGTMMTKLITELMLKDFLKLSGARL 106 Query: 115 SKKIPCI--------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + + + ++ F +E H IP + + +++ NIV+TGD Sbjct: 107 PFEWMEVKRTMDNFRTVNYYQEFEIDTFKVELGNAGH-IPGSSMIKVKTDKHNIVYTGDT 165 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 + + ++G D + L L+ +ST E ++ + + +G Sbjct: 166 NVINTKLVG-PADLNFLSD-----ADVLVIESTYGKYNHPKREEVE-EEFYNSVREVVEG 218 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 +V S S++R + I+ + + + + ++ + + + Sbjct: 219 GGVVLVPSFSLARSQEILALLADKKFDYPVYYDGMVKEITELMIQNPEFINNYDALKRAH 278 Query: 287 GLYPR 291 Y Sbjct: 279 KFYRY 283 >gi|320101459|ref|YP_004177051.1| KH-domain/beta-lactamase-domain-containing protein [Desulfurococcus mucosus DSM 2162] gi|319753811|gb|ADV65569.1| KH-domain/beta-lactamase-domain protein [Desulfurococcus mucosus DSM 2162] Length = 647 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 148/449 (32%), Gaps = 54/449 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KN + LGG E+G + L + +++D G++ D PG ++ + Sbjct: 184 KNNYVKVTGLGGFREVGRSSILVE----TRESKVLLDLGINTGAIDDPGKAYPLLEVDSL 239 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----ERVSK 116 L + +THAH DH G + L+ + PVY + L+ R S Sbjct: 240 --RLDELDGVIVTHAHLDHVGLVPVLYKYGYRGPVYVTKPTRELMIVMLKDLVDVTRRSG 297 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVN-------------HSIPETMALVIRSPV--GNIV 161 + S + + + +++ V I + + + + NIV Sbjct: 298 RYIPFSEKDISTMLLHTITVDYDEVTDVAPDIKLTMYNAGHILGSAIVHLHVGMGLHNIV 357 Query: 162 HTGDWKL-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG------TCISEKGIK 214 +TGD+K D + T + + EG A E +E+ Sbjct: 358 YTGDFKYSDSRLLNKANTVFPRVETLIMEGTYGATLQENRAQAEQGLVDIVKRTAERK-G 416 Query: 215 KNIYDIMKNAKGCVLV-----TTFSSSVSRIRSIIDIAEQ-----IGRKIVLLGSSLKRV 264 + + +G ++ + + R+ ++ + L SL+ Sbjct: 417 IVLIPVFAVGRGQEIILILNEAMKTGRIPRMNIYVEGLVNEVTAIHTQYPEYLNRSLREA 476 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG----SQGEPRSALAQLSRGEMRNV 320 + + + + S + ++ VI + G L L+ E ++ Sbjct: 477 IYNGDNPFTSEWLKPIESGVARPDIVEDRPSVIIATSGMLTGGPAVDYLRLLAGDERNSL 536 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHI-KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 R I + + +NR+ +++ E SGH +L Sbjct: 537 VFVGYQAEGTLGRKIKDGAREVTMVSENRVEAIHIKLEVYSIEG---FSGHSDQRELLEY 593 Query: 380 YQWI--RPQVLVAIHGEPLHLVAHKELAL 406 + I RP+ ++ HGEP L A L Sbjct: 594 ARDISPRPRRILLNHGEPSALSALSTLLK 622 >gi|284174985|ref|ZP_06388954.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus 98/2] Length = 638 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 150/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPKLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKMEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSGMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNKGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A + Sbjct: 578 HSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIRE 617 >gi|242053629|ref|XP_002455960.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor] gi|241927935|gb|EES01080.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor] Length = 558 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 62/434 (14%), Positives = 134/434 (30%), Gaps = 65/434 (14%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI-TFIMKERKN-- 67 LG E+G + + G K +M DCG+ D +PD + Sbjct: 8 LGAGQEVGKSCVVVTIG----GKRVMFDCGMHMGYHDH----RHYPDFARALAAWGAPDF 59 Query: 68 ---LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--------- 113 + + ITH H DH GAL H P+Y + L R Sbjct: 60 TTAISCVVITHFHLDHIGALPYFTEICGYHGPIYMTYPTKALAPFMLEDYRKVTMDQRGE 119 Query: 114 ---------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + I + V + + + + +V+TG Sbjct: 120 EEQYSYEDILRCMKKVIPMDLKQTIQVDKDLVIRAYYAGHVIGAAMIYAKVGDAAMVYTG 179 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + D LG I + + L+ +ST A + ++ + + K Sbjct: 180 DYNMTPDRHLGA-------AQIDHLKLDLLITESTYA-KTIRDSKHAREREFLKAVHKCV 231 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLL---GSSLKRVVSVAIDVGIIKKD 277 G V + ++ R + + + + K+ + G +++ V + +G Sbjct: 232 SGGGKVLIPTFALGRAQELCMLLDDYWERMDLKVPIYFSAGLTIQANVYYKMLIG-WTSQ 290 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTV 328 ++ S + + + P + + G + +EK+ + Sbjct: 291 KIKDSHAVHNPFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLI 350 Query: 329 IFSSRAIPGNEVAIGHIK----NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + G + R+ + + + + S H + + +++ Sbjct: 351 TLPGYCVSG--TIGHKLMCGKPTRIDYKDIHIDVRCQIHQLAFSPHTDSKGIMDLTEFLS 408 Query: 385 PQVLVAIHGEPLHL 398 P+ ++ +HGE + Sbjct: 409 PKHVILVHGEKPQM 422 >gi|261602429|gb|ACX92032.1| KH-domain/beta-lactamase-domain protein [Sulfolobus solfataricus 98/2] Length = 635 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 150/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 175 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPKLDID 228 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 229 QLKMEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEG 288 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 289 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSGMAHLHIGDGKHNIV 348 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 349 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 401 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 402 TLNKGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 459 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 460 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 514 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 515 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 574 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A + Sbjct: 575 HSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIRE 614 >gi|15897661|ref|NP_342266.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] gi|6015715|emb|CAB57542.1| mRNA 3'-end polyadenylation factor [Sulfolobus solfataricus P2] gi|13813930|gb|AAK41056.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] Length = 639 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 150/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 179 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPKLDID 232 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 233 QLKMEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEG 292 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 293 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSGMAHLHIGDGKHNIV 352 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 353 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 405 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 406 TLNKGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 463 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 464 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 518 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 519 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 578 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A + Sbjct: 579 HSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIRE 618 >gi|257388099|ref|YP_003177872.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257170406|gb|ACV48165.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 640 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 78/449 (17%), Positives = 141/449 (31%), Gaps = 77/449 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD---ITF 60 + + LG E+G + + I+IDCG D PG + P Sbjct: 180 DWVRLTTLGCCREVGRAAFIL----STPDSRILIDCG------DKPGAEGEVPYLQAPEA 229 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVS 115 + +++ A+ +THAH DH + L+ + P+Y + L+ Sbjct: 230 LAAGPQSIDAVVLTHAHLDHSALIPILFKYGYDGPIYTTAPTRDLMGLLQLDYLDVAAKE 289 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDD 170 + P Q +E V P+ A I H GD + Sbjct: 290 GRAPPYESQQVRDALKHTIPVEYGNVTDIAPDIKLTMHNAGHILGAAVTHFHIGDGHYNV 349 Query: 171 DAI-LGDVTDKDSL--CAIGNEGILALMCDSTNAMREGTCI----SEKGIKKNIYDIMKN 223 TD L + L+ +ST + SE+ +KK I + Sbjct: 350 AFSGDIHYTDTRLLDGAVNDFPRVETLVLESTYGGKNDYQTDQADSERVLKKAINEAHDR 409 Query: 224 AKGCVLVTTFSSSVSRIRSII---DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 G +L+ F+ V R + ++ + A + G I + L ++ A + + L Sbjct: 410 G-GKILIPAFA--VGRSQELMLVLEEAMRSG-DIPTVPVYLDGMIREATAIHTAYPEYLR 465 Query: 281 LSDESFGLYPREQ-------------------------LIVIATGSQGEPRSALAQLSRG 315 LY E I++ T ++ L Sbjct: 466 DDLRQRILYEDENPFLAEQFQQVDGGQEMRQDIADDEPCIILTTSGMVTGGPVMSWL--- 522 Query: 316 EMRNVKLAEKDTVIFSSRAIPGN-EVAIGH------IKNRLVEQGVRVIAED-AECPVHV 367 R + +T++F G I + + + RV + E Sbjct: 523 --RLLGSDPDNTMMFVGYQAEGTLGRQIQRGQDEITLSDGSGPRAERVSLKMEIETVDGF 580 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 581 SGHADRQGLETFVETMHPRPEKVICVHGD 609 >gi|50363261|gb|AAT75333.1| cleavage polyadenylation specificity factor CPSF73 [Trypanosoma cruzi] Length = 762 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 34 SSDEVEILPIGSGGEVGRSCVILRY----KGRSVMLDCG-NHPAKS--GLDS-LPFFDSI 85 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE-RVSKKI 118 + + ITH H DH GAL V+ + + RV Sbjct: 86 --RCDEIDLVLITHFHLDHCGALPYFCEQTAFKGRVFMTSATKAFYKMVMNDFLRVGASA 143 Query: 119 PCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I ++V V + H + ++ ++TG Sbjct: 144 NDIVTNEWLQSTIEKIETVEYHEEVTVNGIRFQPFNAGH-VLGAALFMVDIAGMKTLYTG 202 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 D+ V D+ L + + L+ +STN Sbjct: 203 DFS--------RVPDRHLLGAEVPSYSPDILIAESTNG 232 >gi|261403765|ref|YP_003247989.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] gi|261370758|gb|ACX73507.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] Length = 421 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/433 (17%), Positives = 145/433 (33%), Gaps = 77/433 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IGM+ S + I++DCG+S ++P VD K++ A+ Sbjct: 8 GGCQQIGMSCVEVE----SQKGKILLDCGLSPDTGEIPKVD------------DKSIDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGL----------LEAKRVYERVSKKIPCI 121 I+HAH DH GAL +Y + L L+ E + + + Sbjct: 52 IISHAHLDHCGALPFY--KFK-KIYCTHPTADLMFITWRDTLNLKKAFGEEDIQNAMSSV 108 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA-ILGDVT 178 ++ + H I + ++ + I++TGD + +L T Sbjct: 109 ECLNYYEERSINDNIKFKFYNAGH-ILGSASIYLEVDGKKILYTGDINENVSRTLLSADT 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSS 235 D D I L+ +ST + K +++ + + + G V++ F+ Sbjct: 168 DFDE--------IDVLIVESTYGSPLDVKPARKTLERQLIEEIAETIENGGKVIIPVFA- 218 Query: 236 SVSRIRSIIDIAEQIGRK------IVLLGSSLKRVVSVAIDVGIIKKDQL---------- 279 + R + I+ I R + SL +V + ++ Sbjct: 219 -IGRAQEILLILNNYMRSGNLTEVPIYTDGSLIHATAVYMSYTNWLNPKIKNMIENGINP 277 Query: 280 --FLSDESFGLYPREQLIVIATGS----QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + L ++ +I + S G L L + + + + Sbjct: 278 FGEIKKADDNLVFNKEPCIIVSTSGMVQGGPILKYLKLLKDPKNKLILTGYQAEGTIGRE 337 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIH 392 G E I KN++ G V + S H N L R + I +P+ + +H Sbjct: 338 LEEGAE-EIQPFKNKIPINGKVV-------KIEFSAHGDYNSLVRYIKKIPKPEKAIVMH 389 Query: 393 GEPLHLVAHKELA 405 GE ++ Sbjct: 390 GERYQALSFAMTI 402 >gi|227827653|ref|YP_002829433.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|229584857|ref|YP_002843359.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238619821|ref|YP_002914647.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|227459449|gb|ACP38135.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] gi|228019907|gb|ACP55314.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238380891|gb|ACR41979.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] Length = 638 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPRLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKIEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVVEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSAMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNRGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A Sbjct: 578 HSDRRQLFNFLRTIEPKPKNIILNHGEASAIKAFANYIRD 617 >gi|229579166|ref|YP_002837564.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229582079|ref|YP_002840478.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284997854|ref|YP_003419621.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] gi|228009880|gb|ACP45642.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228012795|gb|ACP48556.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284445749|gb|ADB87251.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] Length = 638 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPRLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKIEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVVEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSAMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNRGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A Sbjct: 578 HSDRRQLFNFLRTIEPKPKNIILNHGEASAIKAFANYIRD 617 >gi|167043327|gb|ABZ08031.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW141N1] Length = 422 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 84/423 (19%), Positives = 148/423 (34%), Gaps = 49/423 (11%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+G + G+ R I++D GV F K DD P + + + K++ Sbjct: 6 LGAASEVGRS----GFLVKCDRTNILLDYGVMFAKRRDD--------PPLYPLHIKPKDV 53 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFA----IGLLEAKRVYERVSKKIPCISFQ 124 A ITHAH DH G + L+ + VYA+P I L+E E+ Sbjct: 54 DAAVITHAHLDHSGCVPSLFIGGNTHVYATPPTHDLSILLIEDMLKIEKNKHSFDYRHVN 113 Query: 125 AG----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + V +G + E H I +++ S + +TGD L +L Sbjct: 114 NMIKNSKEIGFREPVKIGNATFELRASGHVI-GGSTVLVESEGKRLFYTGDINLRGSRML 172 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTF 233 + + I L+ +ST + E + + + KG + + +F Sbjct: 173 PE-------ADLDMGDIDLLITESTYSQTNQIPRQESEKGLIEFANEVMDRKGILFIPSF 225 Query: 234 SSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S V R + I + + +++ G +LK + +K +F + R Sbjct: 226 S--VERSQEIACVLQNANFKHPVIMDGMALKVNDIMFRYPEYLKNINIFSDAINHAFLIR 283 Query: 292 EQLIVIATGSQGEPRSALAQLSRG-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 SQ + A + G M+ + L EK+ + S G Sbjct: 284 NHGDRKKALSQPCVVISPAGMLVGGNAVYYMQELALDEKNGIAMVSYQGEGTPGKKLLET 343 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKEL 404 + +G + SGH + L M + I P+ ++ +HG+ E Sbjct: 344 GIVSARGKDTKVKATVKQFQFSGHADRDSLFDMIKNISGNPK-VLTVHGDDKSCTKFAEE 402 Query: 405 ALQ 407 + Sbjct: 403 IHE 405 >gi|114576018|ref|XP_001154317.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 686 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 58/453 (12%), Positives = 131/453 (28%), Gaps = 66/453 (14%) Query: 12 GGVG-EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITFIMKERKN 67 GG G E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 19 GGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP---------AE 65 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI------- 118 + + I+H H DH GAL + + + I Sbjct: 66 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 125 Query: 119 ----------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + +V H + +I +++TGD+ Sbjct: 126 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSR 184 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV 228 +D L I N L+ +ST E+ + + Sbjct: 185 QEDRHLMA-------AEIPNIKPDILIIESTYGTHIHEKREEREAR-FCNTVHDIVNRGG 236 Query: 229 LVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGII-KKDQLF 280 ++ R + ++ I ++ + SSL + + D++ Sbjct: 237 RGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIR 296 Query: 281 LSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEKDTVIF 330 + + + + + + P + LSR + +++ VI Sbjct: 297 KQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVII 356 Query: 331 SSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVL 388 + + G + + + G ++ + + + S H + ++P + Sbjct: 357 AGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHV 416 Query: 389 VAIHGE-PLHLVAHKELALQEGIACVPPVRNGK 420 + +HGE L + + Sbjct: 417 ILVHGEQNEMARLKAALIREYEDNDEVHIEVHN 449 >gi|322822645|gb|EFZ28636.1| cleavage and polyadenylation specificity factor, putative [Trypanosoma cruzi] Length = 762 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 34 SSDEVEILPIGSGGEVGRSCVILRY----KGRSVMLDCG-NHPAKS--GLDS-LPFFDSI 85 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE-RVSKKI 118 + + ITH H DH GAL V+ + + RV Sbjct: 86 --RCDEIDLVLITHFHLDHCGALPYFCEQTAFKGRVFMTSATKAFYKMVMNDFLRVGASA 143 Query: 119 PCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I ++V V + H + ++ ++TG Sbjct: 144 NDIVTNEWLQSTIEKIETVEYHEEVTVNGIRFQPFNAGH-VLGAALFMVDIAGMKTLYTG 202 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 D+ V D+ L + + L+ +STN Sbjct: 203 DFS--------RVPDRHLLGAEVPSYSPDILIAESTNG 232 >gi|302669218|ref|YP_003832368.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] gi|302396882|gb|ADL35786.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] Length = 727 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 73/399 (18%), Positives = 145/399 (36%), Gaps = 28/399 (7%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + ++ G +IG Y I ID G P+DD +D++ + Sbjct: 2 DNKIRVTVYRGSEQIGGCCTEISY----KDTRIAIDFGSPLPEDDAKELDVI-----GLT 52 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI- 121 K + A+ TH H DH G + + +PVY FA ++ A + Y I Sbjct: 53 KGKSAFDAVLFTHYHGDHVGEIGRI--NSDIPVYMGGFAKDVIAAYKGYNPHFFADVDID 110 Query: 122 ---SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 AG+++ +G+ I + +HS E+ +I++ I+HTGD++L ++ Sbjct: 111 RIDELVAGNEITIGSLRIMPILSDHSAAESFMFLIQADNFQILHTGDFRLHGLYREELLS 170 Query: 179 DKDSLCAIGNEGILALMCDST---NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 L I L+ + T +E+ +++ + + + K C + + S+ Sbjct: 171 SVKKL-----GKIDLLITEGTTLSRKENANKAYTEEVVEEFMRNCVYENKYCFTILS-ST 224 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + R + I D ++ G V + + + L D Sbjct: 225 NFDRFKDISDSVDRYRMDNYPRGKY---FVIDEFQKSLFEIAEKRLPDRYLFRTKTTYGK 281 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 I G + + + + S+ + + + + I K +L E Sbjct: 282 NIDAGMEDKGFIMMIRASKADHEALLRKYLEEYPEKTVLIYSMWSGYMK-KGKLKELTDM 340 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + +H SGH +DL+ + + + ++ IH E Sbjct: 341 ARTKGCLRVIHSSGHVTKHDLESFIEMVESEKVIVIHTE 379 >gi|227830349|ref|YP_002832129.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|227456797|gb|ACP35484.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] Length = 638 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 149/460 (32%), Gaps = 74/460 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ + LGG E+G + L + +++D G++ P ++ G + +FP + Sbjct: 178 QDKYVRITALGGFLEVGRSAVLVE----TPESKVLLDVGLN-PSANMFG-EKLFPRLDID 231 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYE 112 + + L A+ ITHAH DH G + L+ + PVY + ++ + Sbjct: 232 QLKIEELDAVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVVEKEG 291 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 + I+ G+ D+ + H + MA I NIV Sbjct: 292 KPIPYSAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSAMAHLHIGDGKHNIV 351 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDI 220 +TGD+K +L + L+ ++T ++ + I + Sbjct: 352 YTGDFKYAKTKLLDK-------ANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINK 404 Query: 221 MKNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVL 256 N G VL+ + V R + I+ ++ Sbjct: 405 TLNRGGKVLIPVLA--VGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEW 462 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 LG ++ + + + + + E I++AT A+ Sbjct: 463 LGREVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAV-----EF 517 Query: 317 MRNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + K+ +IF S G I +R I + E SG Sbjct: 518 FKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSG 577 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 H L + I +P+ ++ HGE + A Sbjct: 578 HSDRRQLFNFLRTIEPKPKNIILNHGEASAIKAFANYIRD 617 >gi|71654879|ref|XP_816051.1| cleavage and polyadenylation specificity factor [Trypanosoma cruzi strain CL Brener] gi|70881152|gb|EAN94200.1| cleavage and polyadenylation specificity factor, putative [Trypanosoma cruzi] Length = 430 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 34 SSDEVEILPIGSGGEVGRSCVILRY----KGRSVMLDCG-NHPAKS--GLDS-LPFFDSI 85 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE-RVSKKI 118 + + ITH H DH GAL V+ + + RV Sbjct: 86 --RCDEIDLVLITHFHLDHCGALPYFCEQTAFKGRVFMTSATKAFYKMVMNDFLRVGASA 143 Query: 119 PCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I ++V V + H + ++ ++TG Sbjct: 144 NDIVTNEWLQSTIEKIETVEYHEEVTVNGIRFQPFNAGH-VLGAALFMVDIAGMKTLYTG 202 Query: 165 DWKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 D+ V D+ L + + L+ +STN Sbjct: 203 DFS--------RVPDRHLLGAEVPSYSPDILIAESTNG 232 >gi|261402298|ref|YP_003246522.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus vulcanius M7] gi|261369291|gb|ACX72040.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus vulcanius M7] Length = 634 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 71/466 (15%), Positives = 146/466 (31%), Gaps = 57/466 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + + ++IDCG++ + D FP Sbjct: 179 WIRVSFLGGAREVGRSCLYV----QTPDTRVLIDCGINVACE-----DKAFPHFDAPEFS 229 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 ++L A+ ITHAH DH G + L+ + PVY + L+ + + K Sbjct: 230 IEDLDAVIITHAHLDHCGFVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEV 289 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 S + I+ P A + +H G+ + Sbjct: 290 PYSSKDIKTCVKHTIPIDYGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTG 349 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK---GCV 228 + L + L+ +ST + + ++ + ++ G V Sbjct: 350 DIKFETSRLLEPAVCQFPRLETLIIESTYGAYDDVLPEREEAERELLKVVSETTDKGGKV 409 Query: 229 LVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSD 283 L+ F V R + ++ + E+ + I L ++ A + + ++ Sbjct: 410 LIPVFG--VGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKEMRQKI 467 Query: 284 ESFGLYPR------------EQLIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKDT 327 G P E+ VI + + L+ G +++ EK+ Sbjct: 468 FHEGDNPFLSEVFKRVGSTNERRKVIDSDEPCVILATSGMLTGGPSVEYLKHLAPDEKNA 527 Query: 328 VIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHPYPNDLKRMY 380 +IF G + + + + V SGH L + Sbjct: 528 IIFVGYQAEGTLGRKVQRGWKEIPIVTRNGKTKSIPINLQVYTIEGFSGHSDRKQLIKYV 587 Query: 381 QWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ P+ ++ +HGE + + + N +R+ Sbjct: 588 RRLKPSPEKIIMVHGEESKCLDFADTVRRLFKKQTCVPMNLDAVRI 633 >gi|46360445|gb|AAS80153.1| ACT11D09.9 [Cucumis melo] Length = 708 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 146/443 (32%), Gaps = 69/443 (15%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPG-VDLV-FPDITFIMKERK---NLM 69 E+G + + + K IM DCG+ G VD +PD + I R L Sbjct: 44 QEVGKSCVVV----TINGKRIMFDCGM------HLGYVDHRRYPDFSRISASRDYNNTLS 93 Query: 70 AIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV-----SKKIPCIS 122 I ITH H DH GAL + P+Y + + L R + + Sbjct: 94 CIIITHFHLDHIGALPYFTEICGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFT 153 Query: 123 FQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWKLD 169 + ++ + + + +V+TGD+ + Sbjct: 154 NDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMT 213 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGC 227 D LG I + L+ +ST A R+ E+ K +++ + G Sbjct: 214 PDRHLGA-------AQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHN-CLASGGK 265 Query: 228 VLVTTFSSSVSRIRSII-----DIAEQIGRKIVLLGSS-------LKRVVSVAIDVGIIK 275 VL+ TF+ + R + + D E++ K + S+ + + ++ +K Sbjct: 266 VLIPTFA--LGRAQQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVK 323 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKLAEKDTVIFS 331 + + F + +I + +S G + ++ + + Sbjct: 324 ETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLP 383 Query: 332 SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + G V + + + + + + S H + + +++ P+ ++ + Sbjct: 384 GYCVAG-TVGHKLMSGKPTKIDLDKDTQIDVHQLAFSPHTDSKGIMDLVKFLSPKHVILV 442 Query: 392 HGEPLHLVA-----HKELALQEG 409 HGE + H EL + Sbjct: 443 HGEKPKMAVLKERIHSELGIPCH 465 >gi|302348117|ref|YP_003815755.1| Putative exonuclease [Acidilobus saccharovorans 345-15] gi|302328529|gb|ADL18724.1| Putative exonuclease [Acidilobus saccharovorans 345-15] Length = 674 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 76/484 (15%), Positives = 138/484 (28%), Gaps = 70/484 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG GE+G + L +S I++D G + G D +P Sbjct: 195 VRITGLGSFGEVGRSCILI----DTSESKILLDVGFA---QSGFGPDA-YPMFDAPELRL 246 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L A+ I+HAH DH G L+ + P+Y +P + Sbjct: 247 DELDAVVISHAHMDHVGLAPMLYKYGYRGPIYMTPATRDIATLMLQDFINLYIREGKEPP 306 Query: 125 AGDKVDVG------------------AFSIESVRVNHSIPETMALVIRSPV--GNIVHTG 164 K + + H I + + I NI++TG Sbjct: 307 YTQKDLITMLNHTITVNYDVVTDLSPDAKLTFSDAGH-ILGSALVHIHIGQGLYNILYTG 365 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMK 222 D K I L+ +ST +E+ + I K Sbjct: 366 DLKY-YSVRDNKALRLQPPANTEFHRIETLIMESTYGATETPTREEAEQQLMDLINRTYK 424 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG----------------- 258 G VL+ + V R + ++ + + I + G Sbjct: 425 RG-GKVLLPVMA--VGRSQDMMVLLNKAMQEKKIPEMPIYIDGLIYEVTAIYTAYPELLS 481 Query: 259 ---SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSALAQL 312 +G S +Y + I+I+T + G L Sbjct: 482 KEIRDQILNEGANPFIGPQMVFVNDQSKRDEAIYSQGPAIIISTSGMMTGGPILEYFKAL 541 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + + ++ R I E + +++ + +V E A SGH Sbjct: 542 AGDQKNSLVFVSYQAAGTLGRRIVEGEREV-QLEDENRLKTYKVNLEVARIEGF-SGHAN 599 Query: 373 PNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 ++L + + +P+ ++ HGEP L A ++ + I Sbjct: 600 RSELLAFLRRLAPKPRTIILNHGEPAGLSALASTIKGRWDKLGFDASPEVVVPENLETIR 659 Query: 431 IIDE 434 + Sbjct: 660 VYPR 663 >gi|291514122|emb|CBK63332.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Alistipes shahii WAL 8301] Length = 424 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 63/421 (14%), Positives = 129/421 (30%), Gaps = 70/421 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMKERKNLMA 70 G EIG + + + I++D G+ F + + ++ + A Sbjct: 8 GTHEIGGSCVEIR----TPQAKILLDLGLPLDFDSRSQEQQEQI---RREALEWAQEADA 60 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA----- 125 IFI+H H DH+G L D + V +YA+ ++ V Sbjct: 61 IFISHYHADHHGLLPD--THRDVAIYATAGTAAMMHVTEVIHGRGDADYLHHINVLSKEA 118 Query: 126 ----GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + V I V+H+ + A +I + I+++GD + + Sbjct: 119 DDRKFEPIIVDDIRITPYTVDHAAYDACAFLIEAEGRRILYSGDIRRHGVKGFLYH-NLP 177 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTFSSSVSRI 240 + L+ + TN E C+SE I + + + +A + ++ RI Sbjct: 178 R-------KVDCLLLEGTNLATEKECMSEAEICERFKEQFRTDADKLHYIWCSGQNIDRI 230 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT- 299 I + ++ L VA + + + + + + Sbjct: 231 VQIY-------KAALVCSRKLIVDTYVAYVLEAVHRFKSSIPSPLSPFEGHDVFRYFCLP 283 Query: 300 --------GSQGEPRSALAQLSRGEMRNVKLAEKDTV-------------------IFSS 332 E L LS + +++ + + Sbjct: 284 AQLKRLEEAGDPEIVERLKALSTVDTKDIGRNPGKYAWLIRPSMLYYMQKYSHTPSVVVT 343 Query: 333 RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 G E + + E+ +H SGH L+ + + + P +L+ IH Sbjct: 344 SIWEGYEKDEPEFMDWIRER------GFTNPHIHTSGHADAKSLQSIVRHVDPGLLIPIH 397 Query: 393 G 393 Sbjct: 398 T 398 >gi|322502715|emb|CBZ37798.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 756 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 37/216 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 24 DEVEVLPIGSGGEVGRSCVVVRY----KGRGVMLDCG-NHPAKS--GLDS-LPFFDSIK- 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + ITH H DH GAL + ++ + + Sbjct: 75 -CDEIDVVLITHFHLDHCGALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFLRIGAGASD 133 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 S + + ++V V S + H + ++ ++TGD+ Sbjct: 134 LVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGH-VLGAAMFMVDIAGMRALYTGDF 192 Query: 167 KLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 V D+ L + L+ +STN Sbjct: 193 S--------RVPDRHLLGAEVPPYSPDILIAESTNG 220 >gi|157376771|ref|YP_001475371.1| beta-lactamase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319145|gb|ABV38243.1| beta-lactamase domain protein [Shewanella sediminis HAW-EB3] Length = 428 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 75/421 (17%), Positives = 146/421 (34%), Gaps = 55/421 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDL---------VF 55 L G IG + I++D G + DL + Sbjct: 5 SVTILRGADTIGGGCIKINH----REDSIVLDYGAPLMDNTGRTLDADLVANPSIENGIL 60 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE--- 112 DI ++ K +A ++HAH DHYG L L +Y S + ++ ++ Sbjct: 61 LDIQ--QQDTKPPLAYLLSHAHPDHYGLLGSLPKSS--MIYLSDSSYSMMTIGNLFYPEP 116 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 R C F G +G F++++ ++HS +L++ + +TGD++ Sbjct: 117 LRFDSLEQCRQFSPGKPFQIGPFTVKAFLMDHSAFGACSLLVEVDGKQVFYTGDFR--GH 174 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 V+D + ++ + + + +E +++ + VT Sbjct: 175 GRKSRVSDY-IYANVKQPDLMLIEGTTLDGGHSQQFPTEASVEEAMVAAFSERDQPAFVT 233 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S++ RI S+ + ++ G+K+V+ L ++ + +D ++P+ Sbjct: 234 ASGSNIDRIVSLYNATKRTGKKLVI---DLYQLYLLESLKKYSPGLPPHKNDHIKVIFPQ 290 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP---------GNEVAI 342 QL +I + R R+V L + + R P E + Sbjct: 291 SQLAIIKAEFGDD-------FLRHSHRHVNLNKLKDANYVFRISPYAMAPYFDVFIEKGV 343 Query: 343 G-HIK-------NRLVEQGVRVIAEDAECP--VHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 + + + + E VH SGH Y L+ I P+VLV +H Sbjct: 344 KPKLIYSMWLGYQSKQPKFAEMADKCQESWQYVHTSGHAYLEHLQNFSSKIAPKVLVPVH 403 Query: 393 G 393 Sbjct: 404 T 404 >gi|289580988|ref|YP_003479454.1| RNA-metabolising metallo-beta-lactamase [Natrialba magadii ATCC 43099] gi|289530541|gb|ADD04892.1| RNA-metabolising metallo-beta-lactamase [Natrialba magadii ATCC 43099] Length = 432 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 62/280 (22%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV------SFPKDDLPGVDLVFPD 57 EL F+ GG EIG + + +++D G+ +FP D+ Sbjct: 1 MELEFV--GGAREIGRSALVV-------DDTLLVDFGMDSGNPPAFPIGDV--------- 42 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASP----FAIGLLEAKRVYE 112 + A+ ++H H DH G++ L + PV+ +P + L Sbjct: 43 ---------DPEAVVVSHGHLDHVGSIPALLAGDARPPVHWTPPTYDLTMLLARDTLKLH 93 Query: 113 RVSKKIPCIS------------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + P + + + + H IP + ++I + Sbjct: 94 GGTYDCPFTEAELARLTQVSETHGYRETFEAAGYEVTFYDAGH-IPGSAHVLIDDGETRL 152 Query: 161 VHTGDWKL-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 ++TGD+ D + G T ++ ++C+ST + SE + + Sbjct: 153 LYTGDFHTEDQQLLSGTTTRPEA---------DVVVCESTYSETSRRPRSEIE-AEFVES 202 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 + V + ++ R + I+ I EQ + + G Sbjct: 203 VQTTLWEGGTVVVPAFAIGRTQEIMCICEQHDLECYVDGM 242 >gi|16081465|ref|NP_393812.1| hypothetical protein Ta0333 [Thermoplasma acidophilum DSM 1728] gi|10639505|emb|CAC11477.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 407 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 134/417 (32%), Gaps = 57/417 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG E+G G +++D GV P+ Sbjct: 1 MKLKF--LGGAEEVGR----LGVKITDKDTSVIVDYGV-IPEKPPQ-----------YPL 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIP 119 + + A+FITH+H DH GA+ + +YA+ + LL + Sbjct: 43 PPEPVDAMFITHSHLDHIGAVPVYYHKGEPDLYATQMTLNTMKPLLRDALKVTNIEGYPA 102 Query: 120 CISFQ-------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + ++VG H IP + ++ TGD Sbjct: 103 MFNEDDINSALANMRPARYFESIEVGNMVATPYPAGH-IPGSTMWKF-EDGISVTVTGDV 160 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKN 223 D ++ L+ +ST A + S + ++K D + + Sbjct: 161 NTIDTYLINGA---------KPIKTDVLIIESTYAGKNHE--SREDVRKRFRDSVKEVID 209 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 + G V++ F+ V R + +I +G + + G G ++ + FL Sbjct: 210 SGGKVIMPAFA--VGRTQELIMTIADMGYDVAVDGMGNDISTIYLNTPGFLRSKKEFLRA 267 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSR----GEMRNVKLAEKDTVIFSSRAIPGNE 339 S + + + S L G ++ + EK + + + G Sbjct: 268 LSKVRIIKGRNMRENAIRSDIIISTSGMLDGGPVLGYIQKLLEDEKSAIFVTGYQVEGTN 327 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 L GV V + +S H ++L + I P+ +V HG+ Sbjct: 328 GRSLLETGTLTIAGVTVKPKMRVEFFDMSAHAGHDELVNFIKAIDPKKIVLCHGDHR 384 >gi|325116150|emb|CBZ51704.1| hypothetical protein NCLIV_014990 [Neospora caninum Liverpool] Length = 1033 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 98/292 (33%), Gaps = 64/292 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + + Y + +M DCGV P G P + Sbjct: 103 EDWVEITPLGAGCEVGRSCVIVRYKGVT----VMFDCGV-HPAYSGLGA---LPIFDAVD 154 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------AKR----- 109 ++ ITH H DH GAL L + V+ + + + A+ Sbjct: 155 --MTSVDVCLITHFHLDHCGALPYLVTKTAFRGRVFMTEPTRVISKLVWLDYARMSAFSQ 212 Query: 110 ----------------------------VYERVSKKIPCISF-QAGDKVDVGAFSIESVR 140 + V K + +V+VG I Sbjct: 213 APEQANAAASQRASSGQGDKSGAGNYLYDEDDVDKTVQMAECLDFHQQVEVGGVKISCFG 272 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 H + +I +++TGD+ + D + + + + L+C+ST Sbjct: 273 AGH-VLGACMFLIEIGGVRMLYTGDFSREKDRHVP-------IAEVPPVDVQLLICESTY 324 Query: 201 AMREG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + E+ K + DI+ N G L+ F+ + R + ++ I E+ Sbjct: 325 GIHVHDDRQLRERRFLKAVVDIVLNRGGKCLLPVFA--LGRAQELLLILEEY 374 >gi|239617786|ref|YP_002941108.1| beta-lactamase domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506617|gb|ACR80104.1| beta-lactamase domain protein [Kosmotoga olearia TBF 19.5.1] Length = 441 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 82/464 (17%), Positives = 155/464 (33%), Gaps = 77/464 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDITFIM 62 + F+PLGG EIG N L K I+IDCG + + LP +D + Sbjct: 1 MRFVPLGGGKEIGANSYLL----QVDGKNILIDCGRHPIKEGYESLPAIDEI-------- 48 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL-----------LEAKRV 110 L +FI+H+H DH +L L F +V V S L ++ K Sbjct: 49 ---DKLDYVFISHSHYDHLSSLPHLVKFFPNVRVLTSRENKKLSVRILRNSVEVMKKKNE 105 Query: 111 YERVSKKIPCISFQAGDKVDVG-----AFS------IESVRVNHSIPETMALVIRSPVGN 159 + + K +G F + H + ++++ Sbjct: 106 KDGEPILYNHSDVKKAKKRMIGVEYYEPFKISKKLFVTFYPAGH-VMGASSILLEYKGKK 164 Query: 160 IVHTGDWK-LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I +TGD D I A+ + + L+ + T ++E + + + Sbjct: 165 IFYTGDISLSDQLTIP---------SAVLPDKVDVLISEGTYGLKEEATDTRHSEIRRLE 215 Query: 219 -DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS-SLKRVVSVAI 269 I K K V ++ R + ++ + ++ + G S+ + + Sbjct: 216 LSIKKVLKNKGRVLLPVFALGRGQEVLYMILKMLDEEKIPDVPVYTNGMVSIITNLYLQE 275 Query: 270 DVGIIKKDQ-----------LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 G+ + + + L ++ +++ S L+ L E+ Sbjct: 276 YAGMPPEKKKWFNNAILRRVRTVPKNYKTLLYDKRPMILILSSGMLIEDTLSYLFAKEIL 335 Query: 319 NVKLAEKDTVIFSSRAIPGN---EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 L+ + + S G E A + + R+ + SGH + Sbjct: 336 QDNLSAIFFMGYQSPESIGYSILEAARSR-EEEISYGEERIQLRCTVKKFNFSGHASYEE 394 Query: 376 LKRMYQWIRPQVLVAIHG-EPLHLVAHKELALQEGIACVPPVRN 418 L + + ++P LV +HG E L KEL + I+ + Sbjct: 395 LISLPRELQPSKLVYVHGDEEALLNLSKELEYEFDISVPSNLET 438 >gi|295695465|ref|YP_003588703.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] gi|295411067|gb|ADG05559.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] Length = 1001 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 64/476 (13%), Positives = 147/476 (30%), Gaps = 71/476 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG IG + + + W ++D GV D P + + + Sbjct: 1 MRVTFLGGTD-IGASCLWFE---TQTGGW-LVDAGVRMDDRDPL------PSLDRLARAG 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRV-------------- 110 + IF+THAH+DH GAL + S PV+ + + L Sbjct: 50 DRIQGIFVTHAHQDHIGALPLISSLFPDAPVFMTRATLDLARVMLADALKVSREEGKVSV 109 Query: 111 --YERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 ++++ P + + + H + + G+++ TGD+ Sbjct: 110 FTEDQLNDLWPRVRVMGQDKVFGWNGMQVATYSAGHILGAVSIGFVTEAEGSVLVTGDFS 169 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 + + L A++ +ST R +E+ + + + + Sbjct: 170 VTPGRL------LPGLRMPRGSAYDAVITESTYGNRLHGNRAEQE-DRMARQVAEVIERG 222 Query: 228 VLVTTFSSSVSR-------IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 V + +V R ++ + + + +++ ++ V V G + + Sbjct: 223 GFVLIPAFAVGRAQEVLTILQDFMRYNKDYPKFPLVVDGLVRSVCPVYEAHGELLRGPAK 282 Query: 281 LSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRGE-----MRNVKLAEK 325 + G E+ + G ++ L+ G + ++ Sbjct: 283 RMLRTTGSLFDREDIRFVRRPEERREVVEGRPACIVASSGMLNGGPSVFYADKLIQHENN 342 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE---------CPVHVSGHPYPNDL 376 ++ + E + N + + +S H +L Sbjct: 343 AILLCGYQDE---ESPGRRLLNMAEQPESERRWFLPDRVVPVNAKVALYSLSAHADRREL 399 Query: 377 KRMYQWIRPQVLVAIHGEPL-HLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEI 431 + +RP+ ++ +HG+P + EL A + G+ + + P Sbjct: 400 VQTAAQLRPRQVLLVHGDPEAKEMLAAELRAYLPKADIRAAGLGETVEILPGERRH 455 >gi|225387597|ref|ZP_03757361.1| hypothetical protein CLOSTASPAR_01362 [Clostridium asparagiforme DSM 15981] gi|225046309|gb|EEG56555.1| hypothetical protein CLOSTASPAR_01362 [Clostridium asparagiforme DSM 15981] Length = 461 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 24/182 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDIT 59 M+N + LGG GE N L G +++DCGV + G D V+P +T Sbjct: 16 MQNNRIAVTSLGGSGEEARNCFLLEAG----NHAVLLDCGVR---REALGALDHVYPALT 68 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE------ 112 + L A+F++HAHEDH AL L+ VY + I L Sbjct: 69 --REIAGRLTAVFLSHAHEDHVAALPYLYELGYRGNVYGTEETIRLAGGFMKKWVDFVAA 126 Query: 113 ---RVSKKIPCISFQAGDKVDVGAFSIESVRVN----HSIPETMALVIRSPVGNIVHTGD 165 R+ + + A + +G+ +E + V + + L ++++TGD Sbjct: 127 AGGRLPFSVETMKRVAFSAISLGSQVVEGLSVTAGRSGHMLGSCWLRFEYGGKSLLYTGD 186 Query: 166 WK 167 Sbjct: 187 MT 188 >gi|256810384|ref|YP_003127753.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] gi|256793584|gb|ACV24253.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] Length = 428 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 73/426 (17%), Positives = 140/426 (32%), Gaps = 64/426 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + G E+G + + + I++DCGV G ++ +P + + Sbjct: 1 MEIIFRGAALEVGRSC----IEIKTDKSKILLDCGVK------LGKEIEYP---ILDESI 47 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKI------ 118 +++ +F++HAH DH GAL L+ + VP+ + + L++ + Sbjct: 48 RDVDKVFVSHAHLDHSGALPILFHKRIDVPIITTELSKKLIKILLKDMVKIAETESKKIP 107 Query: 119 -----------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDW 166 I +K FS E H IP + ++++ I++TGD Sbjct: 108 YNGHDVKETMRHTIPLSYNEKKYYKDFSYELFSAGH-IPGSASILLNYHDKKTILYTGDI 166 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 KL D + D + I L+ +ST + I I + Sbjct: 167 KLRDTRL-TKGADLS----YTKDDIDVLIIESTYGNSIHPDRKAVEL-SFIEKIKEVLFR 220 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-----------KRVVSVAIDVGIIK 275 + +V R + I+ I + + K +++ AI + Sbjct: 221 GGVTLIPVFAVDRAQEILLILNDYNIDAPIYLDGMAVDVTKLMLNYKHMLNEAIHLEKAL 280 Query: 276 KDQLFLSDESFGLYPREQL-----IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 K+ + + E L IV+ T + L L Sbjct: 281 KNVKIIEKSEDRIRAVENLSKNGGIVVTTAGMLDGGPILYYLKLFMHDPKNALLLTGYQV 340 Query: 331 SSRAIPGNEVAIGHIKN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVL 388 E H+ +L V C + S H ++L + + + P++L Sbjct: 341 R-------ESNGRHLIETGKLFIDKNEVKPNLEICMYNFSCHAGMDELHEVIKKVNPELL 393 Query: 389 VAIHGE 394 + HGE Sbjct: 394 IIQHGE 399 >gi|300856380|ref|YP_003781364.1| putative metal-dependent RNase [Clostridium ljungdahlii DSM 13528] gi|300436495|gb|ADK16262.1| putative metal-dependent RNase [Clostridium ljungdahlii DSM 13528] Length = 825 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 69/487 (14%), Positives = 152/487 (31%), Gaps = 72/487 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E+G + L + + I++DCG+ PD I + Sbjct: 1 MNISFLGGAREVGGSCILLNIYNKN----ILLDCGIRQSSSKDT-----LPDFKSIQDQG 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLE---------AKRVYERVS 115 + I ++HAH DH G+L + +Y + L++ K + Sbjct: 52 G-VDVIIVSHAHMDHIGSLPIISKEYPGARIYTTRMTKDLMKVLLYDSLKIMKNREGEIP 110 Query: 116 KKIPCISFQAGDKVDVGAFSIES---------VRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++V + +E I + I +P G++ ++GD+ Sbjct: 111 LYAEGDVISMLNRVFPINYMVEFSIFENIKLTFYTAGHIAGAACIYITTPEGSLFYSGDF 170 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNA 224 + + + + A + +ST R + E+ + I D Sbjct: 171 SIFSQKTVEGL-------KVPKLRPDAAIFESTYGDRLHSNREVEEEKLIDTIND-CIEK 222 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIKKD 277 KG +L+ F+ + R + ++ I ++ K+ + G + + ++ + + Sbjct: 223 KGKMLIPAFA--LGRAQEVLLIIKKAVNKNILKDTKVYVDG--MIKDINRTYKLNPLYLK 278 Query: 278 QLFLSDESFGLYPREQLIVIATGS---------QGEPR-----SALAQLSRGEMRNVKLA 323 G+ P +IA + EP S + + K+A Sbjct: 279 NSLGKKILRGIEPFYDDNIIAVDNNKLREEVLKDDEPCVIVSSSGMLTGGYSQYYAEKIA 338 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKN--------RLVEQGVRVIAEDAECPVHVSGHPYPND 375 + E + N +L V V +S H + Sbjct: 339 PMENGYIVITGYQDEESPGRKLLNLLDEEKDKKLYINEKTVPVNCKVEKVGLSAHSDKYE 398 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEV 435 +K + ++ P+ + +HG + + ++ V R ++ + + Sbjct: 399 IKSLIDFLTPKNIFLVHGNEEVVENLSKELSKDVRGRVYAPRCSEVYEINIKNPRKQWKK 458 Query: 436 VHGLFLK 442 + Sbjct: 459 NIDKVMN 465 >gi|167043166|gb|ABZ07875.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW141J13] Length = 643 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 77/455 (16%), Positives = 147/455 (32%), Gaps = 82/455 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + E+ L LGG G++G + L + +++DCG++ P +P +P + + Sbjct: 182 QKAEVSLLTLGGFGQVGRSCMLL----TTPDSKVLVDCGIN-PGTRIPR--DAYPRLDWA 234 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 +L A+ I HAH DH G L L + P+Y + + ++ ++ Sbjct: 235 NITLDDLDAVVIGHAHLDHTGFLPVLLKYGYKGPIYCTEPTLPMMNLIQLDAIKVSVAQG 294 Query: 121 ISFQAGDKVDVG------------------AFSIESVRVNHSIPET-MALVIRSPVGNIV 161 + D+ + H + I + N V Sbjct: 295 RTPMYADRDVFQVMRQTITIPYGAVTDISPDIKLVLSNAGHILGSATCHFHIGNGEHNFV 354 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 +TGD K +L T+ + L+ +ST +E + ++ I Sbjct: 355 YTGDIKYGKSMLLESANTNYPR--------VETLLIESTYGAKEDIQPDRQEVESAFIAS 406 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG-------------- 258 + K V +V R + ++ + +Q + + G Sbjct: 407 VNSVIKEGGKVLIPIPAVGRAQELMLVIDQYMKSGGLVEAPVFMEGMIQEATAIHEAFPE 466 Query: 259 ---SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATGSQGEPRSALAQL 312 LK+ + D + ++ + P + I+IAT E L Sbjct: 467 YLVRDLKKKILETDDNPFDSEYFTNITHQDGRDEPLRENSPCIIIATSGMLEGGPVL--- 523 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED---------AEC 363 RNV K+ ++F S + G + + + + E Sbjct: 524 --EYFRNVAPHAKNKILFVSYQVNG--TLGRRVMDGAKQVSILGKEGKIEVISINCSTER 579 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQV--LVAIHGEPL 396 SGH N L +RP++ ++ HGE Sbjct: 580 LDGFSGHSDYNQLMSFVHRLRPKLRRVLVNHGERR 614 >gi|146099573|ref|XP_001468678.1| cleavage and polyadenylation specificity factor [Leishmania infantum] gi|134073046|emb|CAM71766.1| putative cleavage and polyadenylation specificity factor [Leishmania infantum JPCM5] Length = 756 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 37/216 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 24 DEVEVLPIGSGGEVGRSCVVVRY----KGRGVMLDCG-NHPAKS--GLDS-LPFFDSIK- 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + ITH H DH GAL + ++ + + Sbjct: 75 -CDEIDVVLITHFHLDHCGALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFLRIGAGASD 133 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 S + + ++V V S + H + ++ ++TGD+ Sbjct: 134 LVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGH-VLGAAMFMVDIAGMRALYTGDF 192 Query: 167 KLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 V D+ L + L+ +STN Sbjct: 193 S--------RVPDRHLLGAEVPPYSPDILIAESTNG 220 >gi|10639780|emb|CAC11752.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 497 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 107/307 (34%), Gaps = 51/307 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD----LVFPDITF 60 + LGG E+G + L + ++IDCG+ D D L P++ Sbjct: 179 WVRLTALGGHSEVGRSATLV----STKNSKVLIDCGMMNVGPDADPWDAAPYLYVPEVQP 234 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRV 110 + + A+ +THAH DH G L L+ + PVY +P L A+ Sbjct: 235 L----STIDAVILTHAHLDHSGLLPLLFKYGYDGPVYMTPPTRDLAALLQNDYIKVARME 290 Query: 111 YERVSKKIPCISFQAGDKVDV---------GAFSIESVRVNHSIPETMAL-VIRSPVGNI 160 +V + I + + + + H + I + N+ Sbjct: 291 GGKVPYESKYIREELKHTITLRYGETTDITRDMRLTFYNAGHILGSASGHLHIGDGLYNV 350 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V +GD K + + +K M +ST R+ + + + + D+ Sbjct: 351 VLSGDVKFEKTWLFNPANNKFPRAE-------TFMTESTYGGRDDYSFTREEATQTLIDV 403 Query: 221 MKNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGSSLKRVVSVAID 270 + G VL+ F+ V R + ++ + A + G + L G ++ A Sbjct: 404 INRTHDRGGSVLIPVFA--VGRSQEVMIVLEDAMRNGRIPQMDVYLDGMIMEAPAIHAAY 461 Query: 271 VGIIKKD 277 + K+ Sbjct: 462 PEYLNKE 468 >gi|157876175|ref|XP_001686447.1| cleavage and polyadenylation specificity factor [Leishmania major strain Friedlin] gi|68129521|emb|CAJ08064.1| putative cleavage and polyadenylation specificity factor [Leishmania major strain Friedlin] Length = 756 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 74/216 (34%), Gaps = 37/216 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 24 DEVEVLPIGSGGEVGRSCVVVQY----KGRGVMLDCG-NHPAKS--GLDS-LPFFDSIK- 74 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + ITH H DH GAL + V+ + + Sbjct: 75 -CDEIDVVLITHFHLDHCGALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFLRIGAGASD 133 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 S + + ++V V S + H + ++ ++TGD+ Sbjct: 134 LVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGH-VLGAAMFMVDIAGMRALYTGDF 192 Query: 167 KLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 V D+ L + L+ +STN Sbjct: 193 S--------RVPDRHLLGAEVPPYSPDILIAESTNG 220 >gi|325969789|ref|YP_004245981.1| beta-lactamase [Vulcanisaeta moutnovskia 768-28] gi|323708992|gb|ADY02479.1| beta-lactamase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 650 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 78/483 (16%), Positives = 153/483 (31%), Gaps = 82/483 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LG E+G + L + I++DCGV G + Sbjct: 188 KDARITVTGLGAQMEVGRSAILIR----TKESSILLDCGVK---PSSSGDEA----PLLD 236 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-------- 112 + L AI ITHAH DH G + L+ + PVY + L+E Sbjct: 237 ELDLDTLDAIVITHAHMDHIGFVPYLFKYGYKGPVYMTEPTKYLMEVLLTDYIEQAESEG 296 Query: 113 -----------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL-VIRSPVGNI 160 + +++ + H + + I + + NI Sbjct: 297 RVPPYSRQDLAQALYHTITLNYADHPTDISPDTKLMLFDAGHEVGSAVVHLHIGNGLYNI 356 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD K +L +K + L+ +ST +E + ++ + ++ Sbjct: 357 IYTGDMKYGPTRLLNPAHNKFKRAEL-------LIMESTYGGKEDIQPPRQESEQKLVEL 409 Query: 221 MKN---AKGCVLVTTFSSSVSRIRSI-------IDIAEQIGRKIVLLGSSLKRVVSVAID 270 +K+ G VL+ FS+ R + I I+ + I + G L+ + + Sbjct: 410 VKHTVEHDGKVLIPVFST--GRAQEILLVLNEAINNKQLSKVPIYVDGMVLETLNVHLMF 467 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS-ALAQLSRG-------EMRNVKL 322 + + L + + E + I E R + ++ +G + Sbjct: 468 PDYLNRTLRELIYDGVNPFLSEYVKPIERARDPEKRKEQVMEILQGPPAVILAPHGMLNG 527 Query: 323 AEKDTVIFSSRAIPGN---------EVAIGHIKNRLVEQGVRVIAED---------AECP 364 + N E IG + + D + Sbjct: 528 GPIMDYFVHAAEDERNMLLFVSYQAENTIGRRIQQGERKLTVRYYSDRVTLDIKMKVDSI 587 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVAHK---ELALQEGIACVPPVRNG 419 SGH L + + P+ ++ +HGEP ++ EL L+ + Sbjct: 588 PGFSGHSDRRQLFNYVRNMEPKPHKVMLVHGEPAKIMNLALALELQLKMPTVFMNNGETI 647 Query: 420 KML 422 +++ Sbjct: 648 RLV 650 >gi|55377080|ref|YP_134930.1| mRNA 3'-end processing factor-like protein [Haloarcula marismortui ATCC 43049] gi|55229805|gb|AAV45224.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] Length = 638 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 147/452 (32%), Gaps = 78/452 (17%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDI 58 M ++E + LG E+G + + I+IDCG + + P +D+ Sbjct: 176 MSDDEYVRITTLGCCREVGRAAFIL----STPDTRILIDCGNKPGANGEQPYLDI----P 227 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK 117 + A+ +THAH DH + L+ + P+Y + L+ + + Sbjct: 228 EAFGAGTNGIDAVVLTHAHLDHSALVPLLFEYGYDGPIYCTEPTRDLM-GLLTLDHLDTA 286 Query: 118 IPCISFQAGDKVDVG-------------------AFSIESVRVNHSIPETMALVIRSPV- 157 D V + H I + Sbjct: 287 ADDGRTPPYDSEMVREAIKHTIPLEYGDVTDIAPDIKLTLHNAGH-ILGSSVCHFHVGDG 345 Query: 158 -GNIVHTGDWKLDDDAI-LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 N+ +GD DD + G V D + L+ +ST R ++ ++ Sbjct: 346 LYNVAFSGDIHYDDTRLFDGAVNDFPR--------VETLVLESTYGGRNDYQTDQEDSER 397 Query: 216 NIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAID 270 + I++NA G VL+ TF+ V R + ++ + E+ I + L ++ A Sbjct: 398 KLKQIIQNAYDRNGKVLIPTFA--VGRSQELMLVLEEAMRNGDIPEMPVHLDGMIWEATA 455 Query: 271 VGIIKKD------QLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSR 314 V + Q + DE + ++ I G + S L+ Sbjct: 456 VHTTYPEYLRDGLQDRIFDEDKNPFLADRFNPIDGGDEEREEIADGDSCIILSTSGMLTG 515 Query: 315 G----EMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRL----VEQGVRVIAEDA-ECP 364 G + + T+ F G I + + + +V E E Sbjct: 516 GPVMSWLDQLGPDPDSTLTFVDYQAEGTLGKRIQRGIDEVPVSGSGRNEKVPLEMTVETV 575 Query: 365 VHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 576 DGFSGHADRQGLENFVKTMNPRPEKILCVHGD 607 >gi|260815130|ref|XP_002602327.1| hypothetical protein BRAFLDRAFT_282200 [Branchiostoma floridae] gi|229287635|gb|EEN58339.1| hypothetical protein BRAFLDRAFT_282200 [Branchiostoma floridae] Length = 687 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 61/479 (12%), Positives = 140/479 (29%), Gaps = 67/479 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV--FPDIT 59 +++ L PLG E+G + + + K IM+D G+ PG++ + P + Sbjct: 15 ESDLLSIRPLGAGQEVGRSCHMLEF----KGKKIMLDTGI------HPGLNGLNALPFLD 64 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKK 117 I + + + I+H H DH G L + V+ + + + Sbjct: 65 LID--PEEIDLLLISHFHLDHCGGLPYFLTKTSFRGRVFMTHATKAIYKWLLSDYIKVSN 122 Query: 118 IPCISFQA-----------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 I + DV H + +I I Sbjct: 123 ISSEDMLYTENDLSASMDKIETVNFHQETDVNGIKFWCYNAGH-VLGAAMFMIEIAGVKI 181 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK--KNIY 218 ++TGD+ +D L + L+ ++T E+ + ++ Sbjct: 182 LYTGDFSRQEDRHLMA-------AEVPAIHPDVLIIEATYGTHIHEKREEREARFTSTVH 234 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 DI+ C++ ++ R + ++ I ++ + SSL + Sbjct: 235 DIVNRGGRCLI---PVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVYQT 291 Query: 272 GII-KKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNV 320 I +++ + + + + + P + LSR + Sbjct: 292 YINAMNEKIRKQISVSNPFVFKHISNLKGMDHFDDIGPSVVMASPGMMQSGLSRELFESW 351 Query: 321 KLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGVR-VIAEDAECPVHVSGHPYPNDLKR 378 ++ I + + G I + + + + + + S H Sbjct: 352 CTDRRNGCIIAGYCVEGTLAKHIMSEPEEITTMSGQKIPLKCSVDYISFSAHTDYQQTSD 411 Query: 379 MYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVV 436 + ++P +V +HGE + + + + E + Sbjct: 412 FIRQLKPPHVVLVHGEANEMSRLKAAVIREYEDDPDVNIEVHNPKNTQAVELYFRGEKM 470 >gi|150400309|ref|YP_001324076.1| beta-lactamase domain-containing protein [Methanococcus vannielii SB] gi|150013012|gb|ABR55464.1| beta-lactamase domain protein [Methanococcus vannielii SB] Length = 635 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 69/452 (15%), Positives = 139/452 (30%), Gaps = 58/452 (12%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + I++DCG++ DD + FP Sbjct: 177 DSWIRTSFLGGSREVGRTC----IYHQTPESRILVDCGINIAVDD----EKAFPHFDAPE 228 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-RVSKKIPC 120 + A+ +THAH DH G + L+ + PVY + L+ + +S+K Sbjct: 229 FSIDEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVEISEKEGK 288 Query: 121 ISFQAGDKVD--VGAFSIESVRVNHSIPET------MALVIRSPVGNIVHTGDWKLDDDA 172 + + + V I A I + H GD + Sbjct: 289 NVPYSSKDIKNAIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAISHCHVGDGLYNVAY 348 Query: 173 ILGDVTDKDSLCAIGNEG---ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK---G 226 + L + L+ +ST + +K ++M G Sbjct: 349 TGDIKFEASRLLEPATCQFPRLETLIIESTYGGYDDVLPERDETEKEFLNVMLETTSRGG 408 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKR 263 V++ F + R + ++ + E+ + L G +++ Sbjct: 409 KVIIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKAMRN 466 Query: 264 VVSVAIDVGIIKKDQLFLSDES--FGLYPREQLIVIATGSQ----GEPRSALAQLSRGEM 317 + D + + + + + + ++ +I T S G L+ E Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIMDGDEACIILTTSGMLSGGPSVEYFKNLAEDEK 526 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + + R I I + + V+V SGH L Sbjct: 527 NAIVFVGYQSEGTLGRKIQRGFKEIPLMGKNGRSKAVKVNLS-VHTLEGFSGHSDRKQLI 585 Query: 378 RMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + + ++ P ++ +HGE + A + Sbjct: 586 KYLRKLKPIPDRILTVHGEASKCIDLASTAYK 617 >gi|322495148|emb|CBZ30452.1| cleavage and polyadenylation specificity factor,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 756 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 37/216 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 24 DEVEVLPIGSGGEVGRSCVVVRY----KGRGVMLDCG-NHPAKS--GLDS-LPFFDSIKC 75 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + ITH H DH GAL + ++ + + Sbjct: 76 --DEIDVVLITHFHLDHCGALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFLRIGAGASD 133 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 S + + ++V V S + H + ++ ++TGD+ Sbjct: 134 LVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGH-VLGAAMFMVDIAGMRALYTGDF 192 Query: 167 KLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 V D+ L + L+ +STN Sbjct: 193 S--------RVPDRHLLGAEVPPYSPDILIAESTNG 220 >gi|146305000|ref|YP_001192316.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145703250|gb|ABP96392.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348] Length = 642 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 73/476 (15%), Positives = 153/476 (32%), Gaps = 75/476 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LG E+G + L + +++D GV+ + + +FP + Sbjct: 175 KDRYVRVTALGAFQEVGRSAVLVE----TPESRVLMDVGVN---PSVNFGERMFPKLDID 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 ++L A+ +THAH DH G + L+ + PVY + + LL+ Sbjct: 228 QLRLEDLDAVVLTHAHLDHSGMIPFLFKYGYDGPVYTTQPTRDIMALMQLDLLDVADKEG 287 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ + D+ + H I MA I V N+V Sbjct: 288 RPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHIIGSAMAHLHIGDGVHNLV 347 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYD 219 +TGD+K +L + L+ ++T ++ SEK + I Sbjct: 348 YTGDFKYARTRLLDR-------AVSEFPRVDTLIMETTYGAQLQTNRDESEKQLIDVINK 400 Query: 220 -----------IMKNAKGCVLVTTFSSSVSR----------IRSIIDIAEQIGRKIVLLG 258 ++ +G ++ + ++ R ++ LG Sbjct: 401 TLNRGGKVLIPVLAVGRGQEIMLVINDAMKRKLIPEVPVYVTGLFDEVTAIHTAYPEWLG 460 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 ++ + + + + + E I++AT A+ + Sbjct: 461 KEVRDSILFRDENPFTSEFFKRIEGYREDIAEGEPSIILATSGMLNGGPAV-----EFFK 515 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH---------VSG 369 + K+++IF S G +++ E + + SG Sbjct: 516 QLAPDPKNSLIFVSYQAEG--TLGRKVRDGAREIQIIGRDGRVDNIKVNLETTPIDGFSG 573 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 H L + + + +P+ ++ HGE + K+ +R+ + Sbjct: 574 HSDRRQLLKFLEDLTPKPRNIILNHGEASAIREFKKNIENFRERERLGLRSANIYS 629 >gi|110667673|ref|YP_657484.1| mRNA 3'-end processing factor-like protein [Haloquadratum walsbyi DSM 16790] gi|109625420|emb|CAJ51844.1| mRNA 3'-end processing factor homolog [Haloquadratum walsbyi DSM 16790] Length = 639 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 135/447 (30%), Gaps = 72/447 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E + LG E+G + + I+IDCG DD+P + Sbjct: 179 DEWVRISTLGCCREVGR----ASFVLSTPETRILIDCGDKPGSDDVP----YLQAPEALG 230 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYER 113 ++ A+ +THAH DH L L+ + P+Y + L L+ R Sbjct: 231 SGASSVDAVVLTHAHLDHSALLPLLFKYGYDGPIYTTEPTRDLMGLLQLDYLDVAAKEGR 290 Query: 114 VSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV--GNIV 161 I + GD D+ + H I + N+ Sbjct: 291 TPPYDSSMVRETIKHTIPLEYGDVTDIAPDVKLTFHNAGH-ILGSAVTHFHIGDGLYNVA 349 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCI----SEKGIKKN 216 +GD +D + V D + L+ +ST R+ SE+ + + Sbjct: 350 FSGDIHYEDTRLFNGAVNDFPR--------VETLVLESTYGGRDDYQTDQEDSERELIEV 401 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG----RKIVLLGS---------SLKR 263 I + V+ I +++ A + G + L G + Sbjct: 402 INETYDRDGKVVIPAFAVGRSQEIMLVLEEAMRTGEIPQMPVHLDGMIWEATAIHTTYPE 461 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPR-----------EQLIVIATG---SQGEPRSAL 309 + + I D+ E F E IV++T + G S L Sbjct: 462 YLRDNLRDRIFHDDENPFLAEEFNHIDAGEEERQAVSDGEPCIVLSTSGMITGGPIMSWL 521 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + R I I ++L + D SG Sbjct: 522 QHIGTDPDSRLVFVGYQAQGTLGRRIQDGWDEIPINGDQLGRSETLTLEMDVTTVSGFSG 581 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGE 394 H L+ + + RP+ ++ +HG+ Sbjct: 582 HADRQGLENFVKTMNPRPEKILCVHGD 608 >gi|257075969|ref|ZP_05570330.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Ferroplasma acidarmanus fer1] Length = 637 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 76/467 (16%), Positives = 148/467 (31%), Gaps = 87/467 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVD---LVFPDITF 60 + LGG E+G + L ++ +++DCG ++ + P + L P+I Sbjct: 176 WIRITALGGHREVGRSATLI----STNNSKVLVDCGMININDPEHPWEEAPYLYAPEIQP 231 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA---IGLLEA------KRV 110 L A+ +THAH DH G L L+ + PVY++ LL+ Sbjct: 232 FTS----LDAVVLTHAHLDHSGLLPLLFKYGYTGPVYSTAPTRDLAALLQNDYLKVSHSE 287 Query: 111 YERVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPV--GN 159 ++S + + + + + + H I + A+ + N Sbjct: 288 NHKLSYESKHVREELKHTISLKYNETADITPDIRLTFYNAGH-ILGSAAVHLHIGEGLYN 346 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +V +GD K + + + + LM +ST A R+ + + D Sbjct: 347 VVLSGDQKYEKTWLFNPAVN--RFPR-----VETLMLESTYAGRDDYSYTRNEATNTLID 399 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLG---------- 258 ++ G VLV F+ V R + ++ + E K+ L G Sbjct: 400 VVNRTFDRGGSVLVPVFA--VGRSQEVMLVLEDAYRNKMIPENTKVYLDGMIMEATAIHA 457 Query: 259 -------SSLKRVVSVAIDVGIIKKDQLFLSDESFG----LYPREQLIVIATGSQG---- 303 L+ + + + + + P ++I+ G Sbjct: 458 AYPEFLNRDLRDQIMIKRENPFLSPIFTSVETRKQRIDVCDSPESKVILATAGMMNGGPV 517 Query: 304 -EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 E L+ SR + V T+ R G + + + + Sbjct: 518 LEYFKTLSADSRNTLAFVGYQADGTLG--RRIQSG--ASSITLSDGGKSTKFDINMAVEN 573 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVAHKELALQ 407 SGH +L ++P+ ++ HG+ L Sbjct: 574 AEGF-SGHSTKRELLNFIGGMQPRPNRILVNHGDGNKCYDFARLIHT 619 >gi|187736366|ref|YP_001878478.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187426418|gb|ACD05697.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 456 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 75/479 (15%), Positives = 142/479 (29%), Gaps = 82/479 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F + G EIG N L I++D G+ K+ PD + Sbjct: 2 ISFTNISGAEEIGANCYLLE----MDGTRIVLDSGMHPKKEG----KAAMPDFDSLEPNS 53 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVY------------- 111 + A+F++H+H DH G L L V+ +P A L E Sbjct: 54 --VEAVFLSHSHLDHLGTLPVLQEKQPAAEVFMTPAAAALSEVMLHNSVNVMSAKRLDLG 111 Query: 112 ------------ERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVG 158 +R+S S +V H + ++ Sbjct: 112 IVEYPFFTHNDLDRLSDAWHAKSCNEVFRVGFRQNVLATFYDAGHILGSAGVMLEGESGH 171 Query: 159 NIVHTGDWKL-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM---REGTCISEKGIK 214 + +TGD + D I G G+ L+ + T E+ ++ Sbjct: 172 TVFYTGDVQFEDQSMIPG--------ADFPESGVDTLVMECTRGGFQRSAHYSRPEEMVR 223 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVS 266 I + + V ++ + + ++ + + G S K + Sbjct: 224 -FGKAIAETLERGGAVLIPVFAIGKSQEMLFNIHRFKQQGVIPANTPVYFGGLSAKVSLL 282 Query: 267 VAIDVG---------IIKKDQLFLSDESFGLYP----REQLIVIATGSQGEPRSALAQLS 313 G +K++ + G P + V+++G E LS Sbjct: 283 YDRFAGLTRRHDHEFKLKEEIQTVPLPRKGKAPLVCSPGNIYVVSSGMMTE-----NTLS 337 Query: 314 RGEMRNVKLAEKDTVIFSS-----RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 V EK+ ++F + ++ G V + S Sbjct: 338 NVMAEQVLPQEKNAILFVGYADPDSPAGLLKATPEGELVKMRPNGQPVRRKCTVDCFDFS 397 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLV-AHKELALQEGIACVPPVRNGKMLRLFP 426 GH + L + P+ +V +HG+P + H L+ + + + G+ P Sbjct: 398 GHATRDSLVNYAVKLNPRQVVLVHGDPDAVEWMHHTLSAKMPDSTIVVPEPGRRYTFEP 456 >gi|56204956|emb|CAI23178.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 401 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 19/142 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 15 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 66 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG----LLE--AKRVYER 113 L + I+H H DH GAL P+Y + LLE K ++ Sbjct: 67 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 126 Query: 114 VSKKIPCISFQAGDKVDVGAFS 135 + S D + + F Sbjct: 127 KGEANFFTSQMIKDCILLETFW 148 >gi|167395302|ref|XP_001733549.1| Cleavage and polyadenylation specificity factor subunit [Entamoeba dispar SAW760] gi|165894214|gb|EDR22276.1| Cleavage and polyadenylation specificity factor subunit, putative [Entamoeba dispar SAW760] Length = 736 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 77/456 (16%), Positives = 141/456 (30%), Gaps = 60/456 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L PLG E+G + + Y + IM+DCGV P + P Sbjct: 16 INGNYLEIRPLGAGREVGRSCFILKYMGHN----IMLDCGV---HPAKPHGEAALPLFEH 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW--SFLHVPVYASPFAIGLLEAKRVYER----- 113 + ++ + +TH H DH +L L V +P + Sbjct: 69 --ADIDSIELLCVTHYHVDHCASLPYLILERQFKGKVLMTPPTKEIFGELFKEFHQMSST 126 Query: 114 VSKKIPCISFQAGDKVDVGAF---------SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + D++D F I H I I I++TG Sbjct: 127 IQPPKSVNPKEVMDRIDTIKFHELQEYNGMKIWCFNAGH-ILGAAMFCIEINGVKILYTG 185 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + D L + I +MC+ST + E ++ I IM+ Sbjct: 186 DFSGETDRHLQA-------AEVPPFQIDVMMCESTYGIIEQESRIDREN-AFIRQIMEIL 237 Query: 225 KGCVLVTTFSSSVSRIRSI---IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K S+ R + ++ Q + + + S+ S+A + Sbjct: 238 KRGGKCLIPVFSLGRAQEFELILEEYWQNHKDLWSV--SIFFFSSIAKKCTTYFEKFTSF 295 Query: 282 SDESFGLYPRE--QLIVIATGS---------------QGEPRSALAQLSRGEMRNVKLAE 324 ++ ++ I GS P +SR + Sbjct: 296 MNQDLRKKTKQAFDFKFIREGSSSVDDGAIDYKPCVVMASPGMLQDGISRKIFERWCTDK 355 Query: 325 KDTVIFSSRAIPGN---EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ VI + G ++ + K + +G +VI + + + H ++ Sbjct: 356 KNGVIIPGYCVEGTLAKDLILDSTKPFINSEGDQVIPKCSVTEISFCAHSDFAHTRKFIG 415 Query: 382 WIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPV 416 ++P+ LV IHGE H L + + Sbjct: 416 NVKPKHLVLIHGEGKSMEQLHNALKKEYPELNIYMP 451 >gi|313127082|ref|YP_004037352.1| universal archaeal kh-domain/beta-lactamase-domain protein [Halogeometricum borinquense DSM 11551] gi|312293447|gb|ADQ67907.1| universal archaeal KH-domain/beta-lactamase-domain protein [Halogeometricum borinquense DSM 11551] Length = 640 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 148/449 (32%), Gaps = 75/449 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E + LG E+G + + I+IDCG DD+P + + + Sbjct: 179 DEWVRISTLGCCREVGR----ASFILSTPETRILIDCGDKPGSDDVPYLQV----PEALG 230 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYER 113 +L A+ +THAH DH + L+ + P+Y + L L+ R Sbjct: 231 SGANSLDAVILTHAHLDHSALIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDVAAKEGR 290 Query: 114 VSKK---------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIVH 162 CI + GD D+ + H + ++ I + N+ Sbjct: 291 TPPYESEMVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLYNVAF 350 Query: 163 TGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +GD +D + V D + L+ +ST R + ++ + D++ Sbjct: 351 SGDIHYEDTRLFNGAVNDFPR--------VETLVLESTYGGRNDYQTDQADSEEKLIDVI 402 Query: 222 KNAK---GCVLVTTFSSSVSRIRSII---DIAEQIG----RKIVLLGS------------ 259 G VL+ F+ V R + I+ + A + G + L G Sbjct: 403 NETYDRGGKVLIPAFA--VGRSQEIMLVLEEAMRSGKIPSMPVHLDGMIWEATAIHTTYP 460 Query: 260 -----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATGSQGEPRSALAQ 311 L+ + + + + + I+++T ++ Sbjct: 461 EYLRDDLRDRIFHEDENPFLADEFNHIDGGEDERQDVADDGPAIILSTSGMVTGGPIMSW 520 Query: 312 L----SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L + R V + + R G + + ++ + + D E Sbjct: 521 LRHVGPDPKSRLVFVGYQAQGTLGRRIQNGWDEIPVNDRDNVGRSNTLQLKMDVETVDGF 580 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 581 SGHADRAGLENFVKTMNPRPEKVLCVHGD 609 >gi|291238246|ref|XP_002739041.1| PREDICTED: cleavage and polyadenylation specific factor 3-like [Saccoglossus kowalevskii] Length = 573 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 65/500 (13%), Positives = 151/500 (30%), Gaps = 70/500 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ +PLG ++G + L G + IM DCG+ +D + FPD ++I + Sbjct: 3 EIKVVPLGAGQDVGRSCVLVSIGGKN----IMFDCGMHMGYND----ERRFPDFSYITRA 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++L + I+H H DH G+L + P+Y + + R Sbjct: 55 GTLTEHLDCVIISHFHLDHCGSLPHMSEMIGFDGPIYMTIPTKAICPILLEDYRKITVEK 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNIV 161 + + V VN + ++ ++V Sbjct: 115 KGETNFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFHVKVGSQSVV 174 Query: 162 HTGDWKLDDD-AILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +TGD+ + D + D + +G L+ G + + +D Sbjct: 175 YTGDYNMTADRHLGCRERDFLQKVHDCVEKGGKVLIP----VFALGRAQELCILLETFWD 230 Query: 220 ---------------IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 N + +T + + ++ + R I S Sbjct: 231 RMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIR--KTFVQRNMFEFRHIKPFDRSYTDN 288 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 + LS F + + ++ + ++ G+ R ++L Sbjct: 289 PGPMVVFATPGMLHGGLSLHVFKKWASNEKNMVIMPGYCVAGTVGHKILNGQ-RKIELEN 347 Query: 325 KDTV------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + T+ + S + + I + + + V ++ +A+ + ++ Sbjct: 348 RQTIDVKLSVQYMSFSAHADAKGIMQLIKQCEPKNVMLVHGEAKKMDFLK--------QK 399 Query: 379 MYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV-PPVRNGKMLRLFPDPIEIIDEVVH 437 + Q Q + +GE + + H + + + + + + Sbjct: 400 IVQQFGVQCFMPPNGESVVIETHSNIPADISVNLLKRNAALAGFSSTLSTDPKKLCTMHG 459 Query: 438 GLFLKDGFLIGKFADLGIAK 457 L + D + A + + Sbjct: 460 ALVMHDNRITIVEASQALKE 479 >gi|315425373|dbj|BAJ47039.1| mRNA 3'-end processing factor [Candidatus Caldiarchaeum subterraneum] Length = 638 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 143/446 (32%), Gaps = 76/446 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LG ++G + L +S +M+DCG+S +P I Sbjct: 181 DVRITVLGAGRQVGRSCILI----QTSESTVMLDCGLSAGATSSL---SFYPRFDAIPNL 233 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 + L A+ ++HAH DH G + L+ + PVYA + L+ Sbjct: 234 VEELDAVVLSHAHLDHVGLVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFA 293 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE---------------TMALVIRSPVGNIVHTG 164 +F ++ V + P+ + L I + NIV+TG Sbjct: 294 PYGESDIRLALQHSFPLKYGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTG 353 Query: 165 DWKLDD-DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D+K + A+ V+ + L+ +ST E+ I Sbjct: 354 DFKYERSTALDPCVSKFPR--------VETLIMESTYGATPVPYTLEQSEALLAEKITAT 405 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ--IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 V ++ R + I+ + + +K+V L +V A + D Sbjct: 406 INRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAIHTGFPDYFTA 465 Query: 282 SDESFGL------------------------YPREQLIVIATGSQGEPRSALAQLSRGEM 317 + RE ++VI+T E L L Sbjct: 466 ELQQRLREGENIFLSEYFTPVKGESQRQEILEMREPMVVISTSGMLEGGPVLKYL----- 520 Query: 318 RNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + E + ++F S + G V ++N + V + E SGH Sbjct: 521 KAFGGDENNLLLFVSYQVEGTLGRTLLKGVREVLLRNGEGKPEVLNVKMQVEKVDGFSGH 580 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGE 394 L + + +P+ ++ +HGE Sbjct: 581 SSRQQLINYVKRVMPKPRNIILVHGE 606 >gi|315426553|dbj|BAJ48183.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 635 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 143/446 (32%), Gaps = 76/446 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LG ++G + L +S +M+DCG+S +P I Sbjct: 178 DVRITVLGAGRQVGRSCILI----QTSESTVMLDCGLSAGATSSL---SFYPRFDAIPNL 230 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 + L A+ ++HAH DH G + L+ + PVYA + L+ Sbjct: 231 VEELDAVVLSHAHLDHVGLVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFA 290 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE---------------TMALVIRSPVGNIVHTG 164 +F ++ V + P+ + L I + NIV+TG Sbjct: 291 PYGESDIRLALQHSFPLKYGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTG 350 Query: 165 DWKLDD-DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D+K + A+ V+ + L+ +ST E+ I Sbjct: 351 DFKYERSTALDPCVSKFPR--------VETLIMESTYGATPVPYTLEQSEALLAEKITAT 402 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ--IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 V ++ R + I+ + + +K+V L +V A + D Sbjct: 403 INRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAIHTGFPDYFTA 462 Query: 282 SDESFGL------------------------YPREQLIVIATGSQGEPRSALAQLSRGEM 317 + RE ++VI+T E L L Sbjct: 463 ELQQRLREGENIFLSEYFTPVKGESQRQEILEMREPMVVISTSGMLEGGPVLKYL----- 517 Query: 318 RNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + E + ++F S + G V ++N + V + E SGH Sbjct: 518 KAFGGDENNLLLFVSYQVEGTLGRTLLKGVREVLLRNGEGKPEVLNVKMQVEKVDGFSGH 577 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGE 394 L + + +P+ ++ +HGE Sbjct: 578 SSRQQLINYVKRVMPKPRNIILVHGE 603 >gi|315426611|dbj|BAJ48239.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 635 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 143/446 (32%), Gaps = 76/446 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LG ++G + L +S +M+DCG+S +P I Sbjct: 178 DVRITVLGAGRQVGRSCILI----QTSESTVMLDCGLSAGATSSL---SFYPRFDAIPNL 230 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 + L A+ ++HAH DH G + L+ + PVYA + L+ Sbjct: 231 VEELDAVVLSHAHLDHVGLVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFA 290 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE---------------TMALVIRSPVGNIVHTG 164 +F ++ V + P+ + L I + NIV+TG Sbjct: 291 PYGESDIRLALQHSFPLKYGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTG 350 Query: 165 DWKLDD-DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D+K + A+ V+ + L+ +ST E+ I Sbjct: 351 DFKYERSTALDPCVSKFPR--------VETLIMESTYGATPVPYTLEQSEALLAEKITAT 402 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ--IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 V ++ R + I+ + + +K+V L +V A + D Sbjct: 403 INRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAIHTGFPDYFTA 462 Query: 282 SDESFGL------------------------YPREQLIVIATGSQGEPRSALAQLSRGEM 317 + RE ++VI+T E L L Sbjct: 463 ELQQRLREGENIFLSEYFTPVKGESQRQEILEMREPMVVISTSGMLEGGPVLKYL----- 517 Query: 318 RNVKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + E + ++F S + G V ++N + V + E SGH Sbjct: 518 KAFGGDENNLLLFVSYQVEGTLGRTLLKGVREVLLRNGEGKPEVLNVKMQVEKVDGFSGH 577 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGE 394 L + + +P+ ++ +HGE Sbjct: 578 SSRQQLINYVKRVMPKPRNIILVHGE 603 >gi|330842661|ref|XP_003293292.1| hypothetical protein DICPUDRAFT_158104 [Dictyostelium purpureum] gi|325076396|gb|EGC30185.1| hypothetical protein DICPUDRAFT_158104 [Dictyostelium purpureum] Length = 789 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 59/440 (13%), Positives = 130/440 (29%), Gaps = 65/440 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L P+G E+G + L Y K IM DCGV L + P + Sbjct: 28 DDILEITPIGSGNEVGRSCVLLKY----KGKKIMFDCGVHPAYSGL----VSLPFFDSVE 79 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLL--------------- 105 + ++ + ++H H DH A+ V+ + + Sbjct: 80 SDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFSGRVFMTHPTKAIYGMLLADFVKVTTITR 139 Query: 106 -EAKRVYERVSKKIPCISFQ--AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + E+ + KV+ + H + ++ I++ Sbjct: 140 DDDMLFDEKDLNSSLEKIEKVRYRQKVEHNGIKVTCFNAGH-VLGAAMFMVEIAGVKILY 198 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ +D L + L+ +ST ++ E+ K+ + Sbjct: 199 TGDFSRQEDRHLMG-------AETPPVKVDVLIIESTYGVQVHEPRLERE-KRFTTSVHD 250 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVL----------LGSSLKRV 264 ++ R + ++ I ++ G I + + + Sbjct: 251 VVSRGGRCLIPVFALGRAQELLLILDEYWIANPSLHGIPIYYASALAKKCMGVYRTYINM 310 Query: 265 VSVAIDVGI----IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 ++ + + + + + + V P + LSR Sbjct: 311 MNDRVRAQFDVSNPFEFKYISNIKGIESFDDNGPCVF----MASPGMLQSGLSRQLFERW 366 Query: 321 KLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 ++++ V+ ++ G + + V V + V S H Sbjct: 367 CTSKRNGVVIPGYSVEGTLAKHIMSEPTEITRLDNVSVPLNLSVSYVSFSAHSDFLQTSE 426 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 Q I+P +V +HG+ + Sbjct: 427 FIQEIQPPHVVLVHGDANEM 446 >gi|322369848|ref|ZP_08044410.1| hypothetical protein ZOD2009_10175 [Haladaptatus paucihalophilus DX253] gi|320550184|gb|EFW91836.1| hypothetical protein ZOD2009_10175 [Haladaptatus paucihalophilus DX253] Length = 638 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 140/449 (31%), Gaps = 72/449 (16%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M +EE + LG E+G + + I+IDCG DD+P + + Sbjct: 176 MSDEEWVRVTTLGCCREVGR----ASFILSTPETRILIDCGDKPGSDDVPYLQVE----E 227 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERV 114 + + A+ +THAH DH + L+ + P+Y + L+ Sbjct: 228 ALGAGAATIDAVVLTHAHLDHSALIPLLFKYGYDGPIYTTEPTRDLMGLLQLDYLDVAAK 287 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLD 169 ++P + + +E V P+ A I H GD + Sbjct: 288 EGRVPPYESEMVREALKHTIPLEYGDVTDIAPDVKLTFHNAGHILGSAVTHFHIGDGLYN 347 Query: 170 DDAI-LGDVTDKDSL--CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK- 225 TD + L+ +ST R +K ++ + ++ Sbjct: 348 VAFSGDIHYTDTRLFNGAVNDFPRVETLILESTYGGRNDYQTDQKDSEEKLKKVINETYE 407 Query: 226 --GCVLVTTFSSSVSRIRSI---IDIAEQIG----RKIVLLGS----------------- 259 G V++ F+ V R + + I+ A + G + L G Sbjct: 408 KGGKVVIPAFA--VGRSQEMMLVIEEAMRNGDIPEMPVHLDGMIWEATAIHTTYPEYLRD 465 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR---EQLIVIATGSQGEPRSALAQLSRGE 316 L+ + + + + +Q I+++T ++ L Sbjct: 466 DLRDRIFHEDENPFLAPQFNHIDGGEEERQDVADGDQCIILSTSGMVTGGPIMSWL---- 521 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHI--------KNRLVEQGVRVIAE-DAECPVHV 367 +V T++F G I N + + E D E Sbjct: 522 -EHVGPDPDSTMVFVGYQAQG--TLGRRIQSGWDEIPINGRGGRNKTLNLELDVETVDGF 578 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L + + RP+ ++ +HG+ Sbjct: 579 SGHADRAGLMNFVKTMNPRPEKVLCVHGD 607 >gi|269126147|ref|YP_003299517.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311105|gb|ACY97479.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 652 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 134/446 (30%), Gaps = 57/446 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 EL PLGG IG + L G S +++D G+ P D+ Sbjct: 221 ELRVTPLGGDDHIGGSCLLVEAGDTS----LLVDAGIRPGTPPQPPRDVA-------EAL 269 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL--------LEAKRVY-ERV 114 A+ +THAH DH G + L L + + A+P + L L+ R + Sbjct: 270 TARPEAVIVTHAHNDHCGYVPALAHRLPRLRIIATPESCRLMPVMWQDALKVMRRHTAGA 329 Query: 115 SKKIPCISFQAGDKV----------------DVGAFSIESVRVNHSIPETMALVIRSPVG 158 S D V VG ++E H I VI + Sbjct: 330 SSGGSWTPLYEQDAVDVAMERLEELPTGAPRRVGDLTVELFPAGH-ILGAAGAVISAGER 388 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK--N 216 +V TGD D L G G L+ +ST E + + Sbjct: 389 RVVVTGDI----SGFRQASVDGYRLPD-GARGADLLVLESTCCGEEH-GDHRARVGELLG 442 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGII 274 I + + A G VL+ F+ + R + + + + +++ G + + G Sbjct: 443 IVEEVHAAAGRVLIPAFA--LGRAQELALLLREHLPHVPVLIDGMAAEVSAVYETADGPG 500 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKLAEKDTVIFS-- 331 ++ G P L + V+ + Sbjct: 501 ERRLSIFGGNVTAAGHPRDFDGFTKGVVIAPAGMLTGGPAVDWAARILPEPHSAVLLAGY 560 Query: 332 SRAIPGNEVAIGHIKNRLVEQ----GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV 387 G + ++ E V V +S H + L ++ + + + Sbjct: 561 QDDSSGGRRLLQDVREGAAEHLLPGNRPVPLRARVHQVRLSAHADRHGLLQIAKEVSARQ 620 Query: 388 LVAIHGEPLHLVAHKELALQEGIACV 413 + +HG P A +E+ V Sbjct: 621 TMLVHGLPFRQRAFREILHVRHHRTV 646 >gi|254498514|ref|ZP_05111239.1| metallo-beta lactamase family protein [Legionella drancourtii LLAP12] gi|254352265|gb|EET11075.1| metallo-beta lactamase family protein [Legionella drancourtii LLAP12] Length = 452 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 71/450 (15%), Positives = 143/450 (31%), Gaps = 84/450 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG G + + L + K I++DCG+ F +L + + + Sbjct: 1 MKLSF--LGGTGTVTGSKYLLSF----EDKKILVDCGL-FQGYK----ELRLRNWSPLPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + K + A+F+THAH DH G + L H +Y + L ++ + Sbjct: 50 DPKTIDAVFLTHAHIDHSGYIPLLVKNGFHGDIYCTSGTKDLCSILLTDSGHLQEEEART 109 Query: 123 -----------------------------FQAGDKVD--VGAFSIESVRVNHSIPETMAL 151 + D V S++ R H I + + Sbjct: 110 ANKYGYSKHKTALPLYTVNDAEIALKQFKPKPFDTVFQLFDDVSVQFTRAGH-IIGSAFI 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 P +I+ TGD D+++ D + + L+ +ST R K Sbjct: 169 RFNFPNNSILFTGDMGRTHDSVMQ---DPSIIEE-----VDYLVIESTYGNRLHDKEDPK 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + K I + G V++ F+ V+R + ++ + ++ +S+ + Sbjct: 221 VLLKEIINKTVKRGGSVIIPAFA--VARAQLLLYYISLLKKE-----NSIPDIPVYLDSP 273 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIA-TGSQGEPRSALAQLSRGEMRNV---------- 320 I + + ++ + + T + L + Sbjct: 274 MAINASHIMCKHKEDHRLSEQECMDLCNTATYTRTPEESKSLDNNSFPKIIISASGMATG 333 Query: 321 ----------KLAEKDTVIFSSRAIPGNE--VAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 K+T++F+ G + + + + I E ++S Sbjct: 334 GRILFHLKTYAPDPKNTILFAGYQAGGTRGARMVKGEEEVKIHGQMVPIRAQVESLSNLS 393 Query: 369 GHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 H ++ R P+ + HGEP Sbjct: 394 AHADYEEILHWLSHFRKPPKKVFITHGEPE 423 >gi|238020006|ref|ZP_04600432.1| hypothetical protein VEIDISOL_01882 [Veillonella dispar ATCC 17748] gi|237863530|gb|EEP64820.1| hypothetical protein VEIDISOL_01882 [Veillonella dispar ATCC 17748] Length = 391 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 78/393 (19%), Positives = 148/393 (37%), Gaps = 45/393 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--VSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 G +IG + ++ IM+D G +S + P ++L DI + K + + Sbjct: 8 GTHQIGGSA----IEISTASTRIMLDFGNELSLDEKYTP-INL---DIDGVTKGKPDCDG 59 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFA--IGLLEAKRVYERVSKK-IPCISFQAGD 127 I I+H H DH G L S +P+Y + I L+ A+ + + + +F+ GD Sbjct: 60 IVISHYHMDHLGQLTSALSE--IPLYMGELSKEIALIGAEYQDRGLYLRLLGANTFRGGD 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 +G I + ++HS ++ VI + +++TGD++ D L Sbjct: 118 VFSIGDIRIRPLVIDHSATDSYMFVIEAEGKRVLYTGDFRRHGLRHHV----LDKLVNTY 173 Query: 188 NEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + L+ + T+ R+ G ISE + +I +++ K V V S+++ RI I Sbjct: 174 IGEVDVLITEGTSLSRDAGDYISEATVLDDISSYIQDGK-YVFVMCSSTNIDRIMGIWQN 232 Query: 247 AEQIGRKIVLLGS-----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I ++ V + L + + Y E V Sbjct: 233 MPIDKVLICDAYQKRILDTVINNVYYESSLYRRYDSPLVIDKGRYPKYYMEHGFV----- 287 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 +L + + + +K KD V G I+ L + + Sbjct: 288 ------SLVRGTENFISKIKEFPKDDVRIIYSMWTGY------IEENLALKELLDTY--P 333 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 H SGH +DL + + + P +++ +H + Sbjct: 334 SYICHASGHVSKDDLAQFIEMVDPDIVIPVHTD 366 >gi|218532606|ref|YP_002423422.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|218524909|gb|ACK85494.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] Length = 416 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 127/345 (36%), Gaps = 28/345 (8%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQA 125 +L+A+ ++H H DH G L L +PV + +L A + S ++F Sbjct: 55 DLLALVLSHGHRDHVG-LSHLAG-PDLPVAMGTATLRILRAAAAFVPDSYVPTNTVTFTD 112 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G + G F++ + V+HS + AL++ + ++++GD + + L Sbjct: 113 GQALRFGPFTVTPILVDHSAYDAYALLVEAGQQRLLYSGDLRA----HGRKGALFERLVR 168 Query: 186 IGNEGILALMCDSTNAMREGT---CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 GI L+ + ++ R +E I+ + + +G LV + ++ R+ S Sbjct: 169 DPPRGIDTLLLEGSSLGRLDDDRTFPTEADIEDRFIGLFADTEGLALVAASAQNIDRVVS 228 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + ++ GR +VL + + V G + Q S + +++ + TG Sbjct: 229 LYRACKRTGRTLVLDLYAAE----VLAATGNPRIPQSDWPGVSVFVPQHQRVRIKRTGRF 284 Query: 303 GEP-RSALAQLSRGE-------------MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 R ++ + + ++ + +RAI Sbjct: 285 DLIERHGANRIFGEQLGALAPRAALLFRHSLLPDLDRADCLTGARAIWSQWAGYLGQPRG 344 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 H SGH DLKR+ + I P+ LV +H Sbjct: 345 QALVTDLATRAIPLSYAHTSGHASIPDLKRLAEAIAPRQLVPVHT 389 >gi|257053759|ref|YP_003131592.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692522|gb|ACV12859.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 641 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 73/454 (16%), Positives = 147/454 (32%), Gaps = 79/454 (17%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-- 57 M ++E + LG E+G + + ++ID G D PG + +P Sbjct: 176 MSDDEWVRITTLGCCREVGR----ASFILSTPETRVLIDAG------DKPGAEDEYPYLQ 225 Query: 58 -ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEA 107 + ++ A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 226 VPEALGVGASSIDAVVLTHAHLDHSALIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDV 285 Query: 108 KRVYERVSKKIPCISFQ------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPV---- 157 R + + + DV S + H+ + I Sbjct: 286 AAKEGRAPPYDSEMVREAIKHTIPIEYGDVTDISPDIKLTMHNAGHILGSAISHFHIGDG 345 Query: 158 -GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 N+ +GD DD + ++ + L+ +ST R + ++ Sbjct: 346 LYNVAFSGDIHYDDTRLFNGAVNE-------FPRVETLVLESTYGGRNDYQTDQADSEQR 398 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS 266 + +I++ G VL+ F+ V R + ++ + E+ + L G + Sbjct: 399 LKEIIRETYERDGSVLIPAFA--VGRSQELMLVLEEAMREGDIPEMPVHLDGMMWEATAI 456 Query: 267 VAIDVGIIKKD-QLFLSDESFGLYPREQLIVIATG-------SQGEPRSALAQ------- 311 ++ D + + + + +Q I G + GEP L+ Sbjct: 457 HTTYPEYLRDDLRDRIFHDDENPFLADQFNHIDGGEEERQEVTDGEPAIVLSTSGMVTGG 516 Query: 312 --LSRGEMRNVKLAEKDTVI-------FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 +S E T + R G + + N + + E Sbjct: 517 PIMSWLEHFGSDPDSTLTFVGYQAQGTLGRRIQNGWDEIPMNNGNGRGRGNTLSLEMNVE 576 Query: 363 CPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 SGH L+ + + RP+ ++ +HG+ Sbjct: 577 TVDGFSGHADRQGLENFVKTMNPRPEKVLCVHGD 610 >gi|154336691|ref|XP_001564581.1| cleavage and polyadenylation specificity factor [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061616|emb|CAM38647.1| putative cleavage and polyadenylation specificity factor [Leishmania braziliensis MHOM/BR/75/M2904] Length = 756 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 37/217 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +E+ LP+G GE+G + + Y + +M+DCG + P G+D P I Sbjct: 23 QDEVEVLPIGSGGEVGRSCVVVHY----KGRGVMLDCG-NHPAKS--GLDS-LPFFDSIK 74 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + ITH H DH GAL + V+ + + Sbjct: 75 --CDEIDVVLITHFHLDHCGALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFLRIGAGAS 132 Query: 111 -----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 S + + ++V V S + H + ++ ++TGD Sbjct: 133 DLVTSEWLQSTIDRIETIEYHEEVTVNGISFQPFNAGH-VLGAAMFMVDIAGMRALYTGD 191 Query: 166 WKLDDDAILGDVTDKDSL-CAIGNEGILALMCDSTNA 201 + V D+ L + L+ +STN Sbjct: 192 FS--------RVPDRHLLGAEVPPYSPDILIAESTNG 220 >gi|170291024|ref|YP_001737840.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175104|gb|ACB08157.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 624 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 78/467 (16%), Positives = 150/467 (32%), Gaps = 76/467 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD-LPGVDLVFPDITFIMKERKNLM 69 LG E+G + L + +++DCG+S P +DL+ DI L Sbjct: 180 LGAAREVGRSSVLI----TTDESNVLLDCGISLSSRSAFPRLDLI--DI-------DELD 226 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK----------- 117 A+ ITHAH DH GAL L+ + PVY + L+ + Sbjct: 227 AVIITHAHLDHSGALPLLFKYGYRGPVYLTRPTRDLMMLLLYDYINLSQRVGSIPFFSWR 286 Query: 118 ------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKLD 169 I+ + VD+ + H + +A I S N+++TGD++ Sbjct: 287 DVVNMMNHTITLDYTETVDISPDIKLTFYNAGHILGSALAHLNIESARHNVLYTGDFRFR 346 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 D +L + L+ + T S ++ ++ ++K G Sbjct: 347 DTKLLDKA--VRKFPR-----VETLIMECTYGGESDVLPSLPEAEEALFSVIKGTAERGG 399 Query: 227 CVLVTTFSSSVSRIRSI-------IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK--- 276 VL+ + V R + I + + L G + + Sbjct: 400 KVLIPALA--VGRAQEIMLSLVDGFERGLLPDIPVYLDGMIYDSTAIHSAYPDYLSNYVR 457 Query: 277 ------DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKD 326 D+ ++ F ++ + G + L+ G + + E++ Sbjct: 458 ESVFKRDRDPFTEPHFNFVSSDERPDVTKGGPAVIIAPSGMLTGGPSVDYLKLLAPGEEN 517 Query: 327 TVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +++ S G +++ ++V A+ S H L Sbjct: 518 SIVLVSYQAEGTLGRRLRDGARELRLQDEEGYITIKVKADVRVIEGF-SAHADKVQLLSY 576 Query: 380 YQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + RP + +HGE + LA + + G+ +L Sbjct: 577 LSTMEPRPHRVFLVHGEEEKMREFGPLASKSASIRTVSPQIGETFKL 623 >gi|2129074|pir||G64305 hypothetical protein YLR277c homolog - Methanococcus jannaschii Length = 435 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 71/431 (16%), Positives = 141/431 (32%), Gaps = 62/431 (14%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M + + G E+G + + + I++DCGV G ++ +P Sbjct: 1 MNKNGGIMEIIFRGAALEVGRSC----IEIKTDKSKILLDCGVK------LGKEIEYP-- 48 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRV------- 110 + +++ +FI+HAH DH GAL L+ + VPV + + L++ Sbjct: 49 -ILDNSIRDVDKVFISHAHLDHSGALPVLFHRKMDVPVITTELSKKLIKVLLKDMVKIAE 107 Query: 111 -YERVSKKIPC---------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN- 159 + I DK FS E H IP + ++++ Sbjct: 108 TENKKIPYNNHDVKEAIRHTIPLNYNDKKYYKDFSYELFSAGH-IPGSASILLNYQNNKT 166 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD KL D + D + I L+ +ST + I Sbjct: 167 ILYTGDVKLRDTRL-TKGADLS----YTKDDIDILIIESTYGNSIHPDRKAVEL-SFIEK 220 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-KRVVSVAIDVGIIKKDQ 278 I + + +V R + I+ I + + V + ++ + + Sbjct: 221 IKEILFRGGVALIPVFAVDRAQEILLILNDYNIDAPIYLDGMAVEVTKLMLNYKHMLNES 280 Query: 279 LFLSDESFGLYPREQL---------------IVIATGSQGEPRSALAQLSRGEMRNVKLA 323 L + E+ IV+ T + L L Sbjct: 281 SQLEKALKNVKIIEKSEDRIKAIENLSKNGGIVVTTAGMLDGGPILYYLKLFMH-----N 335 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 K+ ++ + + + ++ + C + S H ++L + + + Sbjct: 336 PKNALLLTGYQVRDSNGRHLIETGKIFIGKDEIKPNLEVCMYNFSCHAGMDELHEIIKKV 395 Query: 384 RPQVLVAIHGE 394 P++L+ HGE Sbjct: 396 NPELLIIQHGE 406 >gi|325284382|ref|YP_004256922.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324316446|gb|ADY27559.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 526 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 75/499 (15%), Positives = 144/499 (28%), Gaps = 72/499 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + F LGG E+G + LY + + ++ID G+ + G D P + + Sbjct: 1 MDFSFTGLGGTDEVGASSYLYHF----TEGRLLIDAGLR---PGMIG-DAALPQLDVL-- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRV------------ 110 A+ +THAH DH AL + + +Y +P L Sbjct: 51 NDAPPGAVILTHAHLDHVSALPVVLRRYPKLHIYCTPATAHLAALTLADSLRIMEAQGQM 110 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + ++ F+ H + +++I S G + HTGD Sbjct: 111 LYSPEDMKRTFEAFRPVEYFQRIADHGFAFTLYPSGH-LLGAASVLIESSAGTVFHTGDV 169 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 ++ + A++ ++T + ++ ++ + + +G Sbjct: 170 SNVSTPVVDAAWMPPRKTHA----VDAVVSEATYGDTLLP-ARKIQVQAFMHGVAQVVEG 224 Query: 227 CVLVTTFSSSVSRIRSIIDIAE---QIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 V S ++ R + I+ + G ++ L + R V+ A + L Sbjct: 225 GGRVLIPSFALGRAQEIVQLLHGGMVSGIIPEVPLYLDGMVRTVTEA-----YQDMLPLL 279 Query: 282 SDESFGLYPREQLIVIATGSQGEPRS--ALAQLSRGEMRNVKLAEKDTVIFSSRAI---- 335 Q TG+ +S ++ R + V +A + + Sbjct: 280 PQALRNRVKTSQQPAFFTGTVEAVQSAKDRERIQRSDKPAVVIASSGMLHAGASPSYARA 339 Query: 336 ----PGN----------EVAIGHIKNRLVEQGV---------RVIAEDAECPVHVSGHPY 372 GN E + V V A ++S H Sbjct: 340 WLPDSGNALFVVGYQDGESPGRRLLELQQGGEVLLPDQNGFSAVSAYARIERFYLSAHSD 399 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEII 432 L M P+ ++ HGE A +A + +E I Sbjct: 400 QGGLLSMIARYDPKKVLLTHGEAAPRRALAGFLKTRDVALPAAGEMVSLRAQPKRKVEFI 459 Query: 433 DEVVHGLFLKDGFLIGKFA 451 K K Sbjct: 460 PPATPQQPRKQRHRRVKVD 478 >gi|156936804|ref|YP_001434600.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156565788|gb|ABU81193.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 652 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 77/492 (15%), Positives = 148/492 (30%), Gaps = 93/492 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----PKDDLPGVDLVFPD 57 K + LG E+G + L + +++D G + P+ P V+ V Sbjct: 178 KTNYVRITALGAFKEVGRSAILLE----TKESKVLLDFGANVGSYDPQKHFPKVEEV--- 230 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAK 108 L A+ +THAH DH G + L+ + PVY + L +E Sbjct: 231 ------PIDELDAVIVTHAHLDHCGLVPWLYKYGYRGPVYVTQPTRDLMYLVQKDYIEVA 284 Query: 109 RVYERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV- 157 R + I+ G+ DV + H I + + Sbjct: 285 RKEGKPVPYTESDINSMLLRTIALNYGEVTDVAPDIKLTFYNAGH-ILGSAMAHLHVGEG 343 Query: 158 -GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIK 214 N+V+TGD+K +L + A++ +ST ++E+ + Sbjct: 344 LFNLVYTGDFKYGYTRLLDK-------ANTQFPRVEAVIMESTYGTQDLPPRELAERLLI 396 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIR-----------------------------SIID 245 I ++ G VL+ + V R + + + Sbjct: 397 DIINKTIEKG-GFVLIPVLA--VGRAQEILLLLVDAVQNKLIKSPEGGAVPIYLDGMVYE 453 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 L S+K + + + S G RE+++ G Sbjct: 454 ATAIHAAYPEWLAKSVKERIIKGENPFLADFVHKVESVSIEGGISREEVLESEPGVILAT 513 Query: 306 RSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGN----------EVAIGHIKNRLVEQGV 354 L E R + K++++F + G V I ++ + Sbjct: 514 SGMLTGGPSLEYFRKLAPDPKNSIVFVAYQAAGTLGRTLKEGADRVEIAINEDGKSKLYQ 573 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIAC 412 + SGH ++L + + RP+ ++ HGEP + + + Sbjct: 574 LEVRSHVFSVEGFSGHSSRSELINWVKSVTPRPKNIILNHGEPSRIEGLARVLSRTVARG 633 Query: 413 VPPVRNGKMLRL 424 + + Sbjct: 634 MKIYTPNIRDSI 645 >gi|257075851|ref|ZP_05570212.1| mRNA 3'-end processing factor [Ferroplasma acidarmanus fer1] Length = 409 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 77/415 (18%), Positives = 145/415 (34%), Gaps = 58/415 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 + LGG E+G + IMID G+ P+ LP Sbjct: 1 MKIKFLGGAEEVGR----LAIKIEDKQSKIMIDYGIEPEKPPEYPLP------------- 43 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKI 118 + + IF+THAH DH GAL + +A+ +L R+ Sbjct: 44 --PEKVNDIFLTHAHLDHTGALPVYYHNFQANFHATAMTANSIKPILMDSLKIMRLENYT 101 Query: 119 PCISFQAGDKVDV--------GAFSIE-SVRVNHS---IPETMALVIRSPVGNIVHTGDW 166 + + D + F ++ V HS IP + + + + TGD Sbjct: 102 KMFNEEDVDNLFKSMMTAKYEQPFQVDNLTAVAHSAGHIPGSTMWWFQ-DARSFMITGDL 160 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMKNA 224 D + L L+ +ST A R+ E + +K++I + ++N Sbjct: 161 ---------YTRDTNLLYGAKPVKTDVLIMESTYAGRDHEDRDEVIQRLKESIRETIENG 211 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 G V++ TF+ + R + +I + +I + G + G IK +LF Sbjct: 212 -GRVILPTFA--IGRTQEMIMTLRDMDYRIYVDGMGNRISGIYMDTPGFIKDPKLFRRSM 268 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGH 344 + R + + + + + G + S+ + G +V + Sbjct: 269 GRVIQVRNNRMRQEAIREADIIITTSGMLDGGPVLGYIDAFAEDPKSAIFLTGYQVDGTN 328 Query: 345 ----IKNRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 I+N ++ I + +S H +DL + + + P+++V HG+ Sbjct: 329 GRSLIENGTIQIAGATIKPAMKIDFFDLSAHAGHSDLVKFVKGVDPEIVVLCHGD 383 >gi|134045919|ref|YP_001097405.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132663544|gb|ABO35190.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 635 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 68/442 (15%), Positives = 136/442 (30%), Gaps = 64/442 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + I++DCG++ DD + FP Sbjct: 177 DSWIRTSFLGGSREVGRTCL----YHQTPESRILVDCGINIAVDD----EKAFPHFDAPE 228 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-RVSKKIPC 120 + + A+ +THAH DH G + L+ + PVY + L+ + +++K Sbjct: 229 FSIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGK 288 Query: 121 ISFQAGDKV--DVGAFSIESVRVNHSIPET------MALVIRSPVGNIVHTGDWKLDDDA 172 + + + V I A I H G+ + Sbjct: 289 NVPYSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGEGLYNVAY 348 Query: 173 ILGDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 + L + L+ +ST + +K ++ KG Sbjct: 349 TGDIKFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKR 263 V++ F + R + ++ + E+ + L G +++ Sbjct: 409 KVIIPVFG--IGRAQELMLVLEEGYNQGMFNAPVYLDGMIWEATAIHTAYPEYLSKNMRN 466 Query: 264 VVSVAIDVGII---------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + D + D+ + D +++ G E LA + Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIIDSDEPSIILTTSGMLSGGPSVEYFKNLADNEK 526 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V + T+ R I I + + V+V SGH Sbjct: 527 NAIVFVGYQSEGTLG---RKIQKGFKEIPLMGKNGRSKAVKVNLS-VHTLEGFSGHSDRK 582 Query: 375 DLKRMYQWIR--PQVLVAIHGE 394 L + + ++ P ++ +HGE Sbjct: 583 QLIKYLRKLKPIPDRILTVHGE 604 >gi|289192183|ref|YP_003458124.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp. FS406-22] gi|288938633|gb|ADC69388.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp. FS406-22] Length = 634 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 69/466 (14%), Positives = 146/466 (31%), Gaps = 57/466 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + + ++IDCG++ + D FP Sbjct: 179 WIRVSFLGGAREVGRSCLYV----QTPDTRVLIDCGINVACE-----DKAFPHFDAPEFS 229 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 ++L A+ +THAH DH G + L+ + PVY + L+ + + K Sbjct: 230 IEDLDAVIVTHAHLDHCGFVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEV 289 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + I+ P A + +H G+ + Sbjct: 290 PYTSKDIKTCVKHTIPIDYGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTG 349 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK---GCV 228 + L + L+ +ST + + ++ + ++ G V Sbjct: 350 DIKFETSRLLEPAVCQFPRLETLIIESTYGAYDDVLPEREEAERELLRVVSETTDKGGKV 409 Query: 229 LVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSD 283 L+ F V R + ++ + E+ + I L ++ A + + ++ Sbjct: 410 LIPVFG--VGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKEMRQKI 467 Query: 284 ESFGLYPR------------EQLIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKDT 327 G P E+ VI + + L+ G +++ EK+ Sbjct: 468 FHEGDNPFLSEVFKRVGSTNERRRVIDSDEPCVILATSGMLTGGPSVEYLKHLAPDEKNA 527 Query: 328 VIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHPYPNDLKRMY 380 +IF G + + + + V SGH L + Sbjct: 528 IIFVGYQAEGTLGRKVQRGWKEIPITTRNGKTKSIPINLQVYTIEGFSGHSDRKQLIKYI 587 Query: 381 QWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ P+ ++ +HGE + + + N +R+ Sbjct: 588 RRLKPSPEKIIMVHGEESKCLDFADTVRRLFKKQTYVPMNLDAIRV 633 >gi|312135668|ref|YP_004003006.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] gi|311775719|gb|ADQ05206.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] Length = 821 Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 98/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L G + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKN----ILIDSGIRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + H+ Y + L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPHIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ V I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPVEGIRVTFFPAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNA 224 D + ++ ++C+ST R T S E+ + I++++ Sbjct: 169 SADKQLTVDR-------ASVPKIRPDIVICESTYGDRLHTNRSFEEERLFNTIFEVISQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + +I I Sbjct: 222 -GKVLIPAFA--IGRAQEVILILRNY 244 >gi|269986876|gb|EEZ93153.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 629 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 89/447 (19%), Positives = 155/447 (34%), Gaps = 80/447 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIM 62 + LG +G + L S I++D GV S PK+ +P VD DI+ Sbjct: 175 WVRISALGAFRHVGRSAVLVQTPISS----ILLDAGVDVSNPKEPVPRVDAPEFDIS--- 227 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------------EA 107 L A+ ITH+H DH G L L+ + + PVY++ ++ + Sbjct: 228 ----KLAAVVITHSHLDHCGFLPALYKYGYNGPVYSTAPTRDVMTLLHLDYINLASRTNS 283 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH---SIPETMALV--IRSPVGNIVH 162 K +++ K +V + + H I + + I + N+++ Sbjct: 284 KLLFDVDDVKKMLKHSITLPFHEVTDITPDIRITLHNAGHILGSAMIHLNIGNGFYNVLY 343 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+K D+ L E + L+ +ST T S ++ DI+ Sbjct: 344 TGDFKYDNSKTLNR-------AETQFERVETLIMESTYGGESDTQPSRTETEQFFLDIIS 396 Query: 223 NA---KGCVLVTTFSSSVSRIRS---IIDIAEQIGR----KIVLLGSSLKRVVSVAIDVG 272 G VL+ V R + +I+ ++ G +V+ G L V ++ Sbjct: 397 KTIANNGKVLIPVLG--VGRAQELMLLIEEWQRYGLLPEAPVVVDGM-LWDVTAIYTVYP 453 Query: 273 IIKKDQLFLSDESFGLYPR-----------EQLIVIATGSQGEPRSALAQLSRG----EM 317 + + P E+ + +GS + L+ G Sbjct: 454 EFMNSETRNRIIAHNNNPFLSPIFKHTVSEEERQQVLSGSPVIILATSGMLNGGPAVSYF 513 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH--------VSG 369 N+ K+ V+ S G I+N E + + + V SG Sbjct: 514 ANLCEDPKNAVVLVSYQGIG--TLGRTIQNGGREVDIELNGKLRHFSVSALVYSIEGFSG 571 Query: 370 HPYPNDLKRMYQWIRPQ--VLVAIHGE 394 H L+R IRP+ ++ HGE Sbjct: 572 HSDRKQLERFVNDIRPKPRKIIIGHGE 598 >gi|14165488|gb|AAH08041.1| CPSF3L protein [Homo sapiens] gi|18044933|gb|AAH20199.1| CPSF3L protein [Homo sapiens] Length = 389 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 19/142 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG----LLE--AKRVYER 113 L + I+H H DH GAL P+Y + LLE K ++ Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDK 114 Query: 114 VSKKIPCISFQAGDKVDVGAFS 135 + S D + + F Sbjct: 115 KGEANFFTSQMIKDCILLETFW 136 >gi|296418744|ref|XP_002838985.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634979|emb|CAZ83176.1| unnamed protein product [Tuber melanosporum] Length = 783 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 92/270 (34%), Gaps = 41/270 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +++ L FL LGG E+G + + Y K +M+D GV + L G P Sbjct: 18 ESDHLTFLCLGGGNEVGRSCHILKY----KGKTVMLDAGVHPAYEGLAG----LPFYDQF 69 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVY-------- 111 + + I+H H DH +L + + V+ + + + Sbjct: 70 D--LSTVDVLLISHFHLDHAASLPYVMTKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNVH 127 Query: 112 ----------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + +S + + SI H + I I+ Sbjct: 128 NSPDNLYTESDHLSSYSRIEAIDYHTTLTHAGISITPYHAGH-VLGGAMFFIEIAGLKIL 186 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDI 220 TGD+ +DD L + ++ L+C+ST EK + + Sbjct: 187 FTGDYSREDDRHLVS-------AEVPHQKPDLLICESTYGTATHMPRLEKEARLMKMTTE 239 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + N G VL+ F+ + R + ++ I ++ Sbjct: 240 ILNRGGRVLMPVFA--LGRAQELLLILDEY 267 >gi|297545551|ref|YP_003677853.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843326|gb|ADH61842.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 829 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 72/492 (14%), Positives = 152/492 (30%), Gaps = 77/492 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + L K I++DCG+ PD I + + AI Sbjct: 7 GGANEVGASCYLI----NLDGKNILLDCGIRMSSTKDN-----LPDFRLIQEHGG-VDAI 56 Query: 72 FITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL--------LEAKRVYERVSKKIPCIS 122 ++HAH DH GAL + +Y + L L+ + Sbjct: 57 IVSHAHLDHTGALPIISRMYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHV 116 Query: 123 FQAGDKV-------DVGAFSIESVRVN----HSIPETMALVIRSPVGNIVHTGDWKLDDD 171 D+V F ++V I ++ I S G+I ++GD+ Sbjct: 117 KDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSIFYSGDFSGFRQ 176 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGCVL 229 + I + +ST + + E + + + I+ G V+ Sbjct: 177 NTIEGAF-------IPKLRPDVAIFESTYGDKLHANRELEETRLIEKVSSIINEG-GKVI 228 Query: 230 VTTFSSSVSRIRSIIDIAEQI-------------------GRKIVLLGSSLKRVVSVAID 270 + F+ + R + II I ++ R L + L++ ++ I Sbjct: 229 IPAFA--LGRAQEIILILKKAINKGLLKTKVYVDGMVREVCRVYKLNPNYLRQNLAKKIF 286 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--KLAEKDTV 328 G + + E + S+ ++ G + KLA+ + Sbjct: 287 KGNDIFFDDNVIEVEKPEMREEIIKESCV-----ILSSSGMITGGPSQWYVEKLAQDEKN 341 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV---------SGHPYPNDLKRM 379 + + E + + + E + + + + S H ++ + Sbjct: 342 LIAITGYQDEESPGRRLLDIMEESPENRKIKIDDKEILINASIDKFGLSAHADMGEILAL 401 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGL 439 + P+ + +HG+P + + ++ + V NG + + E Sbjct: 402 ANSLYPKKIFLVHGDPEIINFLGKEVQKDLKSEVYIPSNGDIYEIDIKNPRKQIEKQPYP 461 Query: 440 FLKDGFLIGKFA 451 + + + Sbjct: 462 SMNQNCALTQEN 473 >gi|15668217|ref|NP_247010.1| putative mRNA 3'-end processing factor 1 [Methanocaldococcus jannaschii DSM 2661] gi|3915921|sp|Q60355|Y047_METJA RecName: Full=Uncharacterized protein MJ0047 gi|2826239|gb|AAB98027.1| putative mRNA 3'-end processing factor 1 [Methanocaldococcus jannaschii DSM 2661] Length = 428 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 70/424 (16%), Positives = 140/424 (33%), Gaps = 60/424 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + G E+G + + + I++DCGV G ++ +P + Sbjct: 1 MEIIFRGAALEVGRSC----IEIKTDKSKILLDCGVK------LGKEIEYP---ILDNSI 47 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRV--------YERVSK 116 +++ +FI+HAH DH GAL L+ + VPV + + L++ + Sbjct: 48 RDVDKVFISHAHLDHSGALPVLFHRKMDVPVITTELSKKLIKVLLKDMVKIAETENKKIP 107 Query: 117 KIPC---------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDW 166 I DK FS E H IP + ++++ I++TGD Sbjct: 108 YNNHDVKEAIRHTIPLNYNDKKYYKDFSYELFSAGH-IPGSASILLNYQNNKTILYTGDV 166 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 KL D + D + I L+ +ST + I I + Sbjct: 167 KLRDTRL-TKGADLS----YTKDDIDILIIESTYGNSIHPDRKAVEL-SFIEKIKEILFR 220 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-KRVVSVAIDVGIIKKDQLFLSDES 285 + +V R + I+ I + + V + ++ + + L Sbjct: 221 GGVALIPVFAVDRAQEILLILNDYNIDAPIYLDGMAVEVTKLMLNYKHMLNESSQLEKAL 280 Query: 286 FGLYPREQL---------------IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + E+ IV+ T + L L K+ ++ Sbjct: 281 KNVKIIEKSEDRIKAIENLSKNGGIVVTTAGMLDGGPILYYLKLFMH-----NPKNALLL 335 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + + + ++ + C + S H ++L + + + P++L+ Sbjct: 336 TGYQVRDSNGRHLIETGKIFIGKDEIKPNLEVCMYNFSCHAGMDELHEIIKKVNPELLII 395 Query: 391 IHGE 394 HGE Sbjct: 396 QHGE 399 >gi|55378101|ref|YP_135951.1| mRNA 3'-end processing factor-like protein [Haloarcula marismortui ATCC 43049] gi|55230826|gb|AAV46245.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] Length = 640 Score = 103 bits (258), Expect = 7e-20, Method: Composition-based stats. Identities = 72/481 (14%), Positives = 143/481 (29%), Gaps = 82/481 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD---IT 59 + + LG E+G + + I+IDCG D PG + P Sbjct: 179 EDWVRLTTLGCCREVGRAAFIL----STPESRILIDCG------DKPGAEGEVPYLQAPE 228 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRV 110 + +L A+ +THAH DH + L+ + P+Y + L L+ Sbjct: 229 ALAAGPNSLDAVVLTHAHLDHSALIPILFKYGYDGPIYTTAPTRDLMGLLQLDYLDVASK 288 Query: 111 YERVSKKIPCISFQAGDK---VDVGA-------FSIESVRVNHSIPET-MALVIRSPVGN 159 R A ++ G + H + I N Sbjct: 289 EGRTPPYESQQVRDALKHTIPLEFGNVTDIAPDIKLTMHNAGHILGSAVCHFHIGEGRYN 348 Query: 160 IVHTGDWKL-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + +GD D + G V D + L+ +ST + + ++ + Sbjct: 349 VAFSGDIHYKDTRLLDGAVNDFPR--------VETLVLESTYGGKNDYQTDQSDSERVLR 400 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGI 273 D++ + G VL+ F+ V R + ++ + E+ I + L ++ A + Sbjct: 401 DVINESYENDGKVLIPAFA--VGRSQELMLVLEEAMRKGDIPTMPVYLDGMIREATAIHT 458 Query: 274 IKKDQLFLSDESFGLYPREQLIVI---------------ATGSQGEPRSALAQLSRG--- 315 + L LY E + + + + G Sbjct: 459 AYPEYLRDDLRQRILYEDENPFLAEQFEQVDGGDEMRQDIADDEPAIILTTSGMVTGGPV 518 Query: 316 --EMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLV-------EQGVRVIAEDAECPV 365 +R + T+ F G I ++ + + + E Sbjct: 519 MSWLRLLGSDPDSTMAFVGYQAEGTLGRQIQRGQDEITLGDTSGPRAERVSLRLNVETVD 578 Query: 366 HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEP---LHLVAHKELALQEGIACVPPVRNGK 420 SGH L+ + + RP+ ++ +HG+ L + + + Sbjct: 579 GFSGHADRQGLESFVETMHPRPEKILCVHGDASTTNQLSSALYQKFNMRTHNPKNLETFR 638 Query: 421 M 421 + Sbjct: 639 L 639 >gi|242398133|ref|YP_002993557.1| predicted metallo-beta-lactamase [Thermococcus sibiricus MM 739] gi|242264526|gb|ACS89208.1| predicted metallo-beta-lactamase [Thermococcus sibiricus MM 739] Length = 513 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 79/497 (15%), Positives = 146/497 (29%), Gaps = 124/497 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----------GV---------- 51 G IG + + + D G++F K L G+ Sbjct: 8 GANTIGGSKIHVE---ECNNGLFL-DFGMNFAKYSLYYEEFMSERTARGIYDLWHLNLLP 63 Query: 52 -------DLVFPDITFIMKERKNL--MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 DL+ D+ + + A+ I+HAH DH G + L ++ + SP I Sbjct: 64 KLNIYRRDLIPRDLVNEVTRYPKVPANAVLISHAHLDHVGNVALL--DENISIVGSPTTI 121 Query: 103 GLLEAK-----------------------------RVYERVSKKIPCISFQAGDKVDVGA 133 +L+A ++ S + Sbjct: 122 AILKALNDTSGGGSHFGMEIPYYKVKKNKDSEGYILEADKKSHYPSRKVILSEAISSFHD 181 Query: 134 F------------------------------SIESVRVNHSIPETMALVIRSPVGNIVHT 163 F I++ V+HSI A I ++ +T Sbjct: 182 FLFYRPGQESPKAKKIIPSDVKSLNDEDLGFEIKAFSVDHSIYGATA-YIIEGDVSLAYT 240 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMK 222 GD++ + G ++ + L+ + T R E +SE+ + +N I++ Sbjct: 241 GDFR-----LHGKSGNETRKFIREAKNASILITEGTRTGREEHENVSEQEVYENALKIVE 295 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS--------LKRVVSVAIDVGII 274 AKG V+ + + R+ S +IAE+ R++++ + V + I Sbjct: 296 EAKGLVIGDFSARNFERLESFKEIAEKTERELIVTAKDAYFLHALKMVEGVDRLKGLRIY 355 Query: 275 KKDQLFLSDES----FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + Y + E + T I+ Sbjct: 356 GNFKASQQKWEELVVWSNYAEYYISPFEIRKNQEDYILCFSFYDMPHLLDVMPNGGTYIY 415 Query: 331 SSRAIPGNEVAIG--HIKNRLVEQGVRVIAEDAEC--------PVHVSGHPYPNDLKRMY 380 SS G E + N L G V +H SGH +L+ + Sbjct: 416 SSSEAFGEEQEFSFLRLWNWLQYFGFEVHGFRINGYGKPIFEKGLHASGHISREELRGII 475 Query: 381 QWIRPQVLVAIHGEPLH 397 + P ++ +H E Sbjct: 476 DEVNPDYIIPVHTENPM 492 >gi|325959399|ref|YP_004290865.1| RNA-metabolising metallo-beta-lactamase [Methanobacterium sp. AL-21] gi|325330831|gb|ADZ09893.1| RNA-metabolising metallo-beta-lactamase [Methanobacterium sp. AL-21] Length = 497 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 78/483 (16%), Positives = 154/483 (31%), Gaps = 110/483 (22%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----------GV-DLV----F 55 GGV EIG N L G S +D G+ F K + G+ D V Sbjct: 8 GGVDEIGGNKILVKDGKTS----FFLDFGMGFSKANEYLSEFLQPRKSNGILDFVELEFL 63 Query: 56 PDI------TFIM------KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 P I ++ + ++ + ++H+H DH +H L +P++ S + Sbjct: 64 PYIKGIYREDYLEHVGIKYEPEPSVDGVLLSHSHVDHVAYVHHLRE--DIPIFLSQESYL 121 Query: 104 LLEAK-------RVYERVSKKIPCI---------------------SFQAGDKVDVGAFS 135 +L A KK + + +G FS Sbjct: 122 ILRALEETGASAFSEYLHLKKTFHMGPTKKGDGYKRLKLAVERDIRIVKPYKPFSIGDFS 181 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM 195 I+S V+HS+P + + +V+TGD + ++T+ + L+ Sbjct: 182 IKSAPVDHSLPGASGYIAVNDEETVVYTGDLRF--HGRQPELTN-KFVKESKKSRPNTLI 238 Query: 196 CDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 + T + +SE I+ +++ K V+V + R+ + A++ GR++V Sbjct: 239 TEGTRIG-DSESLSEFEIEAKAIKEIEDLKDLVVVNFPVRDLDRLVTFYRAAQETGRELV 297 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL--------------------------- 288 + SLK+ + + G+ + Sbjct: 298 V---SLKQAYILNLFEGLGYPKIEDVMVYKPKKGWGLLSDDRYSCVNDEWICSSDLDPKQ 354 Query: 289 -----------YPREQLIVIATGSQGEPRSALAQLSRGEMR-NVKLAEKDTVIFSSRAIP 336 Y V P + + E + + + + S P Sbjct: 355 LMADYKIWEREYINWDNTVTHHDLSQNPEDYIFRCDFFEFKELIDIKPESGTYIKSSTEP 414 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + ++ + + H SGH ++ M + I+PQ + +H + + Sbjct: 415 -FDKQMEIMEEKAETWLNHFNLDIMRG-YHASGHASGREILEMVREIKPQRVYPVHTQHV 472 Query: 397 HLV 399 L Sbjct: 473 ELF 475 >gi|316976818|gb|EFV60027.1| cleavage and polyadenylation specificity factor subunit 3 [Trichinella spiralis] Length = 687 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 77/511 (15%), Positives = 150/511 (29%), Gaps = 75/511 (14%) Query: 2 KNEELVFLPL--------GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL 53 +++EL+ PL G E+G + L + K I++DCG+ L GVD Sbjct: 8 EDDELIIKPLYEFQCKVLGAGQEVGRSCILIQF----KGKSILLDCGI---HPGLNGVDA 60 Query: 54 VFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL------- 104 P + I + + + +TH H DH G L + + + Sbjct: 61 -LPFVDTIDC--EKVDLLLVTHFHLDHCGGLPWFLEKTTFRGRCFMTHATKAIYPIILSD 117 Query: 105 --------LEAKR-VYERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 L+ + + K + I ++ +V H + +I Sbjct: 118 YVKVSNIGLDQMLYSEDELEKSMDKIELIDFHEQKEVNGIKFWCYVAGH-VLGACMFMIE 176 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKG 212 I++TGD+ +D L + + L+ +ST + E Sbjct: 177 IAGVRILYTGDYSRLEDRHLCA-------AEVPSIRPDVLIAESTYGTQIHENREDREHR 229 Query: 213 IKKNIYDIMKNAKGCVL-----------------VTTFSSSVSRIRSII-DIAEQIGRKI 254 +Y I+ C++ T + + I + + Sbjct: 230 FTSMVYTIVSRGGRCLIPVFALGRAQELLLILDEFWTKHAELQNIPIFFASSLAKKCMAV 289 Query: 255 VLLGSS-LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 S + + + I V + S S + V+ P + LS Sbjct: 290 YQTFISGMNQNIQKQIAVQNPFLFKHVRSLRSIDFFEDIGPCVVLAS----PGMLQSGLS 345 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 R K+ I + + G + + K + G ++ V S H Sbjct: 346 RELFEMWCTDTKNGCIIAGYCVEGTLAKHILSEPKEIVGLNGAKLALRMQVAYVSFSAHA 405 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEI 431 + ++P LV +HGE ++ K ++E +++ P + Sbjct: 406 DYKQTSEFIRRLKPPNLVFVHGEATEMIRLKAAIMREYEDDPTCMQSFSPRNTEPVSLHF 465 Query: 432 IDEVVHG---LFLKDGFLIGKFADLGIAKRR 459 E G + +R Sbjct: 466 RGEKTTKVVGQMATKKAEHGDVVSGVMIRRN 496 >gi|76156582|gb|AAX27764.2| SJCHGC03746 protein [Schistosoma japonicum] Length = 251 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 44/237 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---KDDLPGVDLVFPDI 58 ++++L +PLG E+G + L + K I++DCG+ ++ LP +D PDI Sbjct: 10 ESDKLTIMPLGAGQEVGRSCILLTF----KGKKIILDCGIHPGLRNRESLPFIDA-IPDI 64 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV--YASPFAIGLLEAKRVYE---- 112 + I+H H DH G L L + Y + + Sbjct: 65 QST-------DLVLISHFHLDHCGGLPHLLLKTGAKLKCYMTHATKAIYRYLLADFVRVS 117 Query: 113 ---RVSKKI------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + + + +++V + H + +I Sbjct: 118 NSGGLPDQALYSDRDIVASLDHIETIDFHQELEVNGIKFSAFHAGH-VLGAAMFLIEIAG 176 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 I++TGD+ +D L + L+ ++T + E+ + Sbjct: 177 VKILYTGDFSRQEDRHLMC-------AEVPPIRPDVLITEATYGIHIHDKREEREAR 226 >gi|289579410|ref|YP_003478037.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289529123|gb|ADD03475.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] Length = 829 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 71/492 (14%), Positives = 152/492 (30%), Gaps = 77/492 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + L K I++DCG+ PD I + + A+ Sbjct: 7 GGANEVGASCYLI----NLDGKNILLDCGIRMSSTKDN-----LPDFRLIQEHGG-VDAV 56 Query: 72 FITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL--------LEAKRVYERVSKKIPCIS 122 ++HAH DH GAL + +Y + L L+ + Sbjct: 57 IVSHAHLDHTGALPIISRMYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHV 116 Query: 123 FQAGDKV-------DVGAFSIESVRVN----HSIPETMALVIRSPVGNIVHTGDWKLDDD 171 D+V F ++V I ++ I S G+I ++GD+ Sbjct: 117 KDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSIFYSGDFSGFRQ 176 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGCVL 229 + I + +ST + + E + + + I+ G V+ Sbjct: 177 NTIEGAF-------IPKLRPDVAIFESTYGDKLHANRELEETRLIEKVSSIINEG-GKVI 228 Query: 230 VTTFSSSVSRIRSIIDIAEQI-------------------GRKIVLLGSSLKRVVSVAID 270 + F+ + R + II I ++ R L + L++ ++ I Sbjct: 229 IPAFA--LGRAQEIILILKKAINKGLLKTKVYVDGMVREVCRVYKLNPNYLRQNLAKKIF 286 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--KLAEKDTV 328 G + + E + S+ ++ G + KLA+ + Sbjct: 287 KGNDIFFDDNVIEVEKPEMREEIIKESCV-----ILSSSGMITGGPSQWYVEKLAQDEKN 341 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV---------SGHPYPNDLKRM 379 + + E + + + E + + + + S H ++ + Sbjct: 342 LIAITGYQDEESPGRRLLDIMEESPENRKIKIDDKEILINASIDKFGLSAHADMGEILAL 401 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGL 439 + P+ + +HG+P + + ++ + V NG + + E Sbjct: 402 ANSLYPKKIFLVHGDPEIINFLGKEVQKDLKSEVYIPSNGDIYEIDIKNPRKQIEKQPYP 461 Query: 440 FLKDGFLIGKFA 451 + + + Sbjct: 462 SMNQNCTLTQEN 473 >gi|21229180|ref|NP_635102.1| mRNA 3'-end processing factor [Methanosarcina mazei Go1] gi|20907746|gb|AAM32774.1| mRNA 3'-end processing factor [Methanosarcina mazei Go1] Length = 416 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 62/411 (15%), Positives = 132/411 (32%), Gaps = 60/411 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + G + + I++D G+ + P+ K A+ Sbjct: 10 GGCREVGRS------GLLVNGE-ILLDYGIKAGE---------IPEYP---KNGMEPKAV 50 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAI---GLL---EAKRVY------------ER 113 ++H H DH GA+ +L +L+ V+ +P LL K + Sbjct: 51 LVSHGHLDHCGAVPNLM-YLNPEVFMTPPTADFTALLGRDTLKLAETTLSGVSPFDSDDL 109 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDA 172 G+ +++ H IP + I S ++ +TGD L + Sbjct: 110 QKLNHRTQRKDYGETFKTHGYNVCFYNAGH-IPGASGIHIESESGESLFYTGDLSLQETR 168 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLV 230 ++ + L+ +ST + E ++ I I + G L+ Sbjct: 169 LVPGA---EEFPE-----ADTLVLESTYFGEDHVPRKETE-ERFIESIHETLDIGGTALI 219 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 F+ + R + I+ + + G + + G + ++ L Sbjct: 220 PAFA--IGRTQEILMLLDAYGIRAYVDGMGRDVYKILKKYPEYLRNPDLLDRAFERATQV 277 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRN----VKLAEKDTVIFSSRAIPGNEVAIGHIK 346 + L G + L+ G + + ++ + + G + Sbjct: 278 KNHLRESVLGEPAVIVTTAGMLNGGPVLYYLSRLYNDPGSKILLTGYQVEGTNGRLALEH 337 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ---VLVAIHGE 394 + +G + + A S H +LK++ + + + +HGE Sbjct: 338 RMIETRGDILSLKPAIEQYDFSAHCGDRELKQLVKDFCDKGTERVFVMHGE 388 >gi|302787435|ref|XP_002975487.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii] gi|300156488|gb|EFJ23116.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii] Length = 517 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 64/455 (14%), Positives = 137/455 (30%), Gaps = 59/455 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---NL 68 G ++G + + G K IM DCG+ D + FPD + I K + Sbjct: 1 GAGQDVGKSCVIVSMG----GKKIMFDCGMHMGYQD----ERRFPDFSQISKTGDFTHEI 52 Query: 69 MAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + +TH H DH GAL PVY + L R + Sbjct: 53 DCVIVTHFHLDHVGALPYFTEVCGYEGPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQF 112 Query: 127 DKVDVGAFSIESVRV------------------NHSIPETMALVIRSPVGNIVHTGDWKL 168 + + + + V + +++ +V+TGD+ + Sbjct: 113 STLHIQQCMKKVIAVDLRQTIRVSRDLAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNM 172 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV 228 D LG I L+ +ST A K + + + Sbjct: 173 TPDRHLGA-------AQIDRLKPDLLITESTYATTIRESRLAKE-AEFLNVVHTCVSKGG 224 Query: 229 LVTTFSSSVSRIRSIIDIAEQI----GRKIVLL---GSSLKRVVSVAIDVGIIKKDQLFL 281 V S++ R + + + ++ K+ + G +++ + ++ Sbjct: 225 KVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYY-KLLISWTNQRIKD 283 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---------MRNVKLAEKDTVIFSS 332 + + + + + P + + G +++ E++ +I Sbjct: 284 TYVTRNAFDFKHVFPFDRTQLDGPGPCILFATPGMLTGGLSLEVLKHWAPVEQNLLIIPG 343 Query: 333 RAIPGNEVAI---GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + G G V++ + + S H + + + + P ++ Sbjct: 344 FCLAGTVAQKLCSGKPTRVEVDKRTTIDVRCQIHLLAFSAHTDAKGIMDLVRQVEPHNVI 403 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +HGE L + K E N ++ + Sbjct: 404 LVHGEKLKMDVLKARINNELGIPCHNPANHDVVEV 438 >gi|258512013|ref|YP_003185447.1| hydrolase of the metallo-beta-lactamase superfamily-like [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478739|gb|ACV59058.1| hydrolase of the metallo-beta-lactamase superfamily-like [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 437 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 132/413 (31%), Gaps = 38/413 (9%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-------VSFPKDDLPG--VDL---- 53 GG IG + + ++ D G F P DL Sbjct: 6 RITFFGGTRTIGGTIC----RVKTPSAQLVFDMGHVVRPASPMFSGPLRPRSTADLRAVG 61 Query: 54 VFPDIT--FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 + PDI + +R NL AI I+H H DH L + + + ++++ +L Sbjct: 62 ILPDIPELYTHDQRGNL-AICISHNHLDHTALLPYMANEIS--IFSTKETCKILRL-ISE 117 Query: 112 ERVSKKIPCISF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + P + + VG + V V+H P A+ I +P +V+TGD + Sbjct: 118 AAIEDQPPLRVIGVEPEEWRSVGDLQFQFVPVDHDTPGAAAIFITAPDVRLVYTGDLRFH 177 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + L+ + ++E+ + + I + M V Sbjct: 178 GWRPEVSRAFVEQARRFEPD--VLLIEGTRAGDEARPQVTEQELLRLIVEAMAGEARMVY 235 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 + R+ + A + R V +L VA + + + + Sbjct: 236 FNAYPRHPERVLAFARAAREAKRLPVFEARTL----YVASHFTDGLPEDIHVWADDELPD 291 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI---- 345 P + + G S + + + +I A PG + Sbjct: 292 PVAR-WLKDRGLPSLEASDVRKAPSDFAVELAYDRLWRLIDIGAAAPGLYIHSNGAPLGP 350 Query: 346 --KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 Q E + SGH +++++ + IRP+V + IH Sbjct: 351 FDPAWDNLQRWLAHFEVTFRAIGTSGHAALDEIEQAIEAIRPRVYLPIHSFHP 403 >gi|210075949|ref|XP_504965.2| YALI0F03817p [Yarrowia lipolytica] gi|223634672|sp|Q6C2Z7|YSH1_YARLI RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|199424917|emb|CAG77772.2| YALI0F03817p [Yarrowia lipolytica] Length = 827 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 64/503 (12%), Positives = 143/503 (28%), Gaps = 74/503 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ F+ LGG E+G + + + K IM+D GV L P Sbjct: 34 SDTFSFVALGGGREVGRSCHVISF----KGKTIMLDAGVHPAHSGL----ASLPFYD--E 83 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR----------- 109 + + + I+H H DH +L + + V+ + G+ Sbjct: 84 FDLSTIDILLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKGIYRWLLSDFVRVTSGAE 143 Query: 110 ------VYERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 ++ I ++V + H + I ++ Sbjct: 144 SDPDLYSEADLTASFNKIETIDYHSTMEVNGVKFTAYHAGH-VLGAAMYTIEVGGVKVLF 202 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ ++D L + L+C+ST E+ + Sbjct: 203 TGDYSREEDRHLNQ-------AEVPPMKPDILICESTYGTGTHLPRLEREQRLTGLIHST 255 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGII 274 KG + + + R + I+ I ++ I + K+ ++V + Sbjct: 256 LDKGGKCLLPVFA-LGRAQEILLILDEYWEAHPDLQEFSIYYASALAKKCIAVYQTYINM 314 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGE------------PRSALAQLSRGEMRNVKL 322 D + P + + P + +SR + Sbjct: 315 MNDNIRRRFRDQKTNPFRFKYIKNIKNLDRFDDMGPCVMVASPGMLQSGVSRSLLERWAP 374 Query: 323 AEKDTVIFSSRAIPG-NEVAIGHIKNRL---VEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 K+T+I + ++ G I + N + ++V A + + H Sbjct: 375 DPKNTLILTGYSVEGTMAKQIINEPNEIPSAQNPDLKVPRRLAVEELSFAAHVDFQQNSE 434 Query: 379 MYQWIRPQVLVAIHGEPLHLVA-----------HKELALQEGIACVPPVRNGKMLRLFPD 427 + + ++ +HGE ++ K ++ I ++ Sbjct: 435 FIDLVDSKNIILVHGELNNMQRLKAALLAKYRGLKNSPREKTIYNPRNCEEVELAFKGVK 494 Query: 428 PIEIIDEVVHGLFLKDGFLIGKF 450 + + ++ + G Sbjct: 495 VAKTVGKMAEEKPHVGQIISGVV 517 >gi|153955532|ref|YP_001396297.1| hypothetical protein CKL_2915 [Clostridium kluyveri DSM 555] gi|219855928|ref|YP_002473050.1| hypothetical protein CKR_2585 [Clostridium kluyveri NBRC 12016] gi|146348390|gb|EDK34926.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219569652|dbj|BAH07636.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 832 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 65/480 (13%), Positives = 151/480 (31%), Gaps = 74/480 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + F LGG E+G + L + I++DCG+ PD Sbjct: 2 MYNMNISF--LGGAREVGGSCILVKIY----NRNILMDCGIRQSSSKD-----ALPDFKS 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKR---------V 110 I ++ + AI I+H+H DH G+L + +YA+ L+ Sbjct: 51 IQEQGG-IDAIIISHSHMDHIGSLPIISKEYPLARIYATKMTKDLMRVLLYDSLKIMNNR 109 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIES---------VRVNHSIPETMALVIRSPVGNIV 161 + + + + +E + I + + +P G++ Sbjct: 110 EGEIPLYAESDVKNMLNSIFPINYMVEFPIFQDVKLTFYMAGHIAGAACVYVTTPEGSLF 169 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN----I 217 ++GD+ + + + + + ++T R S + +++ I Sbjct: 170 YSGDFSVFSQKTVEGL-------KVPRLRPDVAIFEATYGDRLH---SNREVEEERLIDI 219 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ------------------------IGRK 253 + K KG +L+ F+ + R + ++ ++ Sbjct: 220 INECKRKKGKMLIPAFA--LGRSQEVLLTIKKALNKNILKDIKVYVDGMIRDINRTYKLN 277 Query: 254 IVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 + L +SL + + I+ ++ + +I S G +Q Sbjct: 278 PLYLKNSLGKKILKGIEPFYDDNIIPIDDNKLRKKILEDDESLIIISSSGMLTGGYSQYY 337 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPG---NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 ++ ++ + PG E+ +L + V +S H Sbjct: 338 AEKIAPMENGYIVMTGYQDEESPGRKLLELLKEEKDKKLYINEKVIPVNCKVKNVGLSAH 397 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 +++K + ++ P+ + +HG + E V + ++ + + Sbjct: 398 SDKSEIKSLINFLSPRNIFIVHGNEDVIENFCMQLSSEVKGKVYAPKCSEIYDININKPR 457 >gi|320163324|gb|EFW40223.1| CPSF3 protein [Capsaspora owczarzaki ATCC 30864] Length = 802 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 53/443 (11%), Positives = 127/443 (28%), Gaps = 74/443 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++++ ++ PLG E+G + + + K IM DCG+ P Sbjct: 37 LESDLMILTPLGAGQEVGRSCFVLQF----KGKTIMFDCGLHPAYSGQ----AALPFFDS 88 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAK---------- 108 ++ + +THA + + + + V+ + + + Sbjct: 89 FDPGLDSIDVLLVTHA------GVPYIMTKTNFKGRVFMTHPTKAIYKWMVADFIRVSNV 142 Query: 109 ------RVYERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + + I + +V H + ++ ++ Sbjct: 143 SADEMLFNERDIDNTMARIETIDYHQEKEVNGIKFWCYNAGH-VLGACMFMVEIAGVKLL 201 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +TGD+ +D L I L +ST +R E+ + D+ Sbjct: 202 YTGDYSRHEDRHLMP-------AEIPTIAPDVLCVESTYGVRVHEPRVERE-GRFTKDVH 253 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGI 273 ++ R + ++ I ++ I S ++ +++ Sbjct: 254 DIVMRGGKCLLPVFALGRAQELLLILDEFWESKPALHNIPIYYASSLARKCMAIYQTYIN 313 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGS----------QGEPRSALAQLSRGEMRNVKLA 323 +++ + + + I + S P LSR Sbjct: 314 QMNERIRRQFAISNPFMFKHIASIKSASEIDQSGPMVMMASPGMLQNGLSRDLFEQWCPD 373 Query: 324 EKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 ++ VI + ++ G + + + + + V V S H Sbjct: 374 SRNGVIVTGYSVEGTLAKSILSAPKEVPSLTGQKLPLRMSVTY------VSFSAHADFAQ 427 Query: 376 LKRMYQWIRPQVLVAIHGEPLHL 398 ++P +V +HGE + Sbjct: 428 TSEFIDALKPPHIVLVHGEATEM 450 >gi|67624341|ref|XP_668453.1| ENSANGP00000013258 [Cryptosporidium hominis TU502] gi|54659666|gb|EAL38233.1| ENSANGP00000013258 [Cryptosporidium hominis] Length = 750 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 75/483 (15%), Positives = 139/483 (28%), Gaps = 92/483 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMK 63 + +PLG ++G + + GS + +M DCG+ F + PD I Sbjct: 3 ISIIPLGAGQDVGRSCIIAKIGSKT----VMFDCGMHMGFKDERKY------PDFRLISA 52 Query: 64 ERKN------LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG-----------L 104 + + I+H H DH GAL P+ + + Sbjct: 53 TLDPLIINEYIDLVIISHYHLDHCGALPFFTEKIGYKGPIVMTYPTKSVSSVLLSDCCKI 112 Query: 105 LEAKRVYERVSKKIPC-------------------------ISFQAGDKVDVGAFSIESV 139 +E K + ++ + + + Q + + I Sbjct: 113 MEQKLLLQKTNADVVPPNETVYNNEYGFFTVSDVWSCMEKVKAIQLHQTIVISGIKITPY 172 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 H + ++ +IV+TGD+ + D LG I L+ +ST Sbjct: 173 YAGH-VLGASMFHVQVSDESIVYTGDFNMVRDRHLGP-------ALIPKLLPSLLISEST 224 Query: 200 NAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI-----IDIAEQIGR 252 A R +E+ + +Y +K G VL+ F+ + R + + I R Sbjct: 225 YATYIRPSRRSTERTFCEMVYSCLKRG-GKVLIPVFA--IGRAQELCILLEIYWRRMQIR 281 Query: 253 KIVLLGSSL-KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 + G S+ ++ S L + +F ++ + Sbjct: 282 FPIFFGGSMTEKANSYYQLFTNWTNTPLADNIFTFPHVLPYDKSILTLSGPAVLFATPGM 341 Query: 312 LSRGEMRNVKLAEKDTVIFSS---RAIPGN---EVAIGHIKNRLVEQGVRVIAE------ 359 L + L S IPG I N + Sbjct: 342 L----HTGLSLQAFKMWAPDSNNLTIIPGFCVSGTIGSKIINGAKRVYIDQKDPTTCIEV 397 Query: 360 -DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 + S H ++ + PQ + +HGE ++ E N Sbjct: 398 RCNVKYLSFSSHADSIGIQSLISHSEPQSIAFVHGERHGMLNLASFINSEFKIPTFCPHN 457 Query: 419 GKM 421 G + Sbjct: 458 GSI 460 >gi|304317834|ref|YP_003852979.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779336|gb|ADL69895.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 820 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 74/473 (15%), Positives = 149/473 (31%), Gaps = 69/473 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F GG E+G + L K I++DCG+ PD I + Sbjct: 1 MKFYFCGGASEVGASCYLV----NIDGKNILLDCGIRMSSSKDN-----LPDFQHIQENG 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGL--------LEAKRVYERVSK 116 + I I+HAH DH GAL + + +Y + A L L+ + Sbjct: 52 G-VDVIVISHAHMDHIGALPIISRIYPDAKIYMTHAAKDLTRVLLYDSLKIMEREAEIPA 110 Query: 117 KIPCISFQAGDKV-------DVGAF-----SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + +++ F + H I ++ I G+ ++G Sbjct: 111 YAEIHVKEMLNRIICHTPGHTFSPFLDADLKVTFYSAGH-IAGAASIYIVGNEGSFFYSG 169 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ + +I +ST + + E + + I ++K Sbjct: 170 DFSRFRQNTIEG-------ASIPKLRPDVAFFESTYGDKLHANRELEESRLVEKIGSVVK 222 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLG------SSLKRVVSVAID 270 N G VL+ F+ + R + II I ++ K+ + G K + + Sbjct: 223 NG-GKVLIPAFA--LGRAQEIILILKKAINKGMINTKVYVDGMVKDICRIYKLNPNYLRE 279 Query: 271 VGIIKKDQLFLSDESFGLYPRE--QLIVIATGSQGEPRSALAQLSRGEMRNV--KLAEKD 326 K + + P + ++ S+ L+ G + KLA + Sbjct: 280 NLAKKIFKGGEIFFDDNVMPVDIPEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDE 339 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV---------SGHPYPNDLK 377 + + E + E+ + + + V S H +++ Sbjct: 340 KNLIAITGYQDEESPGRRLLELTDEKDDDKKLKLGDKEIQVKCAVDKFGLSAHADMSEIL 399 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 ++ P+ + IHG+P + ++ V +NG + + Sbjct: 400 SFVNFLYPKKVFLIHGDPDVIDFLGREVQRDIRTDVYVPQNGDVHDIDIQNPR 452 >gi|302793925|ref|XP_002978727.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii] gi|300153536|gb|EFJ20174.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii] Length = 522 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 65/455 (14%), Positives = 137/455 (30%), Gaps = 59/455 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---NL 68 G ++G + + G K IM DCG+ D + FPD + I K + Sbjct: 6 GAGQDVGKSCVIVSMG----GKKIMFDCGMHMGYQD----ERRFPDFSQISKTGDFTHEI 57 Query: 69 MAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + +TH H DH GAL PVY + L R + Sbjct: 58 DCVIVTHFHLDHVGALPYFTEVCGYEGPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQF 117 Query: 127 DKVDVGAFSIESVRV------------------NHSIPETMALVIRSPVGNIVHTGDWKL 168 + + + + V + +++ +V+TGD+ + Sbjct: 118 STLHIQQCMKKVIAVDLRQTIRVSKDLAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNM 177 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV 228 D LG I L+ +ST A K + + + Sbjct: 178 TPDRHLGA-------AQIDRLKPDLLITESTYATTIRESRLAKE-AEFLNVVHTCVSKGG 229 Query: 229 LVTTFSSSVSRIRSIIDIAEQI----GRKIVLL---GSSLKRVVSVAIDVGIIKKDQLFL 281 V S++ R + + + ++ K+ + G +++ + ++ Sbjct: 230 KVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYY-KLLISWTNQRIKD 288 Query: 282 SDESFGLYPREQLIVIATGSQG---------EPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + + + + P LS +++ E++ +I Sbjct: 289 TYVTRNAFDFKHVFPFDRTQLDGNGPCILFATPGMLTGGLSLEVLKHWAPVEQNLLIIPG 348 Query: 333 RAIPGNEVAI---GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 + G G V++ + + S H + + + + P+ ++ Sbjct: 349 FCLAGTVAQKLCSGKPTRVEVDKRTTIDVRCQIHLLAFSAHTDAKGIMDLVRQVEPRNVI 408 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +HGE L + K E N ++ + Sbjct: 409 LVHGEKLKMDVLKARINNELGMPCHNPANHDVVEV 443 >gi|332030612|gb|EGI70300.1| Integrator complex subunit 11 [Acromyrmex echinatior] Length = 536 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 120/429 (27%), Gaps = 57/429 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ PLG ++G + L G + IM+DCG+ +D + FPD ++I+ E Sbjct: 3 DIKVTPLGAGQDVGRSCILVSMGGKN----IMLDCGMHMGFND----ERRFPDFSYIVPE 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLLEAKRVYERVSKKIP 119 + + I+H H DH GAL + P+Y + + R Sbjct: 55 GPATNYIDCVIISHFHLDHCGALPYFTEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN--HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + + V S+ L I++ V Sbjct: 115 KGESNFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHVLGAAMFWVH------- 167 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + G L+ G + + ++ M + Sbjct: 168 -------ECIDRGGKVLIP----VFALGRAQELCILLETYWERMNLKVPVYFALGLTEKA 216 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 + + K + ++ Y ++ Sbjct: 217 NNYYKMFITWTNQKIKKTFVQRNM---------------FDFKHIKPFDKAYIDNPGAMV 261 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR-- 355 + G + L+ + E + VI + G + N Sbjct: 262 VFATPGMLHAGLSL---QIFKKWAPNESNMVIMPGFCVQG--TVGHKVLNGTRRIEFENR 316 Query: 356 --VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 V + A + S H + ++ Q+ P+ ++ +HGE + KE QE Sbjct: 317 QIVEVKMAVEYMSFSAHADAKGIMQLIQYCEPKNVMLVHGEFAKMEYLKEKIKQEFGVSC 376 Query: 414 PPVRNGKML 422 NG+ Sbjct: 377 YNPANGETC 385 >gi|146304363|ref|YP_001191679.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702613|gb|ABP95755.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348] Length = 421 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 105/296 (35%), Gaps = 38/296 (12%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G G +S + +++D GV+F + D P+ + + + Sbjct: 8 LGGGNEVGR----AGIEISNSSESLILDYGVNFNQKDE-------PNFP-LQESPSKVKG 55 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQ-- 124 ++HAH DH GAL PVY + +L+ + + Sbjct: 56 FVVSHAHLDHVGALPIYQISSSKPVYGTGISKYITELMLKDFIKLSGPKVPFEWVEVKKT 115 Query: 125 --------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 G++V++G F++ + H IP + V+++ G+I +TGD + Sbjct: 116 MDNFRTFNYGEEVEIGGFTVTTSSAGH-IPGSAITVVKTEKGDIAYTGDINV-------T 167 Query: 177 VTDKDSLCAIG-NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + + ++ ++T + ++ +M+ +G V + Sbjct: 168 MAKLVKPAELEVMRKSRVIITEATYGKFNHPTR-KSVEEEFYASVMEVLEGGGTVLVPAF 226 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG--IIKKDQLFLSDESFGLY 289 S+SR + I+ I + + L R + + I + Y Sbjct: 227 SLSRSQEILSILAEKNIPYPVYYDGLARTIMEIMIDNSQYINNKEALRKAYDEFQY 282 >gi|41614872|ref|NP_963370.1| hypothetical protein NEQ076 [Nanoarchaeum equitans Kin4-M] gi|40068596|gb|AAR38931.1| NEQ076 [Nanoarchaeum equitans Kin4-M] Length = 635 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 71/448 (15%), Positives = 136/448 (30%), Gaps = 90/448 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----------SFPKDDLPGVDLV 54 + LGG ++G + L + I++D GV ++P +LP D+ Sbjct: 188 WVRVSFLGGASQVGRSALLL----QTKESRILLDFGVDLSLPPNNKNAYPIVELPEFDV- 242 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE- 112 K L A+ ITHAH DH G + L+ PVY +P + + + Sbjct: 243 -----------KELDAVVITHAHLDHVGFVPFLYKMGYKGPVYLTPPTLDIATLSLLDYL 291 Query: 113 --RVSKKIPCISFQAGDKVDVGAFSIESVRVN-------------HSIPETMALV--IRS 155 + S + +IE + I + I + Sbjct: 292 RIANENNVKLFSGDDIRNFVKHSITIEYGQTTDIASDVKLTFYNAGHILGSALAHLNIAN 351 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 N+++TGD+K+ + I + + +ST E+ K+ Sbjct: 352 GYSNVLYTGDYKVKPTFLFDG-------AQIPQAKVNIAITESTYGDTYHK-PREEVEKE 403 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 + + + K + V R + I+ + + R ++ V I + + Sbjct: 404 FLSFVKEVIKRKGKLLIPVLGVGRAQEILYLLVKSIRA--------NKLDEVPIYLDGVV 455 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + E I G + + R V E ++ +S + Sbjct: 456 WEITAIHTAYPEYLKEEIRNKILAGKNPFIDKFVHRAPRNREEIVYSTEPSIILATSGML 515 Query: 336 PG---------NEVAIGHIKNRLVEQGVRVIAEDAECPVH-------------------- 366 G + + QG + + V Sbjct: 516 VGGPSVQYLKLMAEDPKNAIAFVSYQGPNTLGRQIQSGVREVEIDGQLIKINLEVRSFEG 575 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 SGH +++ + +RP +V HGE Sbjct: 576 FSGHADKGEIESFLRRVRPGRVVINHGE 603 >gi|66357778|ref|XP_626067.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II] gi|46227299|gb|EAK88249.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II] Length = 751 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 76/487 (15%), Positives = 138/487 (28%), Gaps = 92/487 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDIT 59 K + +PLG ++G + + GS + +M DCG+ F + PD Sbjct: 1 KIMTISIIPLGAGQDVGRSCIIAKIGSKT----VMFDCGMHMGFKDERKY------PDFR 50 Query: 60 FIMKERKN------LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG----LLEA 107 I + + I+H H DH GAL P+ + LL Sbjct: 51 LISATLDPLIINEYIDLVIISHYHLDHCGALPFFTEKIGYKGPIVMTYPTKSVSSVLLSD 110 Query: 108 --KRVYERVSKKIPCISFQA------------------------------GDKVDVGAFS 135 K + +++ + + + + Sbjct: 111 CCKIMEQKLLLQKTNVDVAPPNETVYNNEYGFFTVSDVWSCMEKVKAIQLHQTIVISGIK 170 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM 195 I H + ++ +IV+TGD+ + D LG I L+ Sbjct: 171 ITPYYAGH-VLGASMFHVQVSDESIVYTGDFNMVRDRHLGP-------ALIPKLLPSLLI 222 Query: 196 CDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI-----IDIAE 248 +ST A R +E+ + +Y +K G VL+ F+ + R + + I Sbjct: 223 SESTYATYIRPSRRSTERTFCEMVYSCLKRG-GKVLIPVFA--IGRAQELCILLEIYWRR 279 Query: 249 QIGRKIVLLGSSL-KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 R + G S+ ++ S L + +F ++ + Sbjct: 280 MQIRFPIFFGGSMTEKANSYYQLFTNWTNTPLADNIFTFPHVLPYDKSILTLSGPAVLFA 339 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSS---RAIPGN---EVAIGHIKNRLVEQGVRVIAE-- 359 L + L S IPG I N + Sbjct: 340 TPGML----HTGLSLQAFKMWAPDSNNLTIIPGFCVSGTIGSKIINGAKRVYIDQKDPTT 395 Query: 360 -----DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + S H ++ + PQ + +HGE ++ E Sbjct: 396 CIEVRCNVKYLSFSSHADSIGIQSLISHSEPQSIAFVHGERHGMLNLASFINSEFKIPTF 455 Query: 415 PVRNGKM 421 NG + Sbjct: 456 CPHNGSI 462 >gi|302808975|ref|XP_002986181.1| hypothetical protein SELMODRAFT_234972 [Selaginella moellendorffii] gi|300146040|gb|EFJ12712.1| hypothetical protein SELMODRAFT_234972 [Selaginella moellendorffii] Length = 684 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 69/466 (14%), Positives = 139/466 (29%), Gaps = 75/466 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ +PLG E+G + Y K I+ DCG+ + P I Sbjct: 21 EKMEIMPLGAGSEVGRSCCHMTY----KGKTILFDCGIHPGYTGM----AALPYFDEID- 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 72 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKISKGSVE 130 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + V K + I ++V H + ++ +++TG Sbjct: 131 DMLYDEQDVLKTMDKIEVIDFHQTMEVNGIRFWCYTAGH-VLGAAMFMVDIAGIRVLYTG 189 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST ++ + EK + I + Sbjct: 190 DYSREEDRHL-------KAAEMPEFSPDVCIIESTYGVQIHQPRHVREKRFTETIAQTVS 242 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 + G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 243 HG-GRVLIPAFA--LGRAQELLLILDEYWEAHPELQHIPIYYASPLAKKCMAVYQTYINS 299 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + S + V + P + LSR Sbjct: 300 MNDKIKSQYENSNPFNFKHISPLKSIEQFEDVGPSIVMASPSGLQSGLSRQLFDRWCQDR 359 Query: 325 KDTVIFSSRAIPG-------NE-VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K+ + + G NE + + +V +RV+ + S H Sbjct: 360 KNACVIPGYVVEGTLAKTILNEPKEVALVSGLVVPLNMRVVY------ISFSAHADFAQT 413 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 +RP +V +HGE + K +L Q V Sbjct: 414 SAFLGELRPPHIVLVHGEQNEMGRLKVKLQAQFAEQNVKINSPKNC 459 >gi|150401471|ref|YP_001325237.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014174|gb|ABR56625.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 426 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 139/426 (32%), Gaps = 59/426 (13%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IGM+ + + I++DCG++ + LP + ++ A+ Sbjct: 8 GGCHQIGMSCVEI----DTKKSKILVDCGMNPSDNSLPKI------------NPNDIDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 ++H+H DH GA+ P+Y++ ++ L+ K ++ Sbjct: 52 VVSHSHLDHCGAVPYF--NFKNPIYSTIPSVDLMYILWKDISKLSKTYPEENIQKAMNNI 109 Query: 132 G------------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ H I + ++ + +++TGD + L Sbjct: 110 KAVNYREPKKITSDITMRLYDAGH-ILGSSSVYLDIGGKKLLYTGDINEIETRTL----- 163 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTF--- 233 + I L+ +ST S K ++K + D + G V++ F Sbjct: 164 --KSADTDIDEIDTLIIESTYGAPTDIKPSRKALEKQLIDEISATIEKGGKVIIPVFAVG 221 Query: 234 -SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 S + + ++ + R + + SL + + ++ ++ + P Sbjct: 222 RSQEIIAVLHNYMRSKLLKRVPIYVEGSLVHTTGIYMSHSEWLNPKIR-NNLENRINPFG 280 Query: 293 QLIVIATGSQGEPRSALAQLSRGEM---------RNVKLAEKDTVIFSSRAIPGNEVAIG 343 + ++ + E + + + +KL + E Sbjct: 281 DVTIVNKENSSEIYNKEPCIIISTSGMVQGGPILQYLKLLKSPKNKIILTGFQAEETLGR 340 Query: 344 HIKN---RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLV 399 +++ + ++ V S H N L R + I +P+ + +HGE + Sbjct: 341 QLEDGAEEITPFRNKIPVRGEVVKVEFSAHSDYNSLIRYMKKIPKPKKVFVMHGERYQSL 400 Query: 400 AHKELA 405 + Sbjct: 401 SFAMTI 406 >gi|218884598|ref|YP_002428980.1| mRNA 3'-end polyadenylation factor [Desulfurococcus kamchatkensis 1221n] gi|218766214|gb|ACL11613.1| mRNA 3'-end polyadenylation factor [Desulfurococcus kamchatkensis 1221n] Length = 647 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 144/449 (32%), Gaps = 52/449 (11%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N + LGG E+G + L + I++D G++ D P + +P + Sbjct: 184 RNNYVKVTGLGGFREVGRSAILVE----TRESKILLDLGLNTGTIDDP--NKAYPFLEID 237 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----ERVSK 116 + L + +THAH DH G + L+ + PVY + L+ R S Sbjct: 238 SLRLEELDGVVVTHAHLDHVGLVPILYKYGYRGPVYVTKPTRELMIVMLKDLIDVTRRSG 297 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETM---------------ALVIRSPVGNIV 161 + S + + + +++ V P+ L I + NIV Sbjct: 298 RYIPFSERDISTMLLHTITVDYDEVTDVAPDIKLTMYNAGHILGSAIVHLHIGMGLHNIV 357 Query: 162 HTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREG------TCISEKGIK 214 +TGD+K + +L T + + EG + E SE+ Sbjct: 358 YTGDFKYSETRLLNKANTVFPRVETLIMEGTYGATLQESRIQAEQQLIDIVKRTSERN-G 416 Query: 215 KNIYDIMKNAKGCVLV-----TTFSSSVSRIRSIIDIAEQ-----IGRKIVLLGSSLKRV 264 + + +G ++ + + R+ ++ + L SL+ Sbjct: 417 VVLIPVFAVGRGQEIILILNEAMKNGRIPRMNIYVEGLVNEVTAIHTQYPEYLNKSLREA 476 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS----QGEPRSALAQLSRGEMRNV 320 + + + + + + ++ +I S G L L+ E ++ Sbjct: 477 IYNGENPFTSEWLKPIETGVARPDIIEDKPSIIIATSGMLTGGPAVDYLRLLASDERNSL 536 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 R I I + V I + SGH +L Sbjct: 537 VFVGYQAEGTLGRKIKDGAREITMVVENKV--EAIPIKLEVYSIEGFSGHSDQRELLEYA 594 Query: 381 QWI--RPQVLVAIHGEPLHLVAHKELALQ 407 + + RP+ ++ HGEP L L Sbjct: 595 RDVSPRPRKILLNHGEPTALSTLATLLRS 623 >gi|15669421|ref|NP_248231.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus jannaschii DSM 2661] gi|2496166|sp|Q58633|Y1236_METJA RecName: Full=Uncharacterized protein MJ1236 gi|1591868|gb|AAB99240.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus jannaschii DSM 2661] Length = 634 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 70/467 (14%), Positives = 147/467 (31%), Gaps = 59/467 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + + ++IDCG++ + D FP Sbjct: 179 WIRVSFLGGAREVGRSCLYV----QTPDTRVLIDCGINVACE-----DKAFPHFDAPEFS 229 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 ++L A+ +THAH DH G + L+ + PVY + L+ + + K Sbjct: 230 IEDLDAVIVTHAHLDHCGFIPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEV 289 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + I+ P A + +H G+ + Sbjct: 290 PYTSKDIKTCVKHTIPIDYGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTG 349 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK---GCV 228 + L + L+ +ST + + ++ + ++ G V Sbjct: 350 DIKFETSRLLEPAVCQFPRLETLIIESTYGAYDDVLPEREEAERELLRVVSETTDRGGKV 409 Query: 229 LVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKRVVSVAIDVGIIKKD----QLFLSD 283 L+ F V R + ++ + E+ + I L ++ A + + ++ Sbjct: 410 LIPVFG--VGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKEMRQKI 467 Query: 284 ESFGLYPR------------EQLIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKDT 327 G P E+ VI + + L+ G +++ EK+ Sbjct: 468 FHEGDNPFLSEVFKRVGSTNERRKVIDSDEPCVILATSGMLTGGPSVEYLKHLAPDEKNA 527 Query: 328 VIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +IF G I I + + + + SGH L + Sbjct: 528 IIFVGYQAEGTLGRKVQSGWKEIPIITRNGKTKSIPINLQVYTIEGF-SGHSDRKQLIKY 586 Query: 380 YQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ P+ ++ +HGE + + + N +R+ Sbjct: 587 IRRLKPSPEKIIMVHGEESKCLDFADTVRRLFKKQTYVPMNLDAIRV 633 >gi|327311459|ref|YP_004338356.1| beta-lactamase domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326947938|gb|AEA13044.1| beta-lactamase domain protein [Thermoproteus uzoniensis 768-20] Length = 635 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 79/485 (16%), Positives = 154/485 (31%), Gaps = 85/485 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 K + LG E+G + L ++ +++DCG+ +++ P ++ V Sbjct: 171 KEGPITVSFLGASMEVGRSAILV----DTTESKVLLDCGLKPSQYEEEFPLLEQV----- 221 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRV 110 + +L A+ ++HAH DH G L L+ + PVY + L +E K Sbjct: 222 ----DLDSLDAVVLSHAHMDHVGCLPYLYKYGYRGPVYMTDPTKYLTYILLTDYVELKER 277 Query: 111 YERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGN 159 ++ I+ + D+ + H I + I + N Sbjct: 278 EGQIPPYTKSDIETLMYHIITLDYEEVTDIAPDIKLTLYDAGHEIGSALVHLHIGNGRYN 337 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+K +L + + L+ +ST R+ + + Sbjct: 338 ILYTGDFKFGRTNLLNKAVN--KFKR-----VEMLIMESTYGGRDDVQPPRVEAENTLVK 390 Query: 220 IMKNA---KGCVLVTTFSS-----------------SVSRI-----RSIIDIAEQIGRKI 254 + +G VL+ FS+ ++ R+ I++ Sbjct: 391 AITETIENRGKVLIPAFSTGRAQEILYILNREINRGNLKRVPIYVDGMIVETLNAYLMYP 450 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 L + + ++ + Q+ I + A + Sbjct: 451 HFLNREVAEEIYGGVNPFTSSGSIEVVERAKRIEDRINQIARITQDERPGVIIAPHGMLN 510 Query: 315 G-----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV---- 365 G ++ + +IF S I N + VR I+ Sbjct: 511 GGPILDYFVHLAPDPANKLIFVSYQAEN--TLGRRILNGEKDFIVRSISMGETKVSMRMG 568 Query: 366 -----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 SGH +L + + + RP+ +V IHGEP +V+ R Sbjct: 569 VVSIPGFSGHSDRRELMKYVETVEPRPRKVVLIHGEPSKIVSLATSIELRYKITTVIPRV 628 Query: 419 GKMLR 423 G+ +R Sbjct: 629 GERIR 633 >gi|146170679|ref|XP_001017643.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila] gi|146145062|gb|EAR97398.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila SB210] Length = 675 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 80/517 (15%), Positives = 153/517 (29%), Gaps = 117/517 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI- 61 + + PLG ++G + L K IM+DCG+ +DL +PD I Sbjct: 7 KDCIEVYPLGAGQDVGRSCILIKIY----DKIIMLDCGLHMGVNDL----TRYPDFEKIK 58 Query: 62 ------MKERKN--LMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVY 111 K + + + + I+H H DH GAL P+Y + LL Sbjct: 59 QIWNIPEKRKWDQIIDLVLISHFHLDHIGALPYFTEIYNYDGPIYMTSPTKALLPYMCED 118 Query: 112 ERV---------------------------------------SKKIPCISFQAGDKVDVG 132 R + Q + +DV Sbjct: 119 FRKVITESQKKEFTDDSIPQTPAQKIINDSRYPLIYTQENIQKCFQKAKTIQLLETIDVN 178 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I+ H + +I +V+TGD+ + D LG I Sbjct: 179 GIKIKPYYAGH-VLGACMFMIEYRNVKVVYTGDFHSNADRHLGA-------AWIEKVKPD 230 Query: 193 ALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ + T R+ EK K I + + G VL+ F+ + R + + + E Sbjct: 231 LLISECTYGTIIRDSKRAREKNFLKQIQETIDQG-GKVLIPVFA--LGRAQELCILLETY 287 Query: 251 ------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + +++ +++ S + ++ + + + Sbjct: 288 WQRTQSQVPVYFAAGMIEKANFYYKLFVNWTNEKIKSSYLTDNMFDFKYIKPFSRSLIKT 347 Query: 305 PRSAL---------AQLSRGEMRNVKLAEKDTVIFSSRAIPG------------------ 337 + A LS + EK+T+I + G Sbjct: 348 NGPMVLFATPGMLHAGLSMQVFKEWCYDEKNTLIIPGYCVAGTLGCVLISSFFFHIMKIN 407 Query: 338 -----NEVAIGHIK-NRLVEQGVRVIAEDAECPVH-------VSGHPYPNDLKRMYQWIR 384 I N+L+ +VI + V+ S H + + + Sbjct: 408 FEFYLFFTLFDKIIGNKLLSGCKQVILDKKVYDVNMQVKNMSFSAHADAKGILGLIKHCE 467 Query: 385 PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 P+ ++ +HG+ ++ E + V N ++ Sbjct: 468 PKNVMLVHGDVTRMMPLAETIRDQFEIQVFTPANFEL 504 >gi|66820693|ref|XP_643926.1| beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] gi|74860395|sp|Q86A79|CPSF3_DICDI RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; Short=Cleavage and polyadenylation specificity factor 3 gi|60472339|gb|EAL70292.1| beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] Length = 774 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 64/440 (14%), Positives = 135/440 (30%), Gaps = 65/440 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L P+G E+G + L Y K +M DCGV L + P I Sbjct: 33 DDILEITPIGSGSEVGRSCVLLKY----KGKKVMFDCGVHPAYSGL----VSLPFFDSIE 84 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIG----------------- 103 + ++ + ++H H DH A+ V+ + Sbjct: 85 SDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSNITR 144 Query: 104 ---LLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 +L K +R +KI + + KV+ + H + +I I Sbjct: 145 DDDMLFDKSDLDRSLEKIEKV--RYRQKVEHNGIKVTCFNAGH-VLGAAMFMIEIAGVKI 201 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++TGD+ +D L + L+ +ST ++ E+ K+ + Sbjct: 202 LYTGDFSRQEDRHLMG-------AETPPVKVDVLIIESTYGVQVHEPRLERE-KRFTSSV 253 Query: 221 MKNAKGCVLVTTFSSSVSRIRSI------------------IDIAEQIGRKIVLLGSSLK 262 + + ++ R + + I A + +K + + + Sbjct: 254 HQVVERNGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYI 313 Query: 263 RVVS--VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 +++ V + + G+ + P + LSR Sbjct: 314 NMMNDRVRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVF--MASPGMLQSGLSRQLFERW 371 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ--GVRVIAEDAECPVHVSGHPYPNDLKR 378 +++ ++ ++ G + + + V V V S H Sbjct: 372 CSDKRNGIVIPGYSVEGTLAKHIMSEPAEITRLDNVNVPLNLTVSYVSFSAHSDFLQTSE 431 Query: 379 MYQWIRPQVLVAIHGEPLHL 398 Q I+P +V +HG+ + Sbjct: 432 FIQEIQPPHVVLVHGDANEM 451 >gi|302872375|ref|YP_003841011.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] gi|302575234|gb|ADL43025.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] Length = 821 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L G + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKN----ILIDSGIRMKEDK-------LPNLQVLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + H+ Y + L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPHIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ V I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPVEGIRVTFFPAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNA 224 D + ++ ++C+ST R T S E+ + IY+++ Sbjct: 169 SADKQLTVDK-------ASVPKIRPDIVICESTYGDRLHTNRSFEEERLFNTIYEVISQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + +I I Sbjct: 222 -GKVLIPAFA--IGRAQEVILILRNY 244 >gi|254302192|ref|ZP_04969550.1| possible hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322384|gb|EDK87634.1| possible hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 399 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 59/412 (14%), Positives = 141/412 (34%), Gaps = 31/412 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG ++ S I++D G + + ++ P+I + K + + Sbjct: 8 GQNQIGGSI----IEISSKNTKIILDIGSNLDDKE-----IIIPEIEGLFKGKPKYDGVL 58 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 I+H H DH G + + +Y + + + Y +F+ ++ +G Sbjct: 59 ISHYHGDHIGLATKILPEIS--IYMGEKSYEIHKVSNEYIGKEYLKEPKTFKTEEEFLIG 116 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I +HS ++ ++ I++TGD++ G + + L + +L Sbjct: 117 DIKIIPYLCDHSAFDSYMFLLDCEGKKILYTGDFRS-----NGRKSFEPLLRKLPKVDVL 171 Query: 193 ALMCDSTNAMREGT-CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 + + + G ++EK ++K ++++ V V ++++ RI + IA Sbjct: 172 ITEGTNFSNEKIGKINLTEKELEKKGIELLEGNNRPVFVLMAATNIDRIVTFYKIANATK 231 Query: 252 RKIVLLGSS------LKRVVSVAIDVGIIKKDQLFLSDESF-GLYPREQLIVIATGSQGE 304 R +L + + + ++ YP+ ++ S+ Sbjct: 232 RLFLLDTYAGLITDTIGGNIPNPRTFPNVRIFLTNQDKYEILKNYPQNKIGKKEIVSKNF 291 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + + K + + G + +N Sbjct: 292 MMCVRTSMKKYLEDRSKEFSFEGCVLFYSMWEGYKKQ----ENMKEFLKFMEEKGVKIIS 347 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHG---EPLHLVAHKELALQEGIACV 413 +H SGH D ++ + I P++++ +H E + E+ I + Sbjct: 348 LHTSGHADEKDFDKLIKKIEPKIIIPVHTENSEWFKKYENCEIICDRNIIKI 399 >gi|146296048|ref|YP_001179819.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409624|gb|ABP66628.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 821 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 78/500 (15%), Positives = 168/500 (33%), Gaps = 75/500 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L G + I++D G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKN----ILLDSGIRMKEDK-------LPNLQLLRELG 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 I+HAH DH G+L + H+ Y + L++ + + Sbjct: 50 GA-DVCLISHAHLDHIGSLPLIAREYPHIFFYTNQPTKDLIKVLLYDSLKIMDAKEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAF----------SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 D+ F + H I + I++ G++++TGD Sbjct: 109 IYAEKNVEDLLDRTITYGFNYTFEPLEGIKVTFFPAGH-ILGASMIFIQTQEGSVLYTGD 167 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKN 223 + D + +I ++C+ST R E+ + +IY+ + Sbjct: 168 FSTDKQLTVDK-------ASIPKIRPDVVICESTYGDRLHTNRNYEEERLFNSIYEFISK 220 Query: 224 AKGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLLGSSLKRVVSVAIDVGI------ 273 G VL+ F+ + R + II + ++ + + + R V Sbjct: 221 G-GKVLIPAFA--IGRAQEIILILRNYMKKKKVEFNVFIDGMVREVIRVYKNNPTFLSSR 277 Query: 274 -----IKKDQLFLSDE-SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--KLAEK 325 +K +++FLSD +++ ++++ S+ L+ G KL E Sbjct: 278 YYKKVLKGEEIFLSDNIDIITDKKQREEIMSSSDPCVIISSSGMLTGGPSVFYAEKLVEN 337 Query: 326 DTVIFSSRAIPGNEVAIGHIKN---------RLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 + + E + ++ G + +S H + + Sbjct: 338 QNALIAITGYQDEESPGRKLLELTELPESERKIELNGKEYEVKCKVEKYGLSAHADRDSI 397 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVV 436 ++P+ +V HG + ++A++E + V +NG+M + + Sbjct: 398 LGFLAMLKPKTVVFAHGSEEAISQLSDMAIKEIESAVLIPQNGEMNTISIEKPRRQLSFF 457 Query: 437 HGLFLKDGFLIGKFADLGIA 456 +K I + I Sbjct: 458 ---NVKKLSNIEPLNEENIK 474 >gi|307265066|ref|ZP_07546626.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919864|gb|EFN50078.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] Length = 829 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 70/492 (14%), Positives = 150/492 (30%), Gaps = 77/492 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + L K I++DCG+ PD I + + AI Sbjct: 7 GGANEVGASCYLI----NLEGKNILLDCGIRMSSTKDN-----LPDFRLIQEHGG-VDAI 56 Query: 72 FITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL--------LEAKRVYERVSKKIPCIS 122 ++HAH DH GAL + +Y + L L+ + Sbjct: 57 IVSHAHLDHTGALPIISRMYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHV 116 Query: 123 FQAGDK-------VDVGAFSIESVRVN----HSIPETMALVIRSPVGNIVHTGDWKLDDD 171 D+ F ++V I ++ I S G++ ++GD+ Sbjct: 117 KDMLDRALCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSEEGSVFYSGDFSGFRQ 176 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGCVL 229 + I + +ST + + E + + + I+ G V+ Sbjct: 177 NTIEGAF-------IPKLRPDVAIFESTYGDKLHANRELEETRLIEKVSSIINEG-GKVI 228 Query: 230 VTTFSSSVSRIRSIIDIAEQI-------------------GRKIVLLGSSLKRVVSVAID 270 + F+ + R + II I ++ R L + L++ ++ I Sbjct: 229 IPAFA--LGRAQEIILILKKAINKGILKTKVYVDGMVREVCRVYKLNPNYLRQNLAKKIF 286 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--KLAEKDTV 328 G + E + S+ ++ G + KLA+ + Sbjct: 287 KGNDIFFDDNVIAVEKPEMREEIIKESCV-----ILSSSGMITGGPSQWYVEKLAQDEKN 341 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV---------SGHPYPNDLKRM 379 + + E + + + E + + + + S H ++ + Sbjct: 342 LIAITGYQDEESPGRRLLDIMEESPENRKIKIDDKEILIKCSIDKFGLSAHADMGEILAL 401 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGL 439 + P+ + +HG+P + + ++ + V NG + + E Sbjct: 402 ANSLYPKKIFLVHGDPEIINFLGKEVQKDLKSEVYIPSNGDIYEIDIKNPRKQIEKQPYP 461 Query: 440 FLKDGFLIGKFA 451 + + + Sbjct: 462 SMNQNCALTQEN 473 >gi|71005902|ref|XP_757617.1| hypothetical protein UM01470.1 [Ustilago maydis 521] gi|74703664|sp|Q4PEJ3|YSH1_USTMA RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|46097110|gb|EAK82343.1| hypothetical protein UM01470.1 [Ustilago maydis 521] Length = 880 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 82/271 (30%), Gaps = 42/271 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++L LG E+G + + Y K I+ D GV G+ P I + Sbjct: 21 DDQLTIEMLGAGQEVGRSCCVLKY----RGKTIVCDTGV---HPAFTGI-AALPFIDELD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLE----------- 106 + AI ITH H DH AL + + VY + + Sbjct: 73 --WSTVDAILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRISN 130 Query: 107 -----AKRVYERVSKKIPCI--SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + I D G S H + +I Sbjct: 131 AGNDDNLFDENEMLASWRQIEAVDFHQDVSIAGGLRFTSYHAGH-VLGACMFLIEIAGLR 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD+ ++D L I L+C+ST + +K + Sbjct: 190 ILYTGDFSREEDRHLVQ-------AEIPPVKPDVLICESTYGTQTHEPRLDKE-HRFTSQ 241 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I K V + R + ++ + ++ Sbjct: 242 IHHIIKRGGRVLLPVFVLGRAQELLLLLDEY 272 >gi|254565077|ref|XP_002489649.1| Putative endoribonuclease [Pichia pastoris GS115] gi|238029445|emb|CAY67368.1| Putative endoribonuclease [Pichia pastoris GS115] Length = 784 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 60/485 (12%), Positives = 135/485 (27%), Gaps = 77/485 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LGG E+G + + + K +M+D GV + P Sbjct: 14 DQFRFFCLGGGNEVGRSSHIIQF----KGKTVMLDAGVHPAFQGM----ASLPFYD--EF 63 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYE--------- 112 + + + I+H H DH +L + + V+ + + Sbjct: 64 DLGTVDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLNDFVRVTAIDDD 123 Query: 113 --------RVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + I +++ + + H + I ++ T Sbjct: 124 SNQLYSDKDLKDSFDRIETIDFHSTIEIDGIRFTAYQAGH-VLGAAMFFIEIAGIKVLFT 182 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ ++D L + + L+ +ST EK KK I Sbjct: 183 GDFSREEDRHLS-------VAEVPPVRPDVLITESTFGTATHEPREEKE-KKLTTMIHST 234 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGIIK 275 V ++ R + ++ I ++ K+ ++ ++V + Sbjct: 235 LANGGRVLMPVFALGRAQELLLILDEYWSQHQDLENIKVYYASDLARKCLAVYQTYINMM 294 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 + + P + + + L++ + V + SR Sbjct: 295 NENIRKKFRDTNKNPFQFQYI-------KNIKNLSKFDDFQPSVVVASPGMLQNGVSRAL 347 Query: 334 -----AIPGNEVAIGHI------KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 P N + + I V + + + H + + Sbjct: 348 LEKWAPDPRNTLIMTEILLEPTEIPSQQNPDVLIPRRMTVEEISFAAHVDYEQNSKFIEL 407 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLK 442 + P+ +V +HGE G + + PD +++ + L Sbjct: 408 VNPKTIVLVHGES----------NPMGRLKSALLSKYSKYKNTPDEVKVYNPRNCEDLLV 457 Query: 443 DGFLI 447 + I Sbjct: 458 EFKGI 462 >gi|52549651|gb|AAU83500.1| conserved hypothetical protein [uncultured archaeon GZfos29E12] Length = 549 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 76/454 (16%), Positives = 141/454 (31%), Gaps = 94/454 (20%) Query: 45 KDDLPGVDLVFPDITFIMKE-RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 ++ V + +I R + I ++HAH DH G + L +P+Y S Sbjct: 95 DSEMLKVPGLVTYEDYIQMHGRSYIDGILLSHAHMDHTGDIGFL--HHAIPLYCSEATRT 152 Query: 104 L--------------LEAK----------------RVYERVSKKIPCISFQAGDKVDVGA 133 L + +K ++ + C G+ ++G Sbjct: 153 LVAAIDAVTNFKSNAIRSKGSSIAFNKTGALAGCPKIVHKDELVRNCKVMADGEVTEIGP 212 Query: 134 FSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 F + + V+HS+P + V+ V I++TGD + T D Sbjct: 213 FQVTMIAVDHSVPGAASYVLACDVNGKPFKILYTGDIRFQGT----RGTTIDDYVRAVGT 268 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 GI ++C+ T + ++E+ ++ I + G VLV +R +I + A+ Sbjct: 269 GIDIMICEGTRIES-DSSLTEEKVRAKIASEIAETDGLVLVDFSWKDTTRYETINEAAKS 327 Query: 250 IGRKIVLLGSSLKRVVSVAID-----------------------VGIIKKDQLFLSDESF 286 GR V+ + + + + +++ Sbjct: 328 CGRTFVINARLAYVLNKLGQTPLPESVKVFLKRKASCFYSPADYAQYKHEYGFSIDKDTW 387 Query: 287 GLY--PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG------- 337 + +V L + LA+++ I SR I Sbjct: 388 TQDSSHYDNGLVADELKSNPSDYVLMLSYYDLGQLFDLADENGKILGSRYIRAQCEPFSD 447 Query: 338 -NEVAIGHIKNRLVEQGV-------RVIAEDAEC----------PVHVSGHPYPNDLKRM 379 E+ + N L G+ V HVSGH +LK + Sbjct: 448 EMELDEERLINWLDAFGIGYELGETPVPDGCTNPNCTKLRKRIVRSHVSGHASRPELKEL 507 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 I P++L +H E EL + I + Sbjct: 508 IGKINPELLFPVHTERP--EVFAELVKGKDIEVI 539 >gi|45358257|ref|NP_987814.1| beta-lactamase-like protein [Methanococcus maripaludis S2] gi|44921014|emb|CAF30250.1| Beta-lactamase-like:KH domain [Methanococcus maripaludis S2] Length = 635 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 135/442 (30%), Gaps = 64/442 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + I++DCG++ +D + FP Sbjct: 177 DSWVRTSFLGGSREVGRTCL----YHQTPESRILVDCGINIAVED----EKAFPHFDAPE 228 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-RVSKKIPC 120 + + A+ +THAH DH G + L+ + PVY + L+ + +++K Sbjct: 229 FSIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGK 288 Query: 121 ISFQAGDKV--DVGAFSIESVRVNHSIPET------MALVIRSPVGNIVHTGDWKLDDDA 172 + + + V I A I H GD + Sbjct: 289 NVPYSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAY 348 Query: 173 ILGDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 + L + L+ +ST + +K ++ KG Sbjct: 349 TGDIKFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKR 263 ++ F + R + ++ + E+ + L G +++ Sbjct: 409 KAIIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRN 466 Query: 264 VVSVAIDVGII---------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + D + D+ + D +++ G E LA + Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADDEK 526 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V + T+ R I I + + V+V SGH Sbjct: 527 NSIVFVGYQSEGTLG---RKIQKGFKEIPLMGKNGRSKAVKVNLS-VHTLEGFSGHSDRK 582 Query: 375 DLKRMYQWIR--PQVLVAIHGE 394 L + + ++ P ++ +HGE Sbjct: 583 QLIKYLRKLKPIPDRILTVHGE 604 >gi|302806483|ref|XP_002984991.1| hypothetical protein SELMODRAFT_234671 [Selaginella moellendorffii] gi|302825687|ref|XP_002994439.1| hypothetical protein SELMODRAFT_236963 [Selaginella moellendorffii] gi|300137630|gb|EFJ04498.1| hypothetical protein SELMODRAFT_236963 [Selaginella moellendorffii] gi|300147201|gb|EFJ13866.1| hypothetical protein SELMODRAFT_234671 [Selaginella moellendorffii] Length = 677 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 69/466 (14%), Positives = 139/466 (29%), Gaps = 75/466 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ +PLG E+G + Y K I+ DCG+ + P I Sbjct: 14 EKMEIMPLGAGSEVGRSCCHMTY----KGKTILFDCGIHPGYTGM----AALPYFDEID- 64 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 65 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKISKGSVE 123 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + V K + I ++V H + ++ +++TG Sbjct: 124 DMLYDEQDVLKTMDKIEVIDFHQTMEVNGIRFWCYTAGH-VLGAAMFMVDIAGIRVLYTG 182 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST ++ + EK + I + Sbjct: 183 DYSREEDRHL-------KAAEMPEFSPDVCIIESTYGVQIHQPRHVREKRFTETIAQTVS 235 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLLGSSLKRV 264 + G VL+ F+ + R + ++ I ++ +K + + + Sbjct: 236 HG-GRVLIPAFA--LGRAQELLLILDEYWEAHPELQHIPIYYASPLAKKCMAVYQTYINS 292 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 ++ I + S + V + P + LSR Sbjct: 293 MNDKIKSQYENSNPFNFKHISPLKSIEQFEDVGPSIVMASPSGLQSGLSRQLFDRWCQDR 352 Query: 325 KDTVIFSSRAIPG-------NE-VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K+ + + G NE + + +V +RV+ + S H Sbjct: 353 KNACVIPGYVVEGTLAKTILNEPKEVALVSGLVVPLNMRVVY------ISFSAHADFAQT 406 Query: 377 KRMYQWIRPQVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGKM 421 +RP +V +HGE + K +L Q V Sbjct: 407 SAFLGELRPPHIVLVHGEQNEMGRLKVKLQAQFAEQNVKINSPKNC 452 >gi|159904583|ref|YP_001548245.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159886076|gb|ABX01013.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 635 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 135/442 (30%), Gaps = 64/442 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + I++DCG++ +D + FP Sbjct: 177 DSWIRTSFLGGSREVGRTCL----YHQTPESRILVDCGINIAVED----EKAFPHFDAPE 228 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-RVSKKIPC 120 + + A+ +THAH DH G + L+ + PVY + L+ + +++K Sbjct: 229 FSIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGK 288 Query: 121 ISFQAGDKV--DVGAFSIESVRVNHSIPET------MALVIRSPVGNIVHTGDWKLDDDA 172 + + + V I A I H GD + Sbjct: 289 NVPYSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYNVAY 348 Query: 173 ILGDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 + L + L+ +ST + +K ++ KG Sbjct: 349 TGDIKFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKR 263 ++ F + R + ++ + E+ + L G +++ Sbjct: 409 KAIIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRN 466 Query: 264 VVSVAIDVGII---------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + D + D+ + D +++ G E LA + Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIIDSDEPGIILTTSGMLSGGPSVEYFKNLADDEK 526 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V + T+ R I I + + V+V SGH Sbjct: 527 NAIVFVGYQSEGTLG---RKIQKGFKEIPLMGKNGRSKAVKVNLS-VHTLEGFSGHSDRK 582 Query: 375 DLKRMYQWIR--PQVLVAIHGE 394 L + + ++ P ++ +HGE Sbjct: 583 QLIKYLRKLKPIPDRILTVHGE 604 >gi|150403634|ref|YP_001330928.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150034664|gb|ABR66777.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 635 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 135/442 (30%), Gaps = 64/442 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + LGG E+G + I++DCG++ +D + FP Sbjct: 177 DSWIRTSFLGGSREVGRTCL----YHQTPESRILVDCGINIAVED----EKAFPHFDAPE 228 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-RVSKKIPC 120 + + A+ +THAH DH G + L+ + PVY + L+ + +++K Sbjct: 229 FSIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGK 288 Query: 121 ISFQAGDKV--DVGAFSIESVRVNHSIPET------MALVIRSPVGNIVHTGDWKLDDDA 172 + + + V I A I H GD + Sbjct: 289 NVPYSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYNVAY 348 Query: 173 ILGDVTDKDSLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 + L + L+ +ST + +K ++ KG Sbjct: 349 TGDIKFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIARKG 408 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKR 263 ++ F + R + ++ + E+ + L G +++ Sbjct: 409 KAIIPVFG--IGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRN 466 Query: 264 VVSVAIDVGII---------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + D + D+ + D +++ G E LA + Sbjct: 467 RIFHEGDNPFLSEVFKKVKNTNDRRNIIDSDEPGIILTTSGMLSGGPSVEYFKNLADDEK 526 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V + T+ R I I + + V+V SGH Sbjct: 527 NAIVFVGYQSEGTLG---RKIQKGFKEIPLMGKNGRSKAVKVNLS-VHTLEGFSGHSDRK 582 Query: 375 DLKRMYQWIR--PQVLVAIHGE 394 L + + ++ P ++ +HGE Sbjct: 583 QLIKYLRKLKPIPDRILTVHGE 604 >gi|332712233|ref|ZP_08432161.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Lyngbya majuscula 3L] gi|332349039|gb|EGJ28651.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Lyngbya majuscula 3L] Length = 867 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 66/467 (14%), Positives = 146/467 (31%), Gaps = 68/467 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L+ PLG IG + G +++DCG D P + ++ Sbjct: 277 DRLIVTPLGAARSIGASCFKILIGPYE----VVLDCGTRPKGYDPL------PALDYL-- 324 Query: 64 ERKNLMAIFITHAHEDHYGALH-DLWSFLHVPVYASPFAIGLLEAKRV------------ 110 N + I+H+H+DH GA+ + + ++ + Sbjct: 325 --DNPNLLLISHSHQDHLGAVPVFHSRYPGARMISTHGTREIAHVMLRDGLKIQQLNEDS 382 Query: 111 -----YERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + + + Q D + + + H I + +R ++++T Sbjct: 383 PELFDEADLEQTLFQLETQPVGKDFEPLPGLMVRFINAGH-ILGAACIYLRYKDMSLLYT 441 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ + T+ +L + IL +++ E + ++I ++++ Sbjct: 442 GDFHTTNS----RTTNGLNLAELPEADILITESTYGSSVHPARRNQETALMESIAEVVQ- 496 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGR------KIVLLG--SSL-------------- 261 A G VL+ +F+ + R + I+ I + G ++ Sbjct: 497 AGGNVLIPSFA--LGRAQEILLGIRTSKLFNKLTVPIFVDGLVRAVTEVFRENLDLLPVP 554 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + S + + + L +V Sbjct: 555 VQNLVKINGQEPFFDKTSTPPIISIEHFRERPIAIAKPSVIVASSGMLTGGPSVYYASVL 614 Query: 322 LAEKDTVIFSS----RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 L ++ IF S PG + + + G + + ++S H L Sbjct: 615 LERENAAIFISGYTDEESPGRLLQSLKTGDTIELDGKPITVKAQIKRFNLSAHTDKVGLG 674 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 ++ ++P+ LV IHGE L + + + G + L Sbjct: 675 QVINKVKPKHLVLIHGELEALHQVARSGDNQSLFYIHIPAVGDKIEL 721 >gi|154150928|ref|YP_001404546.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999480|gb|ABS55903.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 639 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 77/478 (16%), Positives = 153/478 (32%), Gaps = 79/478 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LG E+G L + ++IDCG P + L P+I + Sbjct: 185 KDQWVRVTTLGCCREVGRAAFLL----TTPDSRVLIDCGEK-PDNAGGTPYLYVPEIHPL 239 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYE 112 + L A+ +THAH DH + L+ + PVY++P L L+ + Sbjct: 240 AQ----LDAVVLTHAHLDHCALIPLLYKYGYEGPVYSTPPTRDLSAMLQLDYLDVINKED 295 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ G D+ + H + +A I + NI Sbjct: 296 RKIPYSSNEVKTYIRHSITLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHIGDGLYNIA 355 Query: 162 HTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+ + + L A+ E +N + +E + + I + Sbjct: 356 FTGDFNYSKSRLFNPAINQFPRLEALFMESTY----GGSNDFQPARSDAELKLYETINKV 411 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 + G V++ F+ V R + ++ E+ G L ++ V I + + ++ Sbjct: 412 LSRG-GKVIIPAFA--VGRSQEVMLALEE--------GMRLGKIPHVKIYLDGMIREATA 460 Query: 281 LSDESFGLYPRE-QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 + + + ++ G Q+ E+R + VI S+ + Sbjct: 461 IHTTYPEYLNNDLRNLIFREGMNPFLAECFQQVDSSELREKVINGDPCVIISTSGMLNGG 520 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECP-------------------------------VHVS 368 + ++ N ++ ++ + S Sbjct: 521 PVMEYLLNLAEDEKNALVFVGYQADGTQGRRIQKGWREVPLGRKGTITINLEIDTIDGFS 580 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 GH L I RP+ + IHG+ + + + N + R+ Sbjct: 581 GHSDRRQLMNYIGQIQPRPEKIFCIHGDENNTIDLASSIYKRYHIQTHSPMNLETYRM 638 >gi|300363001|ref|ZP_07059171.1| RNA-metabolising metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] gi|300353051|gb|EFJ68929.1| RNA-metabolising metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] Length = 433 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 143/443 (32%), Gaps = 72/443 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPG 50 + G+ IG M Y + ++ D G + +D L Sbjct: 3 SKPKTKVTFYNGLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDEDFATLLK 58 Query: 51 VDLV--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L+ PD K + A +I+H H DH A++ L +P+YA P Sbjct: 59 YQLIGDVPDFYDPKVTGKEIDHERWEHSAAYISHLHLDHSKAMNLLAPE--IPLYAGPLT 116 Query: 102 IGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 LL + + P I+ + + + VG ++ V +H L+ Sbjct: 117 AALLPVLNRDGEFLLPAADKPKNYTRPIIAAKLNEPIHVGDITLTVVPSDHDAYGATGLI 176 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 +++P IVHTGD + + G D +G L+ + T + Sbjct: 177 VKTPDKTIVHTGDIR-----LHGYHPDWVRKFMAAGKGCDMLIIEGTGVSWPDRSEDDSE 231 Query: 213 IKKNIYDIMKNAKGCV-----------LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-- 259 K + + ++ K V T+ ++V RI II RK+VL Sbjct: 232 EFKGVKNEIELTKRIVQYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRA 288 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 L ++ + + L + + Q+ + Sbjct: 289 ELLKLALKQDVPYYYLPEDKKIDALDP------DLKISYQDLLKDDHQYFWQVVGHYDQ- 341 Query: 320 VKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 L + I S + + + A + ++G+ +I + SGH +LK Sbjct: 342 --LQQGGLYIHSNAEPLGDFDPAYAPFIENIEKRGIELIT------LRCSGHADVAELKE 393 Query: 379 MYQWIRPQVLVAIHGEPLHLVAH 401 + P++L +H L + Sbjct: 394 IIAGFEPKILAPVHTLHPELEEN 416 >gi|297739590|emb|CBI29772.3| unnamed protein product [Vitis vinifera] Length = 680 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 87/268 (32%), Gaps = 42/268 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + Y K I+ DCG+ + P I Sbjct: 22 DQLIITPLGAGNEVGRSCVYMSY----KGKTILFDCGIHPAYSGM----AALPYFDEID- 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 73 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 131 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 132 DMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 190 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST ++ + EK I+ + Sbjct: 191 DYSREEDRHL-------RAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTIS 243 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + ++ I ++ Sbjct: 244 QG-GRVLIPAFA--LGRAQELLLILDEY 268 >gi|330834491|ref|YP_004409219.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329566630|gb|AEB94735.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 425 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 120/345 (34%), Gaps = 43/345 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ E LGG E+G G +S + +++D GV+F + D P+ Sbjct: 2 LREMEYSIKILGGGNEVGR----AGIEVSNSNESVILDYGVNFNQKDE-------PNFP- 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALH-DLWSFLHVPVYASPFAIGLLEAKRVY-------- 111 + + + ++HAH DH GAL S P+Y + + + E Sbjct: 50 LQEVPSKVSGFVVSHAHLDHVGALPIYQISSTK-PIYGTGISKYITELMLKDFIKLSGPK 108 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 E +F +++++G+FS+ + H IP + V+++ G++ +TGD Sbjct: 109 VPYEWVEVKKSMDNFKTFNYKEEIEIGSFSVTTSSAGH-IPGSAITVVKTEKGDVAYTGD 167 Query: 166 WKLDDDAILGDVTDKDSLCAIG-NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 + + + ++ ++T + + +++ Sbjct: 168 INVA-------MAKLVKPAELDIMRKSKVIITEATYGKFNHP-ARKNVEDEFYTSVIETL 219 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 +G + + S+SR + I+ + + + L R + + I+ + +++D+ Sbjct: 220 EGGGTILVPAFSLSRSQEILSVLAERNIPYPVYYDGLARTI-----MEIMIDNSQYINDK 274 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 E+ + + +K Sbjct: 275 EALRKAYEEFTYVRGWEDRRKAYKSNGVIVASAGMLKGGPAVYYF 319 >gi|73956497|ref|XP_856119.1| PREDICTED: similar to related to CPSF subunits 68 kDa isoform 1 isoform 4 [Canis familiaris] Length = 398 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 13/115 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ PLG ++G + L + +M+DCG+ +D D FPD ++I + Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITRN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV 114 L + I+H H DH GAL P+Y + + R Sbjct: 55 GRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRK 109 >gi|325300621|ref|YP_004260538.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320174|gb|ADY38065.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 418 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 80/419 (19%), Positives = 149/419 (35%), Gaps = 44/419 (10%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + G+ I+ID G + P + +D D+ + + AIF Sbjct: 8 GAHQIGGCITEIKSGNAK----ILIDLGANLPDSEEKELDAS--DVARLTNDAD---AIF 58 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKRVYERVSKKIPCIS----FQ 124 TH H DH G L ++P Y A ++ A ++ SK++ I + Sbjct: 59 YTHYHGDHVGLFP-LVPE-NIPQYIGKGAQEVMLCKYRALNKHQDRSKELIAIERFHLYT 116 Query: 125 AGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +D+ G + V+HS + I + I+HTGD++ + ++ + Sbjct: 117 PNVPIDIKGQIRVTPYYVSHSAFDAYMFKIEAEGKTILHTGDFRR-HGYLGKELF---KV 172 Query: 184 CAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + L+ + T R E + E IK N ++K K V S+ + R+ S Sbjct: 173 LCTYINNVDFLIIEGTMLGRKEEKVVRENDIKLNTVSLLKKHK-YVFALCSSTDIDRLAS 231 Query: 243 IIDIAEQIGRKIVLLG--SSLKRVVSVAIDVGIIKKDQLFLSDES-------FGLYPREQ 293 ++ R + S+ + S + G+ D F+ E Sbjct: 232 FHQACKETHRNFLCDPYQKSVLDIFSRYMRHGLFHFDNAFVMYRQQVANPKVMAKLRNEG 291 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIG-HIKNRLVEQ 352 ++ SQ E L + E + + G E + I Sbjct: 292 FLMPVRVSQMEFIKNLLAIYNDEPAYLIYSLWQGYY------NGTEKQVNPKIVELRSLF 345 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLVAHKELALQEGI 410 ++ + H SGH L+ + +RP++ ++ IH E L ++A + + Sbjct: 346 PGHILDGVYDG-FHTSGHADVETLEEACRILRPRLGIIPIHKEALSSYKALDIAKEFPV 403 >gi|254563687|ref|YP_003070782.1| metallo-beta-lactamase family protein [Methylobacterium extorquens DM4] gi|254270965|emb|CAX26970.1| putative metallo-beta-lactamase family protein [Methylobacterium extorquens DM4] Length = 416 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 126/345 (36%), Gaps = 28/345 (8%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQA 125 +L+A+ ++H H DH G L L +PV + +L A + S ++F Sbjct: 55 DLLALVLSHGHRDHVG-LSHLAG-PDLPVAMGAATLRILWAAAAFVPDSYVPTNTVTFTD 112 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G + G F++ + V+HS + AL++ + ++++GD + + L Sbjct: 113 GQALRFGPFTVTPILVDHSAYDAYALLVEAGQQRLLYSGDLRA----HGRKGALFERLVR 168 Query: 186 IGNEGILALMCDSTNAMREGT---CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 GI L+ + ++ R +E I+ + + +G LVT + ++ R+ S Sbjct: 169 DPPRGIDTLLLEGSSLGRLDDDRTFPTEADIEDRFVGLFADTEGMALVTASAQNIDRVVS 228 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + ++ GR +VL + + V G + Q S + +++ + TG Sbjct: 229 LYRACKRAGRTLVLDLYAAE----VLAATGNPRIPQSDWPGVSVFVPRHQRVRIKRTGRF 284 Query: 303 GEPRSALAQLSRGE--------------MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 A GE + ++ + +RAI Sbjct: 285 DLIERHRANRIYGEQLAALAPRAALLFRHSLLPDLDRADCLSGARAIWSQWAGYLGQPRG 344 Query: 349 LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 H SGH DLKR+ I P+ LV +H Sbjct: 345 QALVTDLATRAIPLSHAHTSGHASIPDLKRLAAAIAPRQLVPVHT 389 >gi|268323513|emb|CBH37101.1| putative RNA-metabolising metallo-beta-lactamase [uncultured archaeon] Length = 417 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 80/432 (18%), Positives = 145/432 (33%), Gaps = 73/432 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG E+G + L +++D G+ P V L +I+ Sbjct: 1 MKLKF--LGGCNEVGRSAILV-------DDKVLLDYGMRPSDP--PEVPLNNGNIS---- 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGL--------LE-------A 107 A+ ++HAH DH G + L VP VY + L ++ A Sbjct: 46 ----PEAVIVSHAHLDHSGMVPSLM----VPKVYMTSVTRDLTILLGRDTIKVGKDQGFA 97 Query: 108 KRVYERVSK-KIPCISFQAGDKVDVG--AFSIESVRVNHSIPETMALVIRS--PVGNIVH 162 E + K + G++V + + E H IP + A +R ++ + Sbjct: 98 FFDEEDIRKMDEHTRTVAYGERVALNGSDYEFELYNAGH-IPGSSATYLRKASEDISLFY 156 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD ++D+ ++ + IL L N G E +I + + Sbjct: 157 TGDIRMDETRLMKS----AAPSEFPASDILLLESTYYNKEHRGRQEMEHEFIDSIKETLA 212 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK---------RVVSVAIDVGI 273 + G V+V F+ V R + ++ I G + G L + A + Sbjct: 213 -SGGNVIVPCFA--VGRTQEVVMILHSYGITPYVDGMGLGVFRLFKNHPSFLKNAKALND 269 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + F++ E +++ T L L + + K V+ + Sbjct: 270 AFNNAQFVNMTRRKNIFSEPSVIVTTAGMLNGGPVLYYL-----KKIHKDPKSKVLLTGY 324 Query: 334 AIPGNEVAIGHIKNR--LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI---RPQVL 388 I G + + G V + S H ++LK + +V+ Sbjct: 325 QIEG--TNGRRLIENGHVEVDGKVVKVSASVEQYDFSAHAGDSELKDLVSRFCKNGTEVV 382 Query: 389 VAIHGEPLHLVA 400 +HGE + A Sbjct: 383 FMVHGEHTNEFA 394 >gi|161529235|ref|YP_001583061.1| beta-lactamase domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340536|gb|ABX13623.1| beta-lactamase domain protein [Nitrosopumilus maritimus SCM1] Length = 646 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 81/467 (17%), Positives = 149/467 (31%), Gaps = 70/467 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ LGG G++G + L + I+IDCG++ P P +D FP + + Sbjct: 188 EVSLYTLGGFGQVGRSSLLL----STPESKILIDCGIN-PGARSP-MDA-FPRLDSLNLT 240 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----AKRVYERVSKKIP 119 +L A+ I HAH DH G L L + P+Y + + ++ + P Sbjct: 241 LDDLDAVVIGHAHLDHTGFLPTLCKYGYKGPIYCTEPTLPMMNLIQLDAIKVAAAQGRTP 300 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 S + ++ ++ V P+ A I H G+ D + + Sbjct: 301 IYSERDVKQIMRQTITLPYGTVTDISPDIKLVLANAGHILGSALCHFHIGN--GDHNFVY 358 Query: 175 GDVTDKDS-----LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 + + L+ +ST ++E S + ++ + + N G Sbjct: 359 SGDIKFGKSILFEAASWNFPRVETLLIESTYGLKEDIQPSRQEVESAFINAVNNTLADGG 418 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ------------------------IGRKIVLLGSSLK 262 VL+ +V R + I+ + + L LK Sbjct: 419 KVLI--PIPAVGRAQEIMMVIDHYMKSGEMIEAPVFTEGMISEASAIHESYPEYLARELK 476 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATGSQGEPRSALAQLSRGEMRN 319 + + D + + P + I++AT E L +N Sbjct: 477 QKILETDDNPFDSEYFTNIEHADAREEPMREDSPCIILATSGMLEGGPVL-----EYFKN 531 Query: 320 VKLAEKDTVIFSSRAIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + +K V+F S + G + + + V I E SGH Sbjct: 532 IAPDKKSKVLFVSYQVNGTLGRRVLDGSKQATMLGKDGKVEVVTINCGVEKLDGFSGHSD 591 Query: 373 PNDLKRMYQWIRPQV--LVAIHGEPLHLVAHKELALQEGIACVPPVR 417 N L Q +RP++ ++ HGE + + Sbjct: 592 YNQLMSFVQRLRPKLRRVLVNHGERKKSENLAMNIRRMHRVPAHYPQ 638 >gi|54298302|ref|YP_124671.1| hypothetical protein lpp2360 [Legionella pneumophila str. Paris] gi|53752087|emb|CAH13513.1| hypothetical protein lpp2360 [Legionella pneumophila str. Paris] Length = 470 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 79/450 (17%), Positives = 130/450 (28%), Gaps = 75/450 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ LG + + L GS K I+IDCG+ F +L + Sbjct: 13 LNGGKMKLTFLGATETVTGSKYLLTIGS----KKILIDCGL-FQGYK----ELRLRNWAP 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VY 111 + + ++ A+ ITHAH DH G L L +Y +P L Sbjct: 64 LPIDPHDIDAVIITHAHIDHSGYLPLLVKNGFQGKIYTTPGTKALCSILLPDSGHLQEEE 123 Query: 112 ERVSKKIPCISFQA-----------------------GDKVDVGAFSIESVRVNHSIPET 148 R++ K Q FS E R H I Sbjct: 124 ARLANKYGFSKHQPALPLYTEKEAHTALQYFETIDFDTPHQLFHDFSFEYHRAGH-IVGA 182 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + I++ G+IV TGD D + L+ +ST R Sbjct: 183 AMVKIKTQKGSIVFTGDIG--------RPYDPVMKAPAFIQETDYLVMESTYGDRLHDAT 234 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-----KR 263 + + G V++ F+ V R +S++ ++ R+ + L Sbjct: 235 DPLPQMAQVINQTVKRGGSVVIPAFA--VGRAQSLLYFIYELKRQ-GQIPKDLPVFLDSP 291 Query: 264 VVSVAIDVGIIKKDQLFLSDESFG---------LYPREQLIVIATGSQGEPRSA--LAQL 312 + A + K+ L+ E P E + +A +AQ Sbjct: 292 MAIDATHLLCTYKEDHHLTAEQCRGLCHVATYVNTPEESKEIDRHHMPQIIIAASGMAQG 351 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----S 368 R A I N + + + V V S Sbjct: 352 GRILHHLKAFAPNPKNTLLFTGFQAGGTRGARIVNGEKQVKIHGSFIPIQAKVVVMSSTS 411 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H +L + P+ + HGEP Sbjct: 412 AHADYPELLEWLTHLTNPPKKVFITHGEPH 441 >gi|305663939|ref|YP_003860227.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] gi|304378508|gb|ADM28347.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] Length = 424 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 108/298 (36%), Gaps = 39/298 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+G A + +++D GVSF ++D P +FP + Sbjct: 3 IEITVLGAGREVGR--AAIHVKNLKDESAVLLDYGVSFDEEDRP----LFP----LAVSP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISFQ 124 L A+ +THAH DH GA+ L+ + S L + ++S + Sbjct: 53 SKLKAVLVTHAHLDHVGAVPFLYISARPLLIMSRLTAKLSKLMIEDMIKISGYFLPYEYP 112 Query: 125 A-------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 G+ +++ IES+ H IP ++ I +I++TGD Sbjct: 113 ELIAMLENVKPIEIGETLEIDNIRIESINAGH-IPGSIMFKITMGEKSILYTGDINT--- 168 Query: 172 AILGDVTDKDSLCAIGNEGILA--LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 D + + + I A L+ +ST + + S + + I + + Sbjct: 169 ------IDTRLIKGLKPQNIDADILIIESTYGLYDHPERS-RVEELFIDTVKSVIEDGGN 221 Query: 230 VTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V + S+ R + I+ + + + G + + + + I + L L Sbjct: 222 VLVPAFSLGRAQEILTLLIERLPNANVYYDGMAKEILNILLEHREYINRYDLLLKVYE 279 >gi|288931234|ref|YP_003435294.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM 10642] gi|288893482|gb|ADC65019.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM 10642] Length = 407 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 124/400 (31%), Gaps = 58/400 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG E+G + + I++D G+ +D + P Sbjct: 2 VAIKFLGGCREVGRSAIMV--------DSIILDYGLKPSDPPEFPLDGIAP--------- 44 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIPCI 121 ++ ++H H DH G +L VY +P LL+ Sbjct: 45 ---KSLILSHGHLDHVGVAPNLM-DYDPLVYMTPPTSDLSSILLKDSLNIMENPPYTKRQ 100 Query: 122 SFQ---------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 Q + + + I H IP + ++ + +I++TGD +L+D Sbjct: 101 LRQFESNTRFIGYDEPFHIDGWEITLFNAGH-IPGSASIYM-ERDVSILYTGDIRLEDTR 158 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 +L I L+ +ST E E K + + + Sbjct: 159 LLEG-------ADTSYPEIDVLIVESTYFGVEHPDRRELE-KAFVESVKETLDNGGFAII 210 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLG------SSLKR---VVSVAIDVGIIKKDQLFLSD 283 + +V R + + I + G + G L+R + A ++ K + + Sbjct: 211 PAFAVGRTQEVAMILVKHGITPYVDGMGNEVARILERYPEYIKSAKELKKTMKKVIPVEK 270 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIG 343 +E ++ T AL +S+ + + +I + + G Sbjct: 271 GKREEILKEPAAIVTTAGMLNGGPALFYISK-----LYNDSRSKIILTGYQVEGTNGDKA 325 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 K + V + S H + LK + + I Sbjct: 326 LKKGEIDLGMKTVKLKMKVEQYDFSAHADDSQLKELVKRI 365 >gi|46200035|ref|YP_005702.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Thermus thermophilus HB27] gi|46197663|gb|AAS82075.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Thermus thermophilus HB27] Length = 431 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATALLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|312127068|ref|YP_003991942.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] gi|311777087|gb|ADQ06573.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] Length = 822 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 97/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L + + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKACNKN----ILIDSGIRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + + YA+ L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPQIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ + I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFSAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNA 224 D + ++ ++C+ST R T S E+ + + +++ Sbjct: 169 SADKQLTVDK-------ASVPKIRPDIVICESTYGDRLHTNRSFEEERLFNTVAEVISQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + II I Sbjct: 222 -GKVLIPAFA--IGRAQEIILILRNY 244 >gi|297619493|ref|YP_003707598.1| beta-lactamase domain-containing protein [Methanococcus voltae A3] gi|297378470|gb|ADI36625.1| beta-lactamase domain protein [Methanococcus voltae A3] Length = 422 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 63/436 (14%), Positives = 129/436 (29%), Gaps = 77/436 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + I++DCG+ + +P VD + A+ Sbjct: 8 GGCHQIGKSCVEIE----TKKSRILVDCGMDPSNNAIPDVD------------ASKIDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 ++HAH DH GA+ +Y + L+ K + Sbjct: 52 VVSHAHLDHCGAVPH----FDFKNIYCNAPTADLMYNVWKDTVNLSKSYKEEDIQRSMKN 107 Query: 131 VG------------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + S++ H I + ++ + +++TGD + L Sbjct: 108 INILGYREPKKITSDISMKFYDAGH-ILGSSSVYLDIDGKKLLYTGDINEIETRTLNP-- 164 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSS 235 + I ++ +ST S K ++K + D + G V++ F+ Sbjct: 165 -----ADTDIDEIDTIIIESTYGSPLDVKPSRKVLEKQLIDEISETIEENGKVIIPVFA- 218 Query: 236 SVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK----KD 277 V R + II I G G + + + + Sbjct: 219 -VGRAQEIIVIINNYIRSGLLKKVPVYVCGSLTHTTGMYMSYSEWLNPKINNLMNNGTNP 277 Query: 278 QLFLSDESFGLYPREQLIVIATGS----QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 L ++ + +I + S G L+ L + + + + Sbjct: 278 FGNLLKADDNIFNNNEPCIIISTSGMVQGGPVLQYLSLLKNPKNKLILTGYQGEGTIGRS 337 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIH 392 G + + + + S H N L R + I P+ + +H Sbjct: 338 LEEG--------ATEITPFKKPIQIKGKITKIEFSAHGDYNSLVRYLKKIPEPKKAIVMH 389 Query: 393 GEPLHLVAHKELALQE 408 GE ++ + Sbjct: 390 GERYQALSLAMTIWKM 405 >gi|297619164|ref|YP_003707269.1| KH-domain/beta-lactamase-domain-containing protein [Methanococcus voltae A3] gi|297378141|gb|ADI36296.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3] Length = 635 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 136/451 (30%), Gaps = 60/451 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG E+G + IMIDCG++ DD + FP Sbjct: 179 WIRTSFLGGSREVGRTCL----YHQTPESRIMIDCGINVGMDD----EKAFPHFDAPEFS 230 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----EAKRVYERVSKKIP 119 + + A+ +THAH DH G + L+ + PVY + L+ + K Sbjct: 231 IEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYIDIAEKEGKPV 290 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPE-----TMALVIRSPVGNIVHTGDWKLDDDAIL 174 + + ++ P A I H GD + Sbjct: 291 PYTSRDVKNAIKHTIPLDYGVTTDIAPAVKLTLHNAGHILGSAIAHCHIGDGLYNVAYTG 350 Query: 175 GDVTDKDSLCAIG---NEGILALMCDSTNAMR----EGTCISEKGIKKNIYDIMKNAKGC 227 + L + L+ +ST +EK + K I + + G Sbjct: 351 DIKFEASRLLEPAVCQFPRLETLIMESTYGGYDDVLPERDETEKELLKVISETIAKG-GK 409 Query: 228 VLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLLG-----------------SSLKRV 264 V++ F + R + ++ + E+ + L G +++ Sbjct: 410 VILPVFG--IGRAQELMLVLEEGYNQGIFNAPVFLDGMIWEATAIHTAYPEYLSKNMRNR 467 Query: 265 VSVAIDVGIIKKDQLFLSDES--FGLYPREQLIVIATGS----QGEPRSALAQLSRGEMR 318 + D + + + D + R++ +I S G L+ E Sbjct: 468 IFHEGDNPFLSEVFKKVKDTKDRRNVIGRDEPCIILATSGMLTGGPSVEYFKTLADDEKN 527 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + + R I I + + ++V SGH L + Sbjct: 528 AIVFVGYQSEGTLGRKIQKGWKEIPLMGKNGKTRAIKVKLS-VHTLEGFSGHCDRKQLIK 586 Query: 379 MYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + ++ P ++ IHGE + A + Sbjct: 587 YLRKLKPIPDKILTIHGEASKCIDLASTAYK 617 >gi|67479721|ref|XP_655242.1| cleavage and polyadenylation specificity factor 73 kDa subunit [Entamoeba histolytica HM-1:IMSS] gi|56472366|gb|EAL49856.1| cleavage and polyadenylation specificity factor 73 kDa subunit, putative [Entamoeba histolytica HM-1:IMSS] Length = 755 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 75/456 (16%), Positives = 141/456 (30%), Gaps = 60/456 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L PLG E+G + + Y + IM+DCGV P + P Sbjct: 16 INGNYLEIRPLGAGREVGRSCFILKYMGHN----IMLDCGV---HPAKPHGEAALPLFEH 68 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW--SFLHVPVYASPFAIGLLEAKRVYER----- 113 + ++ + +TH H DH +L L V +P + Sbjct: 69 --ADIDSIELLCVTHYHVDHCASLPYLILERQFKGKVLMTPPTKEIFGELFKEFHQMSST 126 Query: 114 VSKKIPCISFQAGDKVDVGAF---------SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + D++D F I H I I I++TG Sbjct: 127 IQPPKSVNPKEVIDRIDTIKFHELQEYNGMKIWCFNAGH-ILGAAMFCIEINGVKILYTG 185 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + D L + I +MC+ST + E ++ I I++ Sbjct: 186 DFSGETDRHLQA-------AEVPPFQIDVMMCESTYGIIEQESRIDREN-AFIRQIIEIL 237 Query: 225 KGCVLVTTFSSSVSRIRSI---IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K S+ R + ++ Q + + + S+ S+A + Sbjct: 238 KRGGKCLIPVFSLGRAQEFELILEEYWQNHKDLWSV--SIFFFSSIAKKCTTYFEKFTSF 295 Query: 282 SDESFGLYPRE--QLIVIATGS---------------QGEPRSALAQLSRGEMRNVKLAE 324 ++ ++ I GS P +SR + Sbjct: 296 MNQELRKKTKQAFDFKFIREGSSSVDDGAIDYKPCVVMASPGMLQDGISRKIFERWCTDK 355 Query: 325 KDTVIFSSRAIPGN---EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 K+ VI + G ++ + K + +G +V+ + + + H ++ Sbjct: 356 KNGVIIPGYCVEGTLAKDLILDSTKPFINSEGDQVVPKCSVTEISFCAHSDFAHTRKFIG 415 Query: 382 WIRPQVLVAIHGE-PLHLVAHKELALQEGIACVPPV 416 ++P+ LV IHGE H L + + Sbjct: 416 NVKPKHLVLIHGEGKSMEQLHNALKKEYPELNIYMP 451 >gi|219851430|ref|YP_002465862.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219545689|gb|ACL16139.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 630 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 94/269 (34%), Gaps = 46/269 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITF 60 K++ + LG E+G L + ++IDCG P ++ G + P+I Sbjct: 175 KDQWVRVTTLGCCREVGRAAFLL----STPESKVLIDCGEK-PDNNNNGTPYLYVPEIHP 229 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVY 111 + L A+ +THAH DH + L+ + PVY++P L LE R Sbjct: 230 L----SQLDAVVLTHAHLDHCALIPLLYKYGYEGPVYSTPPTRDLASMLQLDYLEVIRKE 285 Query: 112 ERVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV--GN 159 ++ I G D+ + H I + N Sbjct: 286 DKKIPYTSADVKSYLKHSIVLNYGSVTDIAPDIKLTFHNAGH-ILGSAIAHFHLGDGLYN 344 Query: 160 IVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I TGD+ + V+ L AL +ST + K ++ +Y Sbjct: 345 IAFTGDFNYGKSRLFNPAVSTFPRLE--------ALFMESTYGGANDMQPARKDAEEKLY 396 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSII 244 + + G V++ F+ V R + ++ Sbjct: 397 ETVNKVLERSGKVIIPAFA--VGRSQEVM 423 >gi|222529916|ref|YP_002573798.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456763|gb|ACM61025.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 821 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 96/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L G + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKN----ILIDSGIRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + H+ YA+ L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ + I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNA 224 D + ++ ++C+ST R E+ + + +++ Sbjct: 169 SADRQLTVDK-------ASVPKIRPDVVICESTYGDRLHTNRNFEEERLFNTVAEVISQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + II I Sbjct: 222 -GKVLIPAFA--IGRAQEIILILRNY 244 >gi|255542245|ref|XP_002512186.1| Cleavage and polyadenylation specificity factor 73 kDa subunit, putative [Ricinus communis] gi|223548730|gb|EEF50220.1| Cleavage and polyadenylation specificity factor 73 kDa subunit, putative [Ricinus communis] Length = 361 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 84/268 (31%), Gaps = 42/268 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L PLG E+G + Y K ++ DCG+ + P I Sbjct: 22 DVLTVTPLGAGNEVGRSCVYMSY----KGKIVLFDCGIHPAYSGM----AALPYFDEID- 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL---------------LE 106 + + ITH H DH +L V+ + + +E Sbjct: 73 -PSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSIE 131 Query: 107 AKRVYERVSKKIPCI--SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 E+ + V+V H + ++ +++TG Sbjct: 132 DMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGH-VLGAAMFMVDIAGVRLLYTG 190 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L + + +ST ++ I EK I+ + Sbjct: 191 DYSREEDRHL-------RAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHSTIS 243 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + ++ I ++ Sbjct: 244 QG-GRVLIPAFA--LGRAQELLLILDEY 268 >gi|126179147|ref|YP_001047112.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125861941|gb|ABN57130.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 630 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 89/268 (33%), Gaps = 44/268 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITF 60 K++ L LG E+G L + I++DCG P G + P+I Sbjct: 175 KDQWLRVTTLGCCREVGRAAFLI----STPESKILVDCGEK-PGSTTNGTPYLYVPEIYP 229 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVY 111 + L A+ +THAH DH + L+ + PVY++ L L+ R Sbjct: 230 L----NTLDAVVLTHAHLDHCALVPLLYKYGYEGPVYSTAPTRDLSTMLQLDYLDVVRKE 285 Query: 112 ERVSKKIPCISFQAGDK---VDVG-------AFSIESVRVNHSIPETMAL-VIRSPVGNI 160 ++ G + H + +A I + NI Sbjct: 286 TDRIPYTSNEVRTYMKHSITLNYGSVTDIAPDVKLTFHNAGHILGSAIAHFHIGEGLYNI 345 Query: 161 VHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 TGD+ + V+ L AL +ST K + +Y+ Sbjct: 346 AFTGDFNYQKSRLFSPAVSSFPRLE--------ALFMESTYGGSNDFQPQRKEAEDKLYE 397 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSII 244 + G V++ F+ V R + ++ Sbjct: 398 TVSTTIKRGGKVIIPAFA--VGRSQEVM 423 >gi|289192018|ref|YP_003457959.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] gi|288938468|gb|ADC69223.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] Length = 510 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 83/497 (16%), Positives = 152/497 (30%), Gaps = 121/497 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----------------------------P 44 G IG N + + +D G++F P Sbjct: 8 GADTIGGN----KIHIEENGNGLFLDFGMNFVKYSKYYEEYLSERPARGIYDLWHLNLIP 63 Query: 45 KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 K ++ DL+ D+ + + A+ I+HAH DH G + L +P+ ASP I + Sbjct: 64 KLNIYRADLIPKDLNIAQYPKIPINAVLISHAHLDHVGNIAILNE--KIPIVASPITITI 121 Query: 105 LEAK---------------------------RVYERVSKKIPCISFQAGDKVDVGAF--- 134 L+A +R S + D V F Sbjct: 122 LKALRDTSISNHLGMDLPYYSIKKQKENGYVLESDRKSPYLSRKVILTEDNNKVEDFIFY 181 Query: 135 ----------------------------SIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I++ ++HSI + I + +TGD+ Sbjct: 182 RPRQNSSSRVKKIEKNDIKTLSEEDLGFEIKAFNIDHSIYGAVG-YIVEGDTVLAYTGDF 240 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAK 225 + ++ + L+ + T R T I+E+ + N I++NAK Sbjct: 241 RCHGKNK-----NETKKFIKEAKNASILITEGTRVNRDNDTNITEEDVYNNALKIVENAK 295 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS--- 282 G V+ + R+ +IA++ GR++++ + ++ GI D+ Sbjct: 296 GLVIADFSPRNFERLEIFKEIAKRTGRELIITTKDAYFLNALKDVAGIDIIDEHIKIYKN 355 Query: 283 ---------DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 +E + LY + + E I+SS Sbjct: 356 LRSTQQKWEEEIYNLYESHFISPFEIRNNQENYILCFSFYDMPHLLDVNPNGGVYIYSSS 415 Query: 334 AIPGNEVAIG--HIKNRLVEQGVRVIAEDA--------ECPVHVSGHPYPNDLKRMYQWI 383 G E + L G + + +H SGH L+++ + I Sbjct: 416 EAFGEEQEFSFLRLWYWLKHFGFEIYGFRVNEYGKPVFDKSLHTSGHISKEGLRKVIEKI 475 Query: 384 RPQVLVAIHGEPLHLVA 400 P ++ +H E L Sbjct: 476 DPNYIIPVHTENPELFK 492 >gi|56204959|emb|CAI23181.1| cleavage and polyadenylation specific factor 3-like [Homo sapiens] Length = 283 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 71/214 (33%), Gaps = 39/214 (18%) Query: 12 GGVGE-IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KN 67 GG G+ +G + L + +M+DCG+ +D D FPD ++I + Sbjct: 76 GGAGQDVGRSCILVSIAGKN----VMLDCGMHMGFND----DRRFPDFSYITQNGRLTDF 127 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER-----VSKKIPC 120 L + I+H H DH GAL P+Y + + R + Sbjct: 128 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 187 Query: 121 ISFQAGDKVDVGAFSIESVRV-------------NHSIPETMALVIRSPVGNIVHTGDWK 167 + Q ++ + + I+ ++V+TGD+ Sbjct: 188 FTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYN 247 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 + D LG I L+ +ST A Sbjct: 248 MTPDRHLGA-------AWIDKCRPNLLITESTYA 274 >gi|302671025|ref|YP_003830985.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302395498|gb|ADL34403.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 456 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 68/479 (14%), Positives = 142/479 (29%), Gaps = 79/479 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP------DI 58 ++ F G+ EIG + G + + + D G ++ +D P Sbjct: 3 KMKFYS--GLKEIGG--TVI--GVETDKAICLFDFGFAYADR----IDSKVPLRKGLEAY 52 Query: 59 TFIM---------------KERKNLMA---------IFITHAHEDHYGALHDLWSFLHVP 94 ++ + + + I+H H DH G L L + P Sbjct: 53 DYVKLGVLNAIDGIYEPEIANKLEIKGYGETDKEIFVIISHMHIDHMGGLGALDQRM--P 110 Query: 95 VYASPFAIGLLEAK--RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 VY S + L + + I VG ++ V+V+H + + Sbjct: 111 VYMSRESATLYHELGVMNELEIREHENIIPVDYDGSFTVGDITVTCVQVDHDVIGACGFM 170 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA----------M 202 I +P GNI +TGD++ + G ++ + Sbjct: 171 IATPDGNICYTGDYRYHGYHPEIS----AAFAQKCK-GADVMISEGVTISHGDVDVLSLE 225 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 SE + + + K +G +++ ++ +V R+ + + + GR++VL Sbjct: 226 GPARETSELTLLDKMKEYAKTEQGLIVINNYNRNVERVHNFVSAIRESGRELVLSP---- 281 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 V K+D+ + G ++ + + Sbjct: 282 --VQAEYVAAFYKEDRFSVYMPEGGEINAPLARNCQVVTRKMLLDNPSGYVLQQDYKDSY 339 Query: 323 AEKDTVIFSS-------RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + S + + + + L G+ V+ + GH P Sbjct: 340 ELFELAGVISVYLHMDGAPLGDYDPSFAKFYDLLSVAGINVV------RCGLGGHAEPYY 393 Query: 376 LKRMYQWIRPQVLVAIHG-EPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIID 433 L++ I P+ L+ +H P L++ K + V + Sbjct: 394 LRKQVDDIAPRTLIPLHSFRPEQLLSKKAGKIILPNVNDTIVLDNGECYYDNSAWCWSY 452 >gi|238853562|ref|ZP_04643933.1| RNA-metabolizing metallo-beta-lactamase family protein [Lactobacillus gasseri 202-4] gi|282852818|ref|ZP_06262159.1| RNA-metabolizing metallo-beta-lactamase [Lactobacillus gasseri 224-1] gi|238833817|gb|EEQ26083.1| RNA-metabolizing metallo-beta-lactamase family protein [Lactobacillus gasseri 202-4] gi|282555926|gb|EFB61547.1| RNA-metabolizing metallo-beta-lactamase [Lactobacillus gasseri 224-1] Length = 433 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 143/443 (32%), Gaps = 72/443 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPG 50 + G+ IG M Y + ++ D G + +D L Sbjct: 3 SKPKTKVTFYNGLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDEDFATLLK 58 Query: 51 VDLV--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L+ PD K + A +I+H H DH A++ L +P+YA P Sbjct: 59 YQLIGDVPDFYDPKVTGKEIDHERWEHSAAYISHLHLDHSKAMNLLAPE--IPLYAGPLT 116 Query: 102 IGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 LL + + P I+ + + + VG ++ V +H L+ Sbjct: 117 AALLPVLNRDGEFLLPAADKPKNYTRPIIAAKLNEPIHVGDITLTVVPSDHDAYGATGLI 176 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 +++P IVHTGD + + G D +G L+ + T + Sbjct: 177 VKTPDKTIVHTGDIR-----LHGYHPDWVRKFMAAGKGCDMLIIEGTGVSWPERSEDDSE 231 Query: 213 IKKNIYDIMKNA-----------KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-- 259 K + + ++ K + T+ ++V RI II RK+VL Sbjct: 232 EFKGVKNEIELTQRIVQYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRA 288 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 L ++ + + L Q + Q+ + Sbjct: 289 ELLKLALKQDVPYYYLPEDEKIDALDPDLEISYQ------DLLKDDHQYFWQVVGHYDQ- 341 Query: 320 VKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 L + I S + + + A + ++G+ +I + SGH +LK Sbjct: 342 --LQKGGLYIHSNAEPLGDFDPAYAPFIENIKKRGIELIT------LRCSGHADVAELKE 393 Query: 379 MYQWIRPQVLVAIHGEPLHLVAH 401 + P++L +H L + Sbjct: 394 IIAGFEPKILAPVHTLHPELEEN 416 >gi|312621851|ref|YP_004023464.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] gi|312202318|gb|ADQ45645.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] Length = 821 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 94/260 (36%), Gaps = 43/260 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L G + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKN----ILIDSGIRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + ++ Y + L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPNIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ + I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNA 224 D + ++ ++C+ST R E+ + + +++ Sbjct: 169 SADRQLTVDK-------ASVPKIRPDVVICESTYGDRLHTNRNFEEERLFNTVAEVISQG 221 Query: 225 KGCVLVTTFSSSVSRIRSII 244 G VL+ F+ + R + II Sbjct: 222 -GKVLIPAFA--IGRAQEII 238 >gi|288928712|ref|ZP_06422558.1| metallo-beta-lactamase domain-containing protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329696|gb|EFC68281.1| metallo-beta-lactamase domain-containing protein [Prevotella sp. oral taxon 317 str. F0108] Length = 424 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 75/410 (18%), Positives = 134/410 (32%), Gaps = 29/410 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + +++ I+ID G + P V + I + + AIF Sbjct: 17 GANQIGGCITEI----ATAQSRIIIDLGSNLPGSK---VKELMA--EQIAEVVSGVDAIF 67 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV--------YERVSKKIPCISFQ 124 TH H DH G + +P Y A+ +++ K + +S ++Q Sbjct: 68 YTHYHGDHVGLFQFVPD--SIPQYIGEGALKVMKCKYETLSRHENIEQELSAINRMKTYQ 125 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + +G I +HS ++ I + I+HTGD++ D + Sbjct: 126 VNCTIQIGDIRITPYYCSHSAFDSYMFKIETQGRVILHTGDFRRHGYLGKS----LDGVL 181 Query: 185 AIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + L+ + T R + E I+ N ++K K V S+ + R+ S Sbjct: 182 KKYIRQVDILITEGTMLSRPHEKVLPEYAIQANTIKVLKRHK-YVFALCSSTDMERLASF 240 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 +Q GR + K+++ + + + Q E + Sbjct: 241 HAGCKQTGR-VFYCDRYQKKILDIFTNYTQAELFQFTHIFELTSYKANRVKRKLQHEGFL 299 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI--KNRLVEQGVRVIAEDA 361 P A + V E +I+S N I + I + Sbjct: 300 MPVRASQINLIKAIMQVYGDEPACLIYSMWQGYHNGKEENRIPGIIEIRNLFGTRIFDGT 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-HGEPLHLVAHKELALQEGI 410 H SGH L + Q +RP++ V H E L + Sbjct: 360 AHGFHTSGHADVATLGHLCQLVRPRMGVVFIHKEAQTTGKALHLPPDIHV 409 >gi|116630200|ref|YP_815372.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus gasseri ATCC 33323] gi|116095782|gb|ABJ60934.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus gasseri ATCC 33323] Length = 433 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 143/443 (32%), Gaps = 72/443 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPG 50 + G+ IG M Y + ++ D G + +D L Sbjct: 3 SKPKTKVTFYNGLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDEDFATLLK 58 Query: 51 VDLV--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L+ PD K + A +I+H H DH A++ L +P+YA P Sbjct: 59 YQLIGDVPDFYDPKVTGKEIDHERWEHSAAYISHLHLDHSKAMNLLAPE--IPLYAGPLT 116 Query: 102 IGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 LL + + P I+ + + + VG ++ V +H L+ Sbjct: 117 AALLPVLNRDGEFLLPAADKPKNYTRPIIAAKLNEPIHVGDITLTVVPSDHDAYGATGLI 176 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 +++P IVHTGD + + G D +G L+ + T + Sbjct: 177 VKTPDKTIVHTGDIR-----LHGYHPDWVRKFMAAGKGCDMLIIEGTGVSWPERSEDDSE 231 Query: 213 IKKNIYDIMKNA-----------KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-- 259 K + + ++ K + T+ ++V RI II RK+VL Sbjct: 232 EFKGVKNEIELTQRIVQYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRA 288 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 L ++ + + L Q + Q+ + Sbjct: 289 ELLKLALKQDVPYYYLPEDEKIDALDPDLEISYQ------DLLKDDHQYFWQVVGHYDQ- 341 Query: 320 VKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 L + I S + + + A + ++G+ +I + SGH +LK Sbjct: 342 --LQKGGLYIHSNAEPLGDFDPAYAPFIENIKKRGIELIT------LRCSGHADVAELKE 393 Query: 379 MYQWIRPQVLVAIHGEPLHLVAH 401 + P++L +H L + Sbjct: 394 IIAGFEPKILAPVHTLHPELEEN 416 >gi|222530634|ref|YP_002574516.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222457481|gb|ACM61743.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 591 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 67/380 (17%), Positives = 135/380 (35%), Gaps = 42/380 (11%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER----KNLMAIFITHAHEDHY 81 + + ++IDCG P + DI + ++ + A+ I+HAH DHY Sbjct: 238 HFLRFENEILVIDCG------SQPR-EFCIVDIEGFLAQKGYSTNMIKAVLISHAHYDHY 290 Query: 82 GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 + L +PVYA+ I L+ KKI I Q ++ ++G F + + Sbjct: 291 SFVQYLPHQ--IPVYATKETIDLIFIMNRECLRGKKINFI--QYAEEFEIGKFKVSAFPN 346 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 H I + I +++TGD+ L ++ + + G + L+C+ T Sbjct: 347 GH-ILGSAGFDIYFGNRRLIYTGDFSL-HSQMILEGMSLQEILKKGK--VTYLVCEHTYG 402 Query: 202 --MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR---KIVL 256 + D + K V + FS + R + ++ I R K+++ Sbjct: 403 IKDFAIKYEDAARCLAHAVDFLVKLKLKVFIPAFS--IGRAQEVLAIINAYCRTRPKVIV 460 Query: 257 LG--SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 G + + L S+ + +++V ++G P S Sbjct: 461 DGLAKEISLYYLEKREKNFFYNVSLGNSNNVENNIKKAEVVVASSGMLQ-PNSIAV---- 515 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V+L F + I + + V + +S H Sbjct: 516 ---KYVQLLNGSAFGFIKSGYIEEQQYIHEMIKVIKNFEVHY------FDIPLSAHSNYF 566 Query: 375 DLKRMYQWIRPQVLVAIHGE 394 ++ R + + P+ ++ +HG+ Sbjct: 567 EILRTLRILEPEKIILVHGQ 586 >gi|15791270|ref|NP_281094.1| mRNA 3'-end processing factor-like protein [Halobacterium sp. NRC-1] gi|169237028|ref|YP_001690228.1| mRNA 3'-end processing factor-like protein [Halobacterium salinarum R1] gi|10581905|gb|AAG20574.1| mRNA 3'-end processing factor homolog [Halobacterium sp. NRC-1] gi|167728094|emb|CAP14882.1| mRNA 3'-end processing factor homolog [Halobacterium salinarum R1] Length = 410 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 60/426 (14%), Positives = 131/426 (30%), Gaps = 78/426 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LGG E+G + L G + +++D G V PD Sbjct: 1 MDLRF--LGGAREVGRSALLVG-------ESLLLDFGTKADTPPQFPVSTPTPD------ 45 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFA----IGLLEAKRVYERVSKKI 118 A+ +H H DH G + L S P++ +P + L + Sbjct: 46 ------AVVASHGHLDHVGTIPALLSGTHRPPIHWTPPTYELALTLARDTLKLHGGTYHC 99 Query: 119 PCISFQ------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 P I G D + + H +P + +++ +++TGD+ Sbjct: 100 PFIENDIKRVTEVSRTHGYGVPFDAAGYEVTFYNAGH-VPGSAHVLVDDGDTRLLYTGDF 158 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 D ++ T ++C+ST + ++ + +K Sbjct: 159 HTTDQRLVSGTT--------ARPEADVVVCESTYSDVTHDDRD--SVEARFAESVKTTLW 208 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL-- 281 G V+V F+ + R + ++ + + + G + + G ++ Sbjct: 209 EGGTVVVPAFA--IGRTQELLLVCDAHDIPCYVDGMGKRVTEMLLRYPGFVRDGDALRRA 266 Query: 282 ---------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 D +Q ++ T A+ + ++ + + + Sbjct: 267 KSHARFVTGRDGQRKRIADQQAAIVTTSGMLSGGPAMTYI-----PEIRSNPVNKIAMTG 321 Query: 333 RAIPGNEVAIGHIKN----RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVL 388 + G + + + + + V A+ + S H L+ R + Sbjct: 322 YQVAG--TPGRSLIDSGRAEIDGRVLPVSAQVEQYDF--SAHADHAGLRAFLDDYRDATV 377 Query: 389 VAIHGE 394 + HG+ Sbjct: 378 LVNHGD 383 >gi|297739612|emb|CBI29794.3| unnamed protein product [Vitis vinifera] Length = 581 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 87/268 (32%), Gaps = 42/268 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L+ PLG E+G + Y K I+ DCG+ + P I Sbjct: 21 DQLIITPLGAGNEVGRSCVYMSY----KGKTILFDCGIHPAYSGM----AALPYFDEID- 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR------------ 109 + + +TH H DH +L V+ + + + Sbjct: 72 -PSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVE 130 Query: 110 ----VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + + + + I ++V H + ++ +++TG Sbjct: 131 DMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGH-VLGAAMFMVDIAGVRVLYTG 189 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMK 222 D+ ++D L I + +ST ++ + EK I+ + Sbjct: 190 DYSREEDRHL-------RAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIHSTIS 242 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ ++ + R + ++ I ++ Sbjct: 243 QG-GRVLIPAYA--LGRAQELLLILDEY 267 >gi|19115175|ref|NP_594263.1| mRNA cleavage and polyadenylation specificity factor complex subunit Ysh1 [Schizosaccharomyces pombe 972h-] gi|74626605|sp|O13794|YSH1_SCHPO RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1 gi|2408029|emb|CAB16227.1| mRNA cleavage and polyadenylation specificity factor complex subunit Ysh1 [Schizosaccharomyces pombe] Length = 775 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 39/304 (12%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L F+ LG E+G + + Y K +M+D GV L P Sbjct: 34 QDLLEFINLGAGNEVGRSCHVIQY----KGKTVMLDAGVHPAYTGL----SALPFFD--E 83 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + I+H H DH +L + V+ + + + + Sbjct: 84 FDLSTVDVLLISHFHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGM 143 Query: 121 ISF-----------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 ++V H + + NI+ T Sbjct: 144 EDQLYDEKDLLAAFDRIEAVDYHSTIEVEGIKFTPYHAGH-VLGACMYFVEMAGVNILFT 202 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ ++D L + + + L+ +ST EK + + I Sbjct: 203 GDYSREEDRHLH-------VAEVPPKRPDVLITESTYGTASHQPRLEKEAR-LLNIIHST 254 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 + V ++ R + ++ I ++ L S+ + ++ + Q +++ Sbjct: 255 IRNGGRVLMPVFALGRAQELLLILDEY-WNNHLDLRSVPIYYASSLARKCMAIFQTYVNM 313 Query: 284 ESFG 287 + Sbjct: 314 MNDN 317 >gi|325186851|emb|CCA21396.1| cleavage and polyadenylation specific factor 3 puta [Albugo laibachii Nc14] Length = 759 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 58/461 (12%), Positives = 131/461 (28%), Gaps = 59/461 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG E+G + + + K IM+DCGV P G P + Sbjct: 18 MRIMPLGAGNEVGRSCIILKF----KGKTIMLDCGV-HPGYSGHG---SLPFFDGVE--A 67 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV-----------YE 112 + + + +TH H DH AL + V+ + +++ + Sbjct: 68 EEIDLLLVTHFHIDHVAALPHFTEKTNFKGRVFMTHPTKAVMQMMLRDFLRVSNISVDDQ 127 Query: 113 RVSKKIPCISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 K + +D H + +I +++TGD+ Sbjct: 128 IYDDKDLNNCVAKVEIIDFHQEKTHNGIKFTPYNAGH-VLGACMYLIEIGGVKVLYTGDY 186 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 L++D L + L+ +ST ++ + E+ + + + Sbjct: 187 SLENDRHLMA-------AELPACSPDVLIVESTYGVQVHQSVVERE-GRFTGQVESVIRR 238 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 ++ R + ++ I ++ I + + V + D+ Sbjct: 239 GGRCLIPVFALGRTQELLLILDEHWQAHPDLHDIPIYFASKLAAKALRVYQTYINMMNDR 298 Query: 279 LFLSDESFGLYPREQLIVIATGSQGE----------PRSALAQLSRGEMRNVKLAEKDTV 328 + + + + + + + P + +SR +++ Sbjct: 299 IRKQIAVSNPFLFDHISNLKSMDDFDDSGPCVVMASPGMLQSGVSRQLFERWCSDKRNAC 358 Query: 329 IFSSRAIPGN-EVAIGHIKNRLVEQGVRV-IAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + + G I +V RV + S H + + P Sbjct: 359 LIPGYVVEGTLAKKILSEPTEIVAMDGRVLPMNCTVEYISFSAHADFVGTSGFVEKLVPP 418 Query: 387 VLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 +V +HGE + L + + Sbjct: 419 NIVLVHGEKNEMMRLKSALNKKFHDPKTYRPNIFTPANMQE 459 >gi|326482980|gb|EGE06990.1| endoribonuclease ysh1 [Trichophyton equinum CBS 127.97] Length = 818 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 21 SDELLFHCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH G+L + S + V+ + + + Sbjct: 73 --LSTVDILLISHFHLDHSGSLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTSLYNEHDHLSTLPIIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G+ ++ +ST + E+ + Sbjct: 190 ILFTGDYSREE--------DRHLISAEVPKGVKIDVMITESTFGISSNPPRLERE-AALM 240 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 241 KSVTSIINRGGRVLMPVFALGRAQELLLILDEY 273 >gi|281201684|gb|EFA75892.1| integrator complex subunit 11 [Polysphondylium pallidum PN500] Length = 648 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 69/467 (14%), Positives = 143/467 (30%), Gaps = 92/467 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +PLG ++G + + G+ + IM DCG+ D + FPD +FI K + Sbjct: 3 IKVVPLGAGQDVGRSCVIVSIGNKN----IMFDCGMHMGYHD----ERRFPDFSFISKTK 54 Query: 66 ---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYAS---------------------- 98 K L + ITH H DH GAL P+Y + Sbjct: 55 QFTKVLDCVIITHFHLDHCGALPYFTEICGYDGPIYMTVCYKCLISISIYKYNYNSLTFM 114 Query: 99 -----PFAIGLLEAKRVYERV-----SKKIPCISFQAGDKVDVGAFSIESVRV------- 141 ++ R + + Q + + Sbjct: 115 LQLIQLPTKAIVPILLEDYRKIVVDRKGETNFFTPQMIKDCMKKVIPVALHQTIDVDDEL 174 Query: 142 ------NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM 195 + + ++V+TGD+ + D LG I L+ Sbjct: 175 SIKPYYAGHVLGAAMFYCKVGEESVVYTGDYNMTPDRHLGS-------AWIDAVNPTLLI 227 Query: 196 CDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--- 250 ++T A R+ E+ K +++ G VL+ F+ + R++ + + + Sbjct: 228 TETTYATTIRDSKRGRERDFLKRVHE-CVEKGGKVLIPVFA--LGRVQELCILIDTYWEQ 284 Query: 251 -GRKIVLLGSS--LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 G + + S ++ ++ + ++ + + P Sbjct: 285 MGLSVPIYFSEGLAEKANFYYKLFIGWTNQKIKQTFVKRNMFDFKHIKPFDRMLVDAPGP 344 Query: 308 A-LAQLSRGEMRNVKLAEKDTVIFS---SRAIPGNEVAIGHIKNRL-----------VEQ 352 L L S IPG +G + N+L +++ Sbjct: 345 MVLFATPGMLHAGASLEVFKKWAPSELNMTIIPGY-CVVGTVGNKLLSNASGPQMVEIDK 403 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + + + S H + ++ + +P+ ++ +HGE + Sbjct: 404 KTTLEVKCKIHNLSFSAHADAKGIMQLIKMSQPKNVLLVHGEKEKMR 450 >gi|269126783|ref|YP_003300153.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311741|gb|ACY98115.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 667 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 79/460 (17%), Positives = 138/460 (30%), Gaps = 82/460 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKE 64 L PLGG EIG + L G I++D GV +F LP D+ Sbjct: 230 LRVTPLGGDTEIGGSCLLVEAGGTR----ILVDAGVRTFDGRTLPPRDIE-------RAL 278 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------EAKRVYERVS 115 L A+ +THAH DH G + L + + + A+P + L+ + R +R Sbjct: 279 EGELHAVVVTHAHNDHCGYVPALVAQSPRLRILATPETVRLMPMMWEDTVKVMREQDRSL 338 Query: 116 KKI------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 C +G ++E H I VIR+ Sbjct: 339 ASWGSAATVLYGPAEVEAAAHRCEEVPFTVPRRIGELTVELFPAGH-ILGAAGAVIRAGD 397 Query: 158 GNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 IV TGD + + D G L+ ++T E + Sbjct: 398 RRIVVTGDISGFRQESVDGYTLPDSSR-------GADLLVMETTCCGDTH-DDRELRVGD 449 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLK----------- 262 + ++ + +G V + ++ R + I I + + + G + Sbjct: 450 FVREVQEICQGGGRVLIPAFALGRAQEIALILRRYLPEVPLRIDGMAADLSAAFEAATAD 509 Query: 263 ---------RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 V+VA + + + + G+ + A EP SAL Sbjct: 510 SAHPLKIFGDSVAVADRPAELDTFRTGVIITTSGMLTGGPAVQWAARILPEPSSALFISG 569 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 + + + + + GN V+ V + VS H Sbjct: 570 YQD----EESPGARLRKLAEEGGGNFTLPDRSGQVTVQVKAHVAT------MRVSAHADR 619 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 L + + + +HG P +E+ Sbjct: 620 RGLLNIADEVGAHQTMLVHGLPNRQRRFREVLRLRDHDTT 659 >gi|148643098|ref|YP_001273611.1| metal-dependent RNase [Methanobrevibacter smithii ATCC 35061] gi|148552115|gb|ABQ87243.1| predicted metal-dependent RNase [Methanobrevibacter smithii ATCC 35061] Length = 636 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 74/454 (16%), Positives = 137/454 (30%), Gaps = 83/454 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N+ +GG E+G + L + +++DCGV+ D FP + Sbjct: 177 NDWARVTSMGGFKEVGRSSMLL----QTPNSRVLLDCGVNVAASDN---KNAFPYLNVPE 229 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-----LEAKRVYERVSK 116 + L A+ I+HAH DH G + L+ + P+Y + L L+ + R Sbjct: 230 FSIEELDAVIISHAHLDHCGFVPYLYHYGYEGPIYCTTPTRDLTTLLQLDHLDIAHREGN 289 Query: 117 KIPCISFQAGDKVDVG-------------AFSIESVRVNHSIPETM-ALVIRSPVGNIVH 162 +P + + H + + + I N+V+ Sbjct: 290 PLPFNVKHVQKAIKHTITLDYGEVTDISPDIRLTLHNAGHILGSAISHMHIGDGAHNLVY 349 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-IM 221 TGD+K + +L T ++ +ST RE S +K + I Sbjct: 350 TGDFKYERSRLLEPATF--RFPR-----AETVIMESTYGGREDIQPSRNSAEKEMMKTIY 402 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG---------------- 258 K K V +V R + ++ + E+ I + G Sbjct: 403 KTLKRGGKVLVPVFAVGRAQELMVVLEEYMRHGMIDEVPIYIDGMIWEATAIHTARPEYL 462 Query: 259 -SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI---------VIATGSQGEPRSA 308 L+ + I + + E ++ G+ E Sbjct: 463 SKDLRDQIFHMGRNPFISDMFNKVQNLDQRKDIVESNSPAIILSTSGMLTRGNSVEYFKW 522 Query: 309 LAQLSRGEMRNVKLAE----KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 L + R + V + + +P E + N +E Sbjct: 523 LCEDDRNTLIFVGYQSEGSLGRRIQKGWKEVPLEEDNKTKVFNVKMEIKTINGF------ 576 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPL 396 SGH L + + P+ ++ HG+P Sbjct: 577 ---SGHSNRRQLMDYVKRLNPRPDKVITCHGDPY 607 >gi|222445335|ref|ZP_03607850.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii DSM 2375] gi|261350104|ref|ZP_05975521.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii DSM 2374] gi|222434900|gb|EEE42065.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii DSM 2375] gi|288860890|gb|EFC93188.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii DSM 2374] Length = 636 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 74/454 (16%), Positives = 137/454 (30%), Gaps = 83/454 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N+ +GG E+G + L + +++DCGV+ D FP + Sbjct: 177 NDWARVTSMGGFKEVGRSSMLL----QTPNSRVLLDCGVNVAASDN---KNAFPYLNVPE 229 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-----LEAKRVYERVSK 116 + L A+ I+HAH DH G + L+ + P+Y + L L+ + R Sbjct: 230 FSIEELDAVIISHAHLDHCGFVPYLYHYGYEGPIYCTTPTRDLTTLLQLDHLDIAHREGN 289 Query: 117 KIPCISFQAGDKVDVG-------------AFSIESVRVNHSIPETM-ALVIRSPVGNIVH 162 +P + + H + + + I N+V+ Sbjct: 290 PLPFNVKHVQKAIKHTITLDYGEVTDISPDIRLTLHNAGHILGSAISHMHIGDGAHNLVY 349 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-IM 221 TGD+K + +L T ++ +ST RE S +K + I Sbjct: 350 TGDFKYERSRLLEPATF--RFPR-----AETVIMESTYGGREDIQPSRNSAEKEMMKTIY 402 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG---------------- 258 K K V +V R + ++ + E+ I + G Sbjct: 403 KTLKRGGKVLVPVFAVGRAQELMVVLEEYMRHGMIDEVPIYIDGMIWEATAIHTARPEYL 462 Query: 259 -SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI---------VIATGSQGEPRSA 308 L+ + I + + E ++ G+ E Sbjct: 463 SKDLRDQIFHMGRNPFISDMFNKVQNLDQRKDIVESNSPAIILSTSGMLTGGNSVEYFKW 522 Query: 309 LAQLSRGEMRNVKLAE----KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 L + R + V + + +P E + N +E Sbjct: 523 LCEDDRNTLIFVGYQSEGSLGRRIQKGWKEVPLEEDNKTKVFNVKMEIKTINGF------ 576 Query: 365 VHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPL 396 SGH L + + P+ ++ HG+P Sbjct: 577 ---SGHSNRRQLMDYVKRLNPRPDKVITCHGDPY 607 >gi|327293421|ref|XP_003231407.1| endoribonuclease ysh1 [Trichophyton rubrum CBS 118892] gi|326466523|gb|EGD91976.1| endoribonuclease ysh1 [Trichophyton rubrum CBS 118892] Length = 855 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 21 SDELLFHCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH G+L + S + V+ + + + Sbjct: 73 --LSTVDILLISHFHLDHSGSLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTSLYNEHDHLSTLPIIETIDFNTTHAINSIRITPFPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G+ ++ +ST + E+ + Sbjct: 190 ILFTGDYSREE--------DRHLISAEVPKGVKIDVMITESTFGISSNPPRLERE-AALM 240 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 241 KSVTSIINRGGRVLMPVFALGRAQELLLILDEY 273 >gi|218884627|ref|YP_002429009.1| Putative exonuclease [Desulfurococcus kamchatkensis 1221n] gi|218766243|gb|ACL11642.1| Putative exonuclease [Desulfurococcus kamchatkensis 1221n] Length = 425 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 68/450 (15%), Positives = 148/450 (32%), Gaps = 60/450 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG E+G L GS ++D GV+F + D P + +K Sbjct: 2 LKIKVLGGGREVGRAAYLIEDGSQK----FLLDYGVNFDERD-------LPRLPHHVKPL 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 + + + I+HAH DH GA L+ +++ + + K + + Sbjct: 51 E-ISGLIISHAHLDHVGAAPYLYITGRPKAFSTMPTMEVARLLVIDFLKLNSAVIEYDMR 109 Query: 120 CISFQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + V + F + H I +M + +++TGD D Sbjct: 110 EFENLYDNTVFLEYGEKYEEEGFKLVLENAGHIIGSSMTYLETGSGHRLMYTGDINNRDT 169 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCV 228 L + ++ +ST R ++K + +I++ KG V Sbjct: 170 WTLPG-------AETLELNVETILIESTYGGRNH--PPRYIVEKKLLEIVEETIDRKGTV 220 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS--VAIDVGIIKKDQLFLS---- 282 L+ FS V R + I + + + + + ++ +K LF Sbjct: 221 LIPAFS--VGRSQEIATLIAAEAPYVDIYLDGMIKDITEIYLRYKKYLKDSSLFAKVFET 278 Query: 283 ------DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + ++IA+ + ++ L + + +++++ S P Sbjct: 279 VNFVSGAKERKKIINKPCVIIASAGMLKGGPSVYYL-----KKIYQNPRNSIVMVSYQAP 333 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGE 394 N ++ + + + S H + L + R + +V IHG Sbjct: 334 -NSNGHKLLEEGGIPELEIDRVNARVEWLDFSSHAGQDGLLDIISRYRTSLKNIVIIHGN 392 Query: 395 PLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + +++ L++ + + + Sbjct: 393 EDEATSLRDVILEKLGSDINIYIPKVGDEI 422 >gi|227894165|ref|ZP_04011970.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus ultunensis DSM 16047] gi|227864037|gb|EEJ71458.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus ultunensis DSM 16047] Length = 431 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 143/438 (32%), Gaps = 65/438 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD---LPGVDL 53 ++ G+ IG M Y ++ D G + P + L +L Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELKLPDESYKTLIKNEL 59 Query: 54 V--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 + P+ K + A +I+H H DH AL+ L +P+YA P L Sbjct: 60 IGDVPNFYDPKVTGKPIDTKRWEHSAAYISHLHLDHSKALNLLAPE--IPLYAGPITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A + P I+ + + VG S+E +H L++++ Sbjct: 118 LPALNEKGNFLLPAAGHDKNYTRPIIAAEYKKPIQVGDISLEIYPSDHDAYGATGLLVKT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 P I +TGD + + G D +G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDWVRAFMKAAKGSDMLIIEGTGVSWPEEKHDENS--- 229 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSII-DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + G T + + R++ D + L+ + V + Sbjct: 230 ------EEFTGPKNETELTEEIVRLQKENPDRQITFNTYPTNVERLLRIIADSPRKVVLN 283 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ--LSRGEMRNV--------KLAE 324 + + + YP L S +P ++ L + + + KL E Sbjct: 284 AQRAHLIKESLNKDYPYYYLPAEQKYSDLDPALEVSYADLLTDKHKYLWQAVSDYDKLQE 343 Query: 325 KDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 I S + + + A ++ ++ + IA + SGH +LK + I Sbjct: 344 GGIYIHSNAEPLGDFDPAYKPFVDQFAKKKIEFIA------LRCSGHADEKELKEIIDGI 397 Query: 384 RPQVLVAIHGEPLHLVAH 401 +P +LV +H L + Sbjct: 398 QPAILVPVHTLHPELEEN 415 >gi|256810164|ref|YP_003127533.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] gi|256793364|gb|ACV24033.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86] Length = 421 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 93/255 (36%), Gaps = 46/255 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IGM+ + + +++DCG+S ++P VD K + A+ Sbjct: 8 GGCQQIGMSCVEVE----TQKSRVLLDCGMSPDTGEIPKVD------------DKLIDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKR------VYERVSKKIPCI 121 I+HAH DH GA+ +Y + L+ E + + + I Sbjct: 52 IISHAHLDHCGAVPFY--KFK-KIYCTHPTADLMFITWRDTLNLTKAYKEEDIQQAMESI 108 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD-DDAILGDVT 178 ++ + H I + ++ + + I++TGD +L T Sbjct: 109 ECLNYYEERQITDDIKFKFYNAGH-ILGSASIYLEADGKKILYTGDINEGISRTLLPADT 167 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSS 235 D D I L+ +ST + K ++K + + + G V++ F+ Sbjct: 168 DIDE--------IDVLIIESTYGSSLDIKPARKTLEKQLIEEIAETIENGGKVIIPVFA- 218 Query: 236 SVSRIRSIIDIAEQI 250 + R + I+ I Sbjct: 219 -IGRAQEILLIINNY 232 >gi|315043764|ref|XP_003171258.1| endoribonuclease ysh1 [Arthroderma gypseum CBS 118893] gi|311345047|gb|EFR04250.1| endoribonuclease ysh1 [Arthroderma gypseum CBS 118893] Length = 853 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 21 SDELLFHCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH G+L + S + V+ + + + Sbjct: 73 --LSTVDILLISHFHLDHSGSLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTSLYNEHDHLSTLPIIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I ++ +ST + E+ + Sbjct: 190 ILFTGDYSREEDRHLIS-------AEVPKSVKIDVMITESTFGISSNPPRLERE-AALMK 241 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 242 SVTSVINRGGRVLMPVFALGRAQELLLILDEY 273 >gi|312792978|ref|YP_004025901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180118|gb|ADQ40288.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 822 Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L + + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKACNKN----ILIDSGIRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + H+ YA+ L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ + I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIQTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNA 224 D + ++ ++C+ST R T S E+ + + +++ Sbjct: 169 SADRQLTVDK-------ASVPKIRPDVVICESTYGDRLHTNRSFEEERLFNTVAEVVSQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + II I Sbjct: 222 -GKVLIPAFA--IGRAQEIILILRNY 244 >gi|296803464|ref|XP_002842585.1| endoribonuclease ysh1 [Arthroderma otae CBS 113480] gi|238838904|gb|EEQ28566.1| endoribonuclease ysh1 [Arthroderma otae CBS 113480] Length = 854 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 90/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 21 SDELLFHCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH G+L + S + V+ + + + Sbjct: 73 --LSTVDILLISHFHLDHSGSLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTSLYTEHDHLSTLPIIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G+ ++ +ST + E+ I Sbjct: 190 ILFTGDYSREE--------DRHLISAEVPKGVKIDVMITESTFGISSNPPRLERE-AALI 240 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 241 KSVTSIINRGGRVLMPVFALGRAQELLLILDEY 273 >gi|215261117|pdb|2ZDF|A Chain A, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261118|pdb|2ZDF|B Chain B, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261119|pdb|2ZDF|C Chain C, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261120|pdb|2ZDF|D Chain D, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311938|pdb|3IDZ|A Chain A, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311939|pdb|3IDZ|B Chain B, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311940|pdb|3IDZ|C Chain C, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311941|pdb|3IDZ|D Chain D, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|215261109|pdb|2ZDE|A Chain A, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261110|pdb|2ZDE|B Chain B, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261111|pdb|2ZDE|C Chain C, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261112|pdb|2ZDE|D Chain D, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311946|pdb|3IE1|A Chain A, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311947|pdb|3IE1|B Chain B, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311948|pdb|3IE1|C Chain C, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311949|pdb|3IE1|D Chain D, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Length = 431 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|215261105|pdb|2ZDD|A Chain A, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261106|pdb|2ZDD|B Chain B, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261107|pdb|2ZDD|C Chain C, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261108|pdb|2ZDD|D Chain D, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311942|pdb|3IE0|A Chain A, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311943|pdb|3IE0|B Chain B, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311944|pdb|3IE0|C Chain C, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311945|pdb|3IE0|D Chain D, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|183448204|pdb|2YVD|A Chain A, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448205|pdb|2YVD|B Chain B, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448206|pdb|2YVD|C Chain C, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448207|pdb|2YVD|D Chain D, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311954|pdb|3IE2|A Chain A, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311955|pdb|3IE2|B Chain B, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311956|pdb|3IE2|C Chain C, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311957|pdb|3IE2|D Chain D, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|55980221|ref|YP_143518.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] gi|81600562|sp|Q5SLP1|RNSE_THET8 RecName: Full=Ribonuclease TTHA0252 gi|301598475|pdb|3IEK|A Chain A, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598476|pdb|3IEK|B Chain B, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598477|pdb|3IEK|C Chain C, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598478|pdb|3IEK|D Chain D, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598479|pdb|3IEL|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598480|pdb|3IEL|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598481|pdb|3IEL|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598482|pdb|3IEL|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598483|pdb|3IEM|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598484|pdb|3IEM|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598485|pdb|3IEM|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598486|pdb|3IEM|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|55771634|dbj|BAD70075.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] Length = 431 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THAH DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|254167850|ref|ZP_04874699.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|197623141|gb|EDY35707.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] Length = 410 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 69/414 (16%), Positives = 134/414 (32%), Gaps = 63/414 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G G ++ D G++ K P + + Sbjct: 7 LGGAEEVG----SLGLYMQIGELRLLFDYGLTPSKP---------PAYP---MHAPPVDS 50 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-----------------VYER 113 +FITH H DH G + + +YA+P +L E Sbjct: 51 LFITHVHLDHSGMVPRIAMEYEANIYATPPTNSVLPLMLNDTIKVANIEGFPIPYTKEEV 110 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + I G +++G+ I H IP + I I+ TGD + + + Sbjct: 111 ENTVDGLIDVDYGKTIELGSLDIIPHSAGH-IPGSAMYEI-KDDRTILFTGDIQTVNTHL 168 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + L+ +ST A RE E K + I + Sbjct: 169 VWGT---------KPVKTDVLIMESTYAGREHPPRDEVE-KNFLAKIEEIVDNGGKAIVP 218 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKR-----------VVSVAIDVGIIKKDQLFLS 282 + +V R + I+ I + ++ + G + R + A + + + Sbjct: 219 AFAVGRTQEIMLILAKTDFEVWVDG--MGRFVTNLFLQNPQYLRSAKKLKKARNKMHIVR 276 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 S + +++ATG E L ++ ++K K ++ + + G + Sbjct: 277 RRSDRRKALKGEVIVATGGMLEGGPVLHYIN-----HLKNDPKSGILLTGYQVEGTNGRL 331 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + L GV+ + S H ++L + P+ ++ +HG+ Sbjct: 332 LMDEGILELYGVKEKIDMDIDFFDFSAHAGHSELIEFAEKCSPERIILMHGDNR 385 >gi|70996586|ref|XP_753048.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Aspergillus fumigatus Af293] gi|74672067|sp|Q4WRC2|YSH1_ASPFU RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1 gi|66850683|gb|EAL91010.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Aspergillus fumigatus Af293] gi|159131784|gb|EDP56897.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Aspergillus fumigatus A1163] Length = 872 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I V + I H + +I N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTVNSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGIKIDVLITESTFGISTNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|326475916|gb|EGD99925.1| endoribonuclease ysh1 [Trichophyton tonsurans CBS 112818] Length = 855 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 21 SDELLFHCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH G+L + S + V+ + + + Sbjct: 73 --LSTVDILLISHFHLDHSGSLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTSLYNEHDHLSTLPIIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G+ ++ +ST + E+ + Sbjct: 190 ILFTGDYSREE--------DRHLISAEVPKGVKIDVMITESTFGISSNPPRLERE-AALM 240 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 241 KSVTSIINRGGRVLMPVFALGRAQELLLILDEY 273 >gi|254167864|ref|ZP_04874713.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|289596605|ref|YP_003483301.1| RNA-metabolising metallo-beta-lactamase [Aciduliprofundum boonei T469] gi|197623155|gb|EDY35721.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum boonei T469] gi|289534392|gb|ADD08739.1| RNA-metabolising metallo-beta-lactamase [Aciduliprofundum boonei T469] Length = 410 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 74/416 (17%), Positives = 139/416 (33%), Gaps = 67/416 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G G ++ D G++ K P + + Sbjct: 7 LGGAEEVG----SLGLYMQIGELRLLFDYGLTPSKP---------PAYP---MHAPPVDS 50 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-----------------VYER 113 +FITH H DH G + + +YA+P +L E Sbjct: 51 LFITHVHLDHSGMVPRIAMEYEANIYATPPTNSVLPLMLNDTIKVANIEGFPIPYTKEEV 110 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + I G +++G+ I H IP + I I+ TGD + + + Sbjct: 111 ENTVDGLIDVDYGKTIELGSLDIIPHSAGH-IPGSAMYEI-KDDRTILFTGDIQTVNTHL 168 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNAKGCVLVT 231 + L+ +ST A RE EK I +I+ N G +V Sbjct: 169 VWGT---------KPVKTDVLIMESTYAGREHPPRDKVEKNFLAKIEEIVDNG-GKAIVP 218 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR-----------VVSVAIDVGIIKKDQLF 280 F+ V R + I+ I + ++ + G + R + A + + Sbjct: 219 AFA--VGRTQEIMLILAKTDFEVWVDG--MGRFVTNLFLQNPQYLRSAKKLKKARNKMHI 274 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV 340 + S + +++ATG E L ++ ++K K ++ + + G Sbjct: 275 VRRRSDRRKALKGEVIVATGGMLEGGPVLHYIN-----HLKNDPKSGILLTGYQVEGTNG 329 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + L GV+ + S H ++L + P+ ++ +HG+ Sbjct: 330 RLLMDEGILELYGVKEKIDMDIDFFDFSAHAGHSELIEFAEKCSPERIILMHGDNR 385 >gi|312876444|ref|ZP_07736428.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796802|gb|EFR13147.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 822 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 43/266 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E+G + L + + I+ID G+ +D P++ + + Sbjct: 1 MEIVFLGGAKEVGASCVLIKACNKN----ILIDSGMRMKEDK-------LPNLQLLRE-L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR---------VYERVS 115 + I+HAH DH G+L + H+ YA+ L++ + + Sbjct: 49 GGVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIP 108 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRV---------NHSIPETMALVIRSPVGNIVHTGDW 166 D+ F+ + I + I++ G+I++TGD+ Sbjct: 109 IYAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIKTQEGSILYTGDF 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNA 224 D + ++ ++C+ST R T S E+ + + +++ Sbjct: 169 SADRQLTVDK-------ASVPKIRPDVVICESTYGDRLHTNRSFEEERLFNTVAEVVSQG 221 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + II I Sbjct: 222 -GKVLIPAFA--IGRAQEIILILRNY 244 >gi|325090760|gb|EGC44070.1| endoribonuclease ysh1 [Ajellomyces capsulatus H88] Length = 893 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSHIEAIDFNTTHTINNIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G + L+ +ST + E+ I Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGVKVDVLITESTFGVSSNPPRLERE-AALI 241 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 KSITSILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|150402550|ref|YP_001329844.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150033580|gb|ABR65693.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 422 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 64/423 (15%), Positives = 126/423 (29%), Gaps = 74/423 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + I+IDCG+ + PDIT ++ A+ Sbjct: 8 GGCHQIGKSCVEI----NTKKSKILIDCGMDPSDNG-------LPDIT-----DSDVDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-----------EAKRVYERVSKKIPC 120 ++HAH DH GA+ +Y +P L+ + R + Sbjct: 52 LVSHAHLDHCGAIPYF--NFK-KIYCNPPTADLMYNVWKDTVSLSKTYREEDIKKSMDVI 108 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++ V ++ H I + +L + +++TGD + L Sbjct: 109 KTVNYREEKQVTPDIKMKMYDAGH-ILGSSSLYLDIDGKKLLYTGDINEIETRTL----- 162 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I ++ +ST + K ++K + D + G V++ F+ Sbjct: 163 --RAADTDFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIENGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDV-----GIIKKD 277 V R + II + G G + + + I Sbjct: 219 VGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMGYSDWLNPKIKNAIENRINPF 278 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + +I+ +G L+ L + + + Sbjct: 279 GNLIKGGDEAFSKEPCIIISTSGMVQGGPVLQYLSLLKNPRNKIILTGYQAEGTIGRSLE 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGE 394 G + + + S H N L R + I +P + +HGE Sbjct: 339 EG--------ATEVKPFKRAIPVNGKVVKIEFSAHADYNSLLRFMKKIPQPSKAIVMHGE 390 Query: 395 PLH 397 Sbjct: 391 RYQ 393 >gi|302927041|ref|XP_003054415.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256735356|gb|EEU48702.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 827 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 86/271 (31%), Gaps = 42/271 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G P D + + Sbjct: 22 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAG------QHPAYDGLAALPFYDD 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + + V+ + + + Sbjct: 72 FDLSTVDVLLISHFHIDHAASLPYVLARTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSS 131 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + P I + + I H + +I NI Sbjct: 132 NPTSQPIYTEQDHLSTFPQIEAIDYHTTHTISSIRITPYPAGH-VLGAAMFLIEIGGLNI 190 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYD 219 TGD+ + D L + I L+ +ST + E+ + + Sbjct: 191 FFTGDYSREQDRHLVS-------AEVPKGVKIDVLITESTYGIASHVPRLERE-QALMKS 242 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 ITSILNRGGRVLMPVFALGRAQELLLILDEY 273 >gi|86141953|ref|ZP_01060477.1| hypothetical protein MED217_02440 [Leeuwenhoekiella blandensis MED217] gi|85831516|gb|EAQ49972.1| hypothetical protein MED217_02440 [Leeuwenhoekiella blandensis MED217] Length = 458 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 64/451 (14%), Positives = 125/451 (27%), Gaps = 81/451 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN+++ LG G + + Y + + I+IDCG+ F +L + + Sbjct: 1 MKNKKINIHFLGAAGTVTGS----KYLVDTGDRKILIDCGL-FQGLK----ELRLKNWEY 51 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VY 111 ++ A+ +TH H DH G L L + P+Y + + + + Sbjct: 52 PPVNVGDIDAVLLTHGHMDHTGYLPRLVKQGFNGPIYGTNPTLDIAKIILNDSAKIQEQE 111 Query: 112 ERVSKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPET 148 + K + + H I Sbjct: 112 AERANKEGYSKHSPAEPLYDLKDVEKTIPHFKGIPQSQWILLFDGIRARFQYNGH-ILGA 170 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + + V +GD D + + L +ST R Sbjct: 171 TYIELDVHGKRFVFSGDIG--------RTNDLLLYPPLKPKKADVLFIESTYGGR--FHP 220 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSS-----------------VSRIRSIIDIAE 248 E +I ++ + G + V +FS + R++ I+D Sbjct: 221 DEIEALPHIEKLVNDTINRDGSLFVPSFSVERAQLMMLIFWKLLKEKKIPRVQMIMDSPM 280 Query: 249 QIGRKIVLL-GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + R+ D + E+ + + ++ GS Sbjct: 281 GANVLELFHRTRDWHRLEDNECDEMCSHFTVVSSYRETMEIRTDNKPKIVIAGSGMLTGG 340 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPV 365 + + + +T++F G + K V Sbjct: 341 RMLNYLETQAQ----NPNNTLLFVGYQAEGTRGRKLLEGEKELKVYGKWVPFKMQVAEIE 396 Query: 366 HVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 +S H +L I +P+ + IHGE Sbjct: 397 GLSAHADHAELMDWMDSIKNKPERIFIIHGE 427 >gi|294495851|ref|YP_003542344.1| beta-lactamase [Methanohalophilus mahii DSM 5219] gi|292666850|gb|ADE36699.1| beta-lactamase domain protein [Methanohalophilus mahii DSM 5219] Length = 413 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 118/399 (29%), Gaps = 66/399 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + L + I+ID G+ + VD +FP +I Sbjct: 7 GGCREVGRSAILV-------NEDILIDYGIKPGERPDYPVDGIFP------------KSI 47 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPC----- 120 F++H H DH GA+ +L L VY + E K R + Sbjct: 48 FVSHGHLDHCGAVPNLM-DLSPEVYMTHMTSRFTEILGRDTLKISERRGLPEPYDEGDLQ 106 Query: 121 ------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDDDAI 173 G++V + H IP ++ + ++++TGD DD + Sbjct: 107 KLSQITRRKHFGEEVRTNDYLARIYSAGH-IPGASSIYLEDKKGESLLYTGDISTDDSRL 165 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLVT 231 + A L+ +ST + E K I I G V++ Sbjct: 166 VS--------KADTMPDADILITESTYFGEDHPPRQEIE-KAFIESIFDTIDIGGTVIIP 216 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGS------SLKR---VVSVAIDVGIIKKDQLFLS 282 F+ + R + I+ + + G + + + + Sbjct: 217 AFA--IGRTQEIMMLLHSEKIPCFVDGMGVAMTDEMLNHPEYLKDPKKLEQAFGFATIVK 274 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 P E +++ T L L + K V+ + + G + Sbjct: 275 GNKRSKIPLEGSVIVTTAGMLNGGPVLYYLDKKADD-----PKTKVMLTGYQVEGTNGRL 329 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 L + S H +LK + + Sbjct: 330 ALDSGFLEIKDRIQHLRCKLEQYDFSAHCGDKELKGLVR 368 >gi|221504752|gb|EEE30417.1| cleavage and polyadenylation specificity factor, putative [Toxoplasma gondii VEG] Length = 1100 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 96/292 (32%), Gaps = 65/292 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + + Y + +M DCGV P G P + Sbjct: 107 EDWVEITPLGAGCEVGRSCVIARYKGLT----VMFDCGV-HPAYSGLGA---LPIFDAVD 158 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------AKR----- 109 ++ +TH H DH GAL L + V+ + + + A+ Sbjct: 159 --MTSVDVCLVTHFHLDHCGALPYLVTKTAFRGRVFMTEPTRVISKLVWLDYARMSAFSQ 216 Query: 110 ----------------------------VYERVSKKIPCISF-QAGDKVDVGAFSIESVR 140 + V + + +V+VG + Sbjct: 217 GSRDNQGAAAAQAAAGSQAEKAGGAFLYDEDDVDATVRMVECLDFHQQVEVGGIKVSCFG 276 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 H + +I +++TGD+ + D + + + + L+C+ST Sbjct: 277 AGH-VLGACMFLIEIGGVRMLYTGDFSRERDRHVP-------IAEVPPVDVQLLICESTY 328 Query: 201 AMREG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + E+ K + DI+ C+L ++ R + ++ I E+ Sbjct: 329 GIHVHDDRQLRERRFLKAVVDIVNRGGKCLL---PVFALGRAQELLLILEEY 377 >gi|221484558|gb|EEE22852.1| cleavage and polyadenylation specificity factor, putative [Toxoplasma gondii GT1] Length = 1100 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 96/292 (32%), Gaps = 65/292 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + + Y + +M DCGV P G P + Sbjct: 107 EDWVEITPLGAGCEVGRSCVIARYKGLT----VMFDCGV-HPAYSGLGA---LPIFDAVD 158 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------AKR----- 109 ++ +TH H DH GAL L + V+ + + + A+ Sbjct: 159 --MTSVDVCLVTHFHLDHCGALPYLVTKTAFRGRVFMTEPTRVISKLVWLDYARMSAFSQ 216 Query: 110 ----------------------------VYERVSKKIPCISF-QAGDKVDVGAFSIESVR 140 + V + + +V+VG + Sbjct: 217 GSRDNQGAAAAQAAAGSQAEKAGGAFLYDEDDVDATVRMVECLDFHQQVEVGGIKVSCFG 276 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 H + +I +++TGD+ + D + + + + L+C+ST Sbjct: 277 AGH-VLGACMFLIEIGGVRMLYTGDFSRERDRHVP-------IAEVPPVDVQLLICESTY 328 Query: 201 AMREG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + E+ K + DI+ C+L ++ R + ++ I E+ Sbjct: 329 GIHVHDDRQLRERRFLKAVVDIVNRGGKCLL---PVFALGRAQELLLILEEY 377 >gi|330809350|ref|YP_004353812.1| beta-lactamase domain-containing protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377458|gb|AEA68808.1| Putative beta-lactamase domain-containing protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 451 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 73/450 (16%), Positives = 128/450 (28%), Gaps = 86/450 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L + + I+IDCG+ F + Sbjct: 1 MRMTFLGAAGTVTGSKYLLEH----DDQRILIDCGL-FQGYKQL----RLHNWDPFELPM 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK-- 116 ++L AI +THAH DH G L L P+YASP L++ A+ E Sbjct: 52 RDLDAIVLTHAHLDHSGYLPVLVRNGYRGPIYASPATCELVKILLRDSARLQEEEAEYAN 111 Query: 117 -----------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 K+ +I R H I + + Sbjct: 112 RKGFSKHAPAFPLYTREHAERALKLLRPIAFEHPVEIARGITILLRRAGH-ILGAATVQV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 ++ +V +GD D E L+ +ST R S + Sbjct: 171 QAGGVTLVCSGDLG--------RPEDPVMFAPKVVEQADILLVESTYGDRRHPHESPEDQ 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-------RKIVLLGSSLKRVVS 266 + +G LV +F+ V R + ++ ++ I L V Sbjct: 223 LAEVITRTALRRGITLVPSFT--VGRAQLLMYHLYRLKQRRAIPDIPIYLNSPMAIDVTR 280 Query: 267 VAIDVG--------------IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + G I + D R ++IA L L Sbjct: 281 LYQRFGDEHRLSREECEGMCHIAHPVRSVKDSMALDLQRTPAVIIAASGMATGGRVLHHL 340 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVS 368 +++ +T++ G I + V +S Sbjct: 341 -----KSLAPNPINTLLMPGFQAGG--TRGARIVAGEPAVRIHGKDVPINAEVVPMQTLS 393 Query: 369 GHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 H +++ + + + P+ +HGEP Sbjct: 394 AHADADEIMQWLRGFKTPPRHTYVVHGEPN 423 >gi|302668632|ref|YP_003833080.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302397596|gb|ADL36498.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 395 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 136/406 (33%), Gaps = 53/406 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++++ P G+ +IG + I+ D G + + I Sbjct: 1 MSDKQIKVTPYRGMSQIGGVCTEI----ATDEARILFDFGAPLEDEG----NQKPLSIEG 52 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKRVYERVSK 116 + K A+F+TH H DH G + + + +PVY A +L E K +V Sbjct: 53 VTKGEVGCDAVFLTHYHGDHVGEVPAILA--GIPVYMQKTAKRILQAQQEHKVSVGQVVW 110 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + G+ +++ I + +HS +++ ++ I+ TGD++L Sbjct: 111 AQDIQALTEGEAIEIKDIKITPLASDHSAIDSLMYLVEGHDKRILITGDYRL-------H 163 Query: 177 VTDKDSLCAIGN--EGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + + L I ++ + TN RE C E+ ++ I+K K L+ + Sbjct: 164 GFNGEKLKETFRSLGHIDLMITEGTNIDRESPFCHDEQWVEGEFKRILKENKYVFLLAS- 222 Query: 234 SSSVSRIRSIIDI--AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 SS++ RI S + G + ++ + D + + Y + Sbjct: 223 SSNIDRIASFSRAIPCGKHGLCDGFQKRLM-KIADIDRDEAFKSRRIWPYDPDKKEDYEK 281 Query: 292 EQL-IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 +V+ G P DT + S + Sbjct: 282 RGFGMVVRAGDFFLPYVE---------EFFGKYPNDTCLIYS------------MWRGYR 320 Query: 351 EQGVRVIAEDAECP---VHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 E +HVSGH DL+ + + P L+ H Sbjct: 321 ELPTVAKFLQCCNKIESIHVSGHITKEDLEYVINVVAPDTLIIHHT 366 >gi|330835859|ref|YP_004410587.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567998|gb|AEB96103.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 638 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 98/265 (36%), Gaps = 39/265 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K+ + LG E+G + L + I++D GV+ + + +FP + Sbjct: 175 KDRYVRVTALGAFQEVGRSAVLVE----TPESRILMDVGVN---PSVNFGERMFPKLDID 227 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYE 112 ++L A+ +THAH DH G + L+ + PVY + + +L+ Sbjct: 228 QLRLEDLDAVVLTHAHLDHSGMIPFLFKYGYEGPVYTTQPTRDIMALMQLDMLDVADKEG 287 Query: 113 RVSKKI---------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL-VIRSPVGNIV 161 R I+ + D+ + H I MA I V N+V Sbjct: 288 RPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHIIGSAMAHLHIGDGVHNLV 347 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYD 219 +TGD+K +L + L+ ++T + SEK + + I + Sbjct: 348 YTGDFKYARTRLLDR-------AVSEFPRVDTLIMETTYGVQEQTNRDQSEKKLIETINN 400 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSII 244 + G VL+ + V R + I+ Sbjct: 401 TINRG-GKVLIPVLA--VGRGQEIM 422 >gi|194386866|dbj|BAG59799.1| unnamed protein product [Homo sapiens] Length = 571 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 66/436 (15%), Positives = 132/436 (30%), Gaps = 76/436 (17%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSF-- 90 M+DCG+ +D D FPD ++I + L + I+H H DH GAL Sbjct: 1 MLDCGMHMGFND----DRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVG 56 Query: 91 LHVPVYASPFAIGLLEAKRVYER-----VSKKIPCISFQAGDKVDVGAFSIESVRV---- 141 P+Y + + R + + Q ++ + Sbjct: 57 YDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVD 116 Query: 142 ---------NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + I+ ++V+TGD+ + D LG I Sbjct: 117 DELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGA-------AWIDKCRPN 169 Query: 193 ALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII------ 244 L+ +ST A R+ E+ K +++ ++ G VL+ F+ + R + + Sbjct: 170 LLITESTYATTIRDSKRCRERDFLKKVHETVERG-GKVLIPVFA--LGRAQELCILLETF 226 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + I ++ ++ + ++ + + Sbjct: 227 WERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADN 286 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSS----RAIPGNEVAIGHI--------------- 345 P + V S R GNE + + Sbjct: 287 PGPMV----------VFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILS 336 Query: 346 -KNRLVEQGVRVIAEDAE-CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 + +L +G +V+ + + S H + ++ P+ ++ +HGE + K+ Sbjct: 337 GQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQ 396 Query: 404 LALQEGIACVPPVRNG 419 QE NG Sbjct: 397 KIEQELRVNCYMPANG 412 >gi|237839761|ref|XP_002369178.1| cleavage and polyadenylation specificity factor, putative [Toxoplasma gondii ME49] gi|211966842|gb|EEB02038.1| cleavage and polyadenylation specificity factor, putative [Toxoplasma gondii ME49] Length = 1100 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 96/292 (32%), Gaps = 65/292 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + + Y + +M DCGV P G P + Sbjct: 107 EDWVEITPLGAGCEVGRSCVIARYKGLT----VMFDCGV-HPAYSGLGA---LPIFDAVD 158 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------AKR----- 109 ++ +TH H DH GAL L + V+ + + + A+ Sbjct: 159 --MTSVDVCLVTHFHLDHCGALPYLVTKTAFRGRVFMTEPTRVISKLVWLDYARMSAFSQ 216 Query: 110 ----------------------------VYERVSKKIPCISF-QAGDKVDVGAFSIESVR 140 + V + + +V+VG + Sbjct: 217 GSRDNQGAAAAQAAAGSQAEKAGGAFLYDEDDVDATVRMVECLDFHQQVEVGGIKVSCFG 276 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 H + +I +++TGD+ + D + + + + L+C+ST Sbjct: 277 AGH-VLGACMFLIEIGGVRMLYTGDFSRESDRHVP-------IAEVPPVDVQLLICESTY 328 Query: 201 AMREG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + E+ K + DI+ C+L ++ R + ++ I E+ Sbjct: 329 GIHVHDDRQLRERRFLKAVVDIVNRGGKCLL---PVFALGRAQELLLILEEY 377 >gi|119494361|ref|XP_001264076.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Neosartorya fischeri NRRL 181] gi|119412238|gb|EAW22179.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Neosartorya fischeri NRRL 181] Length = 878 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + ++ N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLVSIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGIKIDVLITESTFGISTNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|67517547|ref|XP_658594.1| hypothetical protein AN0990.2 [Aspergillus nidulans FGSC A4] gi|74598547|sp|Q5BEP0|YSH1_EMENI RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1 gi|40746402|gb|EAA65558.1| hypothetical protein AN0990.2 [Aspergillus nidulans FGSC A4] gi|259488717|tpe|CBF88384.1| TPA: Endoribonuclease ysh1 (EC 3.1.27.-)(mRNA 3'-end-processing protein ysh1) [Source:UniProtKB/Swiss-Prot;Acc:Q5BEP0] [Aspergillus nidulans FGSC A4] Length = 884 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 86/271 (31%), Gaps = 41/271 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 21 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 71 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTAS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 131 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPYPAGH-VLGAAMFLISIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I+ TGD+ ++D L T I L+ +ST + E+ + Sbjct: 190 ILFTGDYSREEDRHLIPATVPR------GVKIDVLITESTFGISSNPPRLERE-AALMKS 242 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I E+ Sbjct: 243 ITGVLNRGGRVLMPVFALGRAQELLLILEEY 273 >gi|134045242|ref|YP_001096728.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132662867|gb|ABO34513.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 422 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 126/423 (29%), Gaps = 74/423 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + ++IDCG+ + LP + ++ A+ Sbjct: 8 GGCHQIGKSCVEI----NTKKSKVLIDCGMDPSDNGLPDI------------NDSDVDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-----------EAKRVYE-RVSKKIP 119 ++HAH DH GA+ +Y +P L+ + R + + S + Sbjct: 52 LVSHAHLDHCGAIPYF--NFK-KIYCNPPTADLMYNVWKDTVSLSKTYREEDIKKSMDVI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +K ++ H I + +L + +++TGD + L Sbjct: 109 KTVNYREEKQVTSDIKMKMYDAGH-ILGSSSLYLDIDGKKLLYTGDINEIETRTL----- 162 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I ++ +ST + K ++K + D + G V++ F+ Sbjct: 163 --RAADTDFDNIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDV-----GIIKKD 277 V R + II + G G + + + I Sbjct: 219 VGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMGYSDWLNPKIKNAIENRINPF 278 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + +I+ +G L+ L + + + Sbjct: 279 GNLIKGGDEVFSREPCIIISTSGMVQGGPVLQYLSLLKNPRNKIILTGYQAEGTIGRSLE 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGE 394 G + + + S H N L R + I +P + +HGE Sbjct: 339 EG--------ATEVKPFKRAIPVNGKVVKIEFSAHADYNSLLRFMKKIPQPSKAIVMHGE 390 Query: 395 PLH 397 Sbjct: 391 RYQ 393 >gi|289191606|ref|YP_003457547.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] gi|288938056|gb|ADC68811.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp. FS406-22] Length = 421 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 69/432 (15%), Positives = 139/432 (32%), Gaps = 75/432 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IGM+ + + +++DCG+S ++P VD K + A+ Sbjct: 8 GGCQQIGMSCVEVE----TQKGRVLLDCGMSPDTGEIPKVD------------DKVIDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKR------VYERVSKKIPCI 121 ++HAH DH GA+ +Y + L+ E + + I Sbjct: 52 IVSHAHLDHCGAIPFY--KFK-KIYCTHPTADLMFITWRDTLNLTKAYKEEDIQYAMENI 108 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ + H I + ++ + + I++TGD L Sbjct: 109 ECLNYYEERQITENIKFKFYNAGH-ILGSASIYLEADGKKILYTGDINEGVSRTLLP--- 164 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I L+ +ST + K ++K + + + G V++ F+ Sbjct: 165 ----ADTDIDEIDVLIIESTYGSPLDIKPARKTLEKQLIEEIAETIENGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKKDQL----------- 279 + R + I+ I + SL +V + ++ Sbjct: 219 IGRAQEILLIINNYMRSGGLKEVPIYTDGSLIHATAVYMSYINWLNPKIKNMVENRINPF 278 Query: 280 -FLSDESFGLYPREQLIVIATGS----QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + L ++ +I + S G L L + + + + Sbjct: 279 GEIKKADENLVFNKEPCIIVSTSGMVQGGPVLKYLKLLKDPKNKLILTGYQAEGTLGREL 338 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHG 393 G I KN++ +G V + S H N L R + I +P+ + +HG Sbjct: 339 EEG-AKEIQPFKNKIPIRGKVV-------KIEFSAHGDYNSLVRYIKKIPKPEKAIVMHG 390 Query: 394 EPLHLVAHKELA 405 E ++ Sbjct: 391 ERYQSLSFAMTI 402 >gi|238855553|ref|ZP_04645856.1| conserved hypothetical protein [Lactobacillus jensenii 269-3] gi|260665142|ref|ZP_05865992.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii SJ-7A-US] gi|282932331|ref|ZP_06337766.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|313473036|ref|ZP_07813523.1| conserved hypothetical protein [Lactobacillus jensenii 1153] gi|238831837|gb|EEQ24171.1| conserved hypothetical protein [Lactobacillus jensenii 269-3] gi|239528747|gb|EEQ67748.1| conserved hypothetical protein [Lactobacillus jensenii 1153] gi|260561196|gb|EEX27170.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii SJ-7A-US] gi|281303552|gb|EFA95719.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] Length = 427 Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 133/442 (30%), Gaps = 77/442 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD---LPGVDL 53 ++ G+ IG M Y ++ D G ++ P + L L Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELNLPDESYQTLIKYQL 59 Query: 54 V--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 + P+ K L A +I+H H DH AL+ L +P+YA P L Sbjct: 60 IGDVPNFYDPAITGKQLDHTRWEHAAAYISHLHLDHSKALNLLAPE--IPLYAGPITAAL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L I + + VG ++E +H L+I++ Sbjct: 118 LPVLNQNGDFLLPATNHEKGYTRSIIPAKYKSPITVGDITLEVWPSDHDAYGATGLIIKT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE----- 210 P I TGD +L + + + + T E Sbjct: 178 PDKLIAFTGDIRLHGYHPEWVKEYLTA-----VKNADLFIVEGTGISWPEHIGQEFTGPK 232 Query: 211 --KGIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIID--------IAEQIGRKIVLLGS 259 + + I + +N K + T+ ++V R+ I++ A++ L Sbjct: 233 NEDELTEKIVQLEQENPKRQITFNTYPTNVERLLKIVEESPRKVVLHAKRADLLKEALNK 292 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 +L ++ E E L + T L + N Sbjct: 293 DYHYYYLPGEKKYESLDPKLEIAYEDLVKDNHEYLWQVVTN-----YGDLMKNGLYIHSN 347 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 + + + A + L Q + +A + SGH +LK + Sbjct: 348 ------------AEPLGDFDPAYKPFVDALERQNIEFVA------LRCSGHADDKELKEI 389 Query: 380 YQWIRPQVLVAIHGEPLHLVAH 401 ++P++L +H L + Sbjct: 390 IGLVQPRILCPVHTLHPELAEN 411 >gi|146421308|ref|XP_001486604.1| hypothetical protein PGUG_02275 [Meyerozyma guilliermondii ATCC 6260] Length = 770 Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 86/282 (30%), Gaps = 54/282 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ F LGG E+G + + Y K IM+D GV PG + + Sbjct: 5 DDNFRFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGV------HPGYAGLSSLPFYDE 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + + I+H H DH +L + + V+ + + Sbjct: 55 YDLSKVDILLISHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVRVTSIGG 114 Query: 110 --------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + + ++V + H + Sbjct: 115 GGDSRLNSGNETATSSNLYTDDDLIRSFDRIETIDYHSTIEVEGIRFTAYHAGH-VLGAC 173 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + ++ TGD+ ++D L + + L+ +ST Sbjct: 174 MYFVEIGGLKVLFTGDYSREEDRHLQ-------VAEVPPMRPDILITESTFGTATHEPRL 226 Query: 210 EKGIKKN-IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK + I + G +L+ F+ + R + ++ I E+ Sbjct: 227 EKEARMTKIIHLTLLKGGRILMPVFA--LGRAQELLLILEEY 266 >gi|45357994|ref|NP_987551.1| rhodopsin-like GPCR superfamily protein [Methanococcus maripaludis S2] gi|44920751|emb|CAF29987.1| Rhodopsin-like GPCR superfamily:Beta-lactamase-like [Methanococcus maripaludis S2] Length = 433 Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 64/417 (15%), Positives = 133/417 (31%), Gaps = 61/417 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + + + ++ DCGV ++ + + + N + Sbjct: 7 GGASEVGRSCVEL----KTEKSTVLFDCGVKLSHEES----------EYPILDNLNADCV 52 Query: 72 FITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVY----------------ERV 114 F +HAH DH G + L VP +YA+ + + V Sbjct: 53 FASHAHLDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIPYDKADV 112 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 +K + + IP + + + +V+TGD K+ D + Sbjct: 113 NKSLNLFRKARYNHPKDFKDFEFEFFNAGHIPGSSTISLNYGGKRVVYTGDTKVSDTDL- 171 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 D E I L+ +ST + + K I I + + + Sbjct: 172 VKGADLS----YTKEDIACLIVESTYGDKNQENREDAE-KNFINKIKETLERGGIPLVPV 226 Query: 235 SSVSRIRSIIDIAEQIGRKIVLL----GSSLKRVV-SVAIDVGIIKKDQLFL-------- 281 +V R + I+ I + + + G + R++ + + Sbjct: 227 FAVDRSQEILMILNKHDFGVPVYFDGMGRKITRIMLQYPKFLNHPDDLKAAFLNVIEVES 286 Query: 282 --SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 + + I+++T E + + K+++IF+ + E Sbjct: 287 KDRPKIIKDIKQNGGIIVSTAGMLEGGPIIPYI-----HEFMEDPKNSLIFTGYQVE--E 339 Query: 340 VAIGHIKN--RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 A + ++ + + S H ++L+ + + P+VLV HGE Sbjct: 340 TAGRKLLETGKIEIGEFDIEPKLEIASYQFSAHGEMDELREIVKKANPEVLVIQHGE 396 >gi|159905675|ref|YP_001549337.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159887168|gb|ABX02105.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 422 Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 126/423 (29%), Gaps = 74/423 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + I+IDCG+ + LP + + ++ A+ Sbjct: 8 GGCHQIGKSCVEI----NTKKSKILIDCGMDPSDNGLPDI------------KDSDVDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-----------EAKRVYERVSKKIPC 120 ++HAH DH GA+ +Y +P L+ + R + Sbjct: 52 LVSHAHLDHCGAIPYF--NFK-KIYCNPPTADLMYNVWKDTVSLSKTYREEDIKKSMDVI 108 Query: 121 ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++ V ++ H I + +L + +++TGD + L Sbjct: 109 KTVNYREEKQVTPDIKMKMYDAGH-ILGSSSLYLDIDGKKLLYTGDINEIETRTL----- 162 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I ++ +ST + K ++K + D + G V++ F+ Sbjct: 163 --RAADTDFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIENGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDV-----GIIKKD 277 V R + II + G G + + + I Sbjct: 219 VGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMGYSDWLNPKIKNAIENRINPF 278 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + +I+ +G L+ L + + + Sbjct: 279 GNLIKGGDEAFSKEPCIIISTSGMVQGGPVLQYLSLLKNPRNKIILTGYQAEGTIGRSLE 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGE 394 G + + + S H N L R + I +P + +HGE Sbjct: 339 EG--------ATEVKPFKRAIPVNGKVVKIEFSAHADYNSLLRFMKKIPQPSKAIVMHGE 390 Query: 395 PLH 397 Sbjct: 391 RYQ 393 >gi|169767044|ref|XP_001817993.1| endoribonuclease ysh1 [Aspergillus oryzae RIB40] gi|83765848|dbj|BAE55991.1| unnamed protein product [Aspergillus oryzae] Length = 870 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELGFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|282164256|ref|YP_003356641.1| hypothetical protein MCP_1586 [Methanocella paludicola SANAE] gi|282156570|dbj|BAI61658.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 511 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 78/493 (15%), Positives = 145/493 (29%), Gaps = 120/493 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL----------------VFP 56 G IG N +++ + +D G+++ + VD + P Sbjct: 9 GAESIGGN----KIYVEDNQRGVFLDFGMNYARRSAFFVDFLNERAVRGIHDMLYLDIIP 64 Query: 57 ------------DITFIMKERKNL--MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 D+ ++K + A+ ++HAH DH G + L +PV AS +I Sbjct: 65 RINVYRQDLLTSDVEPLIKSYPKVSPEAVLLSHAHTDHNGNIGLL--DHGIPVVASATSI 122 Query: 103 GL--------------------LEAKRVYERVSKKIPCISFQAGDKVDVG---------- 132 + L K K +Q G Sbjct: 123 AIMKAMRDIKSSGLGGDIAYSTLREKDKNNSNLLKTEGSKYQGRQFCYAGKCNPELSEFI 182 Query: 133 ---------------------------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 F I+ VNHSI MA +RS ++ +TGD Sbjct: 183 SDKPGSGGRNAKKLDGCGLEALGKKELPFEIKPFEVNHSIYGAMAYTLRSNNTSLAYTGD 242 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 +++ D+A + ++ + ++E + + K Sbjct: 243 FRIGDNAKQ-----LPDFIKEAKNSSVLIIEGTRTGRSGDMDVTETNVYDTCKATSDDVK 297 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G ++ + + R+ IA +IGR++V+ + ++ G D L + DE Sbjct: 298 GIIIADFSARNFERLEIFKRIAREIGRQLVITAKDAYYLYAIGCAAGTCSTDGLLVYDEL 357 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV-------------KLAEKDTVIFSS 332 + ++ + I+SS Sbjct: 358 KDKKACKYETETLAQDCPVEYVRNHEIKDNPDGYILCMSFYDIKQLLDIEPRGGAYIYSS 417 Query: 333 RAIPGNEVAI--GHIKNRLVEQGVRVIAEDAECP-------VHVSGHPYPNDLKRMYQWI 383 E I +KN L + + H SGH +L+R+ + Sbjct: 418 SEAYSEEQEIDFEKLKNWLELFSIEPHGFTFDNGKPKFIKGFHASGHATGEELERVIDAV 477 Query: 384 RPQVLVAIHGEPL 396 P VL+ +H + Sbjct: 478 DPDVLIPVHTQNN 490 >gi|85079519|ref|XP_956368.1| hypothetical protein NCU03479 [Neurospora crassa OR74A] gi|74630409|sp|Q8WZS6|YSH1_NEUCR RecName: Full=Endoribonuclease ysh-1; AltName: Full=mRNA 3'-end-processing protein ysh-1 gi|18376069|emb|CAD21097.1| related to BRR5 (component of pre-mRNA polyadenylation factor PF I) [Neurospora crassa] gi|28917429|gb|EAA27132.1| hypothetical protein NCU03479 [Neurospora crassa OR74A] Length = 850 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 44/271 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 22 DELMFLNLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----AALPFFDDFD- 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 73 -LSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQDSVRVGNTSSN 131 Query: 111 --------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 E K P I + + I H + +I I Sbjct: 132 PQSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLKIF 190 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNIYD 219 TGD+ ++ D+ + A +G+ L+ +ST + E+ + + Sbjct: 191 FTGDYSREE--------DRHLISAKVPKGVKIDVLITESTYGIASHIPRPERE-QALMKS 241 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 ITGILNRGGRVLMPVFALGRAQELLLILDEY 272 >gi|120405075|ref|YP_954904.1| beta-lactamase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957893|gb|ABM14898.1| beta-lactamase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 457 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 74/455 (16%), Positives = 138/455 (30%), Gaps = 85/455 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDIT 59 M+N EL F LGG + + L S I++DCG+ GV +L + Sbjct: 1 MQNAELTFRSLGGASTVTGSKHLLE----SDGTRILVDCGL------FQGVKNLRELNWA 50 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE 112 + + ++ A+ +THAH DH G L L P+ ++ + + AK Sbjct: 51 PLAVDPSSIDAVVVTHAHLDHTGYLPRLVRDGFRGPIVSTEATAAVADIILRDSAKLQER 110 Query: 113 RVSKKIPCISFQAG---------------DKVDVGAF-----------SIESVRVNHSIP 146 + + + D F ++ R H I Sbjct: 111 DAEFLNRHKATKHHPALPLYDSDDAQRALELFDAHPFGEEFNLPGRGPAVTFRRAGH-IL 169 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + IV TGD D L L+ +ST R Sbjct: 170 GAATVDLAWHGRRIVFTGDLG--------RYDDPVMLDPEPVPAADYLVMESTYGDRLHG 221 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS 259 + D + G V++ F+ V R ++++ ++ G I L Sbjct: 222 HADPAEALAEVIDATVDRGGTVVIPAFA--VGRAQALLYYLWRLHSAGRLPGIPIYLDSP 279 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGL----YPREQLIVIATGSQGEPRSALAQLSRG 315 + + + D+ L ++ I + + + + ++ G Sbjct: 280 MAINASDLLGAFPRDHRLPPEVYDDMCALATYTRDTDESKKITASREPKIVISASGMATG 339 Query: 316 E---MRN--VKLAEKDTVIFSSRAIPGNE-------VAIGHIKNRLVEQGVRVIAEDAEC 363 ++T+I + +PG I + +V Sbjct: 340 GRILHHLKAFAPDPRNTIIVTGYQVPGTRGRSIAAGEPYVKIHGEWIPINAQVANLQM-- 397 Query: 364 PVHVSGHPYPNDLKRMYQ--WIRPQVLVAIHGEPL 396 +S H ++L R P+ + +HGEP Sbjct: 398 ---LSAHADADELIRWAGGFVTAPRQVFVVHGEPQ 429 >gi|14521766|ref|NP_127242.1| hypothetical protein PAB1035 [Pyrococcus abyssi GE5] gi|5458986|emb|CAB50472.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Pyrococcus abyssi GE5] Length = 516 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 83/499 (16%), Positives = 158/499 (31%), Gaps = 127/499 (25%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----------GV---------- 51 G IG I +D G++F K + G+ Sbjct: 8 GANTIGG----TKIHIEDGNNGIFLDFGMNFAKYSMYYEEFLRERTKRGIYDLWMLNLIP 63 Query: 52 -------DLVFPDITFIMKERKNL--MAIFITHAHEDHYGALHDLWSFLHVPVYASP--- 99 DL+ D+ + + A+ I+HAH DH G + L +P+ ASP Sbjct: 64 RLNIYRSDLIPNDLAQEVSRYPRIPVNAVLISHAHLDHVGNVALL--DEKIPIVASPTTL 121 Query: 100 -------------------------------------------FAIGLL-EAKRVYE--- 112 L+ K E Sbjct: 122 VILKALRDTSRGNNLGMETPYYTPRKRTEGNPPLVEANTGKYYPTRDLILTDKFSEEVRR 181 Query: 113 --RVSKKIPCISFQAGDKVDVG----------AFSIESVRVNHSIPETMALVIRSPVGNI 160 R ++ + ++ +G F + + V+HSI A I ++ Sbjct: 182 FMRWRAEVELANKNNIKRIKLGKVQNLEESYLGFEVRAYPVDHSIYGATA-YIIEGDVSV 240 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIY 218 +TGD++ + G + + L+ + T R + +SEK + +N Sbjct: 241 AYTGDFR-----LHGKNGNLTRKFIKAAKNASILITEGTRVSRKNDDFNVSEKEVYENAL 295 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS--LKRVVSVAIDVGIIKK 276 I++ AKG V+ + R+ S IAE+ GR++V+ + A + +++ Sbjct: 296 RIVEEAKGLVIADFSLRNFERLESFKRIAEKTGRELVITTKEAYYLHALKTAGEADHLRE 355 Query: 277 DQLFLS-------DESFGLYPREQLIVIATG-SQGEPRSALAQLSRGEMRNVKLAEKDTV 328 +++ E + L +L V ++ + L + + + V Sbjct: 356 VKIYEDSKTKPEKWEKWILSKYNELKVTPEEITREQENYILCFSFYDMPKLLDIMPSGGV 415 Query: 329 IFSSRAIPGNEVAIG---HIKNRLVEQGVRVIAEDAE--------CPVHVSGHPYPNDLK 377 S + E + + N L G V + H SGH ++L Sbjct: 416 YIYSSSEAFTEEQVFSFLRLWNWLQYFGFEVHGFKVDEHGRPIFEKGFHASGHISKDELV 475 Query: 378 RMYQWIRPQVLVAIHGEPL 396 ++ + + P +V +H E Sbjct: 476 KVIEEVDPDYIVPVHTENP 494 >gi|322699261|gb|EFY91024.1| cleavage and polyadenylation specifity factor [Metarhizium acridum CQMa 102] Length = 829 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G P D + + Sbjct: 24 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAG------QHPAYDGLAALPFYDD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + + V+ + + + Sbjct: 74 FDLSTVDVLLISHFHVDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSS 133 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + I + + I H + +I NI Sbjct: 134 NSTTQPVYTEQDHLNTFSQIEAIDYHTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLNI 192 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKG 212 TGD+ + D L + + I L+ +ST + E+ Sbjct: 193 FFTGDYSREQDRHLVS-------AEVPKDVKIDVLITESTYGIASHVPRLERE 238 >gi|238483863|ref|XP_002373170.1| cleavage and polyadenylation specifity factor, 73 kDa subunit [Aspergillus flavus NRRL3357] gi|220701220|gb|EED57558.1| cleavage and polyadenylation specifity factor, 73 kDa subunit [Aspergillus flavus NRRL3357] Length = 870 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELGFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|312623509|ref|YP_004025122.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203976|gb|ADQ47303.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 591 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 67/380 (17%), Positives = 137/380 (36%), Gaps = 42/380 (11%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER----KNLMAIFITHAHEDHY 81 + + ++IDCG P + DI + ++ + A+ I+HAH DHY Sbjct: 238 HFLRFENEILVIDCG------SQPR-EFCIVDIEGFLAQKGYSTNMIKAVLISHAHYDHY 290 Query: 82 GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 + L +PVYA+ I L+ KKI I Q ++ ++G F + + Sbjct: 291 SFVQYLPHQ--IPVYATKETIDLIFIMNRECLRGKKINFI--QYAEEFEIGKFKVSAFPN 346 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 H I + I +++TGD+ L ++ + + G + L+ + T Sbjct: 347 GH-ILGSAGFDIHFGNRRLIYTGDFSL-HSQMILEGMSLQEILKKGK--VTYLVSEHTYG 402 Query: 202 MREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR---KIVL 256 M++ E + D + K V + FS + R + ++ I R K+++ Sbjct: 403 MKDFAIKYEDAARCLAHAVDFLVKLKLKVFIPAFS--IGRAQEVLAIINAYCRTRPKVIV 460 Query: 257 LG--SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 G + + L S++ + ++V ++G P S Sbjct: 461 DGLAKEISLYYLEKREKNFFYNVSLGNSNDVENNIKKADVVVASSGMLQ-PNSIAV---- 515 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + V+L F + I + + V + +S H Sbjct: 516 ---KYVQLLNGSAFGFIKSGYIEEQQYIHEMIKVIKNFEVHYF------DIPLSAHSNYF 566 Query: 375 DLKRMYQWIRPQVLVAIHGE 394 ++ + + P+ ++ +HG+ Sbjct: 567 EILHTLKILNPEKIILVHGQ 586 >gi|302390470|ref|YP_003826291.1| beta-lactamase domain-containing protein [Thermosediminibacter oceani DSM 16646] gi|302201098|gb|ADL08668.1| beta-lactamase domain-containing protein [Thermosediminibacter oceani DSM 16646] Length = 526 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 86/497 (17%), Positives = 157/497 (31%), Gaps = 127/497 (25%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-------------------PGV-- 51 G IG N L G S + +D G +F + + G+ Sbjct: 10 GADCIGGNKILLEDGKAS----LFLDFGTNFKAEGMFFDEFLGPRSTFGFYDLLCLGILP 65 Query: 52 --------DLVFPDI-----TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS 98 DL +P + + + + + +F++HAH DH G + VPV + Sbjct: 66 PLRSLYRTDLEYPGVWDRFSSHPLYRKNEVTGVFLSHAHFDHCGHFSYIREE--VPVI-T 122 Query: 99 PFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG----------AFSIESVRVNH--SIP 146 L+ ++ I + ++ G F R+ +IP Sbjct: 123 GLTSALICKALQDTGGGNRLQEICYTTPRELKDGLLQTGHYKTTPFRQRRYRIMGIEAIP 182 Query: 147 ---------------------------------------------ETMALVIRSPVGNIV 161 A I++ G I+ Sbjct: 183 ERACGFWERVDNSRALQCCALEACGGESEIGGLTVRFWPVDHSIPGAGAFGIKTSAGWII 242 Query: 162 HTGDWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 +TGD +L +A L LAL+C+ T+ + ++E + N +D+ Sbjct: 243 YTGDLRLHGKNAGLTRWF----FQEAAKLKPLALICEGTHPGTQ-KPVTEGEVAANCFDV 297 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK--------------RVVS 266 + A G V+ +V R+ S +DIA GR++VL + Sbjct: 298 VAKAGGLVVADFGPRNVERLLSFLDIAGNTGRRLVLTAKDIYLLEALDAAGEDGVPDPNE 357 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEPRSALAQLSRGEMRNVKLAE 324 V ++ E L + ++ + L + + Sbjct: 358 DERIVLYLRPKAQRKKWEDALLDRFDPTKMVTAEDIKKDAGSYILCFSYYDFHAFLDIQP 417 Query: 325 -KDTVIFSSRAIPGNEVAI--GHIKNRL----VEQGVRVIAEDAECPVHVSGHPYPNDLK 377 T I+SS E+ I IKN + E + + + H SGH + ++ Sbjct: 418 EGGTYIYSSSEAYDEEMLIDHQRIKNWIDYFGFELYGTLGRDREKSGFHASGHIHGPGIE 477 Query: 378 RMYQWIRPQVLVAIHGE 394 M + I+P+VL+ +H + Sbjct: 478 EMVETIKPEVLIPVHTQ 494 >gi|227889391|ref|ZP_04007196.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus johnsonii ATCC 33200] gi|227850193|gb|EEJ60279.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus johnsonii ATCC 33200] Length = 433 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 75/432 (17%), Positives = 134/432 (31%), Gaps = 72/432 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPGVDLV--FPDIT 59 G+ IG M Y + ++ D G + +D L L+ P+ Sbjct: 14 GLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDEDFSTLLKYQLIGDVPNFY 69 Query: 60 FIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 K + A +I+H H DH A++ L +P+YA P LL Sbjct: 70 DPKITGKEIDHERWQHSAAYISHLHLDHSKAMNLLAPE--IPLYAGPLTAALLPVLNRDG 127 Query: 113 RVSKKIPCISFQA---------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + VG ++ V +H L+I +P IVHT Sbjct: 128 EFLLPAADKPKNYTRPIIAARLNYPIKVGDITLTVVPSDHDAYGATGLIIETPDKTIVHT 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + + G D +G L+ + T + K + + ++ Sbjct: 188 GDIR-----LHGYHPDWVRQFMAAGKGCDMLIIEGTGVSWPERSEEDSEEFKGVKNEVEL 242 Query: 224 A-----------KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS--SLKRVVSVAID 270 K + T+ ++V RI II RK+VL L ++ Sbjct: 243 TERVVKYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRAELLKLALKQDV 299 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + L Q + Q+ + L + I Sbjct: 300 PYYYLPEDEKIDALDPNLEISYQ------DLLKDDHQYFWQVVGHYDQ---LQKGGLYIH 350 Query: 331 S-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 S + + + A + ++G+ +I + SGH +LK + P++L Sbjct: 351 SNAEPLGDFDPAYAPFIENIEKRGIELIT------LRCSGHADVAELKEIIAGFEPKILA 404 Query: 390 AIHGEPLHLVAH 401 +H L + Sbjct: 405 PVHTLHPELEEN 416 >gi|145230249|ref|XP_001389433.1| endoribonuclease ysh1 [Aspergillus niger CBS 513.88] gi|134055550|emb|CAK37196.1| unnamed protein product [Aspergillus niger] Length = 874 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 TDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSSTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLPLIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGVKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 AITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|294658126|ref|XP_460457.2| DEHA2F02134p [Debaryomyces hansenii CBS767] gi|218511903|sp|Q6BMW3|YSH1_DEBHA RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|202952895|emb|CAG88764.2| DEHA2F02134p [Debaryomyces hansenii] Length = 815 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 87/284 (30%), Gaps = 56/284 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ F LGG E+G + + Y K IM+D GV PG+ + + Sbjct: 11 TDDFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGV------HPGLQGLSSLPFYDE 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + + ++H H DH +L + + V+ + + Sbjct: 61 YDLSKVDILLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVKVTSIGG 120 Query: 110 ----------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + + + +++ + H + Sbjct: 121 GSDARLNNSDPNANTGSSNLYTDDDLMRSFDRIETIDYHSTIELDGIRFTAYHAGH-VLG 179 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 I ++ TGD+ ++D L + + L+ +ST Sbjct: 180 ACMYFIEIGGLKVLFTGDYSSEEDRHLQ-------VAEVPPIKPDILITESTFGTATHEP 232 Query: 208 ISEKGIKK-NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK + NI G +L+ F+ + R + ++ I E+ Sbjct: 233 RLEKETRMTNIIHSTLLKGGRILMPVFA--LGRAQELLLILEEY 274 >gi|268320040|ref|YP_003293696.1| hypothetical protein FI9785_1574 [Lactobacillus johnsonii FI9785] gi|262398415|emb|CAX67429.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus johnsonii FI9785] Length = 433 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 77/432 (17%), Positives = 139/432 (32%), Gaps = 72/432 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPGVDLV--FPDIT 59 G+ IG M Y + ++ D G + +D L L+ P+ Sbjct: 14 GLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDEDFSTLLKYQLIGDVPNFY 69 Query: 60 FIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY- 111 K + A +I+H H DH A++ L +P+YA P LL Sbjct: 70 DPKITGKEIDHERWQHSAAYISHLHLDHSKAMNLLAPE--IPLYAGPLTAALLPVLNRDG 127 Query: 112 --------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + P I+ + + VG ++ V +H L+I +P IVHT Sbjct: 128 EFLLPAADKPKNYTRPIIAAKLNYPIKVGDITLTVVPSDHDAYGATGLIIETPDKTIVHT 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + + G D +G L+ + T + K + + + Sbjct: 188 GDIR-----LHGYHPDWVRQFMAAGKGCDMLIIEGTGVSWPERSEEDSEEFKGVKNEVDL 242 Query: 224 A-----------KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS--SLKRVVSVAID 270 K + T+ ++V RI II RK+VL L ++ Sbjct: 243 TERVVKYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRAELLKLALKQDV 299 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + L Q + Q+ + L + I Sbjct: 300 PYYYLPEDEKIDALDPNLEISYQ------DLLKDDHQYFWQVVGHYDQ---LQKGGLYIH 350 Query: 331 S-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 S + + + A + ++G+ +I + SGH +LK + P++L Sbjct: 351 SNAEPLGDFDPAYAPFIENIEKRGIELIT------LRCSGHADVAELKEIIAGFEPKILA 404 Query: 390 AIHGEPLHLVAH 401 +H L + Sbjct: 405 PVHTLHPELEEN 416 >gi|322710530|gb|EFZ02104.1| cleavage and polyadenylation specifity factor [Metarhizium anisopliae ARSEF 23] Length = 831 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G P D + + Sbjct: 24 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAG------QHPAYDGLAALPFYDD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + + V+ + + + Sbjct: 74 FDLSTVDVLLISHFHVDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSS 133 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + I + + I H + +I NI Sbjct: 134 NSTTQPVYTEQDHLNTFSQIEAIDYHTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLNI 192 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKG 212 TGD+ + D L + + I L+ +ST + E+ Sbjct: 193 FFTGDYSREQDRHLVS-------AEVPKDVKIDVLITESTYGIASHVPRLERE 238 >gi|302846726|ref|XP_002954899.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f. nagariensis] gi|300259874|gb|EFJ44098.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f. nagariensis] Length = 477 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 68/437 (15%), Positives = 142/437 (32%), Gaps = 62/437 (14%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN- 67 +P G ++G + + + +M DCG F D FP+ ++ Sbjct: 16 VPTGAGQDVGRSCCIVRMAGRT----VMFDCGAHFGFRDA----RRFPEFG-LLSRAGRF 66 Query: 68 ---LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE------RVSK 116 + A+ ITH H DH GAL P+ + + R + Sbjct: 67 TEIIDAVVITHFHTDHLGALPYFTEICGYRGPILMTYPTFAIAPIMLADYVKVNADRPGE 126 Query: 117 KIPCISFQAGDK-------------VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 ++P D V S H + + + + ++T Sbjct: 127 RLPYNEQHVRDCLRRVTAVDLHQVVVVAPGLSFTFHYAGH-VLGAAMVHMTAGHLTALYT 185 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEG-----ILALMCDSTNA--MREGTCISEKGIKKN 216 GD+ D LG +L G G L+ ++T A +R+ E+ + Sbjct: 186 GDFNSSPDRHLGPAEAPLALLQGGPSGASVRHPDVLISEATYAATLRDSKRARERDLLGA 245 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLL------GSSLKRVVS 266 + + + A G VL+ TF+ + R + ++ D E+ G ++ + +L Sbjct: 246 VVETVA-AGGKVLIPTFA--MGRAQELLMLITDCWERNGLQVPIYFSSAMAARALVYYQL 302 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EMRNVKL 322 + +F++ ++ ++ ++ G R+ Sbjct: 303 LLNWTNANHIHCVFVNVHICVCTHIHTTWMMLAPGPALLFASPGNIASGVALEAFRSWAG 362 Query: 323 AEKDTVIFSSRAI---PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 + K+ ++ + + G++ G RV + S H L + Sbjct: 363 SSKNLLVLAGYQVRGGAGHDNLCGGRSGGRSGGERRVEVRCRIKMLAFSAHADLRGLLGL 422 Query: 380 YQWIRPQVLVAIHGEPL 396 + +P+ +V +HG+ Sbjct: 423 VRRCKPRAVVLVHGQRE 439 >gi|118576828|ref|YP_876571.1| exonuclease of the beta-lactamase fold [Cenarchaeum symbiosum A] gi|118195349|gb|ABK78267.1| exonuclease of the beta-lactamase fold [Cenarchaeum symbiosum A] Length = 417 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 77/435 (17%), Positives = 153/435 (35%), Gaps = 44/435 (10%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG GE+G + G+ + +++D G+ F + P P +K R + + Sbjct: 2 LGAAGEVGRS----GFLVGCNGTNLLLDYGIMFGRRGDP------PKYPVHVKPRD-VDS 50 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA----- 125 I ITHAH DH G + ++ +V YA+ + L + K I Sbjct: 51 IIITHAHLDHSGNVPSMYISGNVDTYATAPTLELSKLLIEDMLKIKSNVHIFDLPEVNSM 110 Query: 126 ---------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 +KV G + E H I +++ S + +TGD + +L + Sbjct: 111 MRSSIKIGFKEKVKRGDATFELRESGHVI-GGGTVLVESEGRKLFYTGDIHVRGSRMLRE 169 Query: 177 VTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + I L+ +ST + + SE + + ++M KG + + +FS Sbjct: 170 -------ADLDVGEIDMLITESTYSQTNQMPRQESEGNLIEFANEVMDR-KGTLFIPSFS 221 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG-LYPREQ 293 S+ + + G KI++ G +LK + ++ ++F + Sbjct: 222 VERSQEVACVLRNANFGHKIIMDGMALKVNDIMLRHPEYLRDSKVFSDAINRSVSIRSHY 281 Query: 294 LIVIATGSQGEPRSALAQLSRGEM----RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 A G S L G + + + ++ + S G ++ Sbjct: 282 ERERALGEPCVVISPAGMLVGGNAIFYLQKLAMDARNGIALVSYQGEGTPGKKLLETGKI 341 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 V +G + SGH +L M + I+ P+ ++ +HG+ E + Sbjct: 342 VSRGKEMSVAAEVKQFQFSGHSDRTELFEMIKSIKGDPE-VLTVHGDRESCSKFAEEITE 400 Query: 408 EGIACVPPVRNGKML 422 + +++ Sbjct: 401 ATGFKAHAAQESEVV 415 >gi|154282371|ref|XP_001541981.1| hypothetical protein HCAG_02152 [Ajellomyces capsulatus NAm1] gi|150410161|gb|EDN05549.1| hypothetical protein HCAG_02152 [Ajellomyces capsulatus NAm1] Length = 925 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSHIEAIDFNTTHTINNIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G + L+ +ST + E+ I Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGVKVDVLITESTFGVSSNPPRLERE-AALI 241 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 KSITSILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|118591606|ref|ZP_01549003.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] gi|118435934|gb|EAV42578.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] Length = 454 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 128/443 (28%), Gaps = 72/443 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGVG + + L +++DCG+ F + + + Sbjct: 3 VKLTFLGGVGTVTGSKYLLE----KDGTRVLVDCGL-FQGYKQL----RLKNWAPLPVDP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVY--- 111 K + A+ +THAH DH G L L PV + L L+ K Sbjct: 54 KTIDAVILTHAHLDHSGYLPLLVRNGFRGPVVCTKATRDLCAILLPDSGFLQEKDAEFAN 113 Query: 112 ------ERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALVI 153 R + + FS+ R H I + + Sbjct: 114 RHGFSKHRPALPLYTKKDAEVSLDRFRPVAFDEAHDMLDAFSVCFRRAGH-ILGAAIVEL 172 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 IV +GD + D + L+ +ST R + I Sbjct: 173 TWGGTRIVFSGDLGR---YGDATMFDPSPIRE-----ADYLLVESTYGNRRHEKLDADDI 224 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSI---IDIAEQIGRKIVLLGSSLKRVVSVAID 270 G V++ +F+ V R +S+ I+ ++ GR L + A + Sbjct: 225 LAEAITKTARRGGTVVIPSFA--VGRAQSLLFHIESLKKTGRIPDLPIFLDSPMAVSASN 282 Query: 271 VGIIKKDQLFLSDESFGL--------YPREQLIVIATGSQGEPRSALAQLSRG----EMR 318 + D L+ E E+ + + + + ++ G Sbjct: 283 IYGKHPDDHRLTPEECDWSNGAAHYVADVEESKDLDRNRMPKVIVSASGMATGGRVLHHL 342 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIK--NRLVEQGVRVIAEDAECPVH-VSGHPYPND 375 + +I + G + G V +H +S H ++ Sbjct: 343 KHYAPDHRNMILFAGFQAGGTRGATMTSGATSVRIHGADVPIRAEVGNLHMLSAHADADE 402 Query: 376 LKRMYQWIR--PQVLVAIHGEPL 396 + + P++ HGEP Sbjct: 403 IMQWLGNFERPPKMTFITHGEPD 425 >gi|330817009|ref|YP_004360714.1| beta-lactamase domain-containing protein [Burkholderia gladioli BSR3] gi|327369402|gb|AEA60758.1| beta-lactamase domain-containing protein [Burkholderia gladioli BSR3] Length = 467 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 71/448 (15%), Positives = 131/448 (29%), Gaps = 82/448 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG + + L +G +++DCG+ F +L + + + Sbjct: 1 MKLSF--LGATETVTGSKYLVEHGGQR----LLVDCGL-FQGPK----NLRLRNWSALPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK 116 +L A+ +THAH DH G L L PVY +P ++ L E A+ E+ Sbjct: 50 APDSLHAVVLTHAHLDHCGYLPVLAREGFRGPVYCTPASMELCEIMLRDSARLQEEQADF 109 Query: 117 KIPCISFQAGDKVDV-------------------------GAFSIESVRVNHSIPETMAL 151 + + + G S+ + H I ++ Sbjct: 110 ANRHGFSKHRQALPLYTVDDAQRALRLLTPRGFDECFTLAGGISLRLLPAGH-ILGAASV 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 V+ + +GD D I+ T L+ +ST R + Sbjct: 169 VVHWDHQVLAFSGDLGRYHDPIMRAPT--------PPVHADYLVVESTYGDRLHPAADPE 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 ++ G V++ F+ V R ++I+ ++ G + V + + Sbjct: 221 PALAEVFARTFARGGVVVIPCFT--VGRAQAILLHIARLRIS----GRMARVPVFLDSPM 274 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV------KLAEK 325 D L E + +++ + V Sbjct: 275 ACDVTDIYRHHILEHRLTMSEAQALGQAAIMTRTVEQSKRIAEQQGPMVIIAGSGMATGG 334 Query: 326 DTVIFSSRAIPGNEVAI------------GHIKNRLVEQGVR----VIAEDAECPVHVSG 369 + SR P I + + + I E +S Sbjct: 335 RVLHHLSRYAPDARNTIVLVGHQAAGTRGAALADGSPTLKIHGEYVRIHAQVESIETLSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H +L R ++ P HGEP Sbjct: 395 HADYEELLRWMGALQRAPSRTFVTHGEP 422 >gi|256391616|ref|YP_003113180.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357842|gb|ACU71339.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 430 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 131/418 (31%), Gaps = 61/418 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI-TFIMKER----- 65 GGVG IG + L +++D G+ P+ V P ++ Sbjct: 9 GGVGVIGSSKVLI----TEGDHRVLLDFGLDIPRGTDLFRPPVVPRPHRYLADRLRVGAA 64 Query: 66 ---------------KNLM------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 L A+F++HAH DH G + L + V+A+P + + Sbjct: 65 PRLPGVYDPAMLEPGDPLAQDGPATAVFVSHAHIDHCGLVGALRP--GIEVHAAPETVAV 122 Query: 105 LEAKRVYERVSK--KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + A + G ++E V V+H +P ++ + G + Sbjct: 123 MRALTAAGDGLPGGDPDWRPLAEEESACFGPLTVERVTVDHDVPGASGYLVTTSDGVLAF 182 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM---REGTCISEKGIKKNIYD 219 TGD + A L G + + T G +E+ + ++ Sbjct: 183 TGDIRFHGRAPERAW----RLAERAA-GCEMFVTEGTALGLPVFPGPVRTEQDVVRDFAA 237 Query: 220 IMKNAKGC-VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 ++ A+G VL+ + + R+ I++A GRKIV + V ++G+ Sbjct: 238 ALEEARGDLVLLAMYPRDLERVAEFIEVAGAAGRKIVWG----EAVAVFLRELGVQDVLA 293 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + LA L GE A + + P Sbjct: 294 FSEVGLQALKDDPGGFVYQPDLRDLRGIPDLADLPVGERTVWLHANGEPLGPFESRWP-- 351 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + + GH +DL + + P+ +V IH + Sbjct: 352 -----------LFTEWLDVLGIPLRRIGSFGHATADDLHTLVHRVAPRTVVPIHTDAP 398 >gi|310796189|gb|EFQ31650.1| metallo-beta-lactamase superfamily protein [Glomerella graminicola M1.001] Length = 855 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 81/270 (30%), Gaps = 42/270 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 23 DELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----AALPFFDDFD- 73 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + I+H H DH +L + S V+ + + + Sbjct: 74 -LSTVDVLLISHFHVDHAASLPYVLSKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSSN 132 Query: 111 --------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 P I + + I H + +I I Sbjct: 133 PTSQPVYTEADHLNTFPQIEAIDYHTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLKIF 191 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+ + D L + I L+ +ST + E+ + + I Sbjct: 192 FTGDYSREQDRHLVS-------AEVPKGVKIDVLITESTYGIASHVPRLERE-QALMKSI 243 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 V ++ R + ++ I ++ Sbjct: 244 TSILNRGGRVLMPVFALGRAQELLLILDEY 273 >gi|163839767|ref|YP_001624172.1| zinc-dependent hydrolase [Renibacterium salmoninarum ATCC 33209] gi|162953243|gb|ABY22758.1| Zn-dependant hydrolase, beta-lactamase family [Renibacterium salmoninarum ATCC 33209] Length = 447 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 142/438 (32%), Gaps = 72/438 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD------------------- 46 + GG+ IG + + +++D G+ P + Sbjct: 3 VSVEFFGGLRVIGSS----KIMVSTPTARVLLDFGLDIPGEVDLFRAPVLERSEHRLRDR 58 Query: 47 -------DLPGV--DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 ++PG+ L P+ + + AIF++HAH DH GAL + L P+YA Sbjct: 59 LAVGFAPEVPGIYDPLQLPEDSPLGLSDSRETAIFLSHAHIDHDGALGFVRPEL--PIYA 116 Query: 98 SPFAIGLLEAKRVYERVSKKI--PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 P + V ++ VG +E++ V+H IP + + Sbjct: 117 HPDTA-----RLEEAIVLAGTGVAFKVRAMPAEITVGDLRVEAIPVDHDIPGAC---VHT 168 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT------CIS 209 P G + +TGD D+ L ++ ++ + + + + S Sbjct: 169 PEGTLAYTGDLNFHRDSALR----SEAFVRAVSDADMLVTETTMLSFVPSEDQPFAAPRS 224 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 E + D +++A G L++ + V R + II++ Q GR +V G + + Sbjct: 225 ETEVLTVAGDAIESAPGIALLSMYERDVERAQRIINLCRQKGRVLVWPG----QQAVLLA 280 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 G+ S + + + + P+ R N + + Sbjct: 281 SFGVSGVVTWDKSRPQRAAHREALVRLAVVAPERMPQQVSLPSVRASPSNFVVQPDVQDV 340 Query: 330 FSSRAIPG--------------NEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 S +P E + N SGH Sbjct: 341 PSLLDLPLQNLPEASVPFIHAQGEPLGPFMANWATWLEWLEKLGILFVAAGSSGHATGES 400 Query: 376 LKRMYQWIRPQVLVAIHG 393 L +M I P V+V IHG Sbjct: 401 LHKMVMDIHPGVVVPIHG 418 >gi|321264788|ref|XP_003197111.1| cleavage and polyadenylation specificity factor [Cryptococcus gattii WM276] gi|317463589|gb|ADV25324.1| Cleavage and polyadenylation specificity factor, putative [Cryptococcus gattii WM276] Length = 778 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 43/232 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LG E+G + + + K I+ D G+ PG+ P I + Sbjct: 29 LTITMLGAGQEVGRSCCVIEH----RGKKIVCDAGL---HPAQPGI-GALPFIDELD--W 78 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLL-EAKRVYERVSKKIP 119 + A+ ITH H DH AL + + VY + + R++ + P Sbjct: 79 STVDALLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNP 138 Query: 120 CI-------------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 D V G H + +I I Sbjct: 139 DTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAGH-VLGASMFLIEIAGLKI 197 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 ++TGD+ ++D L + I ++C+ST + EK Sbjct: 198 LYTGDYSREEDRHLV-------MAEIPPVKPDVMICESTFGVHTLPDRKEKE 242 >gi|226295077|gb|EEH50497.1| endoribonuclease ysh1 [Paracoccidioides brasiliensis Pb18] Length = 888 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR----------- 109 ++ + I+H H DH L + S + V+ + + + Sbjct: 74 --LSSVDILLISHFHLDHSAGLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 110 ----------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 E +S + + + I H + +I N Sbjct: 132 SSDQRTTLYTEEEHLSTLPQIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIS-------AEVPKGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITTILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|225677757|gb|EEH16041.1| endoribonuclease ysh1 [Paracoccidioides brasiliensis Pb03] Length = 888 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR----------- 109 ++ + I+H H DH L + S + V+ + + + Sbjct: 74 --LSSVDILLISHFHLDHSAGLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 110 ----------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 E +S + + + I H + +I N Sbjct: 132 SSDQRTTLYTEEEHLSTLPQIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIS-------AEVPKGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITTILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|255957115|ref|XP_002569310.1| Pc21g23430 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591021|emb|CAP97240.1| Pc21g23430 [Penicillium chrysogenum Wisconsin 54-1255] Length = 862 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 41/271 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHILEY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ +P + + Sbjct: 72 FDLSTVDVLLISHFHVDHSSALPYVLSKTNFKGRVFMTPATRAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + I H + I Sbjct: 132 SSDQRTTLYTERDHLSTLPMIETIDFYTTHTINGIRITPYPAGH-VLGAAMFKIDIAGLV 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + TGD+ ++D L I L+ +ST + E+ + Sbjct: 191 TLFTGDYSREEDRHLIPAAVPS------GTKIDVLITESTFGISSNPPRLERE-AALMKS 243 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 244 ITGILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|72171282|ref|XP_784887.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115687849|ref|XP_001196639.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 124 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 13/115 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +PLG ++G + L GS + IM+DCG+ +D + FPD ++I K Sbjct: 3 DIRIVPLGAGQDVGRSCILLTIGSKN----IMLDCGMHMGFND----ERRFPDFSYINKN 54 Query: 65 R---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV 114 +L A+ I+H H DH GAL + P+Y + + R Sbjct: 55 GRLTDHLDAVIISHFHLDHCGALPHMSEIVGYDGPIYMTQPTKAICPILLEDYRK 109 >gi|116200035|ref|XP_001225829.1| hypothetical protein CHGG_08173 [Chaetomium globosum CBS 148.51] gi|88179452|gb|EAQ86920.1| hypothetical protein CHGG_08173 [Chaetomium globosum CBS 148.51] Length = 854 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 87/271 (32%), Gaps = 44/271 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 23 DELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----AALPFFDDFD- 73 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 74 -LSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSSN 132 Query: 111 --------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + P I + + I H + +I NI+ Sbjct: 133 PTTQLVYTEQDHLNTFPMIEAIDYHTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLNIL 191 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNIYD 219 TGD+ + D+ + A +G + L+ +ST + E+ + + Sbjct: 192 FTGDYSREQ--------DRHLVSAEVPKGVRVDVLITESTYGIASHVPRLERE-QALMKS 242 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 ITGVLNRGGRVLMPVFALGRAQELLLILDEY 273 >gi|15668334|ref|NP_247130.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus jannaschii DSM 2661] gi|2495836|sp|Q57626|Y162_METJA RecName: Full=Uncharacterized protein MJ0162 gi|1590919|gb|AAB98146.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus jannaschii DSM 2661] Length = 421 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 65/430 (15%), Positives = 137/430 (31%), Gaps = 71/430 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IGM+ + + +++DCG+S ++P VD K + A+ Sbjct: 8 GGCQQIGMSCVEVE----TQKGRVLLDCGMSPDTGEIPKVD------------DKAVDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKR------VYERVSKKIPCI 121 ++HAH DH GA+ +Y + L+ E + + I Sbjct: 52 IVSHAHLDHCGAIPFY--KFK-KIYCTHPTADLMFITWRDTLNLTKAYKEEDIQHAMENI 108 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++ + H I + ++ + I++TGD L Sbjct: 109 ECLNYYEERQITENIKFKFYNAGH-ILGSASIYLEVDGKKILYTGDINEGVSRTLLP--- 164 Query: 180 KDSLCAIGNEGILALMCDSTNAM----REGTCISEKGIKKNIYDIMKNAKGCVL------ 229 + I L+ +ST + E+ + + I + ++N ++ Sbjct: 165 ----ADTDIDEIDVLIIESTYGSPLDIKPARKTLERQLIEEISETIENGGKVIIPVFAIG 220 Query: 230 ----VTTFSSSVSRIRSIIDIAEQIG---RKIVLLGSSLKRVVS---VAIDVGIIKKDQL 279 + ++ R + D+ + S ++ + I Sbjct: 221 RAQEILLIINNYIRSGKLRDVPIYTDGSLIHATAVYMSYINWLNPKIKNMVENRINPFGE 280 Query: 280 FLSDESFGLYPREQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + ++ +E I+++T G L L + + + + Sbjct: 281 IKKADESLVFNKEPCIIVSTSGMVQGGPVLKYLKLLKDPKNKLILTGYQAEGTLGRELEE 340 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGEP 395 G I KN++ +G V + S H N L R + I +P+ + +HGE Sbjct: 341 G-AKEIQPFKNKIPIRGKVV-------KIEFSAHGDYNSLVRYIKKIPKPEKAIVMHGER 392 Query: 396 LHLVAHKELA 405 ++ Sbjct: 393 YQSLSFAMTI 402 >gi|255724858|ref|XP_002547358.1| hypothetical protein CTRG_01665 [Candida tropicalis MYA-3404] gi|240135249|gb|EER34803.1| hypothetical protein CTRG_01665 [Candida tropicalis MYA-3404] Length = 783 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 47/226 (20%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + F LGG E+G + + Y K IM+DCG+ FP Sbjct: 10 EDSFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDCGMHPALSGH----ASFPYFD--E 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + V+ + + Sbjct: 60 YDISKVDILLISHFHVDHSASLPYIMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGS 119 Query: 111 ----------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 + + K I +++ + H + I Sbjct: 120 SRAEAGGKDEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGH-VLGACMYFI 178 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 ++ TGD+ +++ L + L+ +ST Sbjct: 179 EIGGLKVLFTGDYSREENRHLHA-------AEVPPLKPDILISEST 217 >gi|224826602|ref|ZP_03699703.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] gi|224601203|gb|EEG07385.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] Length = 453 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 82/276 (29%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG VG + + L +G +++DCG+ F + + E Sbjct: 1 MRITFLGAVGTVTGSKFLVEHG----GSRVLVDCGL-FQGFKQL----RLRNWARLPFEP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK-------- 116 L A+ +THAH DH G L L PVYAS L E + Sbjct: 52 ARLDAVVLTHAHLDHSGYLPLLVREGFAGPVYASEATCALAEILLPDSGHLQEEEAEYAN 111 Query: 117 -----------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 K + + + H I + I Sbjct: 112 RHGFSKHHPALPLYTLADAERSLKALQMLPWHHAEQVAKGIKVTLHPAGH-ILGAAMVEI 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + ++ +GD D I+ + + L+ +ST R + Sbjct: 171 SAGGVTLLCSGDLGRPHDPIMVP---PERIAR-----ADYLLVESTYGDRRHPPEDTAKV 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 I G L+ +F+ V R +S++ + Sbjct: 223 LAEIIRRTTARHGITLIPSFA--VGRTQSLMYYLYR 256 >gi|206562166|ref|YP_002232929.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] gi|198038206|emb|CAR54159.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] Length = 467 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 129/448 (28%), Gaps = 84/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +G + ++IDCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLVEHG----GRRVLIDCGL-FQGTK----NLRLRNWNPLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAVVLTHAHIDHTGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEAEFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + + H I ++V+ Sbjct: 112 RHGYSKHHPAQPLYTLDDAQRALRLLKPVALDECTTLGGGLAFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ L+ +ST R + Sbjct: 171 HGNHKVLAFSGDLGRYHDPIMQPP--------RPPAHADYLVVESTYGDRLHPASDPENE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG------RKIVLLGSSLKR---- 263 ++D G V++ F+ V R + I+ ++ R V L S + Sbjct: 223 LAMLFDTTFARGGVVVMPCFT--VGRAQEILHYIARLKASGRMARVPVFLDSPMATDVTE 280 Query: 264 -----------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSAL 309 +S A +G + +++IA + G L Sbjct: 281 IYRHHILEHRLTLSEANALGHAATMIQSVDQSKAIAEHHGPMVIIAGSGMATGGRVLHHL 340 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 ++ + + L A+ +E + I V +V E +S Sbjct: 341 SRYAPDVRNTIALVGYQAAGTRGAALAAHEPTV-KIHGEYVRVRAQV-----ESITTLSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ + ++ P HGEP Sbjct: 395 HADYEEILQWLGTMQSAPVCTFITHGEP 422 >gi|190346159|gb|EDK38177.2| hypothetical protein PGUG_02275 [Meyerozyma guilliermondii ATCC 6260] Length = 770 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 83/281 (29%), Gaps = 52/281 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ F LGG E+G + + Y K IM+D GV PG + + Sbjct: 5 DDNFRFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGV------HPGYAGLSSLPFYDE 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + + I+H H DH +L + + V+ + + Sbjct: 55 YDLSKVDILLISHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVRVTSIGG 114 Query: 110 --------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + + ++V + H + Sbjct: 115 GGDSRLNSGNETATSSNLYTDDDLIRSFDRIETIDYHSTIEVEGIRFTAYHAGH-VLGAC 173 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + ++ TGD+ ++D L + + L+ +ST Sbjct: 174 MYFVEIGGLKVLFTGDYSREEDRHLQ-------VAEVPPMRPDILITESTFGTATHEPRL 226 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK + KG ++ + + R + ++ I E+ Sbjct: 227 EKEARMTKIIHSTLLKGGRILMPVFA-LGRAQELLLILEEY 266 >gi|171689890|ref|XP_001909884.1| hypothetical protein [Podospora anserina S mat+] gi|170944907|emb|CAP71018.1| unnamed protein product [Podospora anserina S mat+] Length = 835 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 85/272 (31%), Gaps = 44/272 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 23 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----AALPFFDDFD 74 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 75 --LSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSS 132 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + P I + + H + +I NI Sbjct: 133 NPTTQLVYTEQDHLNTFPQIEAIDYHTTHTISGIRVTPYPAGH-VLGAAMFLIEIAGLNI 191 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNIY 218 TGD+ + D+ + A G+ L+ +ST + E+ + + Sbjct: 192 FFTGDYSREQ--------DRHLVSAQVPRGVKIDVLITESTYGIASHVPRLERE-QALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|45358944|ref|NP_988501.1| beta-lactamase-like protein [Methanococcus maripaludis S2] gi|45047810|emb|CAF30937.1| Beta-lactamase-like:ATP/GTP-binding site motif A (P-loop) [Methanococcus maripaludis S2] Length = 422 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 124/423 (29%), Gaps = 74/423 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + I+IDCG+ + LP + ++ A+ Sbjct: 8 GGCHQIGKSCVEI----NTKKSKILIDCGMDPSDNGLPDI------------NDSDVDAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------------KRVYERVSKKIP 119 ++HAH DH GA+ ++ +P L+ K + S + Sbjct: 52 VVSHAHLDHCGAIPYF--NFK-KIFCNPPTADLMYNVWKDTVSLSKTYKEEDIKKSMDVI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +K ++ H I + +L + +++TGD + L Sbjct: 109 KTVNYREEKQVTSDIKMKMYDAGH-ILGSSSLYLDIDGKKLLYTGDINEIETRTL----- 162 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I ++ +ST + K ++K + D + G V++ F+ Sbjct: 163 --RAADTDFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDV-----GIIKKD 277 V R + II + G G + + + I Sbjct: 219 VGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMGYSDWLNPKIKNAIENRINPF 278 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + +I+ +G L+ L + + + Sbjct: 279 GNLIKGGDEVFSREPCIIISTSGMVQGGPVLQYLSLLKNPRNKIILTGYQAEGTIGRSLE 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGE 394 G + + + S H N L R + I +P + +HGE Sbjct: 339 EG--------ATEVKPFKRAIPVNGKVVKIEFSAHADYNSLLRFMKKIPQPDKAIVMHGE 390 Query: 395 PLH 397 Sbjct: 391 RYQ 393 >gi|294793016|ref|ZP_06758162.1| putative metallo-beta-lactamase domain protein [Veillonella sp. 6_1_27] gi|294794944|ref|ZP_06760079.1| putative metallo-beta-lactamase domain protein [Veillonella sp. 3_1_44] gi|294454306|gb|EFG22680.1| putative metallo-beta-lactamase domain protein [Veillonella sp. 3_1_44] gi|294455961|gb|EFG24325.1| putative metallo-beta-lactamase domain protein [Veillonella sp. 6_1_27] Length = 391 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 72/393 (18%), Positives = 140/393 (35%), Gaps = 45/393 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--VSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 G +IG + S IM+D G +S + P ++L DI + K + + Sbjct: 8 GTHQIGGSAIEISTASTC----IMLDFGNELSLDEKYTP-INL---DIDGVTKGKPDCDG 59 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP---CISFQAGD 127 I I+H H DH G L VP+Y + + Y+ + +F+ G+ Sbjct: 60 IVISHYHMDHLGQLTSTIP--DVPLYMGELSKEIALIGAEYQDKDLYLRLLGANTFRGGE 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 +G I + ++HS ++ V+ + I++TGD+++ D L Sbjct: 118 AFSIGDIRIRPLVIDHSAIDSYMFVVEAGGKRILYTGDFRMHGLRHHV----LDKLVNTY 173 Query: 188 NEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + L+ + T+ R+ CISE + +I +++ K V V S+++ RI I Sbjct: 174 IGEVDVLITEGTSLSRDADDCISEAAVLDDISSYIQDGK-YVFVMCSSTNIDRIMGIWQN 232 Query: 247 AEQIGRKIVLLGS-----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I ++ V + L + + Y E V Sbjct: 233 MPTDKVLICDAYQKRILDTVINNVYYESSLYRRHDSPLVIDKGMYPKYYMEHGFVSLVRG 292 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 S + + + + +I+S E ++ + Sbjct: 293 TENFISKIKEFPKDD---------VRIIYSMWIGYIEENLALK----------ELLDTYS 333 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 H SGH +DL + + + P +++ +H + Sbjct: 334 SYICHASGHVSKDDLVQFIEMVDPDIVIQVHTD 366 >gi|256851904|ref|ZP_05557292.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 27-2-CHN] gi|260661835|ref|ZP_05862745.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 115-3-CHN] gi|282931855|ref|ZP_06337336.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|297205529|ref|ZP_06922925.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16] gi|256615862|gb|EEU21051.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 27-2-CHN] gi|260547304|gb|EEX23284.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 115-3-CHN] gi|281304018|gb|EFA96139.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|297150107|gb|EFH30404.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16] Length = 427 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 140/443 (31%), Gaps = 79/443 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD---LPGVDL 53 ++ G+ IG M Y ++ D G ++ P + L L Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELNLPDESYQTLIKYQL 59 Query: 54 V--FPDI-------TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 + PD + E+ A +I+H H DH AL+ L VP+YA P L Sbjct: 60 IGDVPDFYDPAITGKQLNHEKWEHAAAYISHLHLDHSKALNLLAPE--VPLYAGPITAAL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L + I + + VG ++E +H LV+++ Sbjct: 118 LPVLNKNGDFLLPAANHEKNYTRSIIPAKYKTPIKVGDITLEVWPSDHDAYGATGLVVKT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE----- 210 P I TGD +L + + + + T E Sbjct: 178 PDKLIAFTGDIRLHGYHPEWVKEYLSA-----VKNADLFIVEGTGISWPEHIGQEFSGPK 232 Query: 211 --KGIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 + + I + +N + + T+ ++V R+ II+ S ++VV Sbjct: 233 NEDELTERIVQLEQENPQRQITFNTYPTNVERLLRIIEE-------------SPRKVVLH 279 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK------ 321 A ++K + D + P E+ + L + + + Sbjct: 280 AKRADLLK--ESLNKDYYYYYLPGEEKYKSLDPNLKISYQDL---LKDNHKYLWQAVANY 334 Query: 322 ---LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + + ++ + + A L Q + A + SGH +L+ Sbjct: 335 GDLMKNGLYIHSNAEPLGDFDPAYKPFVEALERQNIEFTA------LRCSGHADDKELRE 388 Query: 379 MYQWIRPQVLVAIHGEPLHLVAH 401 + ++P++L +H L + Sbjct: 389 IIGLVQPRILCPVHTLHPELAEN 411 >gi|225561321|gb|EEH09601.1| endoribonuclease ysh1 [Ajellomyces capsulatus G186AR] Length = 903 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSHIEAIDFNTTHTINNIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G + L+ +ST + E+ I Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGVKVDVLITESTFGVSSNPPRLERE-AALI 241 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 KSITSILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|58270576|ref|XP_572444.1| hypothetical protein CNH02710 [Cryptococcus neoformans var. neoformans JEC21] gi|134118056|ref|XP_772409.1| hypothetical protein CNBL2750 [Cryptococcus neoformans var. neoformans B-3501A] gi|74683818|sp|Q5KCZ0|YSH1_CRYNE RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|50255022|gb|EAL17762.1| hypothetical protein CNBL2750 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228702|gb|AAW45137.1| hypothetical protein CNH02710 [Cryptococcus neoformans var. neoformans JEC21] Length = 773 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 43/232 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LG E+G + + + K I+ D G+ PG+ P I + Sbjct: 29 LTITMLGAGQEVGRSCCVIEH----RGKKIVCDAGL---HPAQPGI-GALPFIDELD--W 78 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLL-EAKRVYERVSKKIP 119 + A+ ITH H DH AL + + VY + + R++ + P Sbjct: 79 STVDAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNP 138 Query: 120 CI-------------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 D V G H + +I I Sbjct: 139 DTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAGH-VLGASMFLIEIAGLKI 197 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 ++TGD+ ++D L + I ++C+ST + EK Sbjct: 198 LYTGDYSREEDRHLV-------MAEIPPVKPDVMICESTFGVHTLPDRKEKE 242 >gi|115397403|ref|XP_001214293.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192484|gb|EAU34184.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 870 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDVLLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I V + I H + ++ N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFNTTHTVNSIHITPFPAGH-VLGAAMFLVSIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPKGVKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 243 SITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|315650873|ref|ZP_07903916.1| beta-lactamase domain protein [Eubacterium saburreum DSM 3986] gi|315486852|gb|EFU77191.1| beta-lactamase domain protein [Eubacterium saburreum DSM 3986] Length = 382 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 106/314 (33%), Gaps = 42/314 (13%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++++F+PLGG +G + G + I++D G+ G PD F++ Sbjct: 2 QQDIIFIPLGGGQRVGASCYYLKVGDAN----IILDAGIGIDDGLEFG-----PDFHFLI 52 Query: 63 -----KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK 116 + + IFI+HAH DH G L L +H VY + L E + Sbjct: 53 RTPFIQSMAQINNIFISHAHMDHVGYLLKLMKETVHANVYMTEITRVLSEYQLYDRLFIG 112 Query: 117 KIPCISFQ--------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 K + + +D G + H IP M ++ + I++ Sbjct: 113 KEQDENIRLAARSLLEQIATVSFMQTIDFGRYKATFYPAGH-IPGAMMILFETGKKRILY 171 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ L+ A+ + I ++ +A + K ++ Sbjct: 172 TGDYSLNHTALTQGCMIPKDI------KIDTVIICGLHAKHPDYIKKADAMYKQAGFVLH 225 Query: 223 NAKG-----CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD 277 G + S + I+ + D + G I + S + V+ + + Sbjct: 226 YVGGGHQSLMCQIPQLSKGIEFIKKLNDW-NKSGIPIYIDQSIMNMVIKMEKLSVPVLNK 284 Query: 278 QLFLSDESFGLYPR 291 + + L P Sbjct: 285 YNRVMGDEKPLMPH 298 >gi|159487337|ref|XP_001701679.1| predicted protein [Chlamydomonas reinhardtii] gi|158280898|gb|EDP06654.1| predicted protein [Chlamydomonas reinhardtii] Length = 460 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 73/457 (15%), Positives = 142/457 (31%), Gaps = 67/457 (14%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN- 67 LP G ++G + + + +M DCG F D FP+ ++ Sbjct: 3 LPAGAGQDVGRSCCIVRMAGRT----VMFDCGAHFGFRDA----RRFPEFG-LLSRAGRF 53 Query: 68 ---LMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE------RVSK 116 + A+ ITH H DH GAL PV + + R + Sbjct: 54 TELIDALVITHFHIDHIGALPYFTEVCGYRGPVLMTYPTFAMAPIMLEDYVKVNADRPGE 113 Query: 117 KIPCISFQAGDKVD-------------VGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 +P D + S H + + + + ++T Sbjct: 114 VLPYTEQHVRDCLRRVTAVDLHQVVAVAPGLSFTFHYAGH-VLGAAMVTMTAGHLTALYT 172 Query: 164 GDWKLDDDAILGDVTDKDSLCAIG---NEGILALMCDSTNA--MREGTCISEKGIKKNIY 218 GD+ D LG L+ ++T A +R+ E+ + + + Sbjct: 173 GDFNSAPDRHLGSAELAAGGAGPAGCLMREPDVLISEATYAASLRDSKRGRERDLLQAVE 232 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSII----DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 D + A G VL+ TF+ + R + ++ D + G + + SS ++ ++ Sbjct: 233 DTVA-AGGKVLIPTFA--MGRAQELLMLLADCWRRKGLTVPIYFSSAMASRALTYYQLLL 289 Query: 275 KKDQLFLSDESFGLY-------PREQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLAE 324 + P ++ ++ A G P + + +S R + Sbjct: 290 NWTNANVRKAVEADVYGMFRTRPWDRSLLQAPGPAVLFASPGNITSGVSLEAFRAWAGSS 349 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNR---LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 ++ V+ + + G + NR + S H L + + Sbjct: 350 RNLVVLAGYQVRGEWGG--RLTNRSWSQAHAHAHAQVRCRVKMLAFSAHADLRGLMGLVR 407 Query: 382 WIRPQVLVAIHG-----EPLHLVAHKELALQEGIACV 413 RP+ +V +HG E L L ++ Sbjct: 408 RCRPRAVVLVHGQREPMEFLRGRIEATLGIECHAPPT 444 >gi|254500085|ref|ZP_05112237.1| metallo-beta-lactamase superfamily protein [Labrenzia alexandrii DFL-11] gi|222441383|gb|EEE48061.1| metallo-beta-lactamase superfamily protein [Labrenzia alexandrii DFL-11] Length = 341 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 84/281 (29%), Gaps = 52/281 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L LGGVG + + L ++ I++DCG+ F + + Sbjct: 1 MDLSITFLGGVGTVTGSKYLLE----TNGLRILVDCGL-FQGYKQL----RLRNWAALPV 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 E ++ A+ +THAH DH G + L PV + L E Sbjct: 52 EPVSIDAVILTHAHLDHSGYVPLLIRNGFKGPVICTQGTKDLCEILLPDSGFLQEKDADF 111 Query: 110 ------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 S + +G ++ H I + Sbjct: 112 ANRHGYSKHQPALPLYTKKDAEKSLESFQTVAFDTPHDVLGKLTVCFKCAGH-ILGAAIV 170 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 + IV +GD + D + L+ +ST R + + Sbjct: 171 EVSIKGRKIVFSGDLGR---YGDATMLDPAPIRE-----ADYLLVESTYGNRLHEALEPE 222 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 I G V++ F+ V R +SI+ ++ + Sbjct: 223 EILAEAISTTARRGGTVIIPAFA--VGRAQSILLHIHRMKK 261 >gi|320032162|gb|EFW14117.1| cleavage and polyadenylation specificity factor [Coccidioides posadasii str. Silveira] Length = 881 Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFNCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDVLLVSHFHLDHSAALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLPLIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLVS-------AEVPKGIKIDVLIAESTFGISSNPPRLERE-TALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 243 SVTSVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|119185911|ref|XP_001243562.1| hypothetical protein CIMG_03003 [Coccidioides immitis RS] Length = 881 Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFNCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDVLLVSHFHLDHSAALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLPLIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLVS-------AEVPKGIKIDVLIAESTFGISSNPPRLERE-TALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 243 SVTSVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|303323846|ref|XP_003071912.1| metallo-beta-lactamase superfamily protein [Coccidioides posadasii C735 delta SOWgp] gi|240111619|gb|EER29767.1| metallo-beta-lactamase superfamily protein [Coccidioides posadasii C735 delta SOWgp] Length = 881 Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFNCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + V+ + + + Sbjct: 72 FDLSTVDVLLVSHFHLDHSAALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLPLIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLVS-------AEVPKGIKIDVLIAESTFGISSNPPRLERE-TALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 243 SVTSVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|303243615|ref|ZP_07329957.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] gi|302486176|gb|EFL49098.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus okinawensis IH1] Length = 422 Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 73/431 (16%), Positives = 143/431 (33%), Gaps = 79/431 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F GG +IGM+ + + I++DCG++ + LP + Sbjct: 4 IRFH--GGCHQIGMSCVEI----DTKKSKILLDCGMNPSDNRLPSI------------NP 45 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIP 119 ++ A+ ++HAH DH GA+ +Y + + L+ +K K I Sbjct: 46 SDMDAVVVSHAHLDHCGAVPYF--NFK-KIYCTVPTVDLMYIVWKDISKLSKTYGEKDIK 102 Query: 120 C------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 +K S++ H I + ++ + +++TGD + Sbjct: 103 QAMESIETLNYREEKKITKDISMKLYDAGH-ILGSSSIYLDVDGKKVLYTGDINEIETKT 161 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLV 230 L + I L+ +ST + K ++K + D + G V++ Sbjct: 162 L-------RPADTDIDEIDTLIIESTYGSPMDIKPARKVLEKQLVDEISKTIEKGGKVII 214 Query: 231 TTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLF--- 280 F+ V R + I+ I + + G SL V + ++ Sbjct: 215 PVFA--VGRAQEIMAIISNYMRSGLLKNVPVYVDG-SLIHATGVYLSYSEWLNPKIRNGL 271 Query: 281 ---------LSDESFGLYPREQLIVIATGS----QGEPRSALAQLSRGEMRNVKLAEKDT 327 + + + +E ++ + S G L L + + + + Sbjct: 272 ENRINPFGDVKKANRQIIDKEDSCIVISTSGMVQGGPVLQYLKLLKDPKNKIILTGYQAE 331 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQ 386 + G I KN+L G V + S H N L R + I +P+ Sbjct: 332 DTLGRQLEEG-AKEITPFKNKLPINGEVV-------KIEFSAHGDYNSLIRYLKKIPKPK 383 Query: 387 VLVAIHGEPLH 397 + +HGE Sbjct: 384 KVFVMHGERYQ 394 >gi|19881000|gb|AAM00627.1| unknown [Legionella pneumophila] Length = 470 Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 79/460 (17%), Positives = 130/460 (28%), Gaps = 81/460 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + ++ LG + + L GS K I+IDCG+ F +L + Sbjct: 13 LNGGKMKLTFLGATETVTGSKYLLTIGS----KKILIDCGL-FQGYK----ELRLRNWAP 63 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VY 111 + + ++ A+ ITHAH DH G L L +Y +P L Sbjct: 64 LPIDPHDIDAVIITHAHIDHSGYLPLLVKNGFQGKIYTTPGTKALCSILLPDSGHLQEEE 123 Query: 112 ERVSKKIPCISFQA-----------------------GDKVDVGAFSIESVRVNHSIPET 148 R++ K + FS E R H I Sbjct: 124 ARLANKYGFSKHKPALPLYTEKEAQTALNYFETIDFDTPHQLFHDFSFEYHRAGH-IVGA 182 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + I++ G+IV TGD D + L+ +ST R Sbjct: 183 AMVKIKTQKGSIVFTGDIG--------RPYDPVMKAPAFIQETDYLVMESTYGDRLHDAT 234 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 + + G V++ F+ V R +S++ ++ R+ + K + Sbjct: 235 DPLPQMAQVINQTVKRGGSVIIPAFA--VGRAQSLLYFIYELKRQGAIP----KNIPVFL 288 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIA--------------TGSQGEPR-----SAL 309 I L + + EQ + P+ S + Sbjct: 289 DSPMAIDATHLLCTYKEDHHLTAEQCQGLCRIATYVNTPEESKEIDRHHMPQIIIAASGM 348 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-- 367 AQ R A I N + + V V Sbjct: 349 AQGGRILHHLKVFAPDPKSTLLFTGFQAGGTRGARIVNGERQVKIHGSLIPIRAQVVVMS 408 Query: 368 --SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKE 403 S H +L + P+ + HGEP + KE Sbjct: 409 STSAHADYQELLGWLKHFARPPKKVFITHGEPHSAQSLKE 448 >gi|227537735|ref|ZP_03967784.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242349|gb|EEI92364.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 458 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 88/281 (31%), Gaps = 53/281 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN ++ LG + + Y + + I+IDCG+ F +L + + Sbjct: 1 MKNNKINIHFLGAASTVTGS----KYLVDTGDRKILIDCGL-FQGLK----ELRLKNWEY 51 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYER 113 + E + + +TH H DH G L L + P+Y + + + + AK + Sbjct: 52 LPVEVSKIDVVLLTHGHLDHTGYLPRLVKQGYNGPIYGTNPTLDIAKIILNDSAKIQEQE 111 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNH------------------------SIPETM 149 ++ + V + ++H I Sbjct: 112 AARANKEGYSKHSPAVPLYDLKDVEKTISHFKGVPQSQWIPLFDGIRARFKYNGHILGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + + V +GD D + + L +ST R Sbjct: 172 FIELDVHGKRFVFSGDIG--------RTNDLLLYPPLKPKKADVLFIESTYGGR--FHPD 221 Query: 210 EKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIA 247 E I ++ + GC+ + +FS +++ ++ Sbjct: 222 EVEAIPQIEKLVNDTINRGGCLFIPSFSVERAQLMMLVFWT 262 >gi|332799023|ref|YP_004460522.1| beta-lactamase domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696758|gb|AEE91215.1| beta-lactamase domain protein [Tepidanaerobacter sp. Re1] Length = 831 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 74/520 (14%), Positives = 161/520 (30%), Gaps = 102/520 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L+F GG E+G + L K I++DCG+ PD I + Sbjct: 1 MKLIFC--GGAQEVGASCYLV----TIDGKNILLDCGIRLTSSKDT-----LPDFRLIQE 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL--------LEAKRVYERV 114 + AI I+HAH DH GAL + + +Y + + L L+ + Sbjct: 50 NGG-IDAIIISHAHTDHTGALPAISRQFPNALIYMTHMSKDLTRVLLYDSLKIMEREPEI 108 Query: 115 SKKIPCISFQA------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + + H I ++ + G++ + Sbjct: 109 PIYAENHVQEMLGRTVCFSPNFSFKLFSDSNITATFYSAGH-IAGAASIYMVGSEGSLFY 167 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDI 220 +GD + T + + +ST + + E+ + ++I ++ Sbjct: 168 SGDISGFRQNTIEGAT-------VPKLRPDVAIFESTYGDKLHANRQVEEQRLIESINEV 220 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR--VVSVAIDVGIIKKDQ 278 + N G VLV F+ + R + +I I ++ + R ++S I V + KD Sbjct: 221 IING-GKVLVPAFA--LGRAQEVILILKKA----------MNRGQLLSCPIYVDGMVKDI 267 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN--VKLAEKDTVIFSSRAIP 336 + + + G ++ ++ E R ++ +I SS + Sbjct: 268 CRIYKLNPNYLRSNLAKKVFRGVDIFYDDNVSPVANPEFRKEILESKNPCVIIASSGMLT 327 Query: 337 G------------NE----------------VAIGHIK------NRLVEQGV-----RVI 357 G NE + I ++ ++ + + Sbjct: 328 GGPSQMYAQSLATNENNLIAVTGYQDEESPGKDLLKIIETDDDADKKQDRTIKLGEREIS 387 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 + +S H ++ + + P+ + +HG P + + + ++ + R Sbjct: 388 VKCRVGKFGLSAHADKMEILNIANNLYPRRIFLVHGNPEAINSLGKEIQKDINGFIYAPR 447 Query: 418 NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 NG+ + + + I + Sbjct: 448 NGEQYEINIKKPRKQRGI---SKYPNMKRNEPLTQESIKE 484 >gi|302679538|ref|XP_003029451.1| hypothetical protein SCHCODRAFT_59058 [Schizophyllum commune H4-8] gi|300103141|gb|EFI94548.1| hypothetical protein SCHCODRAFT_59058 [Schizophyllum commune H4-8] Length = 786 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 132/428 (30%), Gaps = 62/428 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITFIM 62 L LG E+G + + Y + I+ D G+ + P +D D+ + Sbjct: 7 LKITMLGAGQEVGRSCCVLQY----RGRTIVCDTGIHPAHTGMASLPFID----DLDW-- 56 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEAKRVYE----- 112 + AI ITH H DH +L + + +Y + L + Sbjct: 57 ---STVDAILITHFHLDHAASLTYITEKTNFRDGKGKIYMTHPTKALHKFMMQDFVRTGS 113 Query: 113 ---RVSKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNI 160 IS + V S H + +I I Sbjct: 114 SSSDALFSPLDISMSLASIIPVSAHQLITPCPGVSFTPYHAGH-VLGACMFLIDMAGLRI 172 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 ++TGD+ ++D L + L+ +ST ++ EK ++ N+ Sbjct: 173 LYTGDYSREEDRHLVK-------AELPPIRPDVLIVESTYGVQSHEPRDEKELRFTNLVH 225 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVG 272 + G VL+ F+ + R + ++ I ++ + S L R Sbjct: 226 SIIRRGGHVLLPQFA--LGRAQELLLILDEYWKKHPDLHNVPIYYASGLARKSMAVYQTY 283 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQ----GEPRSALAQLSRGEMRNVKLAEKDTV 328 I + S + P IA G P SR ++ + Sbjct: 284 IHTMNSNIRSRFAKRDNPFVFKCKIAEGPPCVVLATPGFMQTGSSRELFELWAPDSRNGL 343 Query: 329 IFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 I + ++ G + + +G + + + + S H + +R Q Sbjct: 344 IVTGYSVEGTLARDIMTEPEEFQSVKGHMIQRKISVDYISFSAHVDYTQNAEFIETVRAQ 403 Query: 387 VLVAIHGE 394 +V +HGE Sbjct: 404 HVVLVHGE 411 >gi|257870971|ref|ZP_05650624.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257805135|gb|EEV33957.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 430 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 125/339 (36%), Gaps = 34/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L +P+Y +L+A +E + Sbjct: 87 AVFLSHAHLDHSKMVNYL--DPAIPLYTLKETKAILKALNRTGDFLIPTPHEAPAFVREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + VG +E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLEPHDVIKVGEIEVEIVPVDHDAYGAAALLIRTPDHFIAYTGDLRL-HGYHPERTKEF 203 Query: 181 DSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK-GCVLVTTFSS 235 L + EG+ + + SEK + ++++ + + + Sbjct: 204 CQLAKHTDLLMMEGVSISFPERESDPDTIEVASEKELVAAFVELVEKNPQRQITFNGYPA 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V R +++D + + ++L + + + L++ L + + Sbjct: 264 NVERFLALVDACPRT-IVLEAHQAALLKEIFDREVPYYTVEGGASLAELDPALEIDYRSL 322 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + TG + + L I S ++ + + A L + + Sbjct: 323 CVDTGQY---------VWQAVDHFENLQPGSLYIHSDAQPLGAFDPAYEEFLALLAKLEI 373 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + VSGH P DL ++ WI P+ LV IH Sbjct: 374 EFV------RLPVSGHAVPEDLDQIIAWIEPKRLVPIHT 406 >gi|171915158|ref|ZP_02930628.1| Ysh1p: subunit of polyadenylation factor I, putative [Verrucomicrobium spinosum DSM 4136] Length = 451 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 74/462 (16%), Positives = 145/462 (31%), Gaps = 71/462 (15%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 EIG N L G R+ I++D G + PK+ G D P+ + + +I +T Sbjct: 10 REIGANSYLIENG----RQRIILDAG-AHPKEK--GHDS-LPNFNSVPH--DTVNSILVT 59 Query: 75 HAHEDHYGALHDL-WSFLHVPVYASPFA----IGLLEA------KRVYERVSKKIPCISF 123 HAH DH GAL L PVY + +L ++ E+ + P + Sbjct: 60 HAHHDHIGALPVLQRRQPRTPVYMTEPTGEVGAAMLHNSVNVMTRQREEQGIHEYPLFTH 119 Query: 124 QAGDKVD--------VGAF-------SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + D + F H I + ++IR +TGD Sbjct: 120 KEIDGIKGRWNYRDLRRPFLLPDSEVECTFFDAGH-IIGSAGIMIRHEGKTAFYTGDVNF 178 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK----NIYDIMKNA 224 + GI L+ ++T + + +K + + Sbjct: 179 ESQT-------IAREADFPTTGIDTLIIETTRGDFQRPADFSRKAEKERLAQVIRETFDK 231 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSV---------- 267 G V++ F+ + + + ++ + ++ + + G S K V Sbjct: 232 GGAVMIPVFA--LGKSQELLVMLHELHQMDLIPNAPVFIGGLSTKMTVLYDSYASKTRRS 289 Query: 268 AIDVGIIKKDQLFLSDESFGL---YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAE 324 I++ ++ Y + +++G E ++ R Sbjct: 290 YEGFRILEDMDTLVAPRKRRKELLYNPRTIYALSSGMMSEGTTSNQFAMRFMDNPKNTIA 349 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR 384 + A K +L Q V S H D+ + Sbjct: 350 FVGYTDPATPGYRIRNAKQGEKIKLDSQLPEVPLLCRVASFDFSAHAVREDIVSYVTKVS 409 Query: 385 PQVLVAIHGE-PLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 P+ ++ +HG+ P H+ L+ + + G+ + L+ Sbjct: 410 PRKVLLVHGDAPAQAWFHQTLSAALPQSEIISPEPGETISLW 451 >gi|323341591|ref|ZP_08081824.1| hypothetical protein HMPREF0357_10004 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464016|gb|EFY09209.1| hypothetical protein HMPREF0357_10004 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 425 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 130/346 (37%), Gaps = 34/346 (9%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV---------SKKIPC 120 A+F++H H DH ++ L +P+YA LL + S Sbjct: 88 AVFLSHCHLDHTRMVNYL--DPKIPMYALKETKVLLNSLNAQNDFILPRAKTSDSFTRDI 145 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK---LDDDAILGDV 177 I D ++VG +E RV+H L+I +P +I +TGD + D + L Sbjct: 146 IGCDNHDVIEVGDIKVELSRVDHDAYGACGLLITTPDMHIAYTGDLRLHGFDVEDSLHYC 205 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTTFSSS 236 + + EG+ A G +E + K I +I+ N V + ++ Sbjct: 206 EQAKNTDMLIIEGVSISFPQEDRA--TGRIETEADLLKKIVNIVNSNPTKQVTFNCYPAN 263 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 V R+ +I Q R++VL S ++ +++ + + + + Sbjct: 264 VKRL---AEIVRQSPREVVLEA-SFANILKECLNMECKYYNTNDNNFNLDKNLEVDYNTL 319 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I + L Q+ N+K V S A P E ++ + + + Sbjct: 320 I-----EDEGDYLWQVV-DHHENLK---GGGVYIHSDASPLGEFDPAYLPFIQLLKDCDI 370 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + SGH YP DL R+ I+P++LV IH L+ +K Sbjct: 371 EFN----RIACSGHAYPEDLDRIVGLIQPKLLVPIHSLRPDLLENK 412 >gi|26990009|ref|NP_745434.1| metallo-beta-lactamase family protein [Pseudomonas putida KT2440] gi|24984930|gb|AAN68898.1|AE016521_7 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 455 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 133/443 (30%), Gaps = 82/443 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG G + + + +++DCG+ F + P + L A Sbjct: 6 LGGTGTVTGS----KFLLTRDSTRVLVDCGL-FQGFKQLRLRNWQPLPPALRA----LDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RVSKKIPCI 121 + +THAH DH G L L P+YA+P L E A+ E + + Sbjct: 57 VVLTHAHLDHSGYLPVLVREGYRGPIYATPATCALAEILLLDSARLQEEQAEHANRHGYS 116 Query: 122 SFQAGDKVD-----------VGAFSIE-----------SVRVNHSIPETMALVIRSPVGN 159 + ++ +R I + I + Sbjct: 117 KHAPAQPLYTEQDAKRALALFRPVALHQVTMIAEGMELLLRTAGHILGAATVQISAEGQT 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIY 218 ++ +GD + + L+ +ST R+ S E+ + K I Sbjct: 177 VLFSGDLGR-PQDPIMRAPELVRTA-------DVLLIESTYGDRQHPAESTEQYLAKVIN 228 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------------------IVLLG 258 + + G LV +F+ V R + ++ + R + Sbjct: 229 ETLLRH-GITLVPSFA--VGRAQLLMYYLYTLKRDRLIPDIPIYLNSPMATDATALYQQY 285 Query: 259 SSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S R+ + + + RE ++IA L L Sbjct: 286 RSEHRLTAAECAAMCRGTHIVRTVDESRHLDQLREPAVIIAASGMATGGRVLHHL----- 340 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVA--IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +++++FS G A + + + I ++S H ++ Sbjct: 341 KALAPNPRNSILFSGFQAGGTRGADIVAGAHSVRLHGEDVPIRAQVHAMENLSAHADADE 400 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 + + P+ IHGEP Sbjct: 401 IMEWLRGFTRPPRQTYVIHGEPH 423 >gi|148547684|ref|YP_001267786.1| beta-lactamase domain-containing protein [Pseudomonas putida F1] gi|148511742|gb|ABQ78602.1| beta-lactamase domain protein [Pseudomonas putida F1] Length = 455 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 133/443 (30%), Gaps = 82/443 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG G + + + +++DCG+ F + P + L A Sbjct: 6 LGGTGTVTGS----KFLLTRDSTRVLVDCGL-FQGFKQLRLRNWQPLPPALRA----LDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RVSKKIPCI 121 + +THAH DH G L L P+YA+P L E A+ E + + Sbjct: 57 VVLTHAHLDHSGYLPVLVREGYRGPIYATPATCALAEILLLDSARLQEEQAEHANRHGYS 116 Query: 122 SFQAGDKVD-----------VGAFSIE-----------SVRVNHSIPETMALVIRSPVGN 159 + ++ +R I + I + Sbjct: 117 KHAPAQPLYTEQDAKRALALFRPVALHQVTMIAEGMELLLRTAGHILGAATVQISAEGQT 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIY 218 ++ +GD + + L+ +ST R+ S E+ + K I Sbjct: 177 VLFSGDLGR-PQDPIMRAPELVRTA-------DVLLIESTYGDRQHPAESTEQYLAKVIN 228 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------------------IVLLG 258 + + G LV +F+ V R + ++ + R + Sbjct: 229 ETLLRH-GITLVPSFA--VGRAQLLMYYLYTLKRDRLIPDVPVYLNSPMATDATALYQQY 285 Query: 259 SSLKRVVSVAIDVGIIKKDQ-LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S R+ + + + RE ++IA L L Sbjct: 286 RSEHRLTAAECAAMCRGTHIVRTVDESRHLDQLREPAVIIAASGMATGGRVLHHL----- 340 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVA--IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +++++FS G A + + + I ++S H ++ Sbjct: 341 KALAPNPRNSILFSGFQAGGTRGADIVAGAHSVRLHGEDVPIRAQVHAMENLSAHADADE 400 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 + + P+ IHGEP Sbjct: 401 IMEWLRGFTRPPRQTYVIHGEPH 423 >gi|295135245|ref|YP_003585921.1| metallo-beta-lactamase superfamily protein [Zunongwangia profunda SM-A87] gi|294983260|gb|ADF53725.1| metallo-beta-lactamase superfamily protein [Zunongwangia profunda SM-A87] Length = 458 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 65/450 (14%), Positives = 135/450 (30%), Gaps = 79/450 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N ++ LG G + + L + + I+IDCG+ F +L + + Sbjct: 1 MDNNKINIHFLGAAGTVTGSKYLV----DTGDRKILIDCGL-FQGLK----ELRLKNWEY 51 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VY 111 ++ A+ +TH H DH G L L + P+Y + + + + Sbjct: 52 PPVNVGDIDAVLLTHGHMDHTGYLPRLVKQGFNGPIYGTNPTLDIAKIILNDSAKIQEQE 111 Query: 112 ERVSKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPET 148 + K + + H I Sbjct: 112 AERANKEGYSKHSPAEPLYDLKDVEKTIPHFKGIPQSQWIPLFDGIRARFQYNGH-ILGA 170 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + + V +GD D + + L +ST R Sbjct: 171 TYIELDVHGKRFVFSGDIG--------RTNDLLLYPPLKPKKADVLFIESTYGGR--FHP 220 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV--------LL 257 E I ++ + G + + +FS +++ +I +KI + Sbjct: 221 DEIEALPQIEKLVNDTINRGGSLFIPSFSVERAQLMMVIFWKLLKEKKIPKVRMIMDSPM 280 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY-PREQLIVIATGSQGEPRSALAQLSRGE 316 G+S+ + D + +++ F + + + + T ++ + A + + G Sbjct: 281 GASVLELFHRTRDWHRLDENECDEMCSHFTVVSSYRETMELRTDNKPKIVIAGSGMLTGG 340 Query: 317 MRNVKL------AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH---- 366 R + +T++F G + E V + V Sbjct: 341 -RMLNYLETQAQNPNNTLLFVGYQAEG--TRGRKLLEGDKELKVYGKWVPFDMEVAEIEG 397 Query: 367 VSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 +S H +L I +P+ + +HGE Sbjct: 398 LSAHADHAELMDWMDKIKNKPERIFIVHGE 427 >gi|121700651|ref|XP_001268590.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Aspergillus clavatus NRRL 1] gi|119396733|gb|EAW07164.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Aspergillus clavatus NRRL 1] Length = 878 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 21 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----SALPFFD--E 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKR----------- 109 + + + I+H H DH AL + S + V+ + + + Sbjct: 71 FDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTAS 130 Query: 110 ----------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +S + + + I H + ++ N Sbjct: 131 SSDQRTTLYTENDHLSTLPLIETIDFNTTHTINSIRITPFPAGH-VLGAAMFLVSIAGLN 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 190 ILFTGDYSREEDRHLIP-------AEVPKGIKIDVLITESTFGISTNPPRLERE-AALMK 241 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I E+ Sbjct: 242 AITGVLNRGGRVLMPVFALGRAQELLLILEEY 273 >gi|311748141|ref|ZP_07721926.1| metallo-beta-lactamase family protein [Algoriphagus sp. PR1] gi|311302752|gb|EAZ80876.2| metallo-beta-lactamase family protein [Algoriphagus sp. PR1] Length = 466 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 74/465 (15%), Positives = 126/465 (27%), Gaps = 107/465 (23%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------------SFPKDDLPG 50 ++ LGG G + + L G ++DCG+ FP +P Sbjct: 1 MDVTVKFLGGAGAVTGSKYLIDLGDFE----FLVDCGLYQGAKNLRKRNWDKFP---MPP 53 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA-- 107 D+ AI +THAH DH G L L P+Y + L + Sbjct: 54 TDM---------------EAIILTHAHLDHVGYLPKLVKQGFKGPIYCTEATAELAKILL 98 Query: 108 ----KRVYERVSK------------------------KIPCISFQAGDKVDVGA-FSIES 138 K E + Q + S+ Sbjct: 99 LDSGKLQEEEAEYARKKGYSRHESPEPLYTRDDAESVFPQLVPQQFETPFQINPNVSVTY 158 Query: 139 VRVNHSIPETMALVIRSPVGN---IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM 195 H + + VI +V +GD D IL T L Sbjct: 159 YHAGHILGAAIVKVIVKGDTQEKKLVFSGDLGRYHDPILYPPTRI--------PKADILW 210 Query: 196 CDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---- 250 +ST R +E+ + + I D G V++ F+ + R + ++ Q+ Sbjct: 211 IESTYGDRVSPPVKAEEELGRAIRDTFDR-DGLVIIPAFA--LGRTQLVMYYLYQLMEKG 267 Query: 251 ---GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR- 306 I L + +D + L +E L+ QL + Sbjct: 268 KIPKVPIFLDSPMAINATKLYLDYKNDHQLTACLEEEDHHLFDHPQLHYFRKQEESRSLN 327 Query: 307 -----------SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 S +A R + + + E + Sbjct: 328 EYRGNAIIISASGMATGGRVLHHLFHHLPNEKNSVIFVGYQAYGTRGRRLVDGENEVRIY 387 Query: 356 VIAEDAECPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 + ++ +S H +L + RP++ IHGE Sbjct: 388 GREVPVKAKIYQIDGLSAHADQEELMDWAEGFTDRPKITFIIHGE 432 >gi|329667921|gb|AEB93869.1| hypothetical protein LJP_1550c [Lactobacillus johnsonii DPC 6026] Length = 433 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 75/432 (17%), Positives = 139/432 (32%), Gaps = 72/432 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKD---DLPGVDLV--FPDIT 59 G+ IG M Y + ++ D G + + L L+ P+ Sbjct: 14 GLTTIGGPMIEVAY----DKSHVLFDLGEVYRPELGLKMEDENFSTLLKYQLIGDVPNFY 69 Query: 60 FIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY- 111 K + A +I+H H DH A++ L +P+YA P LL Sbjct: 70 DPKITGKEIDHERWQNSAAYISHLHLDHSKAMNLLAP--DIPLYAGPLTAALLPVLNRDG 127 Query: 112 --------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + P I+ + + VG ++ V +H L+I++P IVHT Sbjct: 128 EFLLPAADKPKNYTRPIIAAKLNQPIKVGDITLTVVPSDHDAYGATGLIIKTPDKTIVHT 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + + G D + L+ + T + K + + ++ Sbjct: 188 GDIR-----LHGYHPDWVRQFMAAGKECDMLIIEGTGVSWPERSEEDSEEFKGVKNEVEL 242 Query: 224 A-----------KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS--SLKRVVSVAID 270 K + T+ ++V RI II RK+VL L ++ Sbjct: 243 TERVVKYQKDNPKRQLTFNTYPTNVERILRII---SDSPRKVVLHAKRAELLKLALKQDV 299 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + L Q + Q+ + L + I Sbjct: 300 PYYYLPEDEKIDALDPNLEVSYQ------DLLKDDHQYFWQVVGHYDQ---LQKGGLYIH 350 Query: 331 S-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 S + + + A + ++G+ +I + SGH +LK + P++L Sbjct: 351 SNAEPLGDFDPAYAPFIENIEKRGIELIT------LRCSGHADVAELKEIIAGFEPKILA 404 Query: 390 AIHGEPLHLVAH 401 +H L + Sbjct: 405 PVHTLHPELEEN 416 >gi|11498143|ref|NP_069368.1| mRNA 3'-end processing factor, putative [Archaeoglobus fulgidus DSM 4304] gi|2650088|gb|AAB90702.1| mRNA 3'-end processing factor, putative [Archaeoglobus fulgidus DSM 4304] Length = 407 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 70/412 (16%), Positives = 138/412 (33%), Gaps = 67/412 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG E+G + + IMID GV ++ + P A Sbjct: 7 LGGCREVGRSAVMV--------DGIMIDYGVKPSDPPEFPLNGLSP------------RA 46 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASP----FAIGLLEAKRVYERVSK---------K 117 + ++H H DH G +L + V +P ++ LL + Sbjct: 47 VILSHGHLDHIGVAPNLM-YYDPEVILTPPSHELSMILLRDSMKIMHPPPFTKRELRQFE 105 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD- 176 + + + VG + +E H IP + ++ + NI+++GD +L++ +L Sbjct: 106 SNIREVEYEEPITVGDYEVEFFNAGH-IPGSASIHM-RGDVNILYSGDIRLEETRLLEGA 163 Query: 177 VTDKDSLCAIGNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 TD L+ +ST E+ +++ D + G ++ F+ Sbjct: 164 NTDY--------PETDILIVESTYFGTEHPDRKELERAFVESVIDTLDMG-GHAIIPAFA 214 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLK---------RVVSVAIDVGIIKKDQLFLSDES 285 V R + ++ I E+ G + G + + ++ ++ + + Sbjct: 215 --VGRTQEVLMILERYGITPYVDGMGKEVAQVIQRHPDFIRSPKELKRAVRNAIPVEWRQ 272 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 E V+ T A+ +SR + EK ++ + + G + Sbjct: 273 RERVLEEPSAVVTTAGMLNGGPAMFYISR-----LYNDEKSKILLTGYQVEGTNGDMALK 327 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI---RPQVLVAIHGE 394 L V + S H LK + + +V+ IHGE Sbjct: 328 TGMLNLGTRVVKLKMGVEQYDFSAHADDRQLKEYVKRVVDRGAEVVFTIHGE 379 >gi|242013971|ref|XP_002427672.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis] gi|212512102|gb|EEB14934.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis] Length = 572 Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats. Identities = 72/464 (15%), Positives = 143/464 (30%), Gaps = 79/464 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N+ + PLG ++G + L + SF + P + Sbjct: 1 MAND-IKVTPLGAGQDVGRSCILLNF---------------SFISPEGP-----ITNF-- 37 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI 118 + + I+H H DH GAL L + P+Y + + R Sbjct: 38 -------IDCVIISHFHLDHCGALPYLTEMVGYNGPIYMTHPTKAISPILLEDMRKISVE 90 Query: 119 PCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPVGNI 160 + + + V + IR ++ Sbjct: 91 KKGEVNFFTSQMIKDCMKKVITVTLHQSIMVDSQLEIKAYYAGHVLGAAMFWIRVGNLSV 150 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 V+TGD+ + D LG I L+ +ST A R+ E+ K ++ Sbjct: 151 VYTGDYNMTPDRHLGA-------AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVH 203 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLL--------GSSLKRVVS 266 + ++ G VL+ F+ + R + + + E K+ + ++ ++ Sbjct: 204 ECIEKG-GKVLIPVFA--LGRAQELCILLETYWERMNLKVPIYFAVGLTEKANNYYKMFI 260 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLA 323 + I K + + P ++ + P A LS + Sbjct: 261 TWTNQKIRKTFVQRNMFDFKHIKPFDRSYIDQAWPMVVFATPGMLHAGLSLQIFKKWAPN 320 Query: 324 EKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 E + VI + G + K E V + + + S H + ++ Q Sbjct: 321 ENNMVIMPGFCVAGTVGHKILSGQKKIEFENRQIVDVKMSVQYMSFSAHADAKGIMQLIQ 380 Query: 382 WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 + P+ ++ +HGE + ++ QE NG+ + Sbjct: 381 YCEPKNVLLVHGEAAKMEFLRDKIKQEFHINCYMPANGETCTID 424 >gi|303228729|ref|ZP_07315549.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302516603|gb|EFL58525.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 391 Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 72/422 (17%), Positives = 144/422 (34%), Gaps = 48/422 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD-LVFPD---ITFIMKERKNL 68 G +IG + + I++D G D G++ P I + + N Sbjct: 8 GTHQIGGSAVEI----STKTTRIILDMG------DELGLEKYYMPCPLVIDGVTEGTSNC 57 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSKKIPCISFQA 125 + I+H H DH G L + S +P+Y + + + + + + +F Sbjct: 58 DGVLISHYHGDHLGQLKAVLS--DIPIYVGTLSKAIALIPSEHKDSQLYLRLLGANTFSG 115 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G+ +G I + ++HS ++ V+ + I++TGD++L + + L Sbjct: 116 GNVFTIGDIRIRPLVIDHSAADSYMFVVEAEGKRILYTGDFRLHGLRLHC----IEKLIK 171 Query: 186 IGNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 I L+ + T R G ISE + +I + + K V V S+++ RI I Sbjct: 172 NYVGTIDILIAEGTTLSRNQGRTISEAEVLDDITSYVSDGK-YVFVMCASTNIDRIMGIW 230 Query: 245 DIAEQIGRKIVLLGSS--LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + L V+ + K G YP+ + Sbjct: 231 QNLPDDKVLLCDRYQKTILDTVIKSTYYDSRLYKWHDKPLVVDSGAYPQSYMR------- 283 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + +L + + + +K +D V G +K + + Sbjct: 284 -DGFVSLIRCTDTYINKIKFFNRDAVRIIYSMWTGYIKYNESLKKLIDTYPSYI------ 336 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 H SGH +DL + P +++ IH + L + + + ++ Sbjct: 337 --CHSSGHVTTSDLITFIDLVNPDLIIPIHTNSP-----ERLERILPHRNIRILSDKEVF 389 Query: 423 RL 424 + Sbjct: 390 EV 391 >gi|327356883|gb|EGE85740.1| endoribonuclease ysh1 [Ajellomyces dermatitidis ATCC 18188] Length = 887 Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S + V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSQIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGIKIDVLITESTFGVSSNPPRLERE-AALM 241 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 KSITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|58337900|ref|YP_194485.1| hypothetical protein LBA1642 [Lactobacillus acidophilus NCFM] gi|227902934|ref|ZP_04020739.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus acidophilus ATCC 4796] gi|58255217|gb|AAV43454.1| hypothetical protein LBA1642 [Lactobacillus acidophilus NCFM] gi|227869350|gb|EEJ76771.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus acidophilus ATCC 4796] Length = 431 Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 145/442 (32%), Gaps = 73/442 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD---LPGVDL 53 ++ G+ IG M Y ++ D G ++ P + L +L Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELNLPDESYQTLIKNEL 59 Query: 54 V--FPDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 + P+ K + A +I+H H DH AL+ L +P+YA P L Sbjct: 60 IGDVPNFYDPQITGKPIDTERWEHSAAYISHLHLDHSKALNLLAPE--IPLYAGPITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A + P I+ + ++VG ++E +H L+I++ Sbjct: 118 LPALNENGDFLLPAAGHDKNYTRPIIAAEYKKPINVGDITLEIYPSDHDAYGATGLIIKT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK---- 211 P I +TGD + + G D ++G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDWVRDFMKASKGSDMLIIEGTGVSWPEEKHDENSEEF 232 Query: 212 -------GIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + + I + N + + T+ ++V RI II RK+VL Sbjct: 233 TGPKNEVELTEEIVRLQNANPERQITFNTYPTNVERILRII---SDSPRKVVLHAKRAHL 289 Query: 264 VVSVAI---DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 + + DQ + +QL+ + L Q Sbjct: 290 IKESLKEDYPYYYLPDDQRYEDLNPELEVDYDQLL-------ADKSKYLWQAVSDYD--- 339 Query: 321 KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 KL + I S + + + A + + + + SGH +LK + Sbjct: 340 KLQKGGLYIHSNAEPLGDFDPAYKPFVEQFAKNNIEF------KALRCSGHADEGELKEI 393 Query: 380 YQWIRPQVLVAIHGEPLHLVAH 401 I+P VLV +H L + Sbjct: 394 IGGIQPAVLVPVHTLHPELEEN 415 >gi|258578481|ref|XP_002543422.1| predicted protein [Uncinocarpus reesii 1704] gi|237903688|gb|EEP78089.1| predicted protein [Uncinocarpus reesii 1704] Length = 875 Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 88/272 (32%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELLFNCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + ++ + + + Sbjct: 72 FDLSTVDVLLVSHFHLDHSAALPYVLSKTNFKGRIFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + +P I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLPLIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIS-------AEVPKGIKIDVLIAESTFGISSSPPRLERE-TALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + V ++ R + ++ I ++ Sbjct: 243 SVTSILNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|189218285|ref|YP_001938927.1| exonuclease of the beta-lactamase fold involved in RNA processing [Methylacidiphilum infernorum V4] gi|189185143|gb|ACD82328.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Methylacidiphilum infernorum V4] Length = 457 Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 66/459 (14%), Positives = 132/459 (28%), Gaps = 72/459 (15%) Query: 16 EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 EIG N +G I++D G+ + +L P+ + + + I+H Sbjct: 11 EIGANSYFLDFG---EDGRIVLDAGLHPKIEG----ELATPNFQSLEDYP--IDCLIISH 61 Query: 76 AHEDHYGALH-DLWSFLHVPVYASPFAIGL------------LEAKRV------------ 110 AH DH GAL L + ++ V+ S L L+ + Sbjct: 62 AHHDHTGALPLYLRKYPNLKVFLSEPTYYLTPPLLHNSVEVMLKQRLALQLPEYPLYTHK 121 Query: 111 --YERVSKKIPCISFQAGDKV-----DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + C + + H I + + I I +T Sbjct: 122 EIDQGTERWQACHINKEWSLNGYPNPKHEPLTFRFYPSGH-ILGAVGVRIFHRGRRIFYT 180 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIM 221 GD + ++ EGI L+ +ST E + I++ + I Sbjct: 181 GDVSFKEQTLMLP-------ADFPTEGIDVLIIESTRGALEMEKGVTRQTEIQRLVESIE 233 Query: 222 KNAKGCVLVTTFSSSVSRIRSIID---------IAEQIGRKIVLLGSSLKRVVSVAIDVG 272 V ++ + + + + I L S + Sbjct: 234 NTFDRGGSVLIPIFALGKTQETLTTLFFEQQEGRLRKCPIYIGGLSRSFSEIYDKLSSRS 293 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE------MRNVKLAEKD 326 + + + D + + ++GE + + + EK+ Sbjct: 294 LRRYPGFKILDTIAPIVINGKKTHRIQPAKGEIYLVTSGMMNENTISNILAQKFLPNEKN 353 Query: 327 TVIFSS---RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV--SGHPYPNDLKRMYQ 381 ++ F P ++ N +V H + H D+ Q Sbjct: 354 SIFFVGYCDPDSPAGQLLATPRGNLVVLNSSSKPQPVLCEVDHFDLTSHALREDILSYIQ 413 Query: 382 WIRPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPVRNG 419 + P+ + +HG+P L K+ L + + G Sbjct: 414 LLEPRTCILVHGDPNALDWFKQRLEEESPQINLVIPSPG 452 >gi|154322621|ref|XP_001560625.1| hypothetical protein BC1G_00653 [Botryotinia fuckeliana B05.10] gi|150847987|gb|EDN23180.1| hypothetical protein BC1G_00653 [Botryotinia fuckeliana B05.10] Length = 828 Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 87/270 (32%), Gaps = 42/270 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL F LGG E+G + + Y K +M+D G+ G D + + Sbjct: 22 DELTFTNLGGGNEVGRSCHIIQY----KGKTVMLDAGM------HAGYDGLAALPFYDDF 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVY---------- 111 + + + I+H H DH +L + + + V+ + + + + Sbjct: 72 DLSTVDLLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIIDSVRVGGASSG 131 Query: 112 ----------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + ++ + + + + H + +I I Sbjct: 132 GGSQPVYTEADHLTTFAQIEAIDYHTTHTISSIRVTPYPAGH-VLGAAMFLIEIAGLKIF 190 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+ +DD L + I L+ +ST + E+ + + + Sbjct: 191 FTGDYSREDDRHLVS-------AEVPKGVKIDVLITESTYGIASHIPRLERE-QALMKSV 242 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 V ++ R + ++ I ++ Sbjct: 243 TSILNRGGRVLMPVFALGRAQELLLILDEY 272 >gi|239612611|gb|EEQ89598.1| endoribonuclease ysh1 [Ajellomyces dermatitidis ER-3] Length = 904 Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S + V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSQIEAIDFNTTHTINSIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNI 217 I+ TGD+ ++ D+ + A +G I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGIKIDVLITESTFGVSSNPPRLERE-AALM 241 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 KSITGVLNRGGRVLMPVFALGRAQELLLILDEY 274 >gi|119389195|pdb|2DKF|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389196|pdb|2DKF|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389197|pdb|2DKF|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389198|pdb|2DKF|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily Length = 431 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 49/266 (18%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITFI 61 +P G E+ + L G + +++DCG K++ G D Sbjct: 2 RIVPFGAAREVTGSAHLLLAG----GRRVLLDCGXFQGKEEARNHAPFGFD--------- 48 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 K + A+ +THAH DH G L L+ PVYA+ + L E P Sbjct: 49 ---PKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLXEIVLEDALKVXDEPF 105 Query: 121 -------------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 106 FGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDLG 164 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNAK 225 + +L D + L ++ + T R E +++ + + + Sbjct: 165 NREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQG 215 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 216 GKVLIPTFA--VERAQEILYVLYTHG 239 >gi|156403103|ref|XP_001639929.1| predicted protein [Nematostella vectensis] gi|156227060|gb|EDO47866.1| predicted protein [Nematostella vectensis] Length = 527 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 63/401 (15%), Positives = 129/401 (32%), Gaps = 56/401 (13%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIM---KERKNLMAIFITHAHEDHYGALHDLWSF-- 90 M+DCG+ +D + FPD +I K ++L + I+H H DH GAL Sbjct: 1 MLDCGMHMGYND----ERRFPDFDYITRSGKLTEHLDCVLISHFHLDHCGALPYFSEMVG 56 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN-------- 142 P+Y + + R + + V +N Sbjct: 57 YDGPIYMTHPTKAICPILLEDYRKITVERKGETNFFTSQMIKDCMKKVVPINLHQSIKVD 116 Query: 143 ----------HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + +R ++V+TGD+ + D LG I Sbjct: 117 DELEIKAYYAGHVLGAVMFHMRVGTESVVYTGDYNMTPDRHLGS-------AWIDKCRPD 169 Query: 193 ALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ +ST A R+ E+ K +++ M+ G VL+ F+ + R + + + E Sbjct: 170 ILITESTYATTIRDSKRCRERDFLKKVHETMEKG-GKVLIPVFA--LGRAQELCILLETY 226 Query: 251 ------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 I ++ ++ + ++ E + Sbjct: 227 WERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIKNTFVQRNMFEFEHIKPFDRSYIDN 286 Query: 305 PRSAL---------AQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQG 353 P + A LS + E + V+ + G + K +++ Sbjct: 287 PGPMVVFATPGMLHAGLSLQIFKKWASNENNMVVIPGYCVAGTVGHKVLAGQKKIELDKK 346 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + + + S H + ++ + P+ ++ +HGE Sbjct: 347 NVIDVKLSVQYMSFSAHADAAGIMQLIRTAEPRNVILVHGE 387 >gi|312794642|ref|YP_004027565.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876583|ref|ZP_07736565.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796658|gb|EFR13005.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|312181782|gb|ADQ41952.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 592 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 141/374 (37%), Gaps = 30/374 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + +++DCG + + + ++ + + A+ I+HAH DHY L Sbjct: 239 HFLRFENEILVLDCGSNPKEFSIVDIEGFLTQKGY---STNMIKAVLISHAHYDHYSCLQ 295 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P+YA+ I L+ SKKI + ++ +VG F I H I Sbjct: 296 YLPH--SIPLYATKETIDLIFIVNREHLESKKINLVKCN--EEFEVGKFRITPFSNGH-I 350 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 ++ I+ +++TGD+ L + + + + + G + L+ + T ++ Sbjct: 351 LGSVGFDIQFGNKRLIYTGDFSL-HNQMTAEGMNLQDILKRGK--VNYLVSEHTYGQKDF 407 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK---IVLLG--SS 260 E K Y + + V + S+ R + +I+I R +V+ G Sbjct: 408 AIKYEDAAKCLAYAVDFLVTLGIKVFIPAFSIGRAQEVIEIIFAFCRTKPMVVVDGLAKD 467 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV 320 + S L S + +IV ++G +A+ + + Sbjct: 468 ISLYYSARSGKNFFHNVILGSSKDIENNVQGADVIVASSGMLQSHSTAV--------KYL 519 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 ++ + F G +I + V + ++ + +S H +L + + Sbjct: 520 QILKDTKFGF---IKTGYIEDQHYIHEMV---KVMMNSDVYYFDIPLSAHSNYFELLQTF 573 Query: 381 QWIRPQVLVAIHGE 394 + + P+ ++ +HG+ Sbjct: 574 RVLEPEKIILVHGQ 587 >gi|313498742|gb|ADR60108.1| Metallo-beta-lactamase family protein [Pseudomonas putida BIRD-1] Length = 455 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 135/443 (30%), Gaps = 82/443 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG G + + + +++DCG+ F + P + L A Sbjct: 6 LGGTGTVTGS----KFLLSRDSTRVLVDCGL-FQGFKQLRLRNWQPLPPALRA----LDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RVSKKIPCI 121 + +THAH DH G L L P+YA+P L E A+ E + + Sbjct: 57 VVLTHAHLDHSGYLPVLVREGYRGPIYATPATCALAEILLLDSARLQEEQAEHANRHGYS 116 Query: 122 SFQAGDKVD-----------VGAFSIE-----------SVRVNHSIPETMALVIRSPVGN 159 + ++ +R I + I + Sbjct: 117 KHAPAQPLYTEQDAKRALALFRPVALHQVTMIAEGMELLLRTAGHILGAATVQISAEGQT 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIY 218 ++ +GD + + L+ +ST R+ + S E+ + K I Sbjct: 177 VLFSGDLGR-PQDPIMRAPELVRTA-------DVLLIESTYGDRQHSAESTEQYLAKVIN 228 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------------------IVLLG 258 + + G LV +F+ + R + ++ + R + Sbjct: 229 ETLLRH-GITLVPSFA--IGRAQLLMYYLYTLKRDRLIPDIPIYLNSPMATDATVLYQQY 285 Query: 259 SSLKRVVSVAIDVGIIKKDQLF-LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 S R+ + + + + RE ++IA L L Sbjct: 286 RSEHRLTAAECAAMCRGTHIIRTVDESRHLDQLREPAVIIAASGMATGGRVLHHL----- 340 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVA--IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +++++FS G A + + + I ++S H ++ Sbjct: 341 KALAPNPRNSILFSGFQAGGTRGADIVAGAHSVRLHGEDVPIRAQVHAMENLSAHADADE 400 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 + + P+ IHGEP Sbjct: 401 IMEWLRGFTRPPRQTYVIHGEPH 423 >gi|156064885|ref|XP_001598364.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154691312|gb|EDN91050.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 820 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 87/270 (32%), Gaps = 42/270 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL F LGG E+G + + Y K +M+D G+ G D + + Sbjct: 22 DELTFTNLGGGNEVGRSCHIIQY----KGKTVMLDAGM------HAGYDGLAALPFYDDF 71 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVY---------- 111 + + + I+H H DH +L + + + V+ + + + + Sbjct: 72 DLSTVDLLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIIDSVRVGGASSN 131 Query: 112 ----------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + ++ + + + + H + +I I Sbjct: 132 GGSHSVYTEADHLTTFAQIEAIDYHTTHTISSIRVTPYPAGH-VLGAAMFLIEIAGLKIF 190 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDI 220 TGD+ +DD L + I L+ +ST + E+ + + + Sbjct: 191 FTGDYSREDDRHLVS-------AEVPKGVKIDVLITESTYGIASHIPRLERE-QALMKSV 242 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 V ++ R + ++ I ++ Sbjct: 243 TSILNRGGRVLMPVFALGRAQELLLILDEY 272 >gi|311695297|gb|ADP98170.1| metallo-beta-lactamase family protein [marine bacterium HP15] Length = 453 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 64/462 (13%), Positives = 132/462 (28%), Gaps = 110/462 (23%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------------SFPKDDLPG 50 +L F LGG G + + Y + +++DCG+ FP D Sbjct: 1 MKLRF--LGGTGTVTGS----RYLLSDEKHRVLVDCGMYQGVKTLRRRNWAKFPVD---- 50 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--- 106 + A+ +THAH DH G L L VY + L + Sbjct: 51 --------------PSTIDAVVLTHAHIDHSGYLPALVKNGFKGKVYCTKATHELCKVLL 96 Query: 107 ---------------AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIES 138 K+ + + A + + V F + Sbjct: 97 PDAGFLQEEDAKYAFRKKFSKHEKPEPLFTEKDAWEALKHFESLHYHEAFEPVKGFQVTF 156 Query: 139 VRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 H I + + + +V +GD +D I+ L+C Sbjct: 157 TPAGH-ILGSSCVHVHHQGADRTVVFSGDVGRQNDIIMRPPEPLQK--------ADVLIC 207 Query: 197 DSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----- 250 +ST R G E + + I A +V + +V R + ++ + +I Sbjct: 208 ESTYGDRAHGETDPEAELAEIITRT---AGRGGIVLLPAFAVGRAQMLLYVIHKIMGDGK 264 Query: 251 --GRKIVLLGSSLKRVVSVAIDVGI----------IKKDQLFLSDESFGLYPREQLIVIA 298 + L + + + ++ + + Sbjct: 265 IPKLPVFLNSPMAIKATEIFCKHHKEHKLNAAQCELMDEKTEFVRTVEESIELDAVRYPC 324 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 ++ ++ + + +++V+F+ PG + N + Sbjct: 325 VIISASGMASGGRVLHHL-KTLLPNPRNSVVFAGFQAPG--TRGDALVNGAESVKIHGEY 381 Query: 359 EDAECPVH----VSGHPYPNDLKRMY--QWIRPQVLVAIHGE 394 + +H +S H N++ ++P+ + HGE Sbjct: 382 WPVKAEIHNLDSLSAHGDYNEILAWLGQSSLKPEKVYVTHGE 423 >gi|221108689|ref|XP_002164154.1| PREDICTED: similar to cleavage and polyadenylation specific factor 3-like [Hydra magnipapillata] Length = 524 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 13/143 (9%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK- 63 ++ +PLG ++G + + G + IM+DCG+ +D + FPD T+I K Sbjct: 3 DIKVVPLGAGQDVGRSCIIVTLGGKN----IMLDCGMHMGYND----ERKFPDFTYIAKT 54 Query: 64 --ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + I+H H DH GAL P+Y + + R + Sbjct: 55 GPYTPHIDCLIISHFHLDHCGALPYFTEMCGYDGPIYMTHPTKAICPILLEDFRKIQVER 114 Query: 120 CISFQAGDKVDVGAFSIESVRVN 142 ++ + + VN Sbjct: 115 KGDSDFFTSQNIKDCMKKVIPVN 137 >gi|260942735|ref|XP_002615666.1| hypothetical protein CLUG_04548 [Clavispora lusitaniae ATCC 42720] gi|238850956|gb|EEQ40420.1| hypothetical protein CLUG_04548 [Clavispora lusitaniae ATCC 42720] Length = 797 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 82/284 (28%), Gaps = 55/284 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++ F LGG E+G + + Y K IM+D GV + P Sbjct: 11 SDDFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDSGVHPGLSGMNS----LPFFD--D 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + + I+H H DH +L + V+ + + Sbjct: 61 YDLSKVDILLISHFHLDHAASLPYVMQQTSFRGRVFMTHATKAIYRWLLSDFVRVTSLSG 120 Query: 110 -----------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 + +S + +++ + H + Sbjct: 121 SGDEGRSMNGSQNSGTTSANLYTDEDLMSSFDKIETIDYHSTMEIEGIRFTAYHAGH-VL 179 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + ++ TGD+ ++D L + + L+ +ST Sbjct: 180 GACMYFVEIGGLKVLFTGDYSREEDRHL-------KVAEVPPTRPDILITESTFGTATHE 232 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK + + +I + ++ R + ++ I E+ Sbjct: 233 PRLEKE-TRMMKNIHSTILKGGRILMPVFALGRAQELLLILEEY 275 >gi|85001073|ref|XP_955255.1| cleavage and polyadenylation specificty factor, subunit [Theileria annulata strain Ankara] gi|65303401|emb|CAI75779.1| cleavage and polyadenylation specificty factor, subunit, putative [Theileria annulata] Length = 1282 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 79/247 (31%), Gaps = 53/247 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + LG E+G + +M DCG+ L GV P + Sbjct: 2 DDRVRITVLGAGCEVGRSCVYVE----RDNSCLMFDCGL---HPALSGV-GALPVFEAVD 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGL---------------- 104 + +TH H DH GA+ L S + + +P + Sbjct: 54 --ISKVEVCLVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLLWTDYARMEQLLT 111 Query: 105 LEAKRVYERVSKKIPC-----------------ISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++ + ++ C + ++ V I R H + Sbjct: 112 VKTIFDDDDGMDELVCGSGLYSFEDVEYALDRIETIDFHQEITVNDIKISCYRAGH-VLG 170 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 ++ I++TGD+ ++ D L I + + L+ +ST +R Sbjct: 171 ACMFLVEIDGVRILYTGDYSVEKDKHLPS-------AEIPSTNVHLLISESTYGIRVHEE 223 Query: 208 ISEKGIK 214 S++ ++ Sbjct: 224 RSQREMR 230 >gi|170093225|ref|XP_001877834.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647693|gb|EDR11937.1| predicted protein [Laccaria bicolor S238N-H82] Length = 772 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 71/428 (16%), Positives = 131/428 (30%), Gaps = 59/428 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L LG E+G + + Y + I+ D GV G+ P I + Sbjct: 6 TLSVTMLGAGQEVGRSCCVLQY----RGRTIVCDTGV---HPAYNGI-ASLPFIDELD-- 55 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEAKRVYE-RVSKKI 118 + AI ITH H DH AL + + VY + + + R+ Sbjct: 56 WSTVDAILITHFHLDHAAALTYITEKTNFRDGKGKVYMTHPTKAVHKFMMQDYVRMGSST 115 Query: 119 PCISFQAGDKVD----------------VGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 F D S H + +I I++ Sbjct: 116 SDALFSPLDMTMSLASIIPVSAHQLITICPGVSFTPYHAGH-VLGACMFLIDIAGLKILY 174 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDI 220 TGD+ ++D L + L+ +ST ++ EG E+ ++ + Sbjct: 175 TGDYSREEDRHLVK-------AELPPVRPDVLIVESTYGVQSLEGREEKEQRFTNLVHSV 227 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGI 273 ++ G VL+ F+ + R + ++ I ++ + SSL R I Sbjct: 228 IRRG-GHVLLPAFA--LGRAQELLLILDEYWKKHPDLHNVPIYYASSLARKCMAVYQTYI 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQG-----EPRSALAQLSRGEMRNVKLAEKDTV 328 + S + P P SR ++ + Sbjct: 285 HTMNNNIRSRFAKRDNPFVFKCKKIAEGPPCVVLASPGFMQVGPSRELFELWAPDARNGL 344 Query: 329 IFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 I + +I G + + +G + + + V S H + + ++ Q Sbjct: 345 IITGYSIEGTLARDIMTEPEEFTSLKGATIPRKISVDYVSFSAHVDYSQNSEFIELVKAQ 404 Query: 387 VLVAIHGE 394 +V +HGE Sbjct: 405 HVVLVHGE 412 >gi|328956830|ref|YP_004374216.1| metallo-beta-lactamase family protein [Carnobacterium sp. 17-4] gi|328673154|gb|AEB29200.1| metallo-beta-lactamase family protein [Carnobacterium sp. 17-4] Length = 441 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 140/415 (33%), Gaps = 54/415 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-----------DLPGVDLVFPDITFI 61 G+ IG N+ +++ ++ D G+S D + V P I ++ Sbjct: 9 GLHTIGGNIMEV----QTAQARVICDFGLSVGGDTEQIDETLSELEFLLVTNQLPSIPYL 64 Query: 62 MKER--KNLMA-----------IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL--LE 106 + K + +FI+H H DH G L L VY S A L + Sbjct: 65 YETESFKKIKLASVNESTLKTTLFISHLHLDHMGGLQYLPE--GTVVYLSEDAYRLYYVL 122 Query: 107 AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 K E K F V VG ++ +H A I + ++H+GD Sbjct: 123 IKVGEEN-PSKADIRLFDFDTAVQVGDITVTPKWSDHDSVGCSAFFIETQELKLIHSGDV 181 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-----SEKGIKKNIYDIM 221 +L + + + + +L L S + E SEK + + +++ Sbjct: 182 RL-NGEHPERIIEWANEAKAWKPDVLLLEGTSFSFDGEKKQATEEPVSEKELLQKWGELL 240 Query: 222 KNAKGCVLV-TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 ++ +++ + ++ RI++I + E L G + + A + ++ + Sbjct: 241 QDDPDSIILYNPYIRNIERIKAIAEETE-------LYGRKMVFESAYAEVLHAFYPEKKW 293 Query: 281 LSDESFGLYPREQL--IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 ES + +E + ++ P + Q S V + S+ G+ Sbjct: 294 RILESTQMDIKEYVEEVLTLQELIQHPSHYVLQNSYKNKETVTYFNNGIYVHSNGEPLGD 353 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 A I + + + SGH DL + + + + + H Sbjct: 354 YDARY-----AELLYFLEIHQFSFVQMGTSGHATKEDLLTIAENVGAKQTIPWHS 403 >gi|254255493|ref|ZP_04948809.1| hypothetical protein BDAG_04838 [Burkholderia dolosa AUO158] gi|124901230|gb|EAY71980.1| hypothetical protein BDAG_04838 [Burkholderia dolosa AUO158] Length = 488 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 133/448 (29%), Gaps = 84/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + ++IDCG+ F +L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLEHGS----RRVLIDCGL-FQGTK----NLRLRNRSPLPFAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 GTLDAVVLTHAHIDHSGYLPVLARDGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + + G S + H I ++V+ Sbjct: 112 RHGYSKHHPAEPLYTVDDAQRALHLLTPVAFDECTALAGGLSCRLLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 171 HWDRKVLAFSGDLGRYRDPIMQQP--------LPPVHADYLVVESTYGDRLHPDTDPENE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG------RKIVLLGSSLKR---- 263 ++D G V++ F+ V R + I+ ++ R V L S + Sbjct: 223 LAALFDKTFARGGVVVMPCFT--VGRAQEILHYIARLKAAGRMARVPVFLDSPMATDVTE 280 Query: 264 -----------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSAL 309 +S A +G + ++VIA + G L Sbjct: 281 IYRRHILEHRLTLSEADALGHAATMTRTVDQSKAIGEHHGPMVVIAGSGMATGGRVLHHL 340 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + + L A+ +E + I V +V E +S Sbjct: 341 TRYAPDARNTIALVGYQAAGTRGAALAAHEPTV-KIHGEYVRVRAQV-----ESITTLSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ R ++ P+ HGEP Sbjct: 395 HADYEEVLRWLGTMQRAPERTFVTHGEP 422 >gi|300697519|ref|YP_003748180.1| exonuclease/RNA metabolizing enzyme, metallo-beta-lactamase family [Ralstonia solanacearum CFBP2957] gi|299074243|emb|CBJ53788.1| exonuclease/RNA metabolizing enzyme, metallo-beta-lactamase family [Ralstonia solanacearum CFBP2957] Length = 452 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 66/437 (15%), Positives = 126/437 (28%), Gaps = 72/437 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + + G +M+DCG+ F + + ++ A Sbjct: 6 LGATDTVTGSKYVLEAGGRQ----VMVDCGL-FQGFKSL----RLRNWDKLPVNPHHIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------------- 109 + +THAH DH G L L PVY + L Sbjct: 57 VLLTHAHIDHSGYLPLLVRNGFRGPVYCTRGTAELCGIMLPDSARLAVEDATYANAQGFS 116 Query: 110 ----------VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVG 158 + G++ V E R H I ++ + + Sbjct: 117 RHHPALPLYDENDAAKALRRLHPIAYGERFPVAEGIEAEFHRAGH-IIGAASVTLYAQGQ 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 +V +GD TD L+ +ST R + + + Sbjct: 176 RVVFSGDLG--------RQTDPVMRAPEPVAEADHLLVESTYGDRLHPPGDPLDLLERVV 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDI----AEQIGRKIVLLG-------SSLKRVVSV 267 + G +L+ F+ V R ++++ Q V + + + Sbjct: 228 RQTIDQGGTLLIPAFA--VGRTQALLYCLYALIRQHRIPHVPIYLDSPMAERATEVFARH 285 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 D+ I D + + +Q + +A+ + A + ++ G L Sbjct: 286 VDDLHIDAADCQAACALAVPVQSPQQSMHLASDRTPKIILAASGMATGGRVLHHLKAYGG 345 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED-------AECPVHVSGHPYPNDLKRMY 380 ++ + G + A L Q + E H+S H ++L Sbjct: 346 GKRNAILMSGFQAAGTRGAALLAGQRQVRVHGHDVAIRATVEQIQHLSAHADADELMAWL 405 Query: 381 QWIR--PQVLVAIHGEP 395 + P+ +HGEP Sbjct: 406 RGFTRAPRQTFIVHGEP 422 >gi|52841255|ref|YP_095054.1| metallo-beta lactamase family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628366|gb|AAU27107.1| metallo-beta lactamase family [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 453 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 79/455 (17%), Positives = 128/455 (28%), Gaps = 81/455 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L GS K I+IDCG+ F +L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLTIGS----KKILIDCGL-FQGYK----ELRLRNWAPLPIDP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ ITHAH DH G L L +Y +P L R++ Sbjct: 52 HDIDAVIITHAHIDHSGYLPLLVKNGFQGKIYTTPGTKALCSILLPDSGHLQEEEARLAN 111 Query: 117 KIPCISFQA-----------------------GDKVDVGAFSIESVRVNHSIPETMALVI 153 K + FS E R H I + I Sbjct: 112 KYGFSKHKPALPLYTEKEAQTALNYFETIDFDTPHQLFHDFSFEYHRAGH-IVGAAMVKI 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 ++ G+IV TGD D + L+ +ST R Sbjct: 171 KTQKGSIVFTGDIG--------RPYDPVMKAPAFIQETDYLVMESTYGDRLHDATDPLPQ 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 + + G V++ F+ V R +S++ ++ R+ + K + Sbjct: 223 MAQVINQTVKRGGSVIIPAFA--VGRAQSLLYFIYELKRQGAIP----KNIPVFLDSPMA 276 Query: 274 IKKDQLFLSDESFGLYPREQLIVIA--------------TGSQGEPR-----SALAQLSR 314 I L + + EQ + P+ S +AQ R Sbjct: 277 IDATHLLCTYKEDHHLTAEQCQGLCRIATYVNTPEESKEIDRHHMPQIIIAASGMAQGGR 336 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGH 370 A I N + + V V S H Sbjct: 337 ILHHLKVFAPDPKSTLLFTGFQAGGTRGARIVNGERQVKIHGSLIPIRAQVVVMSSTSAH 396 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKE 403 +L + P+ + HGEP + KE Sbjct: 397 ADYQELLGWLKHFARPPKKVFITHGEPHSAQSLKE 431 >gi|328773999|gb|EGF84036.1| hypothetical protein BATDEDRAFT_9083 [Batrachochytrium dendrobatidis JAM81] Length = 669 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 30/193 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L PLG E+G + L + K IM+DCG+ L P I Sbjct: 53 EEDILKITPLGAGNEVGRSCILLEF----KGKTIMLDCGLHPAHSGL----AALPFFDNI 104 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERV----- 114 +++ + ITH H DH L V+ + + + Sbjct: 105 D--PESVDLVLITHFHVDHAAGLPYFMEKTAFKGRVFMTHPTRAIYKWLVSDYIKISSLS 162 Query: 115 ------------SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 + +VD+G H + ++ +++ Sbjct: 163 PDDQLYSDKDLANSYGRIEVIDYHQEVDLGGIKFTPYYAGH-VLGAAMFLLEIAGVRLLY 221 Query: 163 TGDWKLDDDAILG 175 TGD+ ++D L Sbjct: 222 TGDYSREEDRHLM 234 >gi|74691679|sp|Q74ZC0|YSH1_ASHGO RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 Length = 771 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 84/282 (29%), Gaps = 52/282 (18%) Query: 1 MKNEEL-----VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 M E+L F LGG E+G + + Y K +M+D GV G+ Sbjct: 1 MTEEKLDTNSFRFFGLGGSNEVGRSCHILQY----KGKTVMLDAGV---HPAHQGI-ASL 52 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR---- 109 P + + + I+H H DH +L + V V+ + + Sbjct: 53 PFYD--EFDLSQVEVLLISHFHLDHAASLPYIMQRTNFQVRVFMTHPTKAIYRWLLSDFV 110 Query: 110 --------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + +DV + H + Sbjct: 111 KVTNIGNDNAGGVSDENLYTDEDLAESFDRIETVDYHSTIDVNGIKFTAYHAGH-VLGAA 169 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + I+ TGD+ + D L I L+ +ST + Sbjct: 170 MFQVEIAGLRILFTGDYSRELDRHLNS-------AEIPTLPSDILIVESTFGTATHEPRT 222 Query: 210 EKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K K + + G VL+ F+ + R + I+ I ++ Sbjct: 223 SKEKKLTQLIHTTVSKGGRVLLPVFA--LGRAQEIMLILDEY 262 >gi|268317679|ref|YP_003291398.1| beta-lactamase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335213|gb|ACY49010.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 464 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 82/486 (16%), Positives = 148/486 (30%), Gaps = 89/486 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 ++F+ LG IG N Y +++D GV P ++ P P I + Sbjct: 1 MIFVALGDTEAIGANC----YFVKLDGTGLVLDVGVD-PNEEGPE---SLPRFELIHRNP 52 Query: 66 K-NLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLL-----------EAKRVYE 112 + +THAH DH GAL L HV V+ + L + Sbjct: 53 DWYIDHAIVTHAHHDHIGALPVLLREFPHVLVHMTRVTRQLADLLLPASARLQRRRLQEG 112 Query: 113 R------------VSKKIPCISFQAGDKVDV------GAFSIESVRVNHSIPETMALVIR 154 R ++ + G V H + L+ Sbjct: 113 RSSYGPLFDEKQLEGYSYLYLTHEPGQDFSVTGLRGRSPVRARFYHAGHVLGSAGVLLTH 172 Query: 155 SPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST-----NAMREGT 206 + +T D L AI+ E + L+ +ST A R Sbjct: 173 EEDGRRQRVFYTSDTNLRPQAIIPGG-------DYPEEPVDVLILESTAGADPEAERTTR 225 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLG 258 + E+ + + ++ G VLV F+ + R + ++ + ++ + G Sbjct: 226 RLEEERFGEAVRRVLDRG-GSVLVPAFA--LGRAQEVLAVIDRLKREKVLPADVPVYTAG 282 Query: 259 --SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE-----------QLIVIATGSQGE- 304 ++ + V + PR + V+++G E Sbjct: 283 TMRAIADLYDRTRFVTPRLDPSFEVFRVEQRRLPRRLEAVRQALAEPAIYVLSSGMMFER 342 Query: 305 -PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV----EQGVRVIAE 359 + +AQL + R+ V F+ P + EQ Sbjct: 343 SLSNRMAQLLVEDERHAIF----LVGFAREDSPAGRLLAAAEAGAEEIVLDEQRGPQSLR 398 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG-EPLHLVAHKELALQEGIACVPPVRN 418 SGH + DL R+ + ++P+ ++ +HG E + V R+ Sbjct: 399 CEVARFRFSGHSHRRDLLRLVERLQPRHVILVHGDEDAREWMADNIQFFYPEVNVWMPRS 458 Query: 419 GKMLRL 424 G+ L L Sbjct: 459 GEPLEL 464 >gi|189208340|ref|XP_001940503.1| endoribonuclease YSH1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976596|gb|EDU43222.1| endoribonuclease YSH1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 871 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 94/276 (34%), Gaps = 51/276 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD---LPGVDLVFPDIT 59 ++EL+FL LGG E+G + + Y K +M+D G+ + +P D D Sbjct: 21 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAHEGLSAMPFYD----DFD 72 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVY------ 111 + + I+H H DH +L + + + V+ + + + Sbjct: 73 -----LSTVDVLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIQDSVRVGN 127 Query: 112 ---------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + ++ S V I H + ++ Sbjct: 128 MSSNSETKIQMYTEADHLNTYPMIESIDFYTTHTVAGVRITPYPAGH-VLGAAMFLMEIA 186 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IK 214 I+ TGD+ +DD L + + L+ +ST + T E+ + Sbjct: 187 GLKILFTGDYSREDDRHLVSASVPA------GVKVDVLITESTFGISMHTPRVEREAQLM 240 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K I D++ +L ++ R + ++ I ++ Sbjct: 241 KAITDVLNRGGRALL---PVFALGRAQELLLILDEY 273 >gi|148360321|ref|YP_001251528.1| metallo-beta lactamase family transporter protein [Legionella pneumophila str. Corby] gi|296106617|ref|YP_003618317.1| metallo-beta-lactamase family protein [Legionella pneumophila 2300/99 Alcoy] gi|148282094|gb|ABQ56182.1| metallo-beta lactamase family [Legionella pneumophila str. Corby] gi|295648518|gb|ADG24365.1| metallo-beta-lactamase family protein [Legionella pneumophila 2300/99 Alcoy] Length = 453 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 84/452 (18%), Positives = 131/452 (28%), Gaps = 75/452 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L GS K I+IDCG+ F +L + + + Sbjct: 1 MKLTFLGATQTVTGSKYLLTIGS----KKILIDCGL-FQGYK----ELRLRNWAPLPIDP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EAKR-- 109 ++ A+ ITHAH DH G L L +YA+P L EA+ Sbjct: 52 HDIDAVIITHAHIDHTGYLPLLVKNGFQGKIYATPGTKALCSILLPDSGYLQEEEARLAN 111 Query: 110 ----------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 R + + FS E R H I + I Sbjct: 112 KYGFSKHQPALPLYTEKEARAALQYFETIDFDTPHQLFHEFSFEYHRAGH-IVGAAMVKI 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 ++ G+IV TGD D E L+ +ST R Sbjct: 171 KTKKGSIVFTGDIG--------RPHDPVMKSPSAIEEADFLVMESTYGDRLHDATDPLPQ 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL-----KRVVSVA 268 + + G V++ F+ V R +S++ ++ R+ + + + A Sbjct: 223 MAQVINQTVKRGGSVIIPAFA--VGRAQSLLYFIYELKRQ-GKIPKDIPVFLDSPMAIDA 279 Query: 269 IDVGIIKKDQLFLSDESFG---------LYPREQLIVIATGSQGEPR--SALAQLSRGEM 317 + K+ L+ E P E + S +AQ R Sbjct: 280 THLLCTYKEDHHLTAEQCRGLCHVATYVNTPEESKEIDRHHMPQIIIAASGMAQGGRILH 339 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYP 373 A I N + + + V V S H Sbjct: 340 HLKAFAPNPRNTLLFTGFQAGGTRGARIVNGERQVKIHGSLIPIQAQVVVMSSTSAHADY 399 Query: 374 NDLKRMYQWI--RPQVLVAIHGEPLHLVAHKE 403 +L Q PQ + HGEP KE Sbjct: 400 LELLEWLQHFARPPQKVFITHGEPHSAQTLKE 431 >gi|307353378|ref|YP_003894429.1| KH-domain/beta-lactamase-domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156611|gb|ADN35991.1| KH-domain/beta-lactamase-domain protein [Methanoplanus petrolearius DSM 11571] Length = 629 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 92/274 (33%), Gaps = 47/274 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITF 60 K++ + LG E+G L + I+IDCG + GV + P+I Sbjct: 175 KDKWVRVTTLGCCREVGRAAFLL----STPESKILIDCGEKPGSTE--GVPYLYVPEIYP 228 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVY 111 + L A+ +THAH DH + L+ + PVY++P L LE Sbjct: 229 L----NTLDAVVLTHAHLDHCALVPLLYRYGFEGPVYSTPATRDLAVMLQLDYLEVVSNE 284 Query: 112 ERVSKKIPCISFQAGDKVDV----------GAFSIESVRVNHSIPETMALVIRSPV--GN 159 + + K V + H I + N Sbjct: 285 ANQAPYTSKEVQEYLKKSIVLNYGSVTDIAPDIKLTYHNAGH-ILGSAIAHFHVGDGLYN 343 Query: 160 IVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I +GD+ + G T L + +ST S+K ++ +Y Sbjct: 344 IAFSGDFNYGKTRLFGPATSQFPRLE--------TIFVESTYGGANDIQPSKKDAEEKLY 395 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G V++ F+ V R + ++ E+ Sbjct: 396 EAVNTTIKRGGKVIIPAFA--VGRSQEVMLTLEE 427 >gi|88602138|ref|YP_502316.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88187600|gb|ABD40597.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 629 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 87/274 (31%), Gaps = 47/274 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K++ + LG E+G L + ++IDCG P L P+I + Sbjct: 175 KDQWIRVTTLGCCREVGRAAFLL----STPESRVLIDCGEK-PDSFEATPYLYVPEIHPL 229 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------YE 112 L A+ +THAH DH + L+ + PVY++P L A E Sbjct: 230 ----SQLDAVVLTHAHLDHCAYIPLLYKYGYEGPVYSTPPTRDLA-AMLQLDYLDVVNKE 284 Query: 113 RVSKKIPCISFQAGDKVDV-----------GAFSIESVRVNHSIPETMALVIRSPV--GN 159 + K + + H I + N Sbjct: 285 GKPIPYSSNEVKEYIKHSIVLNYGCVTDIAPDIKLTFHNAGH-ILGSGIAHFHVGDGLYN 343 Query: 160 IVHTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + TGD + + L AL +ST + + ++ +Y Sbjct: 344 VAFTGDLHYGKSRLFNAAVNHYPRLE--------ALFMESTYGGAQDMQPNRADAEERLY 395 Query: 219 DIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G +++ F+ V R + ++ E+ Sbjct: 396 GVFREVLERGGKIIIPAFA--VGRSQEVMLAIEE 427 >gi|312219521|emb|CBX99464.1| similar to cleavage and polyadenylation specifity factor [Leptosphaeria maculans] Length = 861 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 92/273 (33%), Gaps = 45/273 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G+ + L P Sbjct: 21 SDELLFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAYEGL----SAMPFYD--E 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + + + V+ + + + Sbjct: 71 FDLSTVDVLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIQDSVRVGNMSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + P I V I H + ++ Sbjct: 131 NSETKIQMYTEQDHLNTYPMIESIDFYTTHTVSGVRITPYPAGH-VLGAAMFLMEIAGLK 189 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNI 217 I+ TGD+ +DD L + + L+ +ST + T E+ + K I Sbjct: 190 ILFTGDYSREDDRHLVSASVPA------GVKVDVLITESTFGISMHTPRVEREAQLMKAI 243 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 DI+ +L ++ R + ++ I ++ Sbjct: 244 TDILNRGGRALL---PVFALGRAQELLLILDEY 273 >gi|150399442|ref|YP_001323209.1| beta-lactamase domain-containing protein [Methanococcus vannielii SB] gi|150012145|gb|ABR54597.1| beta-lactamase domain protein [Methanococcus vannielii SB] Length = 421 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 63/423 (14%), Positives = 127/423 (30%), Gaps = 74/423 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG +IG + + + I++DCG+ + LP + D + A+ Sbjct: 8 GGCHQIGKSCVEV----NTKKSKILLDCGMDPSDNSLPDIK----DSEY--------DAV 51 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------------KRVYERVSKKIP 119 ++HAH DH GA+ VY +P L+ K + + + Sbjct: 52 LVSHAHLDHCGAIPYF--NFK-KVYCNPPTADLMYNVWKDTVNLSKIYKEEDIKKTMDVI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +K ++ H I + ++ + +++TGD + L Sbjct: 109 KTVKYREEKQVTSDIKMKMHDAGH-ILGSSSIYLDVDGKKLLYTGDINEIETRTLCS--- 164 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 + I ++ +ST + K ++K + D + G V++ F+ Sbjct: 165 ----ADTDIDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIENGGKVIIPVFA-- 218 Query: 237 VSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDV-----GIIKKD 277 V R + II + G +G + + + I Sbjct: 219 VGRSQEIIVVINNYMKSGALKEVPIYVNGSLTHTIGMYMGYSEWLNPKIKNTIENRINPF 278 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + +I+ +G L+ L + + + + Sbjct: 279 GNLIKNSDEVFNKEPCIIISTSGMVQGGPILQYLSLLKNPKNKLILTGYQAEGTIGRSLE 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGE 394 G + + V S H N L R + I P+ + +HGE Sbjct: 339 EG--------VKEITPFKRAIPVNGTVIKVEFSAHADYNSLIRYLKKIPEPKKAIVMHGE 390 Query: 395 PLH 397 Sbjct: 391 RYQ 393 >gi|294945156|ref|XP_002784572.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239897691|gb|EER16368.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 213 Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 34/190 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI-M 62 + L PLG E+G + + + + +M DCG+ + P + Sbjct: 23 DTLEITPLGAGQEVGRSCVILKF----RGRTVMFDCGIHPAHTGM----TALPFFDHLST 74 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVSKKIPC 120 + N+ + +TH H DH GA+ L Y + + KI Sbjct: 75 ADLTNVDLLLVTHFHLDHSGAVPYLIGRTDFKGRTYMTHPTRPICRLLWQDYARVSKITA 134 Query: 121 ISFQAGDKVDV----------------------GAFSIESVRVNHSIPETMALVIRSPVG 158 Q + D+ G S + R H + V+ Sbjct: 135 AEDQVYGRTDIDKCMQRIDTCTFHQTVTISTPAGPISFTAYRAGH-VLGAAMFVVEIDGV 193 Query: 159 NIVHTGDWKL 168 +++TGD+ Sbjct: 194 RLLYTGDFSR 203 >gi|289614131|emb|CBI61500.1| unnamed protein product [Sordaria macrospora] Length = 857 Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 44/271 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 22 DELMFLNLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----AALPFFDDFD- 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV----------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 73 -LSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQDSVRVGNTSSN 131 Query: 111 --------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 E K P I + + I H + +I I Sbjct: 132 PTSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGH-VLGAAMFLIEIAGLKIF 190 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LALMCDSTNAMREGTCISEKGIKKNIYD 219 TGD+ ++ D+ + A +G+ L+ +ST + E+ + + Sbjct: 191 FTGDYSREE--------DRHLISAEVPKGVKIDVLITESTYGIASHIPRVERE-QALMKS 241 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 242 ITGILNRGGRVLMPVFALGRAQELLLILDEY 272 >gi|313224131|emb|CBY43589.1| unnamed protein product [Oikopleura dioica] Length = 213 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 42/224 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ +PLG ++G + L G+ + +M DCG+ D FPD +I Sbjct: 3 DIRIVPLGAGQDVGRSCILVSIGNKN----VMFDCGMHMGYQDA----RRFPDFNYITGG 54 Query: 65 RK-----NLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYER--VS 115 + ++ A+ I+H H DH GAL + P+Y + + R V+ Sbjct: 55 DQTTLTPHIDAVIISHFHLDHCGALPYMSEQVGYEGPIYMTMPTKVICPILLEDFRKVVT 114 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVIRSPV 157 K+ + + V + I Sbjct: 115 KRSAGAETNFFTSEMIKNCMRKVEIVGLHQVINVDDELSIKAYYAGHVLGAAMFKITVGD 174 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 ++++TGD+ + D LG + + L+ +ST A Sbjct: 175 ESVLYTGDFNMTPDRHLG-----AAWADRCKPTV--LISESTYA 211 >gi|115361267|ref|YP_778404.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115286595|gb|ABI92070.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 468 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 69/449 (15%), Positives = 129/449 (28%), Gaps = 85/449 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLVEHGS----RRVLVDCGL-FQGTK----NLRLRNWQPLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAVVLTHAHLDHSGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV------------------------GAFSIESVRVNHSIPETMALV 152 + + + G S + H I ++V Sbjct: 112 RHDYSKHRPAQPLYTLDDAQRALRLLKPVAYDECTALGGGGLSFRLLPAGH-ILGAASVV 170 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + + +GD D I+ ++ +ST R + Sbjct: 171 MHWDHKVLAFSGDLGRYHDPIMQPP--------RPPAHADYVVVESTYGDRLHPASDPEN 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK------IVLLGSSLKRV-- 264 ++D G V++ F+ V R + I+ ++ V L S + Sbjct: 223 ELAAMFDKTFARGGVVVMPCFT--VGRTQEILHYIARLKASGRMAHVPVFLDSPMATNAT 280 Query: 265 -------------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSA 308 VS A +G + +++IA + G Sbjct: 281 EIYRHHILEHRLTVSEANTLGHAATMVRSVDQSKAIAEHHGPMVIIAGSGMATGGRVLHH 340 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L++ + + L A+ +E + I V +V E +S Sbjct: 341 LSRYAPDARNTIALVGYQATGTRGAALAAHEPTL-KIHGEYVRLRAQV-----ESITALS 394 Query: 369 GHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ ++ P HGEP Sbjct: 395 AHADYEEILTWLGTMQCAPVRTFITHGEP 423 >gi|149173952|ref|ZP_01852581.1| exonuclease of the beta-lactamase fold involved in RNA processing [Planctomyces maris DSM 8797] gi|148847482|gb|EDL61816.1| exonuclease of the beta-lactamase fold involved in RNA processing [Planctomyces maris DSM 8797] Length = 464 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 78/491 (15%), Positives = 164/491 (33%), Gaps = 99/491 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG GE+ + L + + I++DCG+ F +++ R Sbjct: 1 MKITFLGAAGEVTGSQHLIE----TDSRRILLDCGL-FQGHRQE---------SYLKNSR 46 Query: 66 -----KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------- 111 ++L A+F++H H DH G L L++ PV+ + + E Sbjct: 47 FAYPPESLDAVFLSHGHMDHCGNLPRLFNKGFRGPVFCTSATADIAEIMLKDSARIQEED 106 Query: 112 -----ERVSKKIPCISF-----------------QAGDKVDVG-AFSIESVRVNHSIPET 148 +++ K P I + + ++G + + H I + Sbjct: 107 ARYLARKLTDKHPPIEPLYSEDDVTAVAKQFERLEYQEWHELGDDLKVRFLDAGH-ILGS 165 Query: 149 MALVI----RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + + ++V TGD D +L D + + EG L+ +ST R Sbjct: 166 AIIELKIKDQREWRHLVFTGDLGRRDLPLLR---DPELI-----EGCEVLISESTYGNRV 217 Query: 205 GTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIA------EQIGRKIV 255 S +K+ ++ I+ A +G V++ FS + R + II +++ + Sbjct: 218 HEKAS--DVKEELFQILDEAYRLEGRVIIPAFS--LGRTQQIIYYLNDLYNEKRLPHIPI 273 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ---- 311 + S L + + D S P ++ S+ E + + Sbjct: 274 FVDSPLSTRLVSVFRAHLQDMDDNVREVISTDRDPFGFSLLDYVSSREESIALNKRKGAF 333 Query: 312 -------LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI---GHIKNRLVEQGVRVIAEDA 361 + L + + ++ + G + A ++N+ + + + Sbjct: 334 VVIAGSGMCENGRVRHHLKNGISNVENTVVLMGYQAAHTLGRRLQNKDPKVKIFDRYYEV 393 Query: 362 ECPVH----VSGHPYPNDLKRMYQWIRPQ----VLVAIHGEPLHLVAHKELALQEGIACV 413 + V +SGH D K Y+ + + +HGEP A L + Sbjct: 394 KAKVVQLSGLSGHADVEDFKWWYEESAKRGNIGQVFLVHGEPESATALAALIRDQCDEDP 453 Query: 414 PPVRNGKMLRL 424 + + + Sbjct: 454 IIPQYHESFEV 464 >gi|85712054|ref|ZP_01043107.1| Predicted exonuclease of the beta-lactamase fold [Idiomarina baltica OS145] gi|85694044|gb|EAQ31989.1| Predicted exonuclease of the beta-lactamase fold [Idiomarina baltica OS145] Length = 460 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 116/317 (36%), Gaps = 62/317 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERK 66 LGG ++ + L+ + + +MIDCG ++ D P VD+ Sbjct: 15 LGGTWQVTGSCHLWHLNAQQT---VMIDCGAFQGITQEDDLTPYVDV------------D 59 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----AKRVYERVSKKI--- 118 +L A+FITHAH DH G L L + P+Y + + L++ + + Sbjct: 60 SLAAVFITHAHLDHVGRLPQLLALGYRGPIYCTAATLALMQLVLGDSLQLAGIRDESALT 119 Query: 119 --------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALV-IRSPVGNIVHTGDWKL 168 + + G VDV S+ H + + I+S +V +GD Sbjct: 120 AFNTLLARHVVLCEYGQTVDVLPSLSVTFEEAGHILGSSYLCFDIKSLHKRVVFSGDLGC 179 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 + ++ D T L+ +ST R S++ + + I+K A Sbjct: 180 RNSPLINDPTPLKR--------ADLLVLESTYGDRSHGDRSQRT--QQLESIIKRAVVDG 229 Query: 226 GCVLVTTFSSSVSRIRSIID----------IAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS + R + ++ ++ +++ S + V+ Sbjct: 230 GAILIPAFS--IGRTQELLYEFEQIWHQHACSKDTDFPEIVIDSPMANKVTDIYQHHEAL 287 Query: 276 KDQLFLSDESFGLYPRE 292 D S ++ G +P + Sbjct: 288 WDATSRSRQAHGRHPLD 304 >gi|262392548|ref|YP_003284402.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. Ex25] gi|262336142|gb|ACY49937.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. Ex25] Length = 441 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 136/435 (31%), Gaps = 68/435 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT-FIMKERKNLMA 70 GG + + + + I+IDCG+ KD L G + D + I + A Sbjct: 7 GGKDTVTGSC----HELRLEQGSILIDCGLFQGKDALVGRN----DRSLAIEFPLTKVKA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------EAKRVYERV 114 + +THAH DH G L L + +Y + L+ + +R + Sbjct: 59 LVLTHAHIDHIGRLPWLLAAGFKGKIYCTQATAELVPLMLEDGLKLQLGLGKHQRQHILN 118 Query: 115 SKKIPCISFQAGDKVDVGAF-SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 K + Q + + I H + S +V +GD D + Sbjct: 119 LIKQRLVPCQYNTWLPLKGLAYIRFQPAGHILGSAYLEFKLSNNDVVVFSGDLGPSDTPL 178 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTT 232 L D E L +ST ++ + K + +I + G +++ Sbjct: 179 LPDP--------KPPEKADYLFIESTYGDKQHESVKSKSTRLLSIIEHALEDGGVIVIPA 230 Query: 233 FSSSVSRIRSIIDIAEQ-------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 FS V R + ++ EQ G ++L S L R V+ + Sbjct: 231 FS--VGRTQELLFDIEQLLHQESLHGALPIILDSPLARKVTKTYRRFKKLWGKEAKRRLE 288 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN------- 338 +P I + E + +L+ + +A N Sbjct: 289 QHRHPLGFEQCITIETHAEHMRLVNRLASTSEPAIVVAASGMCEGGRVVNYLNALLPDSR 348 Query: 339 ----------EVAIGH-IKNRLVEQGVRVIAEDAECPVH----VSGHPYPNDLKRMYQWI 383 E +G I+ E + + +H S H +DL R + I Sbjct: 349 NDVLFAGYQAEGTLGREIQEGASEVDIEGKKIKVKAQIHTMSGYSAHADQSDLIRFVEGI 408 Query: 384 R--PQVLVAIHGEPL 396 P+ + IHGE Sbjct: 409 NPPPKEVHLIHGENK 423 >gi|290559801|gb|EFD93125.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 629 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 143/445 (32%), Gaps = 76/445 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LG +G + L S +++D GV P P + + Sbjct: 175 WVRISALGAFRHVGRSAVLVQTPISS----VLLDAGVDVSNSREP-----VPRVDAPEFD 225 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------------EAKR 109 L A+ ITH+H DH G L L+ + PVY++ ++ K Sbjct: 226 ISKLNAVVITHSHLDHCGFLPVLYKYGYKGPVYSTAPTRDVMTLLHLDYINLASKTNGKL 285 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH---SIPETMALV--IRSPVGNIVHTG 164 +++ K +V + + H I + + I + N+++TG Sbjct: 286 LFDVDDIKNMLKHSITIPFHEVTDITPDIRITLHNAGHILGSAMIHLNIGNGFYNVLYTG 345 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+K ++ L E + L+ +ST T +K +DI+ Sbjct: 346 DFKYENSKTLNR-------AETQFERVETLIMESTYGGDADTQPVRSETEKFFFDIISKT 398 Query: 225 ---KGCVLVTTFSSSVSRIRSI---IDIAEQIGR---KIVLLGSSLKRVVSVAIDVGIIK 275 G VLV V R + I I+ ++ G V++ L V ++ Sbjct: 399 VANNGKVLVPVLG--VGRAQEIMLLIEEWQRYGLLPEVPVIVDGMLWDVTAIYTVYPEFM 456 Query: 276 KDQLFLSDESFGLYPR------------EQLIVIATG-----------SQGEPRSALAQL 312 + + P E+ V++ G + G S A L Sbjct: 457 NSETRNRIITHHNNPFLSPIFKHTVSEEERQQVLSGGPAILLATSGMLNGGPSVSYFANL 516 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN-RLVEQGVRVIAEDAECPVHVSGHP 371 E + L V R I + N +L V + E SGH Sbjct: 517 CEDEKNAIVLVSYQGVGTLGRTIQNGGREVDIELNGKLKHFTVNALVYSIEG---FSGHS 573 Query: 372 YPNDLKRMYQWIRPQ--VLVAIHGE 394 L+R IRP+ ++ HGE Sbjct: 574 DRKQLERFVSDIRPKPRKVIIGHGE 598 >gi|149634612|ref|XP_001513453.1| PREDICTED: similar to DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Ornithorhynchus anatinus] Length = 994 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 114/330 (34%), Gaps = 40/330 (12%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A F+TH H DHYG L P+Y + L+++K ++ Sbjct: 676 DDCTAYFLTHFHSDHYGG---LSKKFTYPIYCNKITGNLVKSKLK----VQEQYIHILPM 728 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLC 184 V + + NH P + L+ P I+HTGD++ D Sbjct: 729 DTVCIVNGIKVVLLDANH-CPGAVMLLFYLPNGNVILHTGDFRADPSM--------KRYP 779 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG---CVLVTTFSSSVSRIR 241 + + I L D+T E + S++ + + + + LV + S+ + + Sbjct: 780 KLIGQKIHMLYLDTTYCSPEYSFPSQQEVIQFAANTAFESINLNPHTLVICGTYSIGKEK 839 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 I IAE +G K+ S+ + + +++ ++ + L ++ Sbjct: 840 VFIAIAEVLGSKV-----SMSQEKYKTLRCLELEEVNSLIT-TDWSSTKVHLLPMMQITF 893 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 +G +S L++ + + +E + + + Sbjct: 894 KG-LQSHLSKFGGKYNQVLAFKPTGWTY--------SEKSSS-----ISDIKPETRGNIT 939 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++K QW++PQ ++ Sbjct: 940 IYGIPYSEHSSYLEMKHFVQWLKPQKIIPT 969 >gi|260060893|ref|YP_003193973.1| hypothetical protein RB2501_04830 [Robiginitalea biformata HTCC2501] gi|88785025|gb|EAR16194.1| hypothetical protein RB2501_04830 [Robiginitalea biformata HTCC2501] Length = 458 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 64/463 (13%), Positives = 140/463 (30%), Gaps = 87/463 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + LG G + + Y + + I+IDCG+ F +L + + Sbjct: 1 MTERTINIHFLGAAGTVTGS----KYLLDTGDRKILIDCGL-FQGLK----ELRLKNWEY 51 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYER 113 + A+ +TH H DH G L L P+Y + + + + AK + Sbjct: 52 PPVNVTEIDAVLLTHGHLDHTGYLPRLVKQGFKGPIYGTYPTLDIAKIILNDSAKIQEQE 111 Query: 114 VSK------------------KIPCISFQAGDKVDVGAFSIESVRV------NHSIPETM 149 + K + + + + V N I Sbjct: 112 AERANKGGYSKHSPAEPLYDLKDVEKTIPYFKGIPLNQWLPILKNVKARFQYNGHILGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + + V +GD +D +L L +ST R + Sbjct: 172 YIELDVQDKRFVFSGDIGRTNDLLLYPPAKPKR--------ADVLFMESTYGGRFHPEET 223 Query: 210 EK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI--AEQIGRKIVLLGSSLKRVV 265 E I+K + + + G + + +FS +++ +I ++ V + ++ Sbjct: 224 EALPEIEKLVNETVSRG-GSLFIPSFSVERAQLMMLIFWRLLKETKIPKVPM------IM 276 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 + +++ +++ + + +L + + + Sbjct: 277 DSPMGANVLELFHRTRDWHRLEDDECDKMC--SHFTVVSSYRETMELRSDDKPKIVI-AG 333 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLV-----------------EQGVRVIAEDAECPVHV- 367 ++ R + E + N L+ E+ ++V + + V Sbjct: 334 SGMLTGGRMLNYLETQAQNPDNTLLFVGYQAEGTRGRKLLEGEKEIKVYGKTVSFKMQVA 393 Query: 368 -----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 S H +L I+ P+ + +HGE A K+ Sbjct: 394 EIEGLSAHADHAELLDWLSDIKIQPEKIFIVHGEREGAEALKQ 436 >gi|171320781|ref|ZP_02909789.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] gi|171093973|gb|EDT39086.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] Length = 467 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 68/448 (15%), Positives = 129/448 (28%), Gaps = 84/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLIEHGS----RRVLVDCGL-FQGTK----NLRLRNWQPLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L AI +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAIVLTHAHLDHSGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + + G S + H I ++V+ Sbjct: 112 RHDYSKHRPAQPLYTLDDAQRALGLLKPVAFDECTALGGGLSFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ ++ +ST R + Sbjct: 171 HWDHKVLAFSGDLGRYHDPIMQPP--------RPPAHADYVVVESTYGDRLHPASDPEKE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-------------KIVLLGSS 260 ++D G V++ F+ V R + I+ ++ + + Sbjct: 223 LAAMFDKTFARGGVVVMPCFT--VGRAQEILHYIARLKASGRMARVAVFLDSPMATDATE 280 Query: 261 LKRV--------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSAL 309 + R VS A +G + +++IA + G L Sbjct: 281 IYRHHILEHRLTVSEANTLGHAATMVRSIDQSKAIAEHHGPMVIIAGSGMATGGRVLHHL 340 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 ++ + + L A+ +E + I V +V E +S Sbjct: 341 SRYAPDVRNTIALVGYQAAGTRGAALAAHEPTL-KIHGEYVRVRAQV-----ESITALSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ ++ P HGEP Sbjct: 395 HADYEEILTWLGTMQCAPVRTFITHGEP 422 >gi|320593246|gb|EFX05655.1| cleavage and polyadenylation specificity factor subunit [Grosmannia clavigera kw1407] Length = 857 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 40/270 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G D L P Sbjct: 21 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGL----ASLPFFDDFD 72 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + + V+ + + + Sbjct: 73 --LSTVDVLLISHFHVDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSS 130 Query: 111 ---------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + I V + I H + +I I Sbjct: 131 NPTSQPVYTEQDHLSTFRQIEAIDYHTTHTVSSIRITPYPAGH-VLGAAMFLIEIAGLKI 189 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 + TGD+ + D L T + L+ +ST + E+ + + I Sbjct: 190 MFTGDYSRELDRHLVSATVPK------GVKVDVLITESTYGIASHVPRLERE-QALMKSI 242 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 V ++ R + ++ I ++ Sbjct: 243 TGILNRGGRVLMPVFALGRAQELLLILDEY 272 >gi|71027889|ref|XP_763588.1| cleavage and polyadenylation specificity factor protein [Theileria parva strain Muguga] gi|68350541|gb|EAN31305.1| cleavage and polyadenylation specificity factor protein, putative [Theileria parva] Length = 708 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 54/248 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ + LG E+G + +M DCG+ L GV P + Sbjct: 2 DDRVRITVLGAGCEVGRSCVYVE----RENSCLMFDCGL---HPALSGV-GALPVFEAVD 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIG--------------LLE 106 + +TH H DH GA+ L S + + +P LL Sbjct: 54 --ISKVQVCLVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLLWTDYARMEQLLT 111 Query: 107 AKRVYERVSKKIPCISF--------------------QAGDKVDVGAFSIESVRVNHSIP 146 K ++ + + + ++ V I R H + Sbjct: 112 VKTIFNDDDESMDELVCGSGLYSFEDVEHALDRIETIDFHQEITVNDMKISCYRAGH-VL 170 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 +I I++TGD+ ++ D L I + L+ +ST +R Sbjct: 171 GACMFLIEIGGVRILYTGDYSMEKDRHLPS-------AEIPLTNVHLLISESTYGIRVHE 223 Query: 207 CISEKGIK 214 S++ ++ Sbjct: 224 ERSQREMR 231 >gi|295425765|ref|ZP_06818450.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] gi|295064573|gb|EFG55496.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] Length = 433 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 142/439 (32%), Gaps = 85/439 (19%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG--------VSFPKDD---LPGVDLV--FPDI- 58 G+ IG M Y + ++ D G +S +D L L+ PD Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVYRPELGLSMDDEDYQTLIKYQLIGEVPDFY 69 Query: 59 ------TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY- 111 I +R A +I+H H DH AL+ L +P+YA P LL A Sbjct: 70 DEKITGKAIDTKRWKHSAAYISHLHLDHSKALNLLSPT--IPLYAGPITAHLLPALNEKG 127 Query: 112 --------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 P I+ + + VG ++E +H L++++P I T Sbjct: 128 DFLLPAAGHEKGYTRPIIAAEYKKPIKVGEITMEIWPSDHDAYGATGLIVKTPDKKISFT 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-----------SEKG 212 GD +L + ++G + ++T + +E Sbjct: 188 GDIRLHGYHPDWVHEFLAA-----SKGADLFITEATGSSWPERKNEKQSEEFTGINNEDE 242 Query: 213 IKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + + + + N K + T+ ++V R+ II S ++VV A Sbjct: 243 LTQEVVRLQKANPKRQITFNTYPTNVERLLRIISD-------------SPRKVVLHAKRA 289 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK--------LA 323 ++ K + P E EP + L + + L Sbjct: 290 HLLHKSLGKEFPYYY--LPEEPKF---ADLNPEPEVSYQDLLNDDHEFLWQAVAYFDQLM 344 Query: 324 EKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 E I S + + + A + V + SGH +L+ + Sbjct: 345 EGGLYIHSNAEPLGDFDPAYKPFVENFAKHNVEY------KALRCSGHADEGELQEIISE 398 Query: 383 IRPQVLVAIHGEPLHLVAH 401 ++P +LV +H LV + Sbjct: 399 VQPAILVPVHTLHPELVEN 417 >gi|254229442|ref|ZP_04922857.1| RNA-metabolising metallo-beta-lactamase family [Vibrio sp. Ex25] gi|151938013|gb|EDN56856.1| RNA-metabolising metallo-beta-lactamase family [Vibrio sp. Ex25] Length = 466 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 139/445 (31%), Gaps = 68/445 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT-F 60 K + L GG + + + + I+IDCG+ KD L G + D + Sbjct: 22 KEIAMKVLHHGGKDTVTGSC----HELRLEQGSILIDCGLFQGKDALVGRN----DRSLA 73 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------- 105 I + A+ +THAH DH G L L + +Y + L+ Sbjct: 74 IEFPLTKVKALVLTHAHIDHIGRLPWLLAAGFKGKIYCTQATAELVPLMLEDGLKLQLGL 133 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGAF-SIESVRVNHSIPETMALVIRSPVGNIVHT 163 + +R + K + Q + + I H + S +V + Sbjct: 134 GKHQRQHILNLIKQRLVPCQYNTWLPLKGLAYIRFQPAGHILGSAYLEFKLSNNDVVVFS 193 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMK 222 GD D +L D E L +ST ++ + K + +I + Sbjct: 194 GDLGPSDTPLLPDP--------KPPEKADYLFIESTYGDKQHESVKSKSTRLLSIIEHAL 245 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +++ FS V R + ++ EQ G ++L S L R V+ Sbjct: 246 EDGGVIVIPAFS--VGRTQELLFDIEQLLHQESLHGALPIILDSPLARKVTKTYRRFKKL 303 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + +P I + E + +L+ + +A Sbjct: 304 WGKEAKRRLEQHRHPLGFEQCITIETHAEHMRLVNRLASTSEPAIVVAASGMCEGGRVVN 363 Query: 336 PGN-----------------EVAIGH-IKNRLVEQGVRVIAEDAECPVH----VSGHPYP 373 N E +G I+ E + + +H S H Sbjct: 364 YLNALLPDSRNDVLFAGYQAEGTLGREIQEGASEVDIEGKKIKVKAQIHTMSGYSAHADQ 423 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 +DL R + I P+ + IHGE Sbjct: 424 SDLIRFVEGINPPPKEVHLIHGENK 448 >gi|330923041|ref|XP_003300074.1| hypothetical protein PTT_11224 [Pyrenophora teres f. teres 0-1] gi|311325959|gb|EFQ91831.1| hypothetical protein PTT_11224 [Pyrenophora teres f. teres 0-1] Length = 705 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 94/276 (34%), Gaps = 51/276 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD---LPGVDLVFPDIT 59 ++EL+FL LGG E+G + + Y K +M+D G+ + +P D D Sbjct: 21 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAHEGLSAMPFYD----DFD 72 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVY------ 111 + + I+H H DH +L + + + V+ + + + Sbjct: 73 -----LSTVDVLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIQDSVRVGN 127 Query: 112 ---------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + ++ S V I H + ++ Sbjct: 128 MSSNSETKIQMYTEADHLNTYPMIESIDFYTTHTVSGVRITPYPAGH-VLGAAMFLMEIA 186 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IK 214 I+ TGD+ +DD L + + L+ +ST + T E+ + Sbjct: 187 GLKILFTGDYSREDDRHLVSASVPA------GVKVDVLITESTFGISMHTPRVEREAQLM 240 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K I D++ +L ++ R + ++ I ++ Sbjct: 241 KAITDVLNRGGRALL---PVFALGRAQELLLILDEY 273 >gi|170722201|ref|YP_001749889.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169760204|gb|ACA73520.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 455 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 74/451 (16%), Positives = 128/451 (28%), Gaps = 86/451 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F GG G + + L + ++IDCG+ F + P T + Sbjct: 1 MQLTFF--GGTGTVTGSKFLLTH----DSTRVLIDCGL-FQGYKQLRLRNWEPLPTALR- 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK 116 + A+ +THAH DH G L L PVYA+P L E A+ E+ Sbjct: 53 ---TVDAVVLTHAHLDHSGYLPVLVREGFSGPVYATPATCALAEILLLDSARLQEEQAEH 109 Query: 117 KIPC------------------------ISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + + +R I + Sbjct: 110 ANRHGYSKHSPARPLYTEQDAKRALQLFRPVALHHRTRIAPGVELLLRTAGHILGAATVQ 169 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT-CISEK 211 + +V +GD D L+ +ST R E+ Sbjct: 170 LTLDGQTVVFSGDLG--------RPNDPVMRAPELIGAADVLLVESTYGDRSHPAQPPER 221 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK------------------ 253 + I + G LV +F+ V R + ++ + R Sbjct: 222 YLADVINQTLLRH-GITLVPSFA--VGRAQLLMYYLYMLKRDGLIPDIPVYLNSPMATDA 278 Query: 254 --IVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS----QGEPRS 307 + S R+ ++ + DES L + VI S G Sbjct: 279 TTLYQQFRSEHRLTALECAQMCKGTQIIRTLDESRHLDQLREPAVIIAASGMATGGRVLH 338 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L L+ ++ + I ++ + V +V ++ Sbjct: 339 HLKALAPNAHNSILFSGFQAGGTRGADIIAGARSV-RLHGEDVPIRAQVF-----AMDNL 392 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +++ + P+ IHGEP Sbjct: 393 SAHADADEIMEWLRGFTRPPRQTYVIHGEPH 423 >gi|260655485|ref|ZP_05860973.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] gi|260629933|gb|EEX48127.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] Length = 629 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 69/464 (14%), Positives = 134/464 (28%), Gaps = 102/464 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 L F LG E+ + L G +++D G+ +++ + + Sbjct: 7 KMRLKF--LGATQEVTGSCYLIEVG----GHRVLVDFGMHQGENEE-------ANYDPLS 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------------AK 108 + ++ A+ +THAH DH G + L VY + L+E A Sbjct: 54 FDPTSIDALLLTHAHIDHSGRIPLLARSGFKGKVYCTLPTAELVELLWADSANLMKEDAA 113 Query: 109 RVYERVSKKIPCISFQAGDKVDVGA-------------------FSIESVRVNHSIPETM 149 + +K D+ D+G S+ H I ++ Sbjct: 114 WRSRKNLRKGLPAVEPLYDETDIGNALKLLYPISYDDRYDVVPGLSVRFRDAGHIIGSSI 173 Query: 150 ALVIRSPVGN---IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 V + +V +GD + + + I ++ +ST R+ Sbjct: 174 LEVFLTEGDRNVKVVFSGDLGPAKTVM------ERAPAEI--NEADYVLIESTYGDRDHK 225 Query: 207 CISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR------------ 252 E K ++ + D++ + + T RI + + G Sbjct: 226 TNEETRKEFQELMADLLAHKSKIYIPTFVVDRAQRIMYELALLRDQGIGTDLPVYFDSPL 285 Query: 253 -----KIVLLGSSL----KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS-- 301 ++ + ++ + + + + E + V+ GS Sbjct: 286 GVKATEVYQNHLDMMSQEIQMYRRSGKNPFLDSVEFVSTVEDSQKINTKSYGVVMAGSGM 345 Query: 302 --QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G L +V V + +R G I + + Sbjct: 346 VNGGRIVHHLKNGIWNPNNHVVF-----VGYQARGTAG-----RRIVDGAKTIRLAGEEV 395 Query: 360 DAECPVHV----SGHPYPNDLKRMYQWIR---PQVLVAIHGEPL 396 + +H S H DL + R PQ V +HGEP Sbjct: 396 AVKAQIHTIGGFSAHADRTDLILWAEHFRLSMPQFFV-VHGEPQ 438 >gi|269797398|ref|YP_003311298.1| beta-lactamase [Veillonella parvula DSM 2008] gi|269094027|gb|ACZ24018.1| beta-lactamase domain protein [Veillonella parvula DSM 2008] Length = 391 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 68/401 (16%), Positives = 136/401 (33%), Gaps = 57/401 (14%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP---DITFIMKERKNLM 69 G +IG + ++ I++D G ++L + P DI + K N Sbjct: 8 GTHQIGGSA----IEISTASTRIILDFG-----NELSLDEKYIPIKLDIDGVTKGIPNCD 58 Query: 70 AIFITHAHEDH----YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP---CIS 122 I I+H H DH AL +P+Y + + ++ + + Sbjct: 59 GILISHYHMDHLRQLTSALP------EIPLYMGKLSKEVAMIATEHQDKDLYLRLLGANT 112 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 F+ G+ +G I + ++HS ++ VI + +++TGD+++ + Sbjct: 113 FRGGEAFTIGNIHIRPLVIDHSAVDSYMFVIEAEGKRVLYTGDFRMHGLRSHI----VEK 168 Query: 183 LCAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 L + L+ + T R ISE + ++IY +++ K V V S+++ RI Sbjct: 169 LVKTYIGEVDVLITEGTLVSRGVNDGISEAAVLEDIYSYIQDGK-YVFVICSSTNIDRII 227 Query: 242 SIIDIAEQIGRKIVLLGS-----SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 I I ++ V + L L+ S+ Y + V Sbjct: 228 GIWQNMPSDKVLICDAYQKRILDTVINNVYYESSLYRRHDSPLVLNKGSYPKYYVDHGFV 287 Query: 297 -IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + G++ + +I+S E Sbjct: 288 SLVRGTEYFI----------SHIKEFPKDDVRIIYSMWTGYIEENLALKTL--------- 328 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + H SGH +DL + + + P ++ +H + Sbjct: 329 -LETYPTYICHASGHVSKDDLTKFIELVNPDAIIPVHTDNP 368 >gi|242778797|ref|XP_002479311.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218722930|gb|EED22348.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 861 Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + V + + + Sbjct: 72 FDLSTVDILLLSHFHVDHSSALPYVLSKTNFKGRVLTTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + + H + ++ N Sbjct: 132 SSDQRTTLYTEHDHLSTLPLIETIDFYTTHTINSIRVTPYPAGH-VLGAAMFLVSIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPRGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I E+ Sbjct: 243 SITGILNRGGRVLMPVFALGRAQELLLILEEY 274 >gi|212533753|ref|XP_002147033.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Penicillium marneffei ATCC 18224] gi|210072397|gb|EEA26486.1| cleavage and polyadenylation specifity factor, 73 kDa subunit, putative [Penicillium marneffei ATCC 18224] Length = 866 Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 43/272 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL F LGG E+G + + Y K +M+D G+ K+ P Sbjct: 22 SDELAFYCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGF----AALPFFD--E 71 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + ++H H DH AL + S + V + + + Sbjct: 72 FDLSTVDILLLSHFHVDHSSALPYVLSKTNFKGRVLTTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +P I + + + H + ++ N Sbjct: 132 SSDQRTSLYTEHDHLSTLPLIETIDFYTTHTINSIRVTPYPAGH-VLGAAMFLVSIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ TGD+ ++D L + I L+ +ST + E+ + Sbjct: 191 ILFTGDYSREEDRHLIP-------AEVPRGIKIDVLITESTFGISSNPPRLERE-AALMK 242 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I E+ Sbjct: 243 SITGILNRGGRVLMPVFALGRAQELLLILEEY 274 >gi|315038982|ref|YP_004032550.1| hypothetical protein LA2_09240 [Lactobacillus amylovorus GRL 1112] gi|312277115|gb|ADQ59755.1| hypothetical protein LA2_09240 [Lactobacillus amylovorus GRL 1112] Length = 431 Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 137/444 (30%), Gaps = 77/444 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD--LPGVDLV 54 ++ G+ IG M Y ++ D G + P + + + Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELKLPDESYQTLIKNQL 59 Query: 55 F---PDITFIMKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 PD K + A +I+H H DH L+ L +P+YA P L Sbjct: 60 IGDVPDFYDPKITGKPIDTERWEHSAAYISHLHLDHSKVLNLLAPE--IPLYAGPITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A + P I+ + + VG ++E +H L++++ Sbjct: 118 LPALNENGDFLLPAAGHEKNYTRPIIAAEYKKPIKVGDITLEIYPSDHDAYGATGLLVKT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 P I +TGD + + G D +G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDLVRAFMQAAKGSDMLIIEGTGVSWPEEKHDENS--- 229 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSII-DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + K V +T + R+++ D + L+ V V + Sbjct: 230 ---EEFTGPKNEVELT---EEIVRLQNANPDRQITFNTYPTNVERLLRIVSDSPRKVVLH 283 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA--------QLSRGEMRNV------ 320 K + D YP L + + S L +L + + Sbjct: 284 AKRAHLIKDSLNEDYPYYYL------PEDKKYSDLNPELEVSYDELLADNHKYLWQAVSD 337 Query: 321 --KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 KL I S + + + + + + IA + SGH +LK Sbjct: 338 YDKLQMGGLYIHSNAEPLGDFDPTYKPFVEQFAKNKIEFIA------LRCSGHADEKELK 391 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAH 401 + I+P +LV +H L + Sbjct: 392 EIIGGIQPAILVPVHTLHPELEEN 415 >gi|332530295|ref|ZP_08406241.1| beta-lactamase domain protein [Hylemonella gracilis ATCC 19624] gi|332040281|gb|EGI76661.1| beta-lactamase domain protein [Hylemonella gracilis ATCC 19624] Length = 452 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 132/449 (29%), Gaps = 84/449 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L + +++DCG+ F +L + D F + Sbjct: 1 MKLTFLGAAGTVTGSRYLLEH----EGHRLLVDCGL-FQGYKNLR-ELNWEDFPF---DP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 L A+ +THAH DH GAL L P++A+P I L ++ Sbjct: 52 ATLDAVVLTHAHLDHSGALPLLLRRGFRGPMHATPATIELCHLLLPDSGHLQEEDAAYAN 111 Query: 120 -------------------CISFQAGDKVDVG-------AFSIESVRVNHSIPETMALVI 153 S + +D G + H I Sbjct: 112 RHGSSKHHPALALYTEEDARHSLRYLRPLDFGVSEEVLPGLHVTLAPAGH-ILGAAHATF 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I+ +GD +DD I+ T E + ++ +ST R + + + Sbjct: 171 SDGRTKILFSGDVGREDDLIMEPPT--------PPEAVDCMVVESTYGDRVHPTVDNQAL 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-------RKIVLLGSSLKRVVS 266 I + G V++ F+ V R ++++ + ++ I L + Sbjct: 223 LGEIIQRTASRGGSVVIPAFA--VGRAQALLVLIARLKAAHAIPDLPIFLDSPMAIDMTG 280 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPR--------------EQLIVIATGSQGEPRSALAQL 312 + + + + S + I+I+ L + Sbjct: 281 IYLRHHKLHRLSPEESQRMCRVAKMVRTTDESRALNEVRYPSIIISASGMATGGRVLHHI 340 Query: 313 SR--GEMRNVKLAEKDTV-IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 R + RN + I E +I I + V V S Sbjct: 341 KRLAPDHRNTIVLAGYQAGGTRGARIAAGEKSI-RIFGQDVPLNAEVTQLPGM-----SA 394 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H L R PQ + HGEP Sbjct: 395 HADAPQLLRWMGAAPQPPQQVFLTHGEPE 423 >gi|170700306|ref|ZP_02891319.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] gi|170134793|gb|EDT03108.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] Length = 467 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 129/448 (28%), Gaps = 84/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLIEHGS----RRVLVDCGL-FQGTK----NLRLRNWQPLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAVVLTHAHLDHSGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + + G S + H I ++V+ Sbjct: 112 RHDYSKHRPAQPLYTLDDAQRALRLLKPVAFDECTALGGGLSFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ ++ +ST R + Sbjct: 171 HWDHKVLAFSGDLGRYHDPIMQPP--------RPPAHADYVVVESTYGDRLHPASDPENE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK------IVLLGSSLKRV--- 264 ++D G V++ F+ V R + I+ ++ V L S + Sbjct: 223 LAAMFDKTFARGGVVVMPCFT--VGRTQEILHYIARLKASGRMAHVPVFLDSPMATNATE 280 Query: 265 ------------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSAL 309 VS A +G + +++IA + G L Sbjct: 281 IYRHHILEHRLTVSEANTLGHAATMVRSVDQSKAIAEHHGPMVIIAGSGMATGGRVLHHL 340 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 ++ + + L + A+ E + I V +V E +S Sbjct: 341 SRYAPDARNTIALVGYQAIGTRGAALAAREPTL-KIHGEYVRLRAQV-----ESITALSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ ++ P HGEP Sbjct: 395 HADYEEILTWLGTMQCAPVRTFITHGEP 422 >gi|50287519|ref|XP_446189.1| hypothetical protein [Candida glabrata CBS 138] gi|74637743|sp|Q6FUA5|YSH1_CANGA RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|49525496|emb|CAG59113.1| unnamed protein product [Candida glabrata] Length = 771 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 60/463 (12%), Positives = 134/463 (28%), Gaps = 68/463 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ + F LGG E+G + + + K IM+D G+ + P Sbjct: 6 RSNQFRFFSLGGGNEVGRSCHIIQF----KGKTIMLDAGIHPAYQGM----ASLPFYDDF 57 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV--------- 110 + + I+H H DH +L + + V+ + + Sbjct: 58 D--LSIVDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLRDFVRVTSIG 115 Query: 111 --------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + + + +DV + H + I Sbjct: 116 SQSSNAEDDNLYSNEDLIESFDKIETIDYHSMIDVNGIKFTAFHAGH-VLGAAMFQIEIA 174 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 ++ TGD+ + D L + L+ +ST + KK Sbjct: 175 GLRVLFTGDYSREIDRHLNS-------AEVPPLPSDILIVESTFGTATHEPRLHRE-KKL 226 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 I V ++ R + ++ I ++ + S + + A ++ Sbjct: 227 TQLIHSTVNKGGRVLMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLAR--- 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + +++ + + SQ P ++ + + +V+ +S P Sbjct: 284 -KCLSVFQTYVNMMNDNIRKKFRDSQTNPF-IFKNIAYIKNLDEFQDFGPSVMLAS---P 338 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY--------QWIRPQVL 388 G ++N L + D + V ++G+ + + P+V Sbjct: 339 GM------LQNGLSRDLLERWCPDEKNLVLITGYSVEGTMAKYLLLEPDTIPSVSNPEVT 392 Query: 389 VA--IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 + E L AH + N ++ P+P+ Sbjct: 393 IPRRCRVEELSFAAHVDFQENLEFIEQINASNIILVHGEPNPM 435 >gi|121595530|ref|YP_987426.1| beta-lactamase domain-containing protein [Acidovorax sp. JS42] gi|120607610|gb|ABM43350.1| beta-lactamase domain protein [Acidovorax sp. JS42] Length = 454 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 69/470 (14%), Positives = 138/470 (29%), Gaps = 92/470 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG G + + L +G + +++DCG+ F + + Sbjct: 3 VSITFLGGAGTVTGSKYLVRHGGQA----LLVDCGL-FQGYKPL----RLRNWNPLPVAP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 +++ A+ +THAH DH G L L PV+ + L Sbjct: 54 QDIDAVLLTHAHLDHSGYLPLLAKDGFGGPVFCTAGTRDLCAILLPDSGHLQEEDAAFLN 113 Query: 106 EAKRVYERVSKKIP------------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 K + + + + + H I ++++ Sbjct: 114 RHKLSKHEPALPLYTRLDAQHCLSLLQVQPTHQTFEPIRGWRATFQNAGH-ILGAASVLL 172 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-KG 212 I+ +GD D +L D ++ +ST R + Sbjct: 173 EVGGRRILFSGDLGR-PDDLLMHAPD-------APPAADTVLIESTYGDRSHPPGTVLDE 224 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 + + + G +V F+ V R ++++ Q+ + + S L+ + + V Sbjct: 225 LGPALARLAARG-GVAVVPVFA--VGRAQTVMYAIAQLKAR-GEVPSGLRVYLDSPMAVS 280 Query: 273 IIKKDQLFLSDESFGLYPREQL-----------------------IVIATGSQGEPRSAL 309 + Q LS+ + ++++ L Sbjct: 281 ATELFQNHLSETRINRSELHAMARGTTLVHSVDESKALARLHGPRVILSASGMATGGRVL 340 Query: 310 AQLS--RGEMRNVKLAEKDTV-IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 L+ G+ RN+ + I E I I R V V+ Sbjct: 341 HHLALHAGDHRNMIILTGHQAGGTRGARIAAGEKTI-RIHGRDVAIRAEVVQ-----LAT 394 Query: 367 VSGHPYPNDLKRMYQWIR--PQVLVAIHGE---PLHLVAHKELALQEGIA 411 S H + L + + P+ + +HGE L + AL + Sbjct: 395 ASAHADGDQLVAWLRSMPSTPRQVYVVHGEMAAADMLRQRIDHALGCPVE 444 >gi|147677269|ref|YP_001211484.1| exonuclease [Pelotomaculum thermopropionicum SI] gi|146273366|dbj|BAF59115.1| predicted exonuclease [Pelotomaculum thermopropionicum SI] Length = 519 Score = 94.0 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 71/417 (17%), Positives = 130/417 (31%), Gaps = 90/417 (21%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYAS----------PFAIG-------------- 103 + + ++HAH DH G L +PVYAS G Sbjct: 95 VQGVLLSHAHFDHCGHFTYLHQ--DIPVYASLTGAAVCKALQDTAGGEICYITPRELKDG 152 Query: 104 LLEA----------------KRVYERVSKKIPCISFQAGDKVDVGAFS------------ 135 L+ A + ++ Sbjct: 153 LIRATGYRQVPYEQKIYHAFNCESVPPGMASFWRQCDSARGLNCKPLKACGNETSIADLP 212 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVTDKDSLCAIGNEGILA 193 + V+HSIP A +++ G +V+TGD +L A+ + + Sbjct: 213 VRFWPVDHSIPGAGAYALKTSAGWVVYTGDLRLHGKQGALTRQFIN-----EAASLKPAV 267 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 L+C+ T+ + ++E + N ++ +K KG V+ ++ R+ S ++IA R Sbjct: 268 LVCEGTHPEVK-RPVTENEVAANSFEAVKKEKGLVVADFGPRNIERLLSFLEIAGGTDRL 326 Query: 254 IVLLGSSLK--------------------RVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 +VL + R+ + +K + L P E+ Sbjct: 327 LVLTSKDVYLLEALRAAGETGVPDPCADGRIALYVRPRAVRQKWEDSLLARFGERAP-ER 385 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAE-KDTVIFSSRAIPGNEV--AIGHIKNRL- 349 L+ L + + T I+SS E+ ++N + Sbjct: 386 LVDAVRVRAAPGGYILCFSYYDFHAFLDIEPQGGTYIYSSSEAFSEEMLLDHERVRNWIG 445 Query: 350 ---VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 + + + H SGH + ++ M + IRP VLV +H E E Sbjct: 446 LFGFKLYGSLGRDRESSGFHASGHIHGPGIEEMVETIRPSVLVPVHTENREFFRRFE 502 >gi|134291711|ref|YP_001115480.1| beta-lactamase domain-containing protein [Burkholderia vietnamiensis G4] gi|134134900|gb|ABO59225.1| beta-lactamase domain protein [Burkholderia vietnamiensis G4] Length = 481 Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 131/448 (29%), Gaps = 84/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + I++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLVEHGS----RRILVDCGL-FQGTK----NLRLRNWRTLPFAA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAVVLTHAHIDHTGYLPVLAREGFRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G S + H I ++V+ Sbjct: 112 RHGYSKHHPAQPLYTLDDAQRALHLLKPVAFDECTSLGGGVSFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD +D I+ L+ +ST R + Sbjct: 171 HWDHKVLAFSGDLGRYNDPIMQPP--------RAPAHADYLVVESTYGDRLHPASDPEIE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG------RKIVLLGSSLKR---- 263 ++D G V++ F+ V R + I+ ++ R V L S + Sbjct: 223 LAAMFDKTFGRGGVVVMPCFT--VGRAQEILHYIARLKASGRMARVPVFLDSPMATDVTE 280 Query: 264 -----------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSAL 309 VS A +G + +++IA + G L Sbjct: 281 IYRHHILEHRLTVSEANALGHAATMIRSVDQSKAISDHHGPMVIIAGSGMATGGRVLHHL 340 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 A+ + + L A+ +E + I V ++ E +S Sbjct: 341 ARYAPDPRNTIALVGYQAAGTRGAALAAHEPTV-KIHGEYVRVRAQI-----ESITTLSA 394 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H D+ + ++ P HGEP Sbjct: 395 HGDYEDVLKWLGTMQGAPVRTFVTHGEP 422 >gi|302309512|ref|NP_986945.2| AGR279Cp [Ashbya gossypii ATCC 10895] gi|299788393|gb|AAS54769.2| AGR279Cp [Ashbya gossypii ATCC 10895] Length = 771 Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 83/282 (29%), Gaps = 52/282 (18%) Query: 1 MKNEEL-----VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF 55 M E+L F LGG E+G + + Y K +M+D GV G+ Sbjct: 1 MTEEKLDTNSFRFFGLGGSNEVGRSCHILQY----KGKTVMLDAGV---HPAHQGI-ASL 52 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR---- 109 P + + + I+H H DH +L + V+ + + Sbjct: 53 PFYD--EFDLSQVEVLLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLSDFV 110 Query: 110 --------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + +DV + H + Sbjct: 111 KVTNIGNDNAGGVSDENLYTDEDLAESFDRIETVDYHSTIDVNGIKFTAYHAGH-VLGAA 169 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + I+ TGD+ + D L I L+ +ST + Sbjct: 170 MFQVEIAGLRILFTGDYSRELDRHLNS-------AEIPTLPSDILIVESTFGTATHEPRT 222 Query: 210 EKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K K + + G VL+ F+ + R + I+ I ++ Sbjct: 223 SKEKKLTQLIHTTVSKGGRVLLPVFA--LGRAQEIMLILDEY 262 >gi|241951638|ref|XP_002418541.1| cleavage and polyadenylation factor specificity complex subunit, putative; endonuclease, putative [Candida dubliniensis CD36] gi|223641880|emb|CAX43843.1| cleavage and polyadenylation factor specificity complex subunit, putative [Candida dubliniensis CD36] Length = 787 Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 48/227 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E F LGG E+G + + Y K IM+D G+ FP Sbjct: 10 EENFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGMHPALSGH----ASFPYFD--E 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + V+ + + Sbjct: 60 YDISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGN 119 Query: 111 -----------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + + K I +++ + H + Sbjct: 120 SRSGDGSGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGH-VLGACMYF 178 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 + ++ TGD+ +++ L + L+C+ST Sbjct: 179 VEIGGLKVLFTGDYSREENRHLHA-------AEVPPLKPDILICEST 218 >gi|206900110|ref|YP_002250251.1| cleavage and polyadenylation specificity factor [Dictyoglomus thermophilum H-6-12] gi|206739213|gb|ACI18271.1| cleavage and polyadenylation specificity factor [Dictyoglomus thermophilum H-6-12] Length = 515 Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 79/461 (17%), Positives = 150/461 (32%), Gaps = 105/461 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----SFPKDDLPGVDLVFPDITFI 61 + G GE+ + L + ++DCG+ S +++ P F+ Sbjct: 1 MKITFYGAAGEVTGSCYLLE-----NNFKYLVDCGIFQGKSERENESP----------FL 45 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---------KRVY 111 ++ + A+ +THAH DH G + L +YA+ I L E K Sbjct: 46 FDPKE-IKAVILTHAHLDHSGRIPKLVKEGFKGKIYATYPTIELCEILWLDTVKLMKEEV 104 Query: 112 ERVSKKI----------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 ER+++K + VD+ I H I Sbjct: 105 ERINRKNLRSGKPLVEPLYTEKEVEMAMKLFEPVPYDEVVDLSDIKIRFRDSAH-ILGAS 163 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 +L + S IV +GD ++ + G + EG ++ +ST R + Sbjct: 164 SLELWSDGTKIVFSGDIGPQNNVMEGQPS--------IIEGADYVIIESTYGDRLHKSLE 215 Query: 210 E--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI--------------------- 246 E + + D +K ++G +L+ +F V R + ++ Sbjct: 216 ETRSEFESVVLDAIK-SQGKILIPSFV--VDRAQRVMYELMLLTYKYPFLSKVPIFFDSP 272 Query: 247 -----AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG- 300 E + LL +++ I+ +K + ++ + +I G Sbjct: 273 MGKKVTEVYEKHSNLLSGEIQKYFLEGINPFELKNLRYLVTPDESKSINELDTGIIIAGS 332 Query: 301 ---SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 + G L E +V R I E + HI + ++ Sbjct: 333 GMCTGGRILHHLKHNLWKENTHVIFVGYQAEGTLGRRIVDGEKTV-HIMGEEITVRAKIH 391 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 + S H +DL + ++ + P + V +HGEP Sbjct: 392 TING-----FSAHADQSDLVKWTEYFKNDP-IFVIVHGEPK 426 >gi|309789609|ref|ZP_07684190.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] gi|308228345|gb|EFO81992.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] Length = 852 Score = 93.6 bits (231), Expect = 9e-17, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 147/444 (33%), Gaps = 75/444 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG +G + G + +++D GV + G D PD+ + Sbjct: 1 MQIQFLGGASAVGATCQVVHTG----ERRVLVDAGVR-----MDGADR-LPDLAALA--G 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKR------------VYE 112 +L AI ITHAH DH GAL + P+YASP I L+E Sbjct: 49 VSLDAIIITHAHADHIGALPLVADRFPATPIYASPATIRLMEVMLGDAVRVMARRAAEEL 108 Query: 113 RVSKKIPCISFQAGDKVD-----------VGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + + + ++ + + + R H I +++ + G +V Sbjct: 109 ELPLYDAALVAETLRRLRPLQAGAQSLPELPGVIVSAQRAGH-IAGAVSVGFEASDGRLV 167 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYD 219 +GD T + ++ +ST R + E+ + + + Sbjct: 168 ISGDVSATP-----QCTILGA-ALPAPRRPDLMVLESTYGARLHPNRTVEERKLVEAVGA 221 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK----------------IVLLGSSLKR 263 ++ G L+ F+ + R + +I I R + +++ Sbjct: 222 VIARG-GHCLIPAFA--LGRAQEVILILRAAQRDGLIPAFPIAVDGLVRSVCAAYTAIPD 278 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--K 321 ++ A+ I ++ F S + Q + G S+ L+ G + Sbjct: 279 ALTPALARHIRNGNKPFFSRNVQPIDNPNQREQVLAGPPAAIISSSGMLTGGPSVWYAER 338 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKN---------RLVEQGVRVIAEDAECPVHVSGHPY 372 LAE+ E + + R+ + +S H Sbjct: 339 LAERPEAAIFFSGYLDEEAPGRRLLDLADAAPDQRRMTFGDRTIPLRCEVGRYSLSAHAD 398 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPL 396 ++L M + ++P+ + +HG+P Sbjct: 399 GDELAAMVRALQPRTVALVHGDPE 422 >gi|302380226|ref|ZP_07268698.1| putative ribonuclease [Finegoldia magna ACS-171-V-Col3] gi|303235047|ref|ZP_07321671.1| RNA-metabolizing metallo-beta-lactamase [Finegoldia magna BVS033A4] gi|302312009|gb|EFK94018.1| putative ribonuclease [Finegoldia magna ACS-171-V-Col3] gi|302493902|gb|EFL53684.1| RNA-metabolizing metallo-beta-lactamase [Finegoldia magna BVS033A4] Length = 539 Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 73/511 (14%), Positives = 147/511 (28%), Gaps = 96/511 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + + + + M+DCG+ +L + D + Sbjct: 1 MKITFLGAAQEVTGSCYIVE----TEKHKFMVDCGLFQGSKELEQKNHDEIDFS------ 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE------------ 112 ++ + +THAH DH G + L+ P+Y + L E + Sbjct: 51 -DVEFMLLTHAHIDHTGRIPLLYKNGFRKPIYCTKATKDLAEIMLMDSAKIQESDVEWEN 109 Query: 113 -------RVSKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 + + A + + + H + + +L Sbjct: 110 RKRQRSGKPLLSPLYTTIDAMSCISLFKGRFYDEVVKINEDIRVIFRDAGH-MLGSSSLE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I I+ +GD ++ IL + G L+ +ST R Sbjct: 169 IFITENKNTTKIIFSGDIGTSNNPILNNPYVLS--------GCDYLVMESTYGNRIHEPY 220 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 E + I + G V++ +F+ V R + II + ++ V Sbjct: 221 KESVHELINIIEKVSAKG-GTVIIPSFA--VGRTQEIIYELNSY--YDYQIKDHYEKKVP 275 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 V +D + + + + + + + + + E + + E + + + Sbjct: 276 VYVDSPMALEATKAFMENTDLFNQKAKDYISSGDNVFEFENLHYVKNIDESKMLNSVKFP 335 Query: 327 TVIFSSRAIPGNEVAIGHI-KNRLVEQGVRVI-------------------------AED 360 VI SS + H+ N E+ V Sbjct: 336 RVIISSSGMATAGRVRHHLKHNLWDEKNAVVFVGYQAQGSLGRILLDGVDEVKLFGETIK 395 Query: 361 AECPVH----VSGHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + SGH N+L I+P+ + HGE A +L +++ Sbjct: 396 VNAKIFNLGGFSGHADQNNLMEFVDNMKIKPKKIFITHGENDGAEALSKLLIEKYNVEAI 455 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGF 445 P I E+ D + Sbjct: 456 IPEIYSTEEFDPGNYNIEQEISTNRENNDLY 486 >gi|215261121|pdb|2ZDW|A Chain A, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261122|pdb|2ZDW|B Chain B, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261123|pdb|2ZDW|C Chain C, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261124|pdb|2ZDW|D Chain D, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311752|pdb|3A4Y|A Chain A, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311753|pdb|3A4Y|B Chain B, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311754|pdb|3A4Y|C Chain C, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311755|pdb|3A4Y|D Chain D, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 49/267 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-----PGVDLVFPDITF 60 + +P G E+ + L G + +++DCG+ K++ G D Sbjct: 1 MRIVPFGAAREVTGSAHLLLAG----GRRVLLDCGMFQGKEEARNHAPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------- 110 K + A+ +THA DH G L L+ PVYA+ + L+E Sbjct: 49 ----PKEVDAVLLTHAALDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEP 104 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + + G+ + +GA S+ + H +P + +V + +V++GD Sbjct: 105 FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGH-LPGSAFVVAQGEGRTLVYSGDL 163 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY--DIMKNA 224 + +L D + L ++ + T R E +++ + + + Sbjct: 164 GNREKDVLPDPS-LPPLA-------DLVLAEGTYGDRPHRPYRE-TVREFLEILEKTLSQ 214 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 G VL+ TF+ V R + I+ + G Sbjct: 215 GGKVLIPTFA--VERAQEILYVLYTHG 239 >gi|50304897|ref|XP_452404.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74636942|sp|Q6CUI5|YSH1_KLULA RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|49641537|emb|CAH01255.1| KLLA0C04598p [Kluyveromyces lactis] Length = 764 Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 47/275 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L F LGG E+G + + Y K +M+D G+ L P Sbjct: 11 KDHLRFFSLGGSNEVGRSCHILQY----KGKTLMLDAGIHPAHQGL----ASLPYYD--E 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR----------- 109 + + + I+H H DH +L + V+ + + Sbjct: 61 FDLSTIDLLLISHFHLDHAASLPYVMQRTNFRGRVFMTHPTKAIYRWLLNDFVKVTSIGD 120 Query: 110 -------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + + ++V + H + I Sbjct: 121 SPGQDSSNDNLYSDEDLAESFDRIETIDYHSTMEVNGIKFTAFHAGH-VLGAAMFQIEIA 179 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-K 215 ++ TGD+ + D L + + ++ +ST + K Sbjct: 180 GVRVLFTGDYSREVDRHLNS-------AEVPPQSSDVIIVESTFGTATHEPRQNRERKLT 232 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + + G VL+ F+ + R + I+ I ++ Sbjct: 233 QLIHTVVSKGGRVLLPVFA--LGRAQEIMLILDEY 265 >gi|115774579|ref|XP_001200107.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115963446|ref|XP_001195790.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1324 Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 36/190 (18%) Query: 2 KNEELVF-----LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP 56 K + L F + +G ++G + L GS + IM+DCG+ +D + FP Sbjct: 63 KQDSLSFARKNPVDIGAGQDVGRSCILLTIGSKN----IMLDCGMHMGFND----ERRFP 114 Query: 57 DITFIMKER---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVY 111 D ++I K +L A+ I+H H DH GAL + P+Y + + Sbjct: 115 DFSYINKNGRLTDHLDAVIISHFHLDHCGALPHMSEIVGYDGPIYMTQPTKAICPILLED 174 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVN------------------HSIPETMALVI 153 R + + V VN + I Sbjct: 175 YRKITVEKKGETNFFTSAMIKDCMKKVVVVNLHQIIQVDDELEIKAYYAGHVLGAGMFHI 234 Query: 154 RSPVGNIVHT 163 + ++V+T Sbjct: 235 KVGQQSVVYT 244 >gi|206890479|ref|YP_002249123.1| metallo-beta-lactamase superfamily [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742417|gb|ACI21474.1| metallo-beta-lactamase superfamily [Thermodesulfovibrio yellowstonii DSM 11347] Length = 459 Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 73/469 (15%), Positives = 150/469 (31%), Gaps = 76/469 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G + + L + I+I+CG+ F ++ D F + Sbjct: 18 MKIQFF--GATKTVTGSCFLLEIEKQN----ILIECGL-FQEN-----DKEFLNYEPFPF 65 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 + + + +THAH DH + L L + +P LLE Sbjct: 66 NPRKIDLVILTHAHLDHSALIPKLVKEGLRCRIITTPATKDLLEIMLFDALKVQKNENHK 125 Query: 110 ----VYERVSKKIPCISFQAGDK-VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 E + K + I K ++ SI + H I + + I+ IV +G Sbjct: 126 QLLYDEENIYKALKQIETLPYQKTLNFNGISIRFLDAGH-ILGSATVEIKINNKTIVFSG 184 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMK 222 D + IL D I L+ +ST R + E K + + I D K Sbjct: 185 DIGRTGNPILKDP--------IPPTEADYLVLESTYGNRLHKNLEESIKELIQAIKDTFK 236 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIK 275 +G V++ F+ V R + ++ I + + L + + + + Sbjct: 237 K-EGNVIIPAFA--VGRTQDLLYILNKSVRQGILEPIDVYLDSPLAEEATRIYLSHPELF 293 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA--------------QLSRGEMRNVK 321 D+ + + + + + + ++ N+ Sbjct: 294 DDEALREMRHPNRSSIKLHFIKSVEESKKLNTINSKAVIIAGSGMCQGGRIIYHLYHNI- 352 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDLK 377 E+ ++IF+ G I + E + + ++ S H ++L Sbjct: 353 YREQCSIIFAGFQAKG--TLGRKIVDGEKEVLILGKMLPVKAKIYTIGGFSAHADRDELL 410 Query: 378 RMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + I +P++ + +HGEP + K+ + + Sbjct: 411 EWLKAIKTKPEIFI-VHGEPEVIDIFKKSIEERFNFRCHCPERLSTYEI 458 >gi|222111751|ref|YP_002554015.1| beta-lactamase domain-containing protein [Acidovorax ebreus TPSY] gi|221731195|gb|ACM34015.1| beta-lactamase domain protein [Acidovorax ebreus TPSY] Length = 454 Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 69/470 (14%), Positives = 138/470 (29%), Gaps = 92/470 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG G + + L +G + +++DCG+ F + + Sbjct: 3 VSITFLGGAGTVTGSKYLVRHGGQA----LLVDCGL-FQGYKPL----RLRNWNPLPVAP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 +++ A+ +THAH DH G L L PV+ + L Sbjct: 54 QDIDAVLLTHAHLDHSGYLPLLAKDGFGGPVFCTAGTRDLCAILLPDSGHLQEEDAAFLN 113 Query: 106 EAKRVYERVSKKIP------------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 K + + + + + H I ++++ Sbjct: 114 RHKLSKHEPALPLYTRLDAQHCLSLLQVQPTHQTFEPMRGWRATFQNAGH-ILGAASVLL 172 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-KG 212 I+ +GD D +L D ++ +ST R + Sbjct: 173 EVGGRRILFSGDLGR-PDDLLMHAPD-------APPAADTVLIESTYGDRSHPPGTVLDE 224 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 + + + G +V F+ V R ++++ Q+ + + S L+ + + V Sbjct: 225 LGPALARLAARG-GVAVVPVFA--VGRAQTVMYAIAQLKAR-GEVPSGLRVYLDSPMAVS 280 Query: 273 IIKKDQLFLSDESFGLYPREQL-----------------------IVIATGSQGEPRSAL 309 + Q LS+ + ++++ L Sbjct: 281 ATELFQNHLSETRINRSELHAMARGTTLVHSVDESKALARLHGPRVILSASGMATGGRVL 340 Query: 310 AQLS--RGEMRNVKLAEKDTV-IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 L+ G+ RN+ + I E I I R V V+ Sbjct: 341 HHLALHAGDHRNMIILTGHQAGGTRGARIAAGEKTI-RIHGRDVAIRAEVVQ-----LAT 394 Query: 367 VSGHPYPNDLKRMYQWIR--PQVLVAIHGE---PLHLVAHKELALQEGIA 411 S H + L + + P+ + +HGE L + AL + Sbjct: 395 ASAHADGDQLVAWLRSMPSTPRQVYVVHGEMAAADMLRQRIDHALGCPVE 444 >gi|149245028|ref|XP_001527048.1| hypothetical protein LELG_01877 [Lodderomyces elongisporus NRRL YB-4239] gi|146449442|gb|EDK43698.1| hypothetical protein LELG_01877 [Lodderomyces elongisporus NRRL YB-4239] Length = 812 Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 75/262 (28%), Gaps = 59/262 (22%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 E F LGG E+G + + Y K IM+D G+ FP Sbjct: 9 NEESFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGMHPALSGH----ASFPFFD-- 58 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------------- 106 + + + I+H H DH +L + V+ + + Sbjct: 59 EYDLSKVDILLISHFHVDHSASLPYVMQQSNFKGKVFMTHATKAIYRWLMQDFVRVTSIG 118 Query: 107 ---------------AKRVYERVSKKIPCISFQAGDKV---------DVGAFSIESVRVN 142 E + F++ D++ ++ + Sbjct: 119 NSRSEGGGTSATGASGSLNEEGGNLYTDDDIFKSFDRIETIDYHSTMEIDGIKFTAYHAG 178 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 H + I ++ TGD+ +++ L + L+ +ST Sbjct: 179 H-VLGACMYFIEIGGLKVLFTGDYSREENRHLQA-------AEVPPTRPDILITEST--F 228 Query: 203 REGTCISEKGIKKNIYDIMKNA 224 GT S+ ++K + + Sbjct: 229 GTGTLESKAELEKKLTSHIHAT 250 >gi|110667945|ref|YP_657756.1| metal-dependent RNase [Haloquadratum walsbyi DSM 16790] gi|109625692|emb|CAJ52124.1| Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Haloquadratum walsbyi DSM 16790] Length = 538 Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 84/273 (30%), Gaps = 54/273 (19%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK- 63 +L+ P GG E+G + G IDCG+ + P+ Sbjct: 3 DLIVTPRGGGDEVGRSCYHLQAGDYD----YFIDCGLKQSET---------PEYPLFEDV 49 Query: 64 ERKNLMAIFITHAHEDHYGALH----DLWSFLHVPVYASPFAIGL--------LEAKRVY 111 + + A+FITHAH DH G L ++ + L L+ + Sbjct: 50 SQGQIDAVFITHAHIDHIGGLPVAEHHGLLDDDASIFMTRPTNALASILLHDSLQIHKQE 109 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNH-----------SIPETMALVIRSPVGNI 160 + + ++V +I R H + + + I I Sbjct: 110 TAELNQPQQFTATDIEQVLSRIMTIGYNRNQHLNITYECGDAAHLLGSAWIAIEYNDRCI 169 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V +GD + D D L +ST G + + ++ Sbjct: 170 VFSGDLGGRSAHLG----DID-----DPPEADELFLESTY----GETLQHRSFTDARTEL 216 Query: 221 MKNAKGCVL----VTTFSSSVSRIRSIIDIAEQ 249 + AK + V + +V R + I+ I + Sbjct: 217 YQQAKQAIASGIPVLIPTFAVGRAQEILQIFRE 249 >gi|114330238|ref|YP_746460.1| beta-lactamase domain-containing protein [Nitrosomonas eutropha C91] gi|114307252|gb|ABI58495.1| beta-lactamase domain protein [Nitrosomonas eutropha C91] Length = 468 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 70/459 (15%), Positives = 131/459 (28%), Gaps = 90/459 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGVGE+ + L + ++DCG F G D + T I Sbjct: 1 MQITFLGGVGEVTGSCYLVE----TDDVRFLVDCG-MFQG----GRDASRKNHTAINFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVY--ERVSKKIPCIS 122 +++ + +THAH DH G L L PVY +P LL K+ + Sbjct: 52 ESMDFVLLTHAHVDHSGLLPRLSVLGFRGPVYMTPATADLLSIILKDSAHIQEKEAEWHT 111 Query: 123 F--------------------------------QAGDKVDVGAFSIESVRVNHSIPETMA 150 + R I + Sbjct: 112 KTALRNKRSLRYENVPLYTVTQAEAFLKQMRGVNYDETCQPHPLVQCRFRDAGHIIGSAI 171 Query: 151 LVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + S IV +GD I+ D T + L+ +ST R Sbjct: 172 IEVWLKSGSRQRKIVFSGDLGQPGHPIVRDPTFI--------KEADYLLVESTYGNRCHR 223 Query: 207 CISEKGIKKNIYDIMKNA----KGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVL 256 S + + + +I+ +G ++V F+ V R + ++ + ++G + Sbjct: 224 --SMQDTRDEMVEIICQTLIHKRGNIIVPAFT--VGRTQDLLFLLTDLQRQGRLGVMDIY 279 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV--------------IATGSQ 302 + S + + D+ + ++ + L + I +G+ Sbjct: 280 VDSPMALAATEITLRHRELFDKETIDIMNWHSQHNKNLRIHFVQEVEDSIRLNHIQSGAI 339 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 S + R + + + + V Sbjct: 340 VISASGMCDAGRIKYHLKYNLPRPECSILFTGFQAAGTLGRRLVDGSKNVRVFGEQIPVH 399 Query: 363 CPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 +H S H +L + P+ +HGEP Sbjct: 400 ASIHTVGGLSAHADQENLLDWLRGFSQPPRKTFIVHGEP 438 >gi|169824737|ref|YP_001692348.1| putative metallo-beta-lactamase superfamily protein [Finegoldia magna ATCC 29328] gi|167831542|dbj|BAG08458.1| putative metallo-beta-lactamase superfamily protein [Finegoldia magna ATCC 29328] Length = 539 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 73/511 (14%), Positives = 147/511 (28%), Gaps = 96/511 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + + + + M+DCG+ +L + D + Sbjct: 1 MKITFLGAAQEVTGSCYVVE----TEKHKFMVDCGLFQGSKELEQKNHDEIDFS------ 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYE 112 ++ + +THAH DH G + L+ P+Y + L E Sbjct: 51 -DVEFMLLTHAHIDHTGRIPLLYKNGFRKPIYCTKATKDLAEIMLMDSAKIQESDVEWEN 109 Query: 113 RVSKK-------IPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 R ++ + A + + + H + + +L Sbjct: 110 RKRQRSGKPLLIPLYTTIDAMSCISLFKGRFYDEVVKINEDIRVIFRDAGH-MLGSSSLE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I I+ +GD ++ IL + G L+ +ST R Sbjct: 169 IFITENKNTTKIIFSGDIGTSNNPILNNPYVLS--------GCDYLVMESTYGNRIHEPY 220 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 E + I + G V++ +F+ V R + II + ++ V Sbjct: 221 KESVHELINIIEKVSAKG-GTVIIPSFA--VGRTQEIIYELNSY--YDYQIKDHYEKKVP 275 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 V +D + + + + + + + + + E + + E + + + Sbjct: 276 VYVDSPMALEATKAFMENTDLFNQKAKDYISSGDNVFEFENLHYVKNIDESKMLNSVKFP 335 Query: 327 TVIFSSRAIPGNEVAIGHI-KNRLVEQGVRVI-------------------------AED 360 VI SS + H+ N E+ V Sbjct: 336 RVIISSSGMATAGRVRHHLKHNLWDEKNAVVFVGYQAQGSLGRILLDGVDEVKLFGETIK 395 Query: 361 AECPVH----VSGHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + SGH N+L I+P+ + HGE +L +++ Sbjct: 396 VNAKIFNLGGFSGHADQNNLMEFVDNMKIKPKKIFITHGENDGAETLSKLLIEKYNVEAI 455 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGF 445 P I E+ D + Sbjct: 456 IPEIYSTEEFEPGNYNIEQEISTNRENNDLY 486 >gi|209876680|ref|XP_002139782.1| cleavage and polyadenylation specificity factor subunit 3 [Cryptosporidium muris RN66] gi|209555388|gb|EEA05433.1| cleavage and polyadenylation specificity factor subunit 3, putative [Cryptosporidium muris RN66] Length = 767 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 132/454 (29%), Gaps = 86/454 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SF-PKDDLPGVDLVFPDIT 59 +E L LG E+G + + + + +M DCG+ +F LP D V DI+ Sbjct: 21 SETLFIQALGAGCEVGRSCVVVTF----KGRSVMFDCGIHPAFSGIGSLPVFDAV--DIS 74 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKK 117 + +TH H DH GA+ S + ++ + + + + Sbjct: 75 S-------IDLCLVTHFHLDHSGAIPYFVSSTDFNGRIFMTEPTKAICKLVWQDYARMNR 127 Query: 118 IPCISFQAGD-------------------------------KVDVGAFSIESVRVNHSIP 146 S D + ++ I H + Sbjct: 128 FSTNSPVPVDSDEAPVSCVNLYTEPDIEKAMKRIEIIDFRQQAEIDGVRISCYGAGH-VL 186 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++ I++TGD+ +DD + I + L+C+ST R Sbjct: 187 GACMFLVEIGGVRILYTGDYSREDDRHVPR-------AEIPPVDVHVLICESTYGTRLHE 239 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGS 259 ++ K+ + + ++ R + ++ I ++ + S Sbjct: 240 PRKDRE-KRFLGCVQSILSRQGKCLLPVFAIGRAQELLLILDEHWAQTSCLHNIPIYYAS 298 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE------------PRS 307 + + I + G+ P V S E + Sbjct: 299 PMSVKCMRVFETYINQCGDAVRKQADMGINPFNFQFVKTVNSISEIKDAIYSEGPCVIMA 358 Query: 308 ALAQLSRGEMRNV-------KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 A L G R++ K ++ R P E + + + V + Sbjct: 359 APGMLQNGTSRDIFEVWAPDKRNGVILTGYAIRGTPAYE--LRREPDIIQLGDKLVPLKA 416 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + S H + ++ ++ +HGE Sbjct: 417 KFDQISFSAHSDFAQTQEFISNLKVPNVILVHGE 450 >gi|150865856|ref|XP_001385241.2| hypothetical protein PICST_89936 [Scheffersomyces stipitis CBS 6054] gi|149387112|gb|ABN67212.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 793 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 50/279 (17%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++E F LGG E+G + + Y K IM+D GV FP Sbjct: 10 ESESFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDAGVHPALTGHSS----FPFYD-- 59 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + + + I+H H DH +L + V+ + + Sbjct: 60 EYDLSKVDILLISHFHLDHAASLPYVMQHTTFKGRVFMTHATKAIYRWLLQDFVRVTSIG 119 Query: 111 ------------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + +S + +++ + H + Sbjct: 120 AGSRAEGSDETSTNLYTDDDIISSFDRIETIDYHSTMEIDGIRFTAYHAGH-VLGACMYF 178 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + ++ TGD+ +++ L + L+ +ST GT + Sbjct: 179 VEIGGLKVLFTGDYSREENRHLHA-------AEVPPTRPDILITEST--FGTGTLEPKAD 229 Query: 213 IKKNI-YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 ++K + +I V S+ + ++ I ++ Sbjct: 230 LEKRLVQNIHATLTKGGRVLMPVFSLGNAQELLLILDEY 268 >gi|14590378|ref|NP_142444.1| hypothetical protein PH0466 [Pyrococcus horikoshii OT3] gi|3256870|dbj|BAA29553.1| 514aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 514 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 113/314 (35%), Gaps = 30/314 (9%) Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 +KKI + ++ D+G F +++ V+HSI A I ++ +TGD++ Sbjct: 190 QESPKAKKIIPNEVKTLEEEDLG-FEVKAFNVDHSIYGATA-YIIEGDVSLAYTGDFR-- 245 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT-CISEKGIKKNIYDIMKNAKGCV 228 + G D+ + L+ + T R+ +SE+ + +N I++ AKG V Sbjct: 246 ---LHGRKGDETRKFIKAAKSSSILITEGTRVGRDEHGNVSEQEVYENALKIVEEAKGLV 302 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS--------LKRVVSVAIDVGIIKKDQLF 280 + + R+ IAE GR++V+ L V+ D+ I + Sbjct: 303 IADFSPRNFERLEIFKKIAENTGRELVITAKDAYFLHALQLVDNVNRLKDLRIYGNLKAT 362 Query: 281 LSDES----FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 +G Y + + E + + T I+SS Sbjct: 363 QDKWESIVVWGNYAEQYISPFEIRKNQENYILCFSFYDMPHLLDIMPDGGTYIYSSSEAF 422 Query: 337 GNEV--AIGHIKNRLVEQGVRVIAEDAEC--------PVHVSGHPYPNDLKRMYQWIRPQ 386 G E + + N L G V + H SGH +L+++ I P Sbjct: 423 GEEQVFSFLRLWNWLQYFGFEVHGFRVDKYGKPIFEKGFHASGHISREELRKVIDEIDPD 482 Query: 387 VLVAIHGEPLHLVA 400 ++ +H E L Sbjct: 483 YVIPVHTEKPELFK 496 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 + A+ I+HAH DH G + L ++ + SP I +L+A Sbjct: 89 QVNAVLISHAHLDHVGNITLL--DENISIVGSPMTITILKA 127 >gi|259047981|ref|ZP_05738382.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259035401|gb|EEW36656.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 430 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 126/347 (36%), Gaps = 34/347 (9%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 A+FI+HAH DH L+ L ++P+Y ++ + E S Sbjct: 87 AVFISHAHLDHTRMLNYL--DPNIPLYTLKETKMIVNSLNRNGVFLLPSPFEDESFTRDM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I AGD + VG +E VRV+H AL+I++P +I +TGD +L D + Sbjct: 145 IGLDAGDVIKVGEIEVEIVRVDHDAYGAAALIIKTPGHHITYTGDLRL-HGHNAEDTIEF 203 Query: 181 DSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSS 235 + EG+ D + +E+ + + I + +N + + + Sbjct: 204 CKKAKHTDILMMEGVSISFGDRPAEVEAFKPETEEDVIRQIAFLEKENPHRQITFNGYPA 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V R I++ + + + LK V + + P E L+ Sbjct: 264 NVRRFEKIVEGTSRTVVLEATMAALLKEVFQKEAHYYYREGAPRLEELDPALEIPYETLL 323 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + +L E I S ++ + + + L E+ + Sbjct: 324 EDTSEYLWQVVDHFDRL----------QEGSLYIHSDAQPLGDFDPNYQPFLDLLAEKNI 373 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 + + SGH P DL R+ I P+ L+ IH L+ + Sbjct: 374 EFV------RLACSGHAKPEDLDRIIAMIEPKCLIPIHTLKPELLEN 414 >gi|299752177|ref|XP_001830756.2| mRNA 3'-end-processing protein YSH1 [Coprinopsis cinerea okayama7#130] gi|298409712|gb|EAU91125.2| mRNA 3'-end-processing protein YSH1 [Coprinopsis cinerea okayama7#130] Length = 846 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 138/450 (30%), Gaps = 75/450 (16%) Query: 1 MKNEE-LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFP 56 M + + L LG E+G + + Y K ++ D GV + P +D Sbjct: 1 MADSQSLKVTMLGAGQEVGRSCCVLQY----RGKTVVCDTGVHPAYSGMASLPFID---- 52 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEAKRVY 111 D+ + + AI +TH H DH AL + + VY + + + Sbjct: 53 DLDW-----STVDAILVTHFHLDHAAALTYITEKTNFRDGKGKVYMTHPTKAVHKFMMQD 107 Query: 112 E-RVSKKIPCISFQAGDKVD----------------VGAFSIESVRVNHSIPETMALVIR 154 R+S F D S H + +I Sbjct: 108 FARMSSSTSDALFSPLDMQMSLASIIPVSAHQLINVCPGVSFTPYHAGH-VLGACMFLID 166 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 I++TGD+ ++D L + L+ +ST + EK + Sbjct: 167 IAGLKILYTGDYSREEDRHLVK-------AELPPIRPDVLIVESTYGVHTLEGREEKEAR 219 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS 266 + + G VL+ F+ + R + ++ I ++ + SSL R Sbjct: 220 FTTLVHSIIRRGGHVLLPAFA--LGRAQELLLILDEYWKKHPDLHNVPIYYASSLARKCM 277 Query: 267 VAIDVGI----------IKKDQLFLSDESFGLYPREQLI--VIATGSQ----GEPRSALA 310 I K + P+ + IA G P Sbjct: 278 AVYQTYIHTMNANIRTRFAKRDNPFVFKYISNLPQTRGWEKKIAEGPPCVVLASPGFMQV 337 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 SR ++ +I + +I G + ++ + +G + + + + S Sbjct: 338 GPSRELFELWAPDARNGLIITGYSIEGTLARDIMTEPEDFIGLKGNTIPRKISVDYISFS 397 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 H Q ++ Q +V +HGE + Sbjct: 398 AHVDYAQNSEFIQAVKAQHVVLVHGEQNTM 427 >gi|73998860|ref|XP_535018.2| PREDICTED: similar to DNA-crosslink repair gene SNM1 [Canis familiaris] Length = 1074 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 114/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL++K +K + Sbjct: 761 AYFLTHFHSDHYAG---LSKNFTFPVYCSEITGNLLKSKL----HVQKQYIHPLPMDTEC 813 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P GN+ +HTGD++ D + Sbjct: 814 IVNGVKVVLLDANH-CPGAVMILFYLPNGNVLLHTGDFRADPTMER---------SRLAG 863 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E + S++ + + + A VLV + S+ + + + Sbjct: 864 QKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRVLVVCGTYSIGKEKVFLA 923 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G ++ + + + I F++ + L+ + + Sbjct: 924 IADVLGSRVA-----MSQEKYKTLQCLNIPDLNSFITTDMCNSLVH--LLPMMQINFKAL 976 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +S L + + + + + + ++ + + Sbjct: 977 QSHLKKCGGEFNQILAFRPTGW-------------THSNQLTNIRDIVPQIKGNISIYGI 1023 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +LKR QW++PQ ++ Sbjct: 1024 PYSEHSSYLELKRFVQWLKPQKIIPT 1049 >gi|254519702|ref|ZP_05131758.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913451|gb|EEH98652.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 431 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 122/342 (35%), Gaps = 32/342 (9%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK---------RVYERVSKKIPC 120 A+F++H H DH ++ L +P+Y LL Sbjct: 88 AVFLSHVHLDHSKIVNYLNPE--IPLYTLEGTKSLLNTLNINNDFLFPLHESNGKNTRDI 145 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 + + + +++G ++ + V+H L+I +P I +TGD +L + Sbjct: 146 VGVKENEVIEIGKIKVKVMPVDHDAYGASGLLIETPDLVISYTGDIRL-HGYRKEATLNF 204 Query: 181 DSLCAIGN----EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-CVLVTTFSS 235 + EG+ D + + + +E + + I +I+ N + + S Sbjct: 205 CKESENCDVLLIEGVSVSFQDFDDDVSDKEITNEPELIEKINEIVNNNPNKQITFNYYIS 264 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 ++ RI +II + ++ S + + + D + E L Sbjct: 265 NIERILNIIKT--NSRKVVLDAYYSYVLKEATGYESYYYQLDNGDYGLDENLKIDFEAL- 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 +G L +L+ M +K E I S + + + A N+ E + Sbjct: 322 ---LNDEGSFFWQLDKLAIEHMDKLK--EGGIYIHSNAVPLGDFDPAYTPFVNKFEEMNI 376 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + V SGH +P DL ++ I+P++LV IH Sbjct: 377 KF------ERVSCSGHAHPYDLIKIINLIKPKLLVPIHSYRP 412 >gi|325957408|ref|YP_004292820.1| hypothetical protein LAC30SC_08910 [Lactobacillus acidophilus 30SC] gi|325333973|gb|ADZ07881.1| hypothetical protein LAC30SC_08910 [Lactobacillus acidophilus 30SC] gi|327184116|gb|AEA32563.1| hypothetical protein LAB52_08230 [Lactobacillus amylovorus GRL 1118] Length = 431 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 142/450 (31%), Gaps = 89/450 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-- 60 ++ G+ IG M Y ++ D G ++ +L PD ++ Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLG------EVYRPELKLPDESYQT 53 Query: 61 IMKER---------------KNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYAS 98 ++K + K + A +I+H H DH L+ L +P+YA Sbjct: 54 LIKNQLIGDVPNFYDPKITGKPIDTERWEHSAAYISHLHLDHSKVLNLLAPE--IPLYAG 111 Query: 99 PFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P LL A + P I+ + + VG ++E +H Sbjct: 112 PITAHLLPALNENGDFLLPAAGHEKNYTRPIIAAEYKKPIKVGDITLEIYPSDHDAYGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L++++P I +TGD + + G D +G L+ + T Sbjct: 172 GLLVKTPDKQIAYTGDIR-----LHGYHPDLVRAFMQAAKGSDMLIIEGTGVSWPEEKHD 226 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII-DIAEQIGRKIVLLGSSLKRVVSVA 268 E + K V +T + R+++ D + L+ V Sbjct: 227 ENS------EEFTGPKNEVELT---EEIVRLQNANPDRQITFNTYPTNVERLLRIVSDSP 277 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA--------QLSRGEMRNV 320 V + K + D YP L + + S L +L + + Sbjct: 278 RKVVLHAKRAHLIKDSLNEDYPYYYL------PEDKKYSDLNPELEVSYDELLADNHKYL 331 Query: 321 --------KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 KL I S + + + + + + IA + SGH Sbjct: 332 WQAVSDYDKLQMGGLYIHSNAEPLGDFDPTYKPFVEQFAKNKIEFIA------LRCSGHA 385 Query: 372 YPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 +LK + I+P +LV +H L + Sbjct: 386 DEKELKEIIGGIQPAILVPVHTLHPELEEN 415 >gi|260102986|ref|ZP_05753223.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083197|gb|EEW67317.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|328464554|gb|EGF35925.1| hypothetical protein AAULH_10060 [Lactobacillus helveticus MTCC 5463] Length = 431 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 139/438 (31%), Gaps = 65/438 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD--LPGVDLV 54 ++ G+ IG M Y ++ D G + P + + + Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELKLPDESYQTLIKNEL 59 Query: 55 FPDITFIMKERKNLMAI----------FITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 D+ + AI +I+H H DH A++ L +P+YA L Sbjct: 60 IGDVPNFYDPKITGKAIDTDRWEHAAAYISHLHLDHSKAMNLLAPE--IPLYAGSITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A S P I+ + + VG ++E +H L++R+ Sbjct: 118 LPALNEKGDFLLPAAGHDKSYTRPIIAAEYKKPIQVGDITLEIYPSDHDAYGATGLIVRT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 P I +TGD + + G D+ + G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDRVREFMKASRGSDMLIIEGTGVSWPEEKHDENS--- 229 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSII-DIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + K V +T + R+++ + + L+ + V + Sbjct: 230 ---EEFTGPKNEVELT---EEIVRLQNENPERQITFNTYPTNVERMLRIIADSPRKVVLH 283 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA--QLSRGEMRNV--------KLAE 324 + + + YP L S P ++ +L + + + KL E Sbjct: 284 AERAHLIKESLDEDYPYYYLPQDKKYSDLNPELEVSYDELLKDNHKYLWQVVTDYDKLRE 343 Query: 325 KDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 I S + + + A + + + + SGH +LK + I Sbjct: 344 GGLYIHSNAEPLGDFDPAYKPFVEQFAKNNIEF------KALRCSGHADEKELKEIIAGI 397 Query: 384 RPQVLVAIHGEPLHLVAH 401 +P +LV +H L + Sbjct: 398 QPAILVPVHTLHPELEEN 415 >gi|229043545|ref|ZP_04191254.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH676] gi|228725767|gb|EEL77015.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH676] Length = 417 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 53/445 (11%), Positives = 130/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 5 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIE---------REAVPFLDA 51 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 52 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNAMQGWNLPYSDQH 111 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ D Sbjct: 112 IKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSADS 171 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + ++ G + A + + + +I + + + Sbjct: 172 NILRANLP--------EKLGYNIKIAIVDAAYHTDDVSQNERVNELCAEIERVMQNKGIA 223 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 224 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEEFKWIMESLK 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 284 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 337 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V V H D+K M + P+ V +H Sbjct: 338 GSF--------AEKVMKEHVRNTCRVNRVAYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 389 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 390 DTDRLQQKLSSAGYENVYSLAMERI 414 >gi|172065477|ref|YP_001816189.1| beta-lactamase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171997719|gb|ACB68636.1| beta-lactamase domain protein [Burkholderia ambifaria MC40-6] Length = 470 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 82/276 (29%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +GS + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLIEHGS----RRVLVDCGL-FQGTK----NLRLRNWQPLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLHAVVLTHAHLDHSGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + + H I ++V+ Sbjct: 112 RHGYSKHHPAQPLYTLDDAQRALRLLKPVAYDECTALGGDLAFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ ++ +ST R + Sbjct: 171 HWDHKVLAFSGDLGRYHDPIMQPP--------RPPAHADYVVVESTYGDRLHPASDPEDE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++D G V++ F+ V R + I+ + Sbjct: 223 LATMFDKTFARGGVVVIPCFT--VGRAQEILHYIAR 256 >gi|68489322|ref|XP_711502.1| hypothetical protein CaO19.12941 [Candida albicans SC5314] gi|68489371|ref|XP_711478.1| hypothetical protein CaO19.5486 [Candida albicans SC5314] gi|74584420|sp|Q59P50|YSH1_CANAL RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|46432783|gb|EAK92250.1| hypothetical protein CaO19.5486 [Candida albicans SC5314] gi|46432809|gb|EAK92275.1| hypothetical protein CaO19.12941 [Candida albicans SC5314] Length = 870 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 49/251 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E F LGG E+G + + Y K IM+D G+ FP Sbjct: 97 EENFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDSGMHPALSGH----ASFPYFD--E 146 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + V+ + + Sbjct: 147 YDISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGN 206 Query: 111 ----------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 + + K I +++ + H + I Sbjct: 207 SRSEDGGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGH-VLGACMYFI 265 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 ++ TGD+ +++ L + L+ +ST GT + Sbjct: 266 EIGGLKVLFTGDYSREENRHLHA-------AEVPPLKPDILISEST--FGTGTLEPRIEL 316 Query: 214 KKNIYDIMKNA 224 ++ + + Sbjct: 317 ERKLTTHIHAT 327 >gi|154422115|ref|XP_001584070.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] gi|121918315|gb|EAY23084.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] Length = 588 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 66/511 (12%), Positives = 146/511 (28%), Gaps = 74/511 (14%) Query: 2 KNEEL--VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 K +E+ + G GE+G + L GS K +++DCGV+F D P Sbjct: 7 KKKEVHCQLICFGAGGEVGRSSILVEIGS----KKVLLDCGVNFTATDE---KDRLPAY- 58 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKR-------- 109 + + I+H H DH A+ L L PVY + + ++ Sbjct: 59 --QDPFPKVDLVLISHIHTDHLAAVPYLTEVLKCQAPVYMTRASQMMMPIMLDDFLKVTE 116 Query: 110 -----VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + K + + + +++ H I ++ + ++T Sbjct: 117 NPPYKAEDLTNCKPKIKVVEFYSRFEAAPGIFVQAFPAGH-ILGAACFFVQVRGLSFIYT 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIM 221 GD+ D L L+ +ST R+ E+ + ++ ++ Sbjct: 176 GDFSAIADHHLSGHAVPRLFP-------DLLITESTYGNQVRDSIAKRERSFVQMVHQVV 228 Query: 222 KNAKGCVLVTTFSSSVSRIRSII------------------------DIAEQIGRKIVLL 257 G VL+ F+ V R++ I + + + + + Sbjct: 229 GEG-GKVLIPVFA--VGRLQEICLMLEDYWNRMGYTEPIYYTTNLGENCMKVYKQCVNWM 285 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP----RSALAQLS 313 +++ + + + + L+++AT P + Sbjct: 286 NPTVQTNLFDNGSTAFKFTYSRNFNPKKSKIDESRGLVMLATSGMLNPGTPAFNFFVNEK 345 Query: 314 RGEMRN----VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + +R V +I + + S Sbjct: 346 WYDDPRNMVIFPGYCGPNTFGRAVLTRDLTTNRVQFTSRRPAMTVDIIIKCKVERISFSA 405 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 H ++ + +RP +V IHG+ + A + + P Sbjct: 406 HADQFEIISLCDRVRPSKVVTIHGDKPSVDALA-TRITQTTGIPAEAPRNNAKVTTPTKN 464 Query: 430 EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQ 460 + + + + R + Sbjct: 465 PNVISISRDCVNFALGQPSACEGVILKDRDR 495 >gi|325912000|ref|ZP_08174402.1| ribonuclease J 2 family protein [Lactobacillus iners UPII 143-D] gi|325476185|gb|EGC79349.1| ribonuclease J 2 family protein [Lactobacillus iners UPII 143-D] Length = 155 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 4/150 (2%) Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 +K+ D V ++ E + + + G V + H SGH DL+ + Sbjct: 2 IKIKNGDLVFIATTPSHSVETMVAQTSDIIYRSGGIVKQLGYDK--HTSGHATGRDLQML 59 Query: 380 YQWIRPQVLVAIHGEPLHLVAHKELALQ--EGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 ++P+ L+ + GE L HK LA++ + +NG L L D + D V Sbjct: 60 IDTLKPKYLIPVIGEYRLLEIHKNLAVEAGMDPENIYITKNGDCLLLDDDKFYLTDPVPA 119 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHL 467 + DG +G ++ + R LS G+ Sbjct: 120 EDTMIDGSGVGDVGNIVLRDREILSDDGYF 149 >gi|161522914|ref|YP_001585843.1| beta-lactamase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189348255|ref|YP_001941451.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|160346467|gb|ABX19551.1| beta-lactamase domain protein [Burkholderia multivorans ATCC 17616] gi|189338393|dbj|BAG47461.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|325521096|gb|EGD00014.1| metallo-beta-lactamase family protein [Burkholderia sp. TJI49] Length = 467 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 71/449 (15%), Positives = 128/449 (28%), Gaps = 86/449 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +G + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLVEHG----GRRVLVDCGL-FQGTK----NLRLRNWRTLPLAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY + L + + Sbjct: 52 DTLDAVVLTHAHIDHTGYLPVLVREGYRGPVYCTAATAELCDIMLRDSARLQEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + GA S + H I ++V+ Sbjct: 112 RHGYSKHHPAQPLYTLDDAQRALRLLTPVAFDECTALGGAVSFRLLPAGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ L+ +ST R E Sbjct: 171 HWDQKVLAFSGDLGRYHDPIMQPP--------RPPAHADYLVIESTYGDRLHPASDPENE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG------RKIVLLGSSLKR--- 263 + + G V++ F+ V R + I+ ++ R V + S + Sbjct: 223 LAEMFDKTFARG-GVVVMPCFT--VGRAQEILHYIARLKASGRMARVPVFVDSPMATDVT 279 Query: 264 ------------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG---SQGEPRSA 308 VS A +G + +++IA + G Sbjct: 280 EIYRHHILEHRLTVSEANALGHAATMIRSVDQSKAIAEHHGPMVIIAGSGMATGGRVLHH 339 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 LA+ + + L A+ +E + I V +V E +S Sbjct: 340 LARYAPDARNTIALVGYQAAGTRGAALAAHEPTL-KIHGEYVRVRAQV-----ESITTLS 393 Query: 369 GHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 H ++ + + P HGEP Sbjct: 394 AHADYEEILKWLGTMPCAPVRTFVTHGEP 422 >gi|324325809|gb|ADY21069.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 419 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 61/446 (13%), Positives = 140/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---KRVYERVSKKIP------ 119 A+F++H HEDH L L + ++ + + L A K +++ Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWHVPYTDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + V + + + + ++ + ++GD+ + Sbjct: 113 NVKDLNYVYIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L + I + D+ + I + +I + A + Sbjct: 173 SNIL------RANLPEKLHGDIKVAIVDAAY--HTDDVSQHERINELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 225 TLLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFQQMFAYKDWIKNNEELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ +++++IF+ Sbjct: 285 KRNIIVMDDDSGTQHSYGIVVMSDANMQTKRAQLY------YEQLRHEKRNSIIFTGHIA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSIRDVKEMLNTLSPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|30019830|ref|NP_831461.1| zinc-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29895375|gb|AAP08662.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus cereus ATCC 14579] Length = 976 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 55/445 (12%), Positives = 132/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 564 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REAVPFLDA 610 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 611 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVLQGWNLPYSDQH 670 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ V + + + + ++ + ++GD+ + Sbjct: 671 IKDLNYVCIDEISNPNKWVQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 730 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + + +I + + + Sbjct: 731 NIL------RANLPEKLGHNIKIAIVDAAY--HTDDVSQNERVNELCAEIERVMQNKGIA 782 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 783 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEEFKWIMESLK 842 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 843 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 896 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V E V H D+K M + P+ V +H Sbjct: 897 GSF--------AEKVMKEHVGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 948 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 949 DTDRLQQKLSTAGYENVYSLAMERI 973 >gi|300778243|ref|ZP_07088101.1| beta-lactamase family protein [Chryseobacterium gleum ATCC 35910] gi|300503753|gb|EFK34893.1| beta-lactamase family protein [Chryseobacterium gleum ATCC 35910] Length = 464 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 75/472 (15%), Positives = 146/472 (30%), Gaps = 81/472 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + LGG + + + + I+IDCG+ G+ + ++ Sbjct: 2 ETITLKSLGGAETVTGS----KHLLKTPELTILIDCGL------FQGIKY-LREQNWLPL 50 Query: 64 ERK--NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERV 114 + AI +THAH DH G + + +Y + L + AK E Sbjct: 51 NTDVSKIDAIILTHAHLDHCGYIPLIVKNGFKGKIYMTGPTKELTKLILLDSAKLQEEDA 110 Query: 115 SKKIPCI------------------------SFQAGDKVDVG-AFSIESVRVNHSIPETM 149 K ++ +G S H I Sbjct: 111 EKANRHHYTRHHPAKPLYTVNDAERSFKQFFVIDENVEIKLGDHISCIFKPCGH-IIGAC 169 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 ++ I IV +GD + A+L D L+ +ST R Sbjct: 170 SVKITCFGKTIVFSGDIGRNHSAVLA-PPDF-------FTQSDFLVMESTYGDRLHDQKD 221 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSL 261 ++ ++ A G +++ F+ V R + I+ I ++ G ++L Sbjct: 222 LSNQLEHWINLTIKAGGNIIIPCFA--VGRAQEILYILQELKDSNKIPAGVPVILDSPMA 279 Query: 262 KRVVSVA-IDVGIIKKDQLFLSDESFGLYPREQLI----VIATGSQGEPRSALAQLSRGE 316 + D+ +D +Y + +IA + ++ G Sbjct: 280 ASATEIMVRYSDYTLVDRQKWNDIIGKIYITKDYTETQEIIAQKQSKIVIAGSGMITGGR 339 Query: 317 ----MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VS 368 +++ ++TV+ G + N+ E + D + +S Sbjct: 340 VLEYLKHYIGDSRNTVLIVGFQAEG--TRGRALLNQSHELKMHGKYYDVRAHIAEITGLS 397 Query: 369 GHPYPNDLKRMYQW--IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 H ++L + I P+ ++ +HGEP L A + E V + Sbjct: 398 AHADQSELIDWVKKYEIPPKQIMLVHGEPSALEALRVKIQTELQIPVNIPKK 449 >gi|331746818|ref|YP_004422855.1| hypothetical protein TERMP_02240 [Thermococcus barophilus MP] gi|315185029|gb|ADT85213.1| hypothetical protein TERMP_02240 [Thermococcus barophilus MP] Length = 513 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 117/308 (37%), Gaps = 30/308 (9%) Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 +KKI + D+ D+G F +++ V+HSI A I ++ +TGD++ Sbjct: 189 QESPKAKKIIPNEVKTLDEEDLG-FEVKAFHVDHSIYGATA-YIIEGDISLAYTGDFR-- 244 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT-CISEKGIKKNIYDIMKNAKGCV 228 + G D+ + L+ + T R+ SE+ + +N I+++AKG V Sbjct: 245 ---LHGGKGDETRKFIKAAKNSSVLITEGTRVGRDEHGNTSEQEVYENALKIVEDAKGLV 301 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL------- 281 + + R+ S IAE GR++V+ + ++ + GI + + L + Sbjct: 302 IADFSPRNFERLESFKKIAENTGRELVVTAKDAYFLHALQLVDGINRLEGLRIYGNFKAT 361 Query: 282 -----SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 S G Y + + E + + T I+SS Sbjct: 362 QDKWESIIVHGNYAEQYISPFEIRENQENYILCFSFYDMPHLLDIMPDGGTYIYSSSEAF 421 Query: 337 GNEV--AIGHIKNRLVEQGVRVI--------AEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 G E + + N L G V E +H SGH +L+ + + I P Sbjct: 422 GEEQVFSFLRLWNWLQYFGFEVHGFEVDKYGMPIFEKGLHASGHISREELREVIEEIDPD 481 Query: 387 VLVAIHGE 394 ++ +H E Sbjct: 482 YVIPVHTE 489 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 36/125 (28%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----------GV-DL----VFP 56 G IG + +++D G++F K L G+ DL + P Sbjct: 8 GADTIGG----TKIHIEENGNGLLLDFGMNFAKYSLYYEEYLGERTSRGIYDLWKLNLIP 63 Query: 57 DITFIMKE--------------RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 + K+ + + A+ I+HAH DH G + L ++P+ SP I Sbjct: 64 KLNIYRKDLIPKDLALEISQCSKPQVNAVLISHAHLDHVGNITLL--DENIPIVGSPTTI 121 Query: 103 GLLEA 107 +L+A Sbjct: 122 AILKA 126 >gi|238882385|gb|EEQ46023.1| hypothetical protein CAWG_04366 [Candida albicans WO-1] Length = 783 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 49/251 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E F LGG E+G + + Y K IM+D G+ FP Sbjct: 10 EENFKFFGLGGCNEVGRSCHIIEY----KNKVIMLDSGMHPALSGH----ASFPYFD--E 59 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + V+ + + Sbjct: 60 YDISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGN 119 Query: 111 ----------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 + + K I +++ + H + I Sbjct: 120 SRSEDGGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGH-VLGACMYFI 178 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 ++ TGD+ +++ L + L+ +ST GT + Sbjct: 179 EIGGLKVLFTGDYSREENRHLHA-------AEVPPLKPDILISEST--FGTGTLEPRIEL 229 Query: 214 KKNIYDIMKNA 224 ++ + + Sbjct: 230 ERKLTTHIHAT 240 >gi|229109245|ref|ZP_04238844.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock1-15] gi|228674255|gb|EEL29500.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock1-15] Length = 417 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 54/445 (12%), Positives = 131/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 5 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIE---------REAVPFLDA 51 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 52 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNAMQGWNLPYSDQH 111 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ D Sbjct: 112 IKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSADS 171 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + ++ G + A + + + +I + + + Sbjct: 172 NILRANLP--------EKLGYNIKIAIVDAAYHTDDVSQNERVNELCAEIERVMQNKGIA 223 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 224 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEEFKWIMESLK 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 284 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 337 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V E V H D+K M + P+ V +H Sbjct: 338 GSF--------AEKVMKEHVGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 389 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 390 DTDRLQQKLSSAGYENVYSLAMERI 414 >gi|168334228|ref|ZP_02692429.1| beta-lactamase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 374 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 37/278 (13%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-----KER 65 LGG +G + G + I++D G+ K+ L + P++ + Sbjct: 6 LGGGQNVGASCYFLKLGKSN----ILLDAGIGIDKEGL----VFTPNLHALKTSPFINSL 57 Query: 66 KNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKR-----------VYER 113 + IFI+HAH DH G L + Y + L + + ER Sbjct: 58 SQIDEIFISHAHLDHVGYLTHVATESTQANTYMTAVTKALTKYQLYDRVYSNANARELER 117 Query: 114 VSKKI---PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ K IS + +S H IP M ++ I++TGD+ + + Sbjct: 118 LATKSVLDRIISVTYAKTIKFRNYSATFFPAGH-IPGAMMILFEYRNSKILYTGDYSIAN 176 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + D I ++ ++ ++ GI K I I K V Sbjct: 177 SPLTSGCFDFSGF------KIDTMIMCGLHSKHSSYAKNQNGIYKTIEKIYKQIFLGRSV 230 Query: 231 TTFSSSVSRIRSIIDIAEQIGRK--IVLLGSSLKRVVS 266 + + +++ + + ++ ++ + +L V+ Sbjct: 231 SCQVNQLTKGVEFLKLLNDFNQQDILIYVDKNLLNVIE 268 >gi|48478015|ref|YP_023721.1| mRNA 3'-end processing factor [Picrophilus torridus DSM 9790] gi|48430663|gb|AAT43528.1| mRNA 3'-end processing factor [Picrophilus torridus DSM 9790] Length = 405 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 70/409 (17%), Positives = 132/409 (32%), Gaps = 58/409 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD-ITFIMKERKNLMA 70 GG E+G IMID GV PD + + Sbjct: 2 GGAEEVGR----LAIKIEDKNDKIMIDYGVE-------------PDKPPEYPLPPEPVND 44 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEAKRVYERVSKKIPC------ 120 IFITHAH DH GAL + ++A+ ++ R+ + Sbjct: 45 IFITHAHLDHTGALPVYYHNYSAKLHATAMTANSVVPIINDSLKIMRLENYVERFNEDDV 104 Query: 121 -------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 ++ + +++ + + H IP + ++ Sbjct: 105 ENLFRSLVTERYNTDIELNNLTARAYSAGH-IPGSSMWRFEDSFSFMI----------TG 153 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMKNAKGCVLVT 231 D + L L+ +ST A R+ E K +K +I + + N G V++ Sbjct: 154 DLYTRDTNLLKGARPVKTDVLIMESTYAGRDHEDRDEVIKRLKDSIKETIDNG-GKVILP 212 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 TF+ + R + +I I + I + G G +K LF + R Sbjct: 213 TFA--IGRTQEMIMILRDMNYNIYVDGMGNDISRIYLDTPGFLKDYSLFRKSLGRVIKVR 270 Query: 292 EQLIVIATGSQGEPRSALAQLSR-----GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 + + G+ + + G + ++ K + + + G ++ Sbjct: 271 NKRMRKEALENGDIIITTSGMLDGGPVLGYIDSLSDDPKSAIYLTGYQVEG-TNGRSLME 329 Query: 347 NRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 N ++ I + +S H +DL + + I P +V HG+ Sbjct: 330 NGTIKIAGATIKPSMKIDFFDLSAHAGHSDLVKFIKDIDPGTVVLCHGD 378 >gi|209517709|ref|ZP_03266546.1| beta-lactamase domain protein [Burkholderia sp. H160] gi|209501884|gb|EEA01903.1| beta-lactamase domain protein [Burkholderia sp. H160] Length = 454 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 81/276 (29%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L I++DCG+ F +L + + Sbjct: 1 MKLTFLGASETVTGSKYLLE----EPGLRILVDCGL-FQGLK----NLRLRNWASLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 ++ A+ +THAH DH G L L PVY +P L E AK E Sbjct: 52 DSIDAVLLTHAHLDHSGYLPLLARNGFRGPVYCTPGTAALCEIMLPDSAKLQEEEADFAN 111 Query: 119 PCISFQAGDKVDV-------------------------GAFSIESVRVNHSIPETMALVI 153 + + + + H I ++V+ Sbjct: 112 RHGFSKHRPALPLYTQDDAQRALHLLAPRRFDTPVELPHGLCFRFLPSGH-ILGAASVVL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D L+ +ST R + + Sbjct: 171 CRNHKLLAFSGDVG--------RPADPIMRAPTPLAHADYLVVESTYGDRLHPDSNPQDE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + I++ G V++ F+ V R + I+ + Sbjct: 223 LERIFNRTFAKGGVVVMPCFA--VGRAQEILYYIAK 256 >gi|42780885|ref|NP_978132.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|42736806|gb|AAS40740.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 419 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 62/452 (13%), Positives = 138/452 (30%), Gaps = 72/452 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMK 63 + GG GE G + Y + I+ DCG++ +D P ++ V P Sbjct: 1 MRIEVWGGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF------ 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------V 114 L A+F++H HEDH L L + ++ + + L A R Sbjct: 51 ----LDAVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWH 106 Query: 115 SKKIPCISFQ-----------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + V + + + + ++ + ++ Sbjct: 107 VPYTDQHVKDLNYVYIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLLDMSHTYVFYS 166 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ + + + + +L + I + D+ + I + +I + Sbjct: 167 GDYSAESNIL------RANLPEKLHGDIKVAIVDAAY--HTDDVSQHERINELCTEIERA 218 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAI 269 A + + R + I+ + G + + + Sbjct: 219 AGNKGITLLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFQQMFAYKDWIKNNEELE 278 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 ++ K + + D+ G ++V++ + R+ L ++ E++++I Sbjct: 279 ELMESLKRNIIVMDDDSGTQHSYGIVVMSDANMQTKRAQLY------YEQLRHDERNSII 332 Query: 330 FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 F+ G+ RV E V H D+K M + P+ V Sbjct: 333 FTGHIAKGSF--------AEKVLKERVGKECRVKRVPYKVHQSIRDVKEMLNTLSPEHTV 384 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H ++ G V + ++ Sbjct: 385 LVHALKEDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|167566691|ref|ZP_02359607.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis EO147] Length = 459 Score = 92.1 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 80/280 (28%), Gaps = 54/280 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L PVY + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPVYCTHGTAELAEIMLMDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTVDDAQRALQRLAPREFDAPTPLAGNLHFRFLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ + L+ +ST R E Sbjct: 171 CWRHTLLAFSGDLGRPHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPEAE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 223 LASVFSKTFARG-GVVVMPCFT--VGRAQEILHYIAQLKK 259 >gi|254582142|ref|XP_002497056.1| ZYRO0D14410p [Zygosaccharomyces rouxii] gi|238939948|emb|CAR28123.1| ZYRO0D14410p [Zygosaccharomyces rouxii] Length = 772 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 75/273 (27%), Gaps = 43/273 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 +N F LGG E+G + + Y K +M+D GV P Sbjct: 6 RNNSFKFFSLGGSNEVGRSSHMLQY----KNKTVMLDAGVHPAYQGY----ASLPYYD-- 55 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + + + I+H H DH +L + V+ + + Sbjct: 56 EFDLSKVDILLISHFHVDHAASLPYVMQKTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIG 115 Query: 111 -------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + + VDVG + H + I Sbjct: 116 NSATGKDENLYTDEDLAESFDRIETIDYHSTVDVGGIKFTAYHAGH-VLGAAMFQIEIAG 174 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 ++ TGD+ + D L I L+ +ST + +K Sbjct: 175 LRVLFTGDYSRELDRHLNS-------AEIPPFPSDVLIVESTFGTATHEPRINRE-RKLT 226 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + ++ I ++ Sbjct: 227 QLIHSTVTKGGRVLLPVFALGRAQELMLILDEY 259 >gi|149189207|ref|ZP_01867494.1| hypothetical protein VSAK1_09623 [Vibrio shilonii AK1] gi|148836961|gb|EDL53911.1| hypothetical protein VSAK1_09623 [Vibrio shilonii AK1] Length = 450 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 113/331 (34%), Gaps = 49/331 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + + ++IDCG+ F D L D + K++ A+ Sbjct: 13 GGKDTVTGSC----HELAINGESVLIDCGL-FQGADSYNPTLKI-DFS-----LKHVRAL 61 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYAS---------------PFAIGLLEAKRVY---- 111 +THAH DH G L L++ P+Y + + L ++KR Sbjct: 62 ILTHAHIDHIGRLPWLFAAGFRGPIYCTQATAYLVPLMLSDGLKLTLDLSKSKRTQFIDL 121 Query: 112 -ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLD 169 + K I + G F+ I + + ++ P I V +GD + Sbjct: 122 IFKHLKPINYSEWTPIKSNYGGYFTYVRFNPAGHILGSAYIELKLPKDEIAVFSGDLGPN 181 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 +L D I + L +ST + I ++ ++ + I ++ K Sbjct: 182 HTPLLPDP--------IPPKRADYLFLESTYGNKCHESIDKRT-ERLLAIIKRSLKDGGA 232 Query: 230 VTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 + + SV R + ++ E + +++ S + V+ A + Sbjct: 233 IIVPAFSVGRTQELLFDIESLLHHHQLQSTIPIIVDSPMAAKVTKAYRRYRKLWSKEAKQ 292 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLS 313 G P + S E + +L+ Sbjct: 293 KIQQGRQPLNFSQCVVIESHQEHCRVVNRLA 323 >gi|313123698|ref|YP_004033957.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280261|gb|ADQ60980.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 412 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 117/359 (32%), Gaps = 61/359 (16%) Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY---------ERVSKKIPCISF 123 I+H H DH AL+ L +P+YA P LL A P I+ Sbjct: 69 ISHLHLDHSKALNLLSPT--IPLYAGPITAHLLPALNEKGDFLLPAAGHEKGYTRPIIAA 126 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + VG ++E +H L++++P I TGD +L + Sbjct: 127 EYKKPIKVGEITMEIWPSDHDAYGATGLIVKTPDKKISFTGDIRLHGYHPDWVHEFLAA- 185 Query: 184 CAIGNEGILALMCDSTNAMREGTCI-----------SEKGIKKNIYDI-MKNAKGCVLVT 231 ++G + ++T + +E + + + + N K + Sbjct: 186 ----SKGADLFITEATGSSWPERKNEKQSEEFTGINNEDELTQEVVRLQKANPKRQITFN 241 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 T+ ++V R+ II S ++VV A ++ K + P Sbjct: 242 TYPTNVERLLRIISD-------------SPRKVVLHAKRAHLLHKSLGKEFPYYY--LPE 286 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVK--------LAEKDTVIFS-SRAIPGNEVAI 342 E EP + L + + L E I S + + + A Sbjct: 287 EPKF---ADLNPEPEVSYQDLLNDDHEFLWQAVADFDQLMEGGLYIHSNAEPLGDFDPAY 343 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 + V + SGH +L+ + ++P +LV +H LV + Sbjct: 344 KSFVENFAKHNVEY------KALRCSGHADEGELQEIISEVQPAILVPVHTLHPELVEN 396 >gi|76819393|ref|YP_336171.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] gi|76583866|gb|ABA53340.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] Length = 603 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 145 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 195 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 196 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 255 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 256 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 314 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 315 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 366 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 367 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 400 >gi|313676168|ref|YP_004054164.1| RNA-metabolising metallo-beta-lactamase [Marivirga tractuosa DSM 4126] gi|312942866|gb|ADR22056.1| RNA-metabolising metallo-beta-lactamase [Marivirga tractuosa DSM 4126] Length = 456 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 76/473 (16%), Positives = 151/473 (31%), Gaps = 69/473 (14%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N+++ LG G + + L G K +M+DCG+ +L ++ P+ Sbjct: 2 NDKMTINFLGAAGTVTGSKYLLESG----NKKLMVDCGMFQGLKELRLLNWEQPEYD--- 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--- 112 K++ A+ +TH H DH G L L + +Y S + + E AK E Sbjct: 55 --PKSIHAVLLTHGHLDHTGYLARLVKLGFNGKIYGSAPTLKIAEIILKDSAKIQEEEAA 112 Query: 113 RVSKKIPCISFQAGDKVDVGAFS---IESVRVN----HSIPETMALVIRSPVGNIVHTGD 165 R +K+ A D+ V+ H I + + + I T Sbjct: 113 RANKEGYSKHSPAEAFYDLKDVENTLPLFNPVSEGKWHVIDDAFKVRWQYNGHIIGSTFI 172 Query: 166 WKLDDDAILGDVTDKDSLCAI------GNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +D+ L D + E L+ +ST R E+ I + Sbjct: 173 EVETNDSRLVFSGDIGRKKDLLLYTPKKPEKADVLLIESTYGGRIHPE--EESIVPELER 230 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 I+ G + + +F+ V R + ++ + ++ ++ + ++ + Sbjct: 231 IVNETVERGGSLFIPSFA--VERTQLMMLMLWRLLKE-----KKIPKIPMIMDSPMGANV 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 L + + E+ + + Q R + ++ + ++ R + Sbjct: 284 LHLIHASRDWHKLKPEECDEMCSHFQVVSNYRATLALREDNKSKIVIAGSGMMTGGRILN 343 Query: 337 GNEVAIGHIKNRL-----------------------VEQGVRVIAEDAECPVHVSGHPYP 373 E G+ + L V E +S H Sbjct: 344 YMETRSGNSNDTLLFVGYQAEGTRGRKLLEGATEIKVYGKWLPFNMQMEHIEGLSAHGDQ 403 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 NDL I+ P+ + IHGE A ++ + + + + L Sbjct: 404 NDLIDWLSEIKKQPEKVFIIHGEAEQASALQQHIKEVYQWDSEIPQLNQKVEL 456 >gi|126667148|ref|ZP_01738122.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Marinobacter sp. ELB17] gi|126628304|gb|EAZ98927.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Marinobacter sp. ELB17] Length = 454 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 66/451 (14%), Positives = 139/451 (30%), Gaps = 85/451 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITFIM 62 +L F LGG G + + Y + +++DCG+ GV ++ + Sbjct: 1 MKLRF--LGGTGTVTGS----RYLVSDEQHRLLVDCGM------YQGVKILRLRNRARFP 48 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--------------- 106 E ++ A+ +THAH DH G L L H +Y + L + Sbjct: 49 VEPGSIEAVVLTHAHIDHSGYLPALVKNGFHGKIYCTRATHELCKVLLPDAGFLQEEDAR 108 Query: 107 ---AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIESVRVNHSIPETMA 150 K+ + + + A + V F++ H I + Sbjct: 109 YAARKKFSKHANPEPLFTVKDAQQALKHFESLDYHQPFEPVPGFTVNFTPAGH-ILGSAC 167 Query: 151 LVIRSPVGN--IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + I N +V +GD +D I+ L+C+ST R Sbjct: 168 VHIHHENSNRTVVFSGDVGRQNDIIMRPPEPLS--------HADVLVCESTYGDRTHGTS 219 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSL 261 + I G L+ +F+ V R + ++ + ++ + L Sbjct: 220 DPETELAEIISATAARGGLTLIPSFA--VGRAQMLLYVIHKLIAEKRIPDLPVFLNSPMA 277 Query: 262 KRVVSVAIDVGIIK----------KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 + + + + + + ++ + Sbjct: 278 IKATEIFCHFHKEHRLNPAQCQSIDEHTVCVHKVEDSIKLDAVRYPCIIISASGMASGGR 337 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----V 367 + + + +++V+F+ PG + N + + + +H + Sbjct: 338 VLHHL-KTLLPNHRNSVVFAGFQAPG--TRGDSLVNGASDVKIHGEYWPVKAQIHNLTSL 394 Query: 368 SGHPYPNDLKRMYQ---WIRPQVLVAIHGEP 395 S H N++ + Q ++P + HGEP Sbjct: 395 SAHGDYNEILQWLQQDPALKPDKVYVTHGEP 425 >gi|313680726|ref|YP_004058465.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] gi|313153441|gb|ADR37292.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] Length = 447 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 86/267 (32%), Gaps = 49/267 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G G + + L + +++DCG+ + P D + + + + A+ Sbjct: 7 GACGTVTGSCHLLEHQGFK----LLLDCGMYQGE---PRSD----NYDPFGFDPRAVDAV 55 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC---- 120 ++HAH DH G + L+ VYA+ + L+ K + E + + Sbjct: 56 VLSHAHLDHVGRIPRLYRLGFEGRVYATAPTLKLIRPILEDALKLMKEDIKRARRKGLPV 115 Query: 121 -----------------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 VG F I H +P + + +++ +V + Sbjct: 116 PELLWDEADVHALLGRSKPVPYYSPRKVGPFRITLRNAGH-LPGSAFVEVQAGGRTLVFS 174 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + D + ++ +ST R + + + + + Sbjct: 175 GDLG-NRRKETLPDPDYPRVA-------DLVLSESTYGDRPHR-PFQATLVEFAEVLAQT 225 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI 250 G V S ++ R + I+ + Sbjct: 226 LDGGGKVIVPSFALERAQEILFYIRRF 252 >gi|300176709|emb|CBK24374.2| unnamed protein product [Blastocystis hominis] Length = 711 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 65/434 (14%), Positives = 132/434 (30%), Gaps = 92/434 (21%) Query: 31 SRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 K I+ DCGV P GV P + I + + I+H H DH GAL L Sbjct: 4 KGKVILFDCGVL-PD----GVGKGTLPYLDAI--NDDYVDLVLISHFHLDHCGALPVLPR 56 Query: 90 ---FLHVPVYASPFAIGLLEAKRVYE-----------------------RVSKKIPCISF 123 ++ +P ++E+ ++ + I Sbjct: 57 ETGQRRTRIFMTPPTKEIMESILRDYLAITATEDEEDSIYSVSQLEKCIKMMETINFHED 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + + V F + + +++TGD+ ++D L Sbjct: 117 RWHNGIKVKCFQ------AGHVLGAAMFCVEIDRIRVLYTGDFSREEDRHLPA------- 163 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 I + ++C+ST E+ + K + D ++ +G VL+ F+ + R + Sbjct: 164 AEIPPLRLNVVICESTYGRISHESRREREDRLTKEVVDTLRK-RGKVLIPVFA--LGRTQ 220 Query: 242 SIID----------IAEQIGRKIVLLG---SSLK--------------------RVVSVA 268 ++ + G + L S+ V + Sbjct: 221 ELLLLLNEYWEKHPEISRHGNIVYLNPLAKKSMMLFQAHKHTILSRLEENPFDLPNVDIP 280 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE---PRSALAQLSRGEMRNVKLAEK 325 + + +++ + + E R L +++ GE V L Sbjct: 281 DPIDSVSPFFSPHRQFLRDFNKLPPCVILCSPAMMENGTSRDVLERMASGENNLVILTGY 340 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 +R + N+ I +Q + + + S H Q +P Sbjct: 341 CMARTIARRLQDND----RIIPLSGKQMETIDVKCKVVTISFSAHSDFPGTSSFIQATKP 396 Query: 386 QVLVAIHGEPLHLV 399 + +V +HGE + Sbjct: 397 ERVVLVHGEVSRMN 410 >gi|33593589|ref|NP_881233.1| hypothetical protein BP2609 [Bordetella pertussis Tohama I] gi|33572945|emb|CAE42885.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332382995|gb|AEE67842.1| hypothetical protein BPTD_2568 [Bordetella pertussis CS] Length = 452 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 140/448 (31%), Gaps = 82/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G +++DCG+ F +L + + Sbjct: 2 LTLTCLGGAGTVTGSKHLLRHG----DTRLLVDCGL-FQGLK----NLRELNWQPLPVAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------AKRVYERV 114 ++ A+ +THAH DH G L L + ++A+P + E K Sbjct: 53 ADIDAVVLTHAHLDHCGYLPRLVAEGFRGRIHATPATRDVAELILLDSANLQEKDAEFAN 112 Query: 115 SKKIPCISFQAGDKVDV---------------------GAFSIESVRVNHSIPETMALVI 153 K + V G ++ R H I I Sbjct: 113 RKGFSRHTPALPLYRVVDAERALARFSGVALHRETALPGGATLTLRRAGH-ILGAATAQI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD +D ++ D D ++ +ST R Sbjct: 172 DIGGMRVVFSGDLGRYNDPVMHDPEDV--------RNADYIVIESTYGNRRHDAADPVEA 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLL--------- 257 + + G V++ F+ V R +++I + + L Sbjct: 224 LGAVIERTVLRGGTVVIPAFA--VGRAQTLIHALWKLRQAGRLHNVPVYLDSPMATSATE 281 Query: 258 --GSSLKRVVSVAIDVGIIKKDQLFLSDESFGL-YPREQL--IVIATGSQGEPRSALAQL 312 A D ++ D P + ++++ L + Sbjct: 282 LLARHASEHKLSAQDCAAACAAVTYVRDVEGSKALPANRYPKVILSASGMATGGRVLHHM 341 Query: 313 --SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + RN L F + G ++ G + R+ Q + + AE AE P+ +S H Sbjct: 342 AAFGADHRNTVLFAG----FQAAGTRGRKLLDGATETRIYGQWIPIKAEVAELPM-LSAH 396 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPL 396 ++L R + P+ + +HGEP Sbjct: 397 ADSDELMRWLAGFQEAPRRVFIVHGEPQ 424 >gi|116670593|ref|YP_831526.1| beta-lactamase domain-containing protein [Arthrobacter sp. FB24] gi|116610702|gb|ABK03426.1| beta-lactamase domain protein [Arthrobacter sp. FB24] Length = 461 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 131/443 (29%), Gaps = 72/443 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F LG + + L ++ K I++DCG+ F + P Sbjct: 8 QLRF--LGATDSVTGSRYLVE----AAGKRILVDCGL-FQGYKVLRDRNRIPFP----VR 56 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKK 117 ++ AI +THAH DH G + L + PVYA+ L E Sbjct: 57 PDSIDAILLTHAHLDHTGYVPALVRDGFNGPVYATEGTTELCTLLLPDSGHLQEEEAKYA 116 Query: 118 IPCISFQAGDKVDV-------------------------GAFSIESVRVNHSIPETMALV 152 S + V + G + + H I + Sbjct: 117 YEHGSSRHSPPVPLYTAADAVRSLDSFREHGFDTPLELGGGIAATFLPAGH-ILGAAQIR 175 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC-ISEK 211 + ++ TGD D G L+ +ST R+ + E Sbjct: 176 LAVGQHSVHFTGDLG--------RTDDPLMFPPRGLGAADILVTESTYGNRKHSSLDPEL 227 Query: 212 GIKKNIYDIMKNAKGCVLVT--------TFSSSVSRI---RSIIDIAEQIGRKIVLLGSS 260 + + I + K G +++ T +SR+ +I DI + + + S Sbjct: 228 QLGEIITRVAKK-NGVIMIAAFAVGRAETLMLHLSRLRSKNAIPDIPVYLNSPMAIDASG 286 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRN 319 + + + + + ++ + +L+ + G ++ + R Sbjct: 287 MYQRHPDEHRLKQPEYEDMYKVAKMTRTVDDSKLLNLRGGPMVIISASGMLTGGRILHHI 346 Query: 320 VKLAEKDT-VIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + I S G ++ + I + +S H + Sbjct: 347 AEYGPDPKNAIILSGYQAGGTRGAALAAGVRQLRIYGEDVRIRAEVIQMESLSAHADSDG 406 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 L + P++ HGEP Sbjct: 407 LIEWMRAAAREPRMTYITHGEPE 429 >gi|307566290|ref|ZP_07628732.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] gi|307344984|gb|EFN90379.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] Length = 267 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N L S +MIDCGV + P Sbjct: 2 LNFISFG-SGSSG-NCYLL----YSETDCLMIDCGVGMRLLKKYFQNYNLP--------I 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K + I +TH H DH A+ + L++PVYA+ + R + + Sbjct: 48 KMIKHIILTHDHADHVKAVGSISKDLNIPVYATELVHQGIRKNLAVHRKIDSKLVVEIEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 +++++G FS+ V H + + I + V D Sbjct: 108 QERIEIGEFSVTPFSVPHDSTDCVGYCIEHEGISFVLVTDCG 149 >gi|47213099|emb|CAF89519.1| unnamed protein product [Tetraodon nigroviridis] Length = 810 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 5 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 58 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE 112 + + I+H H DH GAL + + + Sbjct: 59 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 107 >gi|189461404|ref|ZP_03010189.1| hypothetical protein BACCOP_02059 [Bacteroides coprocola DSM 17136] gi|189431933|gb|EDV00918.1| hypothetical protein BACCOP_02059 [Bacteroides coprocola DSM 17136] Length = 269 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 64/193 (33%), Gaps = 16/193 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ FL LG G G N + I+ID G+ + +F D Sbjct: 1 MEVRFLSLG-SGSSG-NCYYLATKTCG----ILIDAGIGIRS-----IKKIFKDYAL--- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + A+ ITH H DH A+ L +P+Y++P + Sbjct: 47 NLDTIRAVLITHDHADHIKAVGHLAKKHSIPIYSTPEVHAGINRSYCMTEKLDNAHRRFI 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVTDKD 181 + + + FSI V H + + I D D A + ++ Sbjct: 107 NKEETIQIEDFSITCFEVPHDATDNVGYCISVGDKTFSFITDIGHITDTAAAYIERSNYL 166 Query: 182 SLCAIGNEGILAL 194 L A +E +L + Sbjct: 167 ILEANYDETMLQM 179 >gi|172059029|ref|YP_001815489.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171991550|gb|ACB62472.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 263 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 13/169 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ + I + + + +F+TH H DH + + Sbjct: 19 IESEQTRLLVDAGLT--------GKAMLALFDQIHRSPEKIDGLFVTHEHSDHIKGVGIM 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +EAK ++ G+ G +ES V+H + Sbjct: 71 ARKYNIPLYANEKTWAAMEAKI---GKIDPALKFLWEVGEVKQFGDIEVESFNVSHDAAD 127 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 M + H D + D + D A + G+L + Sbjct: 128 PMFFQFAHEGKRLAHITDTGYVSDRMKGVIRGADAYIFEANHDIGMLQM 176 >gi|254176126|ref|ZP_04882784.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] gi|160697168|gb|EDP87138.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] Length = 525 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 67 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 117 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 118 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 177 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 178 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 236 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 237 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 288 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 289 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 322 >gi|297279172|ref|XP_001092173.2| PREDICTED: integrator complex subunit 11 isoform 3 [Macaca mulatta] Length = 579 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 123/417 (29%), Gaps = 72/417 (17%) Query: 55 FPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR 109 FPD ++I + L + I+H H DH GAL P+Y + + Sbjct: 24 FPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILL 83 Query: 110 VYER-----VSKKIPCISFQAGDKVDVGAFSIESVRV-------------NHSIPETMAL 151 R + + Q ++ + + Sbjct: 84 EDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMF 143 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCIS 209 I+ ++V+TGD+ + D LG I L+ +ST A R+ Sbjct: 144 QIKVGSESVVYTGDYNMTPDRHLGA-------AWIDKCRPNLLITESTYATTIRDSKRCR 196 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII------DIAEQIGRKIVLLGSSLKR 263 E+ K +++ ++ G VL+ F+ + R + + + I ++ Sbjct: 197 ERDFLKKVHETVERG-GKVLIPVFA--LGRAQELCILLETFWERMNLKVPIYFSTGLTEK 253 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 ++ + ++ + + P + V Sbjct: 254 ANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMV----------VFAT 303 Query: 324 EKDTVIFSS----RAIPGNEVAIGHI----------------KNRLVEQGVRVIAEDAE- 362 S R GNE + + + +L +G +V+ + Sbjct: 304 PGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQV 363 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + S H + ++ P+ ++ +HGE + K+ QE NG Sbjct: 364 EYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANG 420 >gi|49477329|ref|YP_035906.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328885|gb|AAT59531.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 436 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 138/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 24 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 69 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 70 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 129 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 130 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 189 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I I + D+ + + + +I + A + Sbjct: 190 SNIL------RANLPEILRGDIKVAIVDAAY--HTDDVSQHERVNELCTEIERAAGNKGI 241 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 242 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFVYKDWIKNNKELEELMESL 301 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 302 KRNVIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 355 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 356 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 408 EDTDRLQKKLSTAGYENVYSLTMERI 433 >gi|229166650|ref|ZP_04294402.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH621] gi|228616904|gb|EEK73977.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH621] Length = 417 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 139/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A Sbjct: 51 AVFLSHIHEDHTMGLPLLTKYGYKKKIWTTRYTKEQLPAYFEKWGNYNLSKGWNLPYNDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 NVKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + +L I + D+ ++ + + +I + A+ Sbjct: 171 SNILR------ANLPEDLRSDIKMAIVDAAY--HTDDVSQKERVDELCAEIERVAQNKGT 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 S+ R + I+ + G + + + + V + Sbjct: 223 ALLPLPSLGRAQDIVFYLYERYKELPIIVDKEILAGFEEMFIYKDWLKNKEKLERVVEVL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ E++++IF+ Sbjct: 283 KRNIIVMDNDICMQNSYGIVVMSDANMQTKRAQLY------YEQLRYEERNSIIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V H +D+K M + P+ V +H Sbjct: 337 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSISDVKEMLNTLLPEHTVLVHALK 388 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 389 EDTDRLQQKLSTAGYENVYSLTMERI 414 >gi|254202926|ref|ZP_04909288.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|254208260|ref|ZP_04914609.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|254359427|ref|ZP_04975699.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] gi|147745971|gb|EDK53049.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|147750947|gb|EDK58015.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|148028614|gb|EDK86574.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] Length = 537 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 79 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 129 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 130 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 189 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 190 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 248 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 249 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 300 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 301 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 334 >gi|124485834|ref|YP_001030450.1| ADP-ribosylation/crystallin J1 [Methanocorpusculum labreanum Z] gi|124363375|gb|ABN07183.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 636 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 79/479 (16%), Positives = 148/479 (30%), Gaps = 80/479 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDDLPGVDLVFPD 57 ++ L LG ++G L + ++IDCG V ++P Sbjct: 180 DQWLRLTTLGCCRQVGRAAFLL----STPESKVLIDCGESPGATGAASSPYLNVPEIYPF 235 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAK 108 NL A+ +THAH DH + L+ + PVY +P L L+ Sbjct: 236 T--------NLDAVVLTHAHLDHSAFIPLLYRYGYDGPVYTTPATRDLATMLQLDYLDVN 287 Query: 109 RVYERVSKKI---------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV-- 157 +R I+ GD D+ ++ I + Sbjct: 288 NKEDRAPPYSSNEIREFVKHTIALGYGDVTDIAPDMKLTLHNAGHILGSAIAHFNVGNGV 347 Query: 158 GNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 N+ TGD + V+ L + L+ +ST + S ++ Sbjct: 348 YNVAFTGDLFYGKSRLFNPAVSQFPRLES--------LVIESTYGGSDDFSPSRVEAEER 399 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRSI---IDIAEQIGRKIVLLGSSLKRVVSVAID 270 +Y+++ G VL+ F+ V R + + I+ + R L ++ A Sbjct: 400 LYEVINETLGRGGKVLIPAFA--VGRSQELMLAIEEGMRNNRIPKCKVY-LDGMIKEATA 456 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV------KLAE 324 + + L + + Q + Q+ E V + Sbjct: 457 MHTAYPEYLNTDLRNLIFRDNYNPFLADCFEQVDSYDKRQQVIFSEDPCVIISTSGMMNG 516 Query: 325 KDTVIFSSR--AIPGN---------EVAIGHIKNR------LVEQGVRVIAEDAECPVHV 367 + + S P N E G + + ++G VI + + Sbjct: 517 GPVIEYLSNLAESPKNMIVFVGYQAEGTYGRRIQKGWREVPIGKRGTIVINMEIQTVEGF 576 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 SGH L Q++ +P+ + IHGE + ++ +N + R+ Sbjct: 577 SGHADRKQLMNYVQYVQPKPERVFTIHGEESKTIDFASSIYKKFHIQTVAPQNLETYRM 635 >gi|86606689|ref|YP_475452.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] gi|86555231|gb|ABD00189.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] Length = 588 Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 63/467 (13%), Positives = 125/467 (26%), Gaps = 74/467 (15%) Query: 1 MKNEE--LVFLPLG------GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD 52 M++E L PLG G Y +++DCG+ P L Sbjct: 1 MESERPPLRLFPLGTDPRRQGC----------AYWLEMGSHRLLLDCGL--PASSLFKAL 48 Query: 53 LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVY 111 PD A+ +HAH DH L + VP+YA+P L Sbjct: 49 PGIPD------------AVICSHAHFDHLQGLPAFYRRYPQVPIYATPLTAHLAGGLWER 96 Query: 112 ERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I F + G + H +P A ++++ T Sbjct: 97 GVWPGYDREIRFPPFRALPFGQAREILPHLMLTFFTAGH-LPGAAATLLQNTQTTPAQTC 155 Query: 165 DWKLDDDAILGDVT---DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 + D D +L +L + + E + + + + Sbjct: 156 VYTGDCSLASTRFAPGLDLTAL-RHWQPDVLLIEASLGSTRHPPRRHLENRLVERLLGAL 214 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA-----------ID 270 + + + + +I + + R S + V VA Sbjct: 215 AAGQTVLF---PLPVLGLGQELIFLLKAHHRFTQA---SQELTVWVAPGLAAGCNLYERL 268 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + + + + + ++ +P L + + Sbjct: 269 LPYLPEPVRNFATYQPLFWEDRLQPRVQPLTEADPLPQGLLLCDAD-----AGPEAWDPI 323 Query: 331 SSRAIPGNEVAI-------GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 SR + + + + + + + + H L ++ Sbjct: 324 WSRLLAQPQRSCLLVRLPEVELATPFDQWPAPLRSRIGVEWLAWHSHNDVGHLTQIVHTF 383 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 RPQ +V +H P +L V + G L L ++ Sbjct: 384 RPQHVVLVHASPQQAQDLADLPELCNRYHVHCPQPGHWLELPDGRLQ 430 >gi|299538512|ref|ZP_07051795.1| zinc-dependent hydrolase [Lysinibacillus fusiformis ZC1] gi|298726099|gb|EFI66691.1| zinc-dependent hydrolase [Lysinibacillus fusiformis ZC1] Length = 373 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 82/226 (36%), Gaps = 27/226 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGGVGE G N + R+ I++DCG+ P P+ITF Sbjct: 2 LSVEILGGVGEYGRNCFYIE----NQRQAILLDCGIMKNTQKTP------PNITF--NHI 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + L+A+FI+H+H DH GAL L + P+ S L + + Sbjct: 50 EKLVAVFISHSHIDHVGALPILQNMGYSGPILMSHTTAQQLPLL-----IPQGRTFYPDT 104 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G ++V + + + ++ IR I +GD+ +D + +L Sbjct: 105 IGKWIEVNEYLAFQWGYSGHLIGSVWYKIRFFDEMIFFSGDYVVDSYLLK------ATLP 158 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 DS +A + + + + + +K + Sbjct: 159 EEDGTVYDVAFIDSGHAEKCIRNL---EVLEQMAMYVKAHPNHSFI 201 >gi|254185960|ref|ZP_04892478.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254194047|ref|ZP_04900479.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] gi|254301019|ref|ZP_04968463.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|157811085|gb|EDO88255.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|157933646|gb|EDO89316.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|169650798|gb|EDS83491.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] Length = 525 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 67 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 117 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 118 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 177 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 178 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 236 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 237 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 288 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 289 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 322 >gi|121598051|ref|YP_990936.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126445222|ref|YP_001063734.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] gi|126447010|ref|YP_001077401.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|217422620|ref|ZP_03454123.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] gi|237508234|ref|ZP_04520949.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|238562394|ref|ZP_00440490.2| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] gi|254184742|ref|ZP_04891331.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|121225849|gb|ABM49380.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126224713|gb|ABN88218.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] gi|126239864|gb|ABO02976.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|184215334|gb|EDU12315.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|217394851|gb|EEC34870.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] gi|235000439|gb|EEP49863.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|238522692|gb|EEP86135.1| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] Length = 472 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 14 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 64 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 65 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 124 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 125 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 183 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 184 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 235 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 236 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 269 >gi|218235177|ref|YP_002366474.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218163134|gb|ACK63126.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 419 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 53/445 (11%), Positives = 131/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 7 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REAVPFLDA 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 54 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNLPYSDQH 113 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ D Sbjct: 114 IKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSADS 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + ++ G + A + + + +I + + + Sbjct: 174 NILRANLP--------EKLGYNIKIAIVDAAYHTEDVSQNERVNELCAEIERVMQNKGIA 225 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 226 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEEFKWIMESLK 285 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 286 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 339 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V + V H D+K M + P+ V +H Sbjct: 340 GSF--------AEKVMKEHVRSTCRVKRVVYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 391 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 DTDRLQQKLSTAGYENVYSLAMERI 416 >gi|56965023|ref|YP_176754.1| zinc-dependent hydrolase [Bacillus clausii KSM-K16] gi|56911266|dbj|BAD65793.1| beta-lactamase superfamily Zn-dependent hydrolase [Bacillus clausii KSM-K16] Length = 367 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 88/240 (36%), Gaps = 37/240 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGGVGE G N L ++ + I++DCGV K + FP IT + Sbjct: 2 VKVTALGGVGEYGRNCFLL--KEEATNQTILLDCGVKNGKPEQ------FPAIT--EQLA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +F++H H DH GAL L + ++ S ++ +E + R + S Sbjct: 52 STIDVVFLSHVHNDHVGALPLLAAKGFTKEIWLSEASLAQIEPIKSVWRKKADVSPYSSS 111 Query: 125 AGDKVDVGAF---------------SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 DK+ +F S H + ++ V++ I +GD L Sbjct: 112 DVDKLRFQSFPSNSRGKWTKLSDHLSFTWGYSGH-MLGSVWYVLQVGKHIIFFSGDMSL- 169 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 VTD G + D+ ++ EK ++ + + A+ + Sbjct: 170 --ESPLLVTDYPK-----KIGYDVALLDTGHSGIT--MPREKSMEAILASVHDPARRYTI 220 >gi|260591526|ref|ZP_05856984.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] gi|260536557|gb|EEX19174.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] Length = 416 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 71/426 (16%), Positives = 135/426 (31%), Gaps = 31/426 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLMA 70 G +IG + +++ I+ID G + P + V+ V + + A Sbjct: 9 GANQIGGCITEI----ATTKAKIIIDLGSNLPGNRIKELTVEQV-------TQITADADA 57 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK---RVYERVSKK-----IPCIS 122 IF TH H DH G L L +P Y A+ +++ K +K+ + Sbjct: 58 IFYTHYHGDHIG-LFHLVPN-DIPQYVGKGALEVIKCKYDTLSKHIDTKEEQNTINHMRT 115 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + A + + + I +HS + I S I+HTGD++ G D Sbjct: 116 YFANEPIQIKDIRITPYFCSHSAFDAYMFKIESEGKVILHTGDFRNHGYLGKG----LDR 171 Query: 183 LCAIGNEGILALMCDSTNAMREGTCI-SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + I L+ + T R + E I N ++K K V S+ + R+ Sbjct: 172 ILKYYIRQIDLLITEGTMLGRTQEKVLHEMDILSNTIKVLKRHK-YVFALCSSTDLERLA 230 Query: 242 SIIDIAEQIGRKIVL-LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 S + + R S + I + + ++ Sbjct: 231 SFKEACKLTHRVFCCDHFLSSILDIFTKYTKSSIFNFSNKFLLNQYNEPKVREFLMKRGF 290 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 S + ++ + G E + + E I + Sbjct: 291 LIPVRSSQIERIKKLINTYNDAPPYLIYSMWQGYHNGQEEHLNPQIIAMRELFNGRIYDG 350 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 H SGH L+ + P ++ IH + + L + + +R+ Sbjct: 351 TRDGFHTSGHADLKTLRDVCIRTNPHTGIIFIHKDFSSSIEALHLPTRIHLIRANTIRDN 410 Query: 420 KMLRLF 425 +R++ Sbjct: 411 FAIRIY 416 >gi|222095417|ref|YP_002529477.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|221239475|gb|ACM12185.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] Length = 419 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 64/446 (14%), Positives = 140/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ KD P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYKDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---KRVYERVSKKIP------ 119 A+F++H HEDH L L + ++ + + L A K +++ Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWHVPYTDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + V + + + + ++ + ++GD+ + Sbjct: 113 NVKDLNYVYIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L + I + D+ + I + +I + A + Sbjct: 173 SNIL------RANLPEKLHGDIKVAIVDAAY--HTDDVSQHERINELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 225 TLLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFQQMFAYKDWIKNNEELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L V+ E++++IF+ Sbjct: 285 KRNIIVMDDDSGTQHSYGIVVMSDANMQTKRAQLY------YEQVRHDERNSIIFTGHIA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSIRDVKEMLNTLSPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|206895786|ref|YP_002246519.1| RNA-metabolising metallo-beta-lactamase [Coprothermobacter proteolyticus DSM 5265] gi|206738403|gb|ACI17481.1| RNA-metabolising metallo-beta-lactamase [Coprothermobacter proteolyticus DSM 5265] Length = 504 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 81/480 (16%), Positives = 140/480 (29%), Gaps = 91/480 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--I 61 EL F LG E+ + L S ++ID G+ K++ D + + Sbjct: 1 MELTF--LGAAQEVTGSSYLLE----SDNAKLLIDFGMFQGKEE---------DWNYQPL 45 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------AKRVY 111 + K + A+ +THAH DH G + L P++A+P I L + K Sbjct: 46 DIKAKEVNALLLTHAHLDHSGRIPVLVKNGFRGPIFATPPTIELTKLLWEDTVKLMKEEK 105 Query: 112 ERVSKKIP----------------------CISFQAGDKVDVGAFSIESVRVNHSIPETM 149 ER+ +K + F H I Sbjct: 106 ERLDRKRRRQDKPPVELLFDEDDINEASKLFVPLPWNQTERFKEFQFTFRPSGH-ILGAS 164 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 ++ + + +V +GD D + E ++ +ST R+ I Sbjct: 165 SIEVNAENIKLVFSGDLGPQDTVLEPPP--------YIFEYADYVVIESTYGDRQHKDIR 216 Query: 210 EKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ------------------- 249 E + KN + VL+ TF V R + II Sbjct: 217 ETRAEFKNALSAAIRDRSKVLIPTFV--VDRAQRIIYELYLLLTQEMPELATMPMFFDSP 274 Query: 250 IGRKIVLLGSSLKRVV-------SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +G KI + SS + +D + + ++S L + +++A Sbjct: 275 LGNKITAVYSSYPEYLLPHLAEFFQGMDQEKLGIQYIDTPEQSKKLNNLDHALIMAGSGM 334 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 L L + + A + +N + + Sbjct: 335 CTGGRILHHL---KHGLWNPKNHLIFVGYQAAGTLGRSIVDGARNVKIMGEDIAVRAQIH 391 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQ-VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 S H DL + +P + HGEP + G V P R + Sbjct: 392 TINGFSSHADAKDLLSWAKNFQPDTTFLITHGEPRPAKSLAVSLGNMGYHSVIPARRQSV 451 >gi|126455589|ref|YP_001076629.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|134278122|ref|ZP_01764836.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|226195817|ref|ZP_03791404.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|242313182|ref|ZP_04812199.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|254263361|ref|ZP_04954226.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] gi|126229357|gb|ABN92770.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|134249906|gb|EBA49986.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|225932302|gb|EEH28302.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|242136421|gb|EES22824.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|254214363|gb|EET03748.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] Length = 472 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 14 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 64 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 65 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 124 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 125 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 183 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 184 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 235 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 236 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 269 >gi|325568430|ref|ZP_08144797.1| hypothetical protein HMPREF9087_1086 [Enterococcus casseliflavus ATCC 12755] gi|325158199|gb|EGC70352.1| hypothetical protein HMPREF9087_1086 [Enterococcus casseliflavus ATCC 12755] Length = 430 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 122/340 (35%), Gaps = 37/340 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L ++P+Y +LE +E S Sbjct: 87 AVFLSHAHLDHSKMINFL--DPNIPMYTLKETKAILEVLNQKGDFLLPVPHEEKSFVREL 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + +G +E + V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLEPHDVIRIGEIEVEIIPVDHDAYGAAALLIRTPDHFIAYTGDLRL-HGYHPERTKEF 203 Query: 181 DSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSS 235 L + EG+ + + T SE + + + +N + + + + Sbjct: 204 CQLAKHTDLLMMEGVSISFPEREPDPKAITVESETELIETFVRLVKENPQRQITFNGYPA 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V R ++++ A + V+ + + + + L Sbjct: 264 NVERFMALVEAAPRT------------VVLEATQAALLKEIFNKDVPFYTIDDQVPATLD 311 Query: 296 VIATGSQGEPRSALAQLSRGEMRNV-KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQG 353 S + +Q + + L I S ++ + + A ++L Sbjct: 312 PAFAISYQALCADTSQYLWQAVAHFENLQTGGLYIHSDAQPLGDFDPAYQVFLDQLAALE 371 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + + SGH P DL ++ WI PQ LV IH Sbjct: 372 IEFV------RLPNSGHAKPADLDQIIAWIEPQRLVPIHT 405 >gi|53716541|ref|YP_105000.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] gi|167724835|ref|ZP_02408071.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei DM98] gi|167899398|ref|ZP_02486799.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 7894] gi|167907728|ref|ZP_02494933.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei NCTC 13177] gi|167923912|ref|ZP_02511003.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei BCC215] gi|52422511|gb|AAU46081.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] Length = 459 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 171 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 223 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 256 >gi|315641301|ref|ZP_07896378.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] gi|315483068|gb|EFU73587.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] Length = 430 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 123/346 (35%), Gaps = 42/346 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 A+F++H H DH ++ L +P+Y + +L E + P Sbjct: 87 AVFLSHVHLDHSKMINYL--DPAIPLYTLKESKDILTFLNREGEFLLPSPFEETNYTRPM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + G + VG +E V V+H AL+I +P I +TGD +L + D Sbjct: 145 IGLEKGAMIQVGEIQVEVVPVDHDAYGASALLIHTPDSFITYTGDLRL----HGHNSEDT 200 Query: 181 DSLCAIGN-------EGILALMCDSTNAMREGTCISEKGIKKNIYDIM-KNAKGCVLVTT 232 C EG+ + ++ +SE+ + + + ++ N + Sbjct: 201 KRFCEKAKHTDILMMEGVSISFPERPTDPKQIKIMSEEDLVQQMVRLVDANQNRQITFNG 260 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA--IDVGIIKKDQLFLSDESFGLYP 290 + ++V R I+D R +VL ++ V ++ L Sbjct: 261 YPANVLRFEKIVD---ASPRTVVLEAKMAALILEVLGKQVAYYYLPHDKEITHLDKKLEI 317 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 ++ R+ Q + + + + + S A P E N + Sbjct: 318 SYEV----------LRNDQRQYLWQVVDHFEELLPNGLYIHSDAQPLGEFDP----NYRI 363 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 + + + SGH +P+DLK++ WI P+ LV IH Sbjct: 364 FLDLLSSHQIEFVRLACSGHAFPDDLKQIIAWIEPKCLVPIHTLHP 409 >gi|91787107|ref|YP_548059.1| beta-lactamase-like protein [Polaromonas sp. JS666] gi|91696332|gb|ABE43161.1| beta-lactamase-like protein [Polaromonas sp. JS666] Length = 453 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 52/270 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L + + +++DCG+ F + + + + + A Sbjct: 6 LGATDTVTGSKYLVQH----DKARVLVDCGL-FQGYKQL----RLRNWSPLPVKPAAIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK------------- 116 + +THAH DH G L L VY +P L + Sbjct: 57 VVLTHAHIDHSGYLPLLARQGFRGKVYCTPATADLCRILLPDSGHLQEEEAEYANRRGLS 116 Query: 117 ------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 K+ + H +P + + + + Sbjct: 117 KHSPALPLYTREDAERCLKLLHPVDYGKHWQPAPGLNASLTPSGH-MPGSSFVRLDNGSR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 +++ +GD D +G L+ +ST R + + Sbjct: 176 SLLFSGDIG--------RPNDLVLKAPSQMDGADYLVVESTYGDRLHKYSDPLTVLGEVI 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + G V++ F+ V R +S++ Sbjct: 228 NRTAARGGVVVIPAFA--VGRAQSLMYCIH 255 >gi|53722936|ref|YP_111921.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei K96243] gi|167743774|ref|ZP_02416548.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 14] gi|167820965|ref|ZP_02452645.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 91] gi|167829317|ref|ZP_02460788.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 9] gi|167916071|ref|ZP_02503162.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 112] gi|52213350|emb|CAH39393.1| putative metallo-beta-lactamase family protein [Burkholderia pseudomallei K96243] Length = 459 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPIYCTHGTAALCEIMLIDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 171 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 223 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 256 >gi|326939403|gb|AEA15299.1| zinc-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 419 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 55/445 (12%), Positives = 132/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 7 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REAVPFLDA 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 54 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWDLPYNDQH 113 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + V + + + + ++ + ++GD+ + Sbjct: 114 IKDLNYVCIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMYNTYVFYSGDYSAES 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + + +I + + + Sbjct: 174 NIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERVNELCAEIERVMQNKGIA 225 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + V K Sbjct: 226 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFAYKDWIKNNKELKWVMKSLK 285 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 286 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 339 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V + V H D+K M + P+ V +H Sbjct: 340 GSF--------AERVMKEPVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 391 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 DTDRLQQKLSTAGYENVYSLAMERI 416 >gi|259501458|ref|ZP_05744360.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus iners DSM 13335] gi|302191573|ref|ZP_07267827.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus iners AB-1] gi|325911787|ref|ZP_08174191.1| hypothetical protein HMPREF0522_0401 [Lactobacillus iners UPII 143-D] gi|259167126|gb|EEW51621.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus iners DSM 13335] gi|325476293|gb|EGC79455.1| hypothetical protein HMPREF0522_0401 [Lactobacillus iners UPII 143-D] Length = 429 Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 85/427 (19%), Positives = 147/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P I +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKIAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 ++ K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VQYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVNYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPNVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|147921737|ref|YP_684443.1| metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110619839|emb|CAJ35117.1| predicted metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 516 Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 78/494 (15%), Positives = 147/494 (29%), Gaps = 119/494 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-----------KDDLPGV-DLV----FP 56 G IG N G + +D G+++ D G+ DL+ P Sbjct: 9 GAETIGGNKIYVENGGSG----VFLDFGMNYSRYNEYFNEYLCDRDTRGIHDLLQLNLIP 64 Query: 57 DITFIMKE--------------RKNLMAIFITHAHEDHYG-------ALHDLWS------ 89 + + R ++ A+ ++HAH DH G A+ + S Sbjct: 65 KLNIYRDDLLTSDTCGCVRSYARPDVKAVLLSHAHMDHTGNMGLLDHAIPFVASSLSLAI 124 Query: 90 --------------------FLHVP--------------------VYA-SPFAIGLLEAK 108 VP +Y + A L + Sbjct: 125 LKAQQDVSRNAGTSAEAAYVKPRVPGDNPLVCGSAGTKTPSVGRDLYGLTEPAARLHDLM 184 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 SK ++D+ F +++ ++HSI +A ++SP G I +TGD++ Sbjct: 185 AANPLKSKPYRPGHIGHLSELDL-PFEVDAYPMDHSICGAVAYRLKSPDGTIFYTGDFRF 243 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TCISEKGIKKNIYDIMKNAKGC 227 D L A G L+ + T REG +E + ++ + + Sbjct: 244 -HGENGSQNMD--RLVA-GAREANVLIVEGTRTGREGDHPTTESDVYEHCKAAVDSTDKL 299 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 V+ + + R+ IA + GR++V+ + + ++ G + L + D Sbjct: 300 VIADFSARNFERLEMFARIARETGRELVITTRDVYLLAALECADGRCRMSNLLVYDAISD 359 Query: 288 LYPREQLIVIATGSQGEPRS------------ALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 ++ S + I+SS Sbjct: 360 SKSGCDQRLVEREYADRLLSPMEISRNPGNYILCFSFYDMKHLLDIKPNDGLYIYSSSEA 419 Query: 336 PGNEVAIG--HIKNRLVEQGVRV-----------IAEDAECPVHVSGHPYPNDLKRMYQW 382 E I + L + E H SGH ++L++ Sbjct: 420 FSEEQEIDHLKLFRWLRHFNIETRGIRLATENGRPEITTEPGYHASGHIAGDELEKFIDR 479 Query: 383 IRPQVLVAIHGEPL 396 I P +++ +H Sbjct: 480 ISPDIIIPVHTTAH 493 >gi|257867086|ref|ZP_05646739.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257873421|ref|ZP_05653074.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257877166|ref|ZP_05656819.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257801142|gb|EEV30072.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257807585|gb|EEV36407.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257811332|gb|EEV40152.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 430 Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 122/340 (35%), Gaps = 37/340 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L ++P+Y +LE +E S Sbjct: 87 AVFLSHAHLDHSKMINFL--DPNIPMYTLKETKAILEVLNQKGDFLLPVPHEEKSFVREL 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + D + VG +E + V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLEPHDVIRVGEIEVEIIPVDHDAYGAAALLIRTPDHFIAYTGDLRL-HGYHPERTKEF 203 Query: 181 DSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSS 235 L + EG+ + + T SE + + + +N + + + + Sbjct: 204 CQLAKHTDLLMMEGVSISFPEREPDPKAITVESETELIETFVRLVKENPQRQITFNGYPA 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +V R ++++ A + V+ + + + + L Sbjct: 264 NVERFMALVEAAPRT------------VVLEATQAALLKEIFNKDVPFYTIDDQVPATLD 311 Query: 296 VIATGSQGEPRSALAQLSRGEMRNV-KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQG 353 S + +Q + + L I S ++ + + A ++L Sbjct: 312 PAFAISYQALCADTSQYLWQAVAHFENLQTGGLYIHSDAQPLGDFDPAYQVFLDQLAALE 371 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + + SGH P DL ++ WI PQ LV IH Sbjct: 372 IEFV------RLPNSGHAKPADLDQIIAWIEPQRLVPIHT 405 >gi|217966881|ref|YP_002352387.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] gi|217335980|gb|ACK41773.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] Length = 515 Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 77/474 (16%), Positives = 148/474 (31%), Gaps = 97/474 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G GE+ + L + ++DCG+ + + + D T Sbjct: 1 MRITFYGAAGEVTGSCYLLE-----NNFKYLVDCGIFQGRSEKENENPFLFDPT------ 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---------KRVYERVS 115 + A+ +THAH DH G + L +YA+ I L E K ER++ Sbjct: 50 -EIKAVILTHAHLDHSGRIPKLVKEGFKGRIYATYPTIELCEILWLDTVKLMKEETERIN 108 Query: 116 KKI----------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 +K + VD+ I H I +L + Sbjct: 109 RKNLRSGKPLVEPLYTEKEVEMAMKLFEPVPYDEMVDLSDIKIRFRDSAH-ILGASSLEL 167 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 S IV +GD ++ + G + E ++ +ST R + E Sbjct: 168 WSNDTKIVFSGDIGPQNNVMEGRPS--------IIEDADYVVIESTYGDRLHKTLEETRA 219 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS------------ 259 +K + D + N++G +L+ +F V R + ++ + K Sbjct: 220 EFEKVVLDAI-NSQGKILIPSFV--VDRAQRVMYELMLLSYKYPFFSKIPIFFDSPMGKK 276 Query: 260 --------------SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG----S 301 +++ I+ +K + + + +I G + Sbjct: 277 VTAVYEKHSNLLSGEIQKYFLEGINPFELKNLRYLTTPDESKSINELDTGIIIAGSGMCT 336 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 G L E +V R I E + H+ + ++ + Sbjct: 337 GGRILHHLKHNLWKENTHVIFVGYQAQGTLGRRIVDGEKVV-HVMGEEITVRAKIHTING 395 Query: 362 ECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACV 413 S H DL + ++ + P + + +HGEP A +L +G + Sbjct: 396 -----FSAHADQKDLIKWTEYFKNDP-IFLIVHGEPQASQALSQLLQLKGRKTI 443 >gi|194042051|ref|XP_001926894.1| PREDICTED: DNA cross-link repair 1A protein [Sus scrofa] Length = 1058 Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 112/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL++K ++ + Sbjct: 745 AYFLTHFHSDHYAG---LSKNFTFPVYCSEVTGNLLKSKL----HVQEQYIHPLPIDTEC 797 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + Sbjct: 798 VVNGVKVVLLDANH-CPGAVMVLFHLPNGHVILHTGDFRADPTMER---------SLLAG 847 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E + S++ + + + A LV + S+ + + + Sbjct: 848 QKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLA 907 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + + S Sbjct: 908 IADVLGSKV---GMSKEKYNTL-----------RCLNIPEINSFITTDMC----NSLVHL 949 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + + + Sbjct: 950 LPMMQINFKGLQNHLKKFGGKYNQILAFRPTGW--THSNKLTSIADVLPQTKGNISIYGI 1007 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++P++++ Sbjct: 1008 PYSEHSSYPEMKRFVQWLKPRIIIPT 1033 >gi|323139242|ref|ZP_08074297.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. ATCC 49242] gi|322395540|gb|EFX98086.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. ATCC 49242] Length = 452 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 146/448 (32%), Gaps = 80/448 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G G + + L + ++IDCG+ F +L + Sbjct: 1 MKLSFF--GAAGTVTGSRYLLE----NDGVRVLIDCGL-FQGLK----NLRLRNWAPFPA 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 K++ + +THAH DH G L L PVY S L E Sbjct: 50 PPKHISCVVLTHAHLDHSGYLPALVRDGFKGPVYCSDATRDLCEILLPDSAHLLEQDAEY 109 Query: 112 ---------------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 ER K++ + F G FS+ R H IP Sbjct: 110 ANRRGFSKHKPALPLYNATDAERALKRLSPLHFDRRRTFPEG-FSLRLHRAGH-IPGAAI 167 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I I+ +GD + D ++ L+ +ST R Sbjct: 168 VEIDWSGRKIIFSGDLGR---YDDPTMMDPSAIMEAH-----YLVMESTYGDRTHERRDA 219 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-----RKIVLLGSSLKRVV 265 + +I + G V++ F+ V R ++++ E++ + + +S + Sbjct: 220 EEALASIVNRTAARGGTVIIPAFA--VGRAQTLLFHLERLKSSRRLVDVPIYLNS--PMA 275 Query: 266 SVAIDVGIIKKDQLFLSDESFGL--------YPREQLIVIATGSQGEPRSALAQLSRG-- 315 A + + D L+ E + ++ I + + + ++ G Sbjct: 276 IDATETLCRRADDQRLTREEWRRACSVARYVESVDESKAINEDDAPKVIISASGMATGGR 335 Query: 316 --EM-RNVKLAEKDTVIFSSRAIPGNEVA--IGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + ++T++F+ G A +G ++ + + + + +S H Sbjct: 336 VLHHLKKFAPDPRNTILFAGFQAAGTRGAALVGGAQSVKIHGEYVPVRAEVDNLSMLSAH 395 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPL 396 N+L R R P++ HGEP Sbjct: 396 ADANELMRWLGNFRRPPRMTFLTHGEPT 423 >gi|262047857|ref|ZP_06020806.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|312976684|ref|ZP_07788433.1| RNA-metabolizing metallo-beta-lactamase superfamily [Lactobacillus crispatus CTV-05] gi|260571850|gb|EEX28422.1| metallo-beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|310896012|gb|EFQ45077.1| RNA-metabolizing metallo-beta-lactamase superfamily [Lactobacillus crispatus CTV-05] Length = 431 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 142/446 (31%), Gaps = 81/446 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-- 60 ++ G+ IG M Y ++ D G ++ +L PD ++ Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLG------EVYRPELKLPDESYQT 53 Query: 61 IMKER---------------KNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYAS 98 ++K + K + A +I+H H DH A++ L +P+YA Sbjct: 54 LIKNKLIGDVPNFYDPKLTGKPIDTDRWEHAAAYISHLHLDHSKAMNFLAPE--IPLYAG 111 Query: 99 PFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P LL A + P I+ + + VG +E +H Sbjct: 112 PITAHLLPALNEKGDFLLPAAGHDRTYTRPIIAAEYKKPIKVGDIILEIYPSDHDAYGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L++++P I +TGD + + G D + L+ + T Sbjct: 172 GLLVKTPDKQIAYTGDIR-----LHGYHPDWVRDFMQAAKNSDMLIIEGTGVSWPEEKHD 226 Query: 210 EK-----------GIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 E + + I + N + + T+ ++V R+ II Sbjct: 227 ENSEEFTGPKNEVELTEEIVRLQKANPERQITFNTYPTNVERLLRIIAD----------- 275 Query: 258 GSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 S ++VV A +I + D+ + L S E + + Sbjct: 276 --SPRKVVLHAQRAHLINESLDEDYPYYYMPNEEHYADLKPELEVSYDELLADNHKYMWQ 333 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +K + S A P + + + + SGH + Sbjct: 334 VVTDYDKLQKGGLYIHSNAEPLGDFDPAY----KPFVEALANNDIEYKALRCSGHADEKE 389 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAH 401 LK + ++P VLV +H L + Sbjct: 390 LKEIIAGVQPAVLVPVHTLHPELEEN 415 >gi|33601322|ref|NP_888882.1| hypothetical protein BB2340 [Bordetella bronchiseptica RB50] gi|33575758|emb|CAE32835.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 452 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 139/448 (31%), Gaps = 82/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G +++DCG+ F +L + + Sbjct: 2 LTLTCLGGAGTVTGSKHLLRHG----DTRLLVDCGL-FQGLK----NLRELNWQPLPVAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVY------- 111 ++ A+ +THAH DH G L L + ++A+P + E A Sbjct: 53 ADIDAVVLTHAHLDHCGYLPRLVAEGFRGRIHATPATRDVAELILLDSANLQEKDAEFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALVI 153 + + + G ++ R H I I Sbjct: 113 RKGYSRHAPALPLYRVVDAERALARFSDVALHRETALPGGATLTLRRAGH-ILGAATAQI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD +D ++ D D L+ +ST R Sbjct: 172 DIGGMRVVFSGDLGRYNDPVMHDPEDV--------RNADYLVIESTYGNRRHDAADPVEA 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLL--------- 257 + + G V++ F+ V R +++I + + L Sbjct: 224 LGAVIERTVLRGGTVVIPAFA--VGRAQTLIHALWKLRQAGRLHNVPVYLDSPMATSATE 281 Query: 258 --GSSLKRVVSVAIDVGIIKKDQLFLSDESFGL---YPREQLIVIATGSQGEPRSALAQL 312 A D ++ D R ++I+ L + Sbjct: 282 LLARHASEHKLSAQDCEAACAAVTYVRDVEGSKALSANRYPKVIISASGMATGGRVLHHM 341 Query: 313 --SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + RN L F + G ++ G + R+ Q + V AE AE P+ +S H Sbjct: 342 AAFGADHRNTLLFAG----FQAAGTRGRKLLDGATETRIYGQWMPVRAEVAELPM-LSAH 396 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPL 396 ++L R + P+ + +HGEP Sbjct: 397 ADSDELMRWLAGFQEAPRRVFIVHGEPQ 424 >gi|254498994|ref|ZP_05111694.1| metallo-beta lactamase family protein [Legionella drancourtii LLAP12] gi|254351771|gb|EET10606.1| metallo-beta lactamase family protein [Legionella drancourtii LLAP12] Length = 452 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 95/280 (33%), Gaps = 51/280 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + + + I++DCG+ + + L + + + Sbjct: 1 MQITFLGATETVTGSKYLLSFANKKN---ILLDCGLFQGEKE-----LRLRNWHSLPFDP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 K L A+ +THAH DH G L L P++ + L + A E Sbjct: 53 KILNAVILTHAHIDHTGYLPLLVKNGFKGPIFCTQGTKDLCDILLPDSAHLQEEDAKHAN 112 Query: 119 PCISFQAGDKVD-------------------------VGAFSIESVRVNHSIPETMALVI 153 + + + S + + H I + I Sbjct: 113 RHHYSKHNPALPLYTAKDAEKALKLFRPQPYNSVVELINEISFQFIPAGH-IIGASLVRI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +S +++ TGD ++ ++ T L+ +ST R + K I Sbjct: 172 QSEGKSLLFTGDLGRMNEPVMRAPTLVQ--------QTDYLVTESTYGDRLHEKDNPKDI 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 K I D G V++ F+ V R ++I+ ++ ++ Sbjct: 224 LKRIIDKTYQRGGSVIIPAFA--VGRTQAILYYLSELKKE 261 >gi|332212859|ref|XP_003255538.1| PREDICTED: DNA cross-link repair 1A protein [Nomascus leucogenys] Length = 1040 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 110/326 (33%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 727 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 779 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 780 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 829 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 830 QKVHVLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 889 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 890 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSVITTDMC----SSLVHL 931 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 932 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 989 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++K QW++PQ ++ Sbjct: 990 PYSEHSSYLEMKHFVQWLKPQKIIPT 1015 >gi|293380773|ref|ZP_06626819.1| RNA-metabolizing metallo-beta-lactamase [Lactobacillus crispatus 214-1] gi|290922659|gb|EFD99615.1| RNA-metabolizing metallo-beta-lactamase [Lactobacillus crispatus 214-1] Length = 431 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 145/444 (32%), Gaps = 77/444 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-- 60 ++ G+ IG M Y ++ D G ++ +L PD ++ Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLG------EVYRPELKLPDESYQT 53 Query: 61 IMKER---------------KNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYAS 98 ++K + K + A +I+H H DH A++ L +P+YA Sbjct: 54 LIKNKLIGDVPNFYDPKLTGKPIDTDRWEHAAAYISHLHLDHSKAMNFLAPE--IPLYAG 111 Query: 99 PFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P LL A + P I+ + + VG +E +H Sbjct: 112 PITAHLLPALNEKGDFLLPAAGHDRTYTRPIIAAEYKKPIKVGDIILEIYPSDHDAYGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L++++P I +TGD + + G D + L+ + T Sbjct: 172 GLLVKTPDKQIAYTGDIR-----LHGYHPDWVRDFMQAAKNSDMLIIEGTGVSWPEEKHD 226 Query: 210 EK-----------GIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 E + + I + N + + T+ ++V R+ II RK+VL Sbjct: 227 ENSEEFTGPKNEVELTEEIVRLQKANPERQITFNTYPTNVERLLRII---ADSPRKVVLH 283 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 +R + + L++E + E + S E + + + Sbjct: 284 A---QRAHLIKESLDEDYPYYYMLNEEHYADLKPELEV-----SYDELLADNHKYMWQVV 335 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + +K + S A P + + + + SGH +LK Sbjct: 336 TDYDKLQKGGLYIHSNAEPLGDFDPAY----KPFVEALANNDIEYKALRCSGHADEKELK 391 Query: 378 RMYQWIRPQVLVAIHGEPLHLVAH 401 + ++P VLV +H L + Sbjct: 392 EIIAGVQPAVLVPVHTLHPELEEN 415 >gi|315653302|ref|ZP_07906224.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus iners ATCC 55195] gi|315489227|gb|EFU78867.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus iners ATCC 55195] Length = 429 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 86/427 (20%), Positives = 148/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P I +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKIAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 +K K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VKYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPNVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|255718827|ref|XP_002555694.1| KLTH0G15202p [Lachancea thermotolerans] gi|238937078|emb|CAR25257.1| KLTH0G15202p [Lachancea thermotolerans] Length = 755 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 75/275 (27%), Gaps = 44/275 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 + L F LGG E+G + + Y K +M+D GV L P Sbjct: 8 LSKTSLRFYSLGGGNEVGRSCHILQY----KGKTVMLDAGVHPAHQGL----ASLPFYD- 58 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR--------- 109 + + + I+H H DH +L + V+ + + Sbjct: 59 -EFDLSTVDVLLISHFHLDHAASLPYVMQRTNFRGRVFMTHPTKAIYRWLLSDFVKVTSI 117 Query: 110 --------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 + + +DV + H + + Sbjct: 118 GSTSFSDKDENLYTDEDLAESFDRIETIDFHSTIDVNGIKFVAFHAGH-VLGAAMFQVEI 176 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 I+ TGD+ + D L + L+ +ST + KK Sbjct: 177 AGLKILFTGDYSRETDRHLNS-------AEVPPSSSDVLIVESTFGTATHEPRINRE-KK 228 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I V ++ R + I+ I ++ Sbjct: 229 LTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEY 263 >gi|297687406|ref|XP_002821207.1| PREDICTED: DNA cross-link repair 1A protein-like [Pongo abelii] Length = 1039 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 726 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 778 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 779 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 828 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 829 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 888 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 889 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 930 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 931 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 988 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKIIPT 1014 >gi|227877656|ref|ZP_03995703.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus JV-V01] gi|256844198|ref|ZP_05549685.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus 125-2-CHN] gi|256850740|ref|ZP_05556163.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] gi|227862752|gb|EEJ70224.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus JV-V01] gi|256614103|gb|EEU19305.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus 125-2-CHN] gi|256712453|gb|EEU27451.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] Length = 431 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 143/446 (32%), Gaps = 81/446 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-- 60 ++ G+ IG M Y ++ D G ++ +L PD ++ Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLG------EVYRPELKLPDESYQT 53 Query: 61 IMKER---------------KNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYAS 98 ++K + K + A +I+H H DH A++ L +P+YA Sbjct: 54 LIKNKLIGDVPNFYDPKLTGKPIDTDRWEHAAAYISHLHLDHSKAMNFLAPE--IPLYAG 111 Query: 99 PFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P LL A + P I+ + + VG +E +H Sbjct: 112 PITAHLLPALNEKGDFLLPAAGHDRTYTRPIIAAEYKKPIKVGDIILEIYPSDHDAYGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L++++P I +TGD + + G D + L+ + T Sbjct: 172 GLLVKTPDKQIAYTGDIR-----LHGYHPDWVRDFMQAAKNSDMLIIEGTGVSWPEEKHD 226 Query: 210 EK-----------GIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 E + + I + N + + T+ ++V R+ II Sbjct: 227 ENSEEFTGPKNEVELTEEIVRLQKANPERQITFNTYPTNVERLLRIIAD----------- 275 Query: 258 GSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 S ++VV A +IK+ D+ + L S E + + Sbjct: 276 --SPRKVVLHAQRAHLIKESLDEDYPYYYMPNEEHYADLKPELEVSYDELLADNHKYMWQ 333 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +K + S A P + + + + SGH + Sbjct: 334 VVTDYDKLQKGGLYIHSNAEPLGDFDPAY----KPFVEALANNDIEYKALRCSGHADEKE 389 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAH 401 LK + ++P VLV +H L + Sbjct: 390 LKEIIAGVQPAVLVPVHTLHPELEEN 415 >gi|196038912|ref|ZP_03106219.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196030057|gb|EDX68657.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] Length = 419 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 113 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNALLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|40788960|dbj|BAA07646.2| KIAA0086 [Homo sapiens] Length = 1044 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 731 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 783 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 784 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 833 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 834 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 893 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 894 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 935 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 936 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 993 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 994 PYSEHSSYLEMKRFVQWLKPQKIIPT 1019 >gi|223278374|ref|NP_055696.3| DNA cross-link repair 1A protein [Homo sapiens] gi|311033461|sp|Q6PJP8|DCR1A_HUMAN RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1 homolog A; Short=hSNM1; Short=hSNM1A gi|16753254|gb|AAH13124.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|55960759|emb|CAI12637.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|168274358|dbj|BAG09599.1| DNA cross-link repair 1A protein [synthetic construct] Length = 1040 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 727 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 779 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 780 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 829 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 830 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 889 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 890 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 931 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 932 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 989 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKIIPT 1015 >gi|38566205|gb|AAH62582.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens] Length = 1040 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 727 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 779 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 780 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 829 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 830 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 889 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 890 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 931 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 932 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 989 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKIIPT 1015 >gi|47060293|gb|AAT09762.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|119569874|gb|EAW49489.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119569875|gb|EAW49490.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1040 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 727 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 779 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 780 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 829 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 830 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 889 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 890 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 931 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 932 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 989 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKIIPT 1015 >gi|229011082|ref|ZP_04168276.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus mycoides DSM 2048] gi|228750254|gb|EEM00086.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus mycoides DSM 2048] Length = 417 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 59/418 (14%), Positives = 134/418 (32%), Gaps = 72/418 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A Sbjct: 51 AVFLSHIHEDHTMGLPLLTKYGYKKKIWTTRYTKEQLPAYFEKWGNYNLSKGWNLPYNDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 NIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ ++ + + +I + A+ Sbjct: 171 SNIL------RANLPENLRSDIKIAIVDAAY--HTDDVSQKERVDELCAEIERVAQNKGT 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 V S+ R + I+ + G + + + + V + Sbjct: 223 VLLPLPSLGRAQDIVFYLYERYKELPIIVDKEILAGFEEMFIYKDWLKNKEKLERVVEVL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ E++++IF+ Sbjct: 283 KRNIIVMDNDICMQNSYGIVVMSDANMQTKRAQLY------YEQLRHEERNSIIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 G+ RV E V H +D+K M + P+ V +H Sbjct: 337 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSISDVKEMLNTLLPEHTVLVHA 386 >gi|295693531|ref|YP_003602141.1| hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus crispatus ST1] gi|295031637|emb|CBL51116.1| Hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus crispatus ST1] Length = 431 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 143/446 (32%), Gaps = 81/446 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-- 60 ++ G+ IG M Y ++ D G ++ +L PD ++ Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLG------EVYRPELKLPDESYQT 53 Query: 61 IMKER---------------KNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYAS 98 ++K + K + A +I+H H DH A++ L +P+YA Sbjct: 54 LIKNKLIGDVPNFYDPKLTGKPIDTDRWEHAAAYISHLHLDHSKAMNFLAPE--IPLYAG 111 Query: 99 PFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P LL A + P I+ + + VG +E +H Sbjct: 112 PITAHLLPALNEKGDFLLPAAGHDRTYTRPIIAAEYKKPIKVGDIILEIYPSDHDAYGAT 171 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L++++P I +TGD + + G D + L+ + T Sbjct: 172 GLLVKTPDKQIAYTGDIR-----LHGYHPDWVRDFMQAAKNSDMLIIEGTGVSWPEEKHD 226 Query: 210 EK-----------GIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 E + + I + N + + T+ ++V R+ II Sbjct: 227 ENSEEFTGPKNEVELTEEIVRLQKANPERQITFNTYPTNVERLLRIIAD----------- 275 Query: 258 GSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 S ++VV A +IK+ D+ + L + E + + Sbjct: 276 --SPRKVVLHAQRAHLIKESLDEDYPYYYMPNEEHYADLKPELEVTYDELLADNHKYMWQ 333 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +K + S A P + + + + SGH + Sbjct: 334 VVTDYDKLQKGGLYIHSNAEPLGDFDPAY----KPFVEALANNDIEYKALRCSGHADEKE 389 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAH 401 LK + ++P VLV +H L + Sbjct: 390 LKEIIAGVQPAVLVPVHTLHPELEEN 415 >gi|94984264|ref|YP_603628.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94554545|gb|ABF44459.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 485 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 130/439 (29%), Gaps = 102/439 (23%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHV 93 ++IDCG+ F + P F +L+A+ +THAH DH G L L Sbjct: 26 VLIDCGL-FQGGEELEARNREP-FPFA---APDLLAVLVTHAHLDHIGRLPLLVRRGYRG 80 Query: 94 PVYASPFAIGLLE------AKRVYERVSKKIP---------------------------- 119 P+Y +P L E A+ E + + Sbjct: 81 PIYCTPPTAALAEAVLLDSARLQVEGFRQDLRKARRIGREADVLEPLYDEEDVHRTLALL 140 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G+ VG + S R H I + LVI ++ +GD + + T Sbjct: 141 RPTLHYGETTRVGPLRVTSQRAGH-ILGSAYLVIEGEGQRLLMSGDLGNRESGLQLVFT- 198 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN---AKGCVLVTTFSSS 236 + A+M ++T A R S DI+ A G +L+ TF+ Sbjct: 199 -------PPPPVDAVMLETTYANRTHR--SRAATLAEFRDILHQSIRAGGKILIPTFA-- 247 Query: 237 VSRIRSIIDIAE----------------------------QIGRKIVLLGSSLKRVVSVA 268 + R + I+ I + G +++ + + Sbjct: 248 IERAQMILYILRDMMAAGEVPRIPVFLDSPLATRATADYFEFGEELIPPVRTAIQNGEDP 307 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG--EPRSALAQLSRGEMRNVKLAEKD 326 + + Y +I+ G + L + K Sbjct: 308 FHPSTLHVVPTSAESQRINRYDGPAIIIAGNGMMNGGRIQHHL------KHNLWK--PST 359 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDLKRMYQW 382 +++ S PG G I + VH S H +DL Sbjct: 360 SLVIVSYQSPG--SLGGRILAGQSPVRILGEEVIVRAQVHTIGGFSAHADQDDLLTFLAD 417 Query: 383 I-RPQVLVAIHGEPLHLVA 400 P+V + IHGE + Sbjct: 418 TGNPRVWL-IHGEVPVMEE 435 >gi|309804514|ref|ZP_07698580.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|312871333|ref|ZP_07731430.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a] gi|308166167|gb|EFO68384.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|311093126|gb|EFQ51473.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a] Length = 429 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 85/427 (19%), Positives = 148/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P I +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKIAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 ++ K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VQYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPSVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|288930974|ref|YP_003435034.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM 10642] gi|288893222|gb|ADC64759.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM 10642] Length = 617 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 88/596 (14%), Positives = 178/596 (29%), Gaps = 107/596 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ F LG E+ +M L G I++DCG+ D + + D + Sbjct: 3 KIRF--LGACREVTGSMHLLDTGKTK----ILLDCGMRQGVDSVEREKHIPFDPS----- 51 Query: 65 RKNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLE------AKRVYERVSKK 117 + I ++HAH DH G + L V + + E AK + E K Sbjct: 52 --EIDYIILSHAHIDHSGLIPYLYLRGFRGRVVTTTATRAIAELLLLDSAKIMKEEYEKS 109 Query: 118 I---------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 ++ V + + + H I + ++R I + Sbjct: 110 NIPPLFDERDVVEVMSHFDAYPYNKPVRLQDVKLSFLDAGH-ILGSAVTLLRINGLQICY 168 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK-GIKKNIYDIM 221 TGD ++ T + L+ +ST R ++ K + Sbjct: 169 TGDIGSGTSPLMNPPT--------PPKEADVLIMESTYGNRRHEDRAKAVETMKAVISDT 220 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSV 267 A G VL+ F+ V R + ++ + +G ++ + S ++ Sbjct: 221 IKAGGKVLIPVFA--VGRAQEVLYVLRNLRDKIRVKVYLDTPLGSRVTDIYKSYSNMLRK 278 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG----EM-RNVKL 322 ++ + + + +A ++ + + + G + Sbjct: 279 EFYELFLRGKNPIEFEGLEYVTTYNRSRELAKSNEPCIILSASGMLEGGRVLNHLPYILQ 338 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV------SGHPYPNDL 376 E TV+F G I + + V V ++ + +V S H + L Sbjct: 339 DENSTVLFVGYQAEG--TLGRQIVDG--NKLVYVNGDEVDVRCNVVNVSAFSAHADEDGL 394 Query: 377 KRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL-------FPD 427 + + P+ + +HGE A + L + G+ L Sbjct: 395 VGFVEGMDYYPRRIYIVHGE---EEAARNLLARLPKVRKSIPERGEEADLGWGGRAGMDG 451 Query: 428 PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVD 487 E + D + + + L G + ++L + + G Sbjct: 452 EREGRAIIDFKPGFVDFMGLSIHPEPLL-----LVREGEM---LILRRYGEVVG------ 497 Query: 488 IGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESIS-SALRSLLKKVW 542 G ++ + V + V+ D+ LRE + L L K Sbjct: 498 ----ELMSAGEELAVEIRAAVKSAEVEKISVEAGDIARLREFMEAGILSKKLSKEI 549 >gi|156840674|ref|XP_001643716.1| hypothetical protein Kpol_1009p4 [Vanderwaltozyma polyspora DSM 70294] gi|156114339|gb|EDO15858.1| hypothetical protein Kpol_1009p4 [Vanderwaltozyma polyspora DSM 70294] Length = 778 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 73/568 (12%), Positives = 158/568 (27%), Gaps = 81/568 (14%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + FL LGG E+G + + + K +M+D G+ L P Sbjct: 5 SDTSFKFLSLGGSNEVGRSCHVLQF----KGKTVMLDTGIHPAYQGL----ASLPFYD-- 54 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + + + I+H H DH +L + V+ + + Sbjct: 55 EFDLSKIDVLLISHFHLDHAASLPYVMKRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIG 114 Query: 111 -------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + + +DV + H + I Sbjct: 115 TTSSEKDENLYTDEDLADSFDKIETIDYHSTMDVNGIKFTAFHAGH-VLGAAMFQIEIAG 173 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 ++ TGD+ + D L + L+ +ST + K + Sbjct: 174 LRVLFTGDYSREMDRHLNS-------AEVPPLPSDVLIVESTFGTATHEPRLNRE--KKL 224 Query: 218 YDIMKNAKGCVL-VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 ++ + G V ++ R + ++ I ++ + S + + A ++ Sbjct: 225 TQLIHSTVGRGGRVLMPVFALGRAQELMLILDEYWSQHADELGSGQVPIYYASNLAK--- 281 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + +++ + + SQ P +S + + +V+ +S P Sbjct: 282 -KCMSVYQTYVNMMNDDIRKKFRDSQTNPF-IFKHISYLKNLDEFQDFGPSVMLAS---P 336 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY--------QWIRPQVL 388 G ++N L + + + V ++G+ + + P V Sbjct: 337 GM------LQNGLSRDLLEKWCPEDKNMVLITGYSVEGTMAKYIMLEPENIPSINNPDVS 390 Query: 389 VA--IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFL 446 + E + AH + QE I + + ++ + + + L Sbjct: 391 IPRRCQIEEISFAAHVDF--QENIEFIEKISANNVILVHGESNPMGRLKSALLSNFSSLK 448 Query: 447 IGKFADLGIAKRR----QLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDGGKIHK 502 + R L F G + NI EI + I + Sbjct: 449 GTENEVHVFNPRNCVEVDLEFKGIKVAKAV----GNIVD--EIQKEETSILKEETSVIKE 502 Query: 503 LLLKTVITTVVDLPQFRRKDLKLLRESI 530 + T L + + E I Sbjct: 503 ETQDNIEETEEQLETGQSIKEEENTERI 530 >gi|196045165|ref|ZP_03112398.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196024167|gb|EDX62841.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] Length = 419 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 62/446 (13%), Positives = 140/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---KRVYERVSKKIP------ 119 A+F++H HEDH L L + ++ + + L A K +++ Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWHVPYTDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + V + + + + ++ + ++GD+ + Sbjct: 113 NVKDLNYVYIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L + I + D+ + I + +I + A + Sbjct: 173 SNIL------RANLPEKLHGDIKVAIVDAAY--HTDDVSQHERINELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 225 TLLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFQQMFAYKDWIKKNEELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDSGTQHSYGIVVMSDANMQTKRAQLY------YEQLRHDERNSIIFTGHIA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSIRDVKEMLNALLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|255513556|gb|EET89822.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 419 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 89/238 (37%), Gaps = 31/238 (13%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S I++D GV +D FP IT +E N+ A+FI+HAH DH G + + Sbjct: 2 VESGSTRILLDAGVKLGSEDQ------FPKIT--DEELGNIDAVFISHAHLDHCGYVPHI 53 Query: 88 WS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ-------------AGDKVDVGA 133 +S VYA+ + L++ + +S + ++ + Sbjct: 54 YSAEYRGEVYATKPTLELMQVLISDYMRISEPSNVSKKGLSEMLKHQRAVEYKREISIKD 113 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 I + H I + + + +++TGD L +L + N Sbjct: 114 LKITFIPAGH-ILGSALIRVTDGKNTLIYTGDINLAKTKLLNG-------ADLKNLSGDV 165 Query: 194 LMCDSTNAMREGTCISEKGIKKNI-YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ +ST + SE I K++ Y I K V S +V R + ++ + Sbjct: 166 LITESTYGGKTDIFESEVSILKSLVYGIKDTIKNGGKVVIPSFAVGRAQEVLLSIDDY 223 >gi|261252202|ref|ZP_05944775.1| metallo-beta-lactamase family protein RNA-specific [Vibrio orientalis CIP 102891] gi|260935593|gb|EEX91582.1| metallo-beta-lactamase family protein RNA-specific [Vibrio orientalis CIP 102891] Length = 438 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 81/461 (17%), Positives = 146/461 (31%), Gaps = 88/461 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG I + + ++ I++DCG+ G D ++ F L A+ Sbjct: 7 GGKHTITGSC----HELRDEQQAILVDCGL------FQGADTRPLEVEFATSH---LNAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------------- 111 ITHAH DH G L L + + P+Y S L+ Sbjct: 54 VITHAHIDHIGRLPWLLATGFNQPIYCSEATAELIPLMLEDSLKLQLGLKPKQAQRILNK 113 Query: 112 -ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ K P + + V + +I H + V + +V +GD + Sbjct: 114 ISKLLKPQPYSQWVELEPVLQDSMAIRFQPAGHILGSAYIEVRLANQEVVVFSGDLGPSN 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVL 229 +L D + L+ ++T + I+ + + K I D G +L Sbjct: 174 TPLLPDPLSPER--------ADYLLIETTYGDKPHDDIATRSERLKAIIDRSLEDGGTIL 225 Query: 230 VTTFSSSVSRIRSII----DIAEQIGRKIVL-----------LGSSLKRVVSV------- 267 + FS V R + ++ + I + + S +R + Sbjct: 226 IPAFS--VGRTQELLFDIEQLIHDHQIDISIPIILDSPMAQRVTRSYRRFKQLWGQEAKQ 283 Query: 268 -AIDVGIIKKDQLFLSDESFGLYPR--------EQLIVIATGS----QGEPRSALAQLSR 314 + ++ E + + R + ++ S G L L Sbjct: 284 RLKMHRHPLAFEQCITVEDYRTHQRLVNRLQSTREAAIVVAASGMCQGGRIMDYLKALLP 343 Query: 315 GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 E ++ + + G E+ G + + +Q V V A+ S H + Sbjct: 344 DERTDI-----LLAGYQAEGTLGREIQSGAMAVEIDQQEVEVNAQIHTMS-GYSAHADKD 397 Query: 375 DLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACV 413 DL R Q I P+ + IHGEP Q G + Sbjct: 398 DLLRFVQGIEPTPKEVHLIHGEPNTQDTFASTLKQLGYHVI 438 >gi|126649967|ref|ZP_01722200.1| Zn-dependent hydrolase, beta-lactamase superfamily protein [Bacillus sp. B14905] gi|126593139|gb|EAZ87101.1| Zn-dependent hydrolase, beta-lactamase superfamily protein [Bacillus sp. B14905] Length = 356 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 65/395 (16%), Positives = 109/395 (27%), Gaps = 52/395 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LGGVGE G N + K I++DCGV P P IT + + Sbjct: 3 KIEILGGVGEYGRNCFYIE----NQGKAILLDCGVMKNSQKTP------PAIT--LNHVE 50 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+FI+H+H DH GAL L V S L+ +S Sbjct: 51 KLKAVFISHSHIDHVGALPLLEEMGYKGQVLMSHKTSQQLQ-----HPISHIRTFHPDSR 105 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G + V + + + ++ I I +GD+ D + + Sbjct: 106 GTWIKVNDYLAFQWGYSGHLIGSVWYKILFFEKVIFFSGDYVRDSYLLK---------AS 156 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + E ++ I + + + + + S S + + Sbjct: 157 LPVEDGTIYDVAFIDSGHIEKNIDNHEVLRKLETYVNEHPNNAFIFPSSFSGKTVDIVTY 216 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 +A++ R I + + I ++ L + Sbjct: 217 LAQRTSRAICIDTKLQSLFKQYEEEPENIWPHRMTLQVGHKECTGDGHTLYFVREQDEAR 276 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 LA+ E E SR V++ Sbjct: 277 LEELAK----EHPTAIFIETG----YSRPSFNQHVSM-----------------QPSQEF 311 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 HP D + Q I + + H HL Sbjct: 312 FYKTHPDYQDTISLSQSIHARQTIYFHSPHTHLET 346 >gi|66356658|ref|XP_625507.1| cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II] gi|46226496|gb|EAK87490.1| cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II] Length = 780 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 57/412 (13%), Positives = 121/412 (29%), Gaps = 77/412 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++ E L LG E+G + + + + +M DCG+ P G P Sbjct: 19 IEGETLYIQVLGAGCEVGRSCVVVSF----KGRSVMFDCGI-HPAFSGIG---SLPVFDA 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDL--WSFLHVPVYASPFAIGLLE---------AKR 109 I + ITH H DH GA + + V+ + + + K Sbjct: 71 ID--VSTIDLCLITHFHLDHSGATPYFVSLTDFNGKVFMTEPTKAICKLVWQDYARVNKF 128 Query: 110 V------------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMA 150 + + K I +V++ H + Sbjct: 129 SAGSIESEEAPLSSINLYTEKDIEKAINMTEIIDFRQQVELDGIRFSCYGAGH-VLGACM 187 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 ++ I++TGD+ +DD + I + L+C+ST R + Sbjct: 188 FLVEIGGVRILYTGDYSREDDRHVPR-------AEIPPIDVHVLICESTYGTRIHEPRID 240 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR 263 + K+ + + ++ R + ++ I E+ ++ S + Sbjct: 241 RE-KRFLGGVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPSIQNVPIIYASPMSI 299 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + I + G+ P + + S E +++ Sbjct: 300 KCMRVFETYINQCGDSVRRQADLGINPFQFNYIKTVNSLNEI------------KDIIYN 347 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 V+ ++ PG ++N + A D + ++G+ Sbjct: 348 PGPCVVMAA---PGM------LQNGTSRDIFEIWAPDKRNGIILTGYAVRGT 390 >gi|319763809|ref|YP_004127746.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC] gi|330823927|ref|YP_004387230.1| beta-Casp domain-containing protein [Alicycliphilus denitrificans K601] gi|317118370|gb|ADV00859.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC] gi|329309299|gb|AEB83714.1| Beta-Casp domain protein [Alicycliphilus denitrificans K601] Length = 454 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 68/451 (15%), Positives = 132/451 (29%), Gaps = 87/451 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + LGG G + + L +G K +++DCG+ F L + + Sbjct: 1 MTVSLTFLGGAGTVTGSKYLVRHG----GKALLVDCGL-FQGYKLLRQR----NWRPLPV 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEA------KRVYERVSK 116 E + A+ +THAH DH G L L PV+ + L E + Sbjct: 52 EPHEIDAVLLTHAHLDHSGYLPLLAKGGFGGPVFCTSGTRDLCAILLPDSGHLQEEEAAY 111 Query: 117 KIPCISFQAGDKVDVG-------------------------AFSIESVRVNHSIPETMAL 151 + + + + R H I ++ Sbjct: 112 LNRHHLSKHEPALPLYTRLDAQHSLSLLRAQPARTPFEPLPGWRATFTRAGH-ILGAASI 170 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 ++ I+ +GD D +L D ++ +ST R S Sbjct: 171 LLEVGGRRILFSGDLGR-PDDLLMCAPD-------APPAADTVLVESTYGDRSHPPGSVL 222 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID 270 + + + G +V F+ V R ++++ ++ + L L + + Sbjct: 223 DELGPALARLAARG-GVAVVPVFA--VGRAQTVLHAIARLKARGDLPAR-LPVYLDSPMA 278 Query: 271 VGIIKKDQLFLSDESFGLYPREQL-----------------------IVIATGSQGEPRS 307 V + + + + + I+++ Sbjct: 279 VSTTELFEDHVGEHCLSHADLHAMARGTTLVHSVEESKALARLHGPRIILSASGMATGGR 338 Query: 308 ALAQLS--RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L L+ G+ RN+ + + A N I R VE V+ Sbjct: 339 VLHHLALHAGDHRNMIVLTGHQAGGTRGARIANGEKSIRILGRDVEIRAEVVQ-----LA 393 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGE 394 S H N + + + P+ + +HGE Sbjct: 394 TASAHADGNQVLDWLRAMPAAPRRVYVVHGE 424 >gi|120555563|ref|YP_959914.1| beta-lactamase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325412|gb|ABM19727.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 453 Score = 90.1 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 67/460 (14%), Positives = 141/460 (30%), Gaps = 106/460 (23%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------------SFPKDDLPG 50 +L F LGG G + + Y +++DCG+ FP D Sbjct: 1 MKLRF--LGGTGTVTGS----RYLLSDDNHRMLVDCGMYQGVKTLRRRNWAKFPVD---- 50 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--- 106 + A+ +THAH DH G L L +Y + L + Sbjct: 51 --------------PSTIDAVVLTHAHIDHSGYLPALVKNGFKGKIYCTKATHELCKVLL 96 Query: 107 ---------------AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIES 138 K+ + + A + + V F ++ Sbjct: 97 PDAGFLQEEDAKYAFRKKFSKHEKPEPLFTEKDAWEALKHFESLHYHERFEPVKGFEVQF 156 Query: 139 VRVNHSIPETMALVIRS-PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 H + + V +V +GD DD I+ L+C+ Sbjct: 157 TPAGHILGSSCVHVTHKSSSRTVVFSGDVGRQDDIIMRPP--------EPISHADVLVCE 208 Query: 198 STNAMR-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---GRK 253 ST R G EK +++ I A +V + +V R + ++ + ++ GR Sbjct: 209 STYGDRTHGETDPEKDLEQIITKT---AGRGGIVLMPAFAVGRAQMLLYVIHKLMGQGRI 265 Query: 254 I--------VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 + + + + + + D++ + E+ I + Sbjct: 266 PKLPVYLNSPMAIKATEIFCKHHKEHKLNGPQCELIDDKTQFVRTVEESIELDAARYPCI 325 Query: 306 RSALAQLSRG----EM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + + ++ G + + +++V+F+ PG + + Sbjct: 326 IISASGMASGGRVLHHLKTLLPNPRNSVVFAGFQAPG--TRGDALVKGAESVKIHGEYWP 383 Query: 361 AECPVH----VSGHPYPNDLKRMYQW--IRPQVLVAIHGE 394 + +H +S H ++ + + ++P+ + HGE Sbjct: 384 VKAEIHNLDSMSAHGDYQEILQWLEQGSLKPEKVYVTHGE 423 >gi|83717528|ref|YP_438662.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] gi|83651353|gb|ABC35417.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] Length = 589 Score = 90.1 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 79/281 (28%), Gaps = 54/281 (19%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LG + + L + +++DCG+ F L + + Sbjct: 130 RMKLTFLGATETVTGSKYLLE----DAGTRVLVDCGL-FQGTK----KLRLCNWNPLPVP 180 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVS 115 ++ A+ +THAH DH G L L PVY + L E + Sbjct: 181 ADSIDAVVLTHAHLDHSGYLPVLVREGFRGPVYCTHGTAALSEIMLMDSARLLEEEADFA 240 Query: 116 KKIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALV 152 + + + + H I +++ Sbjct: 241 NRHGYSKHHPALPLYTTDDAQRALARLAPRDFDAPTTLAAGLNFRLLPAGH-ILGAASVI 299 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEK 211 + + +GD D I+ + L+ +ST R E Sbjct: 300 VCWRHTLLAFSGDLGRTHDPIMR--------APVPPVHADYLVVESTYGDRLHDTSDPET 351 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 352 ELADVFAKTFARG-GVVVMPCFT--VGRAQEILYYIAQLKK 389 >gi|309803905|ref|ZP_07697989.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|309809182|ref|ZP_07703054.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] gi|308164000|gb|EFO66263.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|308170482|gb|EFO72503.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] Length = 429 Score = 90.1 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 85/427 (19%), Positives = 149/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P + +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKLAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-----KGIKKNIYDI 220 +L ++ G+ G L+ +ST SE K + I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKDEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 ++ K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VQYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPSVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|109090605|ref|XP_001090942.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta] Length = 1039 Score = 90.1 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 111/329 (33%), Gaps = 47/329 (14%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + + Sbjct: 726 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHTLPLDIEC 778 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 779 VVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMEHSLLAD--------- 828 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 829 QKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCGTYSIGKEKVFLA 888 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 889 IADVLGSKV---GMSQEKYKTL-----------RCLNIPEINSLITTDMC----SSLVHL 930 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + N+ + + Sbjct: 931 LPMMQINFKGLQNHLKKYGGKYNQILAFRPTGWTHS-----NKFPRIADVIPQTKGNISI 985 Query: 366 H---VSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++KR QW++PQ ++ Sbjct: 986 YGIPYSEHSSYLEMKRFVQWLKPQKIIPT 1014 >gi|325523737|gb|EGD01994.1| metallo-beta-lactamase family protein [Burkholderia sp. TJI49] Length = 462 Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 85/276 (30%), Gaps = 51/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + +++DCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGSKYLLEH----DGLRVLVDCGL-FQGTK----NLRLRNWRTLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 L A+ +THAH DH G L L PVY +P L E A+ E Sbjct: 52 DTLDAVVVTHAHLDHSGYLPVLARDGYRGPVYCTPATAALCEILLRDSARLQEEEADFAN 111 Query: 119 PC------------------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVI 153 + V +G S+ + H + +V Sbjct: 112 RHGYSKHHPALPLYTTDDAQRALQLLKPRPFDECVSLGDGLSLRLLPAGHILGAASIVVH 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 P + +GD DD I+ ++ +ST R + Sbjct: 172 WRPHRVLAFSGDLGRSDDPIMH--------APRAPVHADFVVVESTYGDRLHPDSDPEAE 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++D G V++ +F+ V R + I+ + Sbjct: 224 LAALFDATFARGGVVVIPSFT--VGRAQEILYYIAR 257 >gi|223997482|ref|XP_002288414.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975522|gb|EED93850.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 557 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 96/282 (34%), Gaps = 53/282 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + PLG E+G + L + S + I++DCG+ D + G P + Sbjct: 2 EDIMTITPLGSGQEVGRSCHLLTFRSTT----ILLDCGIHPGYDGMAG----LPFFDRVD 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLE------AKRVYERV 114 + + + ITH H DH +L ++ + ++ K + + Sbjct: 54 --PEQVDVLLITHFHLDHAASLPYFTERTGFKGRIFMTHPTKAVIRLLLGDYLKLMMMKK 111 Query: 115 S-----------------------KKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMA 150 KI I + +++ ++ H + Sbjct: 112 GSGGADKDDNQDVLYTEADLQSCVDKIELIDYHQTIDLNLPSGLKFHALNAGH-VLGAAM 170 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 I ++++TGD+ +++D L L L+ +ST ++ +E Sbjct: 171 FFIEVGGRSVLYTGDYSMEEDRHLM----AAELPKYHASP-DLLIVESTYGVQVHASRAE 225 Query: 211 KGIK--KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + I I+ C++ ++ R + ++ I ++ Sbjct: 226 REARFTGTIERIVTGGGRCLI---PVFALGRAQELLLILDEY 264 >gi|240274420|gb|EER37936.1| endoribonuclease ysh-1 [Ajellomyces capsulatus H143] Length = 240 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 73/231 (31%), Gaps = 44/231 (19%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+F LGG E+G + + Y K +M+D G+ KD P Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKDGF----AALPFFDDFD 73 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV---------- 110 + + I+H H DH +L + S V+ + + + Sbjct: 74 --LSTVDILLISHFHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSS 131 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + + I + I H + +I N Sbjct: 132 SSDQRTTLYTEQDHLSTLSHIEAIDFNTTHTINNIRITPFPAGH-VLGAAMFLISIAGLN 190 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREGTCI 208 I+ TGD+ ++ D+ + A +G + L+ +ST + Sbjct: 191 ILFTGDYSREE--------DRHLISAEAPKGVKVDVLITESTFGVSSNPPR 233 >gi|229189886|ref|ZP_04316896.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 10876] gi|228593560|gb|EEK51369.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 10876] Length = 417 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 54/446 (12%), Positives = 133/446 (29%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ ++ P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKILFDCGINRSYENSYPKIEGEVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------ 113 A+F++H HEDH L L + ++ + + L K Sbjct: 51 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWKLPYSDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 HIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + +I + + + Sbjct: 171 SNIL------RANLPEKFGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVMQNKGI 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + + + Sbjct: 223 ALLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKDWIKNNEELKRIMESL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 283 KRSIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ V + V H D+K M + P+ V +H Sbjct: 337 KGSF--------AEKVMKEHVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 388 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 389 EDTDRLQQKLSTAGYENVYSLAMERI 414 >gi|301755506|ref|XP_002913597.1| PREDICTED: DNA cross-link repair 1A protein-like [Ailuropoda melanoleuca] gi|281347740|gb|EFB23324.1| hypothetical protein PANDA_001409 [Ailuropoda melanoleuca] Length = 1049 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 117/326 (35%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L P+Y S LL +K +K + Sbjct: 736 AYFLTHFHSDHYAG---LSKNFTFPIYCSEITGNLLRSKL----HVQKQYVHPLPMDTEC 788 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P GN+ +HTGD++ D + Sbjct: 789 IVNGVKVVLLDANH-CPGAVMILFYLPNGNVLLHTGDFRADPTMER---------SRLAG 838 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E + S++ + + + A VLV + S+ + + + Sbjct: 839 QRVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLVVCGTYSIGKEKVFLA 898 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ + I + F++ + L+ + + Sbjct: 899 IADVLGSKV---GMSQEKY--KTLQCLNIPELNSFITTDMCSSLVH--LLPMMQINFKAL 951 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +S L + + + S++ + + + + + Sbjct: 952 QSHLKKCGGKYDQVLAFRP-TGWTHSNKLTS------------IADIIPQTKGNISIYGI 998 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 999 PYSEHSSYLEIKRFVQWLKPQKIIPT 1024 >gi|225863649|ref|YP_002749027.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|300117284|ref|ZP_07055074.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] gi|225786341|gb|ACO26558.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|298725119|gb|EFI65771.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] Length = 419 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 113 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|311070580|ref|YP_003975503.1| putative hydrolase [Bacillus atrophaeus 1942] gi|310871097|gb|ADP34572.1| putative hydrolase [Bacillus atrophaeus 1942] Length = 264 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I + +L IF+TH H DH L Sbjct: 17 FYLETDDHAFLVDAGLS--GKAMDGL------MAQIGRNMDDLDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +PVYA+ +E + F G +ES V+H Sbjct: 69 VVARKYKLPVYANEKTWKAMENQI---GKLDNGQKFVFPMETVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|309806944|ref|ZP_07700927.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b] gi|312872022|ref|ZP_07732102.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1] gi|312875266|ref|ZP_07735275.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b] gi|308166668|gb|EFO68864.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b] gi|311089229|gb|EFQ47664.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b] gi|311092475|gb|EFQ50839.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1] Length = 429 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 88/427 (20%), Positives = 149/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDITFI 61 G+ IG M Y + ++ D G F + +D PD Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 62 MKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 K L A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKDSAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + + VG ++E V +H L+I++P I +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAAELNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKIAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 +K K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VKYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPNVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|325297860|ref|YP_004257777.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317413|gb|ADY35304.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 296 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ F+ LG G G N Y + I+ID GV + F D Sbjct: 27 KTMKIRFMSLG-SGSSG-NC----YYLATDTYSILIDAGVGIRS-----IKKTFKDYNL- 74 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 + L AI ITH H DH A+ +L ++PVY + G+ + + E++S + C Sbjct: 75 --NIQELKAILITHDHADHIKAVGNLAKKYNIPVYTTQEIHKGMQRSYCMTEKLSAEHTC 132 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + ++ + +G F++ V H + + I + D Sbjct: 133 LLYKET-PIQLGDFNVTCFEVPHDGTDNVGYFIEADNKTFAFLTDMG 178 >gi|309808331|ref|ZP_07702234.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|325912754|ref|ZP_08175134.1| hypothetical protein HMPREF0523_0638 [Lactobacillus iners UPII 60-B] gi|308168394|gb|EFO70509.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|325477968|gb|EGC81100.1| hypothetical protein HMPREF0523_0638 [Lactobacillus iners UPII 60-B] Length = 429 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 84/427 (19%), Positives = 148/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P + +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKLAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 ++ K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VQYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPSVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|47565468|ref|ZP_00236509.1| mRNA 3'-end processing factor, putative [Bacillus cereus G9241] gi|47557458|gb|EAL15785.1| mRNA 3'-end processing factor, putative [Bacillus cereus G9241] Length = 419 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 60/452 (13%), Positives = 140/452 (30%), Gaps = 72/452 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMK 63 + GG GE G + Y + I+ DCG++ +D P ++ V P Sbjct: 1 MRIEVWGGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF------ 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---EAKRVYE------- 112 L A+F++H HEDH L L + ++ + + L K Sbjct: 51 ----LDAVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPTYYEKWRNYNVTRGWN 106 Query: 113 ---------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 ++ + + + + + + ++ + ++ Sbjct: 107 VPYSDQNIKGLNYVYIDEISNPNEWIQITPSLRFQWGYSGHVLGAVWFLVDMSHTYVFYS 166 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD+ + + + +L I + D+ + + + +I + Sbjct: 167 GDYSAESNILQ------ANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCAEIERA 218 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAI 269 A + + R + I+ + G + +++ + Sbjct: 219 AGQKGIALLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFEEMIVYKDWIKNNEELE 278 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 ++ K + + D+ G ++V++ + R+ L ++ E++++I Sbjct: 279 ELLESLKRNVIVMDDDSGTQYSFGIVVMSDANMQTKRAQLY------YEQIRRDERNSII 332 Query: 330 FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 F+ G+ RV E V H D+K M + P+ V Sbjct: 333 FTGHIARGSF--------AEKVLKERVDKECRMKRVPYKVHQSIRDVKEMLNALSPEHTV 384 Query: 390 AIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H ++ EG V + ++ Sbjct: 385 LVHALKEDTDRLQKKLSTEGYENVYSLTMERI 416 >gi|329919997|ref|ZP_08276875.1| hypothetical protein HMPREF9210_0915 [Lactobacillus iners SPIN 1401G] gi|328936768|gb|EGG33208.1| hypothetical protein HMPREF9210_0915 [Lactobacillus iners SPIN 1401G] Length = 429 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 85/427 (19%), Positives = 148/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDI-TF 60 G+ IG M Y + ++ D G F + +D PD + Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 61 ------IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 + A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKASAAYISHVHLDHSKALNLL--DESVKLYTGPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + VG ++E V +H L+I++P + +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAADLNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKLAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 +K K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VKYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPSVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|110636203|ref|YP_676411.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110287187|gb|ABG65246.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 452 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 66/445 (14%), Positives = 126/445 (28%), Gaps = 80/445 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + + + + I+IDCG+ F +L + + Sbjct: 2 LTLTSLGGAGTVTGS----KHLLTNGDRRILIDCGL-FQGLK----NLRELNWEPLPVAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 ++ A+ +THAH DH G L L +YA+ + E + Sbjct: 53 SSIDAVVLTHAHLDHSGYLPKLVRDGFKGRIYATAATRDVAELILKDSGFLNEKDAEYAN 112 Query: 120 ----------------CISFQAGDKVDVGAF----------SIESVRVNHSIPETMALVI 153 + +A + + F ++ H I + I Sbjct: 113 RKGFSKHKPALPLYGVRDAERAMEFFSIVPFDKAVQLPGGATLTFRHAGH-ILGAASAEI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I +GD + D + ++ +ST R + Sbjct: 172 ELAGRRIAFSGDLGR---YGDPMLPDPAPVPE-----ADYIVVESTYGNRIHDPADTTEV 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 I + G V++ F+ V R +S++ ++ G + + + I Sbjct: 224 LGEIVERTVKRGGTVVIPAFA--VGRAQSVLYHLWKLK----TAGRLANVPIYLDSPMAI 277 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGE------------------PRSALAQLSRG 315 D L L E + + S +A R Sbjct: 278 DATDLLHAHSGDHRLTHDECAAICKIATYTRDVEGSKAITASPWPKIVISASGMATGGRV 337 Query: 316 EMRN--VKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 K T++FS G + + + + + + +S H Sbjct: 338 LHHLKAFASDPKHTILFSGYQAAGTRGRAMVQGAREIRIHGQWVPVRAEIDDLSMLSAHA 397 Query: 372 YPNDLKRMYQWIR--PQVLVAIHGE 394 ++L R P + +HGE Sbjct: 398 DADELMRWLSGFERGPSRVFIVHGE 422 >gi|301053328|ref|YP_003791539.1| Zn-dependent hydrolase [Bacillus anthracis CI] gi|300375497|gb|ADK04401.1| Zn-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 420 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 8 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 53 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 54 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 113 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 114 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 173 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 174 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCTEIERAAGNKGI 225 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 226 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 286 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 339 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 340 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 391 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 EDTDRLQKKLSTAGYENVYSLTMERI 417 >gi|307610917|emb|CBX00534.1| metallo-beta lactamase family [Legionella pneumophila 130b] Length = 453 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 121/449 (26%), Gaps = 69/449 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + Y K I+IDCG+ F +L + + Sbjct: 1 MKLTFLGATETVTGS----KYLLTVDSKKILIDCGL-FQGYK----ELRLRNWAPLPVNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EAKR-- 109 +++ A+ ITHAH DH G L L +YA+ L EA+ Sbjct: 52 RDIDAVIITHAHIDHTGYLPLLIKNGFQGKIYATTGTKALCSILLPDSGHLQEEEARLAN 111 Query: 110 ----------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 RV+ S E R H I + I Sbjct: 112 KYGFSKHRPALPLYTEQEARVALNYFETIDFDTPHSLFNVLSFEFHRAGH-IVGAAMVKI 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK-G 212 ++ G++V TGD D + L+ +ST R Sbjct: 171 KTKKGSMVFTGDLG--------RPHDPVMKAPSVIQETDYLVMESTYGDRLHDATDPLPQ 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR-VVSVAIDV 271 I + I +K ++ + I ++ G + L + A + Sbjct: 223 IGEVINRTIKRGGSVIIPAFAVGRAQSLLYFIYELKRKGEIPKEIPVFLDSPMAINATKL 282 Query: 272 GIIKKDQLFLSDESFG---------LYPREQLIVIATGSQGEPR--SALAQLSRGEMRNV 320 K+ L++E P E + S +AQ R Sbjct: 283 LCTYKEDHHLNEEQCRGLCNVATYINTPEESKEIDRHKMPQIIIAASGMAQGGRILHHLK 342 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDL 376 A + N E + V V S H ++ Sbjct: 343 AFAPDPKNTLLFTGFQAGGTRGARMVNGEREVKIHGGLVPIRAQVVVMSSTSAHADYLEM 402 Query: 377 KRMYQWI--RPQVLVAIHGEPLHLVAHKE 403 + P+ + HGE + KE Sbjct: 403 LEWLKHFTHPPKKVFITHGELHSAQSLKE 431 >gi|168334828|ref|ZP_02692952.1| hypothetical protein Epulo_07398 [Epulopiscium sp. 'N.t. morphotype B'] Length = 424 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 115/359 (32%), Gaps = 42/359 (11%) Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK---------RVYER 113 + A+F++H H DH ++ L VP+Y LLE Sbjct: 78 ENTFEHKAVFLSHVHLDHSKIINYL--DPAVPLYTLYGTKSLLETLNINDDFLFPLHGAH 135 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + ++VG ++ + V+H L I +P I +TGD +L Sbjct: 136 EKNVREVVGVSDNAVIEVGKIRVKVMPVDHDAYGASGLYIETPDLTISYTGDIRL----H 191 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNA------MREGTCISEKGIKKNIYD-IMKNAKG 226 + C ++G L+ + + +SE + + I I N Sbjct: 192 GYRAEETIKFCEK-SKGCDLLLIEGVSISFQEVDEVPVGAMSEVELVEAIDALIKANPTK 250 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 + + +++ RI II+ + LK L Sbjct: 251 QITFNYYITNIERIMKIIEKNPRTVVLDAYYSYILKDATGFESLYYSCDDKNYGLDANKR 310 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE--VAIGH 344 Y ++ + QL+ E VK + + S A+P E A Sbjct: 311 ISYD-----ILLSDKGK----YFWQLTNKED--VKKLKSGGIYIHSNAMPLGEFDPAYAP 359 Query: 345 IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 +G+ + SGH YP DL + I+P++L+ IH + +K Sbjct: 360 FVESFAVKGIAF------ELMGSSGHAYPKDLMWIIDKIKPKLLIPIHSYHPERLLNKN 412 >gi|229155368|ref|ZP_04283478.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 4342] gi|228628083|gb|EEK84800.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 4342] Length = 415 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 139/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 3 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 48 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---EAKRVYER------------ 113 A+F++H HEDH L L + ++ + + L K Sbjct: 49 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPTYYEKWRNYNVTRGWNVPYSDQ 108 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 109 NIKDLNYVYVDEISNPNEWIQITPSLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 168 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + +L I + D+ + + + +I + + Sbjct: 169 SNILQ------ANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCAEIERATGQKGI 220 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + +++ + ++ Sbjct: 221 ALLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFEEMIVYKDWIKNNEELEELLESL 280 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 281 KRNVIVMDDDSGTQYSFGIVVMSDANMQTKRAQLY------YEQIRGDERNSIIFTGHIA 334 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V HP D+K M + P+ V +H Sbjct: 335 KGSF--------AEKVLKERVDKECRMKRVPYKVHPSIRDVKEMLNTLSPEHTVLVHALK 386 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ EG V + ++ Sbjct: 387 EDTDRLQKKLSTEGYENVYSLTMERI 412 >gi|114632910|ref|XP_508045.2| PREDICTED: DNA cross-link repair 1A protein [Pan troglodytes] Length = 1040 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 727 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 779 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + D Sbjct: 780 IVNGVKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSMERSLLAD--------- 829 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 830 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 889 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 890 IADVLGSKV---GMSREKYKTL-----------QCLNIPEINSLITTDMC----SSLVHL 931 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 932 LPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 989 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKIIPT 1015 >gi|30248056|ref|NP_840126.1| metallo-beta-lactamase superfamily protein [Nitrosomonas europaea ATCC 19718] gi|30179941|emb|CAD83936.1| Metallo-beta-lactamase superfamily [Nitrosomonas europaea ATCC 19718] Length = 468 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 69/473 (14%), Positives = 133/473 (28%), Gaps = 94/473 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE+ + L ++ ++DCG F G D + T I Sbjct: 1 MQITFLGGAGEVTGSCYLVE----TAEVRFLVDCG-MFQG----GRDADHKNYTAINFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-------------------- 104 + + + +THAH DH G L L PVY + L Sbjct: 52 ETIDFVLLTHAHVDHSGLLPRLAVLGFRGPVYMTRATADLLAIILKDSAHIQEKEAEWYT 111 Query: 105 ---LEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH-----------SIPETMA 150 L KR + + ++ + + H I + Sbjct: 112 KTALRNKRPSGHKNTPLYTVTQAEAFLRQIRGIDYDETCQPHPSVRCRYRDAGHIIGSAI 171 Query: 151 LVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + S IV +GD V D + L+ +ST R Sbjct: 172 IEVWLKSGSQRKKIVFSGDLG---QPGHPIVRDPTLIEE-----ADYLLVESTYGNRRHR 223 Query: 207 CISEKGIKKNIYDIMKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS-- 260 S + + + +I+ G ++V F+ V R + ++ + + R+ L Sbjct: 224 --SMQDTRDELVEIICRTFLQKHGNIIVPAFT--VGRTQDLLFLLADLQRQGCLNAMDVY 279 Query: 261 ----LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV-----------IATGSQGEP 305 + + D+ + + E L + + G Sbjct: 280 VDSPMALAATEITLNHSELLDKETIDTIQWHRQHNENLRIHFVQEVEDSIRLNHTRSGAI 339 Query: 306 RSALAQLSR----GEMRNVK-LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + + + + +++F+ G + + + Sbjct: 340 IISASGMCDAGRIKYHLKYNLPRPECSILFTGFQAAG--TLGRRLVDGNKSVRIFGEQIP 397 Query: 361 AECPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 +H S H DL + P +HGEP + E+ + Sbjct: 398 VRASIHTVGGLSAHADQQDLLDWLKGFSRPPLKTFIVHGEPGNAEVFAEVVRK 450 >gi|52143669|ref|YP_083159.1| zinc-dependent hydrolase [Bacillus cereus E33L] gi|51977138|gb|AAU18688.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus cereus E33L] Length = 436 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 138/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 24 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 69 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R + Sbjct: 70 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVMQGWNVPYNDQ 129 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 130 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 189 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 190 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCTEIERVAGNKGV 241 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + II + G + + + ++ Sbjct: 242 ALLPLPPLGRAQDIILYLYEKYKEFPIIVDQEILDGFDEMFVYKDWIKNNEELEELMESL 301 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 302 KRNVIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 355 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 356 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 408 EDTDRLQKKLSTAGYENVYSLTMERI 433 >gi|254444557|ref|ZP_05058033.1| RNA-metabolising metallo-beta-lactamase family [Verrucomicrobiae bacterium DG1235] gi|198258865|gb|EDY83173.1| RNA-metabolising metallo-beta-lactamase family [Verrucomicrobiae bacterium DG1235] Length = 453 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 123/430 (28%), Gaps = 65/430 (15%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G IG N L G + ++D G+ + G+ V P+ I + + + +T Sbjct: 10 GGIGSNSLLVEAGEFN----FVVDAGL---HPKMVGMAAV-PEFEHIGDRQ--IDFVIVT 59 Query: 75 HAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR----------VYERVSKKIPCISF 123 H H DH G+L L V+ S + L+E E+ + P + Sbjct: 60 HCHLDHIGSLPVLLQKHPKARVFMSLPSQMLVERMLHNSCNVMKRQKEEKRIPEYPLFTH 119 Query: 124 QAGDKV--DVGA---------------FSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + +++ I + H + I ++ TGD Sbjct: 120 EDIEQIADRFEPLKYKTPLSLTKNGETIEITLFQAGH-VAGAGGFQIDHAGKSVFFTGDI 178 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 D V + + R + I + + I + +G Sbjct: 179 LFD----DQRVIGGARFPHARKFDAMVIETTRGETERPEGKSRDSEITRLLETIRETIRG 234 Query: 227 CVLVTTFSSSVSRIRS---IIDIAEQIGRKIVL------LGSSLKRVVSVAIDVGIIKKD 277 V ++ R++ +I+ A + GR LG + + Sbjct: 235 GGSVLIPVFALGRMQELLSLINAARKDGRLPRCPVFGAGLGLDIADYFDQITKRTQLINY 294 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK---------DTV 328 ++ E P +L + + + + +LA V Sbjct: 295 TRKVTKELRLKRPPRKLTPGKEPPEPGIFILSSGMLVERTPSYQLASTLLAHTRNAICFV 354 Query: 329 IFSSRAIPGN---EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 + PG E G + +SGH ++ +P Sbjct: 355 GYCDPDTPGGKLLETRPGRTF-LFEVLDYQCPVLAKVERFEMSGHADREEILEFALAAKP 413 Query: 386 QVLVAIHGEP 395 + +V HG+P Sbjct: 414 ETIVLTHGDP 423 >gi|95768245|gb|ABF57340.1| cleavage and polyadenylation specific factor 3 [Bos taurus] Length = 114 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDI 58 ++++L+ PLG E+G + + + + IM+DCG+ + + P +DL+ P Sbjct: 8 ESDQLLIRPLGAGQEVGRSCIILEF----KGRKIMLDCGIHPGLEGMDALPYIDLIDP-- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE 112 + + I+H H DH GAL + + + Sbjct: 62 -------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 110 >gi|255513971|gb|EET90235.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 453 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 103/262 (39%), Gaps = 36/262 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G E+G + + G+ + I++D G+ ++ G ++ P+IT + Sbjct: 22 MKVSFY--GAAEEVGRSCLMVSTGNAN----ILLDAGLGN-VNEQEGSEMRMPEIT--DE 72 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ AI +THAH DH + ++ VYA+ + L++ + K I+ Sbjct: 73 TLGSIDAIVVTHAHLDHCCFVAHAYARGFSGKVYATKPTVELMKLQVADYVRISKPKEIT 132 Query: 123 FQ-------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + +E + H I + + + ++++TGD L Sbjct: 133 GKVLRKLSGSYIYSEYRKPIFIKGVKVEFINAGH-ILGSAMIRLSYGGKSLLYTGDMNL- 190 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTN-AMREGTCISEKGIKKNIYDIMKN--AKG 226 +++ + D + + A L+ +ST + E + I + G Sbjct: 191 QSSLVLNGADMNGISA------DTLIMESTYGGDADVFGSRETRAAGMVKSINETILQGG 244 Query: 227 CVLVTTFSSSVSRIRSIIDIAE 248 V++ +F + R + ++ + Sbjct: 245 KVIIPSFG--IGRSQEVLMLLH 264 >gi|169598186|ref|XP_001792516.1| hypothetical protein SNOG_01891 [Phaeosphaeria nodorum SN15] gi|111068983|gb|EAT90103.1| hypothetical protein SNOG_01891 [Phaeosphaeria nodorum SN15] Length = 833 Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 34/194 (17%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++EL+FL LGG E+G + + Y K +M+D G+ + L P Sbjct: 21 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAYEGL----SAMPFYD--E 70 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRV---------- 110 + + + I+H H DH +L + + + V+ + + + Sbjct: 71 FDLSTVDVLLISHFHVDHAASLPYVLAKTNFKGRVFMTHPTKAIYKWLIQDSVRVGNMSS 130 Query: 111 ----------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 P I V I H + ++ Sbjct: 131 SSETKIQMYTEADHLNTFPMIEAIDFYTTHTVSGVRITPYPAGH-VLGAAMFLMEIAGLK 189 Query: 160 IVHTGDWKLDDDAI 173 I+ TGD+ +DD Sbjct: 190 ILFTGDYSREDDRH 203 >gi|167840577|ref|ZP_02467261.1| metallo-beta-lactamase family protein [Burkholderia thailandensis MSMB43] Length = 459 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 80/280 (28%), Gaps = 54/280 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLEHAGTR----VLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L PVY + L E + Sbjct: 52 GSIAAVVLTHAHLDHSGYLPVLVREGFRGPVYCTHGTAALSEIMLMDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTADDAQRALERLAPRDFDAPTALAGGLHFRLLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ + L+ +ST R E Sbjct: 171 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPETE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 223 LADVFAKTFARG-GVVVMPCFT--VGRAQEILHYIAQLKK 259 >gi|206974962|ref|ZP_03235877.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217959276|ref|YP_002337824.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|206746981|gb|EDZ58373.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217064080|gb|ACJ78330.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] Length = 419 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 62/446 (13%), Positives = 139/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ KD P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYKDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---KRVYERVSKKIP------ 119 A+F++H HEDH L L + ++ + + L A K +++ Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWHVPYTDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + V + + + + ++ + ++GD+ + Sbjct: 113 NVKDLNYVYIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L + I + D+ + I + +I + + Sbjct: 173 SNIL------RANLPEKLHGDIKVAIVDAAY--HTDDVSQHERINELCTEIERAVGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 225 TLLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFQQMFAYKDWIKNNEELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDSGTQHSYGIVVMSDANMQTKRAQLY------YEQLRHDERNSIIFTGHIA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ RV E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSIRDVKEMLNTLSPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|71906631|ref|YP_284218.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Dechloromonas aromatica RCB] gi|71846252|gb|AAZ45748.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Dechloromonas aromatica RCB] Length = 470 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 69/451 (15%), Positives = 134/451 (29%), Gaps = 84/451 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG GE+ + L G ++DCG+ + + + F + + + Sbjct: 6 LGAAGEVTGSCTLVETG----DIRFLVDCGMFQGGPEARQKNQRALNFGF---DVREIDF 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------------- 109 + +THAH DH G L L P+YA+P I LLE Sbjct: 59 VLLTHAHIDHSGLLPRLSMLGYRGPIYATPATIDLLEVLLPDSAHIQEKESEWQLRNRHR 118 Query: 110 ---VYERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALVIR 154 ++ + + + S+ H + V+ Sbjct: 119 RGKGERGIAPPLYTVEQALASLKLLQPVSYGESLQPAESVSVRFHDAGHILGSAWLEVMV 178 Query: 155 SPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC--IS 209 S +V +GD + D +L D ++ +ST R + Sbjct: 179 SNEGKPRRLVFSGDLGMSDRPVLYDP-------EAPPAEADVVLIESTYGDRLHRSLAET 231 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA------EQIGRKIVLLGSSLKR 263 E I AKG +++ +F+ V R + I+ + +++ V + S + Sbjct: 232 EDEIVAAFERTKA-AKGNLIIPSFA--VGRTQEILYMLTGLVRRKRLSPLKVYVDSPMAN 288 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS---------ALAQLSR 314 + D + +++ + A +S L+ Sbjct: 289 SATRITLSHPNLLDPETRELIVWQQSHPDKMYIEAVADVERSKSLNEIRSGAVILSASGM 348 Query: 315 GEMRNVKLAEKDTVIFS--SRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVHV-- 367 E +K ++ + S S I G + A + + + ++ Sbjct: 349 CEAGRIKYHLRENLPRSECSVLIAGFQAAGTLGRRLVDGARLVHIFGQPVPVRARIYTVG 408 Query: 368 --SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 S H L + +P +HGE Sbjct: 409 GLSAHADQAALLKWLGGFHKQPGRTFVVHGE 439 >gi|167850795|ref|ZP_02476303.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei B7210] Length = 459 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L P+Y + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRRPIYCTHGTAALCEIMLIDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTTDDAKRTLERLAPRDFDAPSALAGDLHFRLLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D I+ + L+ +ST R + Sbjct: 171 CWRHTLLAFSGDLGRAHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPQTE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ G V++ F+ V R + I+ Q Sbjct: 223 LADVFAKTFARGGVVVMPCFT--VGRAQEILYYIAQ 256 >gi|165869562|ref|ZP_02214221.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167633183|ref|ZP_02391508.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167638735|ref|ZP_02397010.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170686120|ref|ZP_02877342.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|177650606|ref|ZP_02933573.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190566511|ref|ZP_03019429.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227815437|ref|YP_002815446.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|254683291|ref|ZP_05147152.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254723874|ref|ZP_05185660.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254734645|ref|ZP_05192357.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254741054|ref|ZP_05198742.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755297|ref|ZP_05207331.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|164715002|gb|EDR20520.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167513199|gb|EDR88570.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167531221|gb|EDR93899.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170669817|gb|EDT20558.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172083750|gb|EDT68810.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190562646|gb|EDV16613.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005164|gb|ACP14907.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] Length = 419 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 113 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQRERVNELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|325911973|ref|ZP_08174375.1| conserved domain protein [Lactobacillus iners UPII 143-D] gi|325476158|gb|EGC79322.1| conserved domain protein [Lactobacillus iners UPII 143-D] Length = 169 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Query: 466 HLSVNVLLD-NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLK 524 V +D I P + G Y + + + TT+ + ++ D Sbjct: 4 IFIAAVTIDRKKKKIVAEPLVSTRGFI-YIKESHDVMDGASDVIKTTISNNFNHKKFDWT 62 Query: 525 LLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 L++ + + L L K G++P+V + ++++ R Sbjct: 63 ELKQDLHTNLEKFLYKETGRRPVVLPIVMEVNQNR 97 >gi|328471817|gb|EGF42694.1| hypothetical protein VP10329_01640 [Vibrio parahaemolyticus 10329] Length = 449 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 82/256 (32%), Gaps = 35/256 (13%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I+IDCG+ KD G DI F +K + A+ Sbjct: 15 GGKHTVTGSC----HELKLPHGSILIDCGLFQGKDIHFGNRKASLDIEFPVKH---IKAL 67 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK-------------- 116 +THAH DH G L L + P+Y + L+ + Sbjct: 68 VLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELVPLMLEDGLKLQLGLNFHQRQQVLNV 127 Query: 117 -KIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 K + +G + H + IV +GD + +L Sbjct: 128 IKKQLRLHDYQQWLPLGKQCYLRFQPAGHILGSAYVEFKLPNNEIIVFSGDLGPSNTPLL 187 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTF 233 D L +ST +E I+ + + I D G +L+ F Sbjct: 188 PDPKPPKR--------ADHLFIESTYGNKEHEDIATRTERLNTIIDHALQDGGVILIPAF 239 Query: 234 SSSVSRIRSIIDIAEQ 249 S V R + ++ EQ Sbjct: 240 S--VGRTQELLFDIEQ 253 >gi|126273412|ref|XP_001377744.1| PREDICTED: similar to DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Monodelphis domestica] Length = 1043 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 117/326 (35%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S L+++K ++ Sbjct: 729 AYFLTHFHSDHYAG---LSKKFTFPVYCSKITSNLVKSKL----CVQEQYLHPLPMDTVC 781 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P I+HTGD++ D + + N Sbjct: 782 IVNDIKVVLLDANH-CPGAVMILFYLPNGTVILHTGDFRADPSM--------ERYSLLAN 832 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG---CVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + +I + LV + ++ + + + Sbjct: 833 QKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFESVTLAPRTLVVCGTYAIGKEKVFLA 892 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ S+ + + +++ ++ + L ++ + + Sbjct: 893 IADVLGSKV-----SMSQEKYKTLKCLELQEVNSLIT-TDWNSALVHLLPMMQI-NFKDL 945 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 ++ L + + S + + + + + + + Sbjct: 946 QNHLNKCGGKYDCILAFRP-TGWTHSEK------------FDSITDIVPQTKGNISIYGI 992 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ +++ Sbjct: 993 PYSEHSSYVEMKRFVQWLKPQKIIST 1018 >gi|82702786|ref|YP_412352.1| Beta-lactamase-like [Nitrosospira multiformis ATCC 25196] gi|82410851|gb|ABB74960.1| Beta-lactamase-like protein [Nitrosospira multiformis ATCC 25196] Length = 453 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 125/438 (28%), Gaps = 73/438 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L + + + I+IDCG+ F + + + K + A Sbjct: 7 LGATGTVTGSKYLLQHEAAN----ILIDCGL-FQGYKQL----RLRNWKALPFDAKKINA 57 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------------V 110 + +THAH DH G L L PVY + L E Sbjct: 58 VVLTHAHIDHSGYLPLLAKNGFTAPVYCTTATRDLCEILLPDSGQLQEEEAEYANRHGFS 117 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIESV-----------RVNHSIPETMALVIRSPVGN 159 + + + + + R + I + + + Sbjct: 118 KHKPAAPLYTRADAERCLRLFKPIDFDEEIAVADDLSLRLRPSGHILGAALACLNTARSS 177 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 IV +GD D G L+ +ST R + + ++ + Sbjct: 178 IVFSGDLG--------RQNDLIMPAPASVGGADYLVVESTYGNRSHNPSDPQDMLADVIN 229 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G V++ TF+ V R +S++ + + + L ++ + V + + Sbjct: 230 RTVQRGGVVVIPTFA--VGRAQSLLYYLYLLKK-AGTIPPELPVFLNSPMAVDATEIFRN 286 Query: 280 FLSDESFGLYPREQLI----VIATG-------SQGEPRSALAQLSRGE-----MRNVKLA 323 L + E + +I +G ++ P LA A Sbjct: 287 HLDEHRLSTAECEAMCRMSHIITSGLESKRLNNRPGPMVILAGSGMATGGRVVHHLKAFA 346 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHPYPNDLKRM 379 + + + + ++S H N++ Sbjct: 347 PDPRNTILFSGFQAGGTRGASMLQGAEQVKIHGQYVPIRAEIALIDNISAHADANEIMIW 406 Query: 380 YQWIR--PQVLVAIHGEP 395 + + PQ HGEP Sbjct: 407 LKQFKTAPQRTFVTHGEP 424 >gi|237717096|ref|ZP_04547577.1| beta-lactamase domain-containing protein [Bacteroides sp. D1] gi|262405865|ref|ZP_06082415.1| beta-lactamase domain-containing protein [Bacteroides sp. 2_1_22] gi|294647826|ref|ZP_06725378.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294806221|ref|ZP_06765068.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229443079|gb|EEO48870.1| beta-lactamase domain-containing protein [Bacteroides sp. D1] gi|262356740|gb|EEZ05830.1| beta-lactamase domain-containing protein [Bacteroides sp. 2_1_22] gi|292636734|gb|EFF55200.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294446477|gb|EFG15097.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|295085706|emb|CBK67229.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacteroides xylanisolvens XB1A] Length = 420 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 79/396 (19%), Positives = 136/396 (34%), Gaps = 33/396 (8%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G +IG + + I+ID G +LPG + N A+F Sbjct: 8 GADQIGGCITEI----STENCKILIDFG-----SNLPGCKKEELTEEQVKSIIGNADAVF 58 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-----------RVYERVSKKIPCI 121 TH H DH G LH L +V Y A ++ K + E + + Sbjct: 59 YTHYHSDHVG-LHHLIP-TNVLQYIGVGAKEVMLCKYDALRVHGDYSKQIEAIERMETYC 116 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + D G + V+HS + +I I+HTGD++ G Sbjct: 117 AAKRIDVSKKGKIFVTPYFVSHSAFDAYMFLIECEGKKILHTGDFRRHGYIGKGLFPTLK 176 Query: 182 SLCAIGNEGILALMCDSTNAMREGTC-ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + L+ + T R C ISE I+KNI ++ K V S+ + R+ Sbjct: 177 K----NVGEVDILITEGTMLGRSQECVISESEIQKNIIKALREHK-YVFALCSSTDLDRL 231 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 + ++ GR ++ + + G F + + + Sbjct: 232 ATFHAACKKTGRIFLVDEYQNRVLNVFTKYAGCKSDLFQFNAFKLINYRTVNVRNKLQKE 291 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR---AIPGNEVAIGHIKNRLVEQGVRVI 357 P + M ++ EK +I+S G + + N G R++ Sbjct: 292 GFLMPIRMSSGYLLKGMLDIYNDEKPWLIYSMWGGYTKEGKDYTNSDVINIRNLFGDRIL 351 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIH 392 + VH SGH LK + Q + P++ ++ IH Sbjct: 352 DGTMDG-VHTSGHADVETLKEVCQTVHPRIGVIPIH 386 >gi|323494414|ref|ZP_08099523.1| putative exonuclease [Vibrio brasiliensis LMG 20546] gi|323311344|gb|EGA64499.1| putative exonuclease [Vibrio brasiliensis LMG 20546] Length = 439 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 140/450 (31%), Gaps = 86/450 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + S + ++IDCG+ F D +++ FP K L + Sbjct: 7 GGKSTVTGSCHEFRH----SNQAVLIDCGL-FQGTDARSLEVDFP--------IKQLNGL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------------- 111 +TH+H DH G + L + + P++ S L Sbjct: 54 ILTHSHVDHIGRIPWLLAAGFNQPIFCSEATAELAPLMLEDSLKLQLGLAAKKAQRVLKR 113 Query: 112 -ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 +R+ P + D+ I H + ++ +V +GD + Sbjct: 114 IKRLLCPYPYNQWFLLDRNQPDGIQIRFQPAGHILGSAYVELMLPNKEVVVFSGDLGPTN 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVL 229 +L D + + L +ST + I+ + ++ K I D G +L Sbjct: 174 TPLL---PDPE-----SPQQADYLFIESTYGDSQHEDIATRSLRLKAIIDRSLEDGGTIL 225 Query: 230 VTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 + FS V R + + + I+L ++V + ++ L Sbjct: 226 IPAFS--VGRTQELLFDIEQLVFEHQIDTKIPIILDSPMAQKVTRSYRRFKELWGNEAKL 283 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT-------------- 327 ++ + + + R S GE V + Sbjct: 284 RLQNQRHPLAFEQCITVEDFRTHLRLVNRLKSTGEPAIVVASSGMCQGGRIMDYLKALLP 343 Query: 328 --------VIFSSRAIPGNEVAIG----HIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + G E+ G I + +E ++ S H +D Sbjct: 344 DPRTDVLLAGYQAEGTLGREIQAGCFEVEIDDEQIEVAAQIHTMSG-----YSAHADQSD 398 Query: 376 LKRMYQWI--RPQVLVAIHGEPLHLVAHKE 403 L R + I RP+ + IHGEP E Sbjct: 399 LIRFIEGIPSRPKTVHLIHGEPDTQTQFAE 428 >gi|33595943|ref|NP_883586.1| hypothetical protein BPP1276 [Bordetella parapertussis 12822] gi|33566022|emb|CAE36577.1| conserved hypothetical protein [Bordetella parapertussis] Length = 452 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 140/448 (31%), Gaps = 82/448 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G +++DCG+ F +L + + Sbjct: 2 LTLTCLGGAGTVTGSKHLLRHG----DTRLLVDCGL-FQGLK----NLRELNWQPLPVAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVYERV 114 ++ A+ +THAH DH G L L + ++A+P + L+ K Sbjct: 53 ADVDAVVLTHAHLDHCGYLPRLVAEGFRGRIHATPATRDVSELILLDSANLQEKDAEFAN 112 Query: 115 SKKIPCISFQAGDKVDV---------------------GAFSIESVRVNHSIPETMALVI 153 K + V G ++ R H I I Sbjct: 113 RKGYSRHAPALPLYRVVDAERALARFSDVALHRETALPGGATLTLRRAGH-ILGAATAQI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD +D ++ D D L+ +ST R Sbjct: 172 DIGGMRVVFSGDLGRYNDPVMHDPEDV--------RNADYLVIESTYGNRRHDAADPVEA 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLL--------- 257 + + G V++ F+ V R +++I + + L Sbjct: 224 LGAVIERTVLRGGTVVIPAFA--VGRAQTLIHALWKLRQAGRLHNVPVYLDSPMATSATE 281 Query: 258 --GSSLKRVVSVAIDVGIIKKDQLFLSDESFGL---YPREQLIVIATGSQGEPRSALAQL 312 A D ++ D R ++I+ L + Sbjct: 282 LLARHASEHKLSAQDCEAACAAVTYVRDVEGSKALSANRYPKVIISASGMATGGRVLHHM 341 Query: 313 --SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 + RN L F + G ++ G + R+ Q + V AE AE P+ +S H Sbjct: 342 AAFGADHRNTLLFAG----FQAAGTRGRKLLDGATETRIYGQWMPVRAEVAELPM-LSAH 396 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPL 396 ++L R + P+ + +HGEP Sbjct: 397 ADSDELMRWLAGFQEAPRRVFIVHGEPQ 424 >gi|161507958|ref|YP_001577922.1| hypothetical protein lhv_1747 [Lactobacillus helveticus DPC 4571] gi|160348947|gb|ABX27621.1| hypothetical protein lhv_1747 [Lactobacillus helveticus DPC 4571] Length = 431 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 149/447 (33%), Gaps = 83/447 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD--LPGVDLV 54 ++ G+ IG M Y ++ D G + P + + + Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELKLPDESYQTLIKNEL 59 Query: 55 FPDITFIMKERKNLMAI----------FITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 D+ + AI +I+H H DH A++ L +P+YA L Sbjct: 60 IGDVPNFYDPKITGKAIDTDRWEHAAAYISHLHLDHSKAMNLLAPE--IPLYAGSITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A S P I+ + + + VG +++ +H L++R+ Sbjct: 118 LPALNEKGDFLLPAAGHDKSYTRPIIAAEYKNPIQVGDITLKIYPSDHDAYGATGLIVRT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK---- 211 P I +TGD + + G D ++G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDWVREFMKASKGSDMLIIEGTGVSWPEEKHDENSEEF 232 Query: 212 -------GIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + + I + +N + + T+ ++V RI II S ++ Sbjct: 233 TGPKNEVELTEEIVHLQNENPERQITFNTYPTNVERILRIIAD-------------SPRK 279 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--- 320 VV A +IK + D + P+++ + E + +L + + + Sbjct: 280 VVLHAERAHLIK--ESLDEDYPYYYLPQDKKY---SDLNPELEVSYDELLKDNHKYLWQV 334 Query: 321 -----KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 KL E I S + + + A + + + + SGH Sbjct: 335 VTDYDKLLEGGLYIHSNAEPLGDFDPAYKPFVEQFAKNNIEF------KALRCSGHADEK 388 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAH 401 +LK + I+P +LV +H L + Sbjct: 389 ELKEIIAGIQPAILVPVHTLHPELEEN 415 >gi|167615167|ref|ZP_02383802.1| metallo-beta-lactamase family protein [Burkholderia thailandensis Bt4] gi|257141732|ref|ZP_05589994.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] Length = 459 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 79/280 (28%), Gaps = 54/280 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + +++DCG+ F L + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLVDCGL-FQGTK----KLRLCNWNPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L PVY + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPVYCTHGTAALSEIMLMDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + + + H I ++++ Sbjct: 112 RHGYSKHHPALPLYTTDDAQRALARLAPRDFDAPTTLAAGLNFRLLPAGH-ILGAASVIV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ + L+ +ST R E Sbjct: 171 CWRHTLLAFSGDLGRTHDPIMR--------APVPPVHADYLVVESTYGDRLHDTSDPETE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 223 LADVFAKTFARG-GVVVMPCFT--VGRAQEILYYIAQLKK 259 >gi|319790325|ref|YP_004151958.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] gi|317114827|gb|ADU97317.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] Length = 457 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 88/277 (31%), Gaps = 56/277 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L G ++DCG+ ++L + + P TF + Sbjct: 1 MRITFNGAARVVTGSCHLVEAGGVR----FLLDCGLFQGSEEL---EDLNPKFTF---DP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + ++H H DH G L L + +YA+ + + Sbjct: 51 SEVDFVILSHGHLDHCGRLPYLVKKGFNGKIYATSGTVDIAHLILLDAAQVQEEHVKTAN 110 Query: 106 EAKRVYERVSKKIPCISFQAGD------------KVDVGAFSIESVRVNHSIPETMALVI 153 + + K++ D VG H I + + + Sbjct: 111 RKRLREGKKPKELLYTVDDVFDTFSHFTRCEFNRWYSVGPVKFRFHDAGH-ILCSEFIEL 169 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 ++ +GD ++ D + ++ ++T A R E + Sbjct: 170 EVEGKRLLFSGDVGNRGKPLIR---DPE-----PPPKADVVLIETTYASRRHKSFEESVR 221 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 K+ + + G VL+ TF+ + R + I+ I + Sbjct: 222 EFKEAVLSTFERG-GSVLIPTFA--LERAQDILYILK 255 >gi|312873691|ref|ZP_07733737.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d] gi|311090791|gb|EFQ49189.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d] Length = 429 Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 88/427 (20%), Positives = 149/427 (34%), Gaps = 66/427 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-------PKDDLPGVDLVF----PDITFI 61 G+ IG M Y + ++ D G F + +D PD Sbjct: 14 GLTTIGGPMIEVAY----NDSHVLFDLGEVFKPDLELADESFQTLIDNQLIGDVPDFYDY 69 Query: 62 MKERKNLM-------AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--- 111 K L A +I+H H DH AL+ L V +Y P +L Sbjct: 70 HLTGKKLSDSHWKDSAAYISHVHLDHSKALNLL--DESVKLYTCPITASMLPVLNKDGNY 127 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P I+ + + VG ++E V +H L+I++P I +TGD Sbjct: 128 LLPAAGKPKNYTRPIIAAELNVPIKVGDITLEIVPSDHDAYGATGLIIKTPDKKIAYTGD 187 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDI 220 +L ++ G+ G L+ +ST SE+ I I Sbjct: 188 IRLHGYHPEW----VEAFMHKGH-GCDMLIIESTALSWPNENHSEEFTGPKNEDELIDRI 242 Query: 221 MKNA----KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIK 275 +K K + T+ S+V RI II + RK+VL + + +S+ +DV Sbjct: 243 VKYQIDNPKRQITFNTYISNVERILRII---KDSPRKVVLSAKRAEFLKLSIGVDVAYYY 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRA 334 + + ++A S+ L Q KL I S + Sbjct: 300 LPGEEIIPILRSDLEVDYNTLLADESEF-----LWQAVADFD---KLKSGSLYIHSNAEP 351 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 + + A + L + V V+ + SGH + L+++ + P VLV +H Sbjct: 352 LGSFDPAYQPFVDTLEQHQVEVVM------LRCSGHASASALEKIIRGFEPNVLVPVHSM 405 Query: 395 PLHLVAH 401 L+ + Sbjct: 406 HPELLEN 412 >gi|218963121|gb|ACL13296.1| YmfA [Bacillus methanolicus MGA3] Length = 60 Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 4/60 (6%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 KNE + + LGGVGEIG NM L + ++D G+ FP++++ G+D+V PDI+++ Sbjct: 5 KNESIKLIALGGVGEIGKNMYLVE----VDGEIFVVDAGLMFPENEMLGIDIVIPDISYL 60 >gi|167576990|ref|ZP_02369864.1| metallo-beta-lactamase family protein [Burkholderia thailandensis TXDOH] Length = 459 Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 79/280 (28%), Gaps = 54/280 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + +++DCG+ F L + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLVDCGL-FQGTK----KLRLCNWNPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L PVY + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGPVYCTHGTAALSEIMLMDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + + + H I ++++ Sbjct: 112 RHGYSKHHPALPLYTTDDAQRALARLAPRDFDAPTTLAAGLNFRLLPAGH-ILGAASVIV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ + L+ +ST R E Sbjct: 171 CWRHTLLAFSGDLGRTHDPIMR--------APVPPVHADYLVVESTYGDRLHDTSDPETE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 223 LADVFAKTFARG-GVVVMPCFT--VGRAQEILYYIAQLKK 259 >gi|298674648|ref|YP_003726398.1| RNA-metabolising metallo-beta-lactamase [Methanohalobium evestigatum Z-7303] gi|298287636|gb|ADI73602.1| RNA-metabolising metallo-beta-lactamase [Methanohalobium evestigatum Z-7303] Length = 412 Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 66/399 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + I+ID G+ + + + ++ Sbjct: 7 GGCREVGRSSVYL-------NDEILIDYGMKPGEIAQ-----------YPLNNLH-PKSV 47 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISF-- 123 +TH H DH GAL +L + ++ +P E K + Sbjct: 48 LVTHGHLDHCGALTNLIHD-NSEIFMTPPTADFTEMLAEDTLKIAENENIPPAYNLEDLK 106 Query: 124 ---------QAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAI 173 G + + + H IP + ++ I +I +TGD D + Sbjct: 107 YFMNRTNKVDTGMEFSTNGYKVHFYDAGH-IPGSSSVYIETKEGESICYTGDVNTIDTRL 165 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGCVLVT 231 L A L+ +ST + E +++ + G V++ Sbjct: 166 LYG--------ADVFPDADTLIIESTYFGEDHTPRKKLESEFIESLKSTIDIG-GSVIIP 216 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK---------RVVSVAIDVGIIKKDQLFLS 282 F+ + R I+ + + G + G L + + +D + Sbjct: 217 AFA--IGRTHEILMMLDSYGINAHVDGMGLDAYSIMKKYPDYIKNIKHLKKAFRDASVVK 274 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 + PR+ +++ T L L V K ++ + + G Sbjct: 275 GKKREKLPRDSSVIVTTAGMLNGGPVLQYL-----DKVYKDPKSKIMLTGYQVEGTNGRS 329 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQ 381 + +G+R + S H +LK++ + Sbjct: 330 AIENGFIENKGIRQKLQTEIEQYDFSAHCGDRELKQLVK 368 >gi|297588707|ref|ZP_06947350.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] gi|297574080|gb|EFH92801.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] Length = 539 Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 75/509 (14%), Positives = 142/509 (27%), Gaps = 92/509 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + + M+DCG+ +L + DI F Sbjct: 1 MKITFLGAAQEVTGSCYLVE----TEKHKFMVDCGLFQGSKELEQKNHD--DIDF----- 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYE 112 + + +THAH DH G + L+ P+Y + L E Sbjct: 50 NEVEFMLLTHAHIDHTGRIPLLYKNGFRKPIYCTKATKDLAEIMLMDSAKIQESDVEWEN 109 Query: 113 RVSKK-------IPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 R ++ + A + + + H + + +L Sbjct: 110 RKRQRSGKTLLTPLYTTIDAMSCISLFKGRFYDEVVKINEDIRVVFRDAGH-MLGSSSLE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I I+ +GD ++ IL + G L+ +ST R Sbjct: 169 IFITENGKTTKIIFSGDIGTSNNPILNNPEVLS--------GCDYLVMESTYGNRIHEPY 220 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 E + I I K + V S +V R + II + ++ V V Sbjct: 221 KES-VHSLIEIIEKVSSRGGTVIIPSFAVGRTQEIIYELNSY--YDYQIKDHYEKKVPVY 277 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 +D + + + + + + + + E + + E + + + V Sbjct: 278 VDSPMALEATKAFMKNTDLFNQKAKDYISSGDNVFEFENLHYVKNIDESKMLNNVKFPRV 337 Query: 329 IFSSRAIPGNEVAIGHI-KNRLVEQGVRVI-------------------------AEDAE 362 I SS + H+ N E+ V Sbjct: 338 IISSSGMATAGRVRHHLKHNLWDEKNAVVFVGYQAEGSLGRILLDGIDEVKLFGETIKVN 397 Query: 363 CPVH----VSGHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 ++ SGH N+L ++P+ + HGE L ++ Sbjct: 398 AEIYNLGGFSGHADQNNLMDFVDNMKVKPKKIFITHGENEGAETLSNLLKEKYNIEAVIP 457 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGF 445 I E+ D + Sbjct: 458 EIYSTEEFDAGNYNIEQEISTNRENNDLY 486 >gi|164686472|ref|ZP_02210500.1| hypothetical protein CLOBAR_00037 [Clostridium bartlettii DSM 16795] gi|164604483|gb|EDQ97948.1| hypothetical protein CLOBAR_00037 [Clostridium bartlettii DSM 16795] Length = 263 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 78/225 (34%), Gaps = 22/225 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N + Y I+ID G++ K G++ D + IF Sbjct: 8 GSGSSG-NCHVVSY----KDTGILIDAGLA-GKRITSGIEQ--ADFD-----IDKIQGIF 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH + L +P+YA+ ++ K K+ I F ++G Sbjct: 55 ITHEHSDHIKGAGIMSRKLDIPIYANFKTWCGMKDKI---GNIKEENMIVFDNDKTYELG 111 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEG 190 I + H + + I S + D + D+ + L + + Sbjct: 112 ELKIRPFSIPHDSEDAVGYNIYSDKEKMSIATDIGYITDNIRNNLKGSKLVVLESNYDPN 171 Query: 191 ILALMCDS----TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 +L + + M +G +S + ++++ +L+ Sbjct: 172 MLMMGSYTYALKKRVMSDGGHLSNEEAASFCTELVEGGTESILLA 216 >gi|323467147|gb|ADX70834.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus helveticus H10] Length = 431 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 149/447 (33%), Gaps = 83/447 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG------VSFPKDD--LPGVDLV 54 ++ G+ IG M Y ++ D G + P + + + Sbjct: 4 KDKTTVTFYNGLTTIGGPMIEVAYNKSH----VLFDLGEVYRPELKLPDESYQTLIKNEL 59 Query: 55 FPDITFIMKERKNLMAI----------FITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 D+ + AI +I+H H DH A++ L +P+YA L Sbjct: 60 IGDVPNFYDPKITGKAIDTDRWEHAAAYISHLHLDHSKAMNLLAPE--IPLYAGSITAHL 117 Query: 105 LEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 L A S P I+ + + + VG +++ +H L++R+ Sbjct: 118 LPALNEKGDFLLPAAGHDKSYTRPIIAAEYKNPIQVGDITLKIYPSDHDAYGATGLIVRT 177 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK---- 211 P I +TGD + + G D ++G L+ + T E Sbjct: 178 PDKQIAYTGDIR-----LHGYHPDWVREFMKASKGSDMLIIEGTGVSWPEEKHDENSEEF 232 Query: 212 -------GIKKNIYDIM-KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + + I + +N + + T+ ++V R+ II S ++ Sbjct: 233 TGPKNEVELTEEIVHLQNENPERQITFNTYPTNVERMLRIIAD-------------SPRK 279 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV--- 320 VV A +IK + D + P+++ + E + +L + + + Sbjct: 280 VVLHAERAHLIK--ESLDEDYPYYYLPQDKKY---SDLNPELEVSYDELLKDNHKYLWQV 334 Query: 321 -----KLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 KL E I S + + + A + + + + SGH Sbjct: 335 VTDYDKLLEGGLYIHSNAEPLGDFDPAYKPFVEQFAKNNIEF------KALRCSGHADEK 388 Query: 375 DLKRMYQWIRPQVLVAIHGEPLHLVAH 401 +LK + I+P +LV +H L + Sbjct: 389 ELKEIIAGIQPAILVPVHTLHPELEEN 415 >gi|196033463|ref|ZP_03100875.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|195993897|gb|EDX57853.1| metallo-beta-lactamase family protein [Bacillus cereus W] Length = 419 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 58/446 (13%), Positives = 139/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYSDQ 112 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 113 NIKDLNYVYVDEISNPNEWIQITPSLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCAEIERATGQKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + +++ + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFEEMIVYKDWIKNNEELEELLESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|319781204|ref|YP_004140680.1| hypothetical protein Mesci_1471 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167092|gb|ADV10630.1| hypothetical protein Mesci_1471 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 388 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 79/232 (34%), Gaps = 34/232 (14%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG GE G G + I++D G+ G D + ++ A Sbjct: 6 LGGFGEKGRTSLAVSSG----KDRILLDVGIKVGAS---GADY----YPALNGSVADIDA 54 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYERVSKKIPCI 121 +F++HAHEDH GAL L S P++ + G E + + Sbjct: 55 LFVSHAHEDHVGALSWLLSRGYAGPIFMTAETRDEAPATLAGYAEPEDFRRFPFPEDRIE 114 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F+ GD ++ G +I + R H + + + + ++ D D + + D Sbjct: 115 LFEPGDTLNSGNLTIRTGRSGH-VVGGVWFAVDDGESRVAYSADVVPDSNVFVMDTI--- 170 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 L+ D++ + + I + G L+ T Sbjct: 171 -------PHCDLLVLDASYGADPVPGAARA---REISQWVARHSGGCLLPTP 212 >gi|167573768|ref|ZP_02366642.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis C6786] Length = 459 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 79/280 (28%), Gaps = 54/280 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++IDCG+ F L + + + Sbjct: 1 MKLTFLGATETVTGSKYLLE----DAGTRVLIDCGL-FQGTK----KLRLRNWSPLPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L VY + L E + Sbjct: 52 DSIDAVVLTHAHLDHSGYLPVLVREGFRGQVYCTHGTAELAEIMLMDSARLLEEEADFAN 111 Query: 117 KIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMALVI 153 + + G + H I ++V+ Sbjct: 112 RHGYSKHHPALPLYTVDDAQRALQRLAPREFDAPTPLAGNLHFRFLPAGH-ILGAASVVV 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI-SEKG 212 + +GD D I+ + L+ +ST R E Sbjct: 171 CWRHTLLAFSGDLGRPHDPIMR--------APVPPVHADYLVVESTYGDRLHDASDPEAE 222 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + G V++ F+ V R + I+ Q+ + Sbjct: 223 LADVFSKTFARG-GVVVMPCFT--VGRAQEILHYIAQLKK 259 >gi|229524785|ref|ZP_04414190.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae bv. albensis VL426] gi|229338366|gb|EEO03383.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae bv. albensis VL426] Length = 438 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 131/441 (29%), Gaps = 86/441 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + + + ++IDCG+ F + V+ ++ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGL-FQGADERPLAVEFAL----------GHVD 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------------- 111 A+ +THAH DH G L L + P+Y + L+ Sbjct: 52 ALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 112 ---ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWK 167 R+ + + A G+ + H I + + IR P +V +GD Sbjct: 112 TEVRRLLRVQDYQKWFAVQPKRAGSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDLG 170 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 171 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTD 220 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 G +L+ FS + R + ++ EQ I+L +RV + Sbjct: 221 GGAILIPAFS--IGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWG 278 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR--- 333 + + + + + R S GE V A Sbjct: 279 QEAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 338 Query: 334 -----------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPND 375 + G E +G E + +H S H D Sbjct: 339 KALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKAD 398 Query: 376 LKRMYQWI--RPQVLVAIHGE 394 L R I +P+ + IHGE Sbjct: 399 LLRFIAGIPEKPKQVHLIHGE 419 >gi|261367904|ref|ZP_05980787.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282570716|gb|EFB76251.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 540 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 78/529 (14%), Positives = 158/529 (29%), Gaps = 104/529 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + ++ +++DCG+ +D DL + T+ Sbjct: 1 MKLTFLGAAREVTGSCTQLE----AAGHRLLVDCGMEQGRDVYENADLPYAPGTY----- 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 A+ +THAH DH G + L+ P+Y++ + L Sbjct: 52 ---EALLLTHAHIDHSGQIPYLYKNGYRGPIYSTDATMDLCGIMLRDSAHIQEQEAEWKN 108 Query: 112 -----------------ERVSKKIPCISFQAGDKVDV------GAFSIESVRVNHSIPET 148 E K + G + V H + + Sbjct: 109 RKAQRSGAAMVEPDYTVEDAEKVMQQFVPCPYGAWQTLFDEEGGKIEVLFTDVGH-LLGS 167 Query: 149 MALVIRSPV-----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 ++ IR IV +GD ++ D L+ +ST R Sbjct: 168 ASISIRITEPERQPEIIVFSGDIGNTHQPLIKDPA--------IPPHADYLVMESTYGDR 219 Query: 204 EGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS- 260 + + + + G V++ +F+ V R + ++ QI + + G Sbjct: 220 SHGPRPDYLGELTEVLQTTFDRG-GNVVIPSFA--VGRTQELLYFIRQIKEEGRIHGHDD 276 Query: 261 ---------LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA--- 308 + ++ + + D+ ++ G P + + ++ E + Sbjct: 277 FPVFVDSPLASKSTTIFRENFMECYDEEAMAIVQRGENPLWFPGLCVSETKEESMAINGD 336 Query: 309 -----------LAQLSRGEMRNVKLA---EKDTVIFSSRAIP---GNEVAIGHIKNRLVE 351 + R ++K + T++F P GN + G + +L Sbjct: 337 PTPKVIISASGMCDAGRIRH-HLKYNLWRPECTILFVGFQSPGTLGNVLLGGATEVKLFG 395 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEG 409 ++V A +SGH + L +P+ + HGE + H LQE Sbjct: 396 DEIQVKAH-IHRLSGLSGHADQDGLANWLHAFDEKPKFVFVNHGEDA-VADHWAHRLQEE 453 Query: 410 IACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKR 458 NG + + + EV + + + R Sbjct: 454 GYEAEAPYNGSIWIVGDGRVACA-EVGNTKKIVKTPGVATVRSSAAYDR 501 >gi|229127115|ref|ZP_04256112.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-Cer4] gi|228656231|gb|EEL12072.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-Cer4] Length = 417 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 55/445 (12%), Positives = 132/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ + L A Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REAVPFLDA 51 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 52 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVLQGWNLPYSDQH 111 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ V + + + + ++ + ++GD+ + Sbjct: 112 IKDLNYVCIDEISNPNKWVQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 171 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + + +I + + + Sbjct: 172 NIL------RANLPEKLGHNIKIAIVDAAY--HTDDVSQNERVNELCAEIERVMQNKGIA 223 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 224 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEEFKWIMESLK 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 284 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 337 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V E V H D+K M + P+ V +H Sbjct: 338 GSF--------AEKVMKEHVGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 389 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 390 DTDRLQQKLSTAGYENVYSLAMERI 414 >gi|229132620|ref|ZP_04261468.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-ST196] gi|228650852|gb|EEL06839.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-ST196] Length = 417 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 58/418 (13%), Positives = 133/418 (31%), Gaps = 72/418 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A Sbjct: 51 AVFLSHIHEDHTMGLPLLTKYGYKKKIWTTRYTKEQLPAYFEKWGNYNLSKGWNLPYNDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 NIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ ++ + + +I + A+ Sbjct: 171 SNIL------RANLPEDLRSDIKIAIVDAAY--HTDDVSQKERVDELCAEIERVAQNKGT 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 S+ R + I+ + G + + + + V Sbjct: 223 ALLPLPSLGRAQDIVLYLYERYKELPIIVDKEIFAGFEEMFIYKDWLKNNEKFERVVEGL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ + ++V++ + R+ L ++ E++++IF+ Sbjct: 283 KRNIIVMDKDICMQNSYGIVVMSDANMQTKRAQLY------YEQLRHEERNSIIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 G+ RV E V H +D+K M + P+ V +H Sbjct: 337 KGSF--------AEKVLKERVGKECRVKRVPYKVHQSISDVKEMLNTLLPEHTVLVHA 386 >gi|124268677|ref|YP_001022681.1| metallo-beta-lactamase family protein [Methylibium petroleiphilum PM1] gi|124261452|gb|ABM96446.1| metallo-beta-lactamase family protein [Methylibium petroleiphilum PM1] Length = 468 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 78/454 (17%), Positives = 138/454 (30%), Gaps = 94/454 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LG + + L G +++DCG+ F P + Sbjct: 17 RMKLTFLGAADTVTGSKHLVEMGGAR----VLLDCGL-FQGYKTLRERNWAP----LAVP 67 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RVS 115 + A+ ++HAH DH G L L PVYAS L E A E R + Sbjct: 68 PAQIDAVVLSHAHLDHCGWLPVLVRQGFKGPVYASAATRDLAEVLLLDSAHLQEEDARRA 127 Query: 116 KKIPCISFQA----------------------GDKVDVGAFSIESVRVNHSIPETMALVI 153 + G V VG IE H + M++ + Sbjct: 128 NRGGWSRHAPALPLYGVADAKRAIARIGVAPAGRGVRVGDARIEFTPAGH-LLGAMSVSV 186 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 R+ +V +GD DD ++ + L+ +ST R + Sbjct: 187 RANGRTLVFSGDLGRGDDLLMPA---PGRVAQ-----ADVLLIESTYGNRCHPRD---DV 235 Query: 214 KKNIYDIMKNA---KGCVLVTTFSSSVSRIRS---IIDIAEQIGRKIVLLG--------- 258 + ++ +I++ G VL+ +F+ V R ++ ++ + G L Sbjct: 236 QAHLGEIVRATVRRGGSVLLPSFA--VGRAQALLLVLQRLKAAGEIPADLPLFLDSPMAS 293 Query: 259 ---------SSLKRVVSVAIDVGIIKKDQLFLSDESFG----LYPREQLIVIATG--SQG 303 L R+ + + D ++ ++I+ A+G + G Sbjct: 294 TATALYQRHRKLLRI--TPREAATLTDDVTLVAGPEASERLTRQRWPKVIISASGMATGG 351 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 L L+ ++ A+ G + I V V Sbjct: 352 RVLHHLKALAPNPRNHIVFPGFQVGGTRGAALVGGAREV-KIHGEYVAVKATVSH----- 405 Query: 364 PVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 SGH + L + P+ +HGEP Sbjct: 406 LEGFSGHADADGLMEWLRGFETPPERCFVVHGEP 439 >gi|328853485|gb|EGG02623.1| hypothetical protein MELLADRAFT_38438 [Melampsora larici-populina 98AG31] Length = 672 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 47/266 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDITFIMKERKN 67 LG E+G + + Y S + ++ D GV + P +D + D + Sbjct: 2 LGAGQEVGRSCCVIEYKSVT----VVCDTGVHPAYTGMAALPFIDEI--DWS-------T 48 Query: 68 LMAIFITHAHEDHYGALHDLW-----SFLHVPVYASPFAIGLLEAKR------------- 109 + AI ITH H DH +L + + V+ + + Sbjct: 49 VDAILITHFHLDHAASLTYIMENTNFKEGNGKVFMTHPTKAVYRFLMQDFVRMSTIGTDG 108 Query: 110 ----VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + ++ +G+ S H + +I +++TGD Sbjct: 109 ELFNEEQMTLSYESINAIDYHQEISLGSLRFTSYPAGH-VLGAAMFLIEIAGIRVLYTGD 167 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNA 224 + ++D L + NE ++C+ST ++ EK + + ++ Sbjct: 168 YSTEEDRHL-----IPAKVPNWNEKPDVMICESTYGVQSLEPRPEKEERFTALVQMILKR 222 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + ++ I ++ Sbjct: 223 GGRVLMPVFA--LGRAQELLLILDEY 246 >gi|119621395|gb|EAX00990.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform CRA_b [Homo sapiens] Length = 647 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 52/428 (12%), Positives = 118/428 (27%), Gaps = 61/428 (14%) Query: 36 MIDCGVSFPKDDL---PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-- 90 M+DCG+ + + P +DL+ P + + I+H H DH GAL Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTS 51 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGA 133 + + + I + + +V Sbjct: 52 FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAG 111 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 H + +I +++TGD+ +D L I N Sbjct: 112 IKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDI 163 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--- 250 L+ +ST E+ + + ++ R + ++ I ++ Sbjct: 164 LIIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN 222 Query: 251 ----GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE- 304 + SSL + + D++ + + + + + + Sbjct: 223 HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDD 282 Query: 305 ---------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGV 354 P + LSR + +++ VI + + G I + Sbjct: 283 IGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSG 342 Query: 355 R-VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIAC 412 + + + + + S H + ++P ++ +HGE L + Sbjct: 343 QKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDND 402 Query: 413 VPPVRNGK 420 + Sbjct: 403 EVHIEVHN 410 >gi|217075847|gb|ACJ86283.1| unknown [Medicago truncatula] Length = 230 Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 73/241 (30%), Gaps = 40/241 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L LG E+G + + + K IM DCG+ D +PD I Sbjct: 1 MTIEVLVLGAGQEVGKSCVIV----KINGKRIMFDCGMRMRHTDH----SRYPDFKKISD 52 Query: 64 E---RKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKI 118 L I ITH H DH GAL PVY + L R Sbjct: 53 SGNFNDALDCIIITHFHLDHVGALAYFTEVCGYSGPVYMTYPIKALSPLMLEDYRKVMVD 112 Query: 119 PCISFQAGDKVDVGAFSIESVRV------------------NHSIPETMALVIRSPVGNI 160 + + + + V + ++ + Sbjct: 113 RRGEEEQFTSDHIAECMKKVIAVDLKQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEM 172 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIY 218 V+TGD+ + D LG I + L+ +ST A R+ E+ K ++ Sbjct: 173 VYTGDYNMTPDRHLGA-------AQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVH 225 Query: 219 D 219 Sbjct: 226 K 226 >gi|114576020|ref|XP_001154439.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114576022|ref|XP_001154493.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] Length = 647 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 52/428 (12%), Positives = 118/428 (27%), Gaps = 61/428 (14%) Query: 36 MIDCGVSFPKDDL---PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-- 90 M+DCG+ + + P +DL+ P + + I+H H DH GAL Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTS 51 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGA 133 + + + I + + +V Sbjct: 52 FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAG 111 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 H + +I +++TGD+ +D L I N Sbjct: 112 IKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDI 163 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--- 250 L+ +ST E+ + + ++ R + ++ I ++ Sbjct: 164 LIIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN 222 Query: 251 ----GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE- 304 + SSL + + D++ + + + + + + Sbjct: 223 HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDD 282 Query: 305 ---------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN-EVAIGHIKNRLVEQGV 354 P + LSR + +++ VI + + G I + Sbjct: 283 IGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSG 342 Query: 355 R-VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIAC 412 + + + + + S H + ++P ++ +HGE L + Sbjct: 343 QKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDND 402 Query: 413 VPPVRNGK 420 + Sbjct: 403 EVHIEVHN 410 >gi|28897012|ref|NP_796617.1| hypothetical protein VP0238 [Vibrio parahaemolyticus RIMD 2210633] gi|260362294|ref|ZP_05775261.1| RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus K5030] gi|260897609|ref|ZP_05906105.1| putative RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus Peru-466] gi|260899539|ref|ZP_05907934.1| RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus AQ4037] gi|28805220|dbj|BAC58501.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087525|gb|EFO37220.1| putative RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus Peru-466] gi|308108805|gb|EFO46345.1| RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus AQ4037] gi|308111334|gb|EFO48874.1| RNA-metabolizing metallo-beta-lactamase [Vibrio parahaemolyticus K5030] Length = 449 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 82/256 (32%), Gaps = 35/256 (13%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I+IDCG+ KD G DI F +K + A+ Sbjct: 15 GGKHTVTGSC----HELKLPHGSILIDCGLFQGKDIHFGNRRASLDIEFPVKH---IKAL 67 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK-------------- 116 +THAH DH G L L + P+Y + L+ + Sbjct: 68 VLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELVPLMLEDGLKLQLGLNYHQRQQVLNV 127 Query: 117 -KIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 K + +G + H + IV +GD + +L Sbjct: 128 IKKQLKPHDYQQWLPLGKQCYLRFQHGGHILGSAYVEFKLPNHEIIVFSGDLGPSNTPLL 187 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTF 233 D L +ST +E I+ + + I D G +L+ F Sbjct: 188 PDPKPPKR--------ADYLFIESTYGNKEHEDIATRPERLNAIIDHALQDGGVILIPAF 239 Query: 234 SSSVSRIRSIIDIAEQ 249 S V R + ++ EQ Sbjct: 240 S--VGRTQELLFDIEQ 253 >gi|56460647|ref|YP_155928.1| beta-lactamase fold exonuclease [Idiomarina loihiensis L2TR] gi|56179657|gb|AAV82379.1| Predicted exonuclease of the beta-lactamase fold [Idiomarina loihiensis L2TR] Length = 452 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 61/472 (12%), Positives = 136/472 (28%), Gaps = 73/472 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG + + L + I+IDCG+ F + + Sbjct: 1 MRVVFLGGAETVTGSKYLVE----TESTRILIDCGL-FQGYKWLRRR----NWQPLPMGI 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + +THAH DH G + L+ PV+A GL Sbjct: 52 NQVDGVVLTHAHLDHSGFVPVLYKEGFRGPVFAHHATSGLCDILWADSGRIQEEDAKYLG 111 Query: 106 EAKRVYERVSKKIPCISF-----------QAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + K + + + + + ++G + H I +++I Sbjct: 112 KHKLSRHEKPEPLYDEATAKSAIRLLQGVEFHQQFEIGDIKVTLQPAGH-ILGASSIIIE 170 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 + + +GD D + L+ +ST R + Sbjct: 171 AEGKRVGFSGDIG--------RPQDIMMYPPEPLPDLDLLLLESTYGNRLHAKTENAEEQ 222 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVV-- 265 + + + + G +L+ +FS V R + + + ++ ++ + L S + V Sbjct: 223 LEEVVNETAQSGGVLLIPSFS--VGRAQLLQYLLVKLMDEGRVPKQPIYLDSPMAINVSG 280 Query: 266 --SVAIDVGIIKKDQLFLSDESFGLYPR-EQLIVIATGSQGEPR---SALAQLSRGEMRN 319 + + + ++ IA+ S S +A R Sbjct: 281 LYQRFHSLHKLTDSDCSRTFARVEYTRSVDESKAIASQSGPHIIIAGSGMATGGRILHHF 340 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPND 375 + + + + + + +SGH + Sbjct: 341 KRWLSDHRATVLFSGHQAGGTRGAKMLQGVESIKLHGQWLPVKARIRSLEGLSGHADYQE 400 Query: 376 LKRMYQW--IRPQVLV-AIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + + ++P + +HGE L ++ +Q V + L Sbjct: 401 IADWLEQSSLKPNTPIQLVHGELDALETFRDYLMQNTTYNVDVADYQGVYHL 452 >gi|259148260|emb|CAY81507.1| Ysh1p [Saccharomyces cerevisiae EC1118] Length = 779 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 75/276 (27%), Gaps = 46/276 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 F LGG E+G + + Y K +M+D G+ L P Sbjct: 5 NTTTFKFFSLGGSNEVGRSCHILQY----KGKTVMLDAGIHPAYQGL----ASLPFYD-- 54 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLLEAKRV--------- 110 + + + I+H H DH +L + + V+ + + Sbjct: 55 EFDLSKVDILLISHFHLDHAASLPYVMQRTNFEGRVFMTHPTKAIYRWLLRDFVRVTSIG 114 Query: 111 ----------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + V + VDV + H + I Sbjct: 115 SSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHSTVDVNGIKFTAFHAGH-VLGAAMFQIE 173 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 ++ TGD+ + D L + L+ +ST + + Sbjct: 174 IAGLRVLFTGDYSREVDRHLNS-------AEVPPLSSNVLIVESTFGTATHEPRLNRE-R 225 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K I V ++ R + I+ I ++ Sbjct: 226 KLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEY 261 >gi|6323307|ref|NP_013379.1| Ysh1p [Saccharomyces cerevisiae S288c] gi|74644951|sp|Q06224|YSH1_YEAST RecName: Full=Endoribonuclease YSH1; AltName: Full=Yeast 73 kDa homolog 1; AltName: Full=mRNA 3'-end-processing protein YSH1 gi|577190|gb|AAB67367.1| Ysh1p: subunit of polyadenylation factor I (PF I) [Saccharomyces cerevisiae] gi|151940984|gb|EDN59365.1| cleavage factor II (CF II) component [Saccharomyces cerevisiae YJM789] gi|190405336|gb|EDV08603.1| hypothetical protein SCRG_04228 [Saccharomyces cerevisiae RM11-1a] gi|256269831|gb|EEU05091.1| Ysh1p [Saccharomyces cerevisiae JAY291] gi|285813694|tpg|DAA09590.1| TPA: Ysh1p [Saccharomyces cerevisiae S288c] gi|323332373|gb|EGA73782.1| Ysh1p [Saccharomyces cerevisiae AWRI796] Length = 779 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 74/276 (26%), Gaps = 46/276 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 F LGG E+G + + Y K +M+D G+ L P Sbjct: 5 NTTTFKFFSLGGSNEVGRSCHILQY----KGKTVMLDAGIHPAYQGL----ASLPFYD-- 54 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRV--------- 110 + + + I+H H DH +L + V+ + + Sbjct: 55 EFDLSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIG 114 Query: 111 ----------------YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + V + VDV + H + I Sbjct: 115 SSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHSTVDVNGIKFTAFHAGH-VLGAAMFQIE 173 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 ++ TGD+ + D L + L+ +ST + + Sbjct: 174 IAGLRVLFTGDYSREVDRHLNS-------AEVPPLSSNVLIVESTFGTATHEPRLNRE-R 225 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K I V ++ R + I+ I ++ Sbjct: 226 KLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEY 261 >gi|114145469|ref|NP_061301.2| DNA cross-link repair 1A protein [Mus musculus] gi|148669815|gb|EDL01762.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform CRA_b [Mus musculus] Length = 1029 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 107/326 (32%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 716 AYFLTHFHSDHYAG---LSKDFTRPVYCSEITGNLLKKKLR----VQEQYIRQLPMDTEC 768 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + + NH P ++ + P I+HTGD++ D + Sbjct: 769 VVDSVKVVLLDANH-CPGATMILFQLPNGAVILHTGDFRADPSMER---------SRLAG 818 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + + + + + Sbjct: 819 RKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLA 878 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 879 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEVSSLITTDMC----DSLVHL 920 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + + Sbjct: 921 LPMMQINFKGLQSHLKKCGGKYDQILAFRPTGW--THSNNITSTADIIPQTRGNISIYGI 978 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 979 PYSEHSSYLEMKRFVQWLKPQKIIPT 1004 >gi|60359840|dbj|BAD90139.1| mKIAA0086 protein [Mus musculus] Length = 984 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 107/326 (32%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 671 AYFLTHFHSDHYAG---LSKDFTRPVYCSEITGNLLKKKLR----VQEQYIRQLPMDTEC 723 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + + NH P ++ + P I+HTGD++ D + Sbjct: 724 VVDSVKVVLLDANH-CPGATMILFQLPNGAVILHTGDFRADPSMER---------SRLAG 773 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + + + + + Sbjct: 774 RKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLA 833 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 834 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEVSSLITTDMC----DSLVHL 875 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + + Sbjct: 876 LPMMQINFKGLQSHLKKCGGKYDQILAFRPTGW--THSNNITSTADIIPQTRGNISIYGI 933 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 934 PYSEHSSYLEMKRFVQWLKPQKIIPT 959 >gi|73620752|sp|Q9JIC3|DCR1A_MOUSE RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1 homolog A Length = 1026 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 107/326 (32%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 713 AYFLTHFHSDHYAG---LSKDFTRPVYCSEITGNLLKKKLR----VQEQYIRQLPMDTEC 765 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + + NH P ++ + P I+HTGD++ D + Sbjct: 766 VVDSVKVVLLDANH-CPGATMILFQLPNGAVILHTGDFRADPSMER---------SRLAG 815 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + + + + + Sbjct: 816 RKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLA 875 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 876 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEVSSLITTDMC----DSLVHL 917 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + + Sbjct: 918 LPMMQINFKGLQSHLKKCGGKYDQILAFRPTGW--THSNNITSTADIIPQTRGNISIYGI 975 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 976 PYSEHSSYLEMKRFVQWLKPQKIIPT 1001 >gi|76655155|ref|XP_580486.2| PREDICTED: Snm1-like [Bos taurus] gi|297490989|ref|XP_002698556.1| PREDICTED: Snm1-like [Bos taurus] gi|296472627|gb|DAA14742.1| Snm1-like [Bos taurus] Length = 1051 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 108/326 (33%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L P+Y S LL++K ++ + Sbjct: 738 AYFLTHFHSDHYAG---LSKNFTFPIYCSKITGNLLKSKL----HVQEQYIHPLPTDTEC 790 Query: 130 DVGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ I+HTGD++ D +G Sbjct: 791 IVNGIKVILLDANH-CPGAVMILFCLPNGHVILHTGDFRADPSMER---------SLLGC 840 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E + S++ + + + LV + S+ + + + Sbjct: 841 HKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRALVVCGTYSIGKEKIFLA 900 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ + + + S Sbjct: 901 IADVLGSKV---GMSKEKYNTL-----------QCFNIPEVSSFITTDMC----NSLVHL 942 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + L + + + + Sbjct: 943 LPMMQINFKGLQNHLKKCGGKYNQILAFRPTGW--THSNKLTSLADIIPQTKGNISIYGI 1000 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 1001 PYSEHSSYLEMKRFVQWLKPQKIIPT 1026 >gi|197102904|ref|NP_001127045.1| cleavage and polyadenylation specificity factor subunit 3 [Pongo abelii] gi|55733623|emb|CAH93488.1| hypothetical protein [Pongo abelii] Length = 647 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 52/428 (12%), Positives = 120/428 (28%), Gaps = 61/428 (14%) Query: 36 MIDCGVSFPKDDL---PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-- 90 M+DCG+ + + P +DL+ P + + I+H H DH GAL Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTS 51 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGA 133 + + + I + + +V Sbjct: 52 FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAG 111 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 H + +I +++TGD+ +D L I N Sbjct: 112 IKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDI 163 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--- 250 L+ +ST E+ + + ++ R + ++ I ++ Sbjct: 164 LIIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN 222 Query: 251 ----GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE- 304 + SSL + + D++ + + + + + + Sbjct: 223 HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDD 282 Query: 305 ---------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQG 353 P + LSR + +++ VI + + G + + + G Sbjct: 283 IGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSG 342 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIAC 412 ++ + + + S H + ++P ++ +HGE L + Sbjct: 343 QKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDND 402 Query: 413 VPPVRNGK 420 + Sbjct: 403 EVHIEVHN 410 >gi|229058439|ref|ZP_04196823.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH603] gi|228719948|gb|EEL71538.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH603] Length = 417 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 58/418 (13%), Positives = 132/418 (31%), Gaps = 72/418 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A Sbjct: 51 AVFLSHIHEDHTMGLPLLTKYGYKKKIWTTRYTKEQLPAYFEKWGNYNLSKGWNLPYNDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 NIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ ++ + + +I + A+ Sbjct: 171 SNIL------RANLPENLRSDIKIAIVDAAY--HTDDVSQKERVDELCAEIERVAQNKGT 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 S+ R + I+ + G + + + + V Sbjct: 223 ALLPLPSLGRAQDIVLYLYERYKELPIIVDKEIFAGFEEMFIYKDWLKNNEKLERVLESL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ E++++IF+ Sbjct: 283 KRNIIVMDNDICMQNSYGIVVMSDANMQTKRAQLY------YEQLRHEERNSIIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 G+ RV E V H +D+K M + P+ V +H Sbjct: 337 KGSFAEKF--------LKERVGKECRVKRVPYKVHQSISDVKEMLNTLLPEHTVLVHA 386 >gi|156083689|ref|XP_001609328.1| cleavage and polyadenylation specifity factor [Babesia bovis T2Bo] gi|154796579|gb|EDO05760.1| cleavage and polyadenylation specifity factor [Babesia bovis] Length = 709 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 86/292 (29%), Gaps = 67/292 (22%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 LG E+G + G + +M DCG+ L GV P I Sbjct: 19 NITVLGAGCEVGRSCVFAERGKHN----VMFDCGL---HPALSGV-GALPVFEAID--LS 68 Query: 67 NLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCI--- 121 + ITH H DH GA+ L S ++ + + +++ + Sbjct: 69 KVDLCLITHFHLDHCGAVPYLLSKTSFKGRIFMTYATKAICHLLWTDYARMEQLQTVKSI 128 Query: 122 -------------------------------------------SFQAGDKVDVGAFSIES 138 + ++ DVG Sbjct: 129 FDRTAPRDLQDGSDSKEGLMDELICGSGLYSFDDVEYALSKIETIDFHEEKDVGGIKFSC 188 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 R H + ++ I++TGD+ + D + I L+C+S Sbjct: 189 YRAGH-VLGASMFLVEMDGVRILYTGDYSTEVDRHVPC-------AEIPPINAHLLICES 240 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 T +R ++ ++ + +++ ++ R + I+ I ++ Sbjct: 241 TYGIRIHEERVQRE-RRFLRSVIEIVTRGGKCLLPVFALGRAQEILLILDEY 291 >gi|153831110|ref|ZP_01983777.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873400|gb|EDL71535.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 460 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 128/442 (28%), Gaps = 89/442 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 22 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFSLGHV 72 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC-- 120 A+ +THAH DH G L L + P+Y + L+ +S K Sbjct: 73 DALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERV 132 Query: 121 --------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 V + H I + + IR P +V +GD Sbjct: 133 LTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDL 191 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 192 GPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLT 241 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 242 DGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLW 299 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 + + + + + R S GE V A Sbjct: 300 GREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDY 359 Query: 334 ------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPN 374 + G E +G E + +H S H Sbjct: 360 LKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKA 419 Query: 375 DLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 420 DLLRFITGIPEKPKQVHLIHGE 441 >gi|260062297|ref|YP_003195377.1| hypothetical protein RB2501_11907 [Robiginitalea biformata HTCC2501] gi|88783859|gb|EAR15030.1| hypothetical protein RB2501_11907 [Robiginitalea biformata HTCC2501] Length = 455 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 72/463 (15%), Positives = 140/463 (30%), Gaps = 103/463 (22%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV---FPD 57 M EL F G G + + L + + I++DCG+ L ++ P Sbjct: 1 MMKTELRF--WGAAGCVTGSKYLI----SNQQGRILVDCGLFQGLKSLRALNRASWEIP- 53 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRV 110 ++ A+ +TH H DH G L L +Y + + + AK Sbjct: 54 -------PADIAAVVLTHGHLDHVGLLPRLVREGFRGKIYGTRPTLAIARIILEDSAKIQ 106 Query: 111 YERVSKKIPC--------------------------ISFQAGDKVDVGAFSIESVRVNHS 144 E K + + + V + + H Sbjct: 107 MEEAEKALKEGYSRHAKPEPLYSLEDVANTLPLFSSVETGEWIALPVPGWRVRYTPNGH- 165 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 I + + + + +V +GD +D +L L+ +ST R Sbjct: 166 ILGSCFIEMDAGGTRVVFSGDIGRREDLLLPPPGRPRR--------ADVLLLESTYGNRL 217 Query: 205 GTC-ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLL 257 E + I + + +G ++ +F+ V R+++I+ I ++ R V + Sbjct: 218 HPDLDMEAELAAQIKGTITD-RGTCIIPSFA--VERLQAIMLILLKLRQRNRIPRLPVYI 274 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFG----------------LYPREQLIVIATG- 300 S + V + PR +++V +G Sbjct: 275 DSPMGTNVFELFGRFPNWHKLSRSDFQEMKREFLIVSDYSETWKAIDDPRPKVVVAGSGM 334 Query: 301 -SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 S G + LAQL E+ ++ G ++ E + Sbjct: 335 LSGGRVLTYLAQLLD--------REETRILLMGYQAEG--TRGRNLLEGARELKIFGKYI 384 Query: 360 DAECPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 +H +S H ++ + +P + +HGEP Sbjct: 385 RVAAGIHHYESLSAHADQEEILWWTAGMENQPGHIFLVHGEPT 427 >gi|163939600|ref|YP_001644484.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163861797|gb|ABY42856.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 420 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 58/418 (13%), Positives = 133/418 (31%), Gaps = 72/418 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 8 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIEREVVPF----------LD 53 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A Sbjct: 54 AVFLSHIHEDHTMGLPLLTKYGYKKKIWTTRYTKEQLPAYFEKWGNYNLSKGWNLPYNDQ 113 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 114 NIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 173 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ ++ + + +I + A+ Sbjct: 174 SNIL------RANLPENLRSDIKIAIVDAAY--HTDDVSQKERVDELCAEIERVAQNKGT 225 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 V S+ R + I+ + G + + + + V + Sbjct: 226 VLLPLPSLGRAQDIVFYLYERYKELPIIVDKEILAGFEEMFIYKDWLKNKEKLERVVEVL 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ E++++IF+ Sbjct: 286 KRNIIVMDNDICMQNSYGIVVMSDANMQTKRAQLY------YEQLRHEERNSIIFTGHIA 339 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 G+ V E V H +D+K M + P+ V +H Sbjct: 340 KGSF--------AEKVMKECVSRECRVERVPYKVHQSISDVKAMLNTLLPEHTVLVHA 389 >gi|298682255|gb|ADI95318.1| beta-lactamase domain-containing protein [Pseudomonas putida] Length = 251 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 86/266 (32%), Gaps = 52/266 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LGG G + + + +++DCG+ F + P + L A Sbjct: 6 LGGTGTVTGS----KFLLTRDSTRVLVDCGL-FQGFKQLRLRNWQPLPPALRA----LDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RVSKKIPCI 121 + +THAH DH G L L P+YA+P L E A+ E + + Sbjct: 57 VVLTHAHLDHSGYLPVLVREGYRGPIYATPATCALAEILLLDSARLQEEQAEHANRHGYS 116 Query: 122 SFQAGDKVD-----------VGAFSIE-----------SVRVNHSIPETMALVIRSPVGN 159 + ++ +R I + I + Sbjct: 117 KHAPAQPLYTEQDAKRALALFRPVALHQVTMIAEGMELLLRTAGHILGAATVQISAEGQT 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIY 218 ++ +GD + + L+ +ST R+ S E+ + K I Sbjct: 177 VLFSGDLGR-PQDPIMRAPELVRTA-------DVLLIESTYGDRQHPAESTEQYLAKVIN 228 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSII 244 + + G LV +F+ V R + ++ Sbjct: 229 ETLLRH-GITLVPSFA--VGRAQLLM 251 >gi|253742318|gb|EES99157.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia intestinalis ATCC 50581] Length = 620 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 69/464 (14%), Positives = 131/464 (28%), Gaps = 68/464 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDL-VFPDITF 60 ++V +PLG IG + L GS S ++DCG+ + + +P L D+ + Sbjct: 9 DIVVIPLGMSPRIGNSCYLVIVGSKVS---FLLDCGLRTSAPDGERVPSFKLKCLQDMGY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHD---LWSFLHVPVYASPFAIGLLEAK--------- 108 ++ +L I I+HAH DH GAL L+ + PVY + LL Sbjct: 66 SLER--DLDFIIISHAHFDHSGALPFLFSLFPNFNRPVYTTEATKFLLPQMYADYDRVFD 123 Query: 109 -------------------------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 + + + D V I H Sbjct: 124 NTNQSMSKLEKQARTAEVRSRIISLLRTYKNNTNFVADCQPSHDGKPVPETIINFSNAGH 183 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM- 202 I + V + +V+TGD+ L T G L+ ++T Sbjct: 184 IIGAVITTVTVAGHAKLVYTGDYNTTARTTLPGATLPS-----CAIGADILITETTYCNI 238 Query: 203 --REGTCISEKGIKKNIYDIMKNAKGCVLVTTFS----SSVSRIRSIIDIAEQIGRKIVL 256 R + + G VL+ T + + ++ + + Sbjct: 239 SRRPSFYRDSLQLADVAETL--RQNGRVLLPTSAMGLCQDIIVKVWSFWERFRLNKNRLF 296 Query: 257 LGSSLKRVVSVAID---VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 L + + + ++ A + + ++ +I TG+ E + + Sbjct: 297 LATGMIKQMTDAQRILGNYSLDTTPFTSLPIYHRMREFDRRYIIPTGTATEE-AVSKVMG 355 Query: 314 RGEMRNVKLAEKDTVIFSSR--AIPGNEVAIGH--IKNRLVEQGVRVIAEDAECPVHVSG 369 + A + S+ G + +++ + Sbjct: 356 GPSADGLASANDSWCVISAPNQTKTGVTLDCFMQIVQDPKALVAYPGHMPLMGYNWRIIR 415 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 H + L Q P A H V + Sbjct: 416 HAAKHILFDNMQTAVPINCRATHLAFNAHVDFNGIIKTIDFLNP 459 >gi|309782661|ref|ZP_07677382.1| metallo-beta-lactamase family protein [Ralstonia sp. 5_7_47FAA] gi|308918439|gb|EFP64115.1| metallo-beta-lactamase family protein [Ralstonia sp. 5_7_47FAA] Length = 454 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 72/469 (15%), Positives = 132/469 (28%), Gaps = 74/469 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + + G + +M+DCG+ F + + ++ A Sbjct: 6 LGATDTVTGSKYVLETG----GRRVMVDCGL-FQGYKSL----RLRNWDKLAVNPHHIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-VYERVSKKIPCISFQAGDK 128 + +THAH DH G L L H PVY + L R++++ + G Sbjct: 57 VVLTHAHIDHSGYLPLLVRNGFHGPVYCTKGTAELCNILLPDSARLAQEDAQYANAEGFS 116 Query: 129 VDV------------------------------GAFSIESVRVNHSIPETMALVIRSPVG 158 E R H I + + Sbjct: 117 RHHPALPLYDEKDAARALRRLHPVGYGERFSVAEGVEAEFHRAGH-IIGAATATLLTEGR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 IV +GD D ++ + + L+ +ST R + + Sbjct: 176 RIVFSGDLGRQVDPVMRP---PEPIAE-----ADTLLVESTYGDRVHPAGDPLDALERVV 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDI----AEQIGRKIVLLGSSLKRVVSVAIDVGII 274 G +L+ F+ V R + ++ + V + + +A V Sbjct: 228 QRTIGQGGTLLIPAFA--VGRTQELLYCLYMLIREHRIPHVPIYLD-SPMAELATGVFAH 284 Query: 275 KKDQLFLSDESF--------GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 D L + + EQ + + A + ++ G L Sbjct: 285 HIDDLHIEAADCQAACALAIPVQSPEQSRHLGNDRAPKIILAASGMATGGRVLHHLKNFG 344 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED-------AECPVHVSGHPYPNDLKRM 379 ++ + G + A L Q + E ++S H N+L Sbjct: 345 GGKRNAILMSGFQAAGTRGAALLAGQRALRVHGREVAIRASVEQIQNLSAHADANELMTW 404 Query: 380 YQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 + PQ +HGEP A ++ E V + L Sbjct: 405 LRGFTRPPQQTFIVHGEPAASDALRQRIEHELQWSVCMPEYRESYELEG 453 >gi|296502388|ref|YP_003664088.1| zinc-dependent hydrolase [Bacillus thuringiensis BMB171] gi|296323440|gb|ADH06368.1| zinc-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 419 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 55/445 (12%), Positives = 130/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ +D P ++ L A Sbjct: 7 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDGYPKIEREAAPF---------LDA 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 54 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNLPYSDQH 113 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + V + + + + ++ + ++GD+ + Sbjct: 114 IKDLNYVCIDEISNPNEWVQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + +I + + + Sbjct: 174 NIL------RANLPEKLGHNIKVAIVDAAY--HTEDVSQNERLDNLCAEIERVMQNKGIA 225 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + V K Sbjct: 226 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFVYKDWIKNNEELKWVMESLK 285 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 286 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 339 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V V H D+K M + P+ V +H Sbjct: 340 GSF--------AEKVMKEHVRNTCRVNRVAYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 391 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 DTDRLQQKLSTAGYENVYSLAMERI 416 >gi|238927116|ref|ZP_04658876.1| RNA-metabolising metallo-beta-lactamase [Selenomonas flueggei ATCC 43531] gi|238885096|gb|EEQ48734.1| RNA-metabolising metallo-beta-lactamase [Selenomonas flueggei ATCC 43531] Length = 536 Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 75/521 (14%), Positives = 144/521 (27%), Gaps = 102/521 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L G ++DCG+ L + + + A Sbjct: 6 LGAAHVVTGSCFLIHTG----DHKYLVDCGMYQGTRRLREM-----NYEPFPFNPAEIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI----------- 118 +F+THAH DH G + L +YA+ L+ ++ Sbjct: 57 VFLTHAHIDHCGRIPRLVREGFSGKIYATRATCDLVRIMLPDSAHIQESDAELLNRKNAR 116 Query: 119 --------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 + + V G S+ H I + L I G Sbjct: 117 RNEAPITPLYTQADAFAALEHFMPVLYQETVQEGNVSVTFHDAGH-ILGSAILEIVVREG 175 Query: 159 N----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD IL D + + G L+ +ST R ++ Sbjct: 176 MQESKLVFSGDLGQPHQPILR---DPELM-----TGADFLVAESTYGDRIHRDYDKETAL 227 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + + G V++ +F+ V R ++++ + G I + Sbjct: 228 LEVIRDTMDRGGNVIIPSFA--VGRTQTLLY----YFYNLWKEGR--LDDDIPIIIDSPL 279 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNVKLAEKDTVIFSS 332 + +++ + E + + +++ E R + AE +I S+ Sbjct: 280 AIQATRVFLKNYEDFDEETIAFFGAEGMTPAFPQV-RIAETAAESRALNSAEGSAIILSA 338 Query: 333 RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP---------------------------- 364 + + H+K+ L V+ + Sbjct: 339 SGMADAGRVLHHLKHNLWRPESTVLFVGYQAEGSLGRRLVDGIKRVRILGEEIAVKAKIQ 398 Query: 365 --VHVSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 S H + I RP + +HGE A KE +E V G Sbjct: 399 VLDGFSAHADAEQTVEWMRSITSPRPAKVFLVHGEGQAQEALKERIQEELGLEVYVPFLG 458 Query: 420 KMLRLFPDPI----EIIDEVVHGLFLKDGFLIGKFADLGIA 456 ++ + I V ++D + Sbjct: 459 DLVTIQGRSAVLIPSNIPSVSVEAEMEDALRDFDAEYRLLR 499 >gi|119720469|ref|YP_920964.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119525589|gb|ABL78961.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 441 Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 37/262 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG E G + +G ++ + D GV G P ++ Sbjct: 1 MRLVFLGGYREQGRSCLALEHG----GRYYVFDVGVK---KVYSGGKYGEPPFLGLID-A 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-LEA--KR------------ 109 + A+F++H HEDH A+ L + P+Y S L ++ K Sbjct: 53 GKVEAVFVSHLHEDHLAAVPALVRRGFNGPIYMSAPTAELGIKQWYKWTVLEEDGKPLFT 112 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + G V G + + H++ +M + + ++++ D Sbjct: 113 EEDCDEARKMVKTVGDGSVVTSGDVEVAFHQSGHAL-GSMYMEVSVGGWSMLYAADINRG 171 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCV 228 A ++ +++ R + E+ + + + +K + Sbjct: 172 SSVF--------RDPAPAPSSYDVVIANASYGDRVVDAGVGERRVAALVLETVKRGGTAL 223 Query: 229 LVTTFSSSVSRIRSIIDIAEQI 250 + ++V R + + I + Sbjct: 224 I---PVTAVGRGQETLMILLRS 242 >gi|49184627|ref|YP_027879.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49178554|gb|AAT53930.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] Length = 436 Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 24 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 69 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 70 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 129 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 130 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 189 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 190 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQRERVNELCTEIERAAGNKGI 241 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 242 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 301 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 302 KRNIIVMDDDGGTQHSCGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 355 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 356 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 408 EDTDRLQKKLSTAGYENVYSLTMERI 433 >gi|163803554|ref|ZP_02197422.1| hypothetical protein 1103602000586_AND4_18121 [Vibrio sp. AND4] gi|159172641|gb|EDP57497.1| hypothetical protein AND4_18121 [Vibrio sp. AND4] Length = 449 Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 86/258 (33%), Gaps = 39/258 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I+IDCG+ K+ G DI F +K + A+ Sbjct: 15 GGKHTVTGSC----HELKLPSGSILIDCGLFQGKELHFGHRKASLDIEFPIKH---IKAL 67 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK-------------- 116 +THAH DH G L L + P+Y + LL + Sbjct: 68 VLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELLPLMLEDGLKLQLGLKNHQRQQILNV 127 Query: 117 -KIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 K + + +G + H + +V +GD D +L Sbjct: 128 IKKQLRAHDYQQWLPLGKQCYLRFQPAGHILGSAYVECKLPNNEVVVFSGDLGPCDTPLL 187 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVT 231 + L +ST ++ I+ + + + I+ +A G +++ Sbjct: 188 PNPLSPVR--------ADYLFIESTYGNKQHEAIATRI--QRLNQIIDHALADGGVIMIP 237 Query: 232 TFSSSVSRIRSIIDIAEQ 249 FS V R + ++ EQ Sbjct: 238 AFS--VGRTQELLFDIEQ 253 >gi|228964778|ref|ZP_04125885.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus thuringiensis serovar sotto str. T04001] gi|228795028|gb|EEM42527.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus thuringiensis serovar sotto str. T04001] Length = 419 Score = 87.4 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 53/451 (11%), Positives = 134/451 (29%), Gaps = 70/451 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKE 64 + GG GE G + Y + I+ DCG++ +D P ++ + Sbjct: 1 MRIEIWGGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REA 47 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------- 113 L A+F++H HEDH L L + ++ + + L K Sbjct: 48 VPFLDAVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNL 107 Query: 114 ---------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++ + + + + + + ++ + ++G Sbjct: 108 PYSDQHIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDLCNTYVFYSG 167 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + + + + +L I + D+ + + +I + Sbjct: 168 DYSAESNIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVM 219 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAID 270 + + + R + I+ + G + + + + Sbjct: 220 QNKGIALLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKDWIKNNEELKW 279 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + K + + D + ++V++ + R+ L ++ ++++VIF Sbjct: 280 IMESLKRNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLC------YEQLRNEKRNSVIF 333 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + G+ V + V H D+K M + P+ V Sbjct: 334 TGHIAKGSF--------AERVMKEHVRSTCRVKRVPYKVHQSIKDVKEMLNTLLPEHTVL 385 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H ++ G V + ++ Sbjct: 386 VHALKEDTDRLQQKLSTAGYENVYSLAMERI 416 >gi|218896724|ref|YP_002445135.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|218543689|gb|ACK96083.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] Length = 419 Score = 87.4 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 53/451 (11%), Positives = 134/451 (29%), Gaps = 70/451 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKE 64 + GG GE G + Y + I+ DCG++ +D P ++ + Sbjct: 1 MRIEVWGGAGEYGRSC----YFVKNKETKIVFDCGINRSYEDSYPKIE---------REA 47 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------- 113 L A+F++H HEDH L L + ++ + + L K Sbjct: 48 VPFLDAVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNL 107 Query: 114 ---------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++ + + + + + + ++ + ++G Sbjct: 108 PYSDQHIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDLCNTYVFYSG 167 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + + + + +L I + D+ + + +I + Sbjct: 168 DYSAESNIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVM 219 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAID 270 + + + R + I+ + G + + + + Sbjct: 220 QNKGIALLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKDWIKNNEELKW 279 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + K + + D + ++V++ + R+ L ++ ++++VIF Sbjct: 280 IMESLKRNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLC------YEQLRNEKRNSVIF 333 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + G+ V + V H D+K M + P+ V Sbjct: 334 TGHIAKGSF--------AERVMKEHVRSTCRVKRVPYKVHQSIKDVKEMLNTLLPEHTVL 385 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H ++ G V + ++ Sbjct: 386 VHALKEDTDRLQQKLSTAGYENVYSLAMERI 416 >gi|254851399|ref|ZP_05240749.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|3724326|dbj|BAA33615.1| unknown [Vibrio cholerae] gi|254847104|gb|EET25518.1| conserved hypothetical protein [Vibrio cholerae MO10] Length = 446 Score = 87.4 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 130/444 (29%), Gaps = 93/444 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERK 66 NM + +G + + ++IDCG+ F + V+ Sbjct: 8 NMEVVHHGGKASVTGSCHELRADGQALLIDCGL-FQGADERPLAVEFAL----------G 56 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------------- 111 ++ A+ +THAH DH G L L + P+Y + L+ Sbjct: 57 HVDALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSE 116 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTG 164 R+ + + A + + H I + + IR P +V +G Sbjct: 117 RVLTEVRRLLRVQDYQKWFAVQPKCADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSG 175 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D +L D + L ++T ++ + + + + +++ + Sbjct: 176 DLGPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERS 225 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGI 273 G +L+ FS V R + ++ EQ I+L +RV Sbjct: 226 LTDGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQ 283 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + + + + + + R S GE V A Sbjct: 284 LWGREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIM 343 Query: 334 --------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPY 372 + G E +G E + +H S H Sbjct: 344 DYLKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHAD 403 Query: 373 PNDLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 404 KADLLRFIAGIPEKPKQVHLIHGE 427 >gi|154483590|ref|ZP_02026038.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] gi|149735500|gb|EDM51386.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] Length = 273 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 17/166 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N L ++ I++D G+ ++ L F K+ +N+ I ITH Sbjct: 20 GNCILVE----NNNSSILVDVGISRKKAEEGL----------EFFGKKPENIDGIVITHE 65 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L VPVYA+ I + + + + Sbjct: 66 HSDHIKGLGVFLRKYQVPVYATEGTINCILNN-KTVGKVDSDLFNVIKPDRDFSIKDIEL 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++H + + + D DD ++ + + D+ Sbjct: 125 LPLHISHDAADPVCYRFFEKEKSCAVVTDLGEYDDKLVSSLQNLDA 170 >gi|291486674|dbj|BAI87749.1| hypothetical protein BSNT_06196 [Bacillus subtilis subsp. natto BEST195] Length = 264 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEDHAFLVDAGLS--GKAMDGL------MAQIGRKLDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E + F G +ES V+H Sbjct: 69 VVARKYKLPIYANEKTWKAMENQI---GKIDTDQKFVFPMETVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|220933632|ref|YP_002512531.1| metallo-beta-lactamase superfamily protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994942|gb|ACL71544.1| metallo-beta-lactamase superfamily protein [Thioalkalivibrio sp. HL-EbGR7] Length = 466 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 71/488 (14%), Positives = 142/488 (29%), Gaps = 92/488 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F LG VGE+ + L + + ++++CG+ G + ++K Sbjct: 3 KLTF--LGAVGEVTGSRYLIE----TDKSTLLLECGL-----HQGGAQADRANQASLVKL 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------ 111 + + A+ ++H H DH G + L P+Y +P + LL+ Sbjct: 52 ARRVDAVILSHGHLDHSGLVPKLVRDGYRGPIYCTPGTLDLLKIMWRDAAVVMGKDVEWE 111 Query: 112 ----------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 E + + + + H + I Sbjct: 112 NKWRRRADKRLLDPIYEDEDVERALNLCEPIPYRRLEQIKGSVGLMYHDAGHILGSAIVE 171 Query: 156 -------PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +V +GD D ++ T E ++ +ST R Sbjct: 172 LTVPSGGRERRLVFSGDLGNPDSVLMHSPTRL--------EHADRVLMESTYGNRNHR-P 222 Query: 209 SEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--------QIGRKIVLLG 258 E I++ I + G VL+ F+ V R + ++ + R + Sbjct: 223 MEDTIEELAGILEQAHADGGNVLIPAFA--VGRTQEVLYHLSMLYQAGRLKHQRVFLDSP 280 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--- 315 +++ A + L +++ E L + E A+ ++ G Sbjct: 281 MAIEVTELYARRRKALDPKDLERLEQNGNGELAEALPPLQFSRSVEDSMAINRIQGGAII 340 Query: 316 -------------EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 L +D VIF G + + + + + Sbjct: 341 IAGSGMCNGGRIRHHLKYNLWRQDAHVIFVGFQAAG--TLGRRLVDGVEKVKLLGSEVAV 398 Query: 362 ECPVHV----SGHPYPNDLKRMYQWIRPQ-VLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + +H S H + L R + +HGEP A E ++ Sbjct: 399 KARIHTLGGFSAHAGQSQLLDWAAAFRDRPAFHLVHGEPEAQQALAEALKRQHGIEANIP 458 Query: 417 RNGKMLRL 424 G + + Sbjct: 459 GLGDSVEI 466 >gi|170706592|ref|ZP_02897052.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|254759834|ref|ZP_05211858.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|170128690|gb|EDS97557.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] Length = 419 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 113 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQRERVNELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSCGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|221312014|ref|ZP_03593861.1| hypothetical protein Bsubs1_21786 [Bacillus subtilis subsp. subtilis str. 168] gi|221321252|ref|ZP_03602546.1| hypothetical protein BsubsJ_21645 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325535|ref|ZP_03606829.1| hypothetical protein BsubsS_21801 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767871|ref|NP_391917.2| hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|321313598|ref|YP_004205885.1| putative hydrolase [Bacillus subtilis BSn5] gi|264675896|sp|C0SP91|YYCJ_BACSU RecName: Full=Putative metallo-hydrolase yycJ gi|225185499|emb|CAB16074.2| putative hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|320019872|gb|ADV94858.1| putative hydrolase [Bacillus subtilis BSn5] Length = 264 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEDHAFLVDAGLS--GKAMDGL------MAQIGRKLDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E + F G +ES V+H Sbjct: 69 VVARKYKLPIYANEKTWKAMENQI---GKIDTDQKFVFPMETVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|221316339|ref|ZP_03598144.1| hypothetical protein BsubsN3_21692 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|1064810|dbj|BAA11296.1| yycJ [Bacillus subtilis] Length = 268 Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEDHAFLVDAGLS--GKAMDGL------MAQIGRKLDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E + F G +ES V+H Sbjct: 69 VVARKYKLPIYANEKTWKAMENQI---GKIDTDQKFVFPMETVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|54295102|ref|YP_127517.1| hypothetical protein lpl2182 [Legionella pneumophila str. Lens] gi|53754934|emb|CAH16422.1| hypothetical protein lpl2182 [Legionella pneumophila str. Lens] Length = 452 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 142/474 (29%), Gaps = 77/474 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L S+ K I++DCG+ F +L + + + Sbjct: 1 MKLSF--LGATGTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +++ A+ +THAH DH G L L +YA+ L + Sbjct: 50 SPESIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATAATTDLCSILLPDSGFLHEEDARR 109 Query: 123 FQAGDKVDVGA-------------------------------FSIESVRVNHSIPETMAL 151 I R H I + + Sbjct: 110 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLMEDCEISWHRAGH-ILGSAFI 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 169 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKYTDYLVIESTYGNRLHDKTDPL 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VL+ F+ V R ++++ + + I + L + A Sbjct: 221 AFIANIVNTTCKRGGTVLIPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDA 278 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + G + + + + + G Sbjct: 279 TELLLKHHNEHRLSAEECRAVCQIATYVHTPNESMAVDWGRESKIIISASGMMTGGRVLH 338 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 339 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSVKIHGDDYPVRAQVAMLTNASAHADY 398 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL---HLVAHKELALQEGIACVPPVRNGKML 422 ++ + P+ + HGEP L H E L + + Sbjct: 399 EEILVWLKHFEKAPKEVFITHGEPQAALGLKEHIEAELGWNCKIPNYLEKVNLD 452 >gi|295676626|ref|YP_003605150.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1002] gi|295436469|gb|ADG15639.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1002] Length = 454 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L I+IDCG+ F +L + + Sbjct: 1 MKLTFLGASETVTGSKYLLE----EPGLRILIDCGL-FQGLK----NLRLRNWAALPVPA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 ++ A+ +THAH DH G L L PVY +P L + AK E Sbjct: 52 DSIDAVILTHAHLDHSGYLPLLARNGFRGPVYCTPGTASLCDIMLRDSAKLQEEEAEFAN 111 Query: 119 PCISFQAGDKVDV-------------------------GAFSIESVRVNHSIPETMALVI 153 + + + + H I ++V+ Sbjct: 112 RHGFSKHRPALPLYTQDDAQRALHLLAPRRFDTPVDLPHGLCFRFLPSGH-ILGAASVVM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD D L+ +ST R + + Sbjct: 171 CRNHKVLAFSGDVG--------RPEDPIMRAPAPLAHADYLVVESTYGDRLHPDSNPRDD 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + I+ G V++ F+ V R + ++ + Sbjct: 223 LERIFSRTFAKGGVVVMPCFA--VGRAQEVLYHIAK 256 >gi|320168273|gb|EFW45172.1| SNM1 [Capsaspora owczarzaki ATCC 30864] Length = 864 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 109/346 (31%), Gaps = 44/346 (12%) Query: 55 FPDITFIMK--ERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 PD TF++ + F+TH H DHYG L W P+Y S L Sbjct: 521 MPDTTFVVDAFRFGRIAGCTGYFLTHFHSDHYGGLSKGWRH--GPIYCSEATANLAVHVL 578 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKL 168 V+ + + V V + + NH P + + P G + +HTGD++ Sbjct: 579 ---GVADDMLHRLPMDRE-VTVDGVGVTLIDANH-CPGSCLIKFVLPDGRVYLHTGDFRA 633 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 D + + L D+T T S++ + I + Sbjct: 634 DPAMLAHQALAQCRFA--------MLYLDTTYCDPRYTFPSQQEVVSFCARISRAMVVRN 685 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 +LV + + + + IA+ +G K + L + + +L Sbjct: 686 SRLLVVVGTYQIGKEKVFQSIAKALGVKAAVDPHKL-------RILQCLNNKELSDILTL 738 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 R ++ + + S ++ L+ + FSS+ + Sbjct: 739 DKNSTRLHILPLFSLSAKSLQAYLSNFRPHYNAVLAFRP-TGWTFSSKLVS--------- 788 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + ++ V S H ++L ++ ++ Sbjct: 789 ---VADIQPQITGNICMYGVPYSEHSSFSELGEFVAALKATKVIPT 831 >gi|153826736|ref|ZP_01979403.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739451|gb|EDM53689.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 460 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 128/444 (28%), Gaps = 93/444 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERK 66 NM + +G + + ++IDCG+ F + V+ Sbjct: 22 NMEVVHHGGKASVTGSCHELRADGQALLIDCGL-FQGADERPLAVEFALA---------- 70 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC 120 ++ A+ +THAH DH G L L + P+Y + L+ +S K Sbjct: 71 HVDALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSE 130 Query: 121 ----------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTG 164 V + H I + + IR P +V +G Sbjct: 131 RVLTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSG 189 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D +L D + L ++T ++ + + + + +++ + Sbjct: 190 DLGPSYTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERS 239 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGI 273 G +L+ FS V R + ++ EQ I+L +RV Sbjct: 240 LTDGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQ 297 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + + + + + + R S GE V A Sbjct: 298 LWGQEAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIM 357 Query: 334 --------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPY 372 + G E +G E + +H S H Sbjct: 358 DYLKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHAD 417 Query: 373 PNDLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 418 KADLLRFITGIPEKPKQVHLIHGE 441 >gi|229512735|ref|ZP_04402203.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TMA 21] gi|229350245|gb|EEO15197.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TMA 21] Length = 446 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 128/442 (28%), Gaps = 89/442 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 8 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFALGHV 58 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC-- 120 A+ +THAH DH G L L + P+Y + L+ +S K Sbjct: 59 DALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERV 118 Query: 121 --------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 V + H I + + IR P +V +GD Sbjct: 119 LTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDL 177 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 178 GPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLT 227 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 228 DGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLW 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 + + + + + R S GE V A Sbjct: 286 GREAKSRLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDY 345 Query: 334 ------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPN 374 + G E +G E + +H S H Sbjct: 346 LKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKA 405 Query: 375 DLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 406 DLLRFITGIPEKPKQVHLIHGE 427 >gi|313906064|ref|ZP_07839416.1| ribonuclease Z [Eubacterium cellulosolvens 6] gi|313469109|gb|EFR64459.1| ribonuclease Z [Eubacterium cellulosolvens 6] Length = 265 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 9/164 (5%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 ++ D G+S K G++ + +L IF+TH H DH L L +P Sbjct: 24 LLFDAGIS-GKKTEEGLNAI-------GYTGSDLDGIFVTHEHLDHIKGLGVLARRHGIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ + +E+ + +A V +G +IE R++H E + + Sbjct: 76 IYATKGTLEYIESH-KSCGKIPEGLYHEIKADCPVTIGDMTIEPFRISHDAAEPVGYHLS 134 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 S D D + + + D L N + L S Sbjct: 135 SEGRTAAIATDMGTYTDYTIRHLQNLDVLLLEANHDVNMLEAGS 178 >gi|296329972|ref|ZP_06872456.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676697|ref|YP_003868369.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153011|gb|EFG93876.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414941|gb|ADM40060.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEDHAFLVDAGLS--GKAMDGL------MAQIGRKMDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E + F G +ES V+H Sbjct: 69 VVARKYKLPIYANEKTWKAMENQI---GKIDTDQKFVFPMETVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|121727067|ref|ZP_01680258.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121630578|gb|EAX62968.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 459 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 73/449 (16%), Positives = 130/449 (28%), Gaps = 90/449 (20%) Query: 14 VGEIGMN-MALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 GE N M + +G + + ++IDCG+ D+ P + Sbjct: 14 CGENRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------V 64 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVS 115 ++ A+ +THAH DH G L L + P+Y + L+ +S Sbjct: 65 EFALGHVDALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMS 124 Query: 116 KKIPC----------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGN 159 K V + H I + + IR P Sbjct: 125 PKQSERVLTEVRRLLRVQDYQKWFVVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEV 183 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +V +GD +L D + L ++T ++ + + + + Sbjct: 184 VVFSGDLGPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRA 233 Query: 220 IMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVA 268 +++ + G +L+ FS V R + ++ EQ I+L +RV Sbjct: 234 MIERSLTDGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSY 291 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + + + + + + R S GE V A Sbjct: 292 RRFKQLWGREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQ 351 Query: 329 IFSSR--------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----V 367 + G E +G E + +H Sbjct: 352 GGRIMDYLKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGY 411 Query: 368 SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 S H DL R I +P+ + IHGE Sbjct: 412 SAHADKADLLRFITGIPEKPKQVHLIHGE 440 >gi|326392000|ref|ZP_08213499.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325991954|gb|EGD50447.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 616 Score = 86.7 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 80/234 (34%), Gaps = 47/234 (20%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-------PGVDLVFPDIT 59 F GG IG + L Y + I++D G L +D+ Sbjct: 204 KFFCWGG-DNIGASSYLVSYEGIN----ILLDAGALIKDKTLYYNSTKNLPIDI------ 252 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA----------- 107 +++ + ITHAH DH G + +L L+ P+ S +L+ Sbjct: 253 ------EDIDLVIITHAHLDHSGGIVELLRKGLNSPIIMSRPTKEILKQIFLRGHTKLEV 306 Query: 108 KRVYERVSKKIPCISFQAGDKVDV----GAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 K E + ISF ++ + ++ H I +A+ + I +T Sbjct: 307 KIEEETTNFDSQIISFDTEEESNFTIKNKEVKLKLFPAGH-ILGAVAVYLEIEGIKIFYT 365 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 GD+ L D L + + + L+ ++T + K ++ + Sbjct: 366 GDFTLKDVESN------KGLRFLPDLKVDILITEATYGYGNNFGVQNKYLQDKL 413 >gi|194205654|ref|XP_001495731.2| PREDICTED: similar to DNA cross-link repair 1A protein (hSNM1) (hSNM1A) [Equus caballus] Length = 1043 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 117/326 (35%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ Sbjct: 730 AYFLTHFHSDHYAG---LSKNFTFPVYCSEITGNLLKCKL----HVQEQYIHPLPMDTGC 782 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIV-HTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ P GN++ HTGD++ D + + Sbjct: 783 IVNGVKVVFLDANH-CPGAVMILFYLPNGNVMLHTGDFRADPSMER---------SLLAS 832 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E + S++ + + + + A C LV + S+ + + + Sbjct: 833 QRVHTLYLDTTYCSPEYSFPSQQEVIQFVINTAFEAVTLNPCTLVVCGTYSIGKEKVFLA 892 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ + I + ++ + L+ + + Sbjct: 893 IADVLGSKV---GMSQEKY--KTLQCLNIPEINSLITTDMCNSLVH--LLPMMQINFKGL 945 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +S L + R + S++ + + R + V Sbjct: 946 QSHLKKCGGKYDRILAFRP-TGWTHSNKLTS------------IADVLPRTKGNISIYGV 992 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 993 PYSEHSSFLEMKRFVQWLKPQKIIPT 1018 >gi|73661334|ref|YP_300115.1| metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72493849|dbj|BAE17170.1| putative metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 263 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 25/238 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N S + I++D G++ K + I K+ Sbjct: 3 RMSVLASGSTG----NATYVE----SDKGSILVDAGLTGKKMEEL--------FGQIDKQ 46 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +NL I +TH H DH L L +P+YA+ +E K + F Sbjct: 47 IQNLNGILVTHEHSDHIKGLGVLARKYKLPIYANEKTWTAIEKK---DSKIPMDQKFIFN 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 + + F IES V+H + + + D + D + +D Sbjct: 104 PYETKSLAGFDIESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIQGSDAFV 163 Query: 183 LCAIGNEGILALMC----DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +L + + + +S + + + D++ + + ++ S Sbjct: 164 FESNHDVDMLRMCGYPWKTKQRILSDMGHVSNEDAGRAMTDVITGSTKRIYLSHLSQD 221 >gi|291532887|emb|CBL06000.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Megamonas hypermegale ART12/1] Length = 537 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 67/521 (12%), Positives = 159/521 (30%), Gaps = 94/521 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L ++ ++IDCG F DL + D F+ ++ Sbjct: 6 LGAAHTVTGSCYLLE----ANDHKVLIDCG-MFQGARNLR-DLNYNDFRFV---PSDIDC 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-VYERVSKKIPCISFQAGDK 128 + +THAH DH G + L +YA+ L+ + + I+ + G + Sbjct: 57 VLLTHAHVDHCGLIPKLCKQGFKGDIYATKATCDLVNIMLPDSAHIQESDAQITNRKGQR 116 Query: 129 VDVGAFSI------------ESVRVNHS-----------IPETMALVIRSPVGNIVHTGD 165 + + + V +++ I + ++ S + + T + Sbjct: 117 MGKTPIAPLYTIDDAMASLKQFVPIDYDQEINPVNGIRAIYKDAGHIMGSAIIEVYVTEN 176 Query: 166 -------WKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 + D + D + L+ +ST R+ ++ I Sbjct: 177 GEETKIVFTGDLGQPDQPIIKDPTHIKE-----ADYLVIESTYGDRKHQIYDKETPLAEI 231 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKD 277 + + G +++ +F+ V R ++++ + + + ++ V + + Sbjct: 232 INDTMDRGGNLIIPSFA--VGRTQTMLYYLFK-----LWKANRIEDYSVVVDS--PLAVE 282 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL-SRGEMRNVKLAEKDTVIFSSRAIP 336 + ++ + E I + L S E + + E +I S+ + Sbjct: 283 ATRIFAKNTKYFDDEATEYIRKHGKLPQMPQLRLCESANESKALNTEEGSHIILSASGMA 342 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECP------------------------------VH 366 + H+K+ L ++ + Sbjct: 343 DAGRVLHHLKHNLWRPESTILFVGYQAEGSLGRKLLEGAKKVKVLGEEISVKARIVNMDG 402 Query: 367 VSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 S H + ++ Q + + + +HGE A KE+ +E Sbjct: 403 FSAHADYSQMEEWLQHLTMYNAKQVFVVHGEATASKAVKEMIEEEFGWNAYIPFYADRAI 462 Query: 424 LFPD----PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQ 460 + + I +V ++D F+ + +R Sbjct: 463 MTKNTCEIKAANIPQVSVEKDMEDFFVDVDADYRQLRRRII 503 >gi|296109715|ref|YP_003616664.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus infernus ME] gi|295434529|gb|ADG13700.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus infernus ME] Length = 419 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 66/436 (15%), Positives = 140/436 (32%), Gaps = 75/436 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F GG +IGM+ + + +DCG+ ++P +D P Sbjct: 4 LKFH--GGCHQIGMSCVEV----IGEKDRVFLDCGMMPDTGEIPKIDDNAP--------- 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGL----------LEAKRVYERV 114 + ++HAH DH GA+ + +Y +P L L+ E + Sbjct: 49 -----LIVSHAHLDHCGAIPF----YNFKKIYCTPPTADLMFITWRDTLNLQKSFKEEDI 99 Query: 115 SKKIPCISF-QAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 + + + ++ +G + H I + ++ + I++TGD Sbjct: 100 QRALSSVECLNYYEEKKIGENLKFKLYNAGH-ILGSSSIYLEIDGKRILYTGDINESMQR 158 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAM----REGTCISEKGIKKNIYDIMKNAKGCV 228 + + I L+ ++T + + E+ + + + ++ + Sbjct: 159 TV-------RAADTDIDDIDILIIEATYGSPLDIKPARKVLERELVNEVKETIERGGKVI 211 Query: 229 L----------VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII---- 274 + + ++ R + G I L + + + Sbjct: 212 IPVFAVGRAQEILLVLNNYIRSGELEAKIFTDGSLIHATSIYLSYTDWLNPKLKNLIETG 271 Query: 275 -KKDQLFLSDESFGLYPREQLIVIATGS---QGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + ++ +++ VI + S QG P +L + + L Sbjct: 272 INPFGNVEKADESRIFKKDEPCVIVSTSGMVQGGPVLKYLRLLKDPKNKLILTGYQAEGT 331 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLV 389 RA+ I KN++ +G V + S H N L R + I +P+ + Sbjct: 332 LGRALEEGIKEIKPFKNKIPIRGEVV-------KIEFSAHGDYNSLVRYIKKIPKPEKAI 384 Query: 390 AIHGEPLHLVAHKELA 405 +HGE +A Sbjct: 385 VMHGERYQSLAFAMTI 400 >gi|66910826|gb|AAH97815.1| LOC733261 protein [Xenopus laevis] Length = 526 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHYG L P+Y S L++ K E + + Sbjct: 210 AYFLTHFHSDHYGG---LTKKFRFPIYCSKITGNLVQNKLRVE----SEFINTLPMNTEC 262 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + L+ R P +++HTGD++ D +S A+ Sbjct: 263 VVNGIRVVLLEANH-CPGAVLLLFRLPNGTSVLHTGDFRADRSM--------ESYPALIG 313 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG---CVLVTTFSSSVSRIRSIID 245 + + L D+T E T ++ + +I C LV + SV + + + Sbjct: 314 QRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFEMVTLYPCTLVVCGTYSVGKEKVFLA 373 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ + + + +D L + L ++ +G Sbjct: 374 IADVLGCKV-CMSQDKYKTMQCLES-----EDIRSLVTTDWHSTALHVLPMMQVNFKG-L 426 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + R + S + + + + + + Sbjct: 427 NVHLGKFPGKYDRVLAFKPTGWTYSDSSVL-------------VADIKPEIRGKVTVYGI 473 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++LKR QW++PQ ++ Sbjct: 474 PYSEHSSYSELKRFVQWLKPQKIIPT 499 >gi|218902905|ref|YP_002450739.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|218539616|gb|ACK92014.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 419 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 58/446 (13%), Positives = 138/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER--------------- 113 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYSDQ 112 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 113 NIKDLNYVYVDEISNPNEWIQITPSLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + +L I + D+ + + + +I + + Sbjct: 173 SNILQ------ANLPEKLRGDIKVAIVDAAY--HTDDVSQHERVNELCAEIERATGQKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + +++ + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYKKYKELPIIVDQEILDGFEEMIVYKDWIKNNEELEELLESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNVIVMDDDSGTQYSFGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|153791623|ref|NP_001093331.1| hypothetical protein LOC733261 [Xenopus laevis] gi|148922160|gb|AAI46633.1| LOC733261 protein [Xenopus laevis] Length = 932 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 113/326 (34%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHYG L P+Y S L++ K E + + Sbjct: 616 AYFLTHFHSDHYGG---LTKKFRFPIYCSKITGNLVQNKLRVE----SEFINTLPMNTEC 668 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + L+ R P +++HTGD++ D +S A+ Sbjct: 669 VVNGIRVVLLEANH-CPGAVLLLFRLPNGTSVLHTGDFRADRSM--------ESYPALIG 719 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG---CVLVTTFSSSVSRIRSIID 245 + + L D+T E T ++ + +I LV + SV + + + Sbjct: 720 QRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFETVTLYPRTLVVCGTYSVGKEKVFLA 779 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ + + + +D L + L ++ +G Sbjct: 780 IADVLGCKV-CMSQDKYKTMQCLES-----EDIRSLVTTDWHSTALHVLPMMQVNFKG-L 832 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + R + S + + + + + + Sbjct: 833 NVHLGKFPGKYDRVLAFKPTGWTYSDSSVL-------------VADIKPEIRGKVTVYGI 879 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++LKR QW++PQ ++ Sbjct: 880 PYSEHSSYSELKRFVQWLKPQKIIPT 905 >gi|30261795|ref|NP_844172.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47527029|ref|YP_018378.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229600379|ref|YP_002866181.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|30256023|gb|AAP25658.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47502177|gb|AAT30853.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229264787|gb|ACQ46424.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 419 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 7 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LE 52 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 53 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 112 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 113 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 173 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQRERVNELCTEIERAAGNKGI 224 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 225 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 285 KRNIIVMDDDGGTQHSCGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 338 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 339 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 390 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 391 EDTDRLQKKLSTAGYENVYSLTMERI 416 >gi|289551861|ref|YP_003472765.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus lugdunensis HKU09-01] gi|289181392|gb|ADC88637.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus lugdunensis HKU09-01] Length = 260 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + +L I +TH H DH L L Sbjct: 15 VESEKGSLLVDVGLTGKKMENL--------FSQIDRNISDLNGILVTHEHSDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 H+P+YA+ ++E K + F + + F IES V+H + Sbjct: 67 ARKYHLPIYANEKTWKMIEKK---DNKIPMEQKFIFNPYETKSIAGFDIESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|154500576|ref|ZP_02038614.1| hypothetical protein BACCAP_04249 [Bacteroides capillosus ATCC 29799] gi|150270465|gb|EDM97774.1| hypothetical protein BACCAP_04249 [Bacteroides capillosus ATCC 29799] Length = 531 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 73/480 (15%), Positives = 146/480 (30%), Gaps = 100/480 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G + + G K I++DCG+ +D+ D + + Sbjct: 1 MKLTFF--GAAKAVTGSCHCVECG----GKRILVDCGLQQGRDEQ--------DNSRLDF 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 + A+ +THAH DH G L L P+Y + LL ++ Sbjct: 47 TPGYIDAVVVTHAHIDHSGRLPLLVKQGFDGPIYCTRLTAQLLSIMLRDSAHIQESDAQW 106 Query: 119 ---------------------------PCISFQAGDKVDV--GAFSIESVRVNHSIPETM 149 +S + G ++D+ G + H + + Sbjct: 107 ENQKGKRAGRPPVEPLYTLEDAELTLKQLVSCEYGQELDMIPGTAKLRFTDAGH-LLGSA 165 Query: 150 ALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 ++ + IV +GD D I+ D + ++ +ST R Sbjct: 166 SVELWLTEEGQTRKIVFSGDIGNHDQPIIR---DPQYIQE-----ADYVLTESTYGDRLH 217 Query: 206 TCISE-KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----------GRKI 254 E K I D G V++ +F+ V R + ++ +I ++ Sbjct: 218 QGKGEYKEELAAIIDRTLGRGGNVVIPSFA--VGRTQELLYFIREIKEENLAPNAPNFQV 275 Query: 255 VLL---GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI-------ATGSQGE 304 + R + G + ++ L + + L+ L ++ A + Sbjct: 276 CVDSPLAREATR-IFSGDLHGYLDEEALEVVRDGEALFTFPGLTLVESSEESKALNADKT 334 Query: 305 PRSALAQLSRGE------MRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 P+ ++ + L + TVIF G + E + Sbjct: 335 PKVIISASGMCDAGRIRHHLKHNLWRSECTVIFVGYQAEG--SLGRRLLEGAHEVKLFGE 392 Query: 358 AEDAECPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 + +S H N L + RP+ + +HG+ + ++G + Sbjct: 393 TIAVNAEITQCHGLSSHADRNGLLAWINYYNPRPKEVFVVHGDSEVTEIYANTLREQGFS 452 >gi|296107847|ref|YP_003619548.1| metallo-beta-lactamase family protein [Legionella pneumophila 2300/99 Alcoy] gi|295649749|gb|ADG25596.1| metallo-beta-lactamase family protein [Legionella pneumophila 2300/99 Alcoy] Length = 452 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 141/445 (31%), Gaps = 74/445 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L S+ K I++DCG+ F +L + + ++ Sbjct: 1 MKLSF--LGATGTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLLV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERV 114 K++ A+ +THAH DH G L L +YA+ L R Sbjct: 50 SPKSIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATGATTDLCSILLPDSGFLHEEDARR 109 Query: 115 SKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMAL 151 + K + + I R H I + + Sbjct: 110 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLMDDCEISWHRAGH-ILGSAFI 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 169 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKSTDYLVIESTYGNRLHDKTDPL 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VL+ F+ V R ++++ + + I + L + A Sbjct: 221 AFIANIVNTTCQRGGTVLIPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDA 278 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + G + + + + + G Sbjct: 279 TELLLKHHNEHRLSAEECRAVCQIATYVHTPNESMAVDWGRESKIIISASGMMTGGRVLH 338 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 339 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSIKIHGDDYPVRAQVAMLTNASAHADY 398 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 ++ + P+ + HGEP Sbjct: 399 EEILVWLKHFEKAPKEVFITHGEPQ 423 >gi|65319072|ref|ZP_00392031.1| COG1782: Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Bacillus anthracis str. A2012] Length = 420 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 60/446 (13%), Positives = 137/446 (30%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 8 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LE 53 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+F++H HEDH L L + ++ + + L A R Sbjct: 54 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNVTQGWNVPYNDQ 113 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + ++ ++ + ++GD+ + Sbjct: 114 NVKDLNYIYVDEISNPNEWIQITPTLRFQWGYSGHVLGSVWFLVDMSHTYVFYSGDYSAE 173 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + + +I + A + Sbjct: 174 SNIL------RANLPEKLRGDIKVAIVDAAY--HTDDVSQRERVNELCTEIERAAGNKGI 225 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + L + ++ Sbjct: 226 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFLYKDWIKNNKELEELMESL 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 286 KRNIIVMDDDGGTQHSCGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 339 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ R+ E V H D+K M + P+ V +H Sbjct: 340 KGSF--------AEKVLKERIGKECRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 391 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 EDTDRLQKKLSTAGYENVYSLTMERI 417 >gi|237734636|ref|ZP_04565117.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382456|gb|EEO32547.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 215 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 24/189 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRK-WIMIDCGVSFPKDDLPGVDLVFPDITF 60 K ++ L LG NM GY ++ID G + G +V + Sbjct: 9 KKMKIKTLLLG-------NMQTNGYVVSDENHHCLIIDPGAN-------GKKVV----HY 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKK 117 + + A+ +TH H DH GA+ L+ H P+Y + +L+ Sbjct: 51 LTENELVPEAVLLTHGHFDHIGAVDYLYEHYHCPIYLHQDDLEMLDNPQLNLSVYENPFT 110 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + + +++ G F ++ + + P + + + NI+ +GD D Sbjct: 111 VKAPVQSSHEEMKFGDFDVQWLHLPGHCPGSSMIYL--KDENIIFSGDVLFKGSIGRFDF 168 Query: 178 TDKDSLCAI 186 + I Sbjct: 169 PNSSKYETI 177 >gi|281351872|gb|EFB27456.1| hypothetical protein PANDA_012399 [Ailuropoda melanoleuca] Length = 648 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 51/427 (11%), Positives = 119/427 (27%), Gaps = 61/427 (14%) Query: 37 IDCGVSFPKDDL---PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--L 91 +DCG+ + + P +DL+ P + + I+H H DH GAL Sbjct: 3 LDCGIHPGLEGMDALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTSF 53 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGAF 134 + + + I + + +V Sbjct: 54 KGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGI 113 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 H + +I +++TGD+ +D L I N L Sbjct: 114 KFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDIL 165 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---- 250 + +ST E+ + + ++ R + ++ I ++ Sbjct: 166 IIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNH 224 Query: 251 ---GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE-- 304 + SSL + + D++ + + + + + + Sbjct: 225 PELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDI 284 Query: 305 --------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGV 354 P + LSR + +++ VI + + G + + + G Sbjct: 285 GPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQ 344 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACV 413 ++ + + + S H + ++P ++ +HGE L + Sbjct: 345 KLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDE 404 Query: 414 PPVRNGK 420 + Sbjct: 405 VHIEVHN 411 >gi|253998996|ref|YP_003051059.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|253985675|gb|ACT50532.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] Length = 451 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 63/449 (14%), Positives = 130/449 (28%), Gaps = 86/449 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L S K +++DCG+ F + + + Sbjct: 1 MKITFLGATGTVTGSKYLI----TSGSKRVLVDCGL-FQGLKQL----RLKNWARLPIDP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L + VY S L E R + Sbjct: 52 ASIDAVVLTHAHIDHTGYLPLLVKNGFNGRVYCSSATRDLCEIMLPDSAHLQEEEARYAN 111 Query: 117 KIPCISFQAGDKVDVG-----------------------AFSIESVRVNHSIPETMALVI 153 K + +I+ H I +++ Sbjct: 112 KRGFSKHNPALPLYTQEDAARAVALLTPVELEETVEVVPGVTIKLSPAGH-ILGASLVLL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +I+ +GD + D L L+ +ST R + Sbjct: 171 KDSETSILFSGDLG--------RMNDPLMLPPTPVAEADYLVVESTYGDRLHDQSTPDER 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK-----IVLLGSS-------- 260 I + +G +LV F+ V R + ++ ++ ++ I + +S Sbjct: 223 LAEIINRTARRRGVLLVPVFA--VGRAQELLYYIHKLKKQGLIPDIPVYLNSPMAVDATD 280 Query: 261 --LKR------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 ++ + ++ + + + +I++A + + Sbjct: 281 IFMRHAGEHKLNATECREIMQTARMVNSVEESQALNEINHPVIILAASGMASGGRVVHHI 340 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVS 368 + ++T++F+ G + N + V S Sbjct: 341 -----KAFGPDPRNTILFAGYQAAG--TRGAAMINGATSVKIHGGYVPINAEVEFISSFS 393 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 H N++ P+ HGEP Sbjct: 394 AHADYNEILHWLDNFSAPPKRTFITHGEP 422 >gi|254286264|ref|ZP_04961223.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150423679|gb|EDN15621.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 438 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 128/439 (29%), Gaps = 82/439 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + + ++IDCG+ D+ P + ++ A+ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGLFQGADERPLA---------VEFALGHVDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC----- 120 +THAH DH G L L + P+Y + L+ +S K Sbjct: 54 ILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERVLTE 113 Query: 121 -----ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 V + H I + + IR P +V +GD Sbjct: 114 VRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDLGPS 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KG 226 +L D + L ++T ++ + + + + +++ + G Sbjct: 173 HTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTDGG 222 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 +L+ FS V R + ++ EQ I+L +RV + + Sbjct: 223 AILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWGRE 280 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR----- 333 + + + + R S GE V A Sbjct: 281 AKSRLQIHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYLKA 340 Query: 334 ---------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPNDLK 377 + G E +G E + +H S H DL Sbjct: 341 LLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKADLL 400 Query: 378 RMYQWI--RPQVLVAIHGE 394 R I +P+ + IHGE Sbjct: 401 RFITGIPEKPKQVHLIHGE 419 >gi|302670969|ref|YP_003830929.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302395442|gb|ADL34347.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 265 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 13/161 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S I+ID GVS + + G++ + +L AIF+TH H Sbjct: 12 GNCTYIG----SDNTHILIDAGVSKKRIEQ-GLNE-------LELSLSDLDAIFVTHEHV 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH ALH + +P+YA+ I + + I+ A V VG I Sbjct: 60 DHIAALHTILKKYDIPIYATNGTIEGIRNS-DKKGEMTDSRFITVCADKMVTVGDMMINP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + ++H E + I D D + + D Sbjct: 119 MTISHDANEPCGYRVFCGDKKIGVATDLGCYTDYTVDCLRD 159 >gi|229178196|ref|ZP_04305567.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus 172560W] gi|228605326|gb|EEK62776.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus 172560W] Length = 417 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 54/446 (12%), Positives = 133/446 (29%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ ++ P ++ V P L Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYENSYPKIEGEVVPF----------LD 50 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------ 113 A+F++H HEDH L L + ++ + + L K Sbjct: 51 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWKLPYRDQ 110 Query: 114 ----VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++ + + + + + + ++ + ++GD+ + Sbjct: 111 HIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + + +I + + + Sbjct: 171 SNIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVMQNEGI 222 Query: 230 VTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + + + Sbjct: 223 ALLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKGWIKNNEELKWIMESL 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 283 KRNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIA 336 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G+ V + V H D+K M + P+ V +H Sbjct: 337 KGSF--------AEKVMKEHVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALK 388 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 389 EDTDRLQQKLSTAGYENVYSLAMERI 414 >gi|15807737|ref|NP_285392.1| cleavage and polyadenylation specificity factor-like protein [Deinococcus radiodurans R1] gi|6460540|gb|AAF12246.1|AE001862_72 cleavage and polyadenylation specificity factor-related protein [Deinococcus radiodurans R1] Length = 499 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 71/485 (14%), Positives = 138/485 (28%), Gaps = 120/485 (24%) Query: 18 GMNMALYG--YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-------- 67 G + G + + +++DCG+ D+L + R Sbjct: 20 GAACTVTGSMHLLTLGGRHLLVDCGLFQGGDEL--------------ERRNRESFPFEPA 65 Query: 68 -LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR---------------- 109 L A+ +THAH DH G L L PVY +P L E Sbjct: 66 SLDAVLLTHAHLDHVGRLPLLVRLGYRGPVYCTPPTAALAETVLLDSARLQVEGYRQDLR 125 Query: 110 ------VYERVSKKIPCISF------------QAGDKVDVGAFSIESVRVNHSIPETMAL 151 + V + + G+ V V + R H I + L Sbjct: 126 RARRQGREDEVPPPLYDEEDVHRTLALLRPQLEFGETVTVAGVRVTPQRAGH-ILGSAYL 184 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 ++ +P G ++ +GD + + D T + A++ ++T A R E Sbjct: 185 LLEAPEGRLLMSGDLGNRESGLQLDFT--------PPPAVDAVVIETTYANRTHRGWVET 236 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--------------------- 248 + + D ++ G +L+ +F+ + R ++I+ + Sbjct: 237 RAEFAQALRDSVRQ-NGKILIPSFA--IERAQTILHTLKEMMDSGEVPRIPVFLDSPMAA 293 Query: 249 -------QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG- 300 + G +++ R + + Y +I+ G Sbjct: 294 RATNEYFEYGDELIPPVREALRNGEDPFRPSTLHTVTTSAESQRLNRYDGPAIIMAGNGM 353 Query: 301 -SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIG-----HIKNRLVEQGV 354 + G + L + K + ++ + H+ V Sbjct: 354 MTGGRIQHHL------KHHLWKPSTSLIIVSYQSPSSLGGRIVAGQGTVHLMGEDVAVRA 407 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 +V S H +DL + +HGE + A L + G+ Sbjct: 408 QVHTIGG-----FSAHADQDDLLAFLDTAGKPHVWLVHGEVNVMDAFLPLLAERGLKGDI 462 Query: 415 PVRNG 419 Sbjct: 463 VPDRS 467 >gi|75758998|ref|ZP_00739107.1| putative Zn-dependent hydrolases (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493533|gb|EAO56640.1| putative Zn-dependent hydrolases (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 436 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 51/451 (11%), Positives = 133/451 (29%), Gaps = 70/451 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKE 64 + GG GE G + Y + I+ DCG++ + P ++ + Sbjct: 18 MRIEVWGGAGEYGRSC----YFVKNKETKILFDCGINRSYEKSYPEIE---------REA 64 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------- 113 L A+F++H HEDH L L + ++ + + L K Sbjct: 65 VPFLDAVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNL 124 Query: 114 ---------VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 ++ + + + + + + ++ + ++G Sbjct: 125 PYSDQHIKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDLCNTYVFYSG 184 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D+ + + + + +L I + D+ + + +I + Sbjct: 185 DYSAESNIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVM 236 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAID 270 + + + R + I+ + G + + + + Sbjct: 237 QNKGIALLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKDWIKNNEELKW 296 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + K + + D + ++V++ + R+ L ++ ++++VIF Sbjct: 297 IMESLKRNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLC------YEQLRNEKRNSVIF 350 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + G+ V + V H ++K M + P+ V Sbjct: 351 TGHIAKGSF--------AERVMKEHVRSTCRVKRVPYKVHQSIKEVKEMLNTLLPEHTVL 402 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 +H ++ G V + ++ Sbjct: 403 VHALKEDTDRLQQKLSTAGYENVYSLAMERI 433 >gi|269965948|ref|ZP_06180041.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269829501|gb|EEZ83742.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 438 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 70/452 (15%), Positives = 136/452 (30%), Gaps = 78/452 (17%) Query: 18 GMNM-ALYGYGSPSSRKWIMIDCGVSFPKD----DLPGVDLVFPDITFIMKERKNLMAIF 72 G N + ++IDCG+ +D + +D D L A+ Sbjct: 8 GKNTVTGSCHELVLQNGSVLIDCGLLQGQDNVQQESLHIDFSISD----------LKAVV 57 Query: 73 ITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYERVSKK------ 117 +TH+H DH G L L + P+Y + L L+ + R + Sbjct: 58 LTHSHIDHVGRLPWLLAAGYKGPIYCTEATAELVPLMLEDGLKLQLGMRRHQRDSLLDFT 117 Query: 118 -IPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 +++ + H + S +V +GD + +L Sbjct: 118 RTLIRPCAYSQWIEIEEHTYLRFQPAGHILGSAYVEFHLSNNEVVVFSGDLGPRNTPLLP 177 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D + E L +ST + + + ++ + I + ++ + Sbjct: 178 DP--------VSPEKADYLFIESTYGNKVHEDVESRS-RRLLSIIEHALQDGGVIVIPAF 228 Query: 236 SVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 SV R + I + A Q I+L K+V + + + Sbjct: 229 SVGRTQELLFDIEQLIHEHALQDSLPIILDSPLAKKVTTTYRQFKKLWGAEAK-ERLEHH 287 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSR--------------------GEMRNVKLAEKDT 327 +P I S + + +L+ + + +++ Sbjct: 288 RHPLAFDQCITVESHTDHLKLVNRLASTAEAAIVVAASGMCEGGRVVNYLEALLPDKRND 347 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPNDLKRMYQWI 383 V+F+ G I++ + E VH S H +DL + I Sbjct: 348 VLFAGYQAEG--TLGRRIQDGEENILIEGRRVRVEAQVHTMSGYSAHADRDDLIQFVSGI 405 Query: 384 --RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 P+ + IHGE + + + G CV Sbjct: 406 STPPKEVHLIHGEQASKRSLYQQLITLGYNCV 437 >gi|182414994|ref|YP_001820060.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177842208|gb|ACB76460.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 452 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 139/437 (31%), Gaps = 78/437 (17%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G IG N L +G +++DCG+ K PD+T + L I IT Sbjct: 10 GGIGANSLLVQFG----DLRVLVDCGLHPKKVGR----AATPDLTLL--RGTPLDLILIT 59 Query: 75 HAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR----------VYERVSKKIPCISF 123 H H DH G+L + + PV + + L+E P + Sbjct: 60 HCHLDHIGSLPVVMREHPNTPVLMTAASRMLIERMLHNSANVMMRQRETENIPDYPLFTH 119 Query: 124 QAGDKVDVGAFS------------------IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ VG F+ I H + + IR + TGD Sbjct: 120 EEIER-CVGRFTGLAPGHVKKFRGARDEIEITFHHAGH-VAGAAGIEIRHKHRAVFFTGD 177 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK--GIKKNIYDIMKN 223 D+ L L+ ++T + E E+ + + I I Sbjct: 178 VLFDNQRTLTG-------AKFPAGHFDTLVTETTRGITERPVGKERVHEVARLIATINDA 230 Query: 224 AKGCVLVTTFSSSVSRIRS---IIDIAEQIGRKIVL------LGSSLKRVVS-VAIDVGI 273 + + ++ R++ I+ A + GR + LG L + Sbjct: 231 IQRGGSLLLPVFALGRMQEVLAILHDARKFGRLVDCPIYASGLGMDLADYFDEITRKTKT 290 Query: 274 IKKDQLFLSDESFGLYPRE----------QLIVIATGSQ--GEPRSALAQLSRGEMRNVK 321 ++ ++ + D PR+ L V+++G P LA G RN Sbjct: 291 LQFNRSLVKDLKIKPLPRKLNPGEDPQQRSLYVVSSGMMVAQTPSYLLASGLLGHARNTI 350 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC--PVHVSGHPYPNDLKRM 379 V + PG ++ + V + + + + +SGH +L Sbjct: 351 A----FVGYCDPDTPGGQLLAARPGDDFVFESIPLKTKVKAHIERFELSGHADREELLEF 406 Query: 380 YQWIRPQVLVAIHGEPL 396 + +V HG+P Sbjct: 407 AVQTEARSIVLTHGDPP 423 >gi|269963714|ref|ZP_06178034.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831555|gb|EEZ85694.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 446 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 90/267 (33%), Gaps = 35/267 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N+ GG + + + +++DCG+ F D D D Sbjct: 1 MSNKPFEVKHHGGKHSVTGSC----HELMLPSGSVLVDCGL-FQGKDARIADKT--DTHK 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-----ERV 114 I + A+ +THAH DH G L L +Y + L+ + Sbjct: 54 IEFSIHRVKAVVLTHAHIDHIGRLPWLLLAGYKGKIYCTMATAELVPLMLEDGLKLQFGL 113 Query: 115 SK----------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHT 163 +K + + + + + R I + + + P +V + Sbjct: 114 NKSQREQILNLIRSRLVRCDYNTWIPLKGLAYLRFRPAGHILGSSYVEFKLPNGELVVFS 173 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + +L D + L +ST + +S + + ++DI+ + Sbjct: 174 GDLGPKNTPLLPDPVSPNR--------ADYLFIESTYGDKHHENVSNRS--QRLFDILNH 223 Query: 224 A-KGCVLVTTFSSSVSRIRSIIDIAEQ 249 A + ++ + SV R + ++ EQ Sbjct: 224 ALQDGGVIVIPAFSVGRTQELLFDIEQ 250 >gi|291302591|ref|YP_003513869.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290571811|gb|ADD44776.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 577 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 91/463 (19%), Positives = 148/463 (31%), Gaps = 77/463 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD---LVFPDITFIMKERKN 67 LGG EIG + L +++D G P GVD L DI + Sbjct: 141 LGGGTEIGGSCVLI----TGGGTRLLVDAGTR-PS----GVDEDSLAPADIA--EVYAEP 189 Query: 68 LMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 AI +THAH DH G + L + ++PV+AS LL AK + + Sbjct: 190 PDAIVVTHAHNDHAGWVPALVNRFPNLPVFASTATCDLLGTMWADSAKVLAFKADTDESW 249 Query: 121 --------------------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 I G VGA S E H I +V+ + + Sbjct: 250 AGGPLPPYKQSDVDAAVAALIDVPVGHPRRVGALSFELFDAGH-IIGATGVVVTAGDQRV 308 Query: 161 VHTGDWK--LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 V +GD + D G L+ +ST A E I + + Sbjct: 309 VVSGDVSGPGQLSVGGLHLPD-------AGVGADLLLLESTYAGAGKLPPREAVIDQFVS 361 Query: 219 DI--MKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--GRKIVLLGSSLKRVVSVAIDVGII 274 D+ + A G VLV F+ + R + I I + ++++ G + R +S A Sbjct: 362 DVDRILGAGGRVLVPAFA--LGRAQEIALICGRHLPDAEVLVDG--MARDLSHAYR-RHD 416 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-------GEMRNVKLAEKDT 327 D + S + P E + P +A G R + + Sbjct: 417 GPDGERVQVFSGRVRPVEPGRTRREIADKRPCVVVATSGMLSGGPAVGWAREILTEPESG 476 Query: 328 VIFSSR---AIPGNEVAIGHIKNRLV----EQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 ++ PG+ + + + H +DL ++ Sbjct: 477 LMVVGYQDADSPGSRLLGLAAAGGGRFDLPGMNEPIEVSAHIGNYRLGAHASEDDLVKIA 536 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 RPQ L+ +HG L A + A + + + + Sbjct: 537 AEARPQTLMLVHGR---LAAQRRFADRLRLRQQKVILADRPWS 576 >gi|329728492|gb|EGG64928.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU144] Length = 266 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 21 VESEKGSLLVDVGLTVKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F IES V+H + Sbjct: 73 ARKYKLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSLAGFDIESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|156447655|gb|ABU63624.1| YycJ [Staphylococcus lugdunensis] gi|156447663|gb|ABU63631.1| YycJ [Staphylococcus lugdunensis] gi|156447671|gb|ABU63638.1| YycJ [Staphylococcus lugdunensis] gi|156447679|gb|ABU63645.1| YycJ [Staphylococcus lugdunensis] gi|156447687|gb|ABU63652.1| YycJ [Staphylococcus lugdunensis] Length = 266 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + +L I +TH H DH L L Sbjct: 21 VESEKGSLLVDVGLTGKKMENL--------FSQIDRNISDLNGILVTHEHSDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 H+P+YA+ ++E K + F + + F IES V+H + Sbjct: 73 ARKYHLPIYANEKTWKMIEKK---DNKIPMEQKFIFNPYETKSIAGFDIESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|315659968|ref|ZP_07912826.1| metallo-beta-lactamase YycJ [Staphylococcus lugdunensis M23590] gi|315494869|gb|EFU83206.1| metallo-beta-lactamase YycJ [Staphylococcus lugdunensis M23590] Length = 266 Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + +L I +TH H DH L L Sbjct: 21 VESEKGSLLVDVGLTGKKMENL--------FSQIDRNISDLNGILVTHEHSDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 H+P+YA+ ++E K + F + + F IES V+H + Sbjct: 73 ARKYHLPIYANEKTWKMIEKK---DNKIPMEQKFIFNPYETKSIAGFDIESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|196229668|ref|ZP_03128532.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196225994|gb|EDY20500.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 284 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 74/228 (32%), Gaps = 55/228 (24%) Query: 16 EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD--LVFPDITFIMKERKNLMAIFI 73 EIG N Y + K I++D G+ P D PD + + AI + Sbjct: 14 EIGANC----YCLDLAGKRIVLDSGL------HPRFDGTAALPDFSRLPDGTA--DAIIL 61 Query: 74 THAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVYERVSKKIPCIS 122 +HAH+DH G++ L PV+ + L + K+ E +++ Sbjct: 62 SHAHQDHVGSMPVLMRRQPQAPVFMTEATRLLSDVMLHNSVNVMTKKRDEGITEYPLFTH 121 Query: 123 FQAGDKVDVG----------------------AFSIESVRVNHSIPETMALVIRSPVGNI 160 + S E H I ++ +IR+ I Sbjct: 122 REVDVAFKRWRPVPLHTRFDVTGERLLPSEDAELSFEFFDAGH-ILGSVGTLIRAQGRKI 180 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +TGD + DD I+ E + L+ ++T R Sbjct: 181 FYTGDVQFDDQTIMQG-------AQFPEEELDVLIIETTRGDRATPEG 221 >gi|168702845|ref|ZP_02735122.1| hypothetical protein GobsU_25171 [Gemmata obscuriglobus UQM 2246] Length = 476 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 86/267 (32%), Gaps = 41/267 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMA 70 G G + +M L G I++DCG+ + ++ + FP + A Sbjct: 20 GAAGGVTGSMHLIETG----NHKILLDCGLHQGRREEARQRNGHFPF------HAHQIDA 69 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE---RVSKKIPC 120 + ++HAH DH G L L P+Y +P LL AK E ++ Sbjct: 70 VIVSHAHIDHCGNLPTLIRQGFDGPIYCTPPTRDLLRVMLADSAKIQEEDAAHINIARNY 129 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVI------------RSPVGNIVHTGDWKL 168 V R+ S+P + +VH Sbjct: 130 AEPWVQPLYTVHDVEKVFTRLV-SVPYGREADVTKTVRFRFIEAGHVLGSAMVHATIAAP 188 Query: 169 DDDAILGDVTDKDS--LCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 D D L D L + G L+C+ST R +E + K I Sbjct: 189 DRDRTLTFSGDMGRRGLPILKPTGAVPPADVLVCESTYGNRLHRSFAE-TVTKLYAAIRD 247 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + V + S+ R + II + +Q Sbjct: 248 TVERGGKVLVPAFSLGRTQLIIHVLQQ 274 >gi|118477221|ref|YP_894372.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118416446|gb|ABK84865.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] Length = 436 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 59/446 (13%), Positives = 141/446 (31%), Gaps = 72/446 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDL-VFPDITFIMKERKNLM 69 GG GE G + Y + I+ DCG++ +D P ++ V P L Sbjct: 24 GGAGEYGRSC----YFVKNKETKILFDCGINRSYEDSYPKIEREVVPF----------LD 69 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---KRVYERVSKKIP------ 119 A+F++H HEDH L L + ++ + + L A K +++ Sbjct: 70 AVFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPAYYEKWRNYNLAQGWHLPYNDQ 129 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + + + + ++ + ++GD+ + Sbjct: 130 NVTDLNYVYIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMSHTYVFYSGDYSAE 189 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + + + +L I + D+ + E+ + + +I + A + Sbjct: 190 SNIL------RANLPEKLRGDIKVAIVDAAY-HTDDVSQYER-VNELCTEIERAAGNKGV 241 Query: 230 VTTFSSSVSRIRSIIDIAEQI--------------GRKIVLLGSSLKRVVSVAIDVGIIK 275 + R + I+ + G + + + ++ Sbjct: 242 ALLPLPPLGRAQDIVLYLYEKYKEFPIIVDQEILDGFDEMFVYKDWIKKNKELEELMESL 301 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 K + + D+ G ++V++ + R+ L ++ E++++IF+ Sbjct: 302 KRNIIVMDDDGGTQHSYGIVVMSDANMQTKRAQLY------YEQIRHEERNSIIFTGHVA 355 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 G + + + RV H D+K M + P+ V +H Sbjct: 356 KG--SFAEKVLKERIGKECRVKQVP------YKVHQSIRDVKAMLNALLPEHTVLVHALK 407 Query: 396 LHLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 408 EDTDRLQKKLSTAGYENVYSLTMERI 433 >gi|7595835|gb|AAF64472.1|AF241240_1 SNM1 protein [Mus musculus] Length = 1023 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 103/326 (31%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K + I D Sbjct: 710 AYFLTHFHSDHYAG---LSKDFTRPVYCSEITGNLLKKKLRVQE-----QYIRQLPMDTE 761 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + P ++ + P I+HTGD++ D + Sbjct: 762 CVVDSVKVVFVDANHCPGATMILFQLPNGAVILHTGDFRADPSMER---------SRLAG 812 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + + + + + Sbjct: 813 RKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLA 872 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 873 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEVSSLITTDMC----DSLVHL 914 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + + Sbjct: 915 LPMMQINFKGLQSHLKKCGGKYDQILAFRPTGW--THSNNITSTADIIPQTRGNISIYGI 972 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 973 PYSEHSSYLEMKRFVQWLKPQKIIPT 998 >gi|91226602|ref|ZP_01261326.1| hypothetical protein V12G01_11598 [Vibrio alginolyticus 12G01] gi|91189076|gb|EAS75358.1| hypothetical protein V12G01_11598 [Vibrio alginolyticus 12G01] Length = 438 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 70/452 (15%), Positives = 136/452 (30%), Gaps = 78/452 (17%) Query: 18 GMNM-ALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFIMKERKNLMAIF 72 G N + ++IDCG+ +D+ +D D L A+ Sbjct: 8 GKNTVTGSCHELVLQNGSVLIDCGLLQGQDNAQQQSLNIDFSISD----------LKAVV 57 Query: 73 ITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYERVSKK------ 117 +TH+H DH G L L + P+Y + L L+ + R ++ Sbjct: 58 LTHSHIDHVGRLPWLLAAGYKGPIYCTEATAELVPLMLEDGLKLQLGMRRHQRENVLDFI 117 Query: 118 -IPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 +++ S+ H + +V +GD + +L Sbjct: 118 RTLIRPCSYSQWIEIEEHTSLRFQPAGHILGSAYVEFHLLNNEVVVFSGDLGPRNTPLLP 177 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D + E L +ST + + + ++ + I + ++ + Sbjct: 178 DP--------VSPEKADYLFIESTYGNKVHEDVESRS-RRLLSIIEHALQDGGVIVIPAF 228 Query: 236 SVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 SV R + I + A Q I+L K+V + + + Sbjct: 229 SVGRTQELLFDIEQLIHEHALQDSLPIILDSPLAKKVTTTYRQFKKLWGAEAK-ERLEHH 287 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK--------------------LAEKDT 327 +P I S + + +L+ + +++ Sbjct: 288 RHPLAFDQCITVESHTDHLKLVNRLASTTEAAIVVAASGMCEGGRVVNYLEALLPDKRND 347 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPNDLKRMYQWI 383 V+F+ G I++ + E VH S H +DL + I Sbjct: 348 VLFAGYQAEG--TLGRRIQDGEENILIEGRRVRVEAQVHTMSGYSAHADRDDLIQFVSGI 405 Query: 384 --RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 P+ + IHGE + + + G CV Sbjct: 406 PTPPKEVHLIHGEQESKRSLYQQLITLGYNCV 437 >gi|296221247|ref|XP_002756651.1| PREDICTED: DNA cross-link repair 1A protein [Callithrix jacchus] Length = 1046 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 109/326 (33%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 733 AYFLTHFHSDHYAG---LSKHFTFPVYCSEITGNLLKNKL----HVQEQYIHPLPLDTEC 785 Query: 130 DVGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P + ++ I+HTGD++ D + N Sbjct: 786 IVNGVKVVLLDANH-CPGAVMILFCLPNGTVILHTGDFRADPSMER---------SLLAN 835 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 836 REVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLA 895 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 896 IADVLGSKV---GMSQEKYKTL-----------QCLNIPDINSLITTDMC----SSLVHL 937 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + R+ + + + + Sbjct: 938 LPMMQINFKGLQSHLKKYGGKYDQILAFRPTGW--THSNKFTRIADVIPQTKGNISIYGI 995 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 996 PYSEHSSFLEMKRFVQWLKPQKIIPT 1021 >gi|219668813|ref|YP_002459248.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219539073|gb|ACL20812.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 570 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 73/590 (12%), Positives = 165/590 (27%), Gaps = 106/590 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y S ++IDCG+ F +L + D + L A+ +THAH DH G + Sbjct: 16 SYLVESEGYRVLIDCGL-FQGSKALK-ELNYGDFPY---NPAELNAVILTHAHTDHSGLI 70 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI------------------------- 118 L + +YA+P I L +++ Sbjct: 71 PKLIKYGFQGKIYATPETIKLCSVMLPDSGHIQEMEVERKNRKLKRASQDLLTPIYTAQD 130 Query: 119 ------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 Q + S H I + + + G + T + D Sbjct: 131 AQDSLKFFTPAQYDQSTQLSPEISFTFHDAGH-ILGSAFVQMTVKEGELEKTLVFSGDVG 189 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLV 230 + + G ++ ++T R+ + + I A G +++ Sbjct: 190 NSEQPFIENPRI----ICGGDIVIVETTYGDRQHENRANRIQHLAEIIREAHQAGGNLVI 245 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 F+ + R + ++ ++ + + V + + E+ + Sbjct: 246 PAFA--IERTQDLLFYIRKLQTE-------NEIPVMPIYVDSPLAIAATKIFQENPQNFD 296 Query: 291 REQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 +E L +I G + L+ + + + +I ++ + H+K L Sbjct: 297 QETLDMIQRGEHPLLMPNVHYSLTSEDSMAINSIQGGAIIIAASGMADAGRIKYHLKYNL 356 Query: 350 VEQGVRVIAEDAEC------------------------------PVHVSGHPYPNDLKRM 379 + V+ + +S H L Sbjct: 357 WRENATVLFVGYQAQGTLGRRIIEGAKEVTIHGEKVAVRANIRRMEGLSAHADQPQLLEW 416 Query: 380 YQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVH 437 + + ++ +HGEP + ++ + G++L I+ + + + Sbjct: 417 LSCLGEDAENIILVHGEPDVQKTFAQKIQEKFGKIPWIPQLGEVLE-----IKNREVIPY 471 Query: 438 GLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFGVPEIVDIGIPAYDGDG 497 +I A R+ ++ G + P + G Sbjct: 472 PPSKPWLQVIEAEAQQASETRQAMAHGGAEVAQL-----------PTL-SRGKSGQAKIT 519 Query: 498 GKIHKLLLKTVITTVVDLPQFRRKDLKLLRE--SISSALRSLLKKVWGKK 545 ++ + + L R+ L ++ + L + KK Sbjct: 520 QAQINRAMQRLRHRLKVLVDNGRRS-NNLEHTLAVIDTITRWLDDMDNKK 568 >gi|297737628|emb|CBI26829.3| unnamed protein product [Vitis vinifera] Length = 686 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 13/93 (13%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---N 67 LG E+G + A+ + K IM DCG+ D FPD + I K Sbjct: 8 LGAGQEVGKSCAVV----TINGKRIMFDCGMHMGYLDH----RRFPDFSLISKSADFNTA 59 Query: 68 LMAIFITHAHEDHYGALHDLWSF--LHVPVYAS 98 + I ITH H DH GAL P+Y + Sbjct: 60 IDCIVITHFHLDHVGALPYFTEVCGYSGPIYMT 92 >gi|149376810|ref|ZP_01894567.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Marinobacter algicola DG893] gi|149358931|gb|EDM47398.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Marinobacter algicola DG893] Length = 453 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 134/454 (29%), Gaps = 94/454 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIM 62 +L F LG G + + Y + +++DCG+ GV +L + Sbjct: 1 MKLKF--LGAAGTVTGS----RYLLSDDKHRLLVDCGM------YQGVKNLRKRNWAPFP 48 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--------------- 106 E ++ A+ +THAH DH G L L +Y + L + Sbjct: 49 VEPSSINAVVLTHAHIDHTGYLPALVKNGFKGKIYCTKATHELCKVLLPDAGYLQEEDAK 108 Query: 107 ---AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIESVRVNHSIPETMA 150 K + + A + + V + H I + Sbjct: 109 YAFRKGFSKHEKPEPLFTVKDAQEALKHFESLHYHERFEPVKGMEVTFTPAGH-ILGSSC 167 Query: 151 LVIRSP--VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TC 207 + + +V +GD +D I+ + L+C+ST R Sbjct: 168 VHVHHRGSDRTVVFSGDVGRQNDVIMRPP--------EPIQKADVLVCESTYGDRLHAES 219 Query: 208 ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSS 260 E + + I A +V S +V R + ++ + +I + L Sbjct: 220 DPESELAEIITKT---AGRGGIVLMPSFAVGRAQMLLYLIHKIMAESRVPKMPVYLNSPM 276 Query: 261 LKRVVSVAIDVGIIKK--------------DQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + + K + + R I+I+ Sbjct: 277 AIKATEIFSRHHKEHKLSAAQCEMIDENTEFVRTVDESIELNSVRYPCIIISASGMASGG 336 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 L L + + +++V+F+ PG + N + + V+ Sbjct: 337 RVLHHL-----KTLLPNPRNSVVFAGFQAPG--TRGDALVNGADSVKIHGEYWPVKAEVY 389 Query: 367 ----VSGHPYPNDLKRMY--QWIRPQVLVAIHGE 394 +S H ++ + ++P+ + HGE Sbjct: 390 NLDSLSAHGDYEEILQWLGAGALKPEKVYITHGE 423 >gi|314934939|ref|ZP_07842298.1| metallo-beta-lactamase family protein YycJ [Staphylococcus caprae C87] gi|313652869|gb|EFS16632.1| metallo-beta-lactamase family protein YycJ [Staphylococcus caprae C87] Length = 263 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 80/238 (33%), Gaps = 25/238 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N S + +++D G++ K + + I + Sbjct: 3 RMSVLASGSTG----NATYVE----SEKGSLLVDVGLTGKKMEEL--------FSQIDRN 46 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K+L I +TH H DH L L ++P+YA+ +E K + F+ Sbjct: 47 IKDLNGILVTHEHIDHIKGLGVLARKYNLPIYANENTWKAIEKK---DSRIPMDQKFIFK 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 + + F IES V+H + + + D + D + +D Sbjct: 104 PYETKSIAGFDIESYNVSHDAIDPQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFM 163 Query: 183 LCAIGNEGILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +L + + + +S + + D++ + ++ S Sbjct: 164 FESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 221 >gi|313201101|ref|YP_004039759.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|312440417|gb|ADQ84523.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 451 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 63/449 (14%), Positives = 129/449 (28%), Gaps = 86/449 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L S K +++DCG+ F + + + Sbjct: 1 MKITFLGATGTVTGSKYLI----TSGSKRVLVDCGL-FQGLKQL----RLKNWARLPIDP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 ++ A+ +THAH DH G L L + VY S L E R + Sbjct: 52 ASIDAVVLTHAHIDHTGYLPLLVKNGFNGRVYCSSATRDLCEIMLPDSAHLQEEEARYAN 111 Query: 117 KIPCISFQAGDKVDVG-----------------------AFSIESVRVNHSIPETMALVI 153 K + +I+ H I +++ Sbjct: 112 KRGFSKHNPALPLYTQEDAARAVALLTPVEFEETVEVVPGVTIKLSPAGH-ILGASLVLL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +I+ +GD + D L L+ +ST R Sbjct: 171 KDSETSILFSGDLG--------RMNDPLMLPPTPVAEADYLVVESTYGDRLHDQSMPDER 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK-----IVLLGSS-------- 260 I + +G +LV F+ V R + ++ ++ ++ I + +S Sbjct: 223 LAEIINRTARRRGVLLVPVFA--VGRAQELLYYIHKLKKQGLIPDIPVYLNSPMAVDATD 280 Query: 261 --LKR------VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 ++ + ++ + + + +I++A + + Sbjct: 281 IFMRHAGEHKLNATECREIMQTARMVNSVEESQALNEINHPVIILAASGMASGGRVVHHI 340 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVS 368 + ++T++F+ G + N + V S Sbjct: 341 -----KAFGPDPRNTILFAGYQAAG--TRGAAMINGATSVKIHGGYVPINAEVEFISSFS 393 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 H N++ P+ HGEP Sbjct: 394 AHADYNEILHWLDNFSAPPKRTFITHGEP 422 >gi|282859127|ref|ZP_06268254.1| metallo-beta-lactamase family protein [Prevotella bivia JCVIHMP010] gi|282588082|gb|EFB93260.1| metallo-beta-lactamase family protein [Prevotella bivia JCVIHMP010] Length = 267 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 14/173 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N L S +MIDCGV GV L+ Sbjct: 2 LNFISFG-SGSSG-NCYLL----YSDTDCLMIDCGV--------GVRLIKKYFHMYDLPL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K + I +TH H DH A+ + L +PVYA+ + R + ++ + Sbjct: 48 KMVRHIILTHDHADHVKAVGSISKDLGIPVYATSLVHKGVSVNWAVHRKIDQSLAVNIEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + + +G F++ V H + + I V D D I ++ Sbjct: 108 QETLQIGEFTVTPFNVPHDSTDCVGYSIEYGNITFVLVTDCGETTDEIRSYIS 160 >gi|308175746|ref|YP_003922451.1| hydrolase [Bacillus amyloliquefaciens DSM 7] gi|307608610|emb|CBI44981.1| putative hydrolase [Bacillus amyloliquefaciens DSM 7] gi|328555720|gb|AEB26212.1| hydrolase [Bacillus amyloliquefaciens TA208] gi|328914106|gb|AEB65702.1| putative hydrolase [Bacillus amyloliquefaciens LL3] Length = 264 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEEHSFLVDAGLS--GKAMDGL------MEQIGRKIDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +PVYA+ +E + F G +ES V+H Sbjct: 69 VIARKYGLPVYANEKTWKAMENQI---GKLDTGQKFLFPMESVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQD 222 >gi|253996210|ref|YP_003048274.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253982889|gb|ACT47747.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 453 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 87/286 (30%), Gaps = 52/286 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LG G + + Y S K I++DCG+ F + + Sbjct: 1 MELTF--LGATGTVTGS----KYLLKSGDKQILVDCGL-FQGLKQL----RLRNWAKLPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 + A+ +THAH DH G L L VY S L + Sbjct: 50 NPAQIDAVVLTHAHIDHSGYLPVLVKNGFAGKVYCSEGTADLCKIMLPDSAHLQEEEAEY 109 Query: 110 ------VYERVSKKIPCISFQAGDKVDVGAFSIES-----------VRVNHSIPETMALV 152 + + + S E + N I + + Sbjct: 110 ANRRGFSKHNPALPLYTQEDAENTLKLLMPVSFEQDVDLGDGLTLRLSPNGHILGSAFVR 169 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 I +++ +GD +D ++ + + L+ +ST R + Sbjct: 170 IHDKKTSVLFSGDIGRSNDILMRPP--------VRIKQADYLLIESTYGNRRHERDDPQV 221 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 I + + KG +++ F+ V R + ++ + + G Sbjct: 222 KLAAIINKTVSRKGVLVIPVFA--VGRAQELLYYIHLLKASCAIAG 265 >gi|330507142|ref|YP_004383570.1| hypothetical protein MCON_0998 [Methanosaeta concilii GP-6] gi|328927950|gb|AEB67752.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 517 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 110/328 (33%), Gaps = 37/328 (11%) Query: 99 PFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 L + +KK+ + D F I + V+HSI A I Sbjct: 176 ELTNFLSRRPGQDGKRAKKLEPGTCSFYDNAAY-PFEISAHPVDHSIFGATA-YILQGDT 233 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC----ISEKGIK 214 I +TGD++L D + L+ + T A R + SEK + Sbjct: 234 TIAYTGDFRL-HGRNGDATRDFVKKAKDAS----ILITEGTRAGRNDSPDNGTTSEKSVC 288 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + D + +A G ++ + + R+ S +IAE++GR++V+ + + ++A Sbjct: 289 EVCRDKVGSASGLIIADFSARNFERLESFQNIAEKMGRELVVPAKDIYMLQALACIDNAC 348 Query: 275 KKDQLFL-SDESFGLYPREQLIV------------IATGSQGEPRSALAQLSRGEMRNVK 321 K D L + S+ EQ +V + + + ++K Sbjct: 349 KMDSLRVYSEIGNKSRKWEQEVVQPLFFDQYVNHETIRENPDNFILCFSFFDMKHLLDIK 408 Query: 322 LAEKDTVIFSSRA-IPGNEVAIGHIKNRLVEQGVRV------------IAEDAECPVHVS 368 + + A E+ + + L + + H S Sbjct: 409 PNGGTYIYSACEAFSEEMEIDFVRLWHWLEHFKIDPVGFSVEKEDGGNYYPTFDKRFHAS 468 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 GH DLK + + P LV IH E Sbjct: 469 GHASREDLKWVIDQVDPDYLVPIHTESR 496 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 34/124 (27%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-----------KDDLPGV---------- 51 G IG N G +++D G +F D G+ Sbjct: 9 GANGIGGNKLYLEEGGKG----VLLDFGKNFGKYGAFYEEFLKNRDTRGIHDLIYLDLMP 64 Query: 52 -------DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGL 104 DL+ D++ N+ A+ ++HAH DH G + L +P+ ASP I + Sbjct: 65 KLNIYRPDLIPSDLSISQYPSLNVAAVLLSHAHMDHCGNIGMLRK--DIPIVASPETIVI 122 Query: 105 LEAK 108 ++ Sbjct: 123 MKGM 126 >gi|187926558|ref|YP_001892903.1| beta-lactamase domain protein [Ralstonia pickettii 12J] gi|241666068|ref|YP_002984427.1| beta-lactamase [Ralstonia pickettii 12D] gi|187728312|gb|ACD29476.1| beta-lactamase domain protein [Ralstonia pickettii 12J] gi|240868095|gb|ACS65755.1| beta-lactamase domain protein [Ralstonia pickettii 12D] Length = 454 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 79/269 (29%), Gaps = 52/269 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + + G+ +M+DCG+ F + + ++ A Sbjct: 6 LGATDTVTGSKYVLETGA----HRVMVDCGL-FQGYKSL----RLRNWDKLAVNPHHIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-VYERVSKKIPCISFQAGDK 128 + +THAH DH G L L H PVY + L R++++ + G Sbjct: 57 VVLTHAHIDHSGYLPLLVRNGFHGPVYCTKGTAELCNILLPDSARLAQEDAQYANAEGFS 116 Query: 129 VDV------------------------------GAFSIESVRVNHSIPETMALVIRSPVG 158 E R H I + + Sbjct: 117 RHHPALPLYDEKDAARALRRLHPVGYGERFSVADGVEAEFHRAGH-IIGAATATLLTEGR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 IV +GD D ++ + + L+ +ST R + + Sbjct: 176 RIVFSGDLGRQVDPVMRP---PEPIAE-----ADTLLVESTYGDRVHPEGDPLDALEQVV 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 G +L+ F+ V R + ++ Sbjct: 228 QRTIGQGGTLLIPAFA--VGRTQELLYCL 254 >gi|121593887|ref|YP_985783.1| beta-lactamase domain-containing protein [Acidovorax sp. JS42] gi|120605967|gb|ABM41707.1| beta-lactamase domain protein [Acidovorax sp. JS42] Length = 452 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 59/439 (13%), Positives = 117/439 (26%), Gaps = 76/439 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L + + +++DCG+ F + + ++ A Sbjct: 6 LGATGTVTGSKYLLRHEGAT----LLVDCGL-FQGYKQL----RLRNWAPLPVPAADIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 I +THAH DH G L L VY S L + + Sbjct: 57 IVLTHAHIDHSGYLPLLARQGFKGKVYCSEATFDLCRILLPDSGHLQEEEAEYANRHSFS 116 Query: 122 SFQAGDKVDV-------------GAFSIESVRVN---------HSIPETMALVIRSPVGN 159 + + F N + + + I + Sbjct: 117 KHKPALPLYTREDAERCLKLFAPRPFGTTWSPANGLHARLDRSGHMLGSAFVRIDDGKRS 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I+ +GD D G + +ST R ++ + Sbjct: 177 ILFSGDIG--------RPNDLVLAAPARLPGADYAVVESTYGDRAHEPGDPLTTLGDVIN 228 Query: 220 IMKNAKGCVLVTTFS-----SSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVSVAIDV 271 G V++ F+ + + I + + + L R+ D Sbjct: 229 RTAARGGTVVIPAFAVGRAQTLLYAIHLLKERGVIHHLPVYLDSPMAIDATRIYHTHRDE 288 Query: 272 GIIKKD--QLFLSDESFGLYPREQ---------LIVIATGSQGEPRSALAQLSR--GEMR 318 + + + + P + +++I+ + L + R Sbjct: 289 HRLTPEQCEAMCHAATIVNKPADSKALSARRGPMVIISASGMATGGRVVHHLKSFAPDHR 348 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 N L + A A I V V + + +S H ++ + Sbjct: 349 NTILFAGYQAGGTRGATILQGAASVRIHGEEVPIRAEVASLGS-----LSAHADAGEILQ 403 Query: 379 MYQWIR--PQVLVAIHGEP 395 + P++ HGEP Sbjct: 404 WMRGFDAAPKMTFVTHGEP 422 >gi|17544920|ref|NP_518322.1| hypothetical protein RSc0201 [Ralstonia solanacearum GMI1000] gi|17427210|emb|CAD13729.1| putative beta-lactamase-like;rna-metabolising metallo-beta-lactamase; protein [Ralstonia solanacearum GMI1000] Length = 452 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 58/437 (13%), Positives = 116/437 (26%), Gaps = 72/437 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + + G+ + +M+DCG+ F + + ++ A Sbjct: 6 LGATETVTGSKYVLETGA----RRVMVDCGL-FQGYKSL----RLRNWDTLAVNPHHIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYERVSKKIPCI 121 + +THAH DH G L L PVY + L + + Sbjct: 57 VVLTHAHIDHSGYLPLLVRNGFRGPVYCTKGTAELCNILLPDSARLAVEDAQYANAQGFS 116 Query: 122 SFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIRSPVG 158 + V E R H I + + + Sbjct: 117 RHHPALPLYDEQDAAKALRRLHPVGYGERFSVVDGVEAEFHRAGH-IIGAATVTLLAEGR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 V +GD D ++ + + L+ +ST R + I Sbjct: 176 RTVFSGDLGRQVDPVMRP---PEPVAE-----ADTLLVESTYGDRLHPPGDPLDELERIV 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRS---IIDIAEQIGRKIV--------LLGSSLKRVVSV 267 G +L+ F+ V R ++ + + R + + + Sbjct: 228 HRTIEQGGTLLIPAFA--VGRTQALLFCLYTLIRTHRIPHVPIYLDSPMAERATEVFARH 285 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---MRNVKLAE 324 ++ I D + + +Q + + + A + ++ G Sbjct: 286 VEELHIDAADCQAACALAVPVQSPQQSMHLGNDRAPKIILAASGMATGGRVLHHLKSFGG 345 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHPYPNDLKRMY 380 + + V V ++S H N+L Sbjct: 346 GKRNAILMSGFQAAGTRGAALLAGQRQLRVHGREIAIRATVEQIANLSAHADANELMAWL 405 Query: 381 QWIR--PQVLVAIHGEP 395 + P+ +HGEP Sbjct: 406 RGFSRAPEQTFIVHGEP 422 >gi|308160032|gb|EFO62542.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia P15] Length = 620 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 70/476 (14%), Positives = 145/476 (30%), Gaps = 71/476 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDL-VFPDITF 60 ++V +PLG IG + L GS S ++DCG+ + + +P L D+ + Sbjct: 9 DIVVIPLGMSPRIGNSCYLVIVGSKVS---FLLDCGLRTSAPDGERVPSFKLKCLQDMGY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHD---LWSFLHVPVYASPFAIGLLEAKRVYE----- 112 ++ +L I I+HAH DH GAL L+ + PVY + LL Sbjct: 66 SLER--DLDFIIISHAHFDHSGALPFLFSLFPNFNRPVYTTEATKFLLPQMYADYDRVFD 123 Query: 113 -------RVSKKIPCISFQAGDKVDVGAFS----------------------IESVRVNH 143 ++ K+ I ++ + + I H Sbjct: 124 NTNQSMSKLEKQARTIEVRSRIISLLKTYKSNTNFVADCQPSRTGEPVPETVINFSNAGH 183 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 I + + + IV+TGD+ L T G L+ ++T Sbjct: 184 IIGAVITTITVAGYAKIVYTGDYNTTARTTLPGATLPS-----CAIGADILITETTYCNI 238 Query: 204 EGTCISEKGIKKNIYDIMK--NAKGCVLVTTFS----SSVSRIRSIIDIAEQIGRKIVLL 257 + + + D+ + G VL+ T + + ++ + + L Sbjct: 239 SRRPSLYRDSLQ-LADVAETLRQNGRVLLPTSAMGLCQDIIVKVWSFWERFRLNKNKLFL 297 Query: 258 GSSLKRVVSVAID---VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + + + ++ A + + ++ +I TGS E + + Sbjct: 298 ATGMIKQMTDAQRILGNYSLDTTPFTSLPIYHRMREFDRRYIIPTGSANEE-AVNKVMGG 356 Query: 315 GEMRNVKLAEKDTVIFSSR--AIPGNEVAIGH--IKNRLVEQGVRVIAEDAECPVHVSGH 370 + + S+ G + +++ + H Sbjct: 357 PSADGLASTNDSWCVISAPNQTKTGVTLDCFMQIVQDPKALVAYPGHMPLMGYNWRIIRH 416 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 + L +V V I+ HL + + I + + + + Sbjct: 417 AAKHILFDNM-----KVAVPINCRATHLAFNAHVDFNGIIKTIDFLSPRAVFLIHN 467 >gi|219853328|ref|YP_002467760.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219547587|gb|ACL18037.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 258 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G G N L +++D G++ ++ + LV D I Sbjct: 1 MKVTALG-SGSKG-NCMLIE----GESGSLLVDAGLA-AREIQTRLALVGADPGSIE--- 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 AI +TH H DH L + +P+ A+ L E + K + I+ Sbjct: 51 ----AILVTHEHTDHIRGLDVMARRFDLPIIATGGT--LAEFFLHRKVSKKTVTTITCHP 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G +++G FSIE ++H + I + + D Sbjct: 105 GTTLEIGDFSIEPFSISHDAQDPCGYCIEEKSSRLGYCTD 144 >gi|242372581|ref|ZP_04818155.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] gi|242349798|gb|EES41399.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] Length = 260 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 15 VESEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +E K + +K + + F IES V+H + Sbjct: 67 ARKYNLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSIAGFDIESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFMFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 218 >gi|330825922|ref|YP_004389225.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans K601] gi|329311294|gb|AEB85709.1| beta-lactamase domain protein [Alicycliphilus denitrificans K601] Length = 452 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 61/439 (13%), Positives = 113/439 (25%), Gaps = 76/439 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L + + +++DCG+ F + + ++ A Sbjct: 6 LGATGTVTGSKYLLRHEGAT----LLVDCGL-FQGYKQL----RLRNWAPLPVPAADIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 I +THAH DH G L L VY S L + + Sbjct: 57 IVLTHAHIDHSGYLPLLARQGFKGKVYCSEATFDLCRILLPDSGHLQEEEAEYANRHSFS 116 Query: 122 SFQAGDKVDV-------------GAFSIESVRVN---------HSIPETMALVIRSPVGN 159 + + F N + + + I + Sbjct: 117 KHKPALPLYTREDAERCLKLFAPRPFGTTWSPANGLHARLDRSGHMLGSAFVRIDDGKRS 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-KGIKKNIY 218 I+ +GD D G + +ST R + I Sbjct: 177 ILFSGDIG--------RPNDLVLAAPTRLPGADYAVVESTYGDRAHEPGDPLAKLGDVIN 228 Query: 219 DIMKNAKGCVL----VTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVSVAIDV 271 V+ V + + I + + + L R+ D Sbjct: 229 RTAARGGTVVIPAFAVGRAQTLLYAIHLLKERGVIHHLPVYLDSPMAIDATRIYHAHRDE 288 Query: 272 GIIKKD--QLFLSDESFGLYPREQ---------LIVIATGSQGEPRSALAQLSR--GEMR 318 + D + + P + +++I+ + L + R Sbjct: 289 HRLTPDQCEAMCHAATIVNKPADSKALSARRGPMVIISASGMATGGRVVHHLKSFAPDHR 348 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 N L + A A I V V + + +S H ++ + Sbjct: 349 NTILFAGYQAGGTRGATILQGAASVRIHGEEVPIRAEVASLGS-----LSAHADAGEILQ 403 Query: 379 MYQWIR--PQVLVAIHGEP 395 + PQ+ HGEP Sbjct: 404 WMRGFDAAPQMTFVTHGEP 422 >gi|192289497|ref|YP_001990102.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|192283246|gb|ACE99626.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 454 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 84/267 (31%), Gaps = 34/267 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + Y S+ +++DCG+ L + + E Sbjct: 3 LKLSFLGGAGTVTGS----KYLLQSASHRLLVDCGLFQGARALREM-----NWERFPVEP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ +THAH DH GAL L + + S L E ++ Sbjct: 54 AGISAVILTHAHLDHSGALPLLVRQGFNGTILCSEATAALCEVLLRDSGHLQEQDARFAN 113 Query: 125 AGDKVDVGA----------------FSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWK 167 S HS+P L++R + + + + Sbjct: 114 KRGFSKHKPALPLYTVKDAEAALRLLRPVSFHGGHSLPGGGNLMLRRAGHILGAASIEIE 173 Query: 168 LDD-----DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 + LG D L L+ +ST R I + + + Sbjct: 174 WEQISVAFSGDLGRHDDPIMLQPEPLTKADYLVVESTYGDRSHPKIDPQRTIEEVVGTTA 233 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G V++ F+ V R+++++ + Sbjct: 234 RRGGTVVIPAFA--VGRVQALLYYFAR 258 >gi|206970668|ref|ZP_03231620.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|206734304|gb|EDZ51474.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] Length = 419 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 52/445 (11%), Positives = 130/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ ++ P ++ L A Sbjct: 7 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYENSYPKIEGEVVQF---------LDA 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 54 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWKLPYSDQH 113 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ + Sbjct: 114 IKDLNYVCIDEISNPNEWIQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 173 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + +I + + + Sbjct: 174 NIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNDRLDDLCAEIERVMQNEGIA 225 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 226 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKGWIKNNEELKWIMESLK 285 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 286 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 339 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V + V H D+K M + P+ V +H Sbjct: 340 GSF--------AEKVMKEHVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 391 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 392 DTDRLQQKLSTAGYENVYSLAMERI 416 >gi|260584459|ref|ZP_05852206.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] gi|260157977|gb|EEW93046.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] Length = 430 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 80/435 (18%), Positives = 148/435 (34%), Gaps = 58/435 (13%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDL------- 53 ++ V G+ IG + YG+ I D G F P+ DLP L Sbjct: 3 SKDKTVVTFHSGILTIGGTVIEVSYGNSH----IFFDFGTEFRPELDLPDEQLQTLIQYG 58 Query: 54 VFPDITFIMKERKNLM------------AIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 + P + + R A+F++HAH DH ++ L +P+Y Sbjct: 59 IIPKLNHVYDPRLGYEYDGEETEEYENTAVFLSHAHLDHSRMINYL--DPAIPLYTLKET 116 Query: 102 IGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +L + E+ I + V VG +IE V V+H AL+ Sbjct: 117 KMILNSLNRNGDFLLPTPFEKSPFTREMIGLEPNAIVTVGDITIEVVPVDHDAYGASALL 176 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA----IGNEGILALMCDSTNAMREGTCI 208 IR+P I +TGD +L I + + EG+ + E Sbjct: 177 IRTPDHFITYTGDLRL-HGYIPEATVEFCKKAKHTQMLMMEGVTISFPERPVDPTEIKPT 235 Query: 209 SEKGIKKNIYDIMKNAKG-CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 +E + + + + + + ++V R I++ + + + +L + V Sbjct: 236 NELEVIEKVVQFQQENPNRPIAFNGYPANVERFAKIVEESPRTVVLEAHMA-ALLQEVFG 294 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 + + + + L Q ++ + Q+ KL E Sbjct: 295 VHAHFYYSNEAKRIPELNHDLEVSYQTLI------DDQGEYFWQVVDNFD---KLQEGTL 345 Query: 328 VI-FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + ++ + + + L + + + + SGH P DL R+ I PQ Sbjct: 346 YLHCDAQPLGDFDPNYQVFLDLLAKHHIEFV------KIACSGHAKPADLDRIIAMIEPQ 399 Query: 387 VLVAIHGEPLHLVAH 401 +LV IH L+ + Sbjct: 400 LLVPIHTLKPELLEN 414 >gi|311108616|ref|YP_003981469.1| metallo-beta-lactamase [Achromobacter xylosoxidans A8] gi|310763305|gb|ADP18754.1| metallo-beta-lactamase superfamily protein 9 [Achromobacter xylosoxidans A8] Length = 452 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 61/443 (13%), Positives = 126/443 (28%), Gaps = 72/443 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L + ++IDCG+ F +L + + Sbjct: 2 LTLTCLGGAGTVTGSKHLLSHA----DTRLLIDCGL-FQGLK----NLRELNWQSLPLSP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVY------- 111 ++ A+ +THAH DH G L L + ++A+P + E A Sbjct: 53 ADIDAVVLTHAHLDHCGYLPRLVAEGFKGKIHATPATRDVAELILLDSANLQEKDADFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALVI 153 + + + ++ G ++ R H I I Sbjct: 113 RKGFSKHKPALPLYRVADAERALTRFADVALHQETALPGGATLTLRRAGH-ILGATTAQI 171 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD DD ++ D + ++ +ST R Sbjct: 172 DIGGMRVVFSGDLGRYDDPVMH---DPE-----PVPRADYIVIESTYGNRRHDPADPVEA 223 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS 266 + + G V++ F+ V R +++I + + L Sbjct: 224 LGAVIERTVQRGGTVVIPAFA--VGRAQTLIHALWTLRQAGRLRNVPVYLDSPMATSATE 281 Query: 267 VAIDVGIIKKDQLFLSDESFGLY----PREQLIVIATGSQGEPRSALAQLSRGE---MRN 319 + K + + E+ ++ + + + ++ G Sbjct: 282 LLDRHAGEHKLSPREYEAACAAVTYVRDVEESKALSANRYPKVIISASGMATGGRVLHHI 341 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPND 375 + + E + + V +S H ++ Sbjct: 342 AAFGNDHRNTLLFSGFQAAGTRGRKLLDGATETKIYGQWTPIKAEVAELPMLSAHADSDE 401 Query: 376 LKRMYQWIR--PQVLVAIHGEPL 396 L R + P+ + +HGEP Sbjct: 402 LMRWLSGFQEAPRRVFIVHGEPE 424 >gi|222100897|ref|YP_002535465.1| Hydrolase of the metallo-beta-lactamase superfamily-like protein [Thermotoga neapolitana DSM 4359] gi|221573287|gb|ACM24099.1| Hydrolase of the metallo-beta-lactamase superfamily-like protein [Thermotoga neapolitana DSM 4359] Length = 502 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 61/481 (12%), Positives = 141/481 (29%), Gaps = 117/481 (24%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL--------------MA--- 70 S ++D G++F + + + P I+ + L Sbjct: 2 VDSENDAFLLDFGLNFSRWGEFFEEFLNPRTGRILHDLLKLNMVPRLNIYREDLFDGKFE 61 Query: 71 -------IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---------------- 107 +F++HAH DH G + + +P+ + + ++ A Sbjct: 62 DPVNYSFLFLSHAHADHTGMVGLI--DEKIPLLMTGETLAVMNASVKTTNSNVLIQLDGK 119 Query: 108 -------KRVYERVSK----------------------KIPCISFQAGDKVDVGAFSIES 138 K V + K ++ + + + Sbjct: 120 KRRKASEKDVENGIRPDLTVSGRSKDTEELERCISFPEKTELDDYRTVEMSTLWKDDLFV 179 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL--GDVTD-------------KDSL 183 V HS+ LV++ + +TGD++ + D Sbjct: 180 EPVYHSVIGAAGLVVKVDGFWLAYTGDFRTGPETPEEERYWLDTLGEKRLSLSLRTFQFF 239 Query: 184 CAIGNEGILALMCDSTN-AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + ++ + L+ + T A E +EK + +N + + K +LV + R+ + Sbjct: 240 EKLKDKRPIVLIVEGTRLAREENVENTEKDVYENATKVFRKTKNLILVDFPVRHLERLFT 299 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII---KKDQLFLSDESFGLY---------- 289 + + + RK+VL+ ++ + + ++++ + G Sbjct: 300 FLKVCMENNRKLVLMPKDYAYLIEMERVEPLWKLSEEEKSHIRVYHPGKLTYINLEKEAL 359 Query: 290 ---PREQLIVIATGSQGEPRSALAQLSRGEMRNV-----KLAEKDTVIFSSRAIPGNEVA 341 E +++ P + ++ + I S+ E Sbjct: 360 IKAKSEGILIPPNEINYSPGEYTLVAGYWDFPHILDLDENVLNGAIYIHSTSEAYTEEQE 419 Query: 342 I--GHIKNRLVEQGVRVI-------AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIH 392 I N L ++ + H SGH P L+ + ++P +V +H Sbjct: 420 IDARRFMNWLRYFNIKPFGLKERNGSVVFTKEFHASGHVSPRSLEAILNDLKPDYIVPVH 479 Query: 393 G 393 Sbjct: 480 T 480 >gi|145423876|gb|ABP68574.1| YycJ [Staphylococcus sciuri] Length = 260 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + I + +L I +TH H DH L L Sbjct: 15 IESDKGSLLVDAGLTGKKIEGL--------FQQIDRNISDLEGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ ++EAK + +K F+ + + IES V+H + Sbjct: 67 ARKYKLPIYANKKTWQMIEAKDKNIPLDQKFH---FEPYETKTLAGMDIESFSVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + + D + D + +D + + +L + Sbjct: 124 PQFYIFNNDYKKLTMITDTGYVSDRMKGMIHGSDAFVFESNHDVDMLRMGKYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + ++ S Sbjct: 184 LSDMGHVSNEDAAHAMCDVITGSTKRIYLSHLSQD 218 >gi|323704864|ref|ZP_08116441.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535790|gb|EGB25564.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] Length = 537 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 74/537 (13%), Positives = 147/537 (27%), Gaps = 115/537 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + + +IDCG F + + + + Sbjct: 1 MKITFLGAAKEVTGSCYLVE----TEKSKFLIDCG-MFQGSE------IEDEYNYQEFAF 49 Query: 66 K--NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ + +THAH DH G + L+ +YA+ + L E ++I Sbjct: 50 DIADIDFMLLTHAHIDHSGRIPLLFKRGYRKKIYATKGTVDLCEYMLQDSGHIQQIE-NE 108 Query: 123 FQAGDKVDVG---------------------------------AFSIESVRVNHSIPETM 149 ++ + G ++ H + + Sbjct: 109 WKNRKRKRAGKTLRMPLYTADDGKAAMQLFCGVNYDEIIEPSEDVKVKFNDAGH-MLGSS 167 Query: 150 ALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 L I +V +GD + IL D T + L+C+ST R Sbjct: 168 ILEIWVKEGGKETKVVFSGDLGNKNIPILRDPT--------IIDEADYLVCESTYGDRLH 219 Query: 206 TCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ------------I 250 + +K K + +I+K G V++ +F+ V R + ++ + Sbjct: 220 EDVGDK--AKKLMEIIKKTISRGGNVIIPSFA--VGRTQELLYEIHKDEELYKNEIEYIS 275 Query: 251 GRKIVL---------------------LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 + + S +D + ++ Sbjct: 276 KVPVYVDSPLATSVTDVFRKHLDYFDDEARSYVENGDYPLDFPNLHFTHSTEESKALNDL 335 Query: 290 PREQLIVIATGS--QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 +I+ A+G G + L + R I E + Sbjct: 336 KEPVIIISASGMCEAGRIKHHLKHNLWRSDSTIVFVGYQAKGTLGRRILEGEKTV----- 390 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELA 405 + + + V AE SGH + +P+ + +HGE E Sbjct: 391 NIFGEEITVNAEIQNIESF-SGHADQKGIMDWISSFKKKPKKVFIVHGEDSAQKVLSEKI 449 Query: 406 LQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLS 462 D + V D ++ + +L + LS Sbjct: 450 KDVFNIETVIPSKYDTYDFESDEV----NVTEIPLPSDDEILRQIEELRTENDKILS 502 >gi|154688135|ref|YP_001423296.1| YycJ [Bacillus amyloliquefaciens FZB42] gi|154353986|gb|ABS76065.1| YycJ [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + G+ + I ++ ++ IF+TH H DH L Sbjct: 17 FYLETEEHSFLVDAGLS--GKAMDGL------MEKIGRKIDDVDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +PVYA+ +E + F G +ES V+H Sbjct: 69 VIARKYGLPVYANEKTWKAMENQI---GKLDTGQKFLFPMESVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQD 222 >gi|254168474|ref|ZP_04875318.1| hypothetical protein ABOONEI_2642 [Aciduliprofundum boonei T469] gi|197622529|gb|EDY35100.1| hypothetical protein ABOONEI_2642 [Aciduliprofundum boonei T469] Length = 520 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 76/486 (15%), Positives = 157/486 (32%), Gaps = 131/486 (26%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-----------------------DDLP 49 G IG + I +D G++F + LP Sbjct: 8 GAESIGGS----KIYLRDGNHGIFLDFGLNFSIMGKYFKEFISMRAIRGLNDPIEMNLLP 63 Query: 50 GVDL----VFP-DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP---------- 94 +D+ + P D+ ER + A+ +THAH DHYG + L +P Sbjct: 64 PIDVYREDLIPSDLNTSNWERIPVDAVLLTHAHMDHYGMIGYL--RFDIPLVASPETLAI 121 Query: 95 ----------------VYASP-----FAIGLLEAK-----RVYERVSKKIPCISFQAGD- 127 +Y + ++ +L++K E++ K + + Sbjct: 122 IKAYQDAGKSDNATSVIYGAKREEDSSSMPILKSKGNSIKNNEEKIRKYLMLRRLIPTEE 181 Query: 128 -----------------------KVDVG-----AFSIESVRVNHSIPETMALVIRSPV-G 158 ++ G F + + V+HSI + +I Sbjct: 182 LSYEEIDFLCLQSTEERMDYLAEMLEFGHLESLPFKVNAHPVDHSIYGAVGYIIEDGNSK 241 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGN-EGILALMCDSTNAM--REGTCISEKGIKK 215 I +TGD+++ + +++L I +G L+ + T RE +E+ + + Sbjct: 242 KIAYTGDFRMHGERG------EETLKFINKAKGSDVLIIEGTRLEDDREHHYTTEQDVFE 295 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 N ++ + KG ++ + + R+ IA++ GR +++ + + I Sbjct: 296 NCSAVVGDEKGLIIADFSARNFERLNMFAKIAKENGRNLIVTDKDAYAITGLLTAGTEID 355 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------SALAQLSRGEMRNVK 321 + + + D+ Q ++ + A + M ++K Sbjct: 356 VENIMVYDKPQDRVGWWQKMLAYHDLWEDKYVAPVEIREYPGNYILAFSLYDMPNMMDIK 415 Query: 322 LAEKDTVIFSSRA-IPGNEVAIGHIKNRLVEQGVRVIAEDAECP-------VHVSGHPYP 373 + S+ A E+ + N L G+R + E H SGH Sbjct: 416 TQGGMYLYSSTEAFTEDMELDFVTLSNWLSRYGMRSVGFHMEGNKPKFDEGYHASGHASE 475 Query: 374 NDLKRM 379 +++ M Sbjct: 476 EEIRSM 481 >gi|229078971|ref|ZP_04211523.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock4-2] gi|228704385|gb|EEL56819.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock4-2] Length = 417 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 52/445 (11%), Positives = 132/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ ++ P ++ + L A Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYENGYPKIE---------REAVPFLDA 51 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 52 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNLPYSDQH 111 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ + Sbjct: 112 IKDLNYVCIDEISNPNEWLQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 171 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + +I + + + Sbjct: 172 NIL------RANLPEKLGHNIKVAIVDAAY--HTDEVSQNERLDDLCAEIERVMQNEGIA 223 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 224 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKGWIKNNEELKWIMESLK 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 284 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 337 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V + V H D+K M + P+ V +H Sbjct: 338 GSF--------AEKVMKEHVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 389 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 390 DTDRLQQKLSTAGYENVYSLAMERI 414 >gi|52082609|ref|YP_081400.1| hypothetical protein BL02375 [Bacillus licheniformis ATCC 14580] gi|52788007|ref|YP_093836.1| YycJ [Bacillus licheniformis ATCC 14580] gi|52005820|gb|AAU25762.1| conserved hypothetical protein YycJ [Bacillus licheniformis ATCC 14580] gi|52350509|gb|AAU43143.1| YycJ [Bacillus licheniformis ATCC 14580] Length = 264 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 17/214 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + ++D G+S + G+ + I ++ L IF+TH H DH L L Sbjct: 20 ETDDHAFLVDAGLS--GKAMEGL------MAQIDRKLDQLDGIFVTHEHSDHIKGLGVLA 71 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 +PVYA+ +A + F G+ +ES V+H E Sbjct: 72 RKYELPVYANEKTW---KAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEP 128 Query: 149 MALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNAM 202 M V + D + D + + + + G+L + + Sbjct: 129 MFYVFHYNGRKLALITDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYPWNIKRRIL 188 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + +S + + D++ N + + S Sbjct: 189 SDVGHVSNEDAALAMTDVIGNETSRIYLAHLSQD 222 >gi|257458153|ref|ZP_05623307.1| metallo-beta-lactamase protein [Treponema vincentii ATCC 35580] gi|257444447|gb|EEV19536.1| metallo-beta-lactamase protein [Treponema vincentii ATCC 35580] Length = 692 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 8/126 (6%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSR--KWIMIDCGVSFPKDDLPGVDLVFPDIT 59 K +L +G + + + L Y + + ++DCG + + + +D + Sbjct: 6 KENKLRIAFMGAINCVSGSCTLLEYSNSEKDICNYYLVDCG-EYQEINHNYID----NKK 60 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ K + A+F+THAH DH G L DL +Y + + L + KK Sbjct: 61 RVLSLAKKIRAVFLTHAHADHIGLLPDLIDNGFSGRIYCTRATMDLTKIMLEDALHIKKQ 120 Query: 119 PCISFQ 124 + Sbjct: 121 ENKDIK 126 >gi|89894388|ref|YP_517875.1| hypothetical protein DSY1642 [Desulfitobacterium hafniense Y51] gi|89333836|dbj|BAE83431.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 579 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 76/611 (12%), Positives = 171/611 (27%), Gaps = 112/611 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G + + L G ++IDCG+ F +L + D + Sbjct: 10 MKLYFY--GAAQVVTGSSYLVESGGYR----VLIDCGL-FQGSKALK-ELNYGDFPY--- 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 L A+ +THAH DH G + L + +YA+P I L +++ Sbjct: 59 NPAELNAVILTHAHTDHSGLIPKLIKYGFQGKIYATPETIKLCSVMLPDSGHIQEMEVER 118 Query: 119 ---------------------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMA 150 Q + S H I + Sbjct: 119 KNRKLKRASQDLLTPIYTAQDAQDSLKFFTPAQYDQSTQLSPEISFTFHDAGH-ILGSAF 177 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + + G + T + D + + G ++ ++T R+ + Sbjct: 178 VQMTVKEGELEKTLVFSGDVGNSEQPFIENPRI----ICGGDIVIVETTYGDRQHENRAN 233 Query: 211 KGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 + I A G +++ F+ + R + ++ ++ + + V Sbjct: 234 RIQHLAEIIREAHQAGGNLVIPAFA--IERTQDLLFYIRKLQTE-------NEIPVMPIY 284 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTV 328 + + E+ + +E L +I G + L+ + + + + Sbjct: 285 VDSPLAIAATKIFQENPQNFDQETLDMIQRGEHPLLMPNVHYSLTSEDSMAINSIQGGAI 344 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC------------------------- 363 I ++ + H+K L + V+ + Sbjct: 345 IIAASGMADAGRIKYHLKYNLWRENATVLFVGYQAQGTLGRRIIEGAKEVTIHGEKVAVR 404 Query: 364 -----PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +S H L + + ++ +HGEP + ++ Sbjct: 405 ANIRRMEGLSAHADQPQLLEWLSCLGEDAENIILVHGEPDVQKTFAQKIQEKFGKIPWIP 464 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNH 476 + G++L I+ + + + +I A R+ ++ G + Sbjct: 465 QLGEVLE-----IKNREVIPYPPSKPWLQVIEAEAQQASETRQAMAHGGAEVAQL----- 514 Query: 477 YNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRE--SISSAL 534 P + G ++ + + L R+ L ++ + Sbjct: 515 ------PTL-SRGKSGQAKITQAQINRAMQRLRHRLKVLVDNGRRS-NNLEHTLAVIDTI 566 Query: 535 RSLLKKVWGKK 545 L + KK Sbjct: 567 TRWLDDMDNKK 577 >gi|251811386|ref|ZP_04825859.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|293367559|ref|ZP_06614212.1| metallo-beta-lactamase YycJ [Staphylococcus epidermidis M23864:W2(grey)] gi|251805135|gb|EES57792.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|291318272|gb|EFE58665.1| metallo-beta-lactamase YycJ [Staphylococcus epidermidis M23864:W2(grey)] Length = 260 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 15 VESEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F IES V+H + Sbjct: 67 ARKYKLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSLAGFDIESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 218 >gi|153806370|ref|ZP_01959038.1| hypothetical protein BACCAC_00631 [Bacteroides caccae ATCC 43185] gi|149131047|gb|EDM22253.1| hypothetical protein BACCAC_00631 [Bacteroides caccae ATCC 43185] Length = 267 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKTLKDFNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ L L++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGHLGEKLNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + + F IES V H + + I D Sbjct: 105 LEKK--EPITLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|323697719|ref|ZP_08109631.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio sp. ND132] gi|323457651|gb|EGB13516.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio desulfuricans ND132] Length = 535 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 66/478 (13%), Positives = 132/478 (27%), Gaps = 65/478 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G + + + G K +DCG+ ++ + Sbjct: 1 MKVTFMGAARTVTGSCYILECG----GKRFAVDCGMHQGNREIEKRNWNIAAYG-----P 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K L I ITHAH DH G L L + H P+Y + LLE + +++ Sbjct: 52 KKLDFILITHAHMDHTGLLPALVAKGYHNPIYCTAPTRDLLEIMLLDSAHIQEMETEWDN 111 Query: 125 AGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNIVHTG------- 164 + G + +++S A I+ + H Sbjct: 112 RKQRRTGGDMIKPLYTIADAERTTPLFATIDYSKTFEPAPGIKVTYKDAGHILGSAFIEI 171 Query: 165 DWKLDDDAILGDVT-DKDSLCAI------GNEGILALMCDSTNAMREGTCISEK--GIKK 215 +++ D + D + E L +ST R + + Sbjct: 172 EYEEDGKLTKTVFSGDLGRPEQLIVNDPSDMECADYLFMESTYGNRNHVDAKGSLEELAE 231 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 I N + V+ +I + + + G+ + L +++ I + Sbjct: 232 AIAYSYGNGEKVVIPAFAVERSQQIIYSLFLLRKQGKLPADMPVYLDSPLAI-RATEIFR 290 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGE-------------------PRSALAQLSRGE 316 K + +E+ + + S +A R + Sbjct: 291 KHPEYFDEETQKYIRAGENPLDLPNLHFTQTREQSQAINESKGPAIIISASGMANAGRIK 350 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPY 372 + G I N + + + V SGH Sbjct: 351 HHLRHNLWRPGASVVFVGWQGVGTPGRKIVNGAKKITIFGEEVLVKAKVFTINGFSGHAG 410 Query: 373 PNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDP 428 ++L + +P ++ +HGE L ++ V ++L L P Sbjct: 411 RDELLDWLGTMQGKPIKILLVHGEAEVQKEFARLIVERFGFEVHIPEYMEVLELEPGK 468 >gi|319648474|ref|ZP_08002690.1| hypothetical protein HMPREF1012_03729 [Bacillus sp. BT1B_CT2] gi|317389553|gb|EFV70364.1| hypothetical protein HMPREF1012_03729 [Bacillus sp. BT1B_CT2] Length = 264 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 71/214 (33%), Gaps = 17/214 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + ++D G+S + G+ + I ++ L IF+TH H DH L L Sbjct: 20 ETDDHAFLVDAGLS--GKAMEGL------MAQIDRKLDQLDGIFVTHEHSDHIKGLGVLA 71 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 +PVYA+ +A + F G+ +ES V+H E Sbjct: 72 RKYELPVYANEKTW---KAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEP 128 Query: 149 MALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNAM 202 M V + D + D + + + + G+L + + Sbjct: 129 MFYVFHYNGRKLALITDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYPWNIKRRIL 188 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + +S + + D++ + + + S Sbjct: 189 SDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQD 222 >gi|262404993|ref|ZP_06081545.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC586] gi|262348832|gb|EEY97973.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC586] Length = 438 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 135/444 (30%), Gaps = 92/444 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + + ++IDCG+ D+ P + ++ A+ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGLFQGADERPLA---------VEFALGHVDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC----- 120 +THAH DH G L L + P+Y + L+ +S K Sbjct: 54 ILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERVLTE 113 Query: 121 -----ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLD 169 V + H I + + IR P G + V +GD Sbjct: 114 VRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVAVFSGDLGPS 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK--GIKKNIYDIMKNAKGC 227 +L D + L ++T ++ + + ++ I + + G Sbjct: 173 HTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSRGQRLRAMIERSLADG-GA 223 Query: 228 VLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLG-------SSLKRVVSV----- 267 +L+ FS V R + ++ EQ I+L S +R + Sbjct: 224 ILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWGREA 281 Query: 268 ---AIDVGIIKKDQLFLSDESFGLYPR--------EQLIVIATGS----QGEPRSALAQL 312 + ++ E + R + ++ S G L L Sbjct: 282 KARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYLKAL 341 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + ++ LA R I E ++ I +E + S H Sbjct: 342 LPDKRTDLILAGFQAEGTLGRKIQSGEKSVW-IDGDEIEVNAHIHTMSG-----YSAHAD 395 Query: 373 PNDLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 396 KADLLRFITGIPEKPKQVHLIHGE 419 >gi|308066963|ref|YP_003868568.1| metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Paenibacillus polymyxa E681] gi|305856242|gb|ADM68030.1| Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Paenibacillus polymyxa E681] Length = 461 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 90/272 (33%), Gaps = 42/272 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L GG GE G + ++ ++ +M+DCGV V F ++ Sbjct: 5 KLRI--WGGAGEHGRSCYVFE----GTQHHVMLDCGVKKEGTGQYPV--------FPPQK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER---------- 113 + L + ++HAHEDH AL L+ + V+ + L + Sbjct: 51 AEKLTTVLLSHAHEDHSMALPLLYKYGYQGEVWTTKATAEQLGSYFRSWHTYVESRGAEL 110 Query: 114 ---------VSKKIPCISFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 ++ + AG+ ++ I R H + + + + + Sbjct: 111 PYDVQDIQSIAYRYLEDEAPAGEWLEACPGVRIMWGRSGH-LAGAVWYAVEMEGKRLFFS 169 Query: 164 GDWKLDDDAILGDVTD------KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 GD+ + + + D D L +E LA + NA +++ Sbjct: 170 GDYSRESELLAADAPDLGVGEELHDLPEWKSEPNLADISIMDNAYGMDIDPQPVKLERLR 229 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ + V + R + +I A + Sbjct: 230 VEMERILWSGGHVLLPVPAFGRGQDMIVWASE 261 >gi|167039678|ref|YP_001662663.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|256750608|ref|ZP_05491494.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300915073|ref|ZP_07132388.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307724996|ref|YP_003904747.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] gi|166853918|gb|ABY92327.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|256750448|gb|EEU63466.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300888797|gb|EFK83944.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307582057|gb|ADN55456.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] Length = 616 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 81/229 (35%), Gaps = 37/229 (16%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP--GVDLVFPDITFIMKE 64 F GG IG + L Y + I++D G L + + DI Sbjct: 204 KFFCWGG-DNIGASSYLVSYEGIN----ILLDAGALIKDKTLYYNSIKNLPIDI------ 252 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA-----------KRVYE 112 K++ + ITH H DH G + +L L+ P+ S +L+ K E Sbjct: 253 -KDIDLVIITHVHLDHSGGIVELLRKGLNSPIIISRPTKEILKQIFLRGHTKLEVKIEEE 311 Query: 113 RVSKKIPCISFQAGD----KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ ISF + ++ ++ H I +A+ + I +TGD+ L Sbjct: 312 IINFDSQIISFDTEEESSFRIKNKEVKLKLFPAGH-ILGAVAVYLEIDGIKIFYTGDFTL 370 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 D L + + + L+ ++T + K ++ + Sbjct: 371 KDVESN------KGLRFLPDLKVDILITEATYGYGNNFGVQNKYLQDKL 413 >gi|116871685|ref|YP_848466.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740563|emb|CAK19683.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 276 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I++DCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLIETG----DQKILVDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRNMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + + V D + D Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHNGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|159112921|ref|XP_001706688.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] gi|157434787|gb|EDO79014.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] Length = 620 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 69/476 (14%), Positives = 145/476 (30%), Gaps = 71/476 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDL-VFPDITF 60 ++V +PLG IG + L GS S ++DCG+ + + +P L D+ + Sbjct: 9 DIVVIPLGMSPRIGNSCYLVIVGSKVS---FLLDCGLRTSAPDGERVPSFKLKCLQDMGY 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHD---LWSFLHVPVYASPFAIGLLEAKRVYE----- 112 ++ +L I I+HAH DH GAL L+ + PVY + LL Sbjct: 66 SLER--DLDFIIISHAHFDHSGALPFLFSLFPNFNRPVYTTEATKFLLPQMYADYDRVFD 123 Query: 113 -------RVSKKIPCISFQAGDKVDVGAFS----------------------IESVRVNH 143 ++ K+ I ++ + + I H Sbjct: 124 NTNQSMSKLEKQARTIEVRSRIISLLKTYKNNTNFVADCQPSRTGEPVPETIINFSNAGH 183 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 I + + + IV+TGD+ L T + G L+ ++T Sbjct: 184 IIGAVITTITVAGCAKIVYTGDYNTTARTTLPGATLPN-----CAIGADILITETTYCNI 238 Query: 204 EGTCISEKGIKKNIYDIMK--NAKGCVLVTTFS----SSVSRIRSIIDIAEQIGRKIVLL 257 + + + D+ + G VL+ T + + ++ + + L Sbjct: 239 SRRPSLYRDSLQ-LADVAETLRQNGRVLLPTSAMGLCQDIIVKVWSFWERFRLNKNKLFL 297 Query: 258 GSSLKRVVSVAID---VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 + + + ++ A + + ++ +I GS E + + Sbjct: 298 ATGMIKQMTDAQRILGNYSLDTTPFTSLPIYHRMREFDRRYIIPAGSASEE-AVSKVMGG 356 Query: 315 GEMRNVKLAEKDTVIFSSR--AIPGNEVAIGH--IKNRLVEQGVRVIAEDAECPVHVSGH 370 + + S+ G + +++ + H Sbjct: 357 PSADGLASTSDSWCVISAPNQTKTGVTLDCFMQIVQDPKALVAYPGHMPLMGYNWRIIRH 416 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 + L +V V I+ HL + + I + + + + Sbjct: 417 AAKHILFDNM-----KVAVPINCRATHLAFNAHVDFNGIIKTIDFLNPRAVFLIHN 467 >gi|327261273|ref|XP_003215455.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 3-like [Anolis carolinensis] Length = 651 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 51/427 (11%), Positives = 119/427 (27%), Gaps = 61/427 (14%) Query: 37 IDCGVSFPKDDL---PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--L 91 +DCG+ + + P +DL+ P + + I+H H DH GAL Sbjct: 5 LDCGIHPGLEGMDALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTSF 55 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGAF 134 + + + I + + +V Sbjct: 56 KGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGI 115 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 H + +I +++TGD+ +D L I N L Sbjct: 116 KFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDIL 167 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---- 250 + +ST E+ + + ++ R + ++ I ++ Sbjct: 168 IIESTYGTHIHEKREEREAR-FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNH 226 Query: 251 ---GRKIVLLGSSLKRVVSVAIDVGII-KKDQLFLSDESFGLYPREQLIVIATGSQGE-- 304 + SSL + + D++ + + + + + + Sbjct: 227 PELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDI 286 Query: 305 --------PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGV 354 P + LSR + +++ VI + + G + + + G Sbjct: 287 GPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQ 346 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE-PLHLVAHKELALQEGIACV 413 ++ + + + S H + ++P ++ +HGE L + Sbjct: 347 KLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDE 406 Query: 414 PPVRNGK 420 + Sbjct: 407 VHIEVHN 413 >gi|289596709|ref|YP_003483405.1| hypothetical protein Aboo_1034 [Aciduliprofundum boonei T469] gi|289534496|gb|ADD08843.1| conserved hypothetical protein [Aciduliprofundum boonei T469] Length = 519 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 68/420 (16%), Positives = 138/420 (32%), Gaps = 101/420 (24%) Query: 52 DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP----------------- 94 DL+ D+ ER + A+ +THAH DHYG + L +P Sbjct: 71 DLIPSDLNTSNWERIPVDAVLLTHAHMDHYGMIGYL--RFDIPLVASPETLAIIKAYQDA 128 Query: 95 ---------VYASP-----FAIGLLEAK-----RVYERVSKKIPCISFQAGD-------- 127 +Y + ++ +L++K E++ K + + Sbjct: 129 GKSDNATSVIYGAKREEDSSSMPILKSKGNSIKNNEEKIRKYLMLRRLIPTEELSYEEID 188 Query: 128 ----------------KVDVG-----AFSIESVRVNHSIPETMALVIRSPV-GNIVHTGD 165 ++ G F + + V+HSI + +I I +TGD Sbjct: 189 FLCLQSTEERMDYIAEMLEFGHLESLPFKVNAHPVDHSIYGAVGYIIEDGNSKKIAYTGD 248 Query: 166 WKLDDDA--ILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIM 221 +++ + T+K G L+ + T RE +E+ + +N ++ Sbjct: 249 FRMHGERGEETLKFTNKAK-------GSDVLIIEGTRLEDDREHHYTTEQDVFENCSAVV 301 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 + KG ++ + + R+ IA++ GR +V+ + + I + + + Sbjct: 302 GDEKGLIIADFSARNFERLNMFAKIAKENGRNLVVTDKDAYAITGLLTAGTEIDVENIMV 361 Query: 282 SDESFGLYPREQLIVIATGSQGEPR--------------SALAQLSRGEMRNVKLAEKDT 327 D+ Q ++ + A + M ++K Sbjct: 362 YDKPQDRVGWWQKMLAYHDLWEDKYVAPVEIREYPGNYILAFSLYDMPNMMDIKTQGGMY 421 Query: 328 VIFSSRA-IPGNEVAIGHIKNRLVEQGVRVIAEDAECP-------VHVSGHPYPNDLKRM 379 + S+ A E+ + N L G+R + E H SGH +++ M Sbjct: 422 LYSSTEAFTEDMELDFVTLSNWLSRYGMRSVGFHMEGNKPKFDEGYHASGHASEEEIRSM 481 >gi|223043367|ref|ZP_03613413.1| YycJ [Staphylococcus capitis SK14] gi|222443156|gb|EEE49255.1| YycJ [Staphylococcus capitis SK14] Length = 263 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 18 VESEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +E K + +K + + F IES V+H + Sbjct: 70 ARKYNLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSIAGFDIESFNVSHDAID 126 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 127 PQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFMFESNHDVDMLRMCRYPWKTKQRI 186 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 187 LSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 221 >gi|27466940|ref|NP_763577.1| hypothetical protein SE0022 [Staphylococcus epidermidis ATCC 12228] gi|57865892|ref|YP_190071.1| metallo-beta-lactamase family protein YycJ [Staphylococcus epidermidis RP62A] gi|242243234|ref|ZP_04797679.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|282874743|ref|ZP_06283622.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|27314482|gb|AAO03619.1|AE016744_22 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57636550|gb|AAW53338.1| metallo-beta-lactamase family protein YycJ [Staphylococcus epidermidis RP62A] gi|242233183|gb|EES35495.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|281296459|gb|EFA88974.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|319399896|gb|EFV88142.1| metallo-beta-lactamase superfamily protein [Staphylococcus epidermidis FRI909] gi|329736110|gb|EGG72383.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU045] Length = 266 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 21 VESEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F IES V+H + Sbjct: 73 ARKYKLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSLAGFDIESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|218780631|ref|YP_002431949.1| RNA-metabolising metallo-beta-lactamase [Desulfatibacillum alkenivorans AK-01] gi|218762015|gb|ACL04481.1| RNA-metabolising metallo-beta-lactamase [Desulfatibacillum alkenivorans AK-01] Length = 538 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 79/529 (14%), Positives = 143/529 (27%), Gaps = 92/529 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L S + I++DCG+ + + Sbjct: 2 VRVTCLGAAGGVTGSNHLVE---TSDGRKILVDCGLFQGGKQMEAR-----NWESWGFNP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 ++ + +THAH DH G + L + ASP I L Sbjct: 54 ADIDLVIVTHAHIDHIGRIPKLIKDGYKGKIIASPPTIDLAEILLLDSAHIQEMNAEWQT 113 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALV 152 + KR + + + I H I + L Sbjct: 114 RKNKRRGSKDIQPLYTTPDAERSLSHFQPQNRDEMLELNMGVRIRLRNAGH-ILGSAILE 172 Query: 153 IRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + IV +GD + I+ D + A L +ST R Sbjct: 173 MWIEDDGQEMKIVFSGDIGQPEQLIIKDP--YEVFAA------DFLFMESTYGNRLHKSH 224 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK------ 262 E ++ + I + + V + +V R + I+ I + R VL + Sbjct: 225 EESR-QELLEAIKYSYENGEKVVIPAFAVERTQEILYILGEFHRAGVLPDMPIYLDSPLA 283 Query: 263 -RVVSVAIDVGIIKKDQLF------LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 + + ++ + P A+ G Sbjct: 284 IKATEIFRKHKKHYDEEAMAIVQKGFDPLDLPNLKFTPSTAESIAINERPGPAIVMAGNG 343 Query: 316 --------EMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 L +++ G I E + + VH Sbjct: 344 MCTAGRIKHHLKHNLWRPGSSLVIVGFQAQG--TTGRRIVEGASEVKIFRETVAVKAKVH 401 Query: 367 V----SGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 S H DL R +P+V IHGEP E ++ R Sbjct: 402 TIGGFSAHADQEDLLRWVGHFAESKPKVF-PIHGEPEACKVLAEKIQEKYGLETHVPRWR 460 Query: 420 KMLRLFPDPIEI----IDEVVHGLFLKDGFLIGKFADLGIAK-RRQLSF 463 + + L P ++ +E + + + + + I + RR L+ Sbjct: 461 ESILLTPKAVDYELPEQEEDMEPDYYAEMNNVIVSMEKNIRELRRTLNE 509 >gi|317419410|emb|CBN81447.1| DNA cross-link repair 1A protein [Dicentrarchus labrax] Length = 943 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 109/349 (31%), Gaps = 46/349 (13%) Query: 49 PGVDLVFPDITFIMKERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL 105 PG V + + I F+TH H DHYG L +P+Y + L+ Sbjct: 608 PGTKFVIDAFHYGE-----IEGITAYFLTHFHSDHYGG---LTKNSTLPIYCNRITGNLV 659 Query: 106 EAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + K + +V V ++ + NH M L ++HTGD Sbjct: 660 KTKLK----VAEQYIHILPMNTEVTVEGVTVILLEANHCPGAAMLLFFLPDGQTVLHTGD 715 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-- 223 ++ D + + + L D+T E T ++ + Sbjct: 716 FRADPSMETYP--------ELVSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELV 767 Query: 224 -AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS 282 LV S SV + + + +AE +G K+ L + + ++ Sbjct: 768 TLNPRTLVVCGSYSVGKEKVFLALAEVLGTKV-CLSRDKYNTMCCLESEHVKQRITTDWK 826 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 + P QL + + LA+ SR + V Sbjct: 827 AAQVHVLPMMQLSF------KKLQDYLARFSRQYDQLVAFKPTGW-------------TF 867 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + ++ + + S H ++KR QW++P ++ Sbjct: 868 SQQVESVEDIQPQISGNISIYGIPYSEHSSFLEMKRFVQWLQPLKIIPT 916 >gi|269102108|ref|ZP_06154805.1| metallo-beta-lactamase family protein RNA-specific [Photobacterium damselae subsp. damselae CIP 102761] gi|268162006|gb|EEZ40502.1| metallo-beta-lactamase family protein RNA-specific [Photobacterium damselae subsp. damselae CIP 102761] Length = 475 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 40/267 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +++ + G + + ++IDCG+ ++ P +D+ F DI+ Sbjct: 2 DKIDIIHHGAKDGVTGSCHQLQIEQDGFTSSLLIDCGLFQGRESRPNLDIEF-DIS---- 56 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 + A+ ITH H DH G + L + P++ + + LL Sbjct: 57 ---TVEALLITHCHIDHIGRIPWLLAKGFTGPIFTTEASAALLPLMLEDSLKLQLGLNKK 113 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAF---SIESVRVNHSIPETMALVIRSPVGN-IV 161 ER+ K+I + + + + +F SI H I + + I+ P +V Sbjct: 114 QCQKFIERIEKQIKPVPYHCWIQQRLASFDSVSIRFSPAGH-ILGSAFIEIKLPNRQVVV 172 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 +GD + +L D L+ +ST + + E+ + I Sbjct: 173 FSGDLGPTNTPLLVDPQSPY--------QADILVLESTYGYKPTHGVKERAL-HLFDIIH 223 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAE 248 ++ ++ + SV R + ++ E Sbjct: 224 RSLLDGGVILIPAFSVGRTQELLFDIE 250 >gi|91775735|ref|YP_545491.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709722|gb|ABE49650.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] Length = 455 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 70/493 (14%), Positives = 141/493 (28%), Gaps = 107/493 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------------SFPKDDLPG 50 ++ F G G + + + S + +++DCG+ FP D Sbjct: 1 MQISFF--GAAGTVTGS----KHLVTSGNRRVLVDCGLFQGLKVLRLKNWARFPID---- 50 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 + A+ +THAH DH G L L VY S + L + Sbjct: 51 --------------PATIDAVVLTHAHIDHTGYLPLLVRQGFRGKVYCSEVTLSLCQLLL 96 Query: 110 --------VYERVSKKIPCISFQA-----------------------GDKVDVGAFSIES 138 R + K + D + +++ Sbjct: 97 RDSAHLQEEEARYANKRGYSKHKPALPLYTKEDAEAALEHLVPLPVGRDVQILDGITVKL 156 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 H I ++++ +I+ +GD + D E L+ +S Sbjct: 157 QLAGH-ILGACTVLLKDEQTSILFSGDLG--------RMEDPLLFPPAPPEAADYLVVES 207 Query: 199 TNAMREGTC-ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR----- 252 T R E + + I +K G VLV F+ V R + ++ ++ + Sbjct: 208 TYGNRLHEKAAPEAQLAEVINRTVKRG-GSVLVPVFA--VGRAQEVLYYIHKLKQAGAIP 264 Query: 253 -KIVLLGSS-L---KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP-- 305 I + +S + ++ + ++ EP Sbjct: 265 ADIPVYLNSPMAVDATLIFLTHHAQHKLDAAQCRELAKVAKVVSTVEESMSLNELREPAI 324 Query: 306 ---RSALAQLSRGEMRN--VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 S +A R + ++TV+F+ G + + + Sbjct: 325 ILAASGMASGGRVVHHLKALGPDPRNTVLFAGFQAAG--TRGAALLDGAESVKIHGEYVP 382 Query: 361 AECPV----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + ++S H ++ + P+ +HGEP+ A + +E V Sbjct: 383 MRAEIASIDNLSAHADYQEIMQWLSQCPQPPKQTFIVHGEPVAADALRHRIEEERQWNVM 442 Query: 415 PVRNGKMLRLFPD 427 + + L Sbjct: 443 VPEYLQTVELDGK 455 >gi|121605197|ref|YP_982526.1| beta-lactamase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594166|gb|ABM37605.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 452 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 70/454 (15%), Positives = 131/454 (28%), Gaps = 106/454 (23%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L GS S +++DCG+ F + + + E + A Sbjct: 6 LGATDTVTGSKYLLRQGSSS----LLVDCGL-FQGYKQL----RLRNWSPLPVEPARIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + +THAH DH G L L VY SP L + Sbjct: 57 VILTHAHIDHSGYLPLLARQGFSGKVYCSPATFDLCSILLPDCGYLLEEEAEYLNRHKKS 116 Query: 122 SFQA--------GDKVDVGAFSIESVRV--------------NHSIPETMALVIRSPVGN 159 + + F + R + +P + + + + + Sbjct: 117 KHSPALPLYTQGDAQRCLKLFEPVAYRTGWQPAEGLRATLTPSGHMPGSSFVRLDNGTRS 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I+ +GD D EG L+ +ST R N+ + Sbjct: 177 ILFSGDIG--------RPNDLVLAAPSPMEGADYLVVESTYGDRLHKNTDVLLELANVIN 228 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G V++ F+ V R +S++ + + G+I + Sbjct: 229 RTAARGGVVVIPAFA--VGRAQSLLYC------------------IHLLKSQGVIHDLPV 268 Query: 280 FLSDESFGL----YPREQLIVIATGSQGEPRSALAQLSR--GEMRNVKLAEKDTVIFSSR 333 +L+ Y R + + T +Q + AQ+ E R + VI S+ Sbjct: 269 YLNSPMAANATHVYERHRAELRLTAAQCRAMAHSAQIVHTPEESRLLNARRGPMVIISAS 328 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECP----------------------------- 364 + + HIK ++ ++ + Sbjct: 329 GMATGGRVLHHIKAFAPDKRNTLLFAGYQAGGTRGATIAGGASTVRIFGEEVPIRAEVAM 388 Query: 365 -VHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 +S H ++ + + P+ HGEP Sbjct: 389 LSSLSAHADGAEIIEWLRNFKSAPRQTFITHGEP 422 >gi|283469251|emb|CAQ48462.1| YycJ protein [Staphylococcus aureus subsp. aureus ST398] Length = 260 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|52842469|ref|YP_096268.1| metallo-beta-lactamase superfamily protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629580|gb|AAU28321.1| metallo-beta-lactamase superfamily protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 472 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 139/445 (31%), Gaps = 74/445 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L S+ K I++DCG+ F +L + + + Sbjct: 21 MKLSF--LGATGTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLPV 69 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERV 114 K++ A+ +THAH DH G L L +YA+ L R Sbjct: 70 SPKSIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATAATTDLCSILLPDSGFLHEEDARR 129 Query: 115 SKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMAL 151 + K + + I R H I + + Sbjct: 130 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLMDDCEISWHRAGH-ILGSAFI 188 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 189 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKSTDYLVIESTYGNRLHDKTDPL 240 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VL+ F+ V R ++++ + + I + L + A Sbjct: 241 AFIANIVNTTCKRGGTVLIPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDA 298 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + + + + + + G Sbjct: 299 TELLLKHHNEHRLSAEECRAVCQIATYVHAPNESMAVDWERESKIIISASGMMTGGRVLH 358 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 359 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSVKIHGDDYPVRAQVATLTNASAHADY 418 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 ++ + P+ + HGEP Sbjct: 419 EEILIWLKHFEKAPKEVFITHGEPQ 443 >gi|187920288|ref|YP_001889319.1| beta-lactamase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718726|gb|ACD19949.1| beta-lactamase domain protein [Burkholderia phytofirmans PsJN] Length = 477 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG + + L I+IDCG+ F +L + + + Sbjct: 1 MKLTFLGGAETVTGSKYLVEASGMR----ILIDCGL-FQGTK----NLRLRNWSPLPVPV 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L PVY +P L + + Sbjct: 52 DTLDAVILTHAHIDHTGYLPVLARDGYRGPVYCTPGTAALCDIMLRDSAHLQEEEADFAN 111 Query: 117 KIPCISFQAG-------------DKVDVGAFSI----------ESVRVNHSIPETMALVI 153 + + + F + + H I ++V+ Sbjct: 112 RHGFSKHKPALPLYTLDDAQRALRLIVQREFDVPTPLNDELCFRFLPAGH-ILGAASVVL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + +GD + I+ L+ +ST R + Sbjct: 171 CWRHTVLAFSGDLGRPGNPIMRAPMKLA--------HADYLVVESTYGDRLHAATDPEEE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ G V++ F+ V R + I+ Sbjct: 223 LAELFARTFARGGVVVMPCFA--VGRAQEILYYIAH 256 >gi|329735759|gb|EGG72040.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU028] Length = 266 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I + K+L I +TH H DH L L Sbjct: 21 VESEKGSLLVDVGLTGKKMEEL--------FSQIDRNIKDLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F IES V+H + Sbjct: 73 ARKYKLPIYANENTWKAIEKKDSRIPMDQKFIFN---PYETKSLAGFDIESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|307354533|ref|YP_003895584.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157766|gb|ADN37146.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] Length = 257 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N I+ID G+S + + + +++ + I +TH H Sbjct: 12 GNCTYIE----GDSGAILIDAGLSTKE--------ILKRLDEAGGKKELIQGILLTHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + + L +PVYA+ + E KR + K + + + V I + Sbjct: 60 DHMKGVDVIARKLDIPVYATHGTLWQFEEKRKSD---KPVELKPCRKDEPFTVDGLKITA 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +H + +I I + D + Sbjct: 117 FSTHHDACDPCGFLIDESGSRIAYCTDTGM 146 >gi|307611100|emb|CBX00742.1| hypothetical protein LPW_24461 [Legionella pneumophila 130b] Length = 472 Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 72/474 (15%), Positives = 145/474 (30%), Gaps = 77/474 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L S+ K I++DCG+ F +L + + + Sbjct: 21 MKLSF--LGATGTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLPV 69 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERV 114 +++ A+ +THAH DH G L L +YA+ L R Sbjct: 70 SPESIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATAATTDLCSILLPDSGFLHEEDARR 129 Query: 115 SKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMAL 151 + K + + I R H I + + Sbjct: 130 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLIEDCEISWHRAGH-ILGSAFI 188 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 189 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKSTDYLVIESTYGNRLHDKTDPL 240 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VLV F+ V R ++++ + + I + L + A Sbjct: 241 AFIANIVNTTCKRGGTVLVPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDA 298 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + + + + + + G Sbjct: 299 TELLLKHHNEHRLSAEECRAVCQIATYVHTPNESMAVDWERESKIIISASGMMTGGRVLH 358 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 359 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSVKIHGDDYPVRAQVAMLTNASAHADY 418 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL---HLVAHKELALQEGIACVPPVRNGKML 422 ++ + P+ + HGEP L H E L + + Sbjct: 419 EEILVWLKHFEKAPKEVFITHGEPQAALGLKEHIEAELGWNCKIPNYLEKVNLD 472 >gi|307265367|ref|ZP_07546924.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919651|gb|EFN49868.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] Length = 542 Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 65/494 (13%), Positives = 128/494 (25%), Gaps = 93/494 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + + ++DCG+ + V+ FI Sbjct: 1 MKISFLGAAKEVTGSCYLVE----TEKTKFLVDCGMFQGGE----VEDELNYQEFIFDVA 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +THAH DH G + L+ +YA+ + L +++ Sbjct: 53 D-IDFVLLTHAHIDHSGRIPLLYKRGYRKRIYATKATVDLCRYMLPDSGHIQEMESEWKN 111 Query: 125 AGDKVDVGA--------------------------------FSIESVRVNHSIPETMALV 152 K + H + + + Sbjct: 112 RKRKRADKPLREPLYTADEAKDSLSIFYGVDYGEIIEPAQDVKVRFNDAGH-MLGSSIIE 170 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + IV +GD +L +VT + ++C+ST R I Sbjct: 171 VWVNEKGKETKIVFSGDVGNKKIPLLKEVT--------PIKSADYVLCESTYGNRLHEDI 222 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-----------GRKIVLL 257 ++ KK + I+K K V S +V R + ++ + V + Sbjct: 223 GDR-AKKLMEIIIKTVKRGGNVIIPSFAVGRTQELLYELHKNRELYKDEIEFLNNVPVYV 281 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE---------------------QLIV 296 S L ++ D G P + +I+ Sbjct: 282 DSPLATSITDVFTKHPEYLDSEAQDYIKRGDLPLDFPNLHFTHSVEESKALNEIKTPVII 341 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I+ E L + + + + KN + Sbjct: 342 ISASGMCEAGRIKHHL---KHNLWRPECTVLFVGYQAKGTLGRKLLEGEKNVKIFGEDIS 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + + E SGH + +P+ + +HGE + + Sbjct: 399 VKAEIEYIESFSGHADQKGILDWLSQFTDKPRKIFIVHGEDEAQEELADKIENQLGIETL 458 Query: 415 PVRNGKMLRLFPDP 428 D Sbjct: 459 IPSRYDTYNFEEDK 472 >gi|27364220|ref|NP_759748.1| Metallo-beta-lactamase family protein, RNA-specific [Vibrio vulnificus CMCP6] gi|27360338|gb|AAO09275.1| Metallo-beta-lactamase family protein, RNA-specific [Vibrio vulnificus CMCP6] Length = 446 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 76/458 (16%), Positives = 134/458 (29%), Gaps = 106/458 (23%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + ++IDCG+ G D P++ F +K + A+ Sbjct: 7 GGKDTVTGSCHEFRAAGIA----LLIDCGL------FQGKDARPPEVDFPVKH---IDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCI 121 +THAH DH G + L + +Y + L+ + ++ + Sbjct: 54 VLTHAHIDHIGRIPWLLAAGFSGSIYCTEATAELVPLMLEDGLRLQLGLNHKQLHQVLDL 113 Query: 122 SFQAGDKVDVGAF-------------------------SIESVRVNHSIPETMALVIRSP 156 + V G + + H + Sbjct: 114 VKKRLKPVKYGEWLRLTPRIKNGNRASRSVSHALENYLYLRFNPAGHILGSAYLEFKLPN 173 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 +V +GD + +L D L +ST + + E+ + Sbjct: 174 DEIVVFSGDLGPRNTPLLPDPISPPR--------ADYLYIESTYGDKLHESVEER--GER 223 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVV 265 + I+ + G +L+ FS V R + I + I+L KRV Sbjct: 224 LKSIINRSLQDGGTILIPAFS--VGRTQELLFDIEQLIFEHNIGTDIPIILDSPLAKRVT 281 Query: 266 SVAIDVGIIKKDQLFLSDESF------------GLYPREQLIVIATGSQGEP-------- 305 + + E Y + + +V S GEP Sbjct: 282 QSYRRFKKLWGKEAKRRLEVHRHPLAFEQCITIDDYRQHKALVNRLASTGEPAIVVAASG 341 Query: 306 -------RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 L L E +V A R I E + I+ ++VE ++ Sbjct: 342 MCQGGRIMDYLQALLPDERTDVLFAGYQASGTLGREIQTGEKMV-QIEQKMVEVRAQIHT 400 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 S H DL Q I +P+ + IHGE Sbjct: 401 MSG-----YSAHADQADLLAFIQGIAQKPKEIHLIHGE 433 >gi|70725023|ref|YP_251937.1| hypothetical protein SH0022 [Staphylococcus haemolyticus JCSC1435] gi|68445747|dbj|BAE03331.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 266 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 78/238 (32%), Gaps = 25/238 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N S + +++D G++ K + + I + Sbjct: 6 RMSVLASGSTG----NATYVE----SDKGSLLVDVGLTGKKMEDL--------FSQIDRN 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K+L I +TH H DH L L +P+YA+ +E K + F Sbjct: 50 IKDLNGILVTHEHSDHIKGLGVLARKYGLPIYANENTWKAIEKK---DSKIPMDQKFIFN 106 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 + + F IES V+H + + + D + D + +D Sbjct: 107 PYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFM 166 Query: 183 LCAIGNEGILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +L + + + +S + + D++ + ++ S Sbjct: 167 FESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 224 >gi|225572894|ref|ZP_03781649.1| hypothetical protein RUMHYD_01085 [Blautia hydrogenotrophica DSM 10507] gi|225039759|gb|EEG50005.1| hypothetical protein RUMHYD_01085 [Blautia hydrogenotrophica DSM 10507] Length = 532 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 70/498 (14%), Positives = 150/498 (30%), Gaps = 99/498 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + Y ++ K ++DCG+ D V++ Sbjct: 1 MKITFIGATHEVTGSC----YYLEAAGKKFLVDCGMEQGPDYYENVEIPV--------NL 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV-------------- 110 + + +THAH DH G + +++ PVYA+ L + Sbjct: 49 GEVDFLLLTHAHIDHSGNIPAIYAKGFQGPVYATEATCDLCDIMLRDSAHIQMFEAEWRN 108 Query: 111 -----------------YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALV 152 + + + + G + + + + H + + ++ Sbjct: 109 RKGRRSGKPEFVPAYTMEDAMGVLKNFVGCEYGKIIHLSEGIRVRFIDAGHLM-GSASIE 167 Query: 153 IR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I IV +GD + ++ D T + ++ +ST R Sbjct: 168 IWLKEDGKEEKIVFSGDIGNTEQPLIKDPTYLEE--------ADYVVMESTYGDRNHGER 219 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + K + + I G V++ +F+ V R + ++ QI ++ G Sbjct: 220 PDYVKSLAEIIQRTFDRG-GNVVIPSFA--VGRTQEMLYFIRQIKEDRLVQG---HENFP 273 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEK 325 V +D + + ++ Y E +I G S L ++ + + + E Sbjct: 274 VYVDSPLANEATTIFAEHYLDCYDEEATELIQRGINPIGFSGLKVSITSDDSKGINFDES 333 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH------------------- 366 VI S+ + H+K+ L ++ + Sbjct: 334 CKVIISASGMCDAGRIKHHLKHNLWNPKSTILFVGYQAVGTLGRALVEGASEVKLFGEEI 393 Query: 367 -----------VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 +SGH L + +P+ + HGE + +E Sbjct: 394 QVNAQICVLPGISGHADNEGLMKWASSFRQKPKKVFVTHGEDKVTELFAQRLREELGYDT 453 Query: 414 PPVRNGKMLRLFPDPIEI 431 +G + L + E Sbjct: 454 MAPFSGTVYDLANNVCEY 471 >gi|46107872|ref|XP_380995.1| hypothetical protein FG00819.1 [Gibberella zeae PH-1] gi|110283025|sp|Q4IPN9|YSH1_GIBZE RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 Length = 864 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 93/296 (31%), Gaps = 61/296 (20%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG----------VSFPKD-DLPGV 51 ++EL+FL LGG E+G + + Y K +M+D G + F D DL V Sbjct: 22 SDELMFLCLGGGNEVGRSCHIIQY----KGKTVMLDAGQHPAYDGLAALPFYDDFDLSTV 77 Query: 52 DLVF---P--DITFIMKERKNLMAI--------FITH-AHEDHYGALHDLWSF--LHVPV 95 D++ P D T + + + I H H DH +L + + V Sbjct: 78 DVLLISHPVQDTTALYCHGQYCACVMSISMIMLLIGHSFHIDHAASLPYVLAKTNFRGRV 137 Query: 96 YASPFAIGLLEAKRV-------------------YERVSKKIPCIS-FQAGDKVDVGAFS 135 + + + + + P I + + Sbjct: 138 FMTHPTKAIYKWLIQDSVRVGNTSSNPTTQPVYTEQDHLNTFPQIEAIDYHTTHTISSIR 197 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GILAL 194 I H + +I NI TGD+ + D L + I L Sbjct: 198 ITPYPAGH-VLGAAMFLIEIAGLNIFFTGDYSREQDRHLVS-------AEVPKGVKIDVL 249 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + +ST + E+ + + I V ++ R + ++ I ++ Sbjct: 250 ITESTYGIASHVPRLERE-QALMKSITSILNRGGRVLMPVFALGRAQELLLILDEY 304 >gi|15640293|ref|NP_229920.1| hypothetical protein VC0264 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586320|ref|ZP_01676109.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153818482|ref|ZP_01971149.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821803|ref|ZP_01974470.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080479|ref|YP_002809030.1| hypothetical protein VCM66_0249 [Vibrio cholerae M66-2] gi|229506939|ref|ZP_04396447.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae BX 330286] gi|229509310|ref|ZP_04398793.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae B33] gi|229516256|ref|ZP_04405704.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC9] gi|229606450|ref|YP_002877098.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae MJ-1236] gi|298500900|ref|ZP_07010702.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9654673|gb|AAF93439.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549440|gb|EAX59468.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|126510958|gb|EAZ73552.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520699|gb|EAZ77922.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227008367|gb|ACP04579.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229346682|gb|EEO11652.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC9] gi|229353625|gb|EEO18562.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae B33] gi|229356044|gb|EEO20963.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae BX 330286] gi|229369105|gb|ACQ59528.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae MJ-1236] gi|297540404|gb|EFH76463.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 455 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 130/444 (29%), Gaps = 89/444 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 17 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFALGHV 67 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC-- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 68 DALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERV 127 Query: 121 --------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 V + H I + + IR P +V +GD Sbjct: 128 LTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDL 186 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 187 GPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLT 236 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 237 DGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLW 294 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 + + + + + R S GE V A Sbjct: 295 GREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDY 354 Query: 334 ------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPN 374 + G E +G E + +H S H Sbjct: 355 LKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKA 414 Query: 375 DLKRMYQWI--RPQVLVAIHGEPL 396 DL R I +P+ + IHGE Sbjct: 415 DLLRFITGIPEKPKQVHLIHGEAP 438 >gi|328950114|ref|YP_004367449.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] gi|328450438|gb|AEB11339.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] Length = 447 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 87/274 (31%), Gaps = 53/274 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + P G G + + L + +++DCG+ D+ + Sbjct: 1 MRLYPCGAAGTVTGSAHLVEHQGYR----LLLDCGLYQGADEEK-------NTEPFPFAP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------EAKR 109 + + A+ ++HAH DH G L L VYA+P + L+ E Sbjct: 50 REVDAVVLSHAHLDHVGRLPLLVRQGYAGRVYATPPTLRLVPLILEDALGVMTHEHERAL 109 Query: 110 VYERVSKKIPCISFQAGDKV------------DVGAFSIESVRVNHSIPETMALVIRSPV 157 + + V G F++ H I + + + + Sbjct: 110 RKGLEPPPLLWTEADLQEAVGRLEPLPYYTPRAFGPFTVTLRNAGH-IAGSAFVEVVADG 168 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 +V +GD +L D ++ + T R + +++ Sbjct: 169 KRLVFSGDLGNRRKELLPDPDYPPR--------ADLVLSEGTYGDRAHR-PFQSTLEEFA 219 Query: 218 YDIMKN--AKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + K A G VL+ +F+ + R + ++ + Sbjct: 220 EILTKTLAAGGKVLIPSFA--MERAQELLFHIRE 251 >gi|229069339|ref|ZP_04202629.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus F65185] gi|228713826|gb|EEL65711.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus F65185] Length = 417 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 52/445 (11%), Positives = 132/445 (29%), Gaps = 70/445 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMA 70 GG GE G + Y + I+ DCG++ ++ P ++ + L A Sbjct: 5 GGAGEYGRSC----YFVKNKETKIVFDCGINRSYENGYPKIE---------REAVPFLDA 51 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG---LLEAKRVYER------------- 113 +F++H HEDH L L + ++ + + L K Sbjct: 52 VFLSHIHEDHTMGLPLLAKYGYKKKIWTTRYTKEQLPLYYEKWRNYNVMQGWNLPYSDQH 111 Query: 114 ---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + + + + + + ++ + ++GD+ + Sbjct: 112 IKDLNYVCIDEISNPNEWLQITPTLRFQWGYSGHVLGAVWFLVDMCNTYVFYSGDYSAES 171 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + +L I + D+ + + +I + + + Sbjct: 172 NIL------RANLPEKLGHNIKVAIVDAAY--HTDDVSQNERLDDLCAEIERVMQNEGIA 223 Query: 231 TTFSSSVSRIRSIIDIAEQ--------------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + R + I+ + G + + + + + K Sbjct: 224 LLPLPQLGRAQDIVLYLYERYKEFPLIVDKEILAGFEEMFIYKGWIKNNEELKWIMESLK 283 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 + + D + ++V++ + R+ L ++ +++ VIF+ Sbjct: 284 RNIIVMDNDISMQNSYGIVVMSDANMQTKRAQLY------YEQLRNEKRNAVIFTGHIAK 337 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 G+ V + V H D+K M + P+ V +H Sbjct: 338 GSF--------AEKVMKEHVRSTCRVKRVPYKVHQSIRDVKEMLNTLLPEHTVLVHALKE 389 Query: 397 HLVAHKELALQEGIACVPPVRNGKM 421 ++ G V + ++ Sbjct: 390 DTDRLQQKLSTAGYENVYSLAMERI 414 >gi|320335819|ref|YP_004172530.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757108|gb|ADV68865.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 483 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 91/278 (32%), Gaps = 58/278 (20%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 G + + L ++IDCG+ DDL ++ ++L Sbjct: 4 TSFGAAETVTGSCHLLEVAGTR----VLIDCGLYQGDDDLEALNREPFPFD-----VRSL 54 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------------E 106 A+ +THAH DH G L L P+Y +P L Sbjct: 55 DAVLLTHAHLDHVGRLPVLTRLGYRGPIYCTPATAALAGIVLLDSARLQVEDYRRDVRKA 114 Query: 107 AKRVYERVSKKIPCISFQAG-------------DKVDVGAFSIESVRVNHSIPETMALVI 153 + E + + + VG + R H I + L++ Sbjct: 115 RRVGEEDRVPEPLYDEDDVHTVQALLRPQLEFGETLSVGNVRVTPGRAGH-ILGSAYLLL 173 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 +P G ++ +GD + + D T + L+ ++T A R +++ Sbjct: 174 DTPDGRLLMSGDLGNRESGLQQDFT--------LPPHVDVLVTETTYADRTHRPLTQTLA 225 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G +L+ TF+ + R ++I+ + Sbjct: 226 EFTDALQRSVARG-GKILIPTFA--IERTQAILYYLKH 260 >gi|153801549|ref|ZP_01956135.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229521020|ref|ZP_04410441.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TM 11079-80] gi|229527238|ref|ZP_04416631.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae 12129(1)] gi|124122954|gb|EAY41697.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229335246|gb|EEO00730.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae 12129(1)] gi|229341905|gb|EEO06906.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TM 11079-80] Length = 455 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 130/442 (29%), Gaps = 89/442 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 17 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFALGHV 67 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC-- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 68 DALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERV 127 Query: 121 --------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 V + H I + + IR P +V +GD Sbjct: 128 LTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDL 186 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 187 GPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLT 236 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 237 DGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLW 294 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR-- 333 + + + + + R S GE V A Sbjct: 295 GREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDY 354 Query: 334 ------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPN 374 + G E +G E + +H S H Sbjct: 355 LKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKA 414 Query: 375 DLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 415 DLLRFITGIPEKPKQVHLIHGE 436 >gi|86608223|ref|YP_476985.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556765|gb|ABD01722.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 595 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 69/467 (14%), Positives = 136/467 (29%), Gaps = 74/467 (15%) Query: 1 MKNEE--LVFLPLG------GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPG 50 M++E L LPLG G Y +++DCG+ P LPG Sbjct: 1 MESERPPLRLLPLGTDPRQQGC----------AYWLEIGSHRLLLDCGLPAPALFKALPG 50 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR 109 + PD A+ +HAH DH L VP+YA+P L Sbjct: 51 I----PD------------AVICSHAHFDHVQGLPAFHRRYPQVPLYATPVTAHLAAGLW 94 Query: 110 VYERVSKKIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMALVIRS----PVG 158 I F + +G + H +P A ++++ P Sbjct: 95 ECGVWPGYDRDIRFPPFRALPLGRAREILPHLMLTFFAAGH-LPGAAATLLQNTQTTPAQ 153 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 V+TGD L + D +L +L + + E + + + Sbjct: 154 ACVYTGDCSLASTRFAPGL-DLIAL-RHWQPDVLLIEASLGSTRHPPRRHLENRLVERLL 211 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI-------VLLGSSLKRVVSVA-ID 270 ++ + + + + +I + + R + + L ++ Sbjct: 212 SALEAGQTVLF---PLPVLGLGQELIFLLKAHHRFTQAPQELKIWVAPGLAAGCNLYERL 268 Query: 271 VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 + + + + + + ++ +P L + + Sbjct: 269 LTYLPEPVRNFATYQPLFWEDRLQPRVQPLTEADPLPQGLLLCDAD-----AGPEAWDPI 323 Query: 331 SSRAIPGNEVAI-------GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 SR + + + + + + A + H L ++ Sbjct: 324 WSRLLAQPQRSCLLVRLPEVELATPFERWPAPLRSRIAVEWITWHSHNDVGHLTQIIHTF 383 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 RPQ LV +H +P +L V + G L L ++ Sbjct: 384 RPQHLVLVHADPKQAQDLADLPELCNRYHVHCPQPGHWLELPDGHLQ 430 >gi|254467745|ref|ZP_05081152.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] gi|206684182|gb|EDZ44668.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] Length = 460 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 83/277 (29%), Gaps = 54/277 (19%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L F LG G + + L G R +++DCG+ + P Sbjct: 8 RLRF--LGAAGTVTGSRYLIEAG----RHRVLVDCGL-YQGYKQLRRRNRKPFP----VR 56 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL------------------L 105 ++ AI +THAH DH G L L PVY +P L Sbjct: 57 PGSITAILLTHAHLDHSGYLPALIRSGCQAPVYCTPPTRDLCGLLLPDSGRLQEEEAQHA 116 Query: 106 EAKRVYERVSKKIPCISFQAG---DKVDVGAFSI----------ESVRVNHSIPETMALV 152 K A + F + E +R H + + Sbjct: 117 RRKGYSRHKRPSPLYTEQDARAALRRFKTHPFGVPLDLGGGLSAEFIRAGH-LLGAAQIR 175 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + + +GD D D ++ G L+C+ST R +S + Sbjct: 176 VSIGGKTVHFSGDLGQDRDPLMPPP--------DPFPGADVLVCESTYGDRLHPAVSPED 227 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 I KG VL+ F+ V R + I + Sbjct: 228 ELAGILAPFLKQKGIVLIPAFA--VGRAQGITYHLSR 262 >gi|297567075|ref|YP_003686047.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] gi|296851524|gb|ADH64539.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] Length = 450 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 83/273 (30%), Gaps = 48/273 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + P G + + L S K +++DCG +D D F E Sbjct: 1 MRITPYGAAQTVTGSCHLVETFSKGGYK-LILDCGAYQGAED----DRNAQPFGF---EP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--------LEAKRVYERVSK 116 + A+ I+HAH DH G L L +Y S + L + Sbjct: 53 NTVNAVVISHAHHDHIGRLPILIRRGYRGQIYLSEPTLRFLPVILEDSLRLMTEEHERGE 112 Query: 117 KIPCISF-------------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + ++ G F++ H +P + + +R Sbjct: 113 RSGRKIPELLWDQADLNELYQRLEPVPLHQELAFGPFTLRLRGAGH-LPGSAFIEVREGK 171 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KN 216 ++ +GD +L D D ++C+ T R E + Sbjct: 172 QCLIFSGDLGNRSKEVLPDPEDP--------PSADLVLCEGTYGDRPHRPFDETIAEFAQ 223 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G V + +F+ + R + ++ + Sbjct: 224 VLGEHLSQGGKVFIPSFA--LERAQEVLYHLRE 254 >gi|262172629|ref|ZP_06040307.1| metallo-beta-lactamase family protein RNA-specific [Vibrio mimicus MB-451] gi|261893705|gb|EEY39691.1| metallo-beta-lactamase family protein RNA-specific [Vibrio mimicus MB-451] Length = 438 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 134/447 (29%), Gaps = 98/447 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + S + ++IDCG+ F + +D +L Sbjct: 7 GGKESVTGSC----HELRSDGQALLIDCGL-FQGADERSLEIDFAV----------NHLN 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC--- 120 + +THAH DH G L L + + P++ + L+ +S K Sbjct: 52 GLVLTHAHIDHIGRLPWLLAAGFNQPIFCTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 121 -------ISFQAGDKVDVGAFS-----IESVRVNHSIPETMALVIRSP-VGNIVHTGDWK 167 + I H I + + IR P +V +GD Sbjct: 112 TQVRRLLRVQDYQKWFALQPKRADSLCIRFQPAGH-ILGSAYVEIRLPNGEVVVFSGDLG 170 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + +++ + Sbjct: 171 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GDRLRVMIERSLSD 220 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLG-------SSLKRVVSV-- 267 G +L+ FS V R + ++ EQ I+L S +R + Sbjct: 221 GGAILIPAFS--VGRTQELLFDIEQLIFSHQIDANLPIILDSPMAQRVTRSYRRFKQLWG 278 Query: 268 ------AIDVGIIKKDQLFLSDESFGLYPR--------EQLIVIATGS----QGEPRSAL 309 + ++ E + R + ++ S G L Sbjct: 279 REAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 338 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 L E ++ LA R I E ++ I VE + S Sbjct: 339 KALLPDERTDLILAGFQAEGTLGRKIQSGEQSVW-IDGDEVEVKAHIHTMSG-----YSA 392 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGE 394 H DL R I +P+ + IHGE Sbjct: 393 HADQADLLRFITGIAEKPKQVHLIHGE 419 >gi|153818271|ref|ZP_01970938.1| cleavage and polyadenylation [Vibrio cholerae NCTC 8457] gi|255744070|ref|ZP_05418024.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholera CIRS 101] gi|262161959|ref|ZP_06030976.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae INDRE 91/1] gi|126511160|gb|EAZ73754.1| cleavage and polyadenylation [Vibrio cholerae NCTC 8457] gi|255738335|gb|EET93726.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholera CIRS 101] gi|262028337|gb|EEY46993.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae INDRE 91/1] Length = 438 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 130/443 (29%), Gaps = 86/443 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + + + ++IDCG+ F + V+ ++ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGL-FQGADERPLAVEFAL----------GHVD 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC--- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 52 ALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 121 -------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWK 167 V + H I + + IR P +V +GD Sbjct: 112 TEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDLG 170 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 171 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTD 220 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 221 GGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWG 278 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR--- 333 + + + + + R S GE V A Sbjct: 279 REAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 338 Query: 334 -----------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPND 375 + G E +G E + +H S H D Sbjct: 339 KALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKAD 398 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 L R I +P+ + IHGE Sbjct: 399 LLRFITGIPEKPKQVHLIHGEAP 421 >gi|116251650|ref|YP_767488.1| beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256298|emb|CAK07379.1| putative beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 544 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 90/287 (31%), Gaps = 58/287 (20%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDIT 59 M N L F G G + + L G I+IDCG+ ++ FP +T Sbjct: 1 MANPILHFH--GAAGSVTGSSFLLETGGAR----ILIDCGMFQGSKSEKELNYKPFPFVT 54 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK- 117 + A+ +THAH DH G L L P+YA+P I L ++ Sbjct: 55 ------SRIDAVLLTHAHIDHSGLLPKLAKAGYGGPIYATPATIDLCTIMLQDSGHIQES 108 Query: 118 ------------------------------IPCISFQAGDKVD-VGAFSIESVRVNHSIP 146 I+ + G+ + VG H + Sbjct: 109 EVRQLNRRNRRRARETVEPIYTADDARSMLPQFIAVEYGEWRETVGGLRFRYWNAGHLMG 168 Query: 147 ETMA---LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 I+ +GD + + G+ L+C+ST R Sbjct: 169 SASIEVETAGADGATRILFSGDVGASNKLFENLP--------LAPSGVDYLICESTYGDR 220 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS-SVSRIRSIIDIAEQ 249 E + K + + +++ ++ V S +V R + ++ Sbjct: 221 EREEYALKDRRDRLREVVASSNSPGGVLLIPSFAVERTQEVLTDLVA 267 >gi|323440403|gb|EGA98116.1| metallo-beta-lactamase family protein [Staphylococcus aureus O11] gi|323443117|gb|EGB00736.1| metallo-beta-lactamase family protein [Staphylococcus aureus O46] Length = 260 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + F + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKK---DSRIPTDQKFIFNPYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|54298153|ref|YP_124522.1| hypothetical protein lpp2210 [Legionella pneumophila str. Paris] gi|53751938|emb|CAH13362.1| hypothetical protein lpp2210 [Legionella pneumophila str. Paris] Length = 452 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 66/445 (14%), Positives = 135/445 (30%), Gaps = 74/445 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L S+ K I++DCG+ F +L + + + Sbjct: 1 MKLSF--LGATGTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 K++ A+ +THAH DH G L L +YA+ L + Sbjct: 50 SPKSIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATGATTDLCSILLPDSGFLHEEDARR 109 Query: 123 FQAGDKVDVGA-------------------------------FSIESVRVNHSIPETMAL 151 I R H I + + Sbjct: 110 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLMEDCEISWHRAGH-ILGSAFI 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 169 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKSTDYLVIESTYGNRLHDKTDPL 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VL+ F+ V R ++++ + + I + L + Sbjct: 221 AFIANIVNTTCKRGGTVLIPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDT 278 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + G + + + + + G Sbjct: 279 TELLLKHHNEHRLSAEECRAVCQIATYVHTPNESMAVDWGRESKIIISASGMMTGGRVLH 338 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 339 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSVKIHGDDYPVRAQVAMLTNASAHADY 398 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 ++ + P+ + HGEP Sbjct: 399 EEILVWLKHFEKAPKEVFITHGEPQ 423 >gi|157694427|ref|YP_001488889.1| metallo-beta-lactamase family protein [Bacillus pumilus SAFR-032] gi|157683185|gb|ABV64329.1| metallo-beta-lactamase family protein [Bacillus pumilus SAFR-032] Length = 264 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + V+L+ + I ++ ++L IF+TH H DH L Sbjct: 17 FYLETGEHAFLVDAGLS--GKQM--VELL----SQIDRKPEDLDGIFVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +PVYA+ +A + F G +ES V+H Sbjct: 69 VMARKYKLPVYANAKTW---KAMESHIGKIDTEQKFHFDMETVQSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + + + + G+L + Sbjct: 126 AEPMFYVFHYGGRKLALMTDTGYVSDRMKGIIQSANTFVFESNHDVGMLQMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ +A + + S Sbjct: 186 RILSDVGHVSNEDAALAMTDVIGDATSRIYLAHLSQD 222 >gi|89072759|ref|ZP_01159324.1| hypothetical protein SKA34_19554 [Photobacterium sp. SKA34] gi|89051579|gb|EAR57033.1| hypothetical protein SKA34_19554 [Photobacterium sp. SKA34] Length = 457 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 102/290 (35%), Gaps = 46/290 (15%) Query: 25 GYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + +++DCG+ ++ D I + K + A+ ITH+H DH G Sbjct: 16 CHELVIGNSSLLVDCGLFQGAENKNNKFD--------IEFDVKRIEALLITHSHIDHIGR 67 Query: 84 LHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV----------- 131 + L + P+YA+ LL + + ++ S Q + + Sbjct: 68 IPWLLAAGFTGPIYATEATAALLPLML-EDGLKIQLGFNSQQCKQFIQLIQQKIRPVPYD 126 Query: 132 ----------GAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLDDDAILGDVTDK 180 + S+ + H I + + + P NI V +GD + +L TD Sbjct: 127 CWAKVVLLNGDSVSVRFRQAGH-ILGSAYIEVELPDQNIAVFSGDLGPCNTPLL---TDP 182 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSR 239 + E L+ +ST + ++ + + I + G +L+ FS V R Sbjct: 183 -----VSPEKADLLVIESTYGDKALHDTQQREVHLRKIIEHSLQDGGAILIPAFS--VGR 235 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 + ++ E I VL GSS + +I L L + Sbjct: 236 TQELLFDIENI-LADVLTGSSHDNTYRCWKSLPVILDSPLALKVTEQYRH 284 >gi|148359800|ref|YP_001251007.1| metallo-beta-lactamase superfamily transporter protein [Legionella pneumophila str. Corby] gi|148281573|gb|ABQ55661.1| metallo-beta-lactamase superfamily protein [Legionella pneumophila str. Corby] Length = 452 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 65/445 (14%), Positives = 135/445 (30%), Gaps = 74/445 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG + + L S+ K I++DCG+ F +L + + + Sbjct: 1 MKLSF--LGATSTVTGSKYLVE----SNNKKILVDCGL-FQGLK----ELRLRNWSPLPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 +++ A+ +THAH DH G L L +YA+ L + Sbjct: 50 SPESIDAVVLTHAHIDHSGYLPLLVKQGFKGRIYATAATTDLCSILLPDSGFLHEEDARR 109 Query: 123 FQAGDKVDVGA-------------------------------FSIESVRVNHSIPETMAL 151 I R H I + + Sbjct: 110 ANKYGYSKHHPALPLYTQEDANNTLKYFESVEYDTPYPLMEDCEISWHRAGH-ILGSAFI 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ ++ +GD + D + + L+ +ST R Sbjct: 169 QFQTKQIKLLFSGDIG--------RLNDPVMKPSELMKSTDYLVIESTYGNRLHDKTDPL 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE--QIGRKIVLLGSSLKR-VVSVA 268 NI + G VL+ F+ V R ++++ + + I + L + A Sbjct: 221 AFIANIVNTTCKRGGTVLIPAFA--VGRAQTMLYYLYILKQKKLIPDVPVYLDSPMAIDA 278 Query: 269 IDVGIIKKDQLFLSDESFG--------LYPREQLIVIATGSQGEPRSALAQLSRG----E 316 ++ + ++ LS E ++ + + + G + + + + + G Sbjct: 279 TELLLKHHNEHRLSAEECRAVCQIATYVHTPNESMAVDWGRESKIIISASGMMTGGRVLH 338 Query: 317 MRNVK-LAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 V T++ + G E + H + + + + S H Sbjct: 339 HLKVYAPDPASTILLTGFQAAGTRGEKMLNHEPSIKIHGDDYPVRAQVAMLTNASAHADY 398 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 ++ + P+ + HGEP Sbjct: 399 EEILVWLKHFEKAPKEVFITHGEPQ 423 >gi|327483137|gb|AEA77544.1| Metallo-beta-lactamase family protein, RNA- specific [Vibrio cholerae LMA3894-4] Length = 438 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 130/441 (29%), Gaps = 86/441 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + + + ++IDCG+ F + V+ ++ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGL-FQGADERPLAVEFAL----------GHVD 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC--- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 52 ALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 121 -------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWK 167 V + H I + + IR P +V +GD Sbjct: 112 TEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDLG 170 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 171 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTD 220 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 221 GGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWG 278 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR--- 333 + + + + + R S GE V A Sbjct: 279 REAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 338 Query: 334 -----------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPND 375 + G E +G E + +H S H D Sbjct: 339 KALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKAD 398 Query: 376 LKRMYQWI--RPQVLVAIHGE 394 L R I +P+ + IHGE Sbjct: 399 LLRFITGIPEKPKQVHLIHGE 419 >gi|163783204|ref|ZP_02178198.1| RNA-metabolising metallo-beta-lactamase [Hydrogenivirga sp. 128-5-R1-1] gi|159881538|gb|EDP75048.1| RNA-metabolising metallo-beta-lactamase [Hydrogenivirga sp. 128-5-R1-1] Length = 458 Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 54/469 (11%), Positives = 122/469 (26%), Gaps = 97/469 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + P G + + L ++IDCG+ +++ + E Sbjct: 3 IRITPCGAARTVTGSCHLVE----VEGTKLLIDCGMFQGEEEEK-------NYEPFPFEP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE------------ 112 + + +THAH DH G + L + + + + + Sbjct: 52 GEIDFLILTHAHIDHCGRIPLLVKEGFKGKILCTRPTAQIAKIMLLDAAKVMHETYRSRL 111 Query: 113 -------RVSKKIPCISFQAGDKVDV---------------GAFSIESVRVNHSIPETMA 150 V D + + H I + Sbjct: 112 KKAERLGEVVNPPLYEELDVLDSFEFFSTPYLEYEREYQLGKELRVTLWDAGH-ILGSSF 170 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCI 208 + ++ +GD I+ D + + ++T R Sbjct: 171 VELKVKDKVFTFSGDLGNRGKPIVRDPSQP--------PPSDYVFIETTYGDRNHRSFKE 222 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-IGRKIV------------ 255 S++ + + + G VL+ +++ + R + ++ + + R I+ Sbjct: 223 SKEEFEDAVLKTLYRG-GNVLIPSYA--LERAQDVLFVLREMYERDILPECQVFLDSPLA 279 Query: 256 ------------LLGSSLKRVV--SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG- 300 R+ +K + + +I+ +G Sbjct: 280 INATKIFLQNPEFFDRETYRIFKERDPFSFPYLKFTRDVEESKKINDIKSGAVIIAGSGM 339 Query: 301 -SQGEPRSAL-AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 + G L L R E + + + + + G I + V Sbjct: 340 LTGGRILHHLKHNLWREECSLIFVGYQPKGTLGRKIVDG--ADRVKILGEEIAVKAEVYT 397 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQ 407 + S H +L + +PQ +HGE + E + Sbjct: 398 ING-----FSSHADQRELTQWLSHAKPQKAFLVHGEEDKMAVFSEHIKK 441 >gi|145423870|gb|ABP68569.1| YycJ [Staphylococcus sciuri] Length = 260 Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 76/215 (35%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + I + +L I +TH H DH L L Sbjct: 15 IESDKGSLLVDAGLTGKKIEGL--------FQQIDRNISDLEGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ ++E K + +K F+ + + IES V+H + Sbjct: 67 ARKYKLPIYANKKTWQMIEVKDKNIPLDQKFH---FEPYETKTLAGMDIESFSVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + + D + D + +D + + +L + Sbjct: 124 PQFYIFNNDYKKLTMITDTGYVSDRMKGMIHGSDAFVFESNHDVDMLRMGRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + ++ S Sbjct: 184 LSDMGHVSNEDAAHAMCDVITGSTKRIYLSHLSQD 218 >gi|326383330|ref|ZP_08205018.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326198080|gb|EGD55266.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 455 Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 89/276 (32%), Gaps = 52/276 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMK 63 L F LG G + + L + I+IDCG+ G+ +L + + Sbjct: 3 TLSFTSLGAAGTVTGSKHLLE----RDGRMILIDCGL------FQGIKNLREANWRPLPV 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA------------------IGL 104 + + L A+ +THAH DH G L L P+Y++P L Sbjct: 53 DAEALDAVIVTHAHLDHTGYLPRLVREGFRGPIYSTPATRDVADIILRDSAHLQEREAAL 112 Query: 105 L-EAKRVYERVSKKIPCISFQAGDKVDV------GAFSI-----ESVRVNHSIPETMALV 152 + + ++ + ++ +FS R I + Sbjct: 113 ANKHRSSRHSPARPLYDVNDVEQTMAQFHTRATGKSFSPAREVRALFRGAGHILGAATVE 172 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + + +GD DD + + D + + A L+C+ST R Sbjct: 173 VEWGGVTVAFSGDLGRYDDPL---MFDPEPIPA-----ADYLVCESTYGDRLRDDSDPAD 224 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + G V++ F+ V R + I+ Sbjct: 225 ELLRVITETAGRGGTVVIPAFA--VGRTQMILYYLW 258 >gi|289523960|ref|ZP_06440814.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502616|gb|EFD23780.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 527 Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 87/510 (17%), Positives = 152/510 (29%), Gaps = 91/510 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G GE+ + L + K ++IDCG+ G D + + + A+ Sbjct: 7 GAAGEVTGSNYLLEH----DEKRVLIDCGI------FQGRDEDRKNSEPFPFDASKVDAL 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------AKRVYERVSKKI----- 118 +THAH DH G + L +YA+ + L E E K Sbjct: 57 LLTHAHLDHSGRVPLLVKRGFRGKIYATTPTLELCEILWRDSARLMKEEAEWKSRKNRRK 116 Query: 119 -------------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVG 158 + D ++ + H I + + I + Sbjct: 117 GLPPVYPLFSEKEIERALEMFVPVSYDDVIEAMPDIKVRFRDAGH-ILGSAIIEIWAGKD 175 Query: 159 NI--VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIK 214 +I V +GD + VT D A+ ++ ++ +ST R + E + Sbjct: 176 SIKLVFSGD-------LGQQVTVLDRNPAVIDD-ADYVIIESTYGDRNHKSLDETREEFA 227 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ---------------IGRKIVLLGS 259 I + +++ ++ T V RI ++I ++ +G K + Sbjct: 228 SVIAESLRDRSKVLIPTFVVDRVQRILYELNILQERGILKDNVSIYFDSPMGVKTTEIYR 287 Query: 260 SLKRVVSVAIDVGIIKKDQLF--------LSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 ++S I + K F +S E ++ GS + + Sbjct: 288 KYSSLLSAEIQDKLFKNQDPFAPRGLKEVISPEESKKINDVSFAIVLAGSG---MANGGR 344 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV---- 367 + N+ K VIF+ G I + V +C H Sbjct: 345 IVHHLKHNLW-NPKAHVIFAGYQAAG--TLGRKIIDGARFVKVAGEEVAVKCKYHTIGGF 401 Query: 368 SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 S H +DL + P +V E EL A VP L Sbjct: 402 SAHADKDDLLAWASNFKTNPTFIVTHGEERSSNSLADELRKLGSQALVPQRGYEMSLDRG 461 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 +E E+ + I K DL + Sbjct: 462 RSTVEKRVEIPAERPPLEVQYILKDMDLLL 491 >gi|253733817|ref|ZP_04867982.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|297209430|ref|ZP_06925828.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297589179|ref|ZP_06947820.1| beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|300911454|ref|ZP_07128903.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|304379970|ref|ZP_07362699.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253728120|gb|EES96849.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|269939548|emb|CBI47906.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus TW20] gi|296885891|gb|EFH24826.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297577690|gb|EFH96403.1| beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|300887633|gb|EFK82829.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|302749933|gb|ADL64110.1| metallo-beta-lactamase hydrolase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341550|gb|EFM07460.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436837|gb|ADQ75908.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH60] gi|312828585|emb|CBX33427.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|329312746|gb|AEB87159.1| Beta-lactamase domain protein [Staphylococcus aureus subsp. aureus T0131] Length = 260 Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|157818805|ref|NP_001099671.1| DNA cross-link repair 1A protein [Rattus norvegicus] gi|149040461|gb|EDL94499.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) (predicted) [Rattus norvegicus] Length = 1026 Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 108/326 (33%), Gaps = 41/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L P+Y S LL+ K ++ + Sbjct: 713 AYFLTHFHSDHYAG---LSKDFTRPIYCSEITGSLLKKKLR----VQEQYIHQLPMDTEC 765 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P ++ + P G + +HTGD++ D + + Sbjct: 766 IVDGVKVVLLDANH-CPGATMILFQLPNGAVTLHTGDFRADPSMER---------SLLAS 815 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + A L+ + + + + + Sbjct: 816 RKVHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVCGTYCIGKEKVFLA 875 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 876 IADVLGSKV---GMSQEKYKTL-----------QCLNIPEVSSLITTDMC----NSLVHL 917 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + + + + A + Sbjct: 918 LPMMQINFKGLQNHLKKCGGKFDQILAFRPTGW--THSNNITSIADITPQTKGNIAIYGI 975 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 976 PYSEHSSYLEMKRFVQWLKPQKIIPT 1001 >gi|255281094|ref|ZP_05345649.1| VicX protein [Bryantella formatexigens DSM 14469] gi|255268542|gb|EET61747.1| VicX protein [Bryantella formatexigens DSM 14469] Length = 265 Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 17/157 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVS--FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + + +++D G+S ++ L +D PD + I ITH Sbjct: 12 GNCIFVG----TEQTSLLVDIGISARQAENGLHTIDRTLPD----------IDGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH + +P+Y + + ++ + + + + +G I Sbjct: 58 HSDHIRGIGVAARKAGMPIYGTRGTLEAVK-RCSSLGKIDESLYREIRPDEVFQIGDMEI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 +H E +A + S + D + +D I Sbjct: 117 LPFSTSHDAAEPVAYRVNSGGKSAAVVTDLGVYNDYI 153 >gi|154151692|ref|YP_001405310.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|154000244|gb|ABS56667.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 262 Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 34/218 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGV----SFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N Y + S+ ++ID G+ +F + G D PD + AI +T Sbjct: 12 GNCT---YVAGSNGS-LLIDAGLSAKETFVRMTKTGCD---PD---------RVAAILVT 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI-SFQAGDKVDVGA 133 H H DH L L L PVY + + + R S + I + Q G Sbjct: 56 HEHGDHIRGLDVLARKLSCPVYGTQGTLA---EFLSHRRTSDRPLQIQACQYDTAFSAGE 112 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 F + +H E V++ I + D + +L D +G++ Sbjct: 113 FRVLPFATSHDAAEPCGFVLQENGSKIGYCTDTGIVTSHML----DLLR----HCDGVVL 164 Query: 194 LMCDSTNAMREGTCIS--EKGIKKNIYDIMKNAKGCVL 229 + G ++ I+ N + A VL Sbjct: 165 ESNHCPEMLANGPYPESLKRRIRSNRGHLSNPAAARVL 202 >gi|304317880|ref|YP_003853025.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779382|gb|ADL69941.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 538 Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 79/533 (14%), Positives = 149/533 (27%), Gaps = 114/533 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-- 63 + LG E+ + L + ++DCG F + + + + Sbjct: 1 MKITFLGAAKEVTGSCYLVE----TESTKFLVDCG-MFQGSE------IEDEFNYQEFAF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + +THAH DH G + L+ +YA+ + L E ++I Sbjct: 50 DVDEIDFMLLTHAHIDHSGRIPLLYKRGYKKKIYATKGTVDLCEYMLQDSGHIQQIE-NE 108 Query: 123 FQAGDKVDVG---------------------------------AFSIESVRVNHSIPETM 149 ++ + G + H + + Sbjct: 109 WKNRKRKRAGKPLRMPLYTADDGKAAMQLFCGVDYDEIIEPSLDVKVRFNDAGH-MLGSS 167 Query: 150 ALVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 L I IV +GD + IL D T + L+C+ST R Sbjct: 168 ILEIWVKEGDKETKIVFSGDLGNKNIPILRDPT--------IIDEADYLVCESTYGDRLH 219 Query: 206 TCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIG----------- 251 + +K K + +I+K G V++ +F+ V R + ++ ++ Sbjct: 220 EDVGDK--AKKLMEIIKKTISRGGNVVIPSFA--VGRTQELLYEIHKLDEELYKDEIEYI 275 Query: 252 -RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP-------------------- 290 + V + S L V+ + D+ G YP Sbjct: 276 SKVPVYVDSPLATSVTGVFRKHLDYFDEEARRYVENGDYPLDFPNLHFTHSAEESKALND 335 Query: 291 -REQLIVIATGSQ---GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK 346 +E +I+I+ G + L + R I E + Sbjct: 336 LKEPVIIISASGMCEAGRIKHHLKHNLWRADSTIVFVGYQAKGTLGRRILDGEKTV---- 391 Query: 347 NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKEL 404 + + + V AE SGH L +P+ + +HGE + Sbjct: 392 -NIFGEEITVNAEIENIDSF-SGHADQKGLIDWISSFKRKPKKVFIVHGEDKAQKVFSDK 449 Query: 405 ALQEGIACVPPVRNGKMLRLFPDPIEIIDEV--VHGLFLKDGFLIGKFADLGI 455 E D I I + L + + + Sbjct: 450 IRGELNIDTVIPSKYDTYDFDADTINIAEIALPSEDEILNKIEELRDENEKVL 502 >gi|304317993|ref|YP_003853138.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779495|gb|ADL70054.1| beta-lactamase domain-containing protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 259 Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 26/227 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N A GY I++D G+S + L +D+ ++ AI ITH Sbjct: 12 GNAAYIGYKDVH----ILVDAGLSGSTIEKSLESIDV----------NPCSISAILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L ++P+YA+ +E K + G+ +G I Sbjct: 58 HNDHIKGAGVLSRRYNIPIYANEATWASMENLLGEINCDNKRFFKT---GEDFTLGDVRI 114 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + +H E + D + ++ D D + N + L+ Sbjct: 115 RPFKKSHDAVEPVGFSFFCGQNKATIATDLGYISRGVAANIMDSDIVLLESNHDVDMLIN 174 Query: 197 DS------TNAMREGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSSS 236 S + +S K + I I + G + + S + Sbjct: 175 GSYPWTLKKRILSPHGHLSNKDAAEAIKKFIKLKSIGKIYLGHLSQN 221 >gi|239635863|ref|ZP_04676886.1| metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|239598487|gb|EEQ80961.1| metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|330685291|gb|EGG96952.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU121] Length = 272 Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + I++D G++ K + I + K+L I +TH H DH L L Sbjct: 27 VENEKGSILVDVGLTGKKMEEL--------FGQIDRNIKDLNGILVTHEHIDHIKGLGVL 78 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +E K + +K + + F IES V+H + Sbjct: 79 ARKYNLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETQSIAGFDIESFNVSHDAID 135 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 136 PQFYIFHNDHKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 195 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 196 LGDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 230 >gi|302331794|gb|ADL21987.1| metallo-beta-lactamase hydrolase [Staphylococcus aureus subsp. aureus JKD6159] Length = 260 Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + F + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKK---DSRIPVDQKFIFNPYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|224477934|ref|YP_002635540.1| hypothetical protein Sca_2452 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422541|emb|CAL29355.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 263 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 13/170 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + I + ++L I +TH H DH L L Sbjct: 18 VESDKGSLLVDVGLTGKKMEEL--------FGKIDRNIEDLNGILVTHEHVDHIKGLGVL 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + F + +G F IES V+H + Sbjct: 70 ARKYKLPIYANEKTWKAIEKK---DSKIPMDQKFIFNPYETHSLGGFDIESFNVSHDAID 126 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALM 195 + + D + D + +D + + +L + Sbjct: 127 PQFYIFHNDYKKFTMITDTGYVSDSMKGMIRGSDAFMFESNHDVDMLRMC 176 >gi|121595016|ref|YP_986912.1| beta-lactamase domain-containing protein [Acidovorax sp. JS42] gi|241764370|ref|ZP_04762397.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|120607096|gb|ABM42836.1| beta-lactamase domain protein [Acidovorax sp. JS42] gi|241366263|gb|EER60820.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 452 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 57/449 (12%), Positives = 131/449 (29%), Gaps = 94/449 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L +G I++D G+ F + + K + A Sbjct: 6 LGATGTVTGSKYLLRHG----DSTILVDSGL-FQGFKQL----RLRNWEPLPVAPKTIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + +THAH DH G L L VY + L + + + + Sbjct: 57 VVLTHAHIDHSGYLPLLARQGFRGRVYCTSATHELCKILLTDSGHLQEEEAKFANRYGFS 116 Query: 122 SFQAGDKVDV-------------GAFSIESVRV---------NHSIPETMALVIRSPVGN 159 + + F+ + + + + + + + Sbjct: 117 KHKPALPLYTREDAERCLKLFSPRPFAEAFEALPGLTARLEPSGHMLGSAFVHLSDGQRS 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 ++ +GD D + G L+ +ST R+ + + + Sbjct: 177 VLFSGDIG--------RPNDPVLRPPVQVPGADYLLVESTYGNRKHEETDALEKLETVIN 228 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 G V++ F+ V R +S++ Q+ ++ G + + + Sbjct: 229 QTAARGGVVVIPAFA--VGRAQSLMYGIYQLKKQ----GR--------IHHLPVYLDSPM 274 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 + R++ + +G +A E + + + VI S+ + Sbjct: 275 AIDATQLYHAHRDEHRLSPEECEGMCHAAKIVNKVEESKALSASRGPMVIISASGMATGG 334 Query: 340 VAIGHIKNRLVEQG---------------VRVIAEDAECPVH---------------VSG 369 + H+K+ ++ ++ + +H +S Sbjct: 335 RVVHHLKSFAPDRRNTILFAGYQAGGTRGAAILHGASTVRIHGEDVPIRAEVASLDNLSA 394 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H +++ + P+ HGEP Sbjct: 395 HADADEIIAWLRGFTQTPRRTFVTHGEPE 423 >gi|253730422|ref|ZP_04864587.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725902|gb|EES94631.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 260 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|15923012|ref|NP_370546.1| hypothetical protein SAV0022 [Staphylococcus aureus subsp. aureus Mu50] gi|15925727|ref|NP_373260.1| hypothetical protein SA0021 [Staphylococcus aureus subsp. aureus N315] gi|21281751|ref|NP_644837.1| hypothetical protein MW0022 [Staphylococcus aureus subsp. aureus MW2] gi|49482275|ref|YP_039499.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49484934|ref|YP_042155.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|148266469|ref|YP_001245412.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150392502|ref|YP_001315177.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|156978353|ref|YP_001440612.1| hypothetical protein SAHV_0022 [Staphylococcus aureus subsp. aureus Mu3] gi|221141407|ref|ZP_03565900.1| hypothetical protein SauraJ_07183 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316860|ref|ZP_04840073.1| hypothetical protein SauraC_12085 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|254663956|ref|ZP_05143428.1| hypothetical protein SauraM_00110 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424218|ref|ZP_05600647.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426895|ref|ZP_05603297.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429531|ref|ZP_05605918.1| YycJ protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432178|ref|ZP_05608541.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257435139|ref|ZP_05611190.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|257793560|ref|ZP_05642539.1| beta-lactamase [Staphylococcus aureus A9781] gi|258411134|ref|ZP_05681413.1| beta-lactamase [Staphylococcus aureus A9763] gi|258420962|ref|ZP_05683896.1| metallo-beta-lactamase [Staphylococcus aureus A9719] gi|258423216|ref|ZP_05686108.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] gi|258438601|ref|ZP_05689824.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|258443943|ref|ZP_05692281.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|258446241|ref|ZP_05694401.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|258449100|ref|ZP_05697206.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6224] gi|258454422|ref|ZP_05702390.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] gi|269201712|ref|YP_003280981.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED98] gi|282894301|ref|ZP_06302531.1| ribonuclease Z [Staphylococcus aureus A8117] gi|282902653|ref|ZP_06310546.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus C160] gi|282907069|ref|ZP_06314917.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282910048|ref|ZP_06317856.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912296|ref|ZP_06320092.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282912936|ref|ZP_06320728.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M899] gi|282918090|ref|ZP_06325840.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282921312|ref|ZP_06329030.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282922564|ref|ZP_06330254.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|282927772|ref|ZP_06335386.1| ribonuclease Z [Staphylococcus aureus A10102] gi|283767812|ref|ZP_06340727.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283959506|ref|ZP_06376947.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus A017934/97] gi|293497989|ref|ZP_06665843.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|293511579|ref|ZP_06670273.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus M809] gi|293550188|ref|ZP_06672860.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M1015] gi|295406886|ref|ZP_06816690.1| ribonuclease Z [Staphylococcus aureus A8819] gi|295429319|ref|ZP_06821941.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276714|ref|ZP_06859221.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus MR1] gi|297245921|ref|ZP_06929783.1| ribonuclease Z [Staphylococcus aureus A8796] gi|13699939|dbj|BAB41238.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14245789|dbj|BAB56184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203186|dbj|BAB93887.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49240404|emb|CAG39050.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49243377|emb|CAG41794.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|147739538|gb|ABQ47836.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149944954|gb|ABR50890.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|156720488|dbj|BAF76905.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257273236|gb|EEV05338.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276526|gb|EEV07977.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257280012|gb|EEV10599.1| YycJ protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283057|gb|EEV13189.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257285735|gb|EEV15851.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|257787532|gb|EEV25872.1| beta-lactamase [Staphylococcus aureus A9781] gi|257840019|gb|EEV64484.1| beta-lactamase [Staphylococcus aureus A9763] gi|257843152|gb|EEV67567.1| metallo-beta-lactamase [Staphylococcus aureus A9719] gi|257846545|gb|EEV70567.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] gi|257848160|gb|EEV72152.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|257850827|gb|EEV74771.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|257855067|gb|EEV78010.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|257857533|gb|EEV80428.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6224] gi|257863516|gb|EEV86276.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] gi|262074002|gb|ACY09975.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED98] gi|282314785|gb|EFB45171.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|282315727|gb|EFB46111.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282318375|gb|EFB48735.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282323036|gb|EFB53355.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M899] gi|282323992|gb|EFB54308.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326114|gb|EFB56419.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329968|gb|EFB59489.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282590532|gb|EFB95610.1| ribonuclease Z [Staphylococcus aureus A10102] gi|282597112|gb|EFC02071.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus C160] gi|282763346|gb|EFC03476.1| ribonuclease Z [Staphylococcus aureus A8117] gi|283461691|gb|EFC08775.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283789098|gb|EFC27925.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus A017934/97] gi|285815749|gb|ADC36236.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus 04-02981] gi|290919235|gb|EFD96311.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M1015] gi|291096920|gb|EFE27178.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|291465537|gb|EFF08069.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus M809] gi|294968351|gb|EFG44376.1| ribonuclease Z [Staphylococcus aureus A8819] gi|295127078|gb|EFG56722.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|297177286|gb|EFH36539.1| ribonuclease Z [Staphylococcus aureus A8796] gi|298693344|gb|ADI96566.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED133] gi|315129565|gb|EFT85557.1| hypothetical protein CGSSa03_11301 [Staphylococcus aureus subsp. aureus CGS03] gi|315195248|gb|EFU25636.1| hypothetical protein CGSSa00_04272 [Staphylococcus aureus subsp. aureus CGS00] gi|329725920|gb|EGG62399.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 266 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 21 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 73 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|255009339|ref|ZP_05281465.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis 3_1_12] gi|313147094|ref|ZP_07809287.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis 3_1_12] gi|313135861|gb|EFR53221.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis 3_1_12] Length = 267 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G+ G+ + + I Sbjct: 1 MKIRFISLASGSSG----NCYYLG----TEKYGILIDAGI--------GIRTIKKTLRDI 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ L L++PVY + G+ ++ + E++ + Sbjct: 45 NVTMDSIRAVFITHDHADHIKAVGHLGEKLNIPVYTTARIHAGINKSYCMTEKLHASVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + + F IES V H + + I D Sbjct: 105 LEKE--EPMQLEDFRIESFEVPHDGTDNVGYCIEVDGKVFSFLTD 147 >gi|258624499|ref|ZP_05719443.1| metallo-beta-lactamase family protein [Vibrio mimicus VM603] gi|258583196|gb|EEW08001.1| metallo-beta-lactamase family protein [Vibrio mimicus VM603] Length = 438 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 69/446 (15%), Positives = 128/446 (28%), Gaps = 96/446 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMA 70 GG + + + S + ++IDCG+ + +D +L Sbjct: 7 GGKESVTGSC----HELRSHGQALLIDCGLFQGADERPLEIDFAV----------NHLNG 52 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC---- 120 + +THAH DH G L L + + P++ + L+ +S K Sbjct: 53 LVLTHAHIDHIGRLPWLLAAGFNQPIFCTAATAELVPLMLEDGLKLQLGMSPKQSERVLT 112 Query: 121 ------ISFQAGDKVDVGAFS-----IESVRVNHSIPETMALVIRSP-VGNIVHTGDWKL 168 + I H I + + IR P +V +GD Sbjct: 113 QVRRLLRVQDYQKWFALQPKRADSLCIRFQPAGH-ILGSAYVEIRLPNGEVVVFSGDLGP 171 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 +L D + L ++T ++ + + + +++ + Sbjct: 172 SHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GDRLRVMIERSLSDG 221 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKD 277 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 222 GAILIPAFS--VGRTQELLFDIEQLIFSHQIDANLPIILDSPMAQRVTRSYRHFKQLWGR 279 Query: 278 QLFLSDESFGLYPREQLIVIATGSQG---------------------------EPRSALA 310 + + + + + + L Sbjct: 280 EAKVRLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYLK 339 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 L E ++ LA R I E ++ I VE + S H Sbjct: 340 ALLPDERTDLILAGFQAEGTLGRKIQSGEKSVW-IDGDEVEVKAHIHTMSG-----YSAH 393 Query: 371 PYPNDLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 394 ADQADLLRFITGIAEKPKQVHLIHGE 419 >gi|147674075|ref|YP_001218520.1| hypothetical protein VC0395_A2642 [Vibrio cholerae O395] gi|146315958|gb|ABQ20497.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227012107|gb|ACP08317.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 455 Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 126/443 (28%), Gaps = 87/443 (19%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 17 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFALGHV 67 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC-- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 68 DALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERV 127 Query: 121 --------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 V + H + R +V +GD Sbjct: 128 LTEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGHILGSAYVETRRPNGEVVVFSGDLG 187 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 188 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTD 237 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKK 276 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 238 GGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWG 295 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR--- 333 + + + + + R S GE V A Sbjct: 296 REAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 355 Query: 334 -----------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPND 375 + G E +G E + +H S H D Sbjct: 356 KALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKAD 415 Query: 376 LKRMYQWI--RPQVLVAIHGEPL 396 L R I +P+ + IHGE Sbjct: 416 LLRFITGIPEKPKQVHLIHGEAP 438 >gi|237809221|ref|YP_002893661.1| beta-lactamase domain-containing protein [Tolumonas auensis DSM 9187] gi|237501482|gb|ACQ94075.1| beta-lactamase domain protein [Tolumonas auensis DSM 9187] Length = 452 Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 84/274 (30%), Gaps = 50/274 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G I+IDCG+ F +L + + E Sbjct: 2 LSLTSLGGAGTVTGSKHLITHG----NTRILIDCGL-FQGLK----NLRELNWQRLAVEP 52 Query: 66 KNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVY------------- 111 K++ A+ +THAH DH G L L ++++ + E + Sbjct: 53 KDIDAVVLTHAHLDHCGYLPRLVLDGFRGKIFSTSATRDVAELILLDSAWLQEKDADFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIE-----------SVRVNHSIPETMALVIR 154 + + + + + + +R I I Sbjct: 113 RKGFSKHKPALPLYRVRDAERTLLQFKPVPLHQETELPGNARLLLRSAGHILGAATAQID 172 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD + D + ++ +ST R Sbjct: 173 IGGKRLVFSGDLGR---FDDMVMPDPE-----PVTAADYIIIESTYGNRRHDRSDAVEAL 224 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 +I + G V++ F+ V R +S+I Sbjct: 225 GDIIERTTRRGGTVVIPAFA--VGRAQSLIYDLW 256 >gi|327277472|ref|XP_003223488.1| PREDICTED: DNA cross-link repair 1A protein-like [Anolis carolinensis] Length = 967 Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 111/327 (33%), Gaps = 40/327 (12%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 F+TH H DHYG L P+Y + L+++K RV ++ I + Sbjct: 650 KGYFLTHFHSDHYGG---LTKKFTFPIYCNKITGNLVKSKL---RVLEEYIHILPMNTEC 703 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + + + + NH P ++ P I+HTGD++ + + Sbjct: 704 I-IDGIKVVLLDANH-CPGAAMILFAFPNGTAILHTGDFRAHPSM--------ERYPFLI 753 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSII 244 I L D+T E T S++ + + + LV + S+ + + + Sbjct: 754 GRKINTLYLDTTYCSPEYTFPSQQEMIQFAANTAFEIVTLNPRTLVVCGTYSIGKEKVFL 813 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 IA +G K+ + S ++ ++ + L + L+ + + G Q Sbjct: 814 AIANVLGSKVSM---SQEKYKTLQCLESTEINSLITLDWNNTLLHLLPMMQINFKGLQN- 869 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 L++ S + + + + + Sbjct: 870 ---HLSKFSAKFDQILAFKPTGWTYS---------DQCYSLND----IQPQTRGNITIYG 913 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++KR QW++PQ ++ Sbjct: 914 IPYSEHSSFVEMKRFVQWLKPQKIIPT 940 >gi|269793165|ref|YP_003318069.1| beta-lactamase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100800|gb|ACZ19787.1| beta-lactamase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 531 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 84/554 (15%), Positives = 165/554 (29%), Gaps = 104/554 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG GE+ + L + +++DCG+ +D+ DL Sbjct: 3 LKF--LGAAGEVTGSCYLLE----TDDYRMLVDCGIHQGRDED---DLTRSSKGVFPFNP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA-----------IGLLE------- 106 ++ A+ +THAH DH G L L P+ A+ L+ Sbjct: 54 ASVDAVLLTHAHMDHSGLLPLLVRLGFKGPIMATSATVDFCGVLWRDSANLMREEAEWRT 113 Query: 107 AKRVYERVSKKIPCISFQAGD--------------KVDVGAFSIESVRVNHSIPETMALV 152 K + + P + + + H I + + Sbjct: 114 RKNARKGLPPVEPLYTLDDVERAERLLRPVSYDELMHLNSTVQVRFRDAGH-ILGSAMIE 172 Query: 153 IR---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT-CI 208 I S +V +GD + + + E ++ +ST R Sbjct: 173 IWLGPSRDVKVVFSGDLGPMKTVMEKNPS--------IIEDADFVVIESTYGDRFHKDNE 224 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 S + +++ +++G VL+ TF V R + I+ L + + SV Sbjct: 225 STREEFRSVITEALSSRGKVLIPTFV--VDRAQRILYELN-------LFQRAYPQANSVP 275 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQL--IVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 I + ++L + A PR+ + + R++ Sbjct: 276 IFFDSPMGAKATDIYRDHPEMLSQELQSFIRAGDDPFSPRNLRHVSTVDDSRSINQMSHA 335 Query: 327 TVIFSSRAIPGNEVAIG-------------------------HIKNRLVEQGVRVIAEDA 361 V+ S G + + + + + Sbjct: 336 LVMAGSGMCTGGRIVHHLKHNLWRESCHVIFVGYQARGTLGRRLVDGERVLKIAGEEINV 395 Query: 362 ECPVHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 + +H S H DL P + + HGEP A + G + P Sbjct: 396 QAKIHTINGFSAHGDKRDLLTWAGHFESGP-LFLVTHGEPKSSEALAKSLGDMGYRAMVP 454 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIG---KFADLGIAKRRQLSFVGHL--SVN 470 R ++ PD + + V+ + ++ + L + R ++S G + V Sbjct: 455 RRGEEINLRKPDVVPGVQPVIPLQRSQREEVLEALAEIGSLSVGLRDRMS-EGEIPRDVV 513 Query: 471 VLLDNHYNIFGVPE 484 L+++ + E Sbjct: 514 ALIESSRTLLKTAE 527 >gi|308049063|ref|YP_003912629.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799] gi|307631253|gb|ADN75555.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799] Length = 468 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 63/457 (13%), Positives = 132/457 (28%), Gaps = 93/457 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLM 69 G E+ + + + + +++DCG+ + D + + +++ Sbjct: 8 GAATEVTGS----RHLLNINGQRVLLDCGMHQGGELSKRLRRDT-------LPFKSRDID 56 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------EAKRVYE 112 A+ ++HAH DH GAL L P+Y + + LL V + Sbjct: 57 AVVLSHAHLDHSGALPRLMRRGYRGPIYCTGATLNLLAVLLKDACNLYLKDLERDNLVRK 116 Query: 113 RVSKKIPCISFQAGDKVDV----------------GAFSIESVRVNHSIPETMALVIRSP 156 R +K+ ++ D + V + + H I + + Sbjct: 117 RKGQKVQKPVYEMEDVLAVLEACQVLPYDLPTDILPGVRVNLLDAGH-ILGAAMVHLTLD 175 Query: 157 V------GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 ++ +GD + ++ D + +M +ST R E Sbjct: 176 DGSEPEPMRLLFSGDLGNTESPLMRDPA--------PVPEVDWVMMESTYGNRNHRSYQE 227 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR-------SIIDIAEQIGRKIVLLGSSLKR 263 + +++++A+G V++ + +V R + G +VL Sbjct: 228 T--LDELAEVLESARGGVIL-VPAFAVGRTQEVLFQLGCFYHQGRLEGWHVVLDSPMAIE 284 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRG------- 315 V + + + + G E + +Q S L ++++G Sbjct: 285 VTQIYDQWLELMDPEDLAQLSAEGSNTLEAFLPCLHLTQNTDDSIGLNRINQGLIIIAGS 344 Query: 316 --------EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 D N + + + +H Sbjct: 345 GMCNGGRMVHHLKHRVWDDRTHLLFTGFQANGTLGRQLVDGEKRVRLFGQTYAVRAHIHT 404 Query: 368 ----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHL 398 S H L I RP+VL+ E L Sbjct: 405 LGGFSAHADQAQLLNWLAAIPGRPRVLLVHGEESAQL 441 >gi|167756931|ref|ZP_02429058.1| hypothetical protein CLORAM_02480 [Clostridium ramosum DSM 1402] gi|167703106|gb|EDS17685.1| hypothetical protein CLORAM_02480 [Clostridium ramosum DSM 1402] Length = 205 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 17/172 (9%) Query: 19 MNMALYGYGSPSSRK-WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 NM GY ++ID G + G +V ++ + A+ +TH H Sbjct: 9 GNMQTNGYVVSDENHHCLIIDPGAN-------GKKVV----HYLTENELVPEAVLLTHGH 57 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAF 134 DH GA+ L+ H P+Y + +L+ + + +++ G F Sbjct: 58 FDHIGAVDYLYEHYHCPIYLHQDDLEMLDNPQLNLSVYENPFTVKAPVQSSHEEMKFGDF 117 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 ++ + + P + + + NI+ +GD D + I Sbjct: 118 DVQWLHLPGHCPGSSMIYL--KDENIIFSGDVLFKGSIGRFDFPNSSKYETI 167 >gi|134094732|ref|YP_001099807.1| putative metallo-beta-lactamase family protein [Herminiimonas arsenicoxydans] gi|133738635|emb|CAL61680.1| putative exonuclease, metallo-beta-lactamase family [Herminiimonas arsenicoxydans] Length = 453 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 66/444 (14%), Positives = 120/444 (27%), Gaps = 73/444 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG G + + L G+ + I++DCG+ F + E Sbjct: 1 MRIKFLGGTGTVTGSKYLLSAGTSN----ILVDCGL-FQGYKQL----RLRNWDKFPIEP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 L A+ +THAH DH G L L + +Y S L + + Sbjct: 52 AKLNAVVLTHAHLDHSGYLPLLVKNGFNGKIYCSEATFDLCKILLPDSGRLLEEEAGYAN 111 Query: 117 KIPCISFQA-------GDKVDVGAF----------------SIESVRVNHSIPETMALVI 153 + D + F + E H I + I Sbjct: 112 RHGFSKHSPALPLYSEADAIRALKFFSPVGFDSSFQVCAELTAEMRHAGH-ILGAAIVSI 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 RS I +GD D + + L+ +ST R + Sbjct: 171 RSDTSRITFSGDLG--------RPNDPIMMPPEFVKNTDYLVVESTYGNRLHDTSDPLLV 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA---EQIGRKIVLLGSSLKR--VVSVA 268 + N G ++ +F+ + R + ++ ++ G +L L V Sbjct: 223 LGKTINDTANRGGVTIIPSFA--LGRAQELMYYIHLLKKSGAIPAILPVYLNSPMAVDAT 280 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLI-----VIATGSQGEPR-----SALAQLSRGEMR 318 ++D S++ + +++ IA + P S +A R Sbjct: 281 QIYNKHRRDHRLTSEQCEAMCHAAKIVNSVEESIALNQKKIPMVIIAASGMATGGRVLHH 340 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHPYPN 374 + + V ++S H Sbjct: 341 LKAFGSDPRNTILFVGFQAGGTRGASMIAGADAIKIHGEYVPLRAEVKQIDNLSAHADRG 400 Query: 375 DLKRMYQ--WIRPQVLVAIHGEPL 396 ++ P+ HGEP Sbjct: 401 EIIGWLSHFAAPPKQTFITHGEPD 424 >gi|120537811|gb|AAI29477.1| Dclre1a protein [Danio rerio] Length = 431 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 106/330 (32%), Gaps = 45/330 (13%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + A F+TH H DHYG L VP+Y + L+++K + Sbjct: 99 VTAYFLTHFHSDHYGG---LKKDSAVPIYCNKVTSNLVKSKLK----VDEQYIHVLPMNT 151 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + V + + NH P + L+ P ++HTGD++ D + + Sbjct: 152 ECIVQGVKVTLLDANH-CPGAVMLLFVLPDGQTVLHTGDFQADPSM--------ERYPEL 202 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDIMKNAKGCVLVTTFSSSVSRIR 241 I L D+T E T +++ + + N + V+ T+S ++ Sbjct: 203 QGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGTYSVGKEKVF 262 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 + + + I ++ + P Q+ + Sbjct: 263 LAVSEVLSSKVCLS---KDKYNTMCCLESEDIGQRITTNWQSAQVHVLPMMQI------N 313 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 ++ L + S+ + V N+ + + + + Sbjct: 314 FKNLQTHLKKFSKKYDQLVAFKPTGWTF--------NQTV------GVDDILPQTQGNIS 359 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +LKR QW+RP+ ++ Sbjct: 360 IYGIPYSEHSSFLELKRFVQWLRPKKIIPT 389 >gi|282163884|ref|YP_003356269.1| hypothetical protein MCP_1214 [Methanocella paludicola SANAE] gi|282156198|dbj|BAI61286.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 400 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 59/414 (14%), Positives = 126/414 (30%), Gaps = 68/414 (16%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G + L + +++D G+ P+ + I I+H H Sbjct: 2 GRSAFLL-------NEKVLLDYGIKPSDP---------PEYPAGSPRPET---IVISHGH 42 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAK------RVYERVSKKIPCISF-------- 123 DH G + +L L V A+P L + Sbjct: 43 LDHCGVVPNLM-DLKPTVLATPPTKYLTKLLAQDTLEIAERGHVPPFDPNDMQMLLKRTR 101 Query: 124 --QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + I + H IP + + +++TGD K D +L Sbjct: 102 ELDYNEDYSTDDYMITLLDAGH-IPGSALTYVEFDDDTLLYTGDIKNSDTRLLKG----- 155 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVS 238 I G LM +ST ++ I K +++ + ++ G V++ F+ + Sbjct: 156 --SKIHYPGARTLMVESTYFGKDH--IDRKALEEQFIESIRYTLDIGGNVVIPCFA--IG 209 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ---------LFLSDESFGLY 289 R + ++ I ++ G + + G + + + ++ + Sbjct: 210 RTQEVLLILKEYGIRCFVDGMGTEVTDILLKNPEYVRDPGRLKSAYGSATTVKGSMRRTV 269 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 E +V+ T AL + K+ ++ + + G + N + Sbjct: 270 LDEPSVVVTTAGMLNGGPALYYIPNMYDD-----PKNKIMLTGFQVDGTNGRMALDTNTI 324 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVA 400 G + S H +LK + + + + + +HG+ A Sbjct: 325 DVDGEILPLRCKLEQYSFSAHSGDAELKAIVKHMCDQGTENVFCVHGDHTQEFA 378 >gi|262168029|ref|ZP_06035728.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC27] gi|262023562|gb|EEY42264.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC27] Length = 438 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 68/442 (15%), Positives = 126/442 (28%), Gaps = 84/442 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + + + ++IDCG+ F + V+ ++ Sbjct: 7 GGKASVTGSC----HELRADGQALLIDCGL-FQGADERPLAVEFAL----------GHVD 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC--- 120 A+ +THAH DH G L L + L P+Y++ L+ +S K Sbjct: 52 ALILTHAHIDHIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 121 -------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V + H + R +V +GD Sbjct: 112 TEVRRLLRVQDYQKWFAVQPKRADSLWVRFQPAGHILGSAYVETRRPNGEVVVFSGDLGP 171 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---K 225 +L D + L ++T ++ + + + + +++ + Sbjct: 172 SHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLTDG 221 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKD 277 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 222 GAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLWGR 279 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR---- 333 + + + + + R S GE V A Sbjct: 280 EAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYLK 339 Query: 334 ----------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPYPNDL 376 + G E +G E + +H S H DL Sbjct: 340 ALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKADL 399 Query: 377 KRMYQWI--RPQVLVAIHGEPL 396 R I +P+ + IHGE Sbjct: 400 LRFITGIPEKPKQVHLIHGEAP 421 >gi|324021704|ref|NP_001018385.3| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Danio rerio] Length = 926 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 106/330 (32%), Gaps = 45/330 (13%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + A F+TH H DHYG L VP+Y + L+++K + Sbjct: 594 VTAYFLTHFHSDHYGG---LKKDSAVPIYCNKVTSNLVKSKLK----VDEQYIHVLPMNT 646 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + V + + NH P + L+ P ++HTGD++ D + + Sbjct: 647 ECIVQGVKVTLLDANH-CPGAVMLLFVLPDGQTVLHTGDFRADPSM--------ERYPEL 697 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKN-----IYDIMKNAKGCVLVTTFSSSVSRIR 241 I L D+T E T +++ + + N + V+ T+S ++ Sbjct: 698 QGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGTYSVGKEKVF 757 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 + + + I ++ + P Q+ + Sbjct: 758 LAVSEVLSSKVCLS---KDKYNTMCCLESEDIGQRITTNWQSAQVHVLPMMQI------N 808 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 ++ L + S+ + V N+ + + + + Sbjct: 809 FKNLQTHLKKFSKKYDQLVAFKPTGWTF--------NQTV------GVDDILPQTQGNIS 854 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +LKR QW+RP+ ++ Sbjct: 855 IYGIPYSEHSSFLELKRFVQWLRPKKIIPT 884 >gi|156096985|ref|XP_001614526.1| RNA-metabolising metallo-beta-lactamase domain containing protein [Plasmodium vivax SaI-1] gi|148803400|gb|EDL44799.1| RNA-metabolising metallo-beta-lactamase domain containing protein [Plasmodium vivax] Length = 911 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 84/572 (14%), Positives = 159/572 (27%), Gaps = 140/572 (24%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDLPG------ 50 ++V LG +G + + + +M DCG +P +L Sbjct: 8 KIVIRVLGAGQTVGRSCVIVE----LENRRVMFDCGSHLGYKDERKYPNFNLLVSSEAHA 63 Query: 51 -------------------------VDLVFPDITFIMKERKNL----MAIFITHAHEDHY 81 V+ + ++ K + + I+H H DH Sbjct: 64 EEREKEKGEANIYEHHLNTEVNISIVNSSISEKEKLINNLKRINEMIDCVIISHFHMDHI 123 Query: 82 GALHDLWS--FLHVPVYASPFAIGL-------------LE---------AKRVYERVS-- 115 GAL + S L L+ K + E+ Sbjct: 124 GALPFFTEILKYRGTILMSYPTKALSPILLLDGCRVADLKWEKQNFERQIKLLNEKSDEL 183 Query: 116 --------KKIPCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVI 153 KK P + + +G SI H + I Sbjct: 184 LNYNISSLKKDPWNISEEQIYSCIGKVVGLQINETFQMGNMSITPYYAGH-VLGACIFKI 242 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEK 211 ++++TGD+ D LG I + + +ST A R SE Sbjct: 243 EVNNFSVIYTGDYNTVPDKHLGS-------TKIPSLTPEIFISESTYATYVRPTRKASEL 295 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI-----VLLGSSLKRVVS 266 + +++ + G VL+ F+ + R + + + + +K+ + G L + Sbjct: 296 DLCNLVHE-CVHKGGKVLIPVFA--IGRAQELSILLDSYWKKMKINYPIYFGCGLTENAN 352 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEK 325 + + +S + L+ + GE R L + L Sbjct: 353 KYYRIYSSWVNSSCVSTDKKNLFDFANISPFVNSYLGENRPMVLFATPGMLHTGLSLKAF 412 Query: 326 DTVIFSSR---AIPGN-------------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 S+ +PG E I N + R+I + S Sbjct: 413 KAWSGCSKNLIVLPGYCVQGTVGHKLIMGERKISFDGNTYLNVACRIIY------LSFSA 466 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 H N ++++ + + PQ ++ +HGE + + + G+ Sbjct: 467 HADSNGIQQLIRHVLPQNVLFVHGEKHGMEKLSKHIASHYLINSLCPSLGQHCEFSFSKG 526 Query: 430 EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQL 461 + V G D +RR L Sbjct: 527 NMKHVYVEGTLYADILRKLNEQ----KERRSL 554 >gi|82749799|ref|YP_415540.1| hypothetical protein SAB0022 [Staphylococcus aureus RF122] gi|82655330|emb|CAI79710.1| conserved hypothetical protein [Staphylococcus aureus RF122] Length = 266 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + +NL I +TH H DH L L Sbjct: 21 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQNLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 73 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|194016214|ref|ZP_03054828.1| metallo-beta-lactamase family protein [Bacillus pumilus ATCC 7061] gi|194011687|gb|EDW21255.1| metallo-beta-lactamase family protein [Bacillus pumilus ATCC 7061] Length = 264 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 19/218 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++D G+S + +L G I ++ ++L IF+TH H DH L Sbjct: 17 FYLETDEHAFLVDAGLSGKQMVELLG---------QIDRKPEDLDGIFVTHEHSDHIKGL 67 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +PVYA+ +E + +K F G +ES V+H Sbjct: 68 GVMARKYKLPVYANAKTWKAMETHIGKVDIEQKFH---FDMETVQSFGGLDVESFGVSHD 124 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDS 198 E M V + D + D + + + + G+L + Sbjct: 125 AAEPMFYVFHYGGRKLALMTDTGYVSDRMKGIIQSANTFVFESNHDVGMLQMGRYPWSIK 184 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ +A + + S Sbjct: 185 RRILSDVGHVSNEDAALAMTDVIGDATSRIYLAHLSQD 222 >gi|147921537|ref|YP_684647.1| mRNA 3-end processing factor [uncultured methanogenic archaeon RC-I] gi|110620043|emb|CAJ35321.1| mRNA 3-end processing factor [uncultured methanogenic archaeon RC-I] Length = 432 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 61/401 (15%), Positives = 120/401 (29%), Gaps = 66/401 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFIMKERKNLMA 70 G E+G + L I++D G+ + P D+ Sbjct: 27 GAGREVGRSAFLI-------DDKILLDYGIKPSDPPEYPQGDV-------------RPEV 66 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC---------- 120 + ++H H DH G + +L L V A+P L + Sbjct: 67 VVVSHGHLDHCGVVPNLM-DLEPKVIATPPTKQLTRLLAEDTMEIAESSHALVPFDPADM 125 Query: 121 -------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + D + +I H IP + + + + ++++TGD K D + Sbjct: 126 RQLLRLTREMEYLDAYEHDNHTITLFDAGH-IPGSSLVYVENGKQSLLYTGDIKNTDTRL 184 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLVT 231 L I ALM +ST ++ + +K I I G V++ Sbjct: 185 L-------RGSKIHYPEADALMIESTYFGKDHPDRQKLE-EKFIESIRYTLDIGGNVVIP 236 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ---------LFLS 282 +F+ + R + I+ I ++ + G + + ++ + Sbjct: 237 SFA--IGRTQEILLILKEHRIPSYVDGMGREVTDIFLKEPEYLRDPGRLRSAYGYSTTVK 294 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 E +V+ T L L + + K+ VI + + Sbjct: 295 GSMRKSLMDEPCVVVTTAGMLNGGPVLTYL-----KKIYDNPKNKVILTGYQVENTNGRT 349 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 + G V S H ++LK + + + Sbjct: 350 ALNTGTMDLDGEIVKLRCQLEQYSFSAHSGESELKAIVKHM 390 >gi|301058011|ref|ZP_07199066.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300447837|gb|EFK11547.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 432 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 64/395 (16%), Positives = 131/395 (33%), Gaps = 57/395 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + LGG + + L + I++DCG++ G D + P + +K Sbjct: 1 MKIVHLGGEKTVTGSCHLLQVNGLN----ILVDCGLA------QGRDHLLPMDCWPVKPA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS-- 122 + +F+THAH DH G + +L + + LLE + + Sbjct: 51 D-VDFLFLTHAHIDHVGRVPELVQKGFRGEILTTHATKALLEPMLKDAAGFSHLTELESV 109 Query: 123 ------------FQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVG-NIVHTGDWKL 168 F+ G D+ R H I + + + +V +GD Sbjct: 110 GLLTVIDRLSWGFEYGQSFDLDRGVRFTLGRAGH-ILGSCWIQLDLSGEGRVVFSGDLGA 168 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIMKNAKG 226 + +L D EG L+ ++T R ++ + + + + + G Sbjct: 169 EHTPLLCDP--------DVPEGCDVLVMEATYGDRVHGDRKDRKMRLGQVLQKALADG-G 219 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 VL+ F+ + R + ++ ++ + G RV + + + Sbjct: 220 KVLIPAFA--LGRTQELLYEMDR------VFGKGDFRVPVFLDS--PLGLEITKVYSSLS 269 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRG-EMRNVKLAEKDTVIFS-SRAIPGNEVAIGH 344 + +E ++ G L + R + +++ + VI + S G G Sbjct: 270 QYWDQEARGHLSRGDHPIDFDGLYAVRRHSDHMDLQRTDGPMVILAGSGMCTG-----GR 324 Query: 345 IKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 I N + E + + V G P + L Sbjct: 325 IVNHIREGIEKPENDMLFVGYQVPGTPGRDILTYC 359 >gi|56477796|ref|YP_159385.1| cAMP phosphodiesterase [Aromatoleum aromaticum EbN1] gi|56313839|emb|CAI08484.1| cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily [Aromatoleum aromaticum EbN1] Length = 281 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 36/184 (19%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L LG G IG G + + I++D G + +L Sbjct: 25 QPMKLRI--LGCSGGIGG--RASGTTAFLADDDILVDAGTGVGELEL------------- 67 Query: 62 MKERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVS 115 E + +F+THAH DH ++ L + VYA+ I +L ++ Sbjct: 68 -DELLRIDHVFVTHAHLDHIVSIPLLVDSVGELRDTPLTVYATAETIRMLRLHVFNWQIW 126 Query: 116 KKIPCISFQAGDKVDVGAF-----------SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I + + + HS+P T+A + S G +V+TG Sbjct: 127 PDFTTIPDCHRSYLRFHPVEPGHPIRLGARMVTPLPARHSVP-TVAYCLDSGEGKLVYTG 185 Query: 165 DWKL 168 D + Sbjct: 186 DTEY 189 >gi|169830171|ref|YP_001700329.1| YycJ [Lysinibacillus sphaericus C3-41] gi|168994659|gb|ACA42199.1| YycJ [Lysinibacillus sphaericus C3-41] Length = 262 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 17/218 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G+S K + T I + K L IF+TH H DH + Sbjct: 14 SIYVENDDYAFIVDAGLSGKKMEQL--------FTKIDRNVKQLSGIFVTHEHSDHIKGI 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L VP+YA+ ++ F G+ ++ES V+H Sbjct: 66 GVLARKYSVPIYANAKTWQAIDGLIGE---VPVEQRFEFDMDTVKHFGSLAVESFAVSHD 122 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDS 198 + M +V D + D + D + + +L + Sbjct: 123 AADPMFYTFHEDNRKLVIITDTGYVSDRMKGIIRGADSFVFESNHDVNMLQMGRYPWSIK 182 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +++ + + ++ S Sbjct: 183 RRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKD 220 >gi|326391500|ref|ZP_08213034.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] gi|325992476|gb|EGD50934.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] Length = 542 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 65/494 (13%), Positives = 128/494 (25%), Gaps = 93/494 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + + ++DCG+ + V+ FI Sbjct: 1 MKISFLGAAKEVTGSCYLVE----TEKTKFLVDCGMFQGGE----VEDELNYQEFIFDVG 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + +THAH DH G + L+ +YA+ + L +++ Sbjct: 53 D-IDFVLLTHAHIDHSGRIPLLYKRGYRKRIYATKATVDLCRYMLPDSGHIQEMESEWKN 111 Query: 125 AGDKVDVGA--------------------------------FSIESVRVNHSIPETMALV 152 K + H + + + Sbjct: 112 RKRKRADKPLREPLYTADEAKDSLSIFYGIDYGEIIEPAQDVKVRFNDAGH-MLGSSIIE 170 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + IV +GD +L +VT + ++C+ST R I Sbjct: 171 VWVNEKGKETKIVFSGDLGNKKIPLLKEVT--------PIKSADYVLCESTYGNRLHEDI 222 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-----------GRKIVLL 257 ++ KK + I+K K V S +V R + ++ + V + Sbjct: 223 GDR-AKKLMEIIIKTVKRGGNVIIPSFAVGRTQELLYELHKNRELYKDEIEFLNNVPVYV 281 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE---------------------QLIV 296 S L ++ D G P + +I+ Sbjct: 282 DSPLATSITDVFTKHPEYLDSEAQEYIKRGDLPLDFPNLHFTHSVEESKALNEIKTPVII 341 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I+ E L + + + + KN + Sbjct: 342 ISASGMCEAGRIKHHL---KHNLWRPECTVLFVGYQAKGTLGRKLLEGEKNVKIFGEDIS 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + + E SGH + +P+ + +HGE + + Sbjct: 399 VKAEIEYIESFSGHADQKGILDWLSQFTDKPRKIFIVHGEDEAQEELADKIENQLGIETL 458 Query: 415 PVRNGKMLRLFPDP 428 D Sbjct: 459 IPSRYDTYNFEEDK 472 >gi|326790902|ref|YP_004308723.1| beta-lactamase [Clostridium lentocellum DSM 5427] gi|326541666|gb|ADZ83525.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427] Length = 266 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 15/159 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + +ID G+S V + + +++ I ITH H Sbjct: 14 GNCTYLEAG----EQRFLIDVGIS--------GKKVVAALDQLEVAPESINGILITHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIG-LLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L ++P+YA+ A LL K + V K+ + + VG I Sbjct: 62 DHIKGVGILSRKYNIPIYATSLAWERLLGEKMI--GVVKEEHQKILEKEVYLQVGELKIL 119 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + H + + + I D DD I Sbjct: 120 PYPIYHDAVDPVGYIFEYKDKKITVATDIGTIDDKIAAR 158 >gi|115279755|gb|ABI85371.1| hypothetical protein [Vibrio cholerae] Length = 460 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 130/444 (29%), Gaps = 93/444 (20%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERK 66 NM + +G + + ++IDCG+ F + V+ Sbjct: 22 NMEVVHHGGKASVTGSCHELRADGQALLIDCGL-FQGADERPLEVEFAL----------G 70 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------------- 111 ++ A+ +THAH DH G L L + P+Y + L+ Sbjct: 71 HVHALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSE 130 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTG 164 R+ + + A + + H I + + IR P +V +G Sbjct: 131 RVLTEVRRLLRVQDYQKWFAVQPKCADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSG 189 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 D +L D + L ++T ++ + + + + +++ + Sbjct: 190 DLGPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERS 239 Query: 225 ---KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGI 273 G +L+ FS V R + ++ EQ I+L +RV Sbjct: 240 LTDGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQ 297 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 + + + + + + R S GE V A Sbjct: 298 LWGREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIM 357 Query: 334 --------------AIPGN--EVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHPY 372 + G E +G E + +H S H Sbjct: 358 DYLKALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHAD 417 Query: 373 PNDLKRMYQWI--RPQVLVAIHGE 394 DL R I P+++ IHGE Sbjct: 418 KADLLRFITGIPEEPKLVHLIHGE 441 >gi|257439905|ref|ZP_05615660.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] gi|257197633|gb|EEU95917.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] Length = 535 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 70/501 (13%), Positives = 140/501 (27%), Gaps = 100/501 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L +IDCG+ KD V+ + F + Sbjct: 1 MKLTFLGANHEVTGSCTLLEAAGQR----YLIDCGMEQGKD-------VYENQPFPVAPG 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + + +THAH DH G L L +YA+ L Sbjct: 50 E-IDGVLVTHAHIDHTGQLPLLVRNGFRGRIYATKPTTQLCSIMLRDSAHIQEFEAEWKN 108 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGAFS------------IESVRVNHSIPETMALV 152 +AKR + + + I + V H + + ++ Sbjct: 109 RKAKRAGAEPVEPMYTVQDAEAAMQLFRGMEYNTKIELAPGLVIRFIDVGH-LLGSSSIE 167 Query: 153 IRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I +V +GD I+ D T + +ST R Sbjct: 168 IWVTESGTTTKLVFSGDIGNQHQPIIKDPTTI--------RDADYVFMESTYGDRSHGPR 219 Query: 209 SEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + + + I + G V++ +F+ V R + ++ +I ++ ++ G Sbjct: 220 PD-YVGELSRILQRTFDRGGNVVIPSFA--VGRTQELLYFIREIKKEGLVTG---HGNFP 273 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--------AQLSRGE-- 316 V ID + + D + + ++A G L +++ + Sbjct: 274 VYIDSPLAIEATRIFKDTDPDCFDEDTRALLAQGIDPIQFPGLQVSVTSDESRMINADRV 333 Query: 317 ---------------------MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + + I N + Sbjct: 334 PKVIISASGMCEAGRIRHHLKHNLWRPECTILFVGYQAVGTLGRTLIDGAVNVKLFGETI 393 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + + +SGH L +P+ + IHGE + ++G Sbjct: 394 DVQAEICQLTGLSGHADREGLLAWVNAFSPKPKRVFVIHGEDEVENIFAQTLTEQGFTA- 452 Query: 414 PPVRNGKMLRLFPDPIEIIDE 434 NG+ + + + E Sbjct: 453 CAPYNGEQWAIGAEGAVCLQE 473 >gi|261420879|ref|YP_003254561.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|297531664|ref|YP_003672939.1| beta-lactamase [Geobacillus sp. C56-T3] gi|319768550|ref|YP_004134051.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261377336|gb|ACX80079.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|297254916|gb|ADI28362.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] gi|317113416|gb|ADU95908.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 264 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + R+ +++D G+S + + I + K L A+ +TH H DH L Sbjct: 17 FYIETDRQRLLVDAGLSGKQLEEL--------FAEIGRHPKQLDALLVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +PVYA+ A F G G +ES V+H Sbjct: 69 VLARKYRLPVYANEKTW---RAMEQAVGDIPPEQKFVFPLGAVRTFGDVDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + + + D + + G+L + Sbjct: 126 AEPMFYVFHYEGKKLALLTDTGYVSERIKKTIENADVFVFESNHDVGMLRMGRYPWSVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + IS + + D++ + + + S Sbjct: 186 RILSDVGHISNEEAGLALADVIGDRTKQIYLAHLSQD 222 >gi|313107581|ref|ZP_07793766.1| hypothetical protein PA39016_001030030 [Pseudomonas aeruginosa 39016] gi|310880268|gb|EFQ38862.1| hypothetical protein PA39016_001030030 [Pseudomonas aeruginosa 39016] Length = 453 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 64/439 (14%), Positives = 125/439 (28%), Gaps = 73/439 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L +G + I++DCG+ F + + K + A Sbjct: 6 LGATGTVTGSKYLLRHGDAT----ILVDCGL-FQGFKQL----RLRNWEPLPVAPKTVDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + +THAH DH G L L VY + L + + + + Sbjct: 57 VVLTHAHIDHSGYLPLLARQGFRGRVYCTSATHELCKILLTDSGHLQEEEAKFANRHGFS 116 Query: 122 SFQA-----------------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 Q D + + H + + + + Sbjct: 117 KHQPALPLYTREDAERCLKLFAPRPFSQDFEALPGLTARLTPSGH-MLGSAFVHLNDGRR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 +++ +GD D + G L+ +ST R+ + + Sbjct: 176 SVLFSGDIG--------RPNDPVLRPPVQVPGADYLLVESTYGNRKHEASDALAQLETVI 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSI---IDIAEQIGRKIVLLGSSLKR-VVSVAIDVGII 274 + G V++ F+ V R +S+ I ++ GR L L + A + Sbjct: 228 NKTAARGGVVVIPAFA--VGRAQSLMYGIYQLKKQGRIHQHLPVYLDSPMAIDATRLYHA 285 Query: 275 KKDQLFLSDESFGLY--------PREQLIVIATGSQGEPRSALAQLSRGE---MRNVKLA 323 +D+ LS E E+ ++ G + + ++ G A Sbjct: 286 HRDEHRLSPEECEGMCHAAKIVNKVEESKALSAGRGPMVIISASGMATGGRVVHHLKSFA 345 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHPYPNDLKRM 379 I + + V ++S H +++ Sbjct: 346 PDHRNTILFAGYQAGGTRGAAIVHGASTVRIHGQDVPIRAEVASLDNLSAHADADEILAW 405 Query: 380 YQWI--RPQVLVAIHGEPL 396 + P+ HGEP Sbjct: 406 MRGFTQTPRRTFVTHGEPE 424 >gi|320141440|gb|EFW33283.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144422|gb|EFW36187.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 260 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 15 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 67 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 218 >gi|126651963|ref|ZP_01724155.1| YycJ [Bacillus sp. B14905] gi|126591232|gb|EAZ85341.1| YycJ [Bacillus sp. B14905] Length = 262 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 17/218 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G+S K + T I + K L IF+TH H DH + Sbjct: 14 SIYVENDDYAFIVDAGLSGKKMEQL--------FTKIDRNMKKLSGIFVTHEHSDHIKGI 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +VP+YA+ +A F G+ ++ES V+H Sbjct: 66 GVLARKYNVPIYANAKTW---QAMDGLVGDIPVEQRFEFDMDTVKHFGSLAVESFAVSHD 122 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDS 198 + M +V D + D + D + + +L + Sbjct: 123 AADPMFYTFHEGSRKLVIITDTGYVSDRMKGIIRGADSFVFESNHDVNMLQMGRYPWSIK 182 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +++ + + ++ S Sbjct: 183 RRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKD 220 >gi|323474067|gb|ADX84673.1| beta-lactamase domain-containing protein [Sulfolobus islandicus REY15A] Length = 423 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 67/409 (16%), Positives = 140/409 (34%), Gaps = 48/409 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP----------------KDDLPGVDLVFP 56 G EIG N + + ++ D G+ F + G+ + P Sbjct: 15 GFNEIGGNFIIIE----NKDNTLVFDQGIRFSRFKKYYNANIQPSSAKELRRLGI--IPP 68 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIG-LLEAKRVYERV 114 + + I+I+H H DH G LH L + +Y +E + + Sbjct: 69 SDEY---NK-----IYISHLHLDHLGVLHLL--NVGTMLYVPDKDTFNQFIEPYKESDNW 118 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD----- 169 + I + + ++V HS + + I++TGD +L Sbjct: 119 TTYISPPLGVNVIDIRDNQDGVLPLQVEHSAYPAYSFYYNNGDVKILYTGDLRLSSPLKV 178 Query: 170 -DDAILGDVTDKDSLCAIGNEGIL--ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 D + + +K L G+ L+ + TN + + + +I + Sbjct: 179 ADQELHNRIHEKTLLEEYEERGLDTDVLIIEGTNFSSAVSPFQPHYFNEQVNNIFEIHSN 238 Query: 227 CVLVTTFSS-SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 ++ + + + ++ + ++ GR V G L ++ S I + D++ Sbjct: 239 SLITVSIDPIDLEELAYLLLVTKEKGRIPVFSGRRLIKMASFWITKFNLIDKAYQFDDKN 298 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 ++ +I + + L R ++ + VI S E Sbjct: 299 MEFETVDEEEIIRSPQDYVIFTVKGNLIDFGRRLSEITKGSVVISLST-----ESKAESG 353 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 ++ VE + +SGH YP +L+ + +I+P+ ++ IH E Sbjct: 354 EDENVEDNWYKALGFITYRLRISGHYYPYELRTILDYIKPKKVIPIHTE 402 >gi|297581730|ref|ZP_06943652.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534137|gb|EFH72976.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 446 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 131/445 (29%), Gaps = 95/445 (21%) Query: 20 NMALYGYGSPS-----------SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 NM + +G + + ++IDCG+ D+ P + ++ Sbjct: 8 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLA---------VEFALGHV 58 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------------- 111 A+ +THAH DH G L L + P+Y + L+ Sbjct: 59 HALILTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSERV 118 Query: 112 ----ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 R+ + + A + + H I + + IR P +V +GD Sbjct: 119 LTEVRRLLRVQDYQKWFAVQPKCADSLWVRFQPAGH-ILGSAYVEIRRPNGEVVVFSGDL 177 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 178 GPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSLT 227 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIK 275 G +L+ FS V R + ++ EQ I+L +RV + Sbjct: 228 DGGAILIPAFS--VGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQLW 285 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT-------- 327 + + + + + R S GE V A Sbjct: 286 GREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDY 345 Query: 328 -----------VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE-DAECPVH----VSGHP 371 +I + G +G E + +H S H Sbjct: 346 LKALLPDKRTDLILACFQAEG---TLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHA 402 Query: 372 YPNDLKRMYQWI--RPQVLVAIHGE 394 DL R I +P+ + IHGE Sbjct: 403 DKADLLRFITGIPEKPKQVHLIHGE 427 >gi|299541800|ref|ZP_07052123.1| YycJ [Lysinibacillus fusiformis ZC1] gi|298725538|gb|EFI66179.1| YycJ [Lysinibacillus fusiformis ZC1] Length = 262 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 71/218 (32%), Gaps = 17/218 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G+S K + T I + K L IF+TH H DH + Sbjct: 14 SIYVENDDHAFIVDAGLSGKKMEQL--------FTKIDRNMKQLSGIFVTHEHSDHIKGI 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L VP+YA+ ++ F+ G+ ++ES V+H Sbjct: 66 GVLARKYSVPIYANAKTWQAMDGLI---GDIPVEQRFEFEMDTVKHFGSLAVESFAVSHD 122 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDS 198 + M +V D + D + D + + +L + Sbjct: 123 AADPMFYTFHENDRKLVIITDTGYVSDRMKGIIRGADSFVFESNHDVNMLQMGRYPWSIK 182 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +++ + + ++ S Sbjct: 183 RRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKD 220 >gi|256828208|ref|YP_003156936.1| beta-lactamase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577384|gb|ACU88520.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 547 Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 79/532 (14%), Positives = 146/532 (27%), Gaps = 94/532 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-- 63 + LG + + + + IDCG+ D+ G + + Sbjct: 1 MKITFLGAARTVTGSCYVLE----CEQTRFAIDCGMHQGNRDIDGRN-------WDENGM 49 Query: 64 -ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++L I +THAH DH G L L S PVY + LL + + Sbjct: 50 YRPESLDFILLTHAHIDHSGLLPRLVSQGFKGPVYTTAPTKDLLGIML-EDSARIQETEA 108 Query: 122 SFQAGDKVDVGAFSIESVRVNHSI-----------------PETMALVIRSPVGNIVHTG 164 +++ K VGA +E + P+ VI + G+I+ + Sbjct: 109 QWRSTKKQRVGAPPVEPLYTVEDAQKALTQLKTQEYNQVFEPKPGVRVIFNNAGHILGSA 168 Query: 165 DWKL-----DDDAILGDVTDKDSLCAIGNEGI------LALMCDSTNAMREGTCISEKGI 213 +L D++ L D + L +ST R ++ Sbjct: 169 FIELWVKEGDEETKLVFSGDLGRPNQLLVPNPQTVETADFLFLESTYGSRNHKNETQSR- 227 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRS--------------------------IIDIA 247 ++ I + K V + +V R + I Sbjct: 228 QELAEAIAYSYKRGEKVIIPAFAVERTQELLYTLHLLLQEGLLPADMPVYLDSPLAIKAT 287 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 E R K +V + + + L+ + Q I G + Sbjct: 288 EIFRRHWDYYDQQTKELVKNGQNPLDLPNLRFTLTPDESRAINVSQESAIVIAGSG--MA 345 Query: 308 ALAQLSRG-EMRNVKLAEK-DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 ++ K V F + PG I + + + V Sbjct: 346 NAGRIKHHLRHNIWKTGASIVFVGFQAEGTPG-----RRIVDGAKSIRILGEELSVKAKV 400 Query: 366 HV----SGHPYPNDLKRMYQWIR-PQV-LVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 SGH + +R P++ + IHGE +L ++ V Sbjct: 401 FTIGGFSGHAGQTQILDWLSHLRNPEMQVYLIHGEHSGQKVLADLIREKFKLTVHIPDYL 460 Query: 420 KMLRL-FPDPIEIIDEVVHGLFLKDGFLIGKFADLGI---AKR----RQLSF 463 L E+ D + + + +R +++ Sbjct: 461 DECLLEKGGRFELTARPTLAAPRIDWDYLLEETSGKLVQVRERVDYLQRMGQ 512 >gi|255690180|ref|ZP_05413855.1| metallo-beta-lactamase family protein [Bacteroides finegoldii DSM 17565] gi|260624292|gb|EEX47163.1| metallo-beta-lactamase family protein [Bacteroides finegoldii DSM 17565] Length = 267 Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + V D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKVLKDYNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ +L +++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGNLGEKMNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + + F IES V H + + I D Sbjct: 105 LEKQ--EPMMLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|300087278|ref|YP_003757800.1| RNA-metabolising metallo-beta-lactamase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527011|gb|ADJ25479.1| RNA-metabolising metallo-beta-lactamase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 465 Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 73/465 (15%), Positives = 140/465 (30%), Gaps = 107/465 (23%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----SFPKDDLPGVDLVFPDITF 60 +L F LG G N+ Y ++ +++DCG+ F + + Sbjct: 3 KLTF--LGAAG----NVTGSRYLFEDTKTQLLVDCGLYQERDFQERNWH--------PAP 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYER 113 + + A+F+THAH DH G L L + PVYA+ + + E A+ E Sbjct: 49 LE--PSAIEAVFLTHAHIDHCGLLPKLVRDGFNGPVYATDATLEMAEVMLLDSARIQEED 106 Query: 114 VSKKIPCISF------------------------------QAGDKVDVGAFSIESVRVNH 143 K + + + + + H Sbjct: 107 ADYKKRRHTREGRRGKTPHPEEPLYTVEDAMACLPLFRPVERNKPLKLNGITATLFDAGH 166 Query: 144 SIPETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + M + +I +GD +L + D G L+ +ST Sbjct: 167 VMGSAMVFLEFESGGRKRSICFSGDIGR-PGRLLQNAPD-------SPTGPDYLVVESTY 218 Query: 201 AMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGR 252 RE E + + I D ++ G V++ F+ + R + ++ + I R Sbjct: 219 GDREHPPAEEVKQKLIDTIRDTVRRG-GNVVIPAFA--LERTQELLFYLKGMFHSGDIPR 275 Query: 253 KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA---- 308 V + S + ++ + + L I + + + Sbjct: 276 LPVFVDSPMATKLTEVFSRHPELWGGDIEDYKKGSPFAFPGLTFIGSAADSRAIAKKKGT 335 Query: 309 --------LAQLSRGEMRNVK--LAEKDTVIFSSRAIPG-------NEVAIGHIKNRLVE 351 +A R + V T++F G N V+ I + + Sbjct: 336 SIIIAGSGMATGGRIKHHLVNNISRSDATILFVGYQARGTLGRAIVNGVSPVRILGQEYD 395 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 +V+ +S H ++L P+ + HGE Sbjct: 396 VKAKVVQLQG-----LSAHAGRSELLDWASAFSRPPRHVFVTHGE 435 >gi|94310210|ref|YP_583420.1| beta-lactamase-like protein [Cupriavidus metallidurans CH34] gi|93354062|gb|ABF08151.1| putative RNA Modifying Enzyme [Cupriavidus metallidurans CH34] Length = 469 Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 81/488 (16%), Positives = 136/488 (27%), Gaps = 93/488 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG E+ + L ++ ++DCG+ G + Sbjct: 1 MKLSF--LGAAREVTGSCFLVE----AANVRFLVDCGMV-----QGGRVAAARNYEPFAF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------------- 106 + ++ + +THAH DH G L L P+YA+P + LL Sbjct: 50 DPASIDFVLLTHAHIDHSGLLPKLTRAGFKGPIYATPATVDLLGVMLPDSAHIQESDAKR 109 Query: 107 -AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIESVRVNHSIPETMALV 152 AKR E+ + + H I + + Sbjct: 110 VAKRFKEKTVPPPLYTLQDTHECLQQVRGIEYDREFAPRVGVRARFRDAGH-ILGSAIVE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--T 206 + IV +GD IL D T E L+ +ST R Sbjct: 169 VWITEYGYPTKIVFSGDLGQPGRPILRDPT--------PIEDADILVIESTYGDRRHKDF 220 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +E + + + G V+V F+ V R + ++ + + G + +V Sbjct: 221 SATEADMIGIVEKTLFERGGNVIVPAFA--VGRTQEVLYHLHR----LTCEGRLQRPMVF 274 Query: 267 ----VAIDVGIIKKDQLFLSDESFGLY-----PREQLIVIATGSQGEPRSALAQLSRG-- 315 +A + I ++ L L DE E L + + E AL ++ G Sbjct: 275 VDSPMATEATRITREHLELFDEQAKRLAGWHARGENLPYLDFTASAEESMALNRIRSGAI 334 Query: 316 -------------EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + + + Sbjct: 335 IISASGMCDAGRIRHHLRHNLPRRECSILFPGFQAQGTLGRRLIEGAERVRIFGEDIPVR 394 Query: 363 CPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +H +S H L + P +HGE A EL Q+ V Sbjct: 395 AAIHSVDGLSAHADQKALLDWARAFIQAPAQTFVVHGESSAAQAFAELLQQQLGWQVTVP 454 Query: 417 RNGKMLRL 424 G LR Sbjct: 455 EYGHALRW 462 >gi|57651131|ref|YP_184934.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus COL] gi|87160913|ref|YP_492744.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193845|ref|YP_498630.1| hypothetical protein SAOUHSC_00024 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220233|ref|YP_001331056.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161508288|ref|YP_001573947.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451345|ref|ZP_05699376.1| metallo-beta-lactamase YycJ [Staphylococcus aureus A5948] gi|262049452|ref|ZP_06022324.1| hypothetical protein SAD30_1379 [Staphylococcus aureus D30] gi|262051889|ref|ZP_06024104.1| hypothetical protein SA930_0843 [Staphylococcus aureus 930918-3] gi|282920741|ref|ZP_06328460.1| ribonuclease Z [Staphylococcus aureus A9765] gi|284023059|ref|ZP_06377457.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus 132] gi|294849850|ref|ZP_06790590.1| ribonuclease Z [Staphylococcus aureus A9754] gi|57285317|gb|AAW37411.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus COL] gi|87126887|gb|ABD21401.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201403|gb|ABD29213.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373033|dbj|BAF66293.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160367097|gb|ABX28068.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860875|gb|EEV83692.1| metallo-beta-lactamase YycJ [Staphylococcus aureus A5948] gi|259160216|gb|EEW45245.1| hypothetical protein SA930_0843 [Staphylococcus aureus 930918-3] gi|259162449|gb|EEW47019.1| hypothetical protein SAD30_1379 [Staphylococcus aureus D30] gi|282594149|gb|EFB99137.1| ribonuclease Z [Staphylococcus aureus A9765] gi|294823398|gb|EFG39827.1| ribonuclease Z [Staphylococcus aureus A9754] gi|315197940|gb|EFU28273.1| beta-lactamase [Staphylococcus aureus subsp. aureus CGS01] gi|329731618|gb|EGG67978.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329732650|gb|EGG69000.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 266 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 21 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 73 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 130 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 189 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 190 LGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 224 >gi|6689210|emb|CAB65404.1| YycJ protein [Staphylococcus aureus] Length = 269 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + +++D G++ K + + I + ++L I +TH H DH L L Sbjct: 24 VENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVL 75 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E K + +K + + F +ES V+H + Sbjct: 76 ARKYQLPIYANEKTWQAIEKKDSRIPMDQKFIFN---PYETKSIAGFDVESFNVSHDAID 132 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 133 PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRI 192 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 193 LGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 227 >gi|124515744|gb|EAY57253.1| putative metallo-beta-lactamase family protein [Leptospirillum rubarum] gi|206602248|gb|EDZ38730.1| Putative metallo-beta-lactamase family protein [Leptospirillum sp. Group II '5-way CG'] Length = 479 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 85/486 (17%), Positives = 152/486 (31%), Gaps = 90/486 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + L I+IDCG+ +D+L +L ++ A+ Sbjct: 7 GAASCVTGSCHLL----DVDGFRILIDCGLFQGEDELFSSNLKPFGFE-----PSSISAV 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPCISFQ 124 +THAH DH G L L PVYA+ L E A ER +K Sbjct: 58 ILTHAHLDHCGRLPTLVRQGFRGPVYATSPTRYLTEIVLWDAAHLQEERFQEKKGKQKSP 117 Query: 125 AGDKVDVGAFSI----------------------------ESVRVNHSIPETMALVIRS- 155 + I H I + ++ I Sbjct: 118 PRSSSRYTPYRIADVIDTMGHFGPSAEYEVPVNLAPGIDATFYNAGH-ILGSASVQITVS 176 Query: 156 ---PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISE 210 I+ +GD A+L + E ++ ++T R S+ Sbjct: 177 RPGKKTRILFSGDLGPGHPALLSPAS--------PPEDSDYVIMETTYGDRLHRSFEESK 228 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR 263 + + + + G VL+ TF+ + R + ++ + GR+ L S + Sbjct: 229 EELLGVLTETYGRG-GKVLIPTFA--LERAQDLLFFFREWKSEGRLPGRQSYFLDSPMAI 285 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPR------------EQLIVIATGSQGEPRSALAQ 311 V+ + +++ P E + TG +G + + Sbjct: 286 NVTHIYERFPDLLADRLVAEFQKKKDPFLFPELKFTRTVDESRTIRDTGPRGVILAG-SG 344 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGN--EVAIGH-IKNRLVEQGVRVIAEDAECPVH-- 366 + G LA++ SS G E +G I ++ + +D +H Sbjct: 345 MVSGGRILYHLAQEMENTRSSLVFVGYQAEGTLGRAILEGKKSVRIQGVMKDVRLSLHSI 404 Query: 367 --VSGHPYPNDLKRMYQWIR-PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 S H DL + ++ P + IHGE L A++E + G + + Sbjct: 405 NGFSAHADQADLLKWCGSMKIPDRVFLIHGEHRSLSAYREKLSEVGWKHAHVPVLHETVE 464 Query: 424 LFPDPI 429 L P+ Sbjct: 465 LMEKPV 470 >gi|169350548|ref|ZP_02867486.1| hypothetical protein CLOSPI_01316 [Clostridium spiroforme DSM 1552] gi|169292868|gb|EDS75001.1| hypothetical protein CLOSPI_01316 [Clostridium spiroforme DSM 1552] Length = 202 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 19/166 (11%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++D P D+ V I F+ L AI +TH H D Sbjct: 14 NCYIVS---DDDHHCFIVD-----PGDNGKKV------IKFLNDNELILDAILLTHGHFD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H GA+ ++ H P+Y I LL +A V + + +K+ +G F I Sbjct: 60 HIGAVDYIYEHCHCPIYIHQEDIALLHDAKANLSIFEVPFVVNAPVIASNEKMKIGNFEI 119 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + P + + + P +++ +GD + D + Sbjct: 120 NWLHLPGHCPGSSMIYL--PKESVIFSGDVLFNGSIGRFDFPNSSK 163 >gi|253681233|ref|ZP_04862031.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] gi|253562471|gb|EES91922.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] Length = 262 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 11/141 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S I+ID G+ PG + + I K + IF+TH H DH + L Sbjct: 17 VSSGNSSILIDAGL-------PG-KHIEKALQSINKNPNEIDGIFVTHEHIDHIKGVGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ ++ K+ + + I + ++H + Sbjct: 69 SRRYDIPIYANELTW---KSMFKNIGKIKEENIKIIYKKQGITIKDMDIFNYSISHDAID 125 Query: 148 TMALVIRSPVGNIVHTGDWKL 168 + I S + D Sbjct: 126 PVGYSIYSGEKKVCIATDLGY 146 >gi|330825292|ref|YP_004388595.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans K601] gi|329310664|gb|AEB85079.1| beta-lactamase domain protein [Alicycliphilus denitrificans K601] Length = 452 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 58/439 (13%), Positives = 129/439 (29%), Gaps = 74/439 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + L +G + I++D G+ F + + K + A Sbjct: 6 LGATGTVTGSKYLLRHGDAT----ILVDSGL-FQGFKQL----RLRNWEPLPVAPKTIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + +THAH DH G L L VY + L + + + + Sbjct: 57 VVLTHAHIDHSGYLPLLARQGFRGRVYCTSATHELCKILLTDSGHLQEEEAKFANRYGFS 116 Query: 122 SFQAGDKVDV-------------GAFSIESVRV---------NHSIPETMALVIRSPVGN 159 + + F+ + + + + + + + Sbjct: 117 KHKPALPLYTREDAERCLKLFSPRPFAEAFEALPGLTARLEPSGHMLGSAFVHLSDGQRS 176 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 ++ +GD D + G L+ +ST R+ + + + Sbjct: 177 VLFSGDIG--------RPNDPVLRPPVQVPGADYLLVESTYGNRKHEETGALEKLETVIN 228 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-----KIVLLGSSLKRVVSVAIDVGII 274 G V++ F+ V R +S++ Q+ + + + S + A + Sbjct: 229 RTAARGGVVVIPAFA--VGRAQSLMYGIYQLKKQGRIHHLPVYLDS--PMAIDATRLYHA 284 Query: 275 KKDQLFLSDESFGLY--------PREQLIVIATGSQGEPRSALAQLSRG----EMRNVKL 322 +D+ LS E E+ ++ G + + ++ G Sbjct: 285 HRDEHRLSPEECEGMCHAAKIVNKVEESKALSAGRGPMVIISASGMATGGRVVHHLKSFA 344 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ---GVRVIAEDAECPVHVSGHPYPNDLKRM 379 ++ I + G + + I + ++S H +++ Sbjct: 345 PDRRNTILFAGYQAGGTRGAAILHGASTVRIHGEDVPIRAEVASLDNLSAHADADEIITW 404 Query: 380 YQWI--RPQVLVAIHGEPL 396 + P+ HGEP Sbjct: 405 LRGFTQTPRRTFVTHGEPE 423 >gi|56422005|ref|YP_149323.1| hypothetical protein GK3470 [Geobacillus kaustophilus HTA426] gi|56381847|dbj|BAD77755.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 264 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + R+ +++D G+S + + I + K L A+ +TH H DH L Sbjct: 17 FYIETDRQRLLVDAGLSGKQLEEL--------FAEIGRHPKQLDALLVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +PVYA+ A F G G +ES V+H Sbjct: 69 VLARKYRLPVYANEKTW---RAMEQTVGDIPPEQKFVFPLGAVRTFGDVDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + + + D + + G+L + Sbjct: 126 AEPMFYVFHYEGKKLALLTDTGYVSERIKKTIENADVFVFESNHDVGMLRMGRYPWSVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + IS + + D++ + + + S Sbjct: 186 RILSDVGHISNEEAGLALADVIGDRTKQIYLAHLSQD 222 >gi|20807203|ref|NP_622374.1| RNA processing exonuclease [Thermoanaerobacter tengcongensis MB4] gi|20515705|gb|AAM23978.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Thermoanaerobacter tengcongensis MB4] Length = 541 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 63/494 (12%), Positives = 135/494 (27%), Gaps = 93/494 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + ++DCG+ + V+ FI + Sbjct: 1 MKITFLGAAKEVTGSCYLVE----TENARFLVDCGMFQGGE----VEDELNYQEFIFDIK 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERV---------- 114 + + +THAH DH G + L+ +YA+ + L Sbjct: 53 D-IDFVLLTHAHIDHSGRIPVLYKRGYRKRIYATHATVDLCRYMLPDSGHIQEMESEWKN 111 Query: 115 ---------SKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 + + +A + + + + H I + + Sbjct: 112 RKRKRAGKPLRDPLYTAEEAEESISIFYGVDYGEVIEPAPHIKVRFNDAGH-ILGSSIIE 170 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + IV +GD +L DVT ++C+ST R + Sbjct: 171 VWVNEKGKETKIVFSGDLGNKKVPLLRDVT--------PINEADYVLCESTYGNRIHEEV 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 S++ K + +I+ G V++ +F+ V R + I+ + L + Sbjct: 223 SDR--AKRLMEIITRTIKRGGNVIIPSFA--VGRTQEILYELHRERDLYKDEIEFLNNIP 278 Query: 266 SVA------IDVGIIKKDQLFLSDESFGLYPREQLIV----IATGSQGEPRSALAQLSRG 315 + K L DE+ + +L + + E AL ++ Sbjct: 279 VYVDSPLATSITDVFAKHPECLDDEAREYIKKGELPLDFPNLHFTHSAEESKALNEIKTP 338 Query: 316 -------------------EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + + + + K+ + Sbjct: 339 MIIISASGMCEAGRIKHHLKHNLWRPECTVLFVGYQAKGTLGRKLLDGEKDVKILGEDIH 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + + E SGH + +P+ + +HGE + + Sbjct: 399 VKAEIEYIESFSGHADQRGILEWISNFEKKPKKIFIVHGEDEAQEELADKIEAQFGIETL 458 Query: 415 PVRNGKMLRLFPDP 428 + + Sbjct: 459 IPSRYDVYDFDKEE 472 >gi|312880691|ref|ZP_07740491.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] gi|310783982|gb|EFQ24380.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] Length = 536 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 89/280 (31%), Gaps = 60/280 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG GE+ + L + I++DCG+ G D + Sbjct: 3 LKF--LGAAGEVTGSNYLLE----TENSRILVDCGL------HQGRDEEAQNRDEFPYNP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 ++ A+ +THAH DH G L L ++A+ + E A + E K Sbjct: 51 GSVDAVLLTHAHMDHSGLLPLLAKRGFKGRIWATTATVEFCEVLWRDSAHLMEEEAEWKT 110 Query: 119 PCISFQ-------------------------AGDKVDVGA-FSIESVRVNHSIPETMALV 152 + + + + + + H I + + Sbjct: 111 RKNARKGLPPVEPLYDLEDVERAISLLQPLSYDEMIRLSPEVQVRFRDAGH-ILGSAMIE 169 Query: 153 IR---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + +V +GD + + E ++ +ST R Sbjct: 170 VWLGPLRDVKVVFSGDLGPMRTVMEKTPSVI--------EDADFVVIESTYGDRLHRSNE 221 Query: 210 EKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 E + ++I + N KG VL+ TF V R + ++ + Sbjct: 222 ETRAEFQSILEQALNEKGKVLIPTFV--VDRAQRVLYELD 259 >gi|221064697|ref|ZP_03540802.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] gi|220709720|gb|EED65088.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] Length = 452 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 84/274 (30%), Gaps = 50/274 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G I+IDCG+ F +L + + E Sbjct: 2 LSLTSLGGAGTVTGSKHLITHG----NTRILIDCGL-FQGLK----NLRELNWQRLAVEP 52 Query: 66 KNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVY------------- 111 K++ A+ +THAH DH G L L ++++ + E + Sbjct: 53 KDIDAVVLTHAHLDHCGYLPRLVLDGFRGKIFSTSATRDVAELILLDSAWLQEKDADFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIE-----------SVRVNHSIPETMALVIR 154 + + + + + + +R I I Sbjct: 113 RKGFSKHKPALPLYRVRDAERTLLQFKPVPLHQETELPGNARLLLRSAGHILGAATAQID 172 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD + D + ++ +ST R Sbjct: 173 IGGKRLVFSGDLGR---FDDMVMPDPE-----PVTAADYIIIESTYGNRRHDRSDAVEAL 224 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 +I + G V++ F+ V R +S+I Sbjct: 225 GDIIERTTRRGGTVVIPAFA--VGRAQSLIYDLW 256 >gi|154253893|ref|YP_001414717.1| beta-lactamase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157843|gb|ABS65060.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 452 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 85/274 (31%), Gaps = 50/274 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L +G I+IDCG+ F +L + + E Sbjct: 2 LSLTSLGGAGTVTGSKHLITHG----NTRILIDCGL-FQGLK----NLRELNWQRLAVEP 52 Query: 66 KNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVY------------- 111 K++ A+ +THAH DH G L L ++++ + E + Sbjct: 53 KDIDAVVLTHAHLDHCGYLPRLVLDGFRGKIFSTSATRDVAELILLDSAWLQEKDAEFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIE-----------SVRVNHSIPETMALVIR 154 + + + + + + +R I + I Sbjct: 113 RKGFSKHKPALPLYRVRDAERALLQFKPVPLHQETELPGNARLLLRSAGHILGAATVQID 172 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD + D + ++ +ST R Sbjct: 173 IGGKRLVFSGDLGR---YDDVVMPDPE-----PVTAADYIIIESTYGNRRHDRSDAVEAL 224 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 +I + G V++ F+ V R +S+I Sbjct: 225 GDIIERTTRRGGTVVIPAFA--VGRAQSLIYDLW 256 >gi|73670083|ref|YP_306098.1| mRNA 3-end processing factor [Methanosarcina barkeri str. Fusaro] gi|72397245|gb|AAZ71518.1| mRNA 3-end processing factor [Methanosarcina barkeri str. Fusaro] Length = 397 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 117/380 (30%), Gaps = 60/380 (15%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 +++D G+ P+ + I+H H DH GA+ +L Sbjct: 4 NDEVLLDYGIKTGD---------IPEYPL---NSMEPKVVLISHGHLDHCGAVPNLMYQ- 50 Query: 92 HVPVYASPFAIG---LL---EAKRVY------ERVSKKIPCISFQAGDKVDVG------A 133 V+ +P LL K + K+D G Sbjct: 51 DPEVFMTPPTADFTFLLGKDTLKLAESTLSGVAPFDPDDLQKLARRTQKIDCGETFKSHG 110 Query: 134 FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + I H IP + + S ++ +TGD+ L + ++ + Sbjct: 111 YRICFYNAGH-IPGASGIFLESESGESLFYTGDFNLKETRLVPGAAEF--------PETD 161 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK--GCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ +ST E E ++ I ++ G L+ F+ + R + I+ + + Sbjct: 162 TLILESTYFGEEHIPRKETE-ERFIESVLSTLDIGGTALIPAFA--IGRTQEILMLLDAH 218 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQ---------LFLSDESFGLYPREQLIVIATGS 301 G + + G + +K + + + + +E +++ T Sbjct: 219 GIQAYVDGMGRDVYKILKKYPEYLKNPELLDRAFGRAIPVKNHQRDSVLKEPSVIVTTAG 278 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 L LSR + V+ + + G + + G + + Sbjct: 279 MLNGGPVLYYLSR-----LYKDPSSKVLLTGYQVEGTNGRLALEHRMIETNGDVLALKPR 333 Query: 362 ECPVHVSGHPYPNDLKRMYQ 381 S H ++LK++ + Sbjct: 334 VEQYDFSAHSGDSELKKLVK 353 >gi|314935221|ref|ZP_07842574.1| metallo-beta-lactamase family protein YycJ [Staphylococcus hominis subsp. hominis C80] gi|313656556|gb|EFS20295.1| metallo-beta-lactamase family protein YycJ [Staphylococcus hominis subsp. hominis C80] Length = 263 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ + G+ + I ++ KNL I +TH H DH L + Sbjct: 18 VESEKGSLLVDVGLT--GKKMEGL------FSQIDRDMKNLNGILVTHEHSDHIKGLGVI 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVYA+ +E K + F + + F IES V+H + Sbjct: 70 ARRYGLPVYANEKTWKAIEKK---DDKIPMDQKFIFNPYETKSIAGFDIESFNVSHDAID 126 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 127 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCRYPWKTKQRI 186 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 187 LSDMGHVSNEDAGHAMADVITGHTKRIYLSHLSRD 221 >gi|186475870|ref|YP_001857340.1| beta-lactamase domain-containing protein [Burkholderia phymatum STM815] gi|184192329|gb|ACC70294.1| beta-lactamase domain protein [Burkholderia phymatum STM815] Length = 454 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 98/324 (30%), Gaps = 64/324 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKE 64 + LG + + L S I+IDCG+ GV +L + + Sbjct: 1 MKLTFLGASETVTGSKYLLE----ESGIRILIDCGL------FQGVKNLRMRNWMPLPVA 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------ 111 +++ + +THAH DH G L L + V+ +P L E Sbjct: 51 AESIDTVILTHAHIDHSGYLPLLVRNGFNGRVHCTPGTAALCEIMLRDSARLQEEEADFA 110 Query: 112 --ERVSKKIP----------------CISFQAGDKVDVGA-FSIESVRVNHSIPETMALV 152 SK P + VD+G S + H I ++V Sbjct: 111 NRHGFSKHHPALPLYTMQDAERALRLIVPCTFDHPVDLGHGLSFRFLPAGH-ILGAASVV 169 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 I + +GD +D I+ L+ +ST R + + Sbjct: 170 ICRHHKVLAFSGDVGRPNDPIMRPPAPLA--------HADYLIVESTYGDRLHPESNPED 221 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 I+ G V++ F+ V R + I+ ++ + V V Sbjct: 222 ELAQIFTKTFAKGGVVVMPCFA--VGRAQEILYYIAKLK-----ETRRMANV-----PVY 269 Query: 273 IIKKDQLFLSDESFGLYPREQLIV 296 + +++ +L + Sbjct: 270 LDSPMATNVTEVYRKHLDEHRLTI 293 >gi|254458415|ref|ZP_05071840.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] gi|207084723|gb|EDZ62010.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] Length = 197 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 19/173 (10%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + K +ID PGV+ +++ + N +AI TH H DH + Sbjct: 15 CYIASLDGKDFIID----------PGVNA----TSWVEQNVTNPVAILNTHGHFDHVWSN 60 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +L L++P+Y + LL+ + P + ++ + ++ Sbjct: 61 AELQKKLNIPLYTPKDDVMLLKESSWMPDLPPSTPDFEVKPDEEFNFDGVKVKFHHFPGH 120 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD-----KDSLCAIGNEGIL 192 P + I + + + + + + + L Sbjct: 121 CPGCSMIEIGDAMFSGDFIFERSIGRTDFPYSSPQDMKDSLERFKKLDFDKTL 173 >gi|260461625|ref|ZP_05809872.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032695|gb|EEW33959.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 391 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 21/176 (11%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG GE G GS I++D G+ G + + ++ A+ Sbjct: 7 GGFGEKGRTSLAVSSGS----DRILLDIGIKVGAS---GAEY----YPALDGSVADIDAV 55 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFA--------IGLLEAKRVYERVSKKIPCIS 122 F++HAHEDH GAL L S P++ + + Sbjct: 56 FVSHAHEDHVGALSWLLSRGYAGPIFMTAETREEAPATLAAYADPADFKRFPIPDDRIEI 115 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 F+ GD + G +I + R H + + + + ++ D D + + D Sbjct: 116 FEPGDTLKSGNLTIRTGRSGH-VVGGVWFAVDDGKSRVAYSADVVPDSNVFVMDTI 170 >gi|320157605|ref|YP_004189984.1| metallo-beta-lactamase family protein RNA-specific [Vibrio vulnificus MO6-24/O] gi|319932917|gb|ADV87781.1| metallo-beta-lactamase family protein RNA-specific [Vibrio vulnificus MO6-24/O] Length = 446 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 76/458 (16%), Positives = 135/458 (29%), Gaps = 106/458 (23%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + ++IDCG+ G D P++ F +K + A+ Sbjct: 7 GGKDTVTGSCHEFRAAGIA----LLIDCGL------FQGKDARPPEVDFPVKH---IDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCI 121 +THAH DH G + L + +Y + L+ ++ ++ + Sbjct: 54 VLTHAHIDHIGRIPWLLAAGFSGAIYCTEATAELVPLMLEDGLRLQLGLNQKQLHQVLDL 113 Query: 122 SFQAGDKVDVGAF-------------------------SIESVRVNHSIPETMALVIRSP 156 + V G + + H + Sbjct: 114 VKKRLKPVKYGEWLRLTPRIKNGNRASRSVSHALENYLYLRFNPAGHILGSAYLEFKLPN 173 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 +V +GD + +L D L +ST + + E+ + Sbjct: 174 DEIVVFSGDLGPRNTPLLPDPISPPR--------ADYLYIESTYGDKLHESVEER--GER 223 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVV 265 + I+ + G +L+ FS V R + I + I+L KRV Sbjct: 224 LKSIINRSLQDGGTILIPAFS--VGRTQELLFDIEQLIFEHNIGTDIPIILDSPLAKRVT 281 Query: 266 SVAIDVGIIKKDQLFLSDESF------------GLYPREQLIVIATGSQGEP-------- 305 + + E Y + + +V S GEP Sbjct: 282 QSYRRFKKLWGREAKRRLEVHRHPLAFEQCITIDDYRQHKALVNRLASTGEPAIVVAASG 341 Query: 306 -------RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 L L E +V A R I E + I+ ++VE ++ Sbjct: 342 MCQGGRIMDYLQALLPDERTDVLFAGYQANGTLGREIQSGEKTV-QIEQKMVEVRAQIHT 400 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 S H DL Q I +P+ + IHGE Sbjct: 401 MSG-----YSAHADQADLLAFIQGIAQKPKEIHLIHGE 433 >gi|46906532|ref|YP_012921.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47091428|ref|ZP_00229225.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|47096380|ref|ZP_00233975.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|224498860|ref|ZP_03667209.1| metallo-beta-lactamase family protein [Listeria monocytogenes Finland 1988] gi|226222927|ref|YP_002757034.1| hypothetical protein Lm4b_00319 [Listeria monocytogenes Clip81459] gi|254825656|ref|ZP_05230657.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|254828751|ref|ZP_05233438.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254831881|ref|ZP_05236536.1| hypothetical protein Lmon1_11030 [Listeria monocytogenes 10403S] gi|254853435|ref|ZP_05242783.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|254900520|ref|ZP_05260444.1| hypothetical protein LmonJ_11919 [Listeria monocytogenes J0161] gi|254913529|ref|ZP_05263541.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254932519|ref|ZP_05265878.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|254937890|ref|ZP_05269587.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|254992481|ref|ZP_05274671.1| hypothetical protein LmonocytoFSL_04961 [Listeria monocytogenes FSL J2-064] gi|255520931|ref|ZP_05388168.1| hypothetical protein LmonocFSL_06871 [Listeria monocytogenes FSL J1-175] gi|300764576|ref|ZP_07074568.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|46879797|gb|AAT03098.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015254|gb|EAL06192.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|47020105|gb|EAL10841.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225875389|emb|CAS04086.1| Unknown [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601158|gb|EEW14483.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258606805|gb|EEW19413.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|258610498|gb|EEW23106.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|293584074|gb|EFF96106.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|293591539|gb|EFF99873.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|293594901|gb|EFG02662.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|300514683|gb|EFK41738.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|328467901|gb|EGF38941.1| hypothetical protein LM1816_09200 [Listeria monocytogenes 1816] gi|328476130|gb|EGF46839.1| hypothetical protein LM220_01792 [Listeria monocytogenes 220] gi|332310709|gb|EGJ23804.1| Putative metallo-hydrolase yycJ [Listeria monocytogenes str. Scott A] Length = 276 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|217965612|ref|YP_002351290.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|290892557|ref|ZP_06555550.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|217334882|gb|ACK40676.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|290557866|gb|EFD91387.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|307569839|emb|CAR83018.1| metallo-beta-lactamase family protein [Listeria monocytogenes L99] Length = 276 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|16802337|ref|NP_463822.1| hypothetical protein lmo0291 [Listeria monocytogenes EGD-e] gi|224502415|ref|ZP_03670722.1| hypothetical protein LmonFR_07829 [Listeria monocytogenes FSL R2-561] gi|284800590|ref|YP_003412455.1| hypothetical protein LM5578_0337 [Listeria monocytogenes 08-5578] gi|284993776|ref|YP_003415544.1| hypothetical protein LM5923_0336 [Listeria monocytogenes 08-5923] gi|16409656|emb|CAD00818.1| lmo0291 [Listeria monocytogenes EGD-e] gi|284056152|gb|ADB67093.1| hypothetical protein LM5578_0337 [Listeria monocytogenes 08-5578] gi|284059243|gb|ADB70182.1| hypothetical protein LM5923_0336 [Listeria monocytogenes 08-5923] Length = 276 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F + G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKNFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|75762802|ref|ZP_00742626.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489713|gb|EAO53105.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 81 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 1/81 (1%) Query: 475 NHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSAL 534 + + P+I+ G Y + + + T + + + + ++ I+ L Sbjct: 2 KEFKVAAGPDIISRGF-VYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTL 60 Query: 535 RSLLKKVWGKKPLVTVFINKI 555 L + ++P++ I +I Sbjct: 61 APFLYEKTKRRPMILPIIMEI 81 >gi|306821537|ref|ZP_07455137.1| metallo-beta-lactamase YycJ [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550431|gb|EFM38422.1| metallo-beta-lactamase YycJ [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 262 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 17/148 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITFIMKERKNLMAIFITHAH 77 N L I+ID G+S +D + DI + AIFITH H Sbjct: 12 GNCHLV----QKKDNCILIDAGLS----GKATIDAINMHDID-----TSKIRAIFITHEH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + +P+YA+ + K K + DKV +G I Sbjct: 59 SDHIKGAGIISRKFDIPIYATELTWDAMSNKI---GNIKDEHIKIIENADKVCIGDLEIS 115 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD 165 S+ V H + +A + + D Sbjct: 116 SIPVKHDAADPVAYKVTDGKRILSIITD 143 >gi|323529290|ref|YP_004231442.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1001] gi|323386292|gb|ADX58382.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1001] Length = 482 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 74/469 (15%), Positives = 129/469 (27%), Gaps = 82/469 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +R I+IDCG+ F +L + + + Sbjct: 1 MKLTFLGAAETVTGSRYLLE----GARLRILIDCGL-FQGTK----NLRLRNWNPLPIDV 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 + L A+ +THAH DH G L L PVY + L E Sbjct: 52 RTLDAVILTHAHLDHSGYLPVLARMGYRGPVYCTRGTRDLCEIMLRDSARLQEEEAAYAN 111 Query: 112 -ERVSKKIPCIS-------FQAGDKVDVGAFSI----------ESVRVNHSIPETMALVI 153 +SK P + A ++ F + + H I ++V+ Sbjct: 112 RHGLSKHHPALPLYTVDDAEHALQLLEARDFDVPRQLNEQACFRFLPAGH-ILGAASVVL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I +GD D + L+ +ST R Sbjct: 171 CVEGKVIAFSGDIG--------RPDDPIMRAPMPLAHADYLVVESTYGDRLHAKTDPATE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 I+ G V++ F+ V R ++I+ Q+ G + V Sbjct: 223 LAEIFANTFRRGGVVVIPCFA--VGRAQTILHYIAQLK----ATGR-MANVPVFLDSPMA 275 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 QL+ + I+ +Q ++ G + + + R Sbjct: 276 TSVTQLYRHHVGEHRVSSTEANAISHAAQMVRTVDESKAILGRHGPMVIIAGSGMATGGR 335 Query: 334 AIP---GNEVAIGHIKNRLVEQ-----GVRVIAEDAECPVH---------------VSGH 370 + + + Q G + A E +H +S H Sbjct: 336 VVHHLKAFAPDHRNTIALVGYQAAGTRGAALAAGAPEIKIHGEYVRVRATVASLSSLSAH 395 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 +L + PQ HGEP A + + Sbjct: 396 ADYGELLAWLHSLPEAPQRTFVTHGEPAAADAMRRHIEETLHWPCEVPE 444 >gi|16799396|ref|NP_469664.1| hypothetical protein lin0319 [Listeria innocua Clip11262] gi|16412748|emb|CAC95552.1| lin0319 [Listeria innocua Clip11262] Length = 276 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSEQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|317131697|ref|YP_004091011.1| putative metal dependent hydrolase [Ethanoligenens harbinense YUAN-3] gi|315469676|gb|ADU26280.1| putative metal dependent hydrolase [Ethanoligenens harbinense YUAN-3] Length = 262 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 21/153 (13%) Query: 7 VFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 F L G G N G ++ID GVS + + + I + Sbjct: 3 RFCSLYSGSSG----NCIYVEDGDAG----VLIDAGVSMRR--------ICAGLLAIGSD 46 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+F+TH H DH AL L+ +PV+A+P + + Sbjct: 47 ISRVRAVFLTHEHSDHIKALPMLFKKYEIPVFATPGT---IRGACAAVEALNPDRFEQME 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 G +VG ++ S +H E++ I Sbjct: 104 TGCCAEVGGMAVSSFATSHDSLESVGYRISFAG 136 >gi|209693873|ref|YP_002261801.1| putative metallo-beta-lactamase [Aliivibrio salmonicida LFI1238] gi|208007824|emb|CAQ77950.1| putative metallo-beta-lactamase [Aliivibrio salmonicida LFI1238] Length = 484 Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 114/356 (32%), Gaps = 73/356 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLM 69 GG + + S ++ I+IDCG+ KD D G D DI F + L Sbjct: 22 GGKLGVTGSCHELCINSNGNKHGILIDCGLFQGKDAKDKHGNDKKL-DIEFPISH---LK 77 Query: 70 AIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVY----------------- 111 A+ +TH H DH G L L P+Y +P L+ Sbjct: 78 ALILTHTHIDHIGRLPWLLTKGFKQPIYCTPATAELVPLMLDDGLKLQLGLNKGQRERVL 137 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSI-----------------------ESVRVNHSIPET 148 E + K+I I + ++ + + + H I + Sbjct: 138 ELIRKQIKPIPYNQWHRIKLTSTMVPSHSKSSCSSLKAKRPESLNLLLRFQPAGH-ILGS 196 Query: 149 MALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + I+ P +V +GD + +L D L+ +ST + Sbjct: 197 AYVEIKLPNDEIVVFSGDLGPSNTPLLPDPISPKR--------ADLLVIESTYGNKLHDS 248 Query: 208 ISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSI---IDIAEQIG-----RKIVL 256 + + K + +I++ + G +++ FS V R + + I+ I+L Sbjct: 249 VETR--AKRLQEIIERSLQDGGAIIIPAFS--VGRTQELLFDIEHLIHHNKIDSKIPIIL 304 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 +V + + + + +P I S E + +L Sbjct: 305 DSPLANKVTKQYRRFKKL-WSKEAKTKLNNQRHPLNFEQCITIESHKEHMQIVNRL 359 >gi|156092661|ref|XP_001612477.1| cleavage and polyadenylation specifity factor protein [Plasmodium vivax SaI-1] gi|148801279|gb|EDL42684.1| cleavage and polyadenylation specifity factor protein, putative [Plasmodium vivax] Length = 858 Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + LGG E+G + + S+ + IM+DCG+ G+ P Sbjct: 2 NNINIVCLGGASEVGRSCVIIE----SANRSIMLDCGI---HPAFMGI-GCLPIYD--AY 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH H DH GAL L + VY + + +K + Sbjct: 52 DISKVDLCLITHFHMDHSGALPYLVNRTRFKGKVYMTEATKSICYLLWNDYARIEKCMHM 111 Query: 122 SFQA 125 + Sbjct: 112 MNKM 115 >gi|227500612|ref|ZP_03930661.1| possible beta-lactamase [Anaerococcus tetradius ATCC 35098] gi|227217199|gb|EEI82543.1| possible beta-lactamase [Anaerococcus tetradius ATCC 35098] Length = 263 Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 17/148 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 N++ Y I+ID G S ++L G I + K+L IFITH H Sbjct: 13 GNVSFLEYKGCR----ILIDAGFSGKKIENLLG---------QIGENPKDLDGIFITHEH 59 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L +P+YA+ L K K+ F+ + ++ + I Sbjct: 60 NDHIQGAGVLSRRFDIPIYANQGTWKGLTQKIK---KLKEENIKVFKTNEFINFKSMDIL 116 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD 165 V ++H E +A VI + D Sbjct: 117 PVAIHHDAMEPVAYVIYIGNKKLTILSD 144 >gi|323140405|ref|ZP_08075334.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] gi|322415090|gb|EFY05880.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] Length = 535 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 63/506 (12%), Positives = 139/506 (27%), Gaps = 112/506 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-- 63 + LG + + L G+ ++DCG F L I + + Sbjct: 1 MKITFLGATRTVTGSCYLLEVGA----HKFLVDCG-MFQGSKL---------IKALNEKE 46 Query: 64 ---ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------- 105 + A+ +THAH DH G L L P+Y + L Sbjct: 47 FLFHPGEIEAVVLTHAHVDHSGLLPKLVKEGFRSPIYCTKSTEELCSILLPDSAHIQEGE 106 Query: 106 ------EAKRVYERVSKKIPCISFQAGDKVDVG------AFSIES-----VRVNHSIPET 148 + R +++ + + + + F+I RV I + Sbjct: 107 AEYANRKGMRAGKKIVEPLFTVDDASRALHLFKLRSFGEPFNIVPGVTVTFRVAGHILGS 166 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + ++ TGD + I+ D G ++ +ST R Sbjct: 167 AFVEMSVTEGDKKTRLIFTGDIGQPNQPIIEDPA--------VAGGADFIITESTYGNRI 218 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLG 258 ++G NI + G V++ F+ V R + ++ +++ + + Sbjct: 219 HEAYDKEGELANIINDTVERGGNVIIPAFA--VGRTQVLLYYFQKLQAEGKIPEIPIYVD 276 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESF-----------------------GLYPREQLI 295 S + + + D+ + + P +++ Sbjct: 277 SPMANRATQITMTNPEEYDEEARALYAMQGRRLVSMHNLRFTATVQESMAINEIPGSKIV 336 Query: 296 VIATGSQG--EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 + A+G L E ++ + + G + + Sbjct: 337 ISASGMADAGRILHHLKHNLWREDSSIVF-----AGYQAEGTIG-----RRLIEGIKRIK 386 Query: 354 VRVIAEDAECPVH----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + ++ S H L Y ++ P+ HGE + + + Sbjct: 387 IMGEDIRVNAKIYNMKGFSAHADKQQLLAWYSSMKEVPKAFFVTHGELDAAMELADSLGR 446 Query: 408 EGIACVPPVRNGKMLRLFPDPIEIID 433 G + ++ + Sbjct: 447 NLGTATYIPHFGDCAEIHGTEWQMHE 472 >gi|226357274|ref|YP_002787014.1| beta-lactamase [Deinococcus deserti VCD115] gi|226319264|gb|ACO47260.1| putative beta-lactamase [Deinococcus deserti VCD115] Length = 489 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 66/476 (13%), Positives = 136/476 (28%), Gaps = 86/476 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 +M L + + +++DCG+ F D P F E ++L A+ +THAH Sbjct: 14 GSMHLLTLNTAGGERHVLVDCGL-FQGADELEARNHEP-FPF---EAQDLDAVILTHAHL 68 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERV----------------- 114 DH G L L VY + L E A+ E Sbjct: 69 DHVGRLPLLVRRGYRGAVYCTAPTAALAETVLLDSARLQVEGYRQALRRARRQGREDEVL 128 Query: 115 -----SKKIPCISFQAGDKVDVG------AFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + ++ G + R H I + L++ +P ++ + Sbjct: 129 PPLYEEDDVHRTLALLRPHLEFGKTTKVADLKVTPERAGH-ILGSAWLLMETPDARLIMS 187 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK-GIKKNIYDIMK 222 GD + + D T A++ ++T A R ++ Sbjct: 188 GDLGNRESGLQLDFT--------PPPAADAVVLETTYANRTHRPWAQTLEEFAGALRTSI 239 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ--IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF 280 A G +L+ +F+ + R + I+ + ++ + + +++ + Sbjct: 240 RAGGKILIPSFA--IERAQVILYTLKDLMNRGEVPHIPVFMDSPMAMRATYEYFEFGDEL 297 Query: 281 LSDE----SFGLYPREQLIVIATGSQGE------------PRSALAQLSRG------EMR 318 ++ G P + + E + ++ G + Sbjct: 298 ITPVREALQSGEDPFRPSTLHVVNTSAESQRLNRYDGPAIIMAGNGMMTGGRIQHHLKHH 357 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIG-----HIKNRLVEQGVRVIAEDAECPVHVSGHPYP 373 K + ++ + + V +V S H Sbjct: 358 LWKPSTSLIIVSYQSPSSLGGRIVEGAETVRLMGEEVAVRAQVHTIGG-----FSAHADR 412 Query: 374 NDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPI 429 +DL + +HGE + + + Q G+ K+ L P Sbjct: 413 DDLLAFLDTAGKPHVWLVHGETSVMSSFLPVLEQHGMKGDIVPDRQKVDLLGPGFA 468 >gi|156100557|ref|XP_001616006.1| cleavage and polyadenylation specifity factor protein [Plasmodium vivax SaI-1] gi|148804880|gb|EDL46279.1| cleavage and polyadenylation specifity factor protein, putative [Plasmodium vivax] Length = 934 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + LGG E+G + + S+ + IM+DCG+ G+ P Sbjct: 2 NNINIVCLGGASEVGRSCVIIE----SANRSIMLDCGI---HPAFMGI-GCLPIYD--AY 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH H DH GAL L + VY + + +K + Sbjct: 52 DISKVDLCLITHFHMDHSGALPYLVNRTRFKGKVYMTEATKSICYLLWNDYARIEKCMHM 111 Query: 122 SFQA 125 + Sbjct: 112 MNKM 115 >gi|56711354|ref|NP_001008683.1| DNA cross-link repair 1A protein [Gallus gallus] gi|73620743|sp|Q5QJC4|DCR1A_CHICK RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1 homolog A; Short=chSNM1A gi|47156206|gb|AAR27404.1| SNM1A [Gallus gallus] Length = 972 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 108/326 (33%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L P+Y + L+++K K+ + Sbjct: 656 AYFLTHFHSDHYCG---LTKNFVFPLYCNKITGNLVKSKLR----VKEQYINVLPMDTEC 708 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P ++ P I+HTGD++ D + A+ Sbjct: 709 IVNGIKVLLLDANH-CPGATMILFYLPSGTAILHTGDFRADPSM--------ERYPALIG 759 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKGCVLVTTFSSSVSRIRSIID 245 + I L D+T E T S++ + + + M LV + S+ + + + Sbjct: 760 QKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSIGKEKVFLA 819 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IAE +G K + + + + + + P Q+ + Sbjct: 820 IAEVLGSKASMS-RDKYKTLQCLESAAVNSLITMNWDGTLLHILPMMQI------NFKGL 872 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + L + S + + S +++ + + Sbjct: 873 QDHLNKFSENFDQVLAFKPTGWTYSDSCLS-------------VMDIKPQTRGNITIYGI 919 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 920 PYSEHSSYLEMKRFVQWLKPQKIIPT 945 >gi|289433641|ref|YP_003463513.1| metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169885|emb|CBH26425.1| metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 276 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 E++ F L G G N L G + I++DCG+S + G+ Sbjct: 12 TEQIRFSILASGSSG----NATLVETG----DQKILVDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMSDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWQAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|253565569|ref|ZP_04843024.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_2_5] gi|265763901|ref|ZP_06092469.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_16] gi|251945848|gb|EES86255.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_2_5] gi|263256509|gb|EEZ27855.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_16] gi|301163352|emb|CBW22902.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis 638R] Length = 267 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G+ G+ + + I Sbjct: 1 MKIRFISLASGSSG----NCYYLG----TEKYGILIDAGI--------GIRTIKKSLKDI 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ L L++PVY + G+ ++ + E++ + Sbjct: 45 NVTMDSIRAVFITHDHADHIKAVGHLGEKLNIPVYTTARVHAGINKSYCMTEKLHGSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + + F IES V H + + I D Sbjct: 105 LEKE--EPMQLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|228475514|ref|ZP_04060232.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228270296|gb|EEK11731.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 263 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + + I ++ KNL I +TH H DH L + Sbjct: 18 VESEKGSLLVDVGLTGKKMENL--------FSQIDRDIKNLNGILVTHEHSDHIKGLGVI 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVYA+ +E K + F + + F IES V+H + Sbjct: 70 ARRYGLPVYANEKTWKAIEKK---DDKIPMDQKFIFNPYETKSIAGFDIESFNVSHDAID 126 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + D + +D + + +L + Sbjct: 127 PQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCRYPWKTKQRI 186 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 187 LSDMGHVSNEDAGHAMADVITGHTKRIYLSHLSRD 221 >gi|256822533|ref|YP_003146496.1| beta-lactamase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796072|gb|ACV26728.1| beta-lactamase domain protein [Kangiella koreensis DSM 16069] Length = 451 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 72/483 (14%), Positives = 142/483 (29%), Gaps = 96/483 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE- 64 + LGG + + L ++ +++DCG+ F ++ + Sbjct: 1 MKITFLGGTETVTGSKFLVE----TTTSRVLVDCGL-FQG------------YKWLRERN 43 Query: 65 -------RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------- 105 K+L A+ +THAH DH G + L+ PVY L Sbjct: 44 WQEPLFDIKSLDAVILTHAHLDHSGYIPALYKQGYRGPVYTHHATKDLCAILLADSGHIQ 103 Query: 106 --------EAKRVYERVSKKIPCISFQAGDK-----------VDVGAFSIESVRVNHSIP 146 + K + + + + VG S H I Sbjct: 104 EEDAKYYSKHKLGKHAHPQPLYDRATAEESMTLFQSLEFGEIIVVGDLSFHLQSAGH-IL 162 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++++ + I +GD D +L + L+ +ST R Sbjct: 163 GAGSVILEAEGKRIGFSGDVG--------RPDDILTLPPKPLPDLDLLLLESTYGNRRHD 214 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTF-SSSVSRIRSIIDIAEQIG-------------- 251 + I + G VL+ +F ++ ++ + G Sbjct: 215 TENPYKQLAKIVNEAAQRGGAVLIPSFAVGRAQTLQHMLTTLMKSGDIPKLPIYLDSPMA 274 Query: 252 ---RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 I S L R+ ++S L + +I GS ++ Sbjct: 275 INVSDIYCHYSKLHRLTDEECHRMCQTTTYTRSVEDSKALAQQHYPHIIIAGSG---MAS 331 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV--- 365 ++ + + K TV+FS G + + + + V Sbjct: 332 GGRILHH-FKRLLGDPKTTVLFSGYQAGG--TRGAKMLDGAETVKIHGKWIPIKARVEVL 388 Query: 366 -HVSGHPYPNDLKRMYQWIRPQ---VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 H+SGH ++++ + + + IHG+P L + + E V + Sbjct: 389 QHLSGHGDYVEIEQWLKSSDLKKQLSIQLIHGDPEALESMQNYLQSETNFEVDVASYHRT 448 Query: 422 LRL 424 L + Sbjct: 449 LHV 451 >gi|90579300|ref|ZP_01235110.1| hypothetical protein VAS14_06323 [Vibrio angustum S14] gi|90440133|gb|EAS65314.1| hypothetical protein VAS14_06323 [Vibrio angustum S14] Length = 457 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 101/288 (35%), Gaps = 42/288 (14%) Query: 25 GYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + +++DCG+ ++ D I + K + A+ ITH+H DH G Sbjct: 16 CHELVIGNSSLLVDCGLFQGAENKNNKFD--------IEFDVKRIEALLITHSHIDHIGR 67 Query: 84 LHDLWSF-LHVPVYASPFAIGLLEAKRVY-----------------ERVSKKIPCISFQA 125 + L + P+YA+ LL + + +KI + + Sbjct: 68 IPWLLAAGFTGPIYATEATAALLPLMLEDGLKIQLGFNSQQCKQFTQLIQQKIRPVPYDC 127 Query: 126 GDKVDV---GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 KV + + SI + H + V +V +GD + +L TD Sbjct: 128 WAKVVLLNGDSVSIRFRQAGHILGSAYIEVELPDQNIVVFSGDLGPCNTPLL---TDP-- 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + + L+ +ST + I ++ + I + G +L+ FS V R + Sbjct: 183 ---VSPDKVDVLVIESTYGDKALHDIQQREAHLRKIIEHSLQDGGAILIPAFS--VGRTQ 237 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 ++ E I VL GSS + +I L L + Sbjct: 238 ELLFDIENI-LADVLTGSSHDNSYRRWKSLPVILDSPLALKVTEQYRH 284 >gi|307265251|ref|ZP_07546809.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919695|gb|EFN49911.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 614 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 79/229 (34%), Gaps = 37/229 (16%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP--GVDLVFPDITFIMKE 64 F GG IG + L Y + I++D G L + + DI Sbjct: 202 KFFCWGG-DNIGASSYLVSYEGIN----ILLDAGALIKDKTLYYNSIKNLPIDI------ 250 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA-------KRVYERVSK 116 K++ + ITHAH DH+G + +L L+ P+ S +L K + + Sbjct: 251 -KDIDLVIITHAHLDHFGGIVELLRKGLNSPIIMSRATHEILRQIFLRGHTKLEIKIEEE 309 Query: 117 KIPC--------ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 I + ++ ++ H I +A+ + I +TGD+ L Sbjct: 310 IINFDSQIISFDTEEERSFRIKNKEVKLKLFPAGH-ILGAVAVYLEIEGIKIFYTGDFTL 368 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 D L + + + L+ ++T + K ++ + Sbjct: 369 KDVESN------KGLRFLPDLKVDILISEATYGYGNNFGVQNKYLQDKL 411 >gi|302343374|ref|YP_003807903.1| RNA-metabolising metallo-beta-lactamase [Desulfarculus baarsii DSM 2075] gi|301639987|gb|ADK85309.1| RNA-metabolising metallo-beta-lactamase [Desulfarculus baarsii DSM 2075] Length = 545 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 93/281 (33%), Gaps = 53/281 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++DCG+ F ++ DI+ Sbjct: 1 MQITCLGATRTVTGSSFLVEL---DDQTCFLVDCGL-FQGGRQ--IEQRNWDIS--DHRP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 +++ AI+ITHAH DH G + L + P+YA+ LL Sbjct: 53 QDIKAIYITHAHIDHSGLVPRLTRQGYNGPIYATKATSELLKILWLDSAHIQQMEAQWQS 112 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGAFSI------------ESVRVNHSIPETMALV 152 + KRV + + + + + V H I +L Sbjct: 113 RKNKRVGRKDIEPLYETVDAEAAIALIRPVEMNAPLELIPGVTSTFVSAGH-ILGAASLH 171 Query: 153 IRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAIGNEGILALMCDSTNAMREGTCI--S 209 + + H + D V D + + + L ++T R I S Sbjct: 172 LSLQAADGAHNVGFSGDVGRQKQLIVPDPEIMPR-----VDTLFMETTYGQRLHKSIADS 226 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK + I K G V++ +F+ V R + +I + Q Sbjct: 227 EKELMDVITQAFKEG-GRVVIPSFA--VERTQELIYVMAQA 264 >gi|330995657|ref|ZP_08319555.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329574716|gb|EGG56277.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 281 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 14/164 (8%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L F+ LG G G + Y S I+ID G+ G+ + Sbjct: 10 NTDMLKFICLG-SGSSGNS-----YFLFSENYGILIDAGI--------GIRTLKKHFNTC 55 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + A+ ITH H DH A+ L + +PVYA+ G ++ K+ Sbjct: 56 GLSLKQIKAVLITHDHADHVKAVGSLANEYGIPVYATELVHGGIKRNYCVHPKLKEENIR 115 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 Q G +++ F I V H + + ++ N D Sbjct: 116 FLQKGQTLELDHFVITPFDVPHDSADNVGYSVQYGDVNFCLITD 159 >gi|153834337|ref|ZP_01987004.1| cleavage and polyadenylation [Vibrio harveyi HY01] gi|148869262|gb|EDL68280.1| cleavage and polyadenylation [Vibrio harveyi HY01] Length = 441 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 35/256 (13%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITFIMKERKNLMA 70 GG + + + + I++DCG+ +D L G I + A Sbjct: 7 GGKHSVTGSC----HELQLPKGSILVDCGLFQGRDALANGQKRSL----EIEFSIHRIKA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------EAKRVYERV 114 + +THAH DH G L L + +Y + L+ +A+R Sbjct: 59 LVLTHAHIDHIGRLPWLLAAGYKGKIYCTHATAELVPLMLEDGLKLQLGLNKAQREQVLN 118 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDWKLDDDAI 173 K + + + + + I + + + P +V +GD + + Sbjct: 119 VIKKRLVPCDYQTWLPLKGLAYLRFQPAGHILGSAYVEFKLPNNEVVVFSGDLGPSNTPL 178 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 L D L +ST ++ + + ++ + I + ++ Sbjct: 179 LPDPISPTR--------ADYLFIESTYGNKKHESVESRS-QRLLSIINHALEDGGVIIIP 229 Query: 234 SSSVSRIRSIIDIAEQ 249 + SV R + ++ EQ Sbjct: 230 AFSVGRTQELLFDIEQ 245 >gi|313634981|gb|EFS01366.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL N1-067] Length = 276 Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 E++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TEQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMSDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWQAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKSFGSLQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|221110035|ref|XP_002170873.1| PREDICTED: similar to SNM1A, partial [Hydra magnipapillata] Length = 1070 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 96/323 (29%), Gaps = 38/323 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 ++H H DHY L VY S L+ ++ + + + + Sbjct: 769 LLSHFHSDHYKG---LSKKFSGKVYCSKITANLVISQL----HVFQDNVVVLPMNQLIRL 821 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G + + NH P ++ + I+H GD+++ + D + I Sbjct: 822 GDVHLTLLDANH-CPGSVMFLFEFNNKRILHVGDFRVHE--------DMLRNEKLCKIPI 872 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMK---NAKGCVLVTTFSSSVSRIRSIIDIAE 248 L D+T + I + + L+ + ++ + R +A Sbjct: 873 NELYLDTTYCDPTYIFPPQNEIIDFVVKTARSFLQKNKKTLIVCGTYTIGKERVFYSLAN 932 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 ++ KI + + +++ + K L Y Q+ V+ P Sbjct: 933 ELCLKIGVTKEKM-KILKCLESKDLESKLTL--------DYNIAQVHVL-------PLFG 976 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + V I + + A N + V S Sbjct: 977 INIKKLNDHMEVYKKYGYNHILAFKPTGWTYNASFKTINDISP---VTSGNITIYSVPYS 1033 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H +LK Q IRP ++ Sbjct: 1034 EHSSFAELKSFVQVIRPNKIIPT 1056 >gi|124003474|ref|ZP_01688323.1| exonuclease of the beta-lactamase fold involved in RNA processing [Microscilla marina ATCC 23134] gi|123991043|gb|EAY30495.1| exonuclease of the beta-lactamase fold involved in RNA processing [Microscilla marina ATCC 23134] Length = 476 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 75/492 (15%), Positives = 145/492 (29%), Gaps = 89/492 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD------LVFPDIT 59 + G ++ +M L + ++IDCG ++ P D +FP Sbjct: 1 MRLTFWGAARQVTGSMHLLE---LDNDFKVLIDCGHDLERERKPLTDENGLYQGIFPF-- 55 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAK 108 E + A+ +THAH DH G L +L +Y + L L + Sbjct: 56 ----EPSQINAVVLTHAHIDHSGFLPNLVREGFEGVIYCTDATYDLTNLLLHDAASLNQR 111 Query: 109 RVYERVSKKIPCISFQ------------AGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 ++ + K + +G F R I + + + + Sbjct: 112 KLKKIAKSKKFNPVHKEQKYAKRELFLAPHVHEALGHFRTLLFRQRKKIGDGIYITLIPT 171 Query: 157 VGNIVHTGDW----KLDDDAILGDVTDKDSLCAI------GNEGILALMCDSTNAMREG- 205 + + D L D + L+C+ST R Sbjct: 172 GHLLGAANALIEVEENDQTKKLCFSGDLGRYNYPLLSDPEPTPEVDYLICESTYGNRYHQ 231 Query: 206 -TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 E+ + I + G +L+ FS V R ++++ ++ + L + Sbjct: 232 SEGSPEEIVLDVIKRACVDKPGRLLIPAFS--VGRTQALLFTLNKLCSEGKLPPIKIYTD 289 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS--QGEPRSALAQLSRGEMRNVKL 322 +A + + L L ++ + + + + E +S + + Sbjct: 290 SPLAKASTQVYQKHLSLLNKEAQEFHKSNQSLFDFENLIYLETSKQSKAISNYNHPYMVV 349 Query: 323 AEKDT-----------------------VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 + + +S+ GN + N Sbjct: 350 SSSGMIQGGRIEYHIKQNIQNSLATVLLIGYSAEGTLGN-----DLLNGRKYIVADRHEL 404 Query: 360 DAECPV----HVSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIAC 412 + SGH NDL + +W P + L +HGE + KE +EG + Sbjct: 405 AVNATIERTDIFSGHGDLNDLIKFVKWQSPEKLKKLFLVHGESSSMDDFKETLGKEGYSQ 464 Query: 413 VPPVRNGKMLRL 424 V G+ L Sbjct: 465 VEIPEKGQSFEL 476 >gi|256960266|ref|ZP_05564437.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|293382132|ref|ZP_06628075.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293388557|ref|ZP_06633060.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312905772|ref|ZP_07764794.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909032|ref|ZP_07767892.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256950762|gb|EEU67394.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|291080415|gb|EFE17779.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291082079|gb|EFE19042.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310628251|gb|EFQ11534.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311290594|gb|EFQ69150.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 429 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 133/339 (39%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N+ + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENSNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|148269413|ref|YP_001243873.1| metallo-beta-lactamase superfamily hydrolase-like protein [Thermotoga petrophila RKU-1] gi|147734957|gb|ABQ46297.1| hydrolase of the metallo-beta-lactamase superfamily-like protein [Thermotoga petrophila RKU-1] Length = 522 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 67/505 (13%), Positives = 146/505 (28%), Gaps = 122/505 (24%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L G IG N S ++D G++F + + + P I+ + Sbjct: 1 MRIEILDGHRNIGGNKIRV---VDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGRILHDL 57 Query: 66 KNLMAI------------------------FITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L I F++HAH DH G + + +P+ + Sbjct: 58 LKLKMIPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLI--DEKIPLLMTGET 115 Query: 102 IGLLEA-----------------------KRVYERVSKKIPCISFQAG------------ 126 ++ A K + + + + + Sbjct: 116 FAVMRASVYTSNSNVLTQLGGKKRRKASDKDLENGIREDLTVSPGNSKSAERLTRRVSFP 175 Query: 127 ------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DA 172 D + + V HS+ L R + +TGD++ Sbjct: 176 KEVELNDDSTVVDMNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAE 235 Query: 173 ILGDVTD---KDSLC----------AIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIY 218 D + L + ++ L L+ + T RE +EK + +N Sbjct: 236 EERYWLDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAM 295 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII---- 274 + + K +LV + R+ + + + + R++VL+ ++ + + Sbjct: 296 RVFRGTKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTD 355 Query: 275 ----------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNV-- 320 +++ E L ++ ++ + + + G + ++ Sbjct: 356 EERSFVRVYHPGKVTYINLEKDALLRAKEEGILLSPEEINLHPEKHTMVAGYWDFPHILD 415 Query: 321 ---KLAEKDTVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVI-------AEDAECPVHVS 368 ++ I S+ E I N L + H S Sbjct: 416 LDERVLNGAVYIHSTSEAYTEEQEIDARRFMNWLRYFNIVPFGIREVNGNIVFTKEFHAS 475 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHG 393 GH P L+++ + P +V +H Sbjct: 476 GHVSPQGLEKILNELNPDYIVPVHT 500 >gi|260662556|ref|ZP_05863451.1| hydrolase [Lactobacillus fermentum 28-3-CHN] gi|260553247|gb|EEX26190.1| hydrolase [Lactobacillus fermentum 28-3-CHN] Length = 270 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 74/229 (32%), Gaps = 22/229 (9%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N ++ I+ID G+S + + + I + + A+F+TH H Sbjct: 19 GGNATYLE----TAGHRILIDAGLSGKQLEQ--------RMEAIGRSLDQVEALFVTHEH 66 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L +PVYA+ +E K G +D+G +E Sbjct: 67 SDHSHGVGVLARRYGMPVYANAGTWAAVEGKI---GKIAPDQKQLLAPGKFLDLGDLQVE 123 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALM 195 + V+H + I + V D + D D + + +L + Sbjct: 124 AFAVSHDAAQPQFYQIHHDDQSFVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMG 183 Query: 196 CDS-----TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 S G +E+G + I + K L + R Sbjct: 184 PYSWPLKQRILGDTGHLSNEEGAGALMEVIGERTKRVFLGHRSQHNNMR 232 >gi|37678556|ref|NP_933165.1| hypothetical protein VV0372 [Vibrio vulnificus YJ016] gi|37197296|dbj|BAC93136.1| conserved hypothetical protein [Vibrio vulnificus YJ016] Length = 446 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 73/458 (15%), Positives = 140/458 (30%), Gaps = 106/458 (23%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + + ++IDCG+ G D P++ F +K + A+ Sbjct: 7 GGKDTVTGSCHEFRAAGIA----LLIDCGL------FQGKDARPPEVDFPVKH---IDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCI 121 +THAH DH G + L + +Y + L+ ++ ++ + Sbjct: 54 VLTHAHIDHIGRIPWLLAAGFSGSIYCTEATAELVPLMLEDGLRLQLGLNQKQLHQVLDL 113 Query: 122 SFQAGDKVDVGAF-------------------------SIESVRVNHSIPETMALVIRSP 156 + V G + + H + Sbjct: 114 VKKRLKPVKYGEWLRLTPRIKNGNRASRFVSHALENYLYLRFNPAGHILGSAYLEFKLPN 173 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 +V +GD + +L D L +ST + + E+ + Sbjct: 174 DEVVVFSGDLGPRNTPLLPDPISPPR--------ADYLYIESTYGDKLHESVEER--GER 223 Query: 217 IYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ------------------IGRKIV 255 + I+ + G +L+ FS V R + ++ EQ + +++ Sbjct: 224 LKSIINRSLQDGGTILIPAFS--VGRTQELLFDIEQLIFEHNIGTDIPIILDSPLDKRVT 281 Query: 256 LLGSSLKRVVSVA--IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP-------- 305 K++ + + + F + Y + + +V S GEP Sbjct: 282 QSYRRFKKLWGREARRRLEVHRHPLAFKQCITIDDYRQHKALVNRLASTGEPAIVVAASG 341 Query: 306 -------RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 L L E +V A R I E + I+ ++VE ++ Sbjct: 342 MCQGGRIMDYLQALLPDERTDVLFAGYQANGTLGREIQSGEKTV-QIEQKMVEVRAQIHT 400 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 S H DL Q I +P+ + IHGE Sbjct: 401 MSG-----YSAHADQADLLAFIQGIAQKPKEIHWIHGE 433 >gi|325289911|ref|YP_004266092.1| RNA-metabolising metallo-beta-lactamase [Syntrophobotulus glycolicus DSM 8271] gi|324965312|gb|ADY56091.1| RNA-metabolising metallo-beta-lactamase [Syntrophobotulus glycolicus DSM 8271] Length = 554 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 68/522 (13%), Positives = 150/522 (28%), Gaps = 97/522 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G G + + L I+IDCG F + +L + D F Sbjct: 1 MKINFF--GASGTVTGSCYLVEASGFR----ILIDCG-MFQGSKIIK-ELNYGDFPF--- 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 + ++ A+ +THAH DH G + L + VYA+P E Sbjct: 50 DPLSIDAVILTHAHIDHSGLIPKLIKSGYNGKVYATPATKAFCEVMLPDSGHIQEMEIER 109 Query: 110 ------------------VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMA 150 + ++ +S V +G E H I + Sbjct: 110 KNRKRVRAGLLPLAPIYTAEQGLAALNSFLSVPYHQNVVLGDGAEFEFYDAGH-ILGSSY 168 Query: 151 LVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++++ I+ +GD + + + G ++ ++T R T Sbjct: 169 VMLKITEGDGVKKILFSGDIG---SSDQPYIENPSK-----VGGADVVIMETTYGDRMHT 220 Query: 207 CISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-GRKIVLLGSSLKR 263 ++ + I D ++ + +V R + ++ + + +K++ + Sbjct: 221 EKPQRLERFAQIIQDAFARGDHIII---PAFAVERTQDLLYYLKDLQDKKMIPVIPIYVD 277 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP------------------ 305 I + DE+ + ++ Sbjct: 278 SPLAVAATKIFNRHPDVFDDETTEKIDQGNNPLVMKNLHFSVTTDDSIRLNNLQERAIII 337 Query: 306 ----RSALAQLSRG-EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + ++ + K E TVIF G + + E + Sbjct: 338 SASGMADAGRIKHHLKHNLWK--ENTTVIFVGYQAEG--TLGRRLVDGAEEVTIHGETIT 393 Query: 361 AECPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + + S H +L ++ + ++ +HGE L L ++ Sbjct: 394 VKANIVQLMGFSSHADQRELLDWVEYAGKDAEEIILVHGERESLDGFSLLLQEKLNKQPL 453 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA 456 G+ + I + L + + + + D + Sbjct: 454 IPELGESIEFKDGQIICVKPDKPWLKVMEE-RLSEIEDEKLK 494 >gi|315174764|gb|EFU18781.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 429 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 130/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + L Q+ L E I S ++ + + + L + + Sbjct: 322 LTDKTD------YLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLANKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|292490277|ref|YP_003525716.1| beta-lactamase [Nitrosococcus halophilus Nc4] gi|291578872|gb|ADE13329.1| beta-lactamase domain protein [Nitrosococcus halophilus Nc4] Length = 482 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 90/293 (30%), Gaps = 65/293 (22%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFP 56 M E+ L LG GE+ + L G K I++DCG+ PKD+ + Sbjct: 1 MSREQRTLQIQFLGAAGEVTGSCHLVQVG----EKKILLDCGLIQGRPKDEARNREPFPF 56 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVS 115 D + + A+ ++HAH DH G L L PVY L Sbjct: 57 DP-------ETIDAVVLSHAHIDHSGRLPLLIKSGYSGPVYTHRATADLCRTMLRDAGFL 109 Query: 116 KKIPCISFQA--------------------------------GDKVDVGAFSIESVRVNH 143 + + + SI H Sbjct: 110 SEKDAEWENRKRERKGLPLVEPLFTIQDVEAALGQFKELDYGRQQTILPGVSIRLSDAGH 169 Query: 144 SIPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 I + + +V++GD IL D T + ++ +ST Sbjct: 170 -ILGSAVTELWLSQNGQVRKLVYSGDLGRSGMPILADPT--------PIQDADLVVMEST 220 Query: 200 NAMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 R + +K D + N KG +L+ F+ V R + I+ + + Sbjct: 221 YGNRLHRTWVQTLTELKGIFNDTLTNGKGNILIPAFA--VGRTQEILYLFAKY 271 >gi|227514137|ref|ZP_03944186.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931] gi|227087508|gb|EEI22820.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931] Length = 271 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 74/229 (32%), Gaps = 22/229 (9%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N ++ I+ID G+S + + + I + + A+F+TH H Sbjct: 20 GGNATYLE----TAGHRILIDAGLSGKQLEQ--------RMEAIGRSLDQVEALFVTHEH 67 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L +PVYA+ +E K G +D+G +E Sbjct: 68 SDHSHGVGVLARRYGMPVYANAGTWAAVEGKI---GKIAPDQKQLLAPGKFLDLGDLQVE 124 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALM 195 + V+H + I + V D + D D + + +L + Sbjct: 125 AFAVSHDAAQPQFYQIHHDDQSFVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMG 184 Query: 196 CDS-----TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 S G +E+G + I + K L + R Sbjct: 185 PYSWPLKQRILGDTGHLSNEEGAGALMEVIGERTKRVFLGHRSQHNNMR 233 >gi|315301285|ref|ZP_07872503.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] gi|313630345|gb|EFR98260.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] Length = 276 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 E++ F L G G N L G + I++DCG+S + G+ Sbjct: 12 TEQIRFSILASGSSG----NATLVETG----DQKILVDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMSDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G+ +ES V+H E M + V D + D Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGA 172 Query: 179 DKDSLCAIGN 188 D + + Sbjct: 173 DAYLFESNHD 182 >gi|304405933|ref|ZP_07387591.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304345176|gb|EFM11012.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 268 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 21/164 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITH 75 N + + +++D G+S + D + + ++ A+F+TH Sbjct: 14 GNATIV----TNDEHTVLVDAGLSAKRIDQL-----------LAERGVSGHDIDALFVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH L + ++PV+A+ G +E + Q G+ + G+ Sbjct: 59 EHSDHIKGLGAVARKFNIPVFANEATWGAME---KHVGTIAPEKRNIMQTGETFEFGSMK 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++S ++H E + + D D + + D Sbjct: 116 VQSYPISHDAVEPVGYCFTEDGYKLSLATDLGYVSDKVRQHIID 159 >gi|294054831|ref|YP_003548489.1| RNA-metabolising metallo-beta-lactamase [Coraliomargarita akajimensis DSM 45221] gi|293614164|gb|ADE54319.1| RNA-metabolising metallo-beta-lactamase [Coraliomargarita akajimensis DSM 45221] Length = 452 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 123/440 (27%), Gaps = 86/440 (19%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 G IG N GS + I+ID G+ L G + PD I +L I + Sbjct: 9 SGGIGANSHFIQLGSFN----ILIDAGL---HPKLLGREA-MPDFDEID--GIDLDLIIL 58 Query: 74 THAHEDHYGALHDLWS-FLHVPVYAS--PFAIG---------LLEAKRVYERVSKKI--- 118 TH H DH G+L + V S + +++ +R + Sbjct: 59 THCHLDHLGSLPIIAGLHPQAEVITSIPNLTLAPRMLRNSINVMKRQREEHGLLDYPLFL 118 Query: 119 -------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + H + A+ + +V +GD Sbjct: 119 HRDIAALNKQMSGQRFERPEIYIKGDDKLDVILHPSGH-VAGAAAVELVHEGRRVVFSGD 177 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA--MREGTCISEKGIKKNIYDIMKN 223 D L + I L+ ++T R T + + + I + Sbjct: 178 VLFDAQRTLPG-------AHLPEGPIDTLVLETTRGATARCPTKTRASEVDRLVSQINEI 230 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID--------VGIIK 275 +G ++ R++ +I KI+ S R+ I + Sbjct: 231 IEGGGSCLIPVFALGRMQELI--------KILFESRSFGRIPRCPIFAAGLGMDLCNYFE 282 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--------AQLSRGEMR--------- 318 K + + F + ++L + A P L + E Sbjct: 283 KIRQKSNLIDFDIQMLDRLKIKALDMNFRPGRDLPKKGIYLVSSGMMVEHTPSYKLAASL 342 Query: 319 NVKLAEKDTVIFSSRA-IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH---VSGHPYPN 374 + PG E+ + VH +SGH + Sbjct: 343 LPHPNNGVCFVGYCDPDTPGGELLNTAQGDGFF-FDALDYLAPVNASVHQFDLSGHATRD 401 Query: 375 DLKRMYQWIRPQVLVAIHGE 394 +L + +P+ ++ HGE Sbjct: 402 ELADYAEHCQPRCVILTHGE 421 >gi|332704246|ref|ZP_08424334.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus str. Walvis Bay] gi|332554395|gb|EGJ51439.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus str. Walvis Bay] Length = 535 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 81/580 (13%), Positives = 158/580 (27%), Gaps = 111/580 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LG + + + ++ + +DCG+ + +D D+ Sbjct: 1 MKIKF--LGAARTVTGSCYVLE----ANGRRFAVDCGMHQGNRE---IDKRNEDMQPYA- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YE 112 ++L +I +THAH DH G L L + PVYA+ LL+ Sbjct: 51 -PEDLESILVTHAHIDHSGLLPRLVKTGFNGPVYATVPTRALLDIMLQDSAHIQEMEAEW 109 Query: 113 RVSKKIPC---------------------ISFQAGDKV-DVGAFSIESVRVNHSIPETMA 150 R K + + D V + H + + Sbjct: 110 RNYKNLRRGQPAVEPLYDQADALKAVGLIRPKEYMDWFEPVPGVRARFLDAGHILGSAVI 169 Query: 151 LVIRSPV---GNIVHTGDW-KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + +V +GD + D I E L+ +ST R+ Sbjct: 170 ELFVQEDGKETKLVFSGDLGRPDQLLIQDPSI---------VETADYLLMESTYGNRDHK 220 Query: 207 CI--SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 S + + + I N + ++ I + I + G+ + L Sbjct: 221 DPQKSREELAEAIRYSYANGEKVIIPAFAVERSQEIIYTLFILAKEGKLPADMPIYLDSP 280 Query: 265 VSV----AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-------------- 306 +++ D+ + G +P E + T + E Sbjct: 281 LAIKATEVFKQHPEYLDKETRELINNGEHPLEFPNLRFTQTAQESMALNNLRKPAIIISA 340 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 S +A R + + I + + + V+ Sbjct: 341 SGMANAGRIKHHLRHNLWRKGASIVFTGFQAMGTPGRKIVDGAKKILILGEEVAVNAKVY 400 Query: 367 V----SGHPYPNDLKRMYQWIRPQV--LVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 S H + + R + + +HGE EL V + Sbjct: 401 TIGGFSAHAGQSQMLDWLSNFRNKAMKVFLVHGEAKAQETFAELIRSRLGLEVHIPDYLE 460 Query: 421 MLRLFPDPIEIID-EVVHGLFLKDGFLIGKFADLGIAK-RRQLSFVGHLSVNVLLDNHYN 478 + L P I+ +V D + + R +L Sbjct: 461 DVTLEPGRAPAIEVDVAKARPSVDWDYLLGTTQKLLGDFRSRL---------------GE 505 Query: 479 IFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQF 518 + P I D ++ + LL+ V +++ L Sbjct: 506 VKSKPWI----------DQTELRERLLE-VNQSLMKLNSE 534 >gi|53713580|ref|YP_099572.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis YCH46] gi|60681860|ref|YP_212004.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis NCTC 9343] gi|52216445|dbj|BAD49038.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis YCH46] gi|60493294|emb|CAH08078.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis NCTC 9343] Length = 267 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G+ G+ + + I Sbjct: 1 MKIRFISLASGSSG----NCYYLG----TEKYGILIDAGI--------GIRTIKKSLKDI 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ L L++PVY + G+ ++ + E++ + Sbjct: 45 NVTMDSIRAVFITHDHADHIKAVGHLGEKLNIPVYTTARVHAGINKSYCMTEKLHGSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + + F IES V H + + I D Sbjct: 105 LEKE--EPMLLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|299821106|ref|ZP_07052994.1| metallo-beta-lactamase YycJ [Listeria grayi DSM 20601] gi|299816771|gb|EFI84007.1| metallo-beta-lactamase YycJ [Listeria grayi DSM 20601] Length = 276 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 27/244 (11%) Query: 1 MKNEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 ++ +++ F L G G N L G + I++DCG+S K + Sbjct: 10 IQTDQIRFSILASGSSG----NATLVETG----DQKILVDCGLSGKKIEGL--------F 53 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ +L AI +TH H DH L + +PV+A+ +++ +K Sbjct: 54 EQVGRKMSDLDAILVTHEHVDHIKGLGVIARKYKLPVFANQKTWQAMDSMIGEVNSDQKF 113 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 F G+ +ES V+H E M + S V D + D Sbjct: 114 H---FDMETVKSFGSLQVESFGVSHDAIEPMFYIFHSGDKKFVMITDTGYVSDRMKGHIK 170 Query: 177 VTDKDSLCAIGNEGILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 D + + +L + + + +S + I +++ + + + Sbjct: 171 GADAYLFESNHDIEMLRMGRYPWNVKRRILGDEGHVSNEDAGIAISEVITDKTKRIYLGH 230 Query: 233 FSSS 236 S Sbjct: 231 LSKD 234 >gi|184154495|ref|YP_001842835.1| hypothetical protein LAF_0019 [Lactobacillus fermentum IFO 3956] gi|183225839|dbj|BAG26355.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|299782696|gb|ADJ40694.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 271 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 74/229 (32%), Gaps = 22/229 (9%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N ++ I+ID G+S + + + I + + A+F+TH H Sbjct: 20 GGNATYLE----TAGHRILIDAGLSGKQLEQ--------RMEAIGRSLDQVEALFVTHEH 67 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L +PVYA+ +E K G +D+G +E Sbjct: 68 SDHSHGVGVLARRYGMPVYANAGTWAAVEGKI---GKIAPDQKQLLAPGKFLDLGDLQVE 124 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALM 195 + V+H + I + V D + D D + + +L + Sbjct: 125 AFAVSHDAAQPQFYQIHHDDQSFVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMG 184 Query: 196 CDS-----TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 S G +E+G + I K K L + R Sbjct: 185 PYSWPLKQRILGDTGHLSNEEGAGALMEVIGKRTKRVFLGHRSQHNNMR 233 >gi|326923949|ref|XP_003208195.1| PREDICTED: DNA cross-link repair 1A protein-like [Meleagris gallopavo] Length = 973 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L P+Y + L+++K K+ + Sbjct: 657 AYFLTHFHSDHYCG---LTKNFVFPLYCNKITGNLVKSKLQ----VKEQYINVLPMDTEC 709 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P ++ P G I+HTGD++ D + A+ Sbjct: 710 IVNGIKVLLLDANH-CPGATMILFYLPGGTAILHTGDFRADPSM--------ERYPALIG 760 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDI---MKNAKGCVLVTTFSSSVSRIRSIID 245 + I L D+T E T S++ + + + M LV + S+ + +S + Sbjct: 761 QKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSIGKRKSFLA 820 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IAE +G K + + + I + + P Q+ + Sbjct: 821 IAEVLGSKASMS-RDKYKTLQCLESAAINSLISMNWDGTLLHILPMMQI------NFKGL 873 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + L + S + + S +++ + + + Sbjct: 874 QDHLNKFSENFDQVLAFKPTGWTYSDSCLS-------------VMDIKPQTRGKITIYGI 920 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR QW++PQ ++ Sbjct: 921 PYSEHSSYLEMKRFVQWLKPQKIIPT 946 >gi|54309821|ref|YP_130841.1| hypothetical protein PBPRA2661 [Photobacterium profundum SS9] gi|46914259|emb|CAG21039.1| hypothetical protein PBPRA2661 [Photobacterium profundum SS9] Length = 453 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 40/246 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++IDCG+ + D + DI F ++ + A+ +TH+H DH G + Sbjct: 18 CHEIKLGQHGLLIDCGMFQGDESK---DAL--DIDFPIEH---IHALLLTHSHIDHVGRI 69 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRVY-------------------ERVSKKIPCISFQ 124 L + +YAS LL + K Sbjct: 70 PWLLAAGFKGKIYASEATAALLPLMLADGLKIQLGFNQQQCDQFTLLVKSRLKAIPYDCW 129 Query: 125 AGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A + G I H + ++ S +V +GD + +L D + Sbjct: 130 AQIILPSGELVKIRFRPAGHILGSAYIEIMLSTGEIVVFSGDLGPCNTPLLVDPISPEI- 188 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + L+ +ST + I + + K I + G +L+ FS V R + Sbjct: 189 -------VDTLIIESTYGDQVHHGIERREAQLKEIIERSLIDGGVILIPAFS--VGRTQE 239 Query: 243 IIDIAE 248 ++ E Sbjct: 240 LLFDIE 245 >gi|170078201|ref|YP_001734839.1| metallo-beta-lactamase domain-containing protein [Synechococcus sp. PCC 7002] gi|169885870|gb|ACA99583.1| metallo-beta-lactamase superfamily domain protein [Synechococcus sp. PCC 7002] Length = 553 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 54/404 (13%), Positives = 123/404 (30%), Gaps = 35/404 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH-V 93 +++DCGV D + K A+F +HAH DH + L V Sbjct: 40 LLLDCGVK--------------DFEHFLARDKMPDAVFCSHAHRDHAEGILALHRHFPAV 85 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 P+Y S LL +V ++ + +++ H +P A + Sbjct: 86 PIYLSAATQALLPLNWPGTKVPAELGQVLPWRSPVEIAKNLTLQLFPAGH-LPGAAAALF 144 Query: 154 RSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + +TGD+ + ++ ++ ++L + + +L + Sbjct: 145 TLHTPERDYTVFYTGDFSVSHFQLVNGLS-IEALRGLQPD-VLIIEGSYGTMRHPHRRQQ 202 Query: 210 EKGIKKNIYDIMKNAKGCVLVTT---FSSSVSRIRSIIDIAEQIGRKIVLLG---SSLKR 263 EK + + I D + + +L + ++ I + G Sbjct: 203 EKYLTQRILDALDAGQSVILPVPRLGLGQEILKLLRSHHQFTGKKVDIWVEGQVARGCDL 262 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS---RGEMRNV 320 + + ++ ++ + ++ +A G + + + Sbjct: 263 YLEILPELPNPVQNFARHQALFWDDRVYPRMHRLAPGEYPDLHQGNHVIITDYTNDFAKY 322 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 AE+ + + PG + + ++ H + ++ Sbjct: 323 CEAEECSCLLLLPEHPG----VWLDIEAPPLAAIAPKKHVQIETYLLAEHSDGRNTTQLI 378 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +RPQ +V HG L L + + GK++ L Sbjct: 379 HNLRPQHVVFFHGSSQDLEDLTALEELQSRYQLHCPAAGKLVEL 422 >gi|56478358|ref|YP_159947.1| metallo-beta-lactamase superfamily protein [Aromatoleum aromaticum EbN1] gi|56314401|emb|CAI09046.1| Metallo-beta-lactamase superfamily protein [Aromatoleum aromaticum EbN1] Length = 469 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 67/451 (14%), Positives = 136/451 (30%), Gaps = 74/451 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G GE+ + A + ++DCG+ D +L D + + Sbjct: 1 MDLTFF--GAAGEVTGSCARVHHAGG----MFLVDCGMFQGGRDATRKNLQALDFD-LRE 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVYE 112 + + +THAH DH G + L S +YA+ + L ++ K Sbjct: 54 ----VDFVILTHAHLDHSGLVPRLVSLGYRGKIYATAATVDLLGVMLLDSAHIQEKEAEW 109 Query: 113 RVSKKIPCISFQAGDKVDVGAFS------IESVRVNHS---IPETMALVIRSPVGNIVHT 163 V + + +V + +P + G+I+ + Sbjct: 110 AVRNNRRKNVRHGWSTAPLYTVNQALESLASLHKVAYDEEIVPHSAVRCRFRDAGHILGS 169 Query: 164 GDWKLD-----DDAILGDVTDKDS-LCAIGNEGI-----LALMCDSTNAMREGTC--ISE 210 ++D L D + + + + L +ST R +E Sbjct: 170 AIIEIDVETAGTSRRLVFSGDLGRPMRPVLRDPVKILRADYLCIESTYGNRSHRPIEATE 229 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSSLKRV 264 + + D ++ +G V++ F+ V R + +I + +I R V++ S + Sbjct: 230 SELVHVLRDTLEQRRGNVIIPAFA--VGRTQEVIFVLADLVRAGKIPRLEVVVDSPMASA 287 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR---------- 314 V+ D+ S + E++ V + + AQ S Sbjct: 288 VTKLTLQYDELWDEETRSLLVWIRAHPERISVRFVQDVEDSIALNAQASGLVIISASGMC 347 Query: 315 -----GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-- 367 + + I + + + + + + +H Sbjct: 348 EAGRIRHHLKYNVGRSECSIVICGFQAAGTLG-RRLVDGVRTITLFGESIAVRAQIHTIG 406 Query: 368 --SGHPYPNDLKRMYQWIR--PQVLVAIHGE 394 S H L I P+ +HGE Sbjct: 407 GLSAHADQPGLLEWLGHIEEAPRRTFVVHGE 437 >gi|116051611|ref|YP_789550.1| hypothetical protein PA14_17570 [Pseudomonas aeruginosa UCBPP-PA14] gi|313108972|ref|ZP_07794947.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa 39016] gi|115586832|gb|ABJ12847.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310881449|gb|EFQ40043.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa 39016] Length = 467 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 72/486 (14%), Positives = 137/486 (28%), Gaps = 97/486 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLM 69 LG E+ + L ++++CG+ + + G FP ++ Sbjct: 7 LGAAQEVTGSCYLLETLDGVK---VLLECGMRQGRREADNGNRAPFP-FD-----PASID 57 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERVSK 116 A+ I+HAH DH G L L + P++A+ LLE R Sbjct: 58 AVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSAHIQEKDAEWENRWRN 117 Query: 117 KIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMALVIRSP 156 +I S + + +G + H I + + ++ Sbjct: 118 RIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFHNAGH-ILGSSIVEVQFH 176 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 +V +GD ++ + +M +ST R+ +E Sbjct: 177 DQVQPRRLVFSGDLGNTCSPLMRAPSPLSR--------ADVVMLESTYGDRDHRDSNETL 228 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 I + G VL+ +F+ V R + ++ + G ++ V + + Sbjct: 229 EELAAILEQAHRDGGNVLIPSFA--VGRTQDLLYYLGRF----YQEGRLPQQAVFLDSPM 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--AQLSRGEMRNVKLAEKDTVI 329 F RE + T E L + + M ++ +I Sbjct: 283 AARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINRIKSGAVII 342 Query: 330 FSSRAIPGNEVAIG-------------------------HIKNRLVEQGVRVIAEDAECP 364 S G + +I + V + Sbjct: 343 AGSGMCTGGRIVHHFKHNLWRPECHVVFPGFQARGTLGRNIVDGASAVRVFHQRIAVKAQ 402 Query: 365 VHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H S H + L RP L IHGE + A + + Sbjct: 403 IHTLGGFSAHAGQSQLLDWVAHFAHRP-ALYLIHGEREKMEALRGAIRERLDWDAEIPEP 461 Query: 419 GKMLRL 424 G+ + + Sbjct: 462 GERIEI 467 >gi|331268257|ref|YP_004394749.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329124807|gb|AEB74752.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 262 Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 11/141 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S I+ID G+ PG + + I K + IF+TH H DH + L Sbjct: 17 VSSGNSSILIDAGL-------PG-KHIEKALESINKNPNEIDGIFVTHEHIDHVKGVGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ ++ K+ V + I + ++H + Sbjct: 69 SRRYNIPIYANDLTW---KSMLKNIGKIKEENIKIICKNKSVTIKNMDICNYSISHDAID 125 Query: 148 TMALVIRSPVGNIVHTGDWKL 168 + I + + D Sbjct: 126 PVGYSIYAGKKKVCIATDLGY 146 >gi|221059687|ref|XP_002260489.1| cleavage and polyadenylation specifity protein [Plasmodium knowlesi strain H] gi|193810562|emb|CAQ41756.1| cleavage and polyadenylation specifity protein,putative [Plasmodium knowlesi strain H] Length = 938 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + LGG E+G + + S+ + IM+DCG+ G+ P Sbjct: 2 NNINIVCLGGASEVGRSCVIIE----SANRSIMLDCGI---HPAFMGI-GCLPIYD--AY 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH H DH GAL L + VY + + +K + Sbjct: 52 DISKVDLCLITHFHMDHSGALPYLINRTRFKGKVYMTEATKSICYLLWNDYARIEKCMHM 111 Query: 122 SFQA 125 + Sbjct: 112 MNKM 115 >gi|332654567|ref|ZP_08420310.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] gi|332516531|gb|EGJ46137.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] Length = 274 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 67/210 (31%), Gaps = 39/210 (18%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDIT 59 L F+ L G G N AL G I++D G+S + GVD Sbjct: 2 LSFVTLASGSSG----NAALVSCGQTH----ILLDAGISARRITTALRGLGVD------- 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L + ITH H DH L L L +PVYA+ + L K + +K Sbjct: 47 -----PASLSGVLITHEHTDHISGLATLTKQLGLPVYATAPTLDALAMKV--PAIPEKRL 99 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 F G+ +G IE +H ++ I +V D Sbjct: 100 GRFFAPGESFPLGELWIEPFATSHDAACSVGYAITGGDSRMVLCTDLGY----------- 148 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCIS 209 G L+C++ + Sbjct: 149 ISPQVERAVAGCDLLVCEANHDEEWVRTGP 178 >gi|262276306|ref|ZP_06054115.1| metallo-beta-lactamase family protein RNA-specific [Grimontia hollisae CIP 101886] gi|262220114|gb|EEY71430.1| metallo-beta-lactamase family protein RNA-specific [Grimontia hollisae CIP 101886] Length = 451 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 83/247 (33%), Gaps = 41/247 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++IDCG+ F D++ +++ D +++ A+ +THAH DH G L Sbjct: 16 CHQLTTENGKLLIDCGL-FQGDEVRALEI---DFD-----VQDIDALILTHAHIDHIGRL 66 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCISFQAGDKVDVGAF 134 L + P+Y + L+ + ++I + V G + Sbjct: 67 PWLLAAGFTSPIYCTSATASLVPLMLDDALRLQLGLNHKERQRILRLIQSLIVPVHYGTW 126 Query: 135 S-----------IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 I H + V +V +GD +L D + Sbjct: 127 HSIKRQSHPVADIRFQPAGHILGSAYVEVTLPTGERLVFSGDLGPSHTPLLPDPVSPER- 185 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L+ +ST I + + K + + G +L+ FS V R + Sbjct: 186 -------ADILVIESTYGDGIHESIEARAQRLKALINRSLLDGGVILIPAFS--VGRTQE 236 Query: 243 IIDIAEQ 249 ++ E Sbjct: 237 LLFDIEA 243 >gi|291279802|ref|YP_003496637.1| metallo-beta-lactamase family protein [Deferribacter desulfuricans SSM1] gi|290754504|dbj|BAI80881.1| metallo-beta-lactamase family protein [Deferribacter desulfuricans SSM1] Length = 208 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 21/182 (11%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 + + Y ++ I+ID G F K +FI +AI TH H DH Sbjct: 11 LYVNCYIISKNKDAIIIDPGSDFEKIK-----------SFIDSNGLKPLAIVNTHGHFDH 59 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGAF 134 GA+ DL S ++P+Y LL+ + + +D G Sbjct: 60 VGAIEDLKSEYNIPLYMHEGDEFLLKNAVEHASMFGIFGIKSSNIDNYLEDNQLLDFGDI 119 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 ++ + P ++L + +V TGD +K D ++L + Sbjct: 120 KLKVLHTPGHSPGGVSLYL--GEAKVVFTGDTLFKDSVGRTDFPYADFNTLANSIKNKLY 177 Query: 193 AL 194 L Sbjct: 178 VL 179 >gi|304436958|ref|ZP_07396921.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369909|gb|EFM23571.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 536 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 75/521 (14%), Positives = 143/521 (27%), Gaps = 102/521 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L G ++DCG+ L + + + A Sbjct: 6 LGAAHVVTGSCFLIHTG----DHKYLVDCGMYQGTRRLREM-----NYEPFPFNPAEIDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI----------- 118 +F+THAH DH G + L VYA+ L+ ++ Sbjct: 57 VFLTHAHIDHCGRIPRLVREGFVGRVYATRATCDLVHIMLPDSAHIQESDAEMLNRKNAR 116 Query: 119 --------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 VD+G S+ H I + L I G Sbjct: 117 RSEAPITPLYTQADVFAALEHFTPVPYQGTVDLGPVSVTFRDAGH-ILGSAILEIVVREG 175 Query: 159 N----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD IL D + + G L+ +ST R ++ Sbjct: 176 MQESKLVFSGDLGQPHQPILR---DPEPIV-----GADFLIVESTYGDRIHRDYDKETAL 227 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + + G V++ +F+ V R ++++ + G I + Sbjct: 228 LEVIRDTMDRGGNVIIPSFA--VGRTQTLLY----YFYNLWKEGR--LDDDIPIIIDSPL 279 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNVKLAEKDTVIFSS 332 + +++ + E + + +++ E R + AE +I S+ Sbjct: 280 AIQATRVFLKNYEEFDEETIAFFGHEGMIPAFPQV-RIAETAAESRALNSAEGSAIILSA 338 Query: 333 RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP---------------------------- 364 + + H+K+ L V+ + Sbjct: 339 SGMADAGRVLHHLKHNLWRPESTVLFVGYQAEGSLGRRLVDGIKRVRVLGEEIAVKAKIE 398 Query: 365 --VHVSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 S H + + RP + +HGE A KE +E V G Sbjct: 399 VLDGFSAHADAAQTVEWMRAVTAPRPAKVFLVHGEGQAQEALKERIQEELGLEVYAPFLG 458 Query: 420 KMLRLFPDPI----EIIDEVVHGLFLKDGFLIGKFADLGIA 456 ++ + V ++D + Sbjct: 459 DLVTIQGRSAVLIPSNSPAVSIEAEMEDALRDFDAEYRLLR 499 >gi|325970984|ref|YP_004247175.1| beta-lactamase [Spirochaeta sp. Buddy] gi|324026222|gb|ADY12981.1| beta-lactamase domain protein [Spirochaeta sp. Buddy] Length = 559 Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 15/160 (9%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD-LPGVDLVFPDITFIMKERK 66 G ++ + L + K++++DCG+ D+ G+DL F Sbjct: 3 ITFFGAAQQVTGSCTLVE----VNGKYLLVDCGLPQGNDEREVGMDLPF--------RAD 50 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + +F+THAH DH G + L ++A+ L + +++ +++ Sbjct: 51 AIDYVFLTHAHIDHTGRIPLLVKEGFKGKIFATSATAQLCDIMLADSGHIQEMEA-EWKS 109 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G +E + M I + Sbjct: 110 RKAIRAGKKGVEPLYTVQDAQNAMQFFESCVYEEICEIDE 149 >gi|225155848|ref|ZP_03724334.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] gi|224803398|gb|EEG21635.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] Length = 452 Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 130/435 (29%), Gaps = 72/435 (16%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV--DLVFPDITFIMKERKNLMAI 71 G IG N L G + ++ID G+ P + PD + + I Sbjct: 9 QGGIGANCTLLQIGDIN----LVIDSGL------HPKIAGRQAVPDFAKL--RNLEIDLI 56 Query: 72 FITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKR----------VYERVSKKIPC 120 +TH H DH G+L L PV S + L+E E + P Sbjct: 57 LVTHCHLDHIGSLPVLMREHPRPPVMMSTASQMLVERMLHNSANVMKRQKEEDNIPEYPL 116 Query: 121 ISFQAGDK-------VDVGA----------FSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + D+ + G I H + + IR +I T Sbjct: 117 FTHEDIDRLAPRFTGIPFGHPKKFRPHKDEIEITLHHAGH-VAGAAGIEIRHKHRHIFIT 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-----IKKNIY 218 GD DD L ++ ++T E E+ + I Sbjct: 176 GDVLFDDQRTLKG-------AHFPAGHFDTVIMETTRGSTERAPGKERVHEVARLVDCIN 228 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL------LGSSLKRVV-SVAIDV 271 D ++ ++ + I SI+ A + GR + LG L + Sbjct: 229 DTIQRGGSFLIPAFALGRMQEILSILCDARKFGRLVECPIFASGLGLDLADYFDQITRKT 288 Query: 272 GIIKKDQLFLSDESFGLYPRE--------QLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + ++ L D PR Q + GS + + M Sbjct: 289 KALNFNRSVLKDLKLKPAPRNLKPGEDPQQKAIYVLGSGMLVENTPSYTLASGMVGHARN 348 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED--AECPVHVSGHPYPNDLKRMYQ 381 V F PG ++ + + + V A+ +SGH ++L + Sbjct: 349 TVAFVGFCDPDTPGGQLLKSAPGDSFLFKTAHVKAKIKARIERFELSGHADRDELLQFAV 408 Query: 382 WIRPQVLVAIHGEPL 396 + LV HG+P Sbjct: 409 QTSARSLVLTHGDPE 423 >gi|257083396|ref|ZP_05577757.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257417072|ref|ZP_05594066.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|256991426|gb|EEU78728.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257158900|gb|EEU88860.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length = 429 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 131/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L + + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLANKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|82704800|ref|XP_726704.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23482224|gb|EAA18269.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 954 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 78/527 (14%), Positives = 153/527 (29%), Gaps = 125/527 (23%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---------------VSFPKD 46 + LG +G + + + IM DCG + Sbjct: 6 NQTTVYIKVLGAGQTVGRSCVIVE----LENRRIMFDCGSHVGYKDERKYPNFNLLVGNS 61 Query: 47 DLPG------------------VDLVFPDITFIMKERKNL----MAIFITHAHEDHYGAL 84 ++ G V+ D ++ K + + I+H H DH GAL Sbjct: 62 NMEGAPKIDEENNLNVEVNISIVNSNISDKEKLINNLKKINEIIDCVIISHFHMDHIGAL 121 Query: 85 HDLWS--FLHVPVYASPFAIGL-------------LE---------AKRVYER----VSK 116 + S L ++ K + E+ ++ Sbjct: 122 PFFTEILQYKGTIIMSYPTKALSPVLLLDGCKISDIKWEKKNLEKQIKMLNEKSDDLLNY 181 Query: 117 KIPCISFQAG--------------------DKVDVGAFSIESVRVNHSIPETMALVIRSP 156 I CI + ++G SI H + + Sbjct: 182 NINCIKKDPWNITEENIYNCINKVVGLQVNETYELGDISITPYYAGH-VLGACMYRLEVN 240 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIK 214 ++++TGD+ D LG I + +ST A R SE + Sbjct: 241 NISVIYTGDYNTIPDKHLGS-------TKIPVLTPEIFISESTYASYVRPTRKSSELELC 293 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSI------------IDIAEQIGRKIVLLGSSLK 262 N+ + + G VL+ F+ + R + + I+ G + + Sbjct: 294 -NLVNECVHKGGKVLIPVFA--IGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYY 350 Query: 263 RVVSVAIDVGIIKKDQLFLSDESF-----GLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 ++ S I + + L D S Y E ++ + G + LA + Sbjct: 351 KIYSSWISNNCVSTEVKNLFDFSNISQFSNNYLNENRPMVLFATPGMLHTGLALKA---F 407 Query: 318 RNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +I + G I K L++ V + S H N Sbjct: 408 KAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGNTYVYVNCKIIYLSFSAHADSNG 467 Query: 376 LKRMYQWIRPQVLVAIHGEPL-HLVAHKELALQEGIACVPPVRNGKM 421 ++++ + + P+ ++ +HG+ K ++ Q I + P Sbjct: 468 IQQLIKHVMPKNVIFVHGDKNGMEKLSKHISNQYHINSICPYMGQNC 514 >gi|295084268|emb|CBK65791.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Bacteroides xylanisolvens XB1A] Length = 267 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKTLKDYNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ +L L++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGNLGEKLNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + + F IES V H + + I D Sbjct: 105 LEKQ--EPMTLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|297538678|ref|YP_003674447.1| RNA-metabolising metallo-beta-lactamase [Methylotenera sp. 301] gi|297258025|gb|ADI29870.1| RNA-metabolising metallo-beta-lactamase [Methylotenera sp. 301] Length = 457 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 69/470 (14%), Positives = 132/470 (28%), Gaps = 77/470 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LG G + + L + + + I++DCG+ F + + Sbjct: 1 MELTF--LGATGTVTGSKYLLTCETDNGTRRILVDCGL-FQGLKQL----RLKNWAALPI 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK 116 K++ + +THAH DH G L VY + L + A E Sbjct: 54 NPKDVDVVVLTHAHIDHTGYLPLFVKNGFSGKVYCTEATRDLCDILLPDSAHLQEEEADY 113 Query: 117 KIPC------------------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMAL 151 ++ VD+G ++ H I + + Sbjct: 114 ANRRGFSKHKPALPLYTKEDADNALELLVAVDFEQTVDLGDGLTLTFTPNGH-ILGSAFV 172 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I+ +IV +GD D + + L+ +ST R K Sbjct: 173 RIQYKKTSIVFSGDIG--------RPNDILMKPPVRLKQADYLVLESTYGNRLHEHDDPK 224 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + + KG VL+ F+ V R + ++ + + + ++ + V Sbjct: 225 VKLAAVINKTVKRKGVVLIPVFA--VGRAQELLYYIHLLKVS-GAISKDIPVYLNSPMAV 281 Query: 272 GIIKKDQLF-----LSDESFGLYPREQLIVIATGSQGEPR-----------SALAQLSRG 315 LS + +V + S +A R Sbjct: 282 DATAIFSHHSGEHRLSPDQCSALSHTANMVNSVEESKRLNETKGPMIILSASGMASGGRV 341 Query: 316 EMRN--VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSG 369 +T++F G + + + V ++S Sbjct: 342 VHHLKAFAPKPNNTILFVGFQAAG--TRGSAMLDGAESIKIHGEYVPVRADVELISNLSA 399 Query: 370 HPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 H +++ P+ HGEP+ A + ++ V Sbjct: 400 HAEYSEIIDWLGGFESPPKKTFITHGEPVAADAMRLHIEEQLHWSVEVPE 449 >gi|259047880|ref|ZP_05738281.1| metallo-beta-lactamase superfamily protein VicX [Granulicatella adiacens ATCC 49175] gi|259035557|gb|EEW36812.1| metallo-beta-lactamase superfamily protein VicX [Granulicatella adiacens ATCC 49175] Length = 267 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 19/164 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N + ++ +++DCG++ + + I + Sbjct: 7 KVSLLASGSSG----NATYIE----TPKQKLLVDCGLT--------GKAISAQMEKINRS 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ AI +TH H DH + L +P+YA+ + K + ++ + Sbjct: 51 ISDIDAILVTHEHSDHIKGIGVLARKYGIPIYANEKTWAAMSGKIGKVALEQQEIFNT-- 108 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G+ + G + S V+H + V D Sbjct: 109 -GETLTFGDIDVMSFAVSHDAAAPQFYSFQKDQRQFVMLTDTGY 151 >gi|291404840|ref|XP_002718800.1| PREDICTED: DNA cross-link repair 1A isoform 2 [Oryctolagus cuniculus] Length = 1028 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 111/329 (33%), Gaps = 47/329 (14%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY + LL+ K ++ + + Sbjct: 715 AYFLTHFHSDHYAG---LSKNSTFPVYCTEITGNLLKNKL----HVQEQYIHTLPMDTEC 767 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIV-HTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P ++ P G ++ HTGD++ + + Sbjct: 768 VVNGVKVVLLDANH-CPGAAMILFHLPNGTVMLHTGDFRANPSMER---------SLLAG 817 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 818 QKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLA 877 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 878 IADVLGSKV---GMSQEKYKTL-----------RCLNIPEINSLITTDMC----NSLVHL 919 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + ++L + + Sbjct: 920 LPMMQINFKGLQSHLKKFGGKYDEILAFRPTGWTHS-----DKLTTMADVIPQTKGNISI 974 Query: 366 H---VSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++KR QW++PQ ++ Sbjct: 975 YGIPYSEHSSFLEMKRFVQWLKPQKIIPT 1003 >gi|291404838|ref|XP_002718799.1| PREDICTED: DNA cross-link repair 1A isoform 1 [Oryctolagus cuniculus] Length = 1043 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 111/329 (33%), Gaps = 47/329 (14%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY + LL+ K ++ + + Sbjct: 730 AYFLTHFHSDHYAG---LSKNSTFPVYCTEITGNLLKNKL----HVQEQYIHTLPMDTEC 782 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIV-HTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + NH P ++ P G ++ HTGD++ + + Sbjct: 783 VVNGVKVVLLDANH-CPGAAMILFHLPNGTVMLHTGDFRANPSMER---------SLLAG 832 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + + L D+T E T S++ + + + A LV + S+ + + + Sbjct: 833 QKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLA 892 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IA+ +G K+ G S ++ ++ L+ + S Sbjct: 893 IADVLGSKV---GMSQEKYKTL-----------RCLNIPEINSLITTDMC----NSLVHL 934 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + +G ++K + G + ++L + + Sbjct: 935 LPMMQINFKGLQSHLKKFGGKYDEILAFRPTGWTHS-----DKLTTMADVIPQTKGNISI 989 Query: 366 H---VSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++KR QW++PQ ++ Sbjct: 990 YGIPYSEHSSFLEMKRFVQWLKPQKIIPT 1018 >gi|237713258|ref|ZP_04543739.1| metallo-beta-lactamase hydrolase [Bacteroides sp. D1] gi|262406601|ref|ZP_06083150.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647078|ref|ZP_06724687.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294808115|ref|ZP_06766887.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|298484418|ref|ZP_07002576.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. D22] gi|229446725|gb|EEO52516.1| metallo-beta-lactamase hydrolase [Bacteroides sp. D1] gi|262355304|gb|EEZ04395.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292637575|gb|EFF55984.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294444683|gb|EFG13378.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|298269442|gb|EFI11045.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. D22] Length = 267 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKTLKDYNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ +L L++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGNLGEKLNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + + F IES V H + + I D Sbjct: 105 LEKQ--EPMTLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|315151684|gb|EFT95700.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 429 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 131/343 (38%), Gaps = 43/343 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETL--- 201 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCIS-------EKGIKKNIYDI-MKNAKGCVLVTT 232 + C L +M + + E E+ + +++ + ++N + Sbjct: 202 -AFCEKAKHTELLMMEGVSISFPEREPDPAQVAVVSEEDLVQHLVRLELENPNRQITFNG 260 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPR 291 + ++V R II+ + R +VL + ++ V I+V + + + + L Sbjct: 261 YPANVERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIP 317 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLV 350 ++ + L Q+ L E I S ++ + + + L Sbjct: 318 YDTLL------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLA 368 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 ++ + + + SGH P DL ++ I PQVLV IH Sbjct: 369 KKDITFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|15219728|ref|NP_176845.1| ATP dependent DNA ligase family protein [Arabidopsis thaliana] gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana] Length = 1417 Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 128/411 (31%), Gaps = 44/411 (10%) Query: 55 FPDITFIMK-----ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 P+ FI+ + + +A F++H H DHY L WS + +Y S L+ Sbjct: 60 IPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSK-GI-IYCSHKTARLVAEIL 117 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-----VGNIVHTG 164 + V + + + NH P + + + VHTG Sbjct: 118 Q----VPSQFVFALPMNQMVKIDGSEVVLIEANH-CPGAVQFLFKVKLESSGFEKYVHTG 172 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKN 223 D++ D +G +G+ D+T + S E+ + + I K Sbjct: 173 DFRF----CDEMRFDPFLNGFVGCDGVFL---DTTYCNPKFVFPSQEESVGYVVSVIDKI 225 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIKKDQLFLS 282 ++ VL + V + + +++IA + RKIV+ + + V + G+ +D+ Sbjct: 226 SEEKVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGMFTEDENESD 285 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 G + P + E + + + + G + Sbjct: 286 VHVVGWNVLGETW---------PYFRPNFVKMNE---IMVEKGYDKVVGFVPT-GWTYEV 332 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + VR V S H ++L+ ++++P+ ++ G + K Sbjct: 333 KR-----NKFAVRFKDSMEIHLVPYSEHSNYDELREFIKFLKPKRVIPTVGVDIEKFDCK 387 Query: 403 ELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADL 453 E+ + + + + + Sbjct: 388 EVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQKNEKSDVDVVSHSAEVYEE 438 >gi|289209067|ref|YP_003461133.1| RNA-metabolising metallo-beta-lactamase [Thioalkalivibrio sp. K90mix] gi|288944698|gb|ADC72397.1| RNA-metabolising metallo-beta-lactamase [Thioalkalivibrio sp. K90mix] Length = 466 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 96/342 (28%), Gaps = 75/342 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G GE+ + L + I+++CG+ + D + + + + + A+ Sbjct: 8 GATGEVTGSRYLLE----TDDARILLECGLHQGNSE---ADE--ANRASLTELAETINAV 58 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE--------RVSKKIPCIS 122 ++H H DH G L L P+Y +P LLE K + Sbjct: 59 ILSHGHLDHSGLLPKLVRDGYRGPIYCTPGTEELLEIMLEDAAFVMSKDIEWENKWRRRA 118 Query: 123 FQA------------------------GDKVDVGAFSIESVRVNHSIPETMALVIR---S 155 + G + H + + +I Sbjct: 119 DKPLLEPIYDIDDVATTLGLCRAIPYGDTHTIAGDVRLTFRDAGHILGSAIVDLIVPSGG 178 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK- 214 ++V +GD D ++ T E ++ +ST R+ + E + Sbjct: 179 RDRHLVFSGDLGNADAVLMHAPT--------RPEHADHVLLESTYGNRDHRPMDETVEEF 230 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + + G VL+ F+ V R + I+ S+ + Sbjct: 231 AQVLAEADKSGGNVLIPAFA--VGRTQEILYHL------------SMLHHAGRLPQQKVF 276 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 + + + E L Q + G+ Sbjct: 277 LDSPMAIKVTEL-------YARLRRTLDPEDMDRLHQAANGD 311 >gi|257420596|ref|ZP_05597586.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|257162420|gb|EEU92380.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|315156385|gb|EFU00402.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 131/343 (38%), Gaps = 43/343 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETL--- 201 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCIS-------EKGIKKNIYDI-MKNAKGCVLVTT 232 + C L +M + + E E+ + +++ + ++N + Sbjct: 202 -AFCEKAKHTELLMMEGVSISFPEREPDPAQVAVVSEEDLVQHLVRLELENPNRQITFNG 260 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPR 291 + ++V R II+ + R +VL + ++ V I+V + + + + L Sbjct: 261 YPANVERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIP 317 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLV 350 ++ + L Q+ L E I S ++ + + + L Sbjct: 318 YDTLL------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLA 368 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 ++ + + + SGH P DL ++ I PQVLV IH Sbjct: 369 KKDITFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|310639606|ref|YP_003944364.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309244556|gb|ADO54123.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 460 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 92/272 (33%), Gaps = 42/272 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L GG GE G + ++ + IM+DCGV + G +FP ++ Sbjct: 4 KLRI--WGGAGEHGRSCYVFE----GKQHRIMLDCGVK---KEGIGQYPIFP-----PQK 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER---------- 113 K L + ++HAHEDH AL L+ + V+ + L + + Sbjct: 50 VKELTTVLLSHAHEDHSMALPLLYKYGYRGEVWTTKATAEQLGSYFRSWQTYVESRGGEL 109 Query: 114 --VSKKIPCISFQAGD--------KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + I I+++ + + R H + + +I + + Sbjct: 110 PYSEQDIQSITYRYLEDGAPSGVWCEACPGVRMMWGRSGH-LAGAVWYIIEMEGKRLFFS 168 Query: 164 GDWKLDDDAILGDVTDK------DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 GD+ + + + D D + L + L + NA +++ Sbjct: 169 GDYSRESELLAADAPDLCMGEGINDLPECKPQSYLVDISIMDNAYGMDIDPQPVKLERLR 228 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ + V + R + +I A + Sbjct: 229 VEMEQILWSGGHVLLPVPAFGRGQELIVWASE 260 >gi|307299106|ref|ZP_07578908.1| RNA-metabolising metallo-beta-lactamase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915531|gb|EFN45916.1| RNA-metabolising metallo-beta-lactamase [Thermotogales bacterium mesG1.Ag.4.2] Length = 443 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 66/468 (14%), Positives = 153/468 (32%), Gaps = 77/468 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDITFIM 62 + PLGG EIG N L K I+ID G V + LP +D + Sbjct: 1 MTLTPLGGGREIGANSYLL----SLDGKNILIDAGRHPVKEGYESLPEIDKI-------- 48 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL-----------LEAKRV 110 +L I I+H+H DH +L + + P+ + GL ++ K Sbjct: 49 ---NDLDVIMISHSHYDHLSSLPYISQRWPNAPILMAQENKGLALRILQNSVEVMKKKNA 105 Query: 111 YERVSK-----------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 + V K + + + ++ + ++ + Sbjct: 106 KDGVEPILYNHGEVNELKRRIYPMEYFQRYSIDDVVDVALYPAGHVMGAASIFLEHRGRR 165 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-KGIKKNIY 218 I+++GD L + + + + L+ + T +E ++ I++ Sbjct: 166 ILYSGDISLSQQLTIPP-------AQLPKK-VETLISEGTYGAKENQLLTRYSEIERLSK 217 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIA-----EQIGRKIVLLGSSLKRVVSVAIDVGI 273 + + + + ++ R + I + ++ + + + + +S Sbjct: 218 SVKRVLENGGRILMPVFALGRGQEAIYMLLMLMEKKKIPSVPIYTNGMVASLSSLYMSNY 277 Query: 274 I----KKDQLFLSDESFG-LYPREQLIVIATGSQGEPRSALAQLSRGE------MRNVKL 322 K + F+ + + + + A + + + + Sbjct: 278 ESISEKDRKWFIKSFQNNVTVAPKSIERLLFSREPALFVFSAGMLVEDTLSYIFAKQMLP 337 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIK--NRLVEQGVRVIAEDAECP------VHVSGHPYPN 374 KD + F P E I N+ ++ +++ + E + SGH Sbjct: 338 NSKDAIFFMGYQSP--ESDGYKILQANKNGDERIQMGDDSIEIGTKNIDIFNFSGHADYQ 395 Query: 375 DLKRMYQWIRPQVLVAIHG-EPLHLVAHKELALQEGIACVPPVRNGKM 421 +L + + ++P+ L+ +HG E +EL + I ++ ++ Sbjct: 396 ELLDLPRRLQPEKLIYVHGDEAALENLAEELQYEFEIQIPSNLQTVEL 443 >gi|256822842|ref|YP_003146805.1| beta-lactamase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796381|gb|ACV27037.1| beta-lactamase domain protein [Kangiella koreensis DSM 16069] Length = 269 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 21/167 (12%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 N L LG G G N L G +M+DCG + V V + + Sbjct: 3 NNSTLKVASLG-SGSKG-NATLVSNGEV----IVMVDCGFT--------VKEVLKRLPRL 48 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 E + I +TH H+DH + L +PV+++ + LL K ++ I Sbjct: 49 NIEPDQIDGILVTHEHQDHISGVGALSRRFSIPVWSTRGS--LLSGKC---GNLPELNLI 103 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +G+ + + V H E + + D Sbjct: 104 EG--FQPFSIGSLDVTPLSVPHDAREPCQFLFTQDELRLAILTDLGC 148 >gi|227518229|ref|ZP_03948278.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|229547577|ref|ZP_04436302.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255974441|ref|ZP_05425027.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256761241|ref|ZP_05501821.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256852504|ref|ZP_05557880.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|257080722|ref|ZP_05575083.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|307278535|ref|ZP_07559607.1| hypothetical protein HMPREF9515_00861 [Enterococcus faecalis TX0860] gi|307287401|ref|ZP_07567460.1| hypothetical protein HMPREF9505_00878 [Enterococcus faecalis TX0109] gi|312900380|ref|ZP_07759690.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|227074325|gb|EEI12288.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|229307267|gb|EEN73254.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255967313|gb|EET97935.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256682492|gb|EEU22187.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256712358|gb|EEU27390.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256988752|gb|EEU76054.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|295114281|emb|CBL32918.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Enterococcus sp. 7L76] gi|306501574|gb|EFM70870.1| hypothetical protein HMPREF9505_00878 [Enterococcus faecalis TX0109] gi|306504772|gb|EFM73970.1| hypothetical protein HMPREF9515_00861 [Enterococcus faecalis TX0860] gi|311292470|gb|EFQ71026.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315030858|gb|EFT42790.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315171799|gb|EFU15816.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|323478869|gb|ADX78308.1| hydrolase of the metallo-beta-lactamase superfamily [Enterococcus faecalis 62] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPVQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|138897040|ref|YP_001127493.1| hypothetical protein GTNG_3411 [Geobacillus thermodenitrificans NG80-2] gi|196249861|ref|ZP_03148557.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|134268553|gb|ABO68748.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] gi|196210737|gb|EDY05500.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 264 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 70/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + + +++D G+S + + I + K L A+ +TH H DH L Sbjct: 17 FYIETDSQRLLVDAGLSGKQLEQL--------FAEIGRHPKQLDALLVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +PVYA+ A F G G +ES V+H Sbjct: 69 VLARKYRLPVYANEKTW---RAMEQAIGDIPTEQKFVFPLGTVKTFGDVDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + + + D L + + G+L + Sbjct: 126 AEPMFYVFHYGEKKLALLTDTGYVSERMKKTIENADVFVLESNHDVGMLRMGRYPWNVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + IS + + D++ + + S Sbjct: 186 RILSDVGHISNEEAGLVLADVIGERTKQIYLAHLSQD 222 >gi|313611037|gb|EFR85925.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL F2-208] Length = 149 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 F G+ +ES V+H E M + Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHK 147 >gi|229548216|ref|ZP_04436941.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255970866|ref|ZP_05421452.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256958140|ref|ZP_05562311.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|257091125|ref|ZP_05585486.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|300860766|ref|ZP_07106853.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|307275131|ref|ZP_07556285.1| hypothetical protein HMPREF9521_00736 [Enterococcus faecalis TX2134] gi|312902930|ref|ZP_07762127.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312952174|ref|ZP_07771052.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229306695|gb|EEN72691.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255961884|gb|EET94360.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256948636|gb|EEU65268.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256999937|gb|EEU86457.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|300849805|gb|EFK77555.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|306508249|gb|EFM77365.1| hypothetical protein HMPREF9521_00736 [Enterococcus faecalis TX2134] gi|310629830|gb|EFQ13113.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310633702|gb|EFQ16985.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|315037225|gb|EFT49157.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315154497|gb|EFT98513.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315160124|gb|EFU04141.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315163257|gb|EFU07274.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315169347|gb|EFU13364.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315578897|gb|EFU91088.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|327536057|gb|AEA94891.1| hypothetical protein OG1RF_12204 [Enterococcus faecalis OG1RF] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|29377368|ref|NP_816522.1| hypothetical protein EF2904 [Enterococcus faecalis V583] gi|227554350|ref|ZP_03984397.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|257417786|ref|ZP_05594780.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|307290838|ref|ZP_07570732.1| hypothetical protein HMPREF9509_01137 [Enterococcus faecalis TX0411] gi|82407946|pdb|2AZ4|A Chain A, Crystal Structure Of A Protein Of Unknown Function From Enterococcus Faecalis V583 gi|82407947|pdb|2AZ4|B Chain B, Crystal Structure Of A Protein Of Unknown Function From Enterococcus Faecalis V583 gi|29344835|gb|AAO82592.1| hypothetical protein EF_2904 [Enterococcus faecalis V583] gi|227176527|gb|EEI57499.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|257159614|gb|EEU89574.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|306498147|gb|EFM67670.1| hypothetical protein HMPREF9509_01137 [Enterococcus faecalis TX0411] gi|315576374|gb|EFU88565.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315580893|gb|EFU93084.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|330721527|gb|EGG99565.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC2047] Length = 257 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 21/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L ++ +++DCG + + + + + K Sbjct: 1 MRFASLG-SGSKG-NATLIE----AADTCLLLDCGFTVKETE--------ARLQRLGKTG 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L AI +TH H DH + L +PVY + R+ K + Sbjct: 47 HDLNAILVTHEHSDHIKGVGALARKYQLPVYLTAGT-------FHRGRLGKLPRLETINC 99 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ V V H E V + + D Sbjct: 100 HQHFVIDNVHVQPVPVPHDAREPCQYVFQYNQKKLGVLTD 139 >gi|153952779|ref|YP_001393544.1| hydrolase [Clostridium kluyveri DSM 555] gi|146345660|gb|EDK32196.1| Predicted hydrolase [Clostridium kluyveri DSM 555] Length = 262 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 20/164 (12%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 S I++D G+S ++ I F + AI +TH H DH + L Sbjct: 19 SDNTKILVDAGLSGKN-----IETALLKIGF---NPNEIDAILVTHEHTDHIKGVGVLSR 70 Query: 90 FLHVPVYASPFAIG-LLE--AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 ++P+YA+ +L+ K + + + + I S +H Sbjct: 71 KYNIPIYANALTWQCMLKYIGKIKEHNIK-------VLYNNHISIKDMDITSFSTSHDAV 123 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGN 188 + I D + D+ + +D L + + Sbjct: 124 DPYGYAIDCKNKRACVATDLGFISDEIKYILKDSDIILLESNHD 167 >gi|315165939|gb|EFU09956.1| conserved hypothetical protein [Enterococcus faecalis TX1302] Length = 429 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 131/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V +V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGTEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|291295570|ref|YP_003506968.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290470529|gb|ADD27948.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 447 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 87/279 (31%), Gaps = 63/279 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-----KDDLPGVDLVFPDITF 60 + P G + + L + +++DCG ++ G D Sbjct: 1 MRITPFGAAQTVTGSCHLVEH----QNYRLLLDCGAYQGADEERNEEPFGFD-------- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------- 105 + + A+ I+HAH DH G L L VY + +L Sbjct: 49 ----PRTVDAVLISHAHNDHIGRLPMLIRQGFAGRVYVTEPTRLILPVILEDALKLMQEE 104 Query: 106 -EAKRVYERVSKKIPCISFQ------------AGDKVDVGAFSIESVRVNHSIPETMALV 152 E R + +P +G FS H +P + + Sbjct: 105 RERLVRKGREAPPLPWNESDLAELYTRLEVVTYYQTQSLGPFSYRLRDAGH-LPGSAFIQ 163 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + + +++ +GD + D ++ + ++C+ T R Sbjct: 164 LEAAGRSLIFSGDLG-HRRKDVLVDPDYPAM-------VDLVLCEGTYGDRAHR-PFAAT 214 Query: 213 IKKN--IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ I + + G V + +F+ + R + ++ + Sbjct: 215 LEEFSGILRSVLSQNGKVFIPSFA--LERTQEVLFYIRE 251 >gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana] Length = 1396 Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 128/411 (31%), Gaps = 44/411 (10%) Query: 55 FPDITFIMK-----ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 P+ FI+ + + +A F++H H DHY L WS + +Y S L+ Sbjct: 60 IPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSK-GI-IYCSHKTARLVAEIL 117 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-----VGNIVHTG 164 + V + + + NH P + + + VHTG Sbjct: 118 Q----VPSQFVFALPMNQMVKIDGSEVVLIEANH-CPGAVQFLFKVKLESSGFEKYVHTG 172 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKN 223 D++ D +G +G+ D+T + S E+ + + I K Sbjct: 173 DFRF----CDEMRFDPFLNGFVGCDGVFL---DTTYCNPKFVFPSQEESVGYVVSVIDKI 225 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV-VSVAIDVGIIKKDQLFLS 282 ++ VL + V + + +++IA + RKIV+ + + V + G+ +D+ Sbjct: 226 SEEKVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGMFTEDENESD 285 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 G + P + E + + + + G + Sbjct: 286 VHVVGWNVLGETW---------PYFRPNFVKMNE---IMVEKGYDKVVGFVPT-GWTYEV 332 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + VR V S H ++L+ ++++P+ ++ G + K Sbjct: 333 KR-----NKFAVRFKDSMEIHLVPYSEHSNYDELREFIKFLKPKRVIPTVGVDIEKFDCK 387 Query: 403 ELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADL 453 E+ + + + + + Sbjct: 388 EVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQKNEKSDVDVVSHSAEVYEE 438 >gi|313620812|gb|EFR92040.1| metallo-beta-lactamase family protein [Listeria innocua FSL S4-378] Length = 146 Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 21/154 (13%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSEQKFQ- 114 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 F G+ +ES V+H E M + Sbjct: 115 --FDMETVKSFGSMQVESFGVSHDAIEPMFYIFH 146 >gi|221055463|ref|XP_002258870.1| RNA-metabolising metallo-beta-lactamase [Plasmodium knowlesi strain H] gi|193808940|emb|CAQ39643.1| RNA-metabolising metallo-beta-lactamase,putative [Plasmodium knowlesi strain H] Length = 914 Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 75/548 (13%), Positives = 151/548 (27%), Gaps = 124/548 (22%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDLP------- 49 ++V LG +G + + + +M DCG +P ++ Sbjct: 8 KIVIRVLGAGQTVGRSCVIVE----LENRRVMFDCGSHLGYKDERKYPNFNILVSNDTSS 63 Query: 50 -------------------GVDLVFPD---------ITFIMKERKNLMAIFITHAHEDHY 81 V++ + I + + + + + I+H H DH Sbjct: 64 VEKEKGMGEGNMYEHHLNTEVNITIVNSSISEKEKLIEKLSRINEIIDCVIISHFHMDHI 123 Query: 82 GALHDLWS--FLHVPVYASPFAIGLL---------------EAKRVYERVS--------- 115 GAL + S L E K ++ Sbjct: 124 GALPFFTEILKYRGTIIMSYPTKALSPILLLDGCRVADLKWEKKNFERQIKLLNEKSDEL 183 Query: 116 --------KKIPCISFQAG--------------DKVDVGAFSIESVRVNHSIPETMALVI 153 KK P + + ++G SI H + I Sbjct: 184 LNYNISSLKKDPWNISEEHIYSCIGKVVGLQINETYEMGNMSITPYYAGH-VLGACIYKI 242 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEK 211 ++++TGD+ D LG I + + +ST A R SE Sbjct: 243 EVNNFSVIYTGDYNTVPDKHLGS-------TKIPSLNPEIFISESTYATYVRPTRKASEL 295 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI-----VLLGSSLKRVVS 266 + +++ + G VL+ F+ + R + + + + RK+ + G L + Sbjct: 296 DLCNLVHE-CVHKGGKVLIPVFA--IGRAQELSILLDSYWRKMKINYPIYFGCGLTENAN 352 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA-LAQLSRGEMRNVKLAEK 325 + + +S + L+ + E R L + L Sbjct: 353 KYYRIYSSWVNSNCVSTDKKNLFDFANISPFVNNYLDENRPMVLFATPGMLHTGLSLKAF 412 Query: 326 DTVIFSSR---AIPGN-------EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 SS +PG I + + + + S H N Sbjct: 413 KAWAGSSNNLIVLPGYCVQGTVGHKLIMGERKISFDGSSYLNVACRIIYLSFSAHADSNG 472 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEV 435 ++++ + + PQ ++ +HGE + + + G+ + Sbjct: 473 IQQLIRHVLPQNVLFVHGEKNGMEKLSKHISSNYLINSLCPSLGQHCEFNFSKGNMKHVY 532 Query: 436 VHGLFLKD 443 V D Sbjct: 533 VQDSLYAD 540 >gi|86145609|ref|ZP_01063939.1| hypothetical protein MED222_01607 [Vibrio sp. MED222] gi|85836580|gb|EAQ54706.1| hypothetical protein MED222_01607 [Vibrio sp. MED222] Length = 446 Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 78/466 (16%), Positives = 138/466 (29%), Gaps = 90/466 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + S + ++IDCG+ +D P DI F L A+ Sbjct: 7 GGKHTVTGSC----HELRDSGQAVLIDCGLFQGEDTRPL------DIEFETSH---LNAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCI----- 121 +TH H DH G L L + + P+Y + L +E + +S K + Sbjct: 54 LLTHTHIDHIGRLPWLLASGFNQPIYCTQATAELAPLMIEDGLKLQGLSNKQSKLILKKI 113 Query: 122 -----SFQAGDKVDV--------------GAFSIESVRVNHSIPETMALVIRSP-VGNIV 161 GD + H I + + I+ P +V Sbjct: 114 HSLIAPKPYGDWFPITSTQQNNGKDHHRPNTLYARFQPAGH-ILGSAYIEIKLPSQEVVV 172 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDI 220 +GD + +L D + L +ST I+ + + K+I D Sbjct: 173 FSGDLGPSNTPLLPDP--------KPPQQADYLFIESTYGTSTHDDIASRSERLKSIIDR 224 Query: 221 MKNAKGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVG 272 G +L+ FS + R + I + I+L ++V Sbjct: 225 SLLDGGVILIPAFS--IGRTQELLFDIEHLIFEHQLSSDIPIILDSPMAEKVTRSYRRFK 282 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV---- 328 + + +P I + + +L + +A Sbjct: 283 ELWGQEAK-QRLELKRHPLAFEQCITVDGHRMHKKIVNRLKSTGEPAIVVAASGMCQGGR 341 Query: 329 -------------------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + + G E+ G ++ + + V V A+ S Sbjct: 342 IMNYLSALLPDKRTDVILAGYQAHGTLGRELQQGEMQVSIDNKDVEVNAQ-IHGMSGYSA 400 Query: 370 HPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 H DL R + P+ + IHGEP + G V Sbjct: 401 HADKEDLNRFIEGIATPPKEVHLIHGEPNTQSEFAQELKARGFVVV 446 >gi|325103497|ref|YP_004273151.1| RNA-metabolising metallo-beta-lactamase [Pedobacter saltans DSM 12145] gi|324972345|gb|ADY51329.1| RNA-metabolising metallo-beta-lactamase [Pedobacter saltans DSM 12145] Length = 467 Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 75/490 (15%), Positives = 145/490 (29%), Gaps = 94/490 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G ++ +M L I+IDCG+ + + FP Sbjct: 1 MKLTCWGAAKQVTGSMHLL----DIDNYRILIDCGLDYEGGKDLSHNANFPF------NP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-------------------- 104 + I +THAH DH G + L + +P L Sbjct: 51 AEIDLIILTHAHIDHSGNIPTLIKEGYKGQILCTPPTAELSQLLLSDAVNLFFNKKKGNP 110 Query: 105 -----LEAK-----------RVYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPE 147 L + + ++ + + S+E + H + Sbjct: 111 KGRRKLRNRSQADLYTAPLYLQKHVMDTADRMVTVAYHKQFQIRDNISLEFIPTGH-LLG 169 Query: 148 TMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 A + I TGD + +L D + L L+C+ST + Sbjct: 170 AAACKLTVSDNGVQKTITFTGDIGRQNSPVLV---DPEILSQ-----TEYLVCESTYGGK 221 Query: 204 EGTCIS--EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKI 254 + S E+ + K+I + G +++ FS V R ++++ +I + Sbjct: 222 HHSTDSTIEETLIKHITETCLEQPGRLIIPAFS--VGRTQALVYSLNKIFSKKLLPPIPV 279 Query: 255 VLLGSSLKRVVSVAIDV-GIIKKDQLFLSDESFGLYPREQLIVI-------ATGSQGEPR 306 + R V + ++ + + E L + EP Sbjct: 280 FVDSPLANRATEVYRKYKNYVNEEAEAFYETYGDKFEFENLSYVKELKESKEIADHFEPC 339 Query: 307 SALAQLSR------GEMRNVKLAEKDTVIFS----SRAIPGNEVAIGHIKNRLVEQGVRV 356 ++ + + I S G+ + G RL + + V Sbjct: 340 IIISSAGMLEGGRIQDHLFHNIQNIYAKILFIGYCSEGTLGHRLLRGDAFIRLKGKDLAV 399 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 A+ + + SGH D+ I +P+ + +HGE ++A K + V Sbjct: 400 FAKIDKTDLF-SGHADHQDILDYIAAIPKKPKRIFLVHGEQSSMLALKNDLENKDY-QVS 457 Query: 415 PVRNGKMLRL 424 G + L Sbjct: 458 LPEKGMVFEL 467 >gi|260774416|ref|ZP_05883330.1| metallo-beta-lactamase family protein RNA-specific [Vibrio metschnikovii CIP 69.14] gi|260610543|gb|EEX35748.1| metallo-beta-lactamase family protein RNA-specific [Vibrio metschnikovii CIP 69.14] Length = 443 Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 47/262 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + ++IDCG+ F D ++L FP +++ A+ Sbjct: 7 GGKHTVTGSC----HELRVDGVAVLIDCGL-FQGKDATDIELDFP--------VEHIDAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCI 121 +THAH DH G + L + P+Y +P + L+ +++ Sbjct: 54 IVTHAHIDHIGRIPWLLAAGFTGPIYCTPASAELIPLMLEDGLKLQLGLNREQIQQVLQA 113 Query: 122 SFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 Q + G + + H + + + +V +GD Sbjct: 114 IKQWLRPLCYGEWVTISDYGQAQASLQLRFQPAGHILGSAYVELRLANSEVVVFSGDLGP 173 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGC 227 + +L D L+ ++T R ++ + + + +I++ + + Sbjct: 174 SNTPLLPDPQSPQR--------ADYLVIETTYGNRNHDDVAGR--AEKLREIIQRSLENG 223 Query: 228 VLVTTFSSSVSRIRSIIDIAEQ 249 + + SV R + ++ E+ Sbjct: 224 GTILIPAFSVGRTQELLFDIER 245 >gi|224025003|ref|ZP_03643369.1| hypothetical protein BACCOPRO_01735 [Bacteroides coprophilus DSM 18228] gi|224018239|gb|EEF76237.1| hypothetical protein BACCOPRO_01735 [Bacteroides coprophilus DSM 18228] Length = 268 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 24/169 (14%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N Y + I+ID G+ G+ + Sbjct: 1 MKVKFMSLASGSSG----NC----YYLATDTDVILIDAGI--------GIRTIKKVF--- 41 Query: 62 MKERKN---LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + + + A+FITH H DH A+ L ++P+Y++P + + Sbjct: 42 KERGLDMGLIRAVFITHDHADHIKAVGHLAGKHNIPIYSTPEVHQGINRSYCMTEKLDEA 101 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + G+ + + F I V H + + I D Sbjct: 102 HTHFIRKGETMQLKDFQITCFEVPHDGTDNVGYCISIDGKTFAFLTDIG 150 >gi|218708656|ref|YP_002416277.1| putative exonuclease [Vibrio splendidus LGP32] gi|218321675|emb|CAV17629.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrio splendidus LGP32] Length = 456 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 75/457 (16%), Positives = 134/457 (29%), Gaps = 82/457 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI--MKERKNLM 69 GG I + + S + ++IDCG+ F DL G L D + E +L Sbjct: 7 GGKHTITGSC----HELRDSGQAVLIDCGL-FQGLDLQGKKLQGEDARPLDIEFETSHLN 61 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCI--- 121 A+ +TH H DH G L L + + P+Y + L +E + +S K + Sbjct: 62 ALLLTHTHIDHIGRLPWLLASGFNQPIYCTQATAELAPLMIEDGLKLQGLSHKQSKLILK 121 Query: 122 -------SFQAGDKVDV--------------GAFSIESVRVNHSIPETMALVIRSPVGNI 160 G+ + H + + + Sbjct: 122 KIHSLIAPKPYGEWFPIASKQQNDGKDHHRPNTLYARFQPAGHILGSAYIELKLPNQEVV 181 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 V +GD + +L D + L +ST I+ + + K I D Sbjct: 182 VFSGDLGTSNTPLLPDP--------KPPQQADYLFIESTYGTSTHDDIASRSERLKAIID 233 Query: 220 IMKNAKGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 G +L+ FS + R + I + I+L ++V Sbjct: 234 RSLLDGGVILIPAFS--IGRTQELLFDIENLIFEHLLSADIPIILDSPMAEKVTRSYRRF 291 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV--- 328 + + +P I + + +L + +A Sbjct: 292 KELWGQEAK-QRLELKRHPLAFEQCITVDGHRMHKKIVNRLKSTGEPAIVVAASGMCQGG 350 Query: 329 --------------------IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + G E+ G ++ + + V V A+ S Sbjct: 351 RIMNYLSALLPDKRTDVILAGYQAHGTLGRELQQGEMQVSIDNKDVEVNAQ-IHGMSGYS 409 Query: 369 GHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKE 403 H DL R + P+ + IHGEP + Sbjct: 410 AHADKEDLNRFIEGIATPPKEVHLIHGEPNTQSEFAK 446 >gi|296135595|ref|YP_003642837.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] gi|295795717|gb|ADG30507.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] Length = 476 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 66/483 (13%), Positives = 126/483 (26%), Gaps = 89/483 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L ++ ++DCG+ D + D K++ Sbjct: 6 LGAAREVTGSCFLIE----TADTRFLVDCGMVQGGRDALARNHNPFDFD-----PKSIDF 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------------- 109 + +THAH DH G L L P+Y + LL+ Sbjct: 57 VLLTHAHIDHSGLLPKLTRAGFEGPIYMTSATADLLQVMLPDSAHIQESDVERARRYARS 116 Query: 110 --VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH-----------SIPETMALVIRSP 156 + + + V + + H I + + + Sbjct: 117 AQDKIALLPPLYTMEDAQDCLRQVRPVAYDQELTPHAGVRCRFRDAGHILGSAIIEVWVS 176 Query: 157 V----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC--ISE 210 IV +GD IL D T + L+ +ST R SE Sbjct: 177 EATQTTKIVFSGDLGQPGRPILRDPT--------PIDDADILIIESTYGDRAHKDMAASE 228 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------IGRKIVLLGSSLKR 263 + + + ++ +G V+V F+ V R + I+ + ++ + Sbjct: 229 SELIEIVERTLQ--RGNVIVPAFA--VGRTQEILYHLYRLSREGRLHDLRVFVDSPMAAE 284 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------SAL 309 + + D+ + + L + T S E S + Sbjct: 285 ATRITRQYMELFDDEAQ-DLAGWHARSKAPLDLHFTASVDESMALNQIRSGAIIISASGM 343 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-- 367 R + + + + + + +H Sbjct: 344 CNAGRIKHHLRHNLPRRECSVVITGFQAQGTLGRRLVDGAKQVRIFGEDIPVRAAIHTVG 403 Query: 368 --SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 S H L P +HGE +A E + V G ++ Sbjct: 404 GLSAHADQPALLGWSAHFHKPPARTFVVHGEEAAALAFAERLRDQRGWDVTVPEPGMCVQ 463 Query: 424 LFP 426 Sbjct: 464 WDD 466 >gi|313896177|ref|ZP_07829730.1| putative ribonuclease [Selenomonas sp. oral taxon 137 str. F0430] gi|312974976|gb|EFR40438.1| putative ribonuclease [Selenomonas sp. oral taxon 137 str. F0430] Length = 536 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 56/272 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L G + ++DCG+ L + + + A Sbjct: 6 LGAAHVVTGSCYLLHTG----DRKYLVDCGMYQGTRRLREM-----NYEPFPFNPAEIEA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI----------- 118 IF+THAH DH G + L +YA+ L+ ++ Sbjct: 57 IFLTHAHIDHCGRIPQLVREGFRGKIYATKATCDLVRIMLPDSAHIQESDTEIMNRKNAR 116 Query: 119 --------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI----R 154 ++V ++ H I + L + Sbjct: 117 RSEAPVMPLYTQADAFAALEHFEPVPYHGMLNVDDLHLKYYDAGH-ILGSAILEMTVTEN 175 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 IV +GD + D + + G L+ +ST R ++ Sbjct: 176 EQQTKIVFSGDLG---QPNQPILRDPEPIA-----GADFLLVESTYGDRVHRDYDKETAL 227 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + + G V++ +F+ V R ++++ Sbjct: 228 LEVIRDTMDRGGNVIIPSFA--VGRTQTLLYY 257 >gi|315145431|gb|EFT89447.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 429 Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 127/338 (37%), Gaps = 33/338 (9%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + + L Q+ L E I S G+ + + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVF-----LALL 367 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 368 AKKDITFVRLACSGHAMPEDLDKIIALIEPQVLVPIHT 405 >gi|167036968|ref|YP_001664546.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115386|ref|YP_004185545.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855802|gb|ABY94210.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928477|gb|ADV79162.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 616 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 37/229 (16%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP--GVDLVFPDITFIMKE 64 F GG IG + L Y + I++D G L + + DI Sbjct: 204 KFFCWGG-DNIGASSYLVSYEGIN----ILLDAGALIKDKTLYYNSIKNLPIDI------ 252 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------V 110 K++ + ITHAH DH + +L L+ P+ S +L+ Sbjct: 253 -KDIDLVIITHAHLDHSAGIVELLRKGLNSPIIMSRPTKEILKQIFLRGHTRLEIKIEEE 311 Query: 111 YERVSKKIPCISFQAGDKVDVGA--FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +I + + ++ H I +A+ + I +TGD+ L Sbjct: 312 IINFDSQIISFDTEEESSFRIKNKEVKLKLFPAGH-ILGAVAVYLEIEGIKIFYTGDFTL 370 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 D L + + + L+ ++T + K ++ + Sbjct: 371 KDVESN------KGLRFLPDLKVDILITEATYGYGNNFGVQNKYLQDKL 413 >gi|198274590|ref|ZP_03207122.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] gi|198272037|gb|EDY96306.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] Length = 268 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 18/166 (10%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + F+ L G G N Y + I++D G+ G+ + Sbjct: 1 MTVKFMSLASGSSG----NC----YYLATDSTAILVDAGI--------GIRTIKKVFKER 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 M + + A+ +TH H DH A+ L +PVY +P ++ K Sbjct: 45 MLNLEEIQAVLVTHDHADHIKAVGHLGEKHGIPVYTTPEIHEGMKHSYCMTERLKPERTR 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 Q + +VG F+I V H + + I + D Sbjct: 105 FIQKEETFNVGDFTITCFEVPHDGTDNVGYCITAGDKTFSFLTDIG 150 >gi|282856021|ref|ZP_06265310.1| ribonuclease [Pyramidobacter piscolens W5455] gi|282586140|gb|EFB91419.1| ribonuclease [Pyramidobacter piscolens W5455] Length = 594 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 72/452 (15%), Positives = 125/452 (27%), Gaps = 88/452 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F G E+ + L G ++DCG+ + + + Sbjct: 3 LKFC--GAAKEVTGSNYLLEAG----GHRFLVDCGMHQGERED-------ANDDPFPYAA 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------- 109 ++ A+ +THAH DH G + L +YA+ I L E Sbjct: 50 NSIDAVLLTHAHIDHSGRIPKLVKEGFRGKIYATLPTIELTEILWDDSVRLMREDAEWQS 109 Query: 110 -----------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +KK+ + S+ H I + L Sbjct: 110 AKNARRGLPPAEPIYGQEEADAAKKLFTPVNYDSRLEILPGVSVRFRDAGH-ILGSAILE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I +V +GD + + I + ++ +ST RE Sbjct: 169 ILIEEEGRIVRLVFSGDLGPMQTVMG------RAPAEITD--ADYVVIESTYGNREHKDN 220 Query: 209 SEK--GIKKNIYDIMKNAKGCVLVTTFSSS-VSRIRSIIDIAEQIGRK---IVLLGSSLK 262 + + + DI KG V + TF RI +++ G V S + Sbjct: 221 QQTRDEFQTLMKDIFAKKKGKVFIPTFVVDRAQRIMYELELLRGQGVGGGMPVFFDSPMG 280 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ----------L 312 VS + + Q + G P + ++ E ++ + Sbjct: 281 VKVSKLYENHLDLMSQEIQTYRRDGGNPFSSEDIRYVSTREESQAVNNLGFGVVMAGSGM 340 Query: 313 SRGE---MRNVKL--AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 G + V+F G I +R + A + +H Sbjct: 341 CNGGRIVHHLKNGIWNPDNHVVFVGYQAHG--TLGRRIVDRAKTVRIAGEAVNVNAQIHT 398 Query: 368 ----SGHPYPNDLKRMYQWIRPQV--LVAIHG 393 S H DL + RP + HG Sbjct: 399 IGGFSAHADRTDLLGWAERFRPTMPKFFVTHG 430 >gi|219853444|ref|YP_002470566.1| hypothetical protein CKR_0101 [Clostridium kluyveri NBRC 12016] gi|219567168|dbj|BAH05152.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 267 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 20/164 (12%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 S I++D G+S ++ I F + AI +TH H DH + L Sbjct: 24 SDNTKILVDAGLSGKN-----IETALLKIGF---NPNEIDAILVTHEHTDHIKGVGVLSR 75 Query: 90 FLHVPVYASPFAIG-LLE--AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 ++P+YA+ +L+ K + + + + I S +H Sbjct: 76 KYNIPIYANALTWQCMLKYIGKIKEHNIK-------VLYNNHISIKDMDITSFSTSHDAV 128 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGN 188 + I D + D+ + +D L + + Sbjct: 129 DPYGYAIDCKNKRACVATDLGFISDEIKYILKDSDIILLESNHD 172 >gi|118443215|ref|YP_877046.1| metallo-beta-lactamase superfamily protein [Clostridium novyi NT] gi|118133671|gb|ABK60715.1| Metallo-beta-lactamase superfamily protein [Clostridium novyi NT] Length = 262 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 21/208 (10%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I+ID G+ PG + + I K ++ IF+TH H DH + L ++P Sbjct: 24 ILIDAGL-------PG-KHIEKALEAINKNPNDIDGIFVTHEHIDHVKGVGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ ++ K+ + + I + ++H + + I Sbjct: 76 IYANELTWQGMK---KNIGKIKEENINIISKHKNITIKDMDIFNYSISHDAVDPVGYAIY 132 Query: 155 SPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 S D + D+ D L + + +L ++ Sbjct: 133 SGKSKACVATDLGYFSDEVRENTKDADVVLLESNHDVEMLKF--------GPYPYNLKRR 184 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 I N+ + + G +VT ++ I Sbjct: 185 ILSNVGHLSNDDCGKAIVTMTENNCKNI 212 >gi|323704746|ref|ZP_08116323.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535672|gb|EGB25446.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 270 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 73/227 (32%), Gaps = 26/227 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N A GY I++D G+S + L +D+ ++ AI ITH Sbjct: 23 GNAAYIGYKDVH----ILVDAGLSGSTIEKSLLNIDV----------NPHSISAILITHE 68 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L +P+YA+ +E+ K + G+ +G I Sbjct: 69 HNDHIKGAGILSRRYDIPIYANEATWSSMESFIGDIEPHNKRFFKT---GEDFTLGDVKI 125 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + +H E + D + ++ D D + N + LM Sbjct: 126 RPFKKSHDASEPVGFSFFCGQNKATIATDLGYISRGVAANIMDSDVVLLESNHDVDMLMN 185 Query: 197 DS------TNAMREGTCISEKGIKKNIYD-IMKNAKGCVLVTTFSSS 236 + + +S K + I I A G + + S + Sbjct: 186 GTYPWPLKKRILSPHGHLSNKDAAEAIKKFIKLKAIGKIYLGHLSQN 232 >gi|224369116|ref|YP_002603280.1| metallo-beta-lactamase family protein (RNase) [Desulfobacterium autotrophicum HRM2] gi|223691833|gb|ACN15116.1| metallo-beta-lactamase family protein (RNase) [Desulfobacterium autotrophicum HRM2] Length = 430 Score = 80.1 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 69/449 (15%), Positives = 130/449 (28%), Gaps = 88/449 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG + + L + IM+DCG + G D P + ++ Sbjct: 1 MQITHLGGADCVTGSCHLLQANGLN----IMVDCG------AVQGNDTAVPMERWPVQPC 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIG----LLEAKRVYERVSKKIPC 120 + +F+THAH DH G + DL + + + +LE + + Sbjct: 51 D-IDYLFLTHAHVDHIGQVPDLIDKGFKGVIICTHPTLEILFPMLEDAMGFSDRNPSQIE 109 Query: 121 ISFQAGDKVDVG-----------AFSIESVRVNHSIPETMALVIRSPVGN--IVHTGDWK 167 + + + G + H I + + S +V +GD Sbjct: 110 KIKASLEDLAWGFEYGRTFDLKAGIRFKLGNAGH-ILGSCFIRFESSDPPWSVVFSGDLG 168 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIMKNAK 225 D + D + L+ +ST R E+ + + + + + Sbjct: 169 P-PDTPILPAPDIS-------DPCDLLILESTYGDRLHGDRKERVGRLGRILLKALSD-N 219 Query: 226 GCVLVTTF--------SSSVSRIRSIIDIAEQIGRKI-----------------VLLG-- 258 G V V F + RI + AE+I + G Sbjct: 220 GKVFVPVFALGRCQELIYEMDRIFGGWEQAEKIPVFVDSPLGLQITNIYSKLSEYWDGEA 279 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEPRSALAQLSRGE 316 +L ID + + S +I+ +G + G + L + Sbjct: 280 KALLDAGDHPIDFKNLYAVENHGSHAQLTDIKGPAVILAGSGMCTGGRIVNHLKKGLEDR 339 Query: 317 MRNV-------KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 ++ + ++ S+ G G N S Sbjct: 340 RNDLLFVGYQAQGTPGRDIVRYSKTRGGYVRLEGKRINIKAR---------VHELTGYSA 390 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H DL + RP+ + +HG+P Sbjct: 391 HADQKDLVNWVNAMEKRPKGIRLVHGDPE 419 >gi|182417034|ref|ZP_02948413.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237669633|ref|ZP_04529611.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379131|gb|EDT76634.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237654867|gb|EEP52429.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 263 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 15/143 (10%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPG--VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 S R I+ID G+ PG +D I +E KN+ IFITH H DH + Sbjct: 17 ITSDRAKILIDAGL-------PGKKIDEAL---KAIDEETKNIDGIFITHEHSDHIKGVG 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E K+ ++G +I++ + H Sbjct: 67 VISRKYDIPIYANADTWSAMEGSL---GKIKEHNIKVIDKRSVTEIGDLNIKAFNIPHDA 123 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 M + NI D+ Sbjct: 124 AGPMGYTVSDGKKNISVATDFGT 146 >gi|170288070|ref|YP_001738308.1| metallo-beta-lactamase superfamily hydrolase-like protein [Thermotoga sp. RQ2] gi|170175573|gb|ACB08625.1| hydrolase of the metallo-beta-lactamase superfamily-like protein [Thermotoga sp. RQ2] Length = 522 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 65/505 (12%), Positives = 144/505 (28%), Gaps = 122/505 (24%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L G IG N S ++D G++F + + + P I+ + Sbjct: 1 MRIEILDGHRNIGGNKIRV---VDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDL 57 Query: 66 KNLMAI------------------------FITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L + F++HAH DH G + + +P+ + Sbjct: 58 LKLEMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLI--DEKIPLLMTGET 115 Query: 102 IGLLEA-----------------------KRVYERVSKKIPCISFQAG------------ 126 ++ A K + + + + + Sbjct: 116 FAVMRASVYTSNSNVLTQLGGKKRRKASDKDLENGIREDLTVSPGNSKSAERLTRRVSFP 175 Query: 127 ------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DA 172 D + + V HS+ R + +TGD++ Sbjct: 176 KEVELNDDSTVVDMNSLWKNELFVEPVYHSVIGAAGFAARVDDLWLAYTGDFRTGPETAE 235 Query: 173 ILGDVTD---KDSLC----------AIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIY 218 D + L + ++ L L+ + T RE +EK + +N Sbjct: 236 EERYWLDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAM 295 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII---- 274 + + K +LV + R+ + + + + R++VL+ ++ + + Sbjct: 296 RVFRGTKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTD 355 Query: 275 ----------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNV-- 320 +++ E L + ++ + + + G + ++ Sbjct: 356 EERSFVRVYHPGKVTYINLEKDALLRAREEGILLSPEEINLHPEKHTMVAGYWDFPHILD 415 Query: 321 ---KLAEKDTVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVI-------AEDAECPVHVS 368 ++ I S+ E I N L + H S Sbjct: 416 LDERVLNGAVYIHSTSEAYTEEQEIDARRFMNWLRYFNIVPFGIREVNGNIVFTKEFHAS 475 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHG 393 GH P L+++ + P +V +H Sbjct: 476 GHVSPQGLEKILNELNPDYIVPVHT 500 >gi|270308322|ref|YP_003330380.1| metallo-beta-lactamase [Dehalococcoides sp. VS] gi|270154214|gb|ACZ62052.1| metallo-beta-lactamase [Dehalococcoides sp. VS] Length = 467 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 75/453 (16%), Positives = 147/453 (32%), Gaps = 78/453 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG N+ Y +++ +++DCG+ + + L + DI+ Sbjct: 3 IEIQFLGAAQ----NVTGSRYLLKTAQTHLLVDCGL-YQEHRLQERNWQPFDIS-----P 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------------AK 108 ++L A+ I+HAH DH G L L PV+A+ + K Sbjct: 53 ESLSAVLISHAHIDHCGLLPKLVKDGFSGPVFATEATAEIARISLADAGKLQEEDAAFKK 112 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS--IP-ETMALVIRSPVGNIVHTGD 165 + +E +K D A V +S IP G++ + Sbjct: 113 KRHEHEGRKTRYPEIPLYTAEDAKAVFPLFNIVEYSREIPVSADVTATFHNAGHVFGSAS 172 Query: 166 W-----KLDDDAILGDVTDKDSLCAIGNEGILA------LMCDSTNAMREGTCISEKGIK 214 + + ++ D + + ++ +ST R I+E +K Sbjct: 173 IELRVTENNQHTVIAFSGDLGNWNRPILKNPDLIDQADYIVIESTYGDRTHEDINEASLK 232 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSV 267 NI + G +++ +F+ + R + ++ + R V + S + ++ Sbjct: 233 LANIINQTIQRGGNIVIPSFA--LERTQDLLYFLNRFMSESKIPRLKVFVDSPMAISITK 290 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ--------------LS 313 D+ G P E + T + ++ L++ Sbjct: 291 IFTKYPELYDRETAGWVKNGSSPFEFEGLYFTNKVADSKAILSEKTPCIIIAGSGMCTGG 350 Query: 314 RGEMRNVK--LAEKDTVIFSSRAIPGNEVAIGHIKN------RLVEQGVRVIAEDAECPV 365 R + V + T++F G +G + R++ Q V A E Sbjct: 351 RIKHHLVNNISRPESTILFVGFQATG---TLGRLITDGAKEVRILGQYYPVRAHIKELRA 407 Query: 366 HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H L R + +P+ + HGEP Sbjct: 408 F-SAHADQPTLLRWLKGFKNKPKRVFVTHGEPE 439 >gi|320547233|ref|ZP_08041526.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320448121|gb|EFW88871.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 269 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + +S+K ++ID G++ + + DI ++ ++L AI ITH H DH + Sbjct: 19 SFYVETSQKRLLIDAGLT-----GKKITSLLADID---RKPEDLDAILITHEHSDHIKGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++ VYA+ +++ + F+ G + G IES V+H Sbjct: 71 GVLARRYNLDVYANEKTWQMIDER-NMIGKLDTAQKHVFERGKVLTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + + V D + D A + + D Sbjct: 130 AVDPQFYRLMKDNKSFVVLTDTGYVSDRMAGVIENAD 166 >gi|145507230|ref|XP_001439570.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124406765|emb|CAK72173.1| unnamed protein product [Paramecium tetraurelia] Length = 484 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 66/432 (15%), Positives = 138/432 (31%), Gaps = 56/432 (12%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSF--- 90 M+DCG+ D + FPD + I ++ RK + + ITH H DH GAL Sbjct: 1 MLDCGLHMTHQD----NRRFPDFSLIEEKLGRKYVDLVLITHFHLDHCGALPYFTELYGN 56 Query: 91 -LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN------- 142 + PV S LL R +P Q + +SI Sbjct: 57 GYNGPVVMSMPTKALLPYMLEDYRRIWTMPKEDQQFQQQSSQQDYSINPQIKTDPLLIYD 116 Query: 143 HSIPETMALVIR-----------------SPVGNIVHTGDWKLDDDAILGDVTDKDSL-- 183 H ++ ++ G+++ + + + + L Sbjct: 117 HENIKSCVNKVQVIGLYETQNFDGVEVTAYYAGHLLGACMFHVKYKNEIYNSIADRHLGG 176 Query: 184 CAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTF----SSSV 237 I ++ +ST A R+ E+ ++ +++ G VL+ F + + Sbjct: 177 AYIDQLQPDLVISESTYATIIRDSKRTRERNFLMHVQEVLDRG-GKVLIPVFALGRAQEL 235 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 S + + + +++ + +++ S ++ + + Sbjct: 236 SVLLESYWQRTKCKAGLYYAAGLIEKANQYYKIFTGWESEKIQQSFLDDNIFNFKYIQPF 295 Query: 298 ATGSQGEPRSALAQLSRGE-MRNVKLA---EKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 P S + + G + + E +S IPG G + N+L+ Sbjct: 296 DRNLIKSPLSMVLLATPGMLHGGLSMQVFKEWCGCANNSLVIPGY-CVPGTLGNKLLAGV 354 Query: 354 VRVIAEDAECPV-------HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL-HLVAHKELA 405 V ++ + + S H + ++ ++P+ + +HGE E+ Sbjct: 355 KHVRIDNKDYDIKMQINNMSFSAHADSRGIIQLVNHLQPKSIAFVHGEYHRMKTLGAEII 414 Query: 406 LQEGIACVPPVR 417 + I P Sbjct: 415 DKIQIRVDCPAN 426 >gi|152986623|ref|YP_001346910.1| hypothetical protein PSPA7_1526 [Pseudomonas aeruginosa PA7] gi|150961781|gb|ABR83806.1| hypothetical protein PSPA7_1526 [Pseudomonas aeruginosa PA7] Length = 467 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 72/462 (15%), Positives = 131/462 (28%), Gaps = 97/462 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLM 69 LG E+ + L ++++CG+ + + G FP ++ Sbjct: 7 LGAAQEVTGSCYLLE---TLDGARVLLECGMRQGRREADEGNRAPFP-FD-----PASID 57 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERVSK 116 A+ I+HAH DH G L L + P++A+ LLE R Sbjct: 58 AVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSAHIQEKDAEWENRWRN 117 Query: 117 KIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMALVIRSP 156 +I S + + +G + H I + + ++ Sbjct: 118 RIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFHNAGH-ILGSSIVEVQFH 176 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 +V +GD ++ + +M +ST R+ +E Sbjct: 177 DQVQPRRLVFSGDLGNTCSPLMRAPSPLSR--------ADVVMLESTYGDRDHRDSNETL 228 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 I D G VL+ +F+ V R + ++ + G ++ V + + Sbjct: 229 EELAAILDQAHRDGGNVLIPSFA--VGRTQDLLYYLGRF----YQEGRLPQQAVFLDSPM 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--AQLSRGEMRNVKLAEKDTVI 329 F RE + T E L + + M ++ +I Sbjct: 283 AARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINRIKSGAIII 342 Query: 330 FSSRAIPGNEVAIG-------------------------HIKNRLVEQGVRVIAEDAECP 364 S G + +I + V + Sbjct: 343 AGSGMCTGGRIVHHFKHNLWRPECHIVFPGFQARGTLGRNIVDGASAVRVFHQRIAVKAQ 402 Query: 365 VHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVA 400 +H S H + L RP L IHGE + A Sbjct: 403 IHTLGGFSAHAGQSQLLDWVGHFAHRP-ALYLIHGEREKMEA 443 >gi|319956702|ref|YP_004167965.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] gi|319419106|gb|ADV46216.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] Length = 471 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 71/450 (15%), Positives = 132/450 (29%), Gaps = 87/450 (19%) Query: 1 MKNEELVFLPLGGVGEI-GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK E++ L G E+ + L + I++DCG + + P + Sbjct: 1 MKGEKMAILESHGADEVVTGSCHLL---KLENGMRILVDCG-MYQGREEPR------NWE 50 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE 112 K + A+ +THAH DH G + L P+YA+ L AK + E Sbjct: 51 PFGFNPKKVDALLVTHAHLDHVGRIPKLVKEGFRGPIYATEATFELANIVLLDSAKLMEE 110 Query: 113 RVSKKI----------------------------PCISFQAGDKVDVGAFSIESVRVNHS 144 + P I + G VG R Sbjct: 111 DYRTRYKKAQRRGEEKDVRPPLYTVEDVENVWLRPTIHVKYGKWFRVGKGVRARYRNAGH 170 Query: 145 IPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 I + + I IV +GD + ++ + + L+ +ST Sbjct: 171 ILGSAFIEIEYTEGEGKKRIVFSGDLG-NKVEVVMPRIEHAKIA-------DNLVIESTY 222 Query: 201 AMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-IGRKIVLL 257 R+ + E K KK + D + N +G V++ +F+ + R + ++ + +Q K + Sbjct: 223 GDRDHRPLKESIKEFKKVVRDTLLN-RGNVIIPSFA--IERTQDLLCVLKQMYKDKELPY 279 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 + K LS Y + + G P ++ Sbjct: 280 CKVFLDTPMGIRTTNVFNKYVDQLSPRCQKFYKEDGEVFQFPGLIFTPEVEDSKRINDVA 339 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIA 358 R + + R + + I + I + Sbjct: 340 RGAIIIAGSGMCTGGRILHHFKHQIWNRRNAVIFVGYQAEGTIGREIVEGAKWIKIYHED 399 Query: 359 EDAECPVHV----SGHPYPNDLKRMYQWIR 384 +H S H ++L + + Sbjct: 400 IRVRASIHTINGFSAHADQDELIDWMKAFK 429 >gi|254381636|ref|ZP_04997000.1| beta-lactamase domain containing protein [Streptomyces sp. Mg1] gi|194340545|gb|EDX21511.1| beta-lactamase domain containing protein [Streptomyces sp. Mg1] Length = 456 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 77/455 (16%), Positives = 131/455 (28%), Gaps = 102/455 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKD-----DLPGVDLVFPDITFIMK 63 LG V + + L S I++DCG+ F D PG D Sbjct: 2 LGAVRTVTGSKFLVE----SDHCRILVDCGLFQGFADLRRRNWDKPGFD----------- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 +L A+ +THAH DH G L L P+ ++P L E Sbjct: 47 -ASDLRAVVVTHAHLDHCGYLPRLVRHGFRGPILSTPGTARLAEIVLRDSARLQMEAAEH 105 Query: 112 --------ERVSKKIPCISFQAGDKVDVGAFSI------------ESVRVNHSIPETMAL 151 R +K + + + H + A Sbjct: 106 ANSRGWSKHRPAKPLYDDADVETTLKFFDPVEVGSVTEIMAGTELRLHHGGHILGSAWAH 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 + + +GD L G L+ +ST R + + Sbjct: 166 LTLEDGHTLAVSGDLG--------RPGHPLLLPPEPFTGADVLLMESTYGDRRHDHETAR 217 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + + G V++ F+ + R ++ ++ R L S+ V + + Sbjct: 218 REFAAVITRTLSRGGTVVIPAFA--IDRTEVVLHELAEL-RSEGTLPRSVPVYVDSPMAL 274 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 + + L + L P I+ + P LA + E ++ VI S Sbjct: 275 AALDVYRDALRSHAPELRPE---ILAQGEAALGPEPFLAARTVQESIDINSTTGPAVIVS 331 Query: 332 SR-----------------------AIPGNEVAIGHIKN--------RLVEQGVRVIAED 360 S I G A ++ ++ + V V AE Sbjct: 332 SAGMATGGRVLHHLHRLLPDPRNAVVIVGFAAAGTRARDLVDGVRTLKMFGEYVPVRAEV 391 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQV-LVAIHGE 394 A+ P H S H + + + P +HGE Sbjct: 392 ADVP-HFSAHADADQIIDWLRAAPPPHTTYLVHGE 425 >gi|320529204|ref|ZP_08030296.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] gi|320138834|gb|EFW30724.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] Length = 536 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 56/272 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L G + ++DCG+ L + + + A Sbjct: 6 LGAAHVVTGSCYLLHTG----DRKYLVDCGMYQGTRRLREM-----NYEPFPFNPAEIEA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI----------- 118 +F+THAH DH G + L +YA+ L+ ++ Sbjct: 57 VFLTHAHIDHCGRIPQLVREGFRGKIYATKATCDLVRIMLPDSAHIQESDTEIMNRKNAR 116 Query: 119 --------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI----R 154 ++V ++ H I + L + Sbjct: 117 RSEAPVMPLYTQADAFAALEHFEPVPYHGMLNVDDLHLKYYDAGH-ILGSAILEMTVTEN 175 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 IV +GD + D + + G L+ +ST R ++ Sbjct: 176 EQQTKIVFSGDLG---QPNQPILRDPEPIA-----GADFLLVESTYGDRVHRDYDKETAL 227 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + + G V++ +F+ V R ++++ Sbjct: 228 LEVIRDTMDRGGNVIIPSFA--VGRTQTLLYY 257 >gi|260770634|ref|ZP_05879565.1| metallo-beta-lactamase family protein RNA-specific [Vibrio furnissii CIP 102972] gi|260614360|gb|EEX39548.1| metallo-beta-lactamase family protein RNA-specific [Vibrio furnissii CIP 102972] Length = 439 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 83/457 (18%), Positives = 140/457 (30%), Gaps = 80/457 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I IDCG F D V+ PD ++ A+ Sbjct: 7 GGKQTVTGSC----HELVVDDLAIFIDCG-MFQGQDTQDVE---PDFP-----IDHIQAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 +THAH DH G L L + P+Y +P L+ + + + Sbjct: 54 ILTHAHIDHIGRLPWLIASGFTAPIYCTPATAELVPLMLDDAMKLQSGFSRAQREVVLDK 113 Query: 131 VG----------AFSIE----------SVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 + F IE V H I + + I+ P IV +GD Sbjct: 114 IDHLIDPIDYEQPFRIESDSGVMLQCQFVPAGH-ILGSAYVEIQMPNQEVIVFSGDLGPS 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGC 227 +L D + L+ ++T + +++ I + + G Sbjct: 173 CTPLLPDP--------VPPMHADYLVIETTYGDTHHDGVDVRASKLREIIDRSLADG-GT 223 Query: 228 VLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 +L+ FS V R + + + + I+L ++V + D+ Sbjct: 224 ILIPAFS--VGRTQEVLFDIEQLVYEHQINVDLPILLDSPMAQKVTESYRRYKQLWGDEA 281 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI---------- 329 + V+ + S GE V A Sbjct: 282 KERLAMNRHPLAFEQCVLVQDYRSHQALVNRLSSTGEAAIVVAASGMCEGGRIVDYLKAL 341 Query: 330 ---FSSRAIPGNEVAIGHIKNRLVEQGVRVIAE----DAECPVHV----SGHPYPNDLKR 378 + I A G + + + V+ E D +HV S H +DL Sbjct: 342 LPDARTDIIFAGFQAEGTLGRAIQQGEKVVMIEGEAIDVNAQIHVMSGYSAHADQDDLLA 401 Query: 379 MYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + I +P+ + IHGEP A EL +G V Sbjct: 402 FVEGIDEKPKQVHLIHGEPQAKQAFAELLRGKGYTVV 438 >gi|154502705|ref|ZP_02039765.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] gi|153796588|gb|EDN79008.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] Length = 265 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 13/164 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S ++ID G+ +D + + + + L I ITH H Sbjct: 12 GNCIYVG----SDNTHLLIDTGI-----SKKRIDAGLKE---LEIKGEELDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+P I ++A + + + +G + Sbjct: 60 DHIQGLGVFSRKYEIPIYATPGTIAGIQAY-SRLGAMPEGLYHVIHSDESFMLGDIRVNP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++H E + ++ D + D + + + D+ Sbjct: 119 FAISHDANEPTGYRLECRDKSVAVATDLGIYDAYTVSHLQNLDA 162 >gi|84387654|ref|ZP_00990671.1| hypothetical protein V12B01_09291 [Vibrio splendidus 12B01] gi|84377499|gb|EAP94365.1| hypothetical protein V12B01_09291 [Vibrio splendidus 12B01] Length = 456 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 80/474 (16%), Positives = 140/474 (29%), Gaps = 96/474 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-----GVDLVFPDITFIMKERK 66 GG + + + S + ++IDCG+ F DL G D DI F Sbjct: 7 GGKHTVTGSC----HELRDSGQAVLIDCGL-FQGLDLQSKKLQGADTRPLDIEFETSH-- 59 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCI 121 L A+ +TH H DH G L L + + P+Y + L +E + +S K + Sbjct: 60 -LNALLLTHTHIDHIGRLPWLLASGFNQPIYCTQATAELAPLMIEDGLKLQGLSHKKSKL 118 Query: 122 ----------SFQAGDKVDV--------------GAFSIESVRVNHSIPETMALVIRSPV 157 G+ + H + + Sbjct: 119 ILKKIHSLIAPKPYGEWFPIVSKQQNDGKAHHRPNTLYARFQPAGHILGSAYIELKLPNQ 178 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KN 216 +V +GD + +L D + L +ST I+ + + K Sbjct: 179 EVVVFSGDLGPSNTPLLPDP--------KPPQQTDYLFIESTYGTSTHDDIASRSERLKA 230 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLG-------SSL 261 I D G +L+ FS + R + I + I+L S Sbjct: 231 IIDRSLLDGGVILIPAFS--IGRTQELLFDIENLIFEHQLSADIPIILDSPMADKVTRSY 288 Query: 262 KRVVSV----------AIDVGIIKKDQLFLSDESFGLYPREQLI------VIATGS---- 301 +R + + + + + +L ++ S Sbjct: 289 RRFKELWGQEAKQRLEVKRHPLAFEQCITVDGHRMHKKIVNRLKSTGEPAIVVAASGMCQ 348 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 G + L+ L K + + + G E+ G + + + V V A+ Sbjct: 349 GGRIMNYLSALLPD-----KRTDVVLAGYQAHGTLGRELQQGKTQVFIDNKDVEVNAQ-I 402 Query: 362 ECPVHVSGHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 S H DL R + P+ + IHGEP + + G V Sbjct: 403 HGMSGYSAHADKEDLYRFIEGMATPPKEVHLIHGEPNTQSEFAQELKERGFVVV 456 >gi|257088046|ref|ZP_05582407.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256996076|gb|EEU83378.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|315028162|gb|EFT40094.1| conserved hypothetical protein [Enterococcus faecalis TX2137] Length = 429 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 131/340 (38%), Gaps = 37/340 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRL-HGHNREETLAF 203 Query: 181 DSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSS 235 + EG+ + + +SE+ + +++ + ++N + + + Sbjct: 204 CKKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPA 263 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQL 294 +V R II+ + R +VL + ++ V I+V + + + + L Sbjct: 264 NVERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKILELNPALEIPYDT 320 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQG 353 ++ + L Q+ L E I S ++ + + + L ++ Sbjct: 321 LL------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKD 371 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + + SGH P DL ++ I PQVLV IH Sbjct: 372 ITFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|307268829|ref|ZP_07550196.1| hypothetical protein HMPREF9498_00961 [Enterococcus faecalis TX4248] gi|306514833|gb|EFM83381.1| hypothetical protein HMPREF9498_00961 [Enterococcus faecalis TX4248] Length = 429 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKILELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|150019869|ref|YP_001312123.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906334|gb|ABR37167.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 15/141 (10%) Query: 30 SSRKWIMIDCGVSFPKDDLPG--VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S++ I+ID G+ PG +DL I + K+L IFITH H DH + L Sbjct: 19 SNKAKILIDAGL-------PGKKIDLAL---QEINENPKDLNGIFITHEHSDHIKGVGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ +E+ K+ ++ SI++ + H Sbjct: 69 SRKYDIPIYANADTWSAMESLI---GNIKEHNIKVIDKRSFTEIEDMSIKAFNIPHDAAA 125 Query: 148 TMALVIRSPVGNIVHTGDWKL 168 M + S +I D+ Sbjct: 126 PMGYTVSSGEKSISVATDFGT 146 >gi|281411890|ref|YP_003345969.1| metallo-beta-lactamase superfamily hydrolase-like protein [Thermotoga naphthophila RKU-10] gi|281372993|gb|ADA66555.1| metallo-beta-lactamase superfamily hydrolase-like protein [Thermotoga naphthophila RKU-10] Length = 522 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 66/505 (13%), Positives = 146/505 (28%), Gaps = 122/505 (24%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L G IG N S ++D G++F + + + P I+ + Sbjct: 1 MRIEILDGHRNIGGNKIRV---VDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDL 57 Query: 66 KNLMAI------------------------FITHAHEDHYGALHDLWSFLHVPVYASPFA 101 L + F++HAH DH G + + +P+ + Sbjct: 58 LKLEMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLI--DEKIPLLMTGET 115 Query: 102 IGLLEA-----------------------KRVYERVSKKIPCISFQAG------------ 126 ++ A K + + + + + Sbjct: 116 FAVMRASVYTSNSNVLTQLGGKKRRRVSDKDLENGIREDLTVSPGNSKSAERLTRRVSFP 175 Query: 127 ------------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DA 172 D + + V HS+ L R + +TGD++ Sbjct: 176 KEVELNDDSTVVDMNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAE 235 Query: 173 ILGDVTD---KDSLC----------AIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIY 218 D + L + ++ L L+ + T RE +EK + +N Sbjct: 236 EERYWLDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAM 295 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII---- 274 + + K +LV + R+ + + + + R++VL+ ++ + + Sbjct: 296 RVFRGTKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTD 355 Query: 275 ----------KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNV-- 320 +++ E L ++ ++ + + + G + ++ Sbjct: 356 EERSFVRVYHPGKVTYINLEKDALLRAKEEGILLSPEEINLHPEKHTMVAGYWDFPHILD 415 Query: 321 ---KLAEKDTVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVI-------AEDAECPVHVS 368 ++ I S+ E I N L + H S Sbjct: 416 LDERVLNGAVYIHSTSEAYTEEQEIDARRFMNWLRYFNIVPFGIREVNGNIVFTKEFHAS 475 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHG 393 GH P L+++ + P +V +H Sbjct: 476 GHVSPQGLEKILNELNPDYIVPVHT 500 >gi|315032274|gb|EFT44206.1| conserved hypothetical protein [Enterococcus faecalis TX0017] Length = 429 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSLFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKILELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|256618311|ref|ZP_05475157.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|257077413|ref|ZP_05571774.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294779667|ref|ZP_06745058.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|256597838|gb|EEU17014.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256985443|gb|EEU72745.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294453324|gb|EFG21735.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|329573320|gb|EGG54933.1| hypothetical protein HMPREF9520_02183 [Enterococcus faecalis TX1467] Length = 429 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKILELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|315148776|gb|EFT92792.1| conserved hypothetical protein [Enterococcus faecalis TX4244] Length = 429 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKILELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|284047926|ref|YP_003398265.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] gi|283952147|gb|ADB46950.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] Length = 535 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 66/493 (13%), Positives = 146/493 (29%), Gaps = 84/493 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + K I++DCG F L DL +F Sbjct: 1 MKITFLGADKIVTGSCHLLE----VNGKKILLDCG-MFQGPKLIR-DLNRKPFSF---NP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI------ 118 + A+ ++HAH DH G L L ++ +P L + ++ Sbjct: 52 GEIDAVILSHAHIDHSGLLPRLIKEGFKGFIHCTPVTEELCQILLPDCGHIQESDAEIAT 111 Query: 119 -------------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 I+ + V++ RV I + + + Sbjct: 112 RKGLRAGKSAVEPLYTADDAYLALKHFITHDYDEDVELYPGITFRFRVAGHILGSALVNL 171 Query: 154 RSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 ++ TGD + + D + G ++ +ST R I Sbjct: 172 MIEENGKKTKLIFTGDVG---QPNVPILDDPHQIS-----GADFIITESTYGNRIHEQID 223 Query: 210 -EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-GRKIVLLGSSLKRVVSV 267 EK + + D + G V++ F+ V R + ++ +++ + + + Sbjct: 224 REKELCDVMKDALSRG-GNVIIPAFA--VGRTQVMLYYFQKLMNSGQLPVVPIMVDSPMA 280 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVI---------------ATGSQGEPRSALAQL 312 ++ + +E+ ++ +++ +I A P ++ Sbjct: 281 IKATQVMLYNPEEYDEEARTIFQKQKGRLIDMPNVKYTETPAESRAINDMPSPMIIISAS 340 Query: 313 SRGEM-RNVKLAEKDTVIFSSRAIPGNEVAI----GHIKNRLVEQGVRVIAEDAECPVH- 366 + R + + + S I A + + + + ++ Sbjct: 341 GMADAGRVLHHLKHNLWRKDSSVIFAGYQAEGSLGRRLIDGAKKVKIMGEDIVVGAKIYN 400 Query: 367 ---VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 S H + + +Y+ + +P+ +HGE A L E G Sbjct: 401 LSGFSAHADRDQMLALYKGMQQKPKAFFVVHGEYDAASAFAHLLNTELGTATYIPNFGDA 460 Query: 422 LRLFPDPIEIIDE 434 + I + Sbjct: 461 AIIDGTDWRIEET 473 >gi|295100634|emb|CBK98179.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Faecalibacterium prausnitzii L2-6] Length = 535 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 75/501 (14%), Positives = 145/501 (28%), Gaps = 100/501 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L +IDCG+ G D+ + I Sbjct: 1 MKLTFLGANHEVTGSCTLLEAAGQR----YLIDCGM------EQGKDVY--ENQPIPVAP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 + + THAH DH G L L +YA+ L ++ Sbjct: 49 GEIDGVLATHAHIDHTGLLPLLVRNGFRGRIYATRPTAELCSIMLRDSAHIQEFEAEWKN 108 Query: 120 --------------------------CISFQAGDKVDVGA-FSIESVRVNHSIPETMALV 152 + ++++ I V V H + + ++ Sbjct: 109 RKGQRSGAEPVEPMYTIQDAEAAIALFRGYDYNKEIELAPGIVIRFVDVGH-LLGSSSIE 167 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I +V +GD D I+ D T + + +ST R Sbjct: 168 IWVTENGATTKLVFSGDIGNHDQPIIKDPTYL--------KDADYVFMESTYGDRSHGPR 219 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + + K + G V++ +F+ V R + ++ +I K ++ G Sbjct: 220 PDYVGELTKILQRTFDRG-GNVVIPSFA--VGRTQELLYFIREIKEKNLVTG---HGCFP 273 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEK 325 V ID + + D + E ++A G L ++ E R + Sbjct: 274 VYIDSPLAIEATRIFKDTDSSCFDEETNALLAKGIDPIQFPGLKVSVTSDESRAINTDPV 333 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC---------------------- 363 VI S+ + H+K+ L + ++ + Sbjct: 334 PKVIISASGMCEAGRIRHHLKHNLWRKECTILFVGYQAVNTLGRSLLEGADNVKLFGESI 393 Query: 364 --------PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 +SGH L + +P+ + +HGE + ++G Sbjct: 394 EVQAEICQLTGLSGHADREGLLKWVNSFEPKPKRVFIVHGEDEVENIFAQTLTEQGF-NA 452 Query: 414 PPVRNGKMLRLFPDPIEIIDE 434 NG+ + + + E Sbjct: 453 CAPYNGEQWAIGAEGAVCLKE 473 >gi|293373083|ref|ZP_06619451.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|292631969|gb|EFF50579.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] Length = 267 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKSLKDYNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ +L +++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGNLGEKMNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + + F IES V H + + I D Sbjct: 105 LEKQ--EPMTLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|160884570|ref|ZP_02065573.1| hypothetical protein BACOVA_02555 [Bacteroides ovatus ATCC 8483] gi|237718568|ref|ZP_04549049.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174894|ref|ZP_05761306.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. D2] gi|299145869|ref|ZP_07038937.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_23] gi|315923138|ref|ZP_07919378.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110309|gb|EDO12054.1| hypothetical protein BACOVA_02555 [Bacteroides ovatus ATCC 8483] gi|229452028|gb|EEO57819.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298516360|gb|EFI40241.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_23] gi|313697013|gb|EFS33848.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 267 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVKFISLASGSSG----NCYYLGTETYG----ILIDAGIGIRT-----IKKSLKDYNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 ++ A+FITH H DH A+ +L +++PVY + G+ + + E++S + Sbjct: 48 ---MDSIRAVFITHDHADHIKAVGNLGEKMNIPVYTTARIHAGINRSYCMTEKLSSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + + F IES V H + + I D Sbjct: 105 LEKQ--EPMTLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|302671601|ref|YP_003831561.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302396074|gb|ADL34979.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 453 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 70/436 (16%), Positives = 129/436 (29%), Gaps = 74/436 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK----ERKNL 68 G +IG I+ID G P P D I + E + Sbjct: 9 GSDQIGG----IVTEITKGDHRILIDLGADLPGTKNP----ALSDDELIKRVFAGEGDTI 60 Query: 69 --MAIFITHAHEDHYGALHDLWSFL--HVPVY--ASP----FAIG----LLEAKRVYERV 114 A+ TH H DH G L +P+Y + I LL K Sbjct: 61 HTDAVLFTHYHGDHVG----LRGKAPEGIPMYIGGTAKEIMETIAMRVDLLNKKLCKNAP 116 Query: 115 SKKIPCISFQAG----DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 S+ + D + + +HS ++ VI I++TGD++ D Sbjct: 117 SQMETINRMEPYWKLGSSRDFSGIKVTPLVCDHSAIDSYMFVIELNGKKILYTGDFR-DH 175 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-----EGTCISEKGIKKNIYDIMKNAK 225 D +S+ I L+ + T R SE + K +I K Sbjct: 176 GIPGQDTF--ESMIKRYVGKIDVLVTEGTMISRLEETGNNPIKSEDDLGKRASEIFAEHK 233 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 V++ + S+++ + + + V+++AI D+ Sbjct: 234 ENVVLVS-STNLDSVMEFYHATPADKVFLCDAYQA--EVMNIAIKSRSRFFDKYRYKKCI 290 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 + L P + + ++ L + + +R +A+G Sbjct: 291 YVLCPDNNSFYMKNLEGVRNPVTKRRCFEMANEDIYLDKG--FVMLARPNNNPNMAVGRF 348 Query: 346 KNRLVEQGVRVIAEDA---------------------------ECPVHVSGHPYPNDLKR 378 + R+ + I +H SGH Y + + Sbjct: 349 EERMKKMKDPFITYSMWTGYLEDGKAPDANIVRFLEGKNDKAHMEILHTSGHAYVETIAK 408 Query: 379 MYQWIRPQVLVAIHGE 394 + + P ++ +H E Sbjct: 409 LMELTNPDKIIPMHTE 424 >gi|145589543|ref|YP_001156140.1| RNA-metabolising metallo-beta-lactamase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047949|gb|ABP34576.1| RNA-metabolising metallo-beta-lactamase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 471 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 66/473 (13%), Positives = 141/473 (29%), Gaps = 89/473 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G GE+ + + M+D G+ F G + ++ + Sbjct: 1 MKIQFF--GAAGEVTGSRHSVEVMLSGKPRHFMVDYGL-FQG----GREANTKNLEPLPF 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------------- 106 K++ + +THAH DH G L L + +Y +P LL+ Sbjct: 54 AAKDIEFVVLTHAHIDHSGLLPRLCAQGFKGSIYCTPATYELLKILLPDSAHLQLADLER 113 Query: 107 --AKRVYERVSKKIPC---------ISFQAGDKVDVG-------AFSIESVRVNHSIPET 148 K + ++P ++ + V+ G +E H I + Sbjct: 114 AERKMKMGKWRGEMPFALYSREEVEMTLAQFETVEYGQIHEITPGIKLEFRNAGH-ILGS 172 Query: 149 MALVIRSPVG-----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 V+ V +GD + + + D D + ++ +ST R Sbjct: 173 AIAVLDIQEDGAQKKRCVFSGDIGMKGKVL---MPDPDLISE-----ADVVLIESTYGDR 224 Query: 204 EGTCISEKGIKKNIYDIM---KNAKGCVLVTTFSSSVSRIRSIIDIA------EQIGRKI 254 +SE + + +++ AKG +++ F+ V R + I+ + E++ Sbjct: 225 LHRSLSETE--EELVEVISSTMAAKGNIVIPAFA--VGRTQEILFLLIDLVRKEKLPHLA 280 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-------- 306 + + S + + + D + + E L + E + Sbjct: 281 IWVDSPMATAATHLTHHFFSQLDAQSQATFQWFQNHPEALDLRFIADVEESKALNKIKGG 340 Query: 307 ------SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 S + R + + +++ + + Sbjct: 341 AIIISASGMCDAGRIVHHLANNLPRSQNAVIITGFQAYGSLGRQLVDKVEKVRLFGEEVL 400 Query: 361 AECPVHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + +H S H L + + P + +HGEP A Sbjct: 401 VKASIHTIGGLSAHADQAGLLDWLRGFKKPPSKVFVVHGEPESSTAFASCIRD 453 >gi|56459639|ref|YP_154920.1| beta-lactamase fold exonuclease [Idiomarina loihiensis L2TR] gi|56178649|gb|AAV81371.1| Predicted exonuclease of the beta-lactamase fold [Idiomarina loihiensis L2TR] Length = 463 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 86/254 (33%), Gaps = 56/254 (22%) Query: 30 SSRKWIMIDCGVSFPKDDLPG---------VDLVFPDITFIMKERKNLMAIFITHAHEDH 80 S +++DCG+ F + G +D DI+ + A+ +TH H DH Sbjct: 22 DSDHSLLVDCGL-FQGAETSGSGANSNAQEIDF---DIS-------KVQALVVTHCHIDH 70 Query: 81 YGALHDLW-SFLHVPVYASPFAIGL----LEAKRV-----------------YERVSKKI 118 G L L + P+Y + L +E + ++ Sbjct: 71 VGRLPWLLIAGFVGPIYCTKATALLLPLVIEDALKIGLTRNAQIIDAVIARLHRQLRPTA 130 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS--PVGNIVHTGDWKLDDDAILGD 176 + + F + + H I + + I + +V +GD + +L D Sbjct: 131 YDKWIELPTEFASERFKLRFRQAGH-ILGSAYVEIENVSTHYRVVFSGDLGCKNTPLLPD 189 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSS 235 T + L+ +ST + ++ + K + + KG +L+ FS Sbjct: 190 PTPLER--------ADFLLLESTYGDKNHESRIDRSQRLKAVVERCVENKGVILIPAFS- 240 Query: 236 SVSRIRSIIDIAEQ 249 + R + ++ E Sbjct: 241 -IGRTQELLYELED 253 >gi|15598810|ref|NP_252304.1| hypothetical protein PA3614 [Pseudomonas aeruginosa PAO1] gi|9949771|gb|AAG07002.1|AE004781_10 hypothetical protein PA3614 [Pseudomonas aeruginosa PAO1] Length = 467 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 72/486 (14%), Positives = 137/486 (28%), Gaps = 97/486 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLM 69 LG E+ + L ++++CG+ + + G FP ++ Sbjct: 7 LGAAQEVTGSCYLLETLDGVK---VLLECGMRQGRREADNGNRAPFP-FD-----PASID 57 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERVSK 116 A+ I+HAH DH G L L + P++A+ LLE R Sbjct: 58 AVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSAHIQEKDAEWENRWRN 117 Query: 117 KIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMALVIRSP 156 +I S + + +G + H I + + ++ Sbjct: 118 RIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFHNAGH-ILGSSIVEVQFH 176 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 +V +GD ++ + +M +ST R+ ++ Sbjct: 177 DQVQPRRLVFSGDLGNTCSPLMRAPSPLSR--------ADVVMLESTYGDRDHRDSNDTL 228 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 I D G VL+ +F+ V R + ++ + G ++ V + + Sbjct: 229 EELAAILDQAHRDGGNVLIPSFA--VGRTQDLLYYLGRF----YQEGRLPQQAVFLDSPM 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--AQLSRGEMRNVKLAEKDTVI 329 F RE + T E L + + M ++ +I Sbjct: 283 AARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINRIKSGAVII 342 Query: 330 FSSRAIPGNEVAIG-------------------------HIKNRLVEQGVRVIAEDAECP 364 S G + +I + V + Sbjct: 343 AGSGMCTGGRIVHHFKHNLWRPECHVVFPGFQARGTLGRNIVDGASAVRVFHQRIAVKAQ 402 Query: 365 VHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H S H + L RP L IHGE + A + + Sbjct: 403 IHTLGGFSAHAGQSQLLDWVGHFAHRP-ALYLIHGEREKMEALQSAIRERLDWDAEIPEP 461 Query: 419 GKMLRL 424 G+ + + Sbjct: 462 GERIEI 467 >gi|332526357|ref|ZP_08402483.1| metallo-beta-lactamase family protein [Rubrivivax benzoatilyticus JA2] gi|332110493|gb|EGJ10816.1| metallo-beta-lactamase family protein [Rubrivivax benzoatilyticus JA2] Length = 451 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 69/456 (15%), Positives = 136/456 (29%), Gaps = 108/456 (23%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE------ 64 LG + + + + +++DCG+ F + + Sbjct: 6 LGAADSVTGS----RHRVDLGGQRLLLDCGL-FQG------------FKVLRERNWQTPP 48 Query: 65 --RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVS 115 + A+ ++HAH DH G L L +YASP L E AK E Sbjct: 49 QALLDAEAVVLSHAHMDHSGYLPALVKHGWKGRIYASPATCALAEVLLLDSAKLQEEDAR 108 Query: 116 KKIPC------------------------ISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 + G VG+ ++ V H + A+ Sbjct: 109 RANKFGYSRHEKALPLYTRADAARAIQRLTPVDTGSAFKVGSVAVTLTPVGH-LLGACAV 167 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 + +V +GD D ++ +L L+ +ST R ++ Sbjct: 168 TLDCRGERLVFSGDVGRSVDLLMPP---PQALPE-----ADVLLVESTYGNRAHE---QE 216 Query: 212 GIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGR---------------- 252 + + +I++ G VL+ TF+ V R ++++ + ++ R Sbjct: 217 DVAARLGEIVRETVRRGGSVLMPTFA--VGRAQALMVVLHRLKRAGQIPKDLPIFLDSPM 274 Query: 253 --KIVLLGSSLKRVVSV--AIDVGIIKKDQLFLSDESFGLYPREQ--LIVIATGSQGEPR 306 + L +V+ V A + ++ + + + ++++ Sbjct: 275 AVQATELYRRFAKVLRVKPAELKAACEGVRMVETPQQSMRLTSHRFPCVILSASGMATGG 334 Query: 307 SALAQL----SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 L L + V + +R + G I V V Sbjct: 335 RVLHHLKAMAPSPQHHVVFPGFQVGGSRGARLVAG--ATEVKIHGEYVPVRCEVSH---- 388 Query: 363 CPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 SGH ++L + P+ +HGEP Sbjct: 389 -LEGFSGHADSDELMDWLRTTPKAPRQTFVVHGEPD 423 >gi|226945896|ref|YP_002800969.1| RNA-metabolising metallo-beta-lactamase family protein [Azotobacter vinelandii DJ] gi|226720823|gb|ACO79994.1| RNA-metabolising metallo-beta-lactamase family protein [Azotobacter vinelandii DJ] Length = 468 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 66/482 (13%), Positives = 132/482 (27%), Gaps = 92/482 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDITFIMKERKNLM 69 LG + E+ + L ++++CG+ + V+ +L Sbjct: 7 LGAIQEVTGSCYLVE---TRDGSRVLLECGMRQGGRREEEEVNARPFPFD-----PGSLD 58 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP--------- 119 A+ I+HAH DH G L L + P++A+ L+ + ++ Sbjct: 59 AVVISHAHIDHSGLLPRLAAAGYRGPIFATEATCELMNLMLLDAAHLQENDAAWENKWRA 118 Query: 120 ----------------------CISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSP 156 C G ++V + H I + + + Sbjct: 119 RLGKPPVQPLYTTADAEKALSLCRPQPYGAALEVAPGVIVTFHPAGH-ILGSAIVEMELH 177 Query: 157 VGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 + +V +GD ++ D T ++ +ST R E Sbjct: 178 DHHLTRRLVFSGDLGNTCTPLMRDPTPLSR--------ADVVLLESTYGDRNHRNSEETL 229 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKR 263 I G VL+ +F+ V R + ++ + + +++ Sbjct: 230 EEFAEILQKAHRDGGNVLIPSFA--VGRTQDLLFYLGRFYQEGRLPQQAVFLDSPMAIRA 287 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG-------- 315 A L + L V+ E A+ ++ G Sbjct: 288 NAIYARFAEEFDPLDRDLLRAKGVKRAEDWLPVLRMTPTPEESMAINRIKSGAIIIAGSG 347 Query: 316 --------EMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 L ++ ++F G I + V VH Sbjct: 348 MCTGGRIVHHFKHNLWRQECHLVFPGFQAQG--TLGRRIVDGAGSVKVLHQRIAVRAQVH 405 Query: 367 V----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 S H + L Q P+ L +HGE ++ ++ + G+ Sbjct: 406 TLGGFSAHAGQSQLIDWVQHFDHHPE-LYLVHGEREKMLVLQQTLHERLNWTATIPERGE 464 Query: 421 ML 422 + Sbjct: 465 QI 466 >gi|256962722|ref|ZP_05566893.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|307272683|ref|ZP_07553931.1| hypothetical protein HMPREF9514_01445 [Enterococcus faecalis TX0855] gi|256953218|gb|EEU69850.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|306510678|gb|EFM79700.1| hypothetical protein HMPREF9514_01445 [Enterococcus faecalis TX0855] Length = 429 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV---------YERVSKKIPC 120 A+F++HAH DH ++ L VP+Y +L + +E + Sbjct: 87 AVFLSHAHLDHSRMINYL--DPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFIREM 144 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I D + VG S+E V V+H AL+IR+P I +TGD +L + Sbjct: 145 IGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFC 204 Query: 181 DSLCA---IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSS 236 + + EG+ + + +SE+ + +++ + ++N + + ++ Sbjct: 205 EKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPAN 264 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLI 295 V R II+ + R +VL + ++ V I+V + + + + L + Sbjct: 265 VERFAKIIE---KSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTL 321 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGV 354 + + L Q+ L E I S ++ + + + L ++ + Sbjct: 322 L------KDKTDYLWQVVNQFD---NLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDI 372 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + SGH P DL ++ I PQVLV IH Sbjct: 373 TFV------RLACSGHAIPEDLDKIIALIEPQVLVPIHT 405 >gi|29346232|ref|NP_809735.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|253568335|ref|ZP_04845746.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 1_1_6] gi|298385610|ref|ZP_06995168.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 1_1_14] gi|29338127|gb|AAO75929.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|251842408|gb|EES70488.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 1_1_6] gi|298261751|gb|EFI04617.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 1_1_14] Length = 267 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + I+ID G+ + D + Sbjct: 1 MKVRFISLASGSSG----NCYYLGTDTYG----ILIDAGIGIRT-----IKKTLKDFNIL 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 M+ ++ A+F+TH H DH A+ L +++PVY + G+ + + E++S + Sbjct: 48 ME---SIRAVFVTHDHADHIKAVGHLGEKMNIPVYTTARIHEGINRSYCMTEKLSTSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q ++ F IES V H + + I D Sbjct: 105 LEKQVPMMLE--DFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|307727886|ref|YP_003911099.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1003] gi|307588411|gb|ADN61808.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1003] Length = 490 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 82/276 (29%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + I+IDCG+ F +L + + Sbjct: 1 MKLTFLGAAETVTGSRYLLE----GAGLRILIDCGL-FQGTK----NLRLRNWNPFPVDI 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 L A+ +THAH DH G L L PVY + L + A+ E + Sbjct: 52 GTLDAVILTHAHLDHSGYLPVLARMGYRGPVYCTRGTRDLCQIMLRDSARLQEEEAAYAN 111 Query: 119 PCISFQAGDKVDVGAFS-------------------------IESVRVNHSIPETMALVI 153 + + + + H I ++V+ Sbjct: 112 RHGLSKHHPALPLYTIDDAEQALERLDALDFDVPKQLNEHACFRLLPAGH-ILGAASVVL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I +GD DD I+ L+ +ST R T Sbjct: 171 CMEGKVIAFSGDIGRPDDPIMRPPMPLA--------HTDYLIVESTYGDRLHTKTDAATE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 I+ G V++ F+ V R ++I+ Q Sbjct: 223 LAEIFAATFRRGGVVVIPCFA--VGRAQAILHYIAQ 256 >gi|325982482|ref|YP_004294884.1| beta-Casp domain [Nitrosomonas sp. AL212] gi|325532001|gb|ADZ26722.1| Beta-Casp domain [Nitrosomonas sp. AL212] Length = 465 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 130/442 (29%), Gaps = 70/442 (15%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG GE+ + L G+ ++DCG F G + + T + K + Sbjct: 6 LGAAGEVTGSSYLIETGTVK----FLVDCG-MFQG----GREADKKNRTAFKFDPKTVDF 56 Query: 71 IFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + +THAH DH G L L + PVY + LL K Sbjct: 57 VLLTHAHIDHSGLLPRLSAWGFRGPVYCTAATADLLHVMLKDSAYIQEKEIEWRNKSRRR 116 Query: 122 SFQAGDKVDVGAFS------IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 S D + + + +++ I + IR + H + + I Sbjct: 117 SQFPQDLAPLYTVTQAEVLLKQLHHIDYDIEISPHPTIRCCFRDAGHILGSSIIEVWIK- 175 Query: 176 DVTDKDSLCAIGNEG---------------ILALMCDSTNAMREGTCISEK--GIKKNIY 218 T + + G+ G L+ +ST R +++ + I Sbjct: 176 QPTGQKKIVFSGDLGQPGHPVVRDPAVIRQADVLLIESTYGNRLHRNMTDTLDELVHAIN 235 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSSLKRVVSVAIDVG 272 D + G V++ F+ V R + I+ + ++G + + S + R + Sbjct: 236 DTLIQKGGNVIIPAFT--VGRTQDILFLLVDLYRQGRLGDMEIYVDSPMARAATEITLQH 293 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------SALAQLSRGEMR 318 + DQ + + ++ + E S + R + Sbjct: 294 LAVLDQESANALQWISDSAQKPRIHFVQDIEESMQLNHIKRGIIIISASGMCDAGRIKHH 353 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPN 374 + + + + + ++ S H Sbjct: 354 LKYNLGRPECSILITGFQAARTLGRRLVDGARQVNIFGQEVRVRATIYTIGGLSAHADQA 413 Query: 375 DLKRMYQWIR--PQVLVAIHGE 394 DL + P+ + +HGE Sbjct: 414 DLFNWLGHFQKMPEKIYVVHGE 435 >gi|153853269|ref|ZP_01994678.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] gi|149754055|gb|EDM63986.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] Length = 265 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 13/164 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + +++D G+S + ++ + + L I ITH H Sbjct: 12 GNCIYVG----DDQTHLLVDTGIS--------KKRIEEGLSKLEIKGDELEGILITHEHV 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+P I + + + +G +I+ Sbjct: 60 DHIQGLGVFSRKYEIPIYATPGTIEGIRN-CKSLGKLPEGLLHEIEIEHPFSLGTLNIDP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++H E I + ++ D + DD + ++D ++ Sbjct: 119 FAISHDANEPSGYRIENGKKSVAVATDLGVYDDYTVEHLSDLNA 162 >gi|222870690|gb|EEF07821.1| predicted protein [Populus trichocarpa] Length = 332 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 90/295 (30%), Gaps = 63/295 (21%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + +L F LG E+ + L ++ ++DCG+ G + Sbjct: 33 RPMKLSF--LGAAREVTGSCFLVE----AANVRFLVDCGMV-----QGGRVAAARNYEPF 81 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------------- 106 + ++ + +THAH DH G L L P+YA+P + LL Sbjct: 82 AFDPASIDFVLLTHAHIDHSGLLPKLTRAGFKGPIYATPATVDLLGVMLPDSAHIQESDA 141 Query: 107 ---AKRVYERVSKKIPCISFQAGDKV-------------DVGAFSIESVRVNHSIPETMA 150 AKR E+ + + H I + Sbjct: 142 KRVAKRFKEKTVPPPLYTLQDTHECLQQVRGIEYDREFAPRVGVRARFRDAGH-ILGSAI 200 Query: 151 LVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG- 205 + + IV +GD IL D T E L+ +ST R Sbjct: 201 VEVWITEYGYPTKIVFSGDLGQPGRPILRDPT--------PIEDADILVIESTYGDRRHK 252 Query: 206 -TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 +E + + + G V+V F+ V R + ++ + + G Sbjct: 253 DFSATEADMIGIVEKTLFERGGNVIVPAFA--VGRTQEVLYHLHR----LTCEGR 301 >gi|330446617|ref|ZP_08310269.1| metallo-beta-lactamase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490808|dbj|GAA04766.1| metallo-beta-lactamase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 458 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 41/247 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++IDCG+ + + DI K++ A+ +TH+H DH G + Sbjct: 16 CHELMIGKSSLLIDCGLFQGAEAKHQQLNIEFDI-------KHIEALLVTHSHIDHIGRI 68 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRVY-----------------ERVSKKIPCISFQAG 126 L + P+YA+ LL + + +KI + + Sbjct: 69 PWLLAAGFSGPIYATEATAALLPLMLEDGLKIQLGFNEKQCQQFTQLIKQKIRPVPYDCW 128 Query: 127 DKVDV---GAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDWKLDDDAILGDVTDKDS 182 K+ + + S+ + H I + + IR P +V +GD + +L D Sbjct: 129 AKLVLLNGESVSVRFRQAGH-ILGSAYIEIRLPDQRTVVFSGDLGPSNTPLLSDP----- 182 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIR 241 I L+ +ST + + E+ + + + + G +L+ FS V R + Sbjct: 183 ---ISPSSADVLVLESTYGDKPHHDVIERESQLRQLIEHSLRDGGAILIPAFS--VGRTQ 237 Query: 242 SIIDIAE 248 ++ E Sbjct: 238 ELLFDIE 244 >gi|291527053|emb|CBK92639.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale M104/1] Length = 267 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 17/167 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + ++ID G+S ++ L D+ D+ I +TH Sbjct: 13 GNCICVG----TDDCHVLIDAGISGKKIENGLNEFDMTATDMQ----------GILVTHE 58 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + H+P+YA+ IG ++ +AG +G Sbjct: 59 HIDHIAGLGVMARRYHIPIYATKATIGAIKCT-KSVGNIDDELFHPVEAGVDFTIGDIEF 117 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 E + ++H + +A ++ + D DDA++ + + D L Sbjct: 118 EPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGL 164 >gi|187928791|ref|YP_001899278.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12J] gi|241114316|ref|YP_002973791.1| beta-lactamase domain protein [Ralstonia pickettii 12D] gi|309783428|ref|ZP_07678134.1| metallo-beta-lactamase family protein [Ralstonia sp. 5_7_47FAA] gi|187725681|gb|ACD26846.1| beta-lactamase domain protein [Ralstonia pickettii 12J] gi|240868889|gb|ACS66547.1| beta-lactamase domain protein [Ralstonia pickettii 12D] gi|308917827|gb|EFP63518.1| metallo-beta-lactamase family protein [Ralstonia sp. 5_7_47FAA] Length = 454 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 62/456 (13%), Positives = 130/456 (28%), Gaps = 97/456 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G G + + L + + +++DCG+ F + + Sbjct: 1 MKLSFH--GAAGTVTGSKYLVEH----QGQRLLVDCGL-FQGYKQL----RLLNWEPLPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSK 116 ++ A+ +TH+H DH GAL L + A+P I L + E + Sbjct: 50 SAADIDAVVLTHSHLDHAGALPLLVKQGFRGRILATPSTIELCGLLLPDSGRIQEEDAAY 109 Query: 117 KIPCISFQA---------------GDKVDVGAFS---------IESVRVNHSIPETMALV 152 + + +++ F ++R I + Sbjct: 110 ANRHHTSKHATALPLYTEDDARRAMEQLHRLPFDQCVDVVPDVTVTLRPAGHILGAASAE 169 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--E 210 + + ++ +GD D ++ +ST R + + Sbjct: 170 LTAGQTTVLFSGDVG--------RPDDPVMRAPAPAPKADYIVVESTYGDRLHEPVPNAQ 221 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR-------------------------SIID 245 + + I + G V++ F+ V R + ID Sbjct: 222 AVLGEAIAR-TAHRGGMVVIPAFA--VGRAQLLLHLIHKLKQQGAIPDLPVFLDSPMAID 278 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 E R SL+ + + +I+ + + L ++I+ Sbjct: 279 ATEIYHRHHAEHKLSLEDCLGMYKAARMIRTPEESRALAGLAL----PAVIISASGMATG 334 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L L +++ ++T+I + G ++ + V Sbjct: 335 GRVLHHL-----KHLAPDRRNTIILAGYQAGG--TRGARLQAGERSLRIHGEDVAVRAEV 387 Query: 366 HV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 S H + L P+ + HGEP Sbjct: 388 ISLQGMSAHADASQLIEWLGSAPAAPRSVFVTHGEP 423 >gi|189218658|ref|YP_001939299.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] gi|189185516|gb|ACD82701.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] Length = 246 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 10/140 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + I+ID G+ + + ++ + +++ A+FITH H DH L L Sbjct: 3 ETPNSRILIDPGIRY--------KKIIRHLSAMNVPVESIKAVFITHEHTDHVAGLPILL 54 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 + P+Y + L+ E K + F++G + + IES + H + Sbjct: 55 KKMPFPLYCNTLTWKALKKSMGLE--DKAVDWRPFESGSRYLLDEIEIESFPIPHDAADP 112 Query: 149 MALVIRSPVGNIVHTGDWKL 168 + + G I D Sbjct: 113 VGFLFHHHRGTIGLLTDLGY 132 >gi|170290968|ref|YP_001737784.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175048|gb|ACB08101.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 432 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 141/449 (31%), Gaps = 80/449 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG IG + +P I++D GV P + R + A+ Sbjct: 2 GGARSIGRSSVEIICRNP-----IILDSGVDVGASSNL-----LP-----SEPRSDPEAL 46 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY----------------ERVS 115 +THAH DHYGA + Y +P + + E + Sbjct: 47 ILTHAHLDHYGASPLILRRWGCDTYVTPPTVDVGEVLLKDFVSLSSEYAERPYSIQDIQL 106 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + S + D V + + + + H + M + +I++TGD L Sbjct: 107 IRRREKSVRLNDYVALDGWELRTFNAGHVLGSIMIHLTAVDGPSILYTGDINTAGTRTL- 165 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN---AKGCVLVTT 232 + L+ + T + S K +++ + ++N + G ++ T Sbjct: 166 ------RGAETELPKVDYLIIEGTYGGDDDIHPSRKKVERQFIEDIRNVIASGGVTIIPT 219 Query: 233 FSSSVSRIRSII------------------------DIAEQIGRKIVLLGSSLKRVVSVA 268 F+ + R + ++ +I++ L L+R++ + Sbjct: 220 FA--LGRAQEVLLTLISHMESGVLQEVPIFVDGMIREISKYYNAYWSWLRPELQRMIRES 277 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + + + L E I++ T + L L ++ + + Sbjct: 278 KRGLFDHRAIEEVRNREELLEISEPFIIVTTSGMLQGGPVLTYL-----KHFGTKRGNLI 332 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH---VSGHPYPNDLKRMYQWI-- 383 + + G + + + + + + + V S H +L + Sbjct: 333 YLTGYQVRG--TRGRMLLDGIRQIPMPDGIIEVKSDVKFADFSAHADQPNLINFITKVAG 390 Query: 384 -RPQVLVAIHGEPLHLVAHKELALQEGIA 411 + ++ +HGEP L+ + GI Sbjct: 391 RGLKEVILVHGEPDKLIQLRRKLEARGIR 419 >gi|229917481|ref|YP_002886127.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229468910|gb|ACQ70682.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 263 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 13/169 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + R +++D G++ I I + + A+ +TH H DH + L Sbjct: 19 IETERTKLLVDAGLTGKAMQQ--------RIEAIGRSFDGIDALLVTHEHSDHIKGVGIL 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +E+ + GD G IE+ V+H + Sbjct: 71 ARKYNLPIYANAKTWAAMESLI---GKIDPALKFQIEVGDVKQFGDIEIETFNVSHDAAD 127 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 M + H D + D + D + + +L + Sbjct: 128 PMFYQFAHDGKRLAHITDTGYVSDRMKGIIRGADDFIFESNHDVSMLQM 176 >gi|126179838|ref|YP_001047803.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862632|gb|ABN57821.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 261 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 58/162 (35%), Gaps = 20/162 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL L G G N R ++ID G+S ++ L ++ D TFI Sbjct: 1 MELTVLASGSKG----NCTYLR----GERGALLIDAGLS-AREILRRLEAAGGDPTFIE- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 AI +TH H DH + L L VPVYA+ + K + Sbjct: 51 ------AILVTHEHIDHIRGVDVLARRLGVPVYATGGTLEAFTPKCS----GRSAEVRRC 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ VG FSIE +H E + I D Sbjct: 101 RCGETFSVGDFSIEPFAASHDAREPCGFSVAEGDLRIGCCTD 142 >gi|168335418|ref|ZP_02693509.1| beta-lactamase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 263 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 18/177 (10%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + +L L G G N G I++D G+S V V + I Sbjct: 2 DMKLCILASGSKG----NCTYIKAGKAR----ILVDIGIS--------VTQVIAKLKQIG 45 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ++ AIFITH H+DH + P+YA+ ++ AK + +V+ I Sbjct: 46 VDPVDITAIFITHEHDDHIKGVGFFSRKFGTPIYATQKTWDVILAKELMGKVTN--IKII 103 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 A + I++ ++H + + V + I + D D I+ +++D Sbjct: 104 DVAVPVLIANVLRIKAFSISHDTVDPVGYVFNTTTKKIGYLTDCGTIDQNIVSELSD 160 >gi|189485716|ref|YP_001956657.1| RNA-metabolising metallo-beta-lactamase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287675|dbj|BAG14196.1| RNA-metabolising metallo-beta-lactamase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 529 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 8/146 (5%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP--GVDLVFPDITFIMK 63 + P G + + L + +IDCG+ P++ G ++ I Sbjct: 22 VSVTPYGAASTVSGSCFLLE----TENSKFLIDCGLFMPEESGSAGGETAKLKNLR-IQD 76 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 E A+F+THAH DH G + L +Y++ L I Sbjct: 77 ELIEAEALFLTHAHLDHSGRIPLLIHRGFKGKIYSTQATKELALTLFKERNGFDLIERKW 136 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPET 148 F + + + ++ V H + Sbjct: 137 FWSKSQREKARYANNGKVVAHWTDDC 162 >gi|87199619|ref|YP_496876.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135300|gb|ABD26042.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 535 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 89/269 (33%), Gaps = 56/269 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + + G +++DCG+ L ++ D + + Sbjct: 9 GAARTVTGSCFEFVLGDMR----LLVDCGLFQGSRSLEALNHEPLDFD-----VHKIDGV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----------- 119 +THAH DH G L L + P++ +P LL+ ++ Sbjct: 60 IVTHAHIDHSGLLPRLAAEGYEGPIWCTPETAALLKVMLADAGRIQESEAERRNRRRDRA 119 Query: 120 --------------------CISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVG 158 + G+ D F H I + ++ + + Sbjct: 120 GEPEFTPIYTEEDASAACSLTRTIPLGEWFDPAPGFRARFWNAGH-ILGSASVELVADGT 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 ++ +GD A D + G ++C+ST R+ ++ + +K + Sbjct: 179 RVMCSGDVGP---ANKAFHPDP-----LTPAGFDHVICESTYGDRKREKVTVEERRKLLE 230 Query: 219 DIMKNAK---GCVLVTTFSSSVSRIRSII 244 + A+ G ++V +F+ + R + ++ Sbjct: 231 AEILAARARGGNLVVPSFA--LERTQELL 257 >gi|297583425|ref|YP_003699205.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297141882|gb|ADH98639.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 396 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 35/196 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + GGV E G + ++ + + +M+DCG+S + + +PD + ++ Sbjct: 1 MNVTSCGGVMEYGRSCFIF----DLAGRTLMVDCGISKSAETILE---RYPDFS--KRDP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+F+THAHEDH L LH PVYAS + Y + + + Sbjct: 52 AEVDAVFVTHAHEDHTLGLPFAVRLGLHAPVYASETT---IRHTLTYFALWRHAAEQTGM 108 Query: 125 AGDKVDVGAFSIES--------------------VRVNHSIPETMALVIRSPV--GNIVH 162 ++ +N P + R PV + Sbjct: 109 TVPYEQSHEDRVDFVSLPSGKGDWQEMLPGVEVLWGLNGHAPGSCWYAFRDPVSLETVFF 168 Query: 163 TGDWKLDDDAILGDVT 178 +GD+ + + + Sbjct: 169 SGDYTMSSVLMPFEWP 184 >gi|297620415|ref|YP_003708552.1| hypothetical protein wcw_0171 [Waddlia chondrophila WSU 86-1044] gi|297375716|gb|ADI37546.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044] Length = 451 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 74/473 (15%), Positives = 133/473 (28%), Gaps = 74/473 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG G + + L ++ I++DCG+ +L G + + Sbjct: 1 MKLRF--LGAAGTVTGSKTLIE----TNDCAILVDCGLFQGYKELRG-----KNWSGFPV 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 + + ++ +THAH DH G L L +YA+P L E Sbjct: 50 SIEKIHSVILTHAHIDHSGYLPILVRDGFKGDIYATPATRDLCEILLRDSARIHEEDARR 109 Query: 112 -----ERVSKKIPCISFQAGDKVDVGAFS---------------IESVRVNHSIPETMAL 151 K + + + F + + R H I + L Sbjct: 110 ANKYGYSKHKPALPLYTEEDAIRCLRQFKSLDLGIDTPLSRSLIVHASRAGH-ILGSAML 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 R+ +V +GD AI+ L+ +ST R ++ Sbjct: 169 TFRTNEETLVFSGDLGRSKSAIMPPPAQIQV--------ADDLILESTYGNRLHPDEDDE 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG----------RKIVLLGSSL 261 I G VL+ F+ V R + ++ + Q+ + Sbjct: 221 QKLGEIIRKTAKRGGVVLIPAFA--VGRTQIVLYLIHQLKAKKQIPDIPIFLDSPMAQDA 278 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE----PRSALAQLSRGEM 317 ++ + + D + Q G S +A+ R Sbjct: 279 TDIMLNYSNEHTLSPDLCRKVCSTAQYVQSAQDSKQLHGKHYPMIIISASGMAEGGRVLH 338 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHP-Y 372 K A I E + + +S H Y Sbjct: 339 HLKKYAPDHHNSIVFVGFQAPMTRGDRILQGAREIKIHGNMVPVRAKIELLETLSSHADY 398 Query: 373 PNDLKRMYQWIR-PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 L + +++ P+ + HGEP L A K+ + V + L Sbjct: 399 QETLSWLKGFVKPPRQVFLNHGEPAALGALKDKIIDTFGWRVTIPSYMDLYEL 451 >gi|302874943|ref|YP_003843576.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] gi|307690439|ref|ZP_07632885.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] gi|302577800|gb|ADL51812.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] Length = 199 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ + LG N L S+ ++ID P DD+ G+ F+ Sbjct: 1 MKIKSVQLGAYQ---TNCYLV--IDESTNDAVIID-----PGDDVNGLK------HFLTS 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-RVYERVSKKIPCIS 122 L AIF+TH H DH + L ++PVY L+ ++ + + ++ Sbjct: 45 ADVQLKAIFLTHGHMDHSLGMPYLVEQYNLPVYLKKEDEELMRENAFIFGYIPENCHIVN 104 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDK 180 GD+++ G S + + P + G I+ GD + + Sbjct: 105 ISDGDELNFGNLSFKVISTPGHSPGGVCF----SSGKILFCGDTLFNSSFGRTDLPGGNY 160 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCIS 209 ++L +L L D+ G + Sbjct: 161 ETLINSIINKLLCLDVDTVAYSGHGPYTT 189 >gi|229578386|ref|YP_002836784.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009100|gb|ACP44862.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] Length = 426 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 67/416 (16%), Positives = 144/416 (34%), Gaps = 30/416 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER------K 66 G EIG N + + ++ D G+ F + + P +K Sbjct: 18 GYKEIGGNFIIIE----NKDNTLVFDQGIRFSRFKKYYNVNIQPSSASELKRLGIIPPSD 73 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIG-LLEAKRVYERVSKKIPCISFQ 124 I+I+H H DH G LH L + +Y +E + + + I Sbjct: 74 EFNKIYISHLHLDHLGVLHLL--NVGTLLYVPDKDTFNQFIEPYKESDNWTAYISPPIGV 131 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD------DDAILGDVT 178 + + ++V HS + + I+++GD +L D + + Sbjct: 132 NVIDIKDNQDGVLPLQVEHSAYPAYSFYYNNGDVRILYSGDLRLSSPLKVADQELHNRIH 191 Query: 179 DKDSLCAIGNEGIL--ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS- 235 +K L G+ L+ + TN + + + + +I ++ V+ + Sbjct: 192 EKTILEEYEERGLDTDVLIIEGTNFSSAISPLQPHYFNEQVNNIFESHSNSVITVSIDPI 251 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + + ++ + ++ G+ V G L ++ S I + D+S ++ Sbjct: 252 DLEELAYLLLVTKEKGKIPVFSGRRLIKMASFWISKFNLIDKAYQFDDKSIEFEIIDEEE 311 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 +I + + L R ++ + VI S E +++ VE Sbjct: 312 IIRSPQDYVIFTVKGNLIDFGRRLSEIIKGSVVISLST-----ESKAESVEDESVEDNWY 366 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL--HLVAHKELALQEG 409 + +SGH YP +L+ + ++I+P+ ++ IH + +L Sbjct: 367 KALGFITYRLRISGHYYPYELRTILEYIKPKKVIPIHTDVPLTMCEYINKLGYSCA 422 >gi|85857919|ref|YP_460121.1| metallo-beta-lactamase protein [Syntrophus aciditrophicus SB] gi|85721010|gb|ABC75953.1| metallo-beta-lactamase protein [Syntrophus aciditrophicus SB] Length = 541 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 71/529 (13%), Positives = 140/529 (26%), Gaps = 99/529 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPG----VDLVFPDIT 59 ++ F LG + + + + IDCG+ +++ V+L P Sbjct: 7 MKIKF--LGAARTVTGSCYILE----TQGHRFAIDCGMHQGNEEIEKRNWNVELYEP--- 57 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA----------- 107 + + ITHAH DH G L L P+YA+ + LL Sbjct: 58 ------EKIEFFLITHAHIDHTGLLPRLVQKGFRGPIYATQPTVDLLRILLLDSAHIQEM 111 Query: 108 ----------KRVYERVSK-----------KIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 + +RV + + + H I Sbjct: 112 EAQWKSRKRLRFGEKRVGPLYTQRDAEAVFPMLKSVSYDKPFEPFPGLKVNFMDAGH-IL 170 Query: 147 ETMALVIRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + L + + V +GD ++ D + L +ST Sbjct: 171 GSSFLELWLKENGVPAKLVFSGDIGRPAQLLMD---DPGIIAE-----ADYLFLESTYGN 222 Query: 203 REGTCISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-----RKIV 255 R + + + I + + V+ + + + + G I Sbjct: 223 RNHKNEQDSLNELAEAIAYSYECRQKMVIPAFAVERTQEMMYCLYLLSKKGQLPKDMPIY 282 Query: 256 LLGSSLKRVVSVAIDVGIIKKD-----------QLFLSDESFGLYPREQLIVIATGSQGE 304 L + + D L L E + + T Sbjct: 283 LDSPLAIQATEIFRRHATFLDDETQALILKGENPLRLPQLRCTQTTEESIAINQTEGPAI 342 Query: 305 PRSALAQLSRGEMRNVKL----AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 SA + G +R+ E +++F G I + + Sbjct: 343 IISASGMANAGRIRHHLRHNLWREGASIVFVGFQAEG--TTGRKIIDGAKRVRILNENVA 400 Query: 361 AECPVHV----SGHPYPNDLKRMYQWIRPQ--VLVAIHGEPL-HLVAHKELALQEGIACV 413 + + S H + L + + +HGE V + + G + Sbjct: 401 VKARIFTIGGFSAHAGQSQLLEWLSHFKNHGLEVFLVHGEYSAQQVLADRIRERFGYKVI 460 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKD-GFLIGKFADLG--IAKRR 459 P + + I+ ++ D +LIG + +R+ Sbjct: 461 IPEYLEETFLKIGEEIKRVEFPEKAAPKIDWAYLIGDLEARMEQLRQRQ 509 >gi|325845763|ref|ZP_08169027.1| metallo-beta-lactamase domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481901|gb|EGC84932.1| metallo-beta-lactamase domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 263 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 I+IDCG S K + ++ I + +L AIF+TH H DH + Sbjct: 18 VEHKGSKILIDCGFSGRKIENL--------LSQIGENPSDLDAIFLTHEHMDHVKGAGVI 69 Query: 88 WSFLHVPVYASPFA-IGLLEA--KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +P+YA+ + ++ K E + F++ ++ +F I + ++H Sbjct: 70 SRRYDIPIYANKGTWLSFIKNAGKLKEENI------KIFRSNSFLNFNSFDIFPISIHHD 123 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 E + ++ I D + DD IL + Sbjct: 124 ANEPVGFILYLDNKKITVLTDTGIIDDRILNE 155 >gi|325185791|emb|CCA20296.1| DNA crosslink repair protein putative [Albugo laibachii Nc14] Length = 662 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 97/331 (29%), Gaps = 42/331 (12%) Query: 72 FITHAHEDH-YGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 F+TH H DH G L +Y S L+ K RV K CI + Sbjct: 339 FLTHFHSDHYIG----LTKKFDAGTIYCSQITANLVMMKL---RVDAKYICIV-AMNTPI 390 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGN-IVHTGDWKLDDDAILG--------DVTDK 180 + + + NH P ++ R +HTGD++ + + + Sbjct: 391 FIHGVEVIFLDANH-CPGACIILFRQKNEMSFLHTGDFRFHPRMLEYPALRPFVDQESTQ 449 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + + + + S + + + + + + T++ + + Sbjct: 450 NEMQRLSGVYLDTTYAKSKFDFAPQEIVIKHVVG-LMEKHYSTQRQMYIFGTYT--IGKE 506 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R +++A+ G+K+ + + + D + D F + P L Sbjct: 507 RVFMEVAKHFGKKMCVSKEKFRVLSCYGWDKEDMDFITTDSGDTCFFVMPMHSLR----- 561 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 L S R V + A L + Sbjct: 562 -MDRLSGLLRSYSNRFDRVVAFRPTGWTFQGANAS-------------LSKLQKDASDRF 607 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++L + + +P+ ++ Sbjct: 608 RVYGIPYSEHSSFSELCQFVKAFKPKTIIPT 638 >gi|333030828|ref|ZP_08458889.1| beta-lactamase domain protein [Bacteroides coprosuis DSM 18011] gi|332741425|gb|EGJ71907.1| beta-lactamase domain protein [Bacteroides coprosuis DSM 18011] Length = 267 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 15/162 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F+ LG G G N G + I+ID G+S V + + I Sbjct: 1 MKVQFISLG-SGSSG-NCYYLGTPNYG----ILIDAGIS--------VRAIRKALREINV 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + AIFITH H DH + L L++PVY++ + R Sbjct: 47 GMEMIHAIFITHDHADHIKGVGHLGEKLNIPVYSTQKVHEGISKNRCMHEPLGHCVRYLE 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ F I S V H + + I D Sbjct: 107 KE-QPFELNDFHIISFEVPHDGTDNVGYCIEIDGKVFTFATD 147 >gi|168186952|ref|ZP_02621587.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] gi|169295054|gb|EDS77187.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] Length = 262 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 21/208 (10%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I+ID G+ PG + + I K + IF+TH H DH + L ++P Sbjct: 24 ILIDAGL-------PG-KHIEKALQSINKNPNEIDGIFVTHEHIDHVKGVGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ ++ K+ G + + I + ++H + + + Sbjct: 76 IYANELTW---KSMNKNIGKIKEENINIISKGANITIKDIDIFNYSISHDAVDPVGYSVY 132 Query: 155 SPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 S + D + D+ D L + + +L ++ Sbjct: 133 SGKSKVCVATDLGYFSDEVRENTKDADVVLLESNHDVEMLKF--------GPYPYSLKRR 184 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 I N+ + + G +VT ++ I Sbjct: 185 ILSNVGHLSNDDCGKAIVTMTENNCKNI 212 >gi|297587564|ref|ZP_06946208.1| beta-lactamase [Finegoldia magna ATCC 53516] gi|297574253|gb|EFH92973.1| beta-lactamase [Finegoldia magna ATCC 53516] Length = 277 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 11/171 (6%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I+ID G S + + +I + L AIF+TH H DH + L Sbjct: 19 IETEHSKILIDAGFSGKTIENL--------LKYINVDPSKLDAIFVTHEHADHIKGIGVL 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+ A+ ++ K F+ ++ I ++ +H Sbjct: 71 SRRYDLPIIANAETWYAMDNKI---GKINDKNIYVFENNRHINFKDLDILPIKTSHDSAN 127 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + VI + D + +D++ ++ D + N + L S Sbjct: 128 SCGYVISKDDKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDVDMLKYGS 178 >gi|223936794|ref|ZP_03628704.1| beta-lactamase domain protein [bacterium Ellin514] gi|223894645|gb|EEF61096.1| beta-lactamase domain protein [bacterium Ellin514] Length = 305 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G + L + I+ID G S V + + I + + L I Sbjct: 31 GSGSSGNSAYL-----ETEDARILIDAGFS--------VRQIRQRLATIGRAPEGLSGIL 77 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH L L + L++PVY + + + K+ C F G ++G Sbjct: 78 ITHEHTDHINGLLGLATKLNIPVYCNRLTKDAI-----EYQFQTKLDCRIFGTGSSFELG 132 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 IE+ + H + + +R+ G I D Sbjct: 133 DVIIETFSIPHDASDPVGFFMRTTAGQIGFLTD 165 >gi|56965852|ref|YP_177586.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] gi|56912098|dbj|BAD66626.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] Length = 264 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 11/141 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++ + ++ID G++ K D I + K++ A+ +TH H DH + Sbjct: 19 VETASQRLLIDAGLTGKKLDEL--------FQKIDRNPKDIDALLVTHEHSDHIKGVGVF 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 VP+YA+ +E + + +K F G +ES V+H E Sbjct: 71 ARKHQVPIYANAKTWKAMEKQLGQLSLDQK---FEFGRETVKQFGDIEVESFGVSHDAAE 127 Query: 148 TMALVIRSPVGNIVHTGDWKL 168 M V R +V D Sbjct: 128 PMFFVFRHEGKKLVLATDMGY 148 >gi|68077031|ref|XP_680435.1| cleavage and polyadenylation specificity factor protein [Plasmodium berghei strain ANKA] gi|56501360|emb|CAH96636.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium berghei] Length = 967 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 75/527 (14%), Positives = 150/527 (28%), Gaps = 125/527 (23%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPK-------- 45 + LG +G + + + IM DCG +P Sbjct: 6 NQTTVYIKVLGAGQTVGRSCVIVE----LENRRIMFDCGSHVGYKDERKYPNFNLLVGNS 61 Query: 46 --DDLPGVD---------------LVFPDITFIMKERKNL----MAIFITHAHEDHYGAL 84 + P +D D ++ K + + I+H H DH GAL Sbjct: 62 NLEGAPKIDEENNLNVEVNISIVNSNIADKEKLINNLKKINEMIDCVIISHFHMDHIGAL 121 Query: 85 HDLWS--FLHVPVYASPFAIGL----------LEAKRVYERVSKKIPCISF--------- 123 + S L + + ++ +K + Sbjct: 122 PFFTEILQYKGTIIMSYPTKALSPVLLLDGCKISDMKWEKKNLEKQIKMLNEKSDDLLNY 181 Query: 124 ---------------------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 Q + ++G SI H + + Sbjct: 182 NINCLKKDPWNITEENIYNCINKVVGLQVNETYELGDISITPYYAGH-VLGACMYRLEVN 240 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIK 214 ++++TGD+ D LG I + +ST A R SE + Sbjct: 241 NISVIYTGDYNTIPDKHLGS-------TKIPVLTPEIFISESTYASYVRPTRKSSELELC 293 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSI------------IDIAEQIGRKIVLLGSSLK 262 N+ + + G VL+ F+ + R + + I+ G + + Sbjct: 294 -NLVNECVHKGGKVLIPVFA--IGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYY 350 Query: 263 RVVSVAIDVGIIKKDQLFLSDESF-----GLYPREQLIVIATGSQGEPRSALAQLSRGEM 317 ++ S I + + L D S Y E ++ + G + LA + Sbjct: 351 KIYSSWISNNCVSTEVKNLFDFSNISQFSNNYLNENRPMVLFATPGMLHTGLALKA---F 407 Query: 318 RNVKLAEKDTVIFSSRAIPGN--EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 + + +I + G I K L++ + + S H N Sbjct: 408 KAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGSTYIYVNCKIIYLSFSAHADSNG 467 Query: 376 LKRMYQWIRPQVLVAIHGEPL-HLVAHKELALQEGIACVPPVRNGKM 421 ++++ + + P+ ++ +HG+ K ++ Q I + P Sbjct: 468 IQQLIKHVMPKNVIFVHGDKNGMEKLSKHISNQYHINSICPYMGQNC 514 >gi|258514362|ref|YP_003190584.1| beta-lactamase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778067|gb|ACV61961.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 522 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 79/281 (28%), Gaps = 56/281 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 + LG + + L K IMIDCG+ + + D + P Sbjct: 1 MRIRFLGAAQTVTGSCHLL----SVDGKNIMIDCGMFQGTKAIKERNYQDFLIP------ 50 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI--- 118 K+L + +THAH DH G L L PVY + LLE ++ Sbjct: 51 --PKSLACVILTHAHIDHSGLLPKLVKQGYKGPVYVTEATGDLLEVMLPDSGHIQETEVE 108 Query: 119 -----------------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + + H I + Sbjct: 109 AKNRKAKRAGKKLIEPIYTVDDAYAALELMQKVKYDEEFQVADNITARFQEAGH-ILGSA 167 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 L + + + D + ++ ++ +ST R + Sbjct: 168 MLELWAEETGDKAKFVFSGDLGNPDARFINDPAVVEEA----DYVIIESTYGNRRHKDRN 223 Query: 210 EK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + I K I N G +++ F+ V R + I+ Q Sbjct: 224 GRLDILKEIIWETYNKGGNLVIPAFA--VERTQDILYDLNQ 262 >gi|163733702|ref|ZP_02141144.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Roseobacter litoralis Och 149] gi|161392813|gb|EDQ17140.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Roseobacter litoralis Och 149] Length = 387 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 74/231 (32%), Gaps = 34/231 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG GE G + +M+D G+ G D P + ++L A+ Sbjct: 7 GGFGEKGR----TSVCVQTQGCSVMLDAGIKVGA----GDDSYHPR---LALSARDLDAL 55 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD--- 127 I+HAHEDH GAL L + P+Y + + A + + D Sbjct: 56 VISHAHEDHVGALCWLAAQGYTGPIYMTAETLAETPAALAQYARPDDLAAHPLASMDIRT 115 Query: 128 -----KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + VG +I++ H + M + +V+ GD + + Sbjct: 116 VQIGTRFSVGPLAIDTGHSGH-VAGGMWIAASDTSAKVVYCGDVV----------PNSEV 164 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 L+ D++ +S I + G ++ T Sbjct: 165 FPMTALPQCDLLVIDASYGADP---VSAHDRAIAIRAWIATHSGGCVLPTP 212 >gi|205375561|ref|ZP_03228349.1| YycJ [Bacillus coahuilensis m4-4] Length = 264 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 73/235 (31%), Gaps = 25/235 (10%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L G G N G + ++D G+S + T I Sbjct: 2 TMKFSVLASGSTG----NAVYVETG----DQAFLVDAGLSGKAMNEL--------FTKID 45 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ L I +TH H DH + L ++P+YA+ + +K + Sbjct: 46 RDIAKLSGILVTHEHSDHIKGIGVLARKYNLPIYANEKTWHAMSKNIGEIATDQK---FT 102 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDK 180 F G+ IES V+H E M V + D + D D Sbjct: 103 FDMETVKTFGSLDIESFGVSHDAAEPMFYVFHQGDKKLAVITDTGYVSDRMKGTIRNADA 162 Query: 181 DSLCAIGNEGILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + G+L + + + +S + D++ + + + Sbjct: 163 YVFESNHDVGMLQMGRYPWSTKRRILSDVGHVSNDDAALAMSDVIGDRTKRIYLA 217 >gi|218890161|ref|YP_002439025.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa LESB58] gi|254236530|ref|ZP_04929853.1| hypothetical protein PACG_02527 [Pseudomonas aeruginosa C3719] gi|254242312|ref|ZP_04935634.1| hypothetical protein PA2G_03053 [Pseudomonas aeruginosa 2192] gi|296387882|ref|ZP_06877357.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa PAb1] gi|126168461|gb|EAZ53972.1| hypothetical protein PACG_02527 [Pseudomonas aeruginosa C3719] gi|126195690|gb|EAZ59753.1| hypothetical protein PA2G_03053 [Pseudomonas aeruginosa 2192] gi|218770384|emb|CAW26149.1| putative metallo-beta-lactamase superfamily protein [Pseudomonas aeruginosa LESB58] Length = 467 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 72/486 (14%), Positives = 137/486 (28%), Gaps = 97/486 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLM 69 LG E+ + L ++++CG+ + + G FP ++ Sbjct: 7 LGAAQEVTGSCYLLETLDGVK---VLLECGMRQGRREADNGNRAPFP-FD-----PASID 57 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERVSK 116 A+ I+HAH DH G L L + P++A+ LLE R Sbjct: 58 AVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSAHIQEKDAEWENRWRN 117 Query: 117 KIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMALVIRSP 156 +I S + + +G + H I + + ++ Sbjct: 118 RIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFHNAGH-ILGSSIVEVQFH 176 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 +V +GD ++ + +M +ST R+ ++ Sbjct: 177 DQVQPRRLVFSGDLGNTCSPLMRAPSPLSR--------ADVVMLESTYGDRDHRDSNDTL 228 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 I D G VL+ +F+ V R + ++ + G ++ V + + Sbjct: 229 EELAAILDQAHRDGGNVLIPSFA--VGRTQDLLYYLGRF----YQEGRLPQQAVFLDSPM 282 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--AQLSRGEMRNVKLAEKDTVI 329 F RE + T E L + + M ++ +I Sbjct: 283 AARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINRIKSGAVII 342 Query: 330 FSSRAIPGNEVAIG-------------------------HIKNRLVEQGVRVIAEDAECP 364 S G + +I + V + Sbjct: 343 AGSGMCTGGRIVHHFKHNLWRPECHVVFPGFQARGTLGRNIVDGASAVRVFHQRIAVKAQ 402 Query: 365 VHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H S H + L RP L IHGE + A + + Sbjct: 403 IHTLGGFSAHAGQSQLLDWVGHFAHRP-ALYLIHGEREKMEALQGAIRERLDWDAEIPEP 461 Query: 419 GKMLRL 424 G+ + + Sbjct: 462 GERIEI 467 >gi|296121596|ref|YP_003629374.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] gi|296013936|gb|ADG67175.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] Length = 465 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 56/278 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG GE+ + L +S + +++DCG+ + Sbjct: 1 MKLTVLGAAGEVTGSQHLIE----TSTRRLLLDCGLFQGHRAESRAKN-----SHFHCRP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------- 109 K L A+ ++HAH DH G L L+ P++ +P + Sbjct: 52 KELDAVILSHAHIDHCGNLPGLYKAGFRGPIFCTPPTAEIAAVMLRDAAKIQAEDAEHLR 111 Query: 110 ----------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 + + G + DVG R I + + + Sbjct: 112 RHVDPRDARAIEPLYTEEHARAVCDLFETIPYGQREDVGKDVRMLFREAGHILGSAIVEL 171 Query: 154 ----RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + +V TGD IL D D L+ + T R Sbjct: 172 DLEEQGEWKRVVFTGDLGRRGLPILRDPQLVDR--------CDLLITEGTYGNRIHPEAG 223 Query: 210 EKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + ++ + I +G V++ F+ + R ++I+ Sbjct: 224 AQELELQRIIQRTAAREGRVIIPAFA--LGRTQNILYY 259 >gi|255577704|ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 543 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 104/326 (31%), Gaps = 27/326 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+THAH+DH + + P+YA+ LL +Y + + + G + + Sbjct: 27 FLTHAHKDHCSGI---LAHSSYPIYATHLTKSLL---LLYFPQLEDSLFVGIEVGQSLVI 80 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAI 186 G FS+ + NH P + + GNI+HTGD +L + I Sbjct: 81 DDPYGNFSVTAFDANH-CPGAVMFLFEGSFGNILHTGDCRLSPECIQCLPKKYISKNGKE 139 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + + D T S+ + + + + +V + + + ++ Sbjct: 140 PRCQLDYVFLDCTFGRFHQKLPSKHSASQQVINCIWKHPAAAIVYLTCDLLGQEELLANV 199 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + G KI V A + L + P + V G P Sbjct: 200 SRTFGSKI---------YVEKAANPECFHALTLTVPQILTQD-PSSRFHVF----NGFPM 245 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDAECPV 365 ++ + +I S E + R + V + V Sbjct: 246 LYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRLSEAVRDQFGIWHV 305 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+ Q + P+ +V+ Sbjct: 306 CYSMHSSREELEWFLQLLAPKWVVST 331 >gi|258620631|ref|ZP_05715668.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258587146|gb|EEW11858.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 438 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 133/447 (29%), Gaps = 98/447 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF--PKDDLPGVDLVFPDITFIMKERKNLM 69 GG + + + S + ++IDCG+ F + +D +L Sbjct: 7 GGKESVTGSC----HELRSDGQALLIDCGL-FQGADERPLEIDFAV----------NHLN 51 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC--- 120 + +THAH DH G L L + + ++ + L+ +S K Sbjct: 52 GLVLTHAHIDHIGRLPWLLAAGFNQLIFCTAATAELVPLMLEDGLKLQLGMSPKQSERVL 111 Query: 121 -------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWK 167 + I H I + + IR P +V +GD Sbjct: 112 TQVRRLLRVQDYQKWFALQPKRADSICIRFQPAGH-ILGSAYVEIRLPNGEVVVFSGDLG 170 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA--- 224 +L D + L ++T ++ + + + +++ + Sbjct: 171 PSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GDRLRVMIERSLSD 220 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLG-------SSLKRVVSV-- 267 G +L+ FS V R + ++ EQ I+L S +R + Sbjct: 221 GGAILIPAFS--VGRTQELLFDIEQLIFSHQIDANLPIILDSPMAQRVTRSYRRFKQLWG 278 Query: 268 ------AIDVGIIKKDQLFLSDESFGLYPR--------EQLIVIATGS----QGEPRSAL 309 + ++ E + R + ++ S G L Sbjct: 279 REAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIMDYL 338 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 L E ++ LA R I E ++ I VE + S Sbjct: 339 KALLPDERTDLILAGFQAEGTLGRKIQSGEQSVW-IDGDEVEVKAHIHTMSG-----YSA 392 Query: 370 HPYPNDLKRMYQWI--RPQVLVAIHGE 394 H DL R I +P+ + IHGE Sbjct: 393 HADQADLLRFITGIAEKPKQVHLIHGE 419 >gi|313682707|ref|YP_004060445.1| beta-lactamase [Sulfuricurvum kujiense DSM 16994] gi|313155567|gb|ADR34245.1| beta-lactamase [Sulfuricurvum kujiense DSM 16994] Length = 197 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 24/168 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + K I+ID G+ + +++ KN +AI TH H D Sbjct: 14 NCYIVRI----DGKEIIIDPGMGASE--------------WVIANVKNPVAILNTHGHFD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +L L++P+Y + LL+ + P ++ + D+G ++ Sbjct: 56 HVWSNSELQEKLNIPLYTPKGDMMLLQNSTWMPGLPPSTPDVAVEGDQAFDIGGIEVKFH 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 P + I + +GD+ + +D +++ Sbjct: 116 HFPGHCPGCSMIEIGDA----IFSGDFLFEGSIGRWDFPYSDGEAMRQ 159 >gi|163788038|ref|ZP_02182484.1| beta-lactamase-like protein [Flavobacteriales bacterium ALC-1] gi|159876358|gb|EDP70416.1| beta-lactamase-like protein [Flavobacteriales bacterium ALC-1] Length = 454 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 71/475 (14%), Positives = 137/475 (28%), Gaps = 76/475 (16%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 K ++ F LG G + + L +S K I+IDCG+ +L + + + Sbjct: 3 KFAKINF--LGAAGVVTGSKFLIE----TSEKNILIDCGMFQGLKELREL-----NWNAL 51 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + +TH H DH G L L + + + + E + Sbjct: 52 PIDVAAIDIVLLTHGHLDHVGYLPRLLKQGFTGKIIGTAPTLAIAEIILKDSAKIHEEEA 111 Query: 121 ISFQAGDKVDVGA----------------FSIES--------------VRVNHSIPETMA 150 F +E + N I Sbjct: 112 EKANKEKYTKHKPALPFYTIREAEKTITLFDVEIEDKWIYLSEHISYRFQYNGHIIGATF 171 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I V +GD +D +L D E L +ST + Sbjct: 172 IEIDINGKRFVFSGDIGRQNDYLLN---DPKK-----PEWADFLFVESTYGNKIHPKDDV 223 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKR 263 + + I + KG +++ +F+ V R+++++ I ++ I + Sbjct: 224 ENVLTEIIKDTIHKKGNLIIPSFA--VERLQTLMFILWKLYKQHKIPDIPIFIDSPMGNN 281 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG-------- 315 V+ V K + + Q + + RS + G Sbjct: 282 VLEVFKRFPKWHKLSMQDYNAMCNHINIIQSYRETWETIDDRRSKIIIAGSGMVTGGRVL 341 Query: 316 -EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGH 370 ++ + + TV+ G + + + E + +S H Sbjct: 342 TYLQQLVDEPQTTVLLVGYQAEG--TRGRQLLDGVHEIRFFGKYYSVNAAIKSIESLSAH 399 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 NDL I+ P+ + IHGEP L + + + R Sbjct: 400 ADQNDLLDWMSQIKNIPEKVYLIHGEPTALDTFRVKLKDRYNWNATIPKLTDIKR 454 >gi|15223519|ref|NP_174061.1| DNA cross-link repair protein-related [Arabidopsis thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20 [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1| unknown protein [Arabidopsis thaliana] gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis thaliana] gi|332192705|gb|AEE30826.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 422 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 61/373 (16%), Positives = 115/373 (30%), Gaps = 24/373 (6%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-----RVYERVSKKIPCISFQ 124 A F+TH H DH L WS P+Y S L ++ RV S Sbjct: 17 AYFLTHIHSDHTRGLSGGWSQ--GPLYCSRTTASLFPSRFPGFDLSLLRVVPLFSWTSLS 74 Query: 125 AGDKVDVGAFSIESVRV-NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + + H P ++ + R G ++TGD++ D DA T Sbjct: 75 LRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFGCFLYTGDFRWDSDASDEARTTLV-- 132 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AI + L D+T + S + + DI+ + ++ S + + + Sbjct: 133 AAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIASHPSHDIIIAVDS-LGKEDLL 191 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + ++ + KI + L+ + +G S PR + Sbjct: 192 VHVSRILNIKIWVWPERLRTM----HLLGFQDIFTTDTSLTRVRAVPRYSFSIQTLEGLN 247 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG--NEVAIGHIKNRLVEQGVRVIAEDA 361 + + G + + D + S NE + +E D Sbjct: 248 TMCPTIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVSAK---KELEAAAVHKFHDY 304 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQ----VLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 VH S H ++ + ++P+ ++V+ L + V +R Sbjct: 305 MYSVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFGRICGANQPPQVLLMR 364 Query: 418 NGKMLRLFPDPIE 430 I+ Sbjct: 365 PDIAEEFRAVRIK 377 >gi|289522713|ref|ZP_06439567.1| putative mRNA 3-end processing factor [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504549|gb|EFD25713.1| putative mRNA 3-end processing factor [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 416 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 68/418 (16%), Positives = 133/418 (31%), Gaps = 66/418 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG GE G + L + ++D GV + G+ P +K Sbjct: 1 MRLKCLGGFGEQGRSALLVE-----GKSCFLVDYGVKKTVGE--GILGELP-----LKNF 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 L I +THAH+DH L L ++VP+YA+P + +I Sbjct: 49 PELDFIVVTHAHQDHTAMLPLLVEKGINVPIYATPPTKEFTITYCESWHKNYEIHRLVPP 108 Query: 120 ------------CISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++ + + G I H + + + I I H GD Sbjct: 109 YDKQSIYELEKLFVTKPYFQEFEAGKGTLITFFPSGH-LVGSAIVYI-KDEKTIAHFGDI 166 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN--------IY 218 +D D D IG ++ S + EK +N + Sbjct: 167 NFNDAINPKPYLDFD--AEIG------IINGSYGDKIMPKELLEKKFIENVTSGRFNVLI 218 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAE---QIGRKIVLLGSSLKRVVSVAIDVGIIK 275 +G V+ ++S+I I I++ + ++++ +K ++ + Sbjct: 219 PSAALGRGQVVCLLLLENLSKIDKEIYISKSIIENTKRVLKYPHYIKPEAIGMLNKLVDS 278 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI 335 + + + I IA + AL +K ++ +I S Sbjct: 279 PYFKIIDESKLNDLIEKGAIFIAPDAMLSSGPAL-----KIFNLLKDQPQNKIILSGFLA 333 Query: 336 PGN------EVAIGHIKNRLVEQ-GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 PG E + N ++ ++V + + ++ L ++ P+ Sbjct: 334 PGTLGRKLAEREVS--INAVLSLSELKVHTDLTDNKFIINKTLSNAKLILIHHGEEPK 389 >gi|222152722|ref|YP_002561899.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222113535|emb|CAR41326.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 269 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 11/170 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G++ K + I ++ ++L AIFITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLTGKKITSLLAE--------IDRKPEDLDAIFITHEHSDHIKGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L H+ VYA+ +L+ + F+ + G IES V+H Sbjct: 71 GVLARKYHLDVYANEKTWQILDDR-NMIGKIDVSQKHVFERDKMITFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + V D + D + + + D + + + IL Sbjct: 130 AYDPQFYRFMKDNKSFVMLTDTGYVSDRMSGIIENADAYLIESNHDIEIL 179 >gi|229823262|ref|ZP_04449331.1| hypothetical protein GCWU000282_00560 [Catonella morbi ATCC 51271] gi|229787428|gb|EEP23542.1| hypothetical protein GCWU000282_00560 [Catonella morbi ATCC 51271] Length = 269 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 27/171 (15%) Query: 1 MKNE----ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLV 54 M L G G N+ S R+ +++D G+S + + +D Sbjct: 1 MSQNANGLRFSILASGSSG----NVTYVE----SDRQRLLVDAGLSGKKIESLMAQIDRS 52 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 D + AI +TH H+DH + L ++PVYA+ ++ Sbjct: 53 VAD----------VDAILVTHEHKDHIHGVGVLSRKYNLPVYANKATWQAMDGML---GA 99 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + V G + + +V+H + V D Sbjct: 100 IDPDNRRELEPDQLVTFGDLDVLTYQVSHDAAMPQFYAFQQGDKQFVMLTD 150 >gi|257065749|ref|YP_003152005.1| beta-lactamase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256797629|gb|ACV28284.1| beta-lactamase domain protein [Anaerococcus prevotii DSM 20548] Length = 263 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 15/147 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N++ Y I+ID G S K + + I ++ K+L IF+TH H Sbjct: 13 GNVSFLEY----KGSRILIDAGFSGRKIENL--------LAQIGEKAKDLDGIFLTHEHN 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+ +A + K+ F+ ++ + I Sbjct: 61 DHIQGAGVLSRRFDIPIYANEGTW---KAFAKKAKRLKEENIKIFKTNQFINFKSMDILP 117 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++H E + VI I D Sbjct: 118 ISIHHDAMEPVGYVIYLGNKKISLISD 144 >gi|302024079|ref|ZP_07249290.1| metallo-beta-lactamase superfamily protein [Streptococcus suis 05HAS68] gi|330832447|ref|YP_004401272.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] gi|329306670|gb|AEB81086.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] Length = 267 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 65/188 (34%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K I++D G+S K + I ++ + Sbjct: 9 SILASGSSG----NC----FYLETDKKKILVDAGLSGKKVTSLLAE--------IDRKPE 52 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 ++ AI +TH H DH + L + +YA+ +E+K F+ G Sbjct: 53 DIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKL---GKIDVAQKHIFELG 109 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G IES V+H + V D + D + + D + Sbjct: 110 AMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIE 169 Query: 185 AIGNEGIL 192 + + IL Sbjct: 170 SNHDIEIL 177 >gi|315645209|ref|ZP_07898334.1| Zn-dependent hydrolase [Paenibacillus vortex V453] gi|315279251|gb|EFU42557.1| Zn-dependent hydrolase [Paenibacillus vortex V453] Length = 438 Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 64/456 (14%), Positives = 133/456 (29%), Gaps = 78/456 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF-PDITFIMKERKNLMA 70 GG GE G + L +R +++DCGV + GV + P ++ L A Sbjct: 8 GGAGEHGRSAYLL----SGNRVHLLLDCGVM---KEGTGVYPIIQP------EQVPQLNA 54 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER---------------- 113 +F++HAHEDH A+ L+ V+ + L A R Sbjct: 55 VFLSHAHEDHSVAIPLLYRLGYQGEVWTTRETAAQLTAYFASWREYTERVGEKLPYREED 114 Query: 114 ---VSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + + D + R H + ++ L++ + I ++GD+ + Sbjct: 115 QRAIRYRFLEEEAKRLTWFDALPGVKVMWGRSGHLM-GSVWLLVEAEGKRIFYSGDYTSE 173 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + D + + + D+ + + + G VL Sbjct: 174 SLLLEDDNPTLADTSSAML--LDLAIVDAAYGTDAHSQADRLRQLEQTIQSTLQSGGKVL 231 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLL------------------------GSSLKRVV 265 + + V R + +I A + I ++ G +K + Sbjct: 232 LPVPA--VGRGQEMILWASRNWGHIPIVTEAPLIEGMKRLLCRSEWLRSTDSGQGMKSEL 289 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 + + ES+ L + G + R + Sbjct: 290 ELLLSQNNWIVPGSDAERESWLEKQGASLWFVTDGMMQSDLAQ-----WYYHR-FSRDSR 343 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP 385 + V+ + G + + Q + + + H D+++M I Sbjct: 344 NLVLLTGHVSNG-------TFGQRLLQHPEDYGDCSVMKIRYKVHQGLADVRQMITAIPA 396 Query: 386 QVLVAIHGEPLHLVAHK-ELALQEGIACVPPVRNGK 420 Q V +H + + L + + Sbjct: 397 QHTVLVHADKAETDRLRVRLVEELTDPHIHIHSISV 432 >gi|315178420|gb|ADT85334.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrio furnissii NCTC 11218] Length = 439 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 83/457 (18%), Positives = 141/457 (30%), Gaps = 80/457 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I IDCG F D V+ PD +++ A+ Sbjct: 7 GGKQTVTGSC----HELVVDDLAIFIDCG-MFQGQDTQDVE---PDFP-----IEHIQAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 +THAH DH G L L + P+Y +P L+ + + + Sbjct: 54 ILTHAHIDHIGRLPWLIASGFTAPIYCTPATAELVPLMLDDAMKLQSGFSRAQREVVLDK 113 Query: 131 VG----------AFSIE----------SVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 + F IE V H I + + I+ P IV +GD Sbjct: 114 IDHLIEPIDYEQPFRIESDSGVMLQCQFVPAGH-ILGSAYVEIQMPNQEVIVFSGDLGPS 172 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGC 227 +L D + L+ ++T + +++ I + + G Sbjct: 173 CTPLLPDP--------VPPMHADYLVIETTYGDTHHDGVDVRASKLREIIDRSLADG-GT 223 Query: 228 VLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 +L+ FS V R + + + + I+L ++V + D+ Sbjct: 224 ILIPAFS--VGRTQEVLFDIEQLVYEHQINVDLPILLDSPMAQKVTESYRRYKQLWGDEA 281 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI---------- 329 + V+ + S GE V A Sbjct: 282 KERLAMNRHPLAFEQCVLVQDYRSHQALVNRLSSTGEAAIVVAASGMCEGGRIVDYLKAL 341 Query: 330 ---FSSRAIPGNEVAIGHIKNRLVEQGVRVIAE----DAECPVHV----SGHPYPNDLKR 378 + I A G + + + V+ E D +HV S H +DL Sbjct: 342 LPDARTDIIFAGFQAEGTLGRAIQQGEKVVMIEGEAIDVNAQIHVMSGYSAHADQDDLLA 401 Query: 379 MYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + I +P+ + IHGEP A EL +G V Sbjct: 402 FVEGIDEKPKQVHLIHGEPQAKQAFAELLRGKGYTVV 438 >gi|302879403|ref|YP_003847967.1| beta-lactamase domain-containing protein [Gallionella capsiferriformans ES-2] gi|302582192|gb|ADL56203.1| beta-lactamase domain protein [Gallionella capsiferriformans ES-2] Length = 255 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 19/163 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L G +++DCG G+ + + Sbjct: 1 MKFASLGSGSE--GNALLVKRGQTH----VLLDCG--------FGLKDTVARLARLEVTP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I +TH H DH G + L +PV+ + + + K Sbjct: 47 SQLNGIIVTHEHGDHIGGVARLARQYRIPVWLTRGT-----HRAQPKAFEKVEELHEIDV 101 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +G +I+ V H E + + + D Sbjct: 102 HQCFSIGDLAIQPYPVPHDAAEPVQYRLSGGAKQLGVLTDAGC 144 >gi|241764683|ref|ZP_04762695.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|241365853|gb|EER60502.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 454 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 105/362 (29%), Gaps = 63/362 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ LGG G + + L + + +++DCG+ F + + Sbjct: 1 MEVNITFLGGAGTVTGSKYLVRH----NGHSMLVDCGL-FQGYKQL----RLRNWHPLPL 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLL----------------- 105 + A+ +THAH DH G L L + ++ +P L Sbjct: 52 APHQIDAVLLTHAHLDHSGYLPLLARDGYTKSIHCTPGTRDLCAILLPDSGHLQEEDAAF 111 Query: 106 --EAKRVYE------------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 + + K + + H I +L Sbjct: 112 LNRHQLTEHAPALPLYTRLDAQHCMKQFRTHAFHKSFEPIPGWRATFTPAGH-ILGAASL 170 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ I+ +GD D ++ +ST RE +E Sbjct: 171 LLEVGGRRILFSGDLG--------RPDDLIMNPPEAPPQADTVLVESTYGDREH--GNED 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDV 271 + + + + A+ + +V R ++++ LK+ ++A + Sbjct: 221 ILHELGPALHRLAQRGGVAVVPVFAVGRAQAVLHAINL-----------LKKQGAIAQSL 269 Query: 272 GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS 331 + + +S + + + A SA + E + + VI S Sbjct: 270 PVFLDSPMAVSTTGLFGHHPGEHRLTAHEVDALSHSATMVQTTDESKALARRHGPMVILS 329 Query: 332 SR 333 + Sbjct: 330 AS 331 >gi|260221901|emb|CBA30928.1| hypothetical protein Csp_C26000 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 261 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 66/218 (30%), Gaps = 47/218 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G I + + + ++ID G L Sbjct: 1 MKIRV--LGCSGAIAKHCRTTSFLLGAK---VLIDAGTGVGDLTL--------------D 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS----FLHVPV--YASPFAIGLLEAKRVYERVSKK 117 E + + +F+TH+H DH AL + P+ Y + L+ + + Sbjct: 42 EMQKIDHVFLTHSHLDHIAALPLMLDAVGARRDKPISLYGLQSTLDALKTHIFNDVIWPD 101 Query: 118 IPCISFQAGDKVDVGAFS-----------IESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I + + +E++ HS+P + + V TGD Sbjct: 102 FLKIPSAESPFLRLFPIEVGQQTLVDGLLVEALPAQHSVP-ALGYAVSKNGPCWVFTGDT 160 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 TD + + L+ ++ + +E Sbjct: 161 GN--------CTDL--WSRVNQLKVGMLVIETAFSNKE 188 >gi|229824803|ref|ZP_04450872.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] gi|229790806|gb|EEP26920.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] Length = 285 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 60/174 (34%), Gaps = 22/174 (12%) Query: 1 MKNEE----LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV 54 M N + L F L G G N +L G S ++DCG+S + + Sbjct: 1 MNNTKISSSLWFTTLASGSSG----NSSLIG---DSEGNHFLVDCGISCKR-----IVES 48 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 D + + ++ IFITH H DH L L +PV+AS + L K Sbjct: 49 LSDFSIDTE---SVKGIFITHEHADHINGLMMLMKKYKIPVFASLGTLSEL-TKCRGFDN 104 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 S K +A F + + H E M + D+ + Sbjct: 105 SYKKLMYKIEANRPFCFNDFKVNCFNIPHDAAEPMGFNFEKYDTKVSVCTDFGM 158 >gi|42519667|ref|NP_965597.1| hypothetical protein LJ0658 [Lactobacillus johnsonii NCC 533] gi|41583956|gb|AAS09563.1| hypothetical protein LJ_0658 [Lactobacillus johnsonii NCC 533] Length = 333 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 107/333 (32%), Gaps = 46/333 (13%) Query: 92 HVPVYASPFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 +P+YA P LL + + P I+ + + VG ++ V + Sbjct: 7 DIPLYAGPLTAALLPVLNRDGEFLLPAADKPKNYTRPIIAAKLNQPIKVGDITLTVVPSD 66 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 H L+I++P IVHTGD + + G D + L+ + T Sbjct: 67 HDAYGATGLIIKTPDKTIVHTGDIR-----LHGYHPDWVRQFMAAGKECDMLIIEGTGVS 121 Query: 203 REGTCISEKGIKKNIYDIMKNA-----------KGCVLVTTFSSSVSRIRSIIDIAEQIG 251 + K + + ++ K + T+ ++V RI II Sbjct: 122 WPERSEEDSEEFKGVKNEVELTERVVKYQKDNPKRQLTFNTYPTNVERILRII---SDSP 178 Query: 252 RKIVLLGS--SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 RK+VL L ++ + + L Q + Sbjct: 179 RKVVLHAKRAELLKLALQQDVPYYYLPEDEKIDALDPNLEVSYQ------DLLKDDHQYF 232 Query: 310 AQLSRGEMRNVKLAEKDTVIFS-SRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 Q+ + L + I S + + + A + ++G+ +I + S Sbjct: 233 WQVVGHYDQ---LQKGGLYIHSNAEPLGDFDPAYAPFIENIEKRGIELIT------LRCS 283 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAH 401 GH +LK + P++L +H L + Sbjct: 284 GHADVAELKEIIAGFEPKILAPVHTLHPELEEN 316 >gi|312130864|ref|YP_003998204.1| RNA-metabolising metallo-beta-lactamase [Leadbetterella byssophila DSM 17132] gi|311907410|gb|ADQ17851.1| RNA-metabolising metallo-beta-lactamase [Leadbetterella byssophila DSM 17132] Length = 464 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 64/493 (12%), Positives = 142/493 (28%), Gaps = 101/493 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G + + L + S I++DCG+ G++ +++F Sbjct: 1 MKIRFF--GAAQRVTGSKHLI---TTDSGTQILLDCGM------FQGINTSELNLSFGFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------VYERVSK 116 ++ + + ++HAH DH G + L + +Y +P + L + + + Sbjct: 50 PKE-VDILLLSHAHIDHSGLIPRLVKQGFNGKIYCTPATLDLCKIMLLDSARIQERDLDR 108 Query: 117 KIP-------------------------CISFQAGDKVDV-GAFSIESVRVNHSIPETMA 150 + + +E H I + Sbjct: 109 VNQRRKNRGEELLEYLYEEEDVYLALSLFVPQPLNKPFYIDKDVKVEFYNAGH-ILGSAG 167 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC--I 208 + + + T + D + D + ++C+ST R Sbjct: 168 IYLSFETPHYTKTLFFTADIGRKGDRILDDPA----PFPQADYIICESTYGDRLHEPDID 223 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII---DIAEQIGRKIVLLGSSLKRVV 265 + + +Y +G +++ F+ V R + ++ D E GR + Sbjct: 224 AHSRLLDMVYKTCVQKRGKLIIPAFA--VDRTQEMVFILDQLESSGRLPSIP-------- 273 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKLAE 324 + + + Y +E L I L ++ + + Sbjct: 274 --VYVDSPLAVEATRIMIRHKEDYNQEILDYIEKDGDAFGFKNLTYITDVQASKALNFRP 331 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV---------------------------- 356 + +I S+ + HI N + ++ + Sbjct: 332 EPCIIISASGMAEAGRIKHHIANNVEDRKNTILIVGYCSPNTLGAQLKAGNSTVKIFGED 391 Query: 357 --IAEDAECPVHVSGHPYPNDLKRMYQ---WIRPQVLVAIHGEPLHLVAHKELALQEGIA 411 + D E S H ++ + + L +HGE A +E L +G Sbjct: 392 KLVRADVEVMDSFSAHADYKEMMEYLSCQKVEKVKNLFLVHGEIKTQEAFREKLLGQGFR 451 Query: 412 CVPPVRNGKMLRL 424 V G++ L Sbjct: 452 KVTIPAQGEVYEL 464 >gi|283778673|ref|YP_003369428.1| beta-lactamase domain-containing protein [Pirellula staleyi DSM 6068] gi|283437126|gb|ADB15568.1| beta-lactamase domain protein [Pirellula staleyi DSM 6068] Length = 466 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 68/488 (13%), Positives = 129/488 (26%), Gaps = 106/488 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----SFPK---DDLPGVDLVFPDI 58 + LG ++ + G + +MIDCG+ F + P VD Sbjct: 1 MKLYFLGANRQVTGSRYCVEAG----GRRVMIDCGLFQERQFQDRNWNPTP-VD------ 49 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------ 105 + A+ +TH H DH G + L P+ + IGLL Sbjct: 50 ------AHTIDALLLTHVHIDHVGLVPKLVREGFSGPIIGTRPTIGLLDIMLRDSAEIQQ 103 Query: 106 -----EAKRVYERVSK-----------KIPCISFQAGDKVDVG-------AFSIESVRVN 142 + KR K + + V G F Sbjct: 104 EDAAYKKKRHEREGRKGKFEERPLYTVDDVDQTLPLCEGVMYGKRIDVIPGFQATFFEAG 163 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 H I + + +R + T + D + D L + ++ +ST Sbjct: 164 H-ILGSAMIELRVTEEGLTRTIVFSGDIGQWNKPIIRDPTLLKS-----ADYVIMESTYG 217 Query: 202 MREGTCISEKGIKKNIYDIMKNAK---GCVLVTTF--------SSSVSRIRS-------- 242 R ++ + ++ G V++ TF + R+ Sbjct: 218 DRLHKEGG--DVEDQMARVINETHTRGGNVVIPTFAVERAQELMYHIGRLVHQQKIPAVK 275 Query: 243 -------IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 +D+ E + ++ + +K L + + Sbjct: 276 VFLDSPMAVDVTEVFHKFSDCFDEAMWSSMQT--HGSPLKFPGLSMVRTAEQSKAINNYT 333 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 ++ +N++ + T++F G I +R E + Sbjct: 334 GPCVIMASSGMCNAGRIKHHLRQNIE-RPESTILFVGHQSEG--TLGRQILDRQREVRIH 390 Query: 356 VIAEDAECPVH----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEG 409 + SGH +DL P+ + HGE + + E Sbjct: 391 GQNFRVRADIAQIFGFSGHGDRDDLHHWLGAFEKPPKQVFLTHGEEKVALQMAKEIAAEK 450 Query: 410 IACVPPVR 417 V Sbjct: 451 GFNVLVPE 458 >gi|291550066|emb|CBL26328.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus torques L2-14] Length = 265 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 15/176 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S ++ID G+S + + + + L I ITH H Sbjct: 12 GNCIYVG----SDNSHLLIDTGIS--------KKRIEEGLNKLEIKGDELDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+P I ++ + + +G + Sbjct: 60 DHIKGLGVFSRKYEIPIYATPGTIAGIKES-SSLGKMPEGLLHPIKTDHPFRLGELDVHP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGIL 192 ++H E I ++ D D D L A + +L Sbjct: 119 FAISHDANEPSGYRIEQGGKSVAVATDLGKYDDYTVKNLKNLDAILLEANHDIHML 174 >gi|212640653|ref|YP_002317173.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] gi|212562133|gb|ACJ35188.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 265 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 25/242 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L G G N + ++ +++D G+S + + D Sbjct: 1 MNEMRFSVLASGSTG----NAFYVE----TKQERLLVDAGLSGKQLEKLFAD-------- 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + +++ I +TH H DH L + +P+YA+ ++ + +K Sbjct: 45 IDRHIEDITGILVTHEHSDHIKGLGVIARKYRLPIYANEKTWKAMDGIIGDIPLEQK--- 101 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G G +ES V+H E M V +V D + + + Sbjct: 102 FIFPTGSVRTFGDLDVESFGVSHDAAEPMFYVFHYEGKKLVLITDTGYVSERMKGVIRHA 161 Query: 179 DKDSLCAIGNEGILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 D + + +L + + + +S + + D++ + + + S Sbjct: 162 DVFVFESNHDVEMLRMGKYPWNIKRRILSDVGHVSNEDAGLALADVIGDQTKRIYLAHLS 221 Query: 235 SS 236 Sbjct: 222 QD 223 >gi|146319011|ref|YP_001198723.1| beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|146321221|ref|YP_001200932.1| beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|253752078|ref|YP_003025219.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253753903|ref|YP_003027044.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253755222|ref|YP_003028362.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|145689817|gb|ABP90323.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 05ZYH33] gi|145692027|gb|ABP92532.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 98HAH33] gi|251816367|emb|CAZ51998.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251817686|emb|CAZ55434.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251820149|emb|CAR46486.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|292558661|gb|ADE31662.1| Beta-lactamase-like protein [Streptococcus suis GZ1] gi|319758445|gb|ADV70387.1| beta-lactamase superfamily hydrolase [Streptococcus suis JS14] Length = 267 Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K I++D G+ + + +I ++ + Sbjct: 9 SILASGSSG----NC----FYLETDKKKILVDAGL-----SGKKITSLLAEID---RKPE 52 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 ++ AI +TH H DH + L + +YA+ +E+K F+ G Sbjct: 53 DIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKL---GKIDVAQKHIFELG 109 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G IES V+H + V D + D + + D + Sbjct: 110 AMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIE 169 Query: 185 AIGNEGIL 192 + + IL Sbjct: 170 SNHDIEIL 177 >gi|229542347|ref|ZP_04431407.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229326767|gb|EEN92442.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 264 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + + I + +L I +TH H DH + Sbjct: 17 IYVETEQHAFLVDAGLSGRQMEQL--------FGQIGRNIADLSGILVTHEHSDHIKGIG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +PVYA+ +E SF G+ IES V+H Sbjct: 69 VLARKYQLPVYANDKTWSAMEGMIGE---IPTDLKFSFGMESVQSFGSLEIESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 + M + +V D + D D + + +L + Sbjct: 126 AQPMFYIFHEGGKKLVIITDTGYVSDRMKGTISNADIFVFESNHDVEMLRMGRYPWSVKQ 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMGEVIGDRTKRIYLAHLSKD 222 >gi|223932687|ref|ZP_03624686.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|223898657|gb|EEF65019.1| beta-lactamase domain protein [Streptococcus suis 89/1591] Length = 267 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K I++D G+ + + +I ++ + Sbjct: 9 SILASGSSG----NC----FYLETDKKKILVDAGL-----SGKKITSLLAEID---RKPE 52 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 ++ AI +TH H DH + L + +YA+ +E+K F+ G Sbjct: 53 DIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKL---GKIDVAQKHIFELG 109 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G IES V+H + V D + D + + D + Sbjct: 110 AMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIE 169 Query: 185 AIGNEGIL 192 + + IL Sbjct: 170 SNHDIEIL 177 >gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp. lyrata] gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp. lyrata] Length = 1413 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 55/411 (13%), Positives = 123/411 (29%), Gaps = 50/411 (12%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 +A F++H H DHY L WS + ++ S L+E + Sbjct: 80 VAFFLSHFHSDHYSGLSSTWSK-GI-IFCSHKTARLVEEILQ----VPSQFVFALPMNQM 133 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSP-----VGNIVHTGDWKLDDDAILGDVTDKDSL 183 V + + + NH P + + + VHTGD+ D+ Sbjct: 134 VMIDGSEVVLIEANH-CPGAVQFLFKVKLENGGFERYVHTGDF---------RFCDEMRF 183 Query: 184 CAI--GNEGILALMCDSTNAMREGTCISEKG-------IKKNIYDIMKNAKGCVLVTTFS 234 + G G + D+T + +++ + I K VL + Sbjct: 184 DSFLSGFIGCDGVFLDTTYCNPKFVFPTQEESVGYVVSVIDKIDGECVETKKKVLFLVAT 243 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 + + + +++IA + RKIV+ + + + G +++ + L Sbjct: 244 YVIGKEKILVEIARRCKRKIVVDLRKM--SILGILGCGESGMFTEDVNESDVHVVGWNVL 301 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 + P + E + + + + G + + V Sbjct: 302 ------GETWPYFRPNFVKMNE---IMVEKGYDKVVGFVPT-GWTYEVKR-----NKFAV 346 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 R V S H ++L+ ++++P+ ++ G + + KE+ + Sbjct: 347 RFKDSMEIHLVPYSEHSNYDELREYIKFLKPKRVIPTVGVDIEKLDSKEVNKMQKHFSGL 406 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVG 465 + D ++ A++ + G Sbjct: 407 VDEMANKKDFLLG---FYCQSYQKNEKNDVDVVSGLAEVYAGDDKNACEDG 454 >gi|90410760|ref|ZP_01218775.1| hypothetical protein P3TCK_26987 [Photobacterium profundum 3TCK] gi|90328391|gb|EAS44689.1| hypothetical protein P3TCK_26987 [Photobacterium profundum 3TCK] Length = 451 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 85/246 (34%), Gaps = 40/246 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++IDCG+ + D++ DI F ++ + A+ +TH+H DH G + Sbjct: 16 CHEIKLGKHGLLIDCGMFQGSESK---DVL--DIDFPIEH---IHALLLTHSHIDHVGRI 67 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRVY-------------------ERVSKKIPCISFQ 124 L + +YAS + LL + K Sbjct: 68 PWLLAAGFKGKIYASEATVALLPLMLADGLKIQLGFNQQQCDQFTLLVKSRLKAIPYDCW 127 Query: 125 AGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A + G I H + ++ S +V +GD + +L D + Sbjct: 128 AQIILPSGELVKIRFQPAGHILGSAYIEIMLSTGEIVVFSGDLGSCNTPLLVDPISPEI- 186 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + L+ +ST + + + + K I + G +L+ FS V R + Sbjct: 187 -------VDTLVIESTYGDQVHHDVERREAQIKGIIERSLIDGGVILIPAFS--VGRTQE 237 Query: 243 IIDIAE 248 ++ E Sbjct: 238 LLFDIE 243 >gi|332637967|ref|ZP_08416830.1| beta-lactamase family hydrolase [Weissella cibaria KACC 11862] Length = 266 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 13/163 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + +++D G+ +D + + I + +++ A+F+TH H DH + L Sbjct: 21 IETPTHKVLVDAGL-----SGKKIDGLM---SQIGRSLQDVDALFVTHEHSDHIAGVGVL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +YA+ + K +K F+AGD G +ES V+H + Sbjct: 73 ARKYGFDIYANAKTWDAMAGKI---GKAKPEQMNLFEAGDTKLFGDLDVESFSVSHDAAD 129 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGN 188 D + D A D + A + Sbjct: 130 PQFYAFHHNNKTFAMLTDTGYVNDRIAGTIRNADAILMEANHD 172 >gi|126656103|ref|ZP_01727487.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110] gi|126622383|gb|EAZ93089.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110] Length = 552 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 61/417 (14%), Positives = 134/417 (32%), Gaps = 54/417 (12%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-ERKNLMAIFITHAHEDHYGALHDLWSFL 91 I++DCG+ D+T ++ + + A+F +HAH DH L L Sbjct: 38 HRILLDCGLR--------------DLTPLINQNQPPVDAVFCSHAHSDHARGLKALHEAF 83 Query: 92 H-VPVYASPFAIGLLEAKRVYERVSKKIPCIS--FQAGDKVDVGAFSIESVRVNHSIPET 148 +P+YAS LL + K F +++ R H +P Sbjct: 84 PTIPIYASHVTKQLLPLNWPEKNSPKTANFCQGLFWEKPFELFDDLTVQLFRAGH-LPGA 142 Query: 149 MALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 ++ + +++TGD+ L + ++ ++ + A+ L+ + T Sbjct: 143 ASISLTYRTVERAYKLLYTGDFSLSNLQLVEGLS----IEALRGLSPDILIIEGTYGTMR 198 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 ++ K+ + I + V ++ + I+ + + G L Sbjct: 199 HPHRRQQE-KELMQRIHECLTHGYSVVLPVPTLGLGQEILKLLRSHHQ---FTGRDLDIW 254 Query: 265 VS------VAIDVGIIKKDQLFLSDESFGLYPREQLIVI----------ATGSQGEPRSA 308 V + ++ + + + + + + P Sbjct: 255 VDGQVANACDRYLDLLPEFPISVQNFAKHQPLFWDERICPRLRRLTPQQRGKIGQTPCVV 314 Query: 309 LAQLSRGEMRNVKLAEKDT-VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L L ++F + G + I + V V E + Sbjct: 315 LTDNITTLYDEGYLLSGLWVMLFPAAPHEGQTLESPDIV--KFMEKVSVHTES----YVL 368 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + H + ++ +RPQ ++ +HG P++L L + + GK++ L Sbjct: 369 AEHSDGRNTTQLIHNLRPQHIIFVHGSPINLTDLTSLEELQNRYQLHLPSTGKLVEL 425 >gi|253995981|ref|YP_003048045.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253982660|gb|ACT47518.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 260 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 36/187 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG + Y S I+ID G + E + Sbjct: 7 LGCSGGIGGD---YRTTSLLLDHDILIDAGSGVGDLSM--------------DELLKISH 49 Query: 71 IFITHAHEDHYGALHDLWSFL------HVPVYASPFAIGLLEAKRVYERVSKKIPCI--- 121 IF+TH+H DH + L + + +YA+ + +L+A ++ I Sbjct: 50 IFVTHSHLDHIAFIPLLLDTVMGIRSEPITLYATQETLAILQAHIFNWKIWPDFNAIPNA 109 Query: 122 --------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK-LDDDA 172 + G V +G +I ++ V+H +P + I+ ++V+TGD D Sbjct: 110 TAPFLRYQEIKLGQPVVLGGRTITALPVHHVVP-AVGYHIKGAAHSLVYTGDTTICDALW 168 Query: 173 ILGDVTD 179 + + Sbjct: 169 HAVNNIN 175 >gi|156091217|ref|XP_001612356.1| cleavage and polyadenylation specifity factor protein, truncated [Plasmodium vivax SaI-1] gi|148801158|gb|EDL42563.1| cleavage and polyadenylation specifity factor protein, putative, truncated [Plasmodium vivax] Length = 289 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + LGG E+G + + S+ + IM+DCG+ P + + Sbjct: 2 NNINIVCLGGASEVGRSCVIIE----SANRSIMLDCGI------HPAFMGIGCLPIYDAY 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + ITH H DH GAL L + VY + + +K + Sbjct: 52 DISKVDLCLITHFHMDHSGALPYLVNRTRFKGKVYMTEATKSICYLLWNDYARIEKCMHM 111 Query: 122 SFQA 125 + Sbjct: 112 MNKM 115 >gi|18311587|ref|NP_563521.1| metallo-beta-lactamase family protein [Clostridium perfringens str. 13] gi|18146271|dbj|BAB82311.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 263 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 65/232 (28%), Gaps = 23/232 (9%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSEKTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS---TNA 201 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKHKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 ++ + + + G +V + R + ++ Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDMHRKIILGHLSNTNNVP 225 >gi|240144183|ref|ZP_04742784.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|257203787|gb|EEV02072.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|291536438|emb|CBL09550.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Roseburia intestinalis M50/1] gi|291538694|emb|CBL11805.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Roseburia intestinalis XB6B4] Length = 536 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 67/461 (14%), Positives = 134/461 (29%), Gaps = 81/461 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + +G I++DCG+ D + P + Sbjct: 6 LGAAHEVTGSCHYLSFGDKH----ILVDCGMEQGPD--LYTNQEIP------VNAAMIDY 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------ERVSKKIPCIS 122 +F+THAH DH G L L++ +Y + L E + Sbjct: 54 VFVTHAHIDHSGLLPLLYNHGFRGKIYCTLATNELCNIMLKDSAHIQMFEAEWRNRKAKR 113 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVI------RSPVGNIVHTGDWKLDDDAILGD 176 + V + + ++H +P I + H + + D Sbjct: 114 AGKPEVVPLYDMNDAMSVLSHFVPCDYQKKIKVCDGLEIRFVDAGHLLGSSSIEMWVRDD 173 Query: 177 VTDKDSLCAIGNEGI---------------LALMCDSTNAMREGTCISEKGI--KKNIYD 219 + L G+ G ++ +ST R+ + I K I + Sbjct: 174 DGTEVKLAFSGDIGPGNRPLIKDPEYIKDADYVIMESTYGDRKHNTPPDFAIALAKVIKE 233 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + G ++V FS V R + ++ +I ++ + + + + V Sbjct: 234 TLYERGGNLVVPAFS--VGRTQEMLYFIRRIKSEHLLPEFENFEVYIDSPLAVEATSIFN 291 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + E L+ G P +A ++ E + + + VI S+ + Sbjct: 292 KSV--EECFDEDARALVQQGINPIGFPGLKMA-ITSDESKMINFNDNPKVIISASGMCEA 348 Query: 339 EVAIGHIKNRLVEQGVRVIA------------------------------EDAECPVHVS 368 H+K+ L + ++ E +S Sbjct: 349 GRIRHHLKHNLWRKDSTILFVGYQVPGTLGFSLLNGAKEVRLFGETIEVAARIENLPGIS 408 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 GH L + +P+ + +HGE + Sbjct: 409 GHADVEQLTKWAAAFENKPKKVFVVHGEDKVTEQFADHLKD 449 >gi|195953143|ref|YP_002121433.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932755|gb|ACG57455.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 451 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 68/461 (14%), Positives = 132/461 (28%), Gaps = 98/461 (21%) Query: 31 SRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 + I+IDCG+ D+ G D K + A+ +THAH DH G + Sbjct: 22 DDEKILIDCGLFQGVDEEKSEELGFD------------PKEVDAVLLTHAHIDHCGRIPM 69 Query: 87 LWSF-LHVPVYASPFAIGL--------LEAKRVYERVSKKIPCI---------------- 121 L +Y + L + + K Sbjct: 70 LIKNGFKGKIYCTRPTYELSRLMLLDTAKVMLENYKSHMKRFQRGTIKEIPLEPLYDEDD 129 Query: 122 ----------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 +F D+ + H I + I IV +GD Sbjct: 130 VFEALEHFEPTFSYDKTYDILGAKVTPKDAGH-ILGSCFYEIEYKDKRIVFSGDLGNKGK 188 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 I+ D + + +ST R + K+ + +I+KN V Sbjct: 189 PIVRDFSLPSK--------ANVVYMESTYGDRLHKSFDQS--KEELKEIIKNTITHGNVL 238 Query: 232 TFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 S ++ R + I+ + + + + ++ + +K+ + Sbjct: 239 IPSYALERTQDILYVLREFYEEGSLPKCKIFLDSPLAIGVTKVFLRNPEYFRKETYDIMQ 298 Query: 284 ESFG------------------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 + +E I+IA L + R+ E+ Sbjct: 299 KEDPFSLPYLTMVRDVEESKQINDIQEGAIIIAGSGMLSGGRILHHI-----RHHAYKEQ 353 Query: 326 DTVIFSSRAIPGN-EVAIGHIKNRLVEQGVRVIAEDAECPVH-VSGHPYPNDLKRMYQWI 383 + ++F G I +N + G + V+ S H ++L Sbjct: 354 NAIVFVGYQPHGTLGRRILEKQNPVFVMGEPINVRAKIYTVNGFSSHADQSELIEWVNAA 413 Query: 384 RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 P+ + IHGE ++ L + G V +++ + Sbjct: 414 NPKKICLIHGEEDKMLV---LKDKLGNKNVYIPSRKEVIDV 451 >gi|300857326|ref|YP_003782310.1| putative metal dependent hydrolase [Clostridium ljungdahlii DSM 13528] gi|300437441|gb|ADK17208.1| predicted metal dependent hydrolase [Clostridium ljungdahlii DSM 13528] Length = 261 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 24/171 (14%) Query: 25 GYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 S I+ID G+S ++ L + + ++ AI +TH H DH Sbjct: 14 SIFIASDNAKILIDAGLSGKSIENALLKI----------GHKPNDIDAILVTHEHSDHIK 63 Query: 83 ALHDLWSFLHVPVYASPFA-IGLLEA--KRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 + L +P+YA+ +L++ K + + +++ I S Sbjct: 64 GVGVLSRKYDIPIYANTLTWKAMLKSIGKIKEHNIK-------IIYDNYINIKDMDIVSY 116 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGN 188 ++H + + D + D + +D L + + Sbjct: 117 GISHDAADPYGYAVNCKNKKACVATDLGFMSDHIKDILKDSDLILLESNHD 167 >gi|312127661|ref|YP_003992535.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] gi|311777680|gb|ADQ07166.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] Length = 540 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 75/499 (15%), Positives = 142/499 (28%), Gaps = 91/499 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ K ++DCG F G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLFE----LEGKKFLVDCG-MFQG----GLTEELLNYESFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL---------------LEAK- 108 + + ++HAH DH G + L+ +Y + + L +E K Sbjct: 52 SEIEFVILSHAHIDHSGRIPKLYKDGFRGVIYTTDATMDLCSIMLPDSAHIQESEIEWKN 111 Query: 109 ----------------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 K S H + + + Sbjct: 112 RKRKREGKEQLLPLYTLEDAENVLKHFRGVKYGQKIQIDKNLSFVFKDAGH-MLGSAIVE 170 Query: 153 IRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD + IL D T +G L +ST R + Sbjct: 171 LYIKENGKEYKLVFSGDLGNRNVPILKDPT--------IIDGCDYLFIESTYGNRLHVDV 222 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 E KK I I V S +V R + I+ + + + R V + Sbjct: 223 -ENKFKKLIDIICTTISNGGKVIIPSFAVGRTQEILYEIAK-EISTDSEEAKIIRNVEIF 280 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG-EPRSALAQLSRGEMRNVKLAEKDT 327 +D + + + + E + I G EP + S E + + +K Sbjct: 281 VDS-PLATSATAIYKKHIDYFDSEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKSC 339 Query: 328 VIFSSRAI--PG-----------NEVA-------------IGHIKNRLVEQGV----RVI 357 +I SS + G NE + + + + + Sbjct: 340 IIISSSGMCEAGRIKHHLKHNLWNEKNTVLFVGYQAPNTLGRRLLDGQKKVKIFGEEVEV 399 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 E SGH + L + + +P+ + +HGE + + V Sbjct: 400 RAKIEYIEAYSGHADKSGLFSWIEQMSEKPKKIFVVHGEKEIQLEFAKELQNRFNTDVIV 459 Query: 416 VRNGKMLRLFPDPIEIIDE 434 G+M + P+ + + Sbjct: 460 PARGEMYEIAPEYVAPSER 478 >gi|89900752|ref|YP_523223.1| beta-lactamase-like protein [Rhodoferax ferrireducens T118] gi|89345489|gb|ABD69692.1| beta-lactamase-like [Rhodoferax ferrireducens T118] Length = 454 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 134/450 (29%), Gaps = 87/450 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG G + + L +G+ S +++DCG+ F + T + Sbjct: 3 VNITFLGGAGTVTGSKYLVRHGAES----LLVDCGL-FQGYKPL----RLRNWTRLPVAP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK------- 117 + A+ +THAH DH G L L V+A+ L ++ Sbjct: 54 NQIDAVVLTHAHLDHSGYLPLLVREGFAGHVHATSGTRDLCRILLPDSGHIQEEDAAFAN 113 Query: 118 -----------IPCISFQAGDKV-------------DVGAFSIESVRVNHSIPETMALVI 153 A D + + + + H I ++++ Sbjct: 114 RHGFSKHAPALPLYTRQDALDCLPRIKAVDFGKTFQPIPGWRVTFSTAGH-ILGAASVLL 172 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I+ +GD DD I+ + + N ++ +ST RE E + Sbjct: 173 EVAGRRILFSGDLGRTDDLIM----NPPAKAPAANT----VLIESTYGDREHPK--EDVL 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 + + K AK + +V R ++++ Q+ + L +SL + + V Sbjct: 223 AELAPALQKLAKRGGVAVIPVFAVGRAQALLHAIHQLKLR-GELPTSLPVFLDSPMAVHT 281 Query: 274 IKKDQLFLSDESFGLYPREQLI-----------------------VIATGSQGEPRSALA 310 + + L +++ L Sbjct: 282 THLFEAHQGEHRLSSKDTHALTHSATMVNSTDESRALASRHGPMVILSASGMATGGRVLH 341 Query: 311 QLSR--GEMRNVKLAEKDTV-IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L+ G RN+ + I G ++ I VE V+ + Sbjct: 342 HLAHYAGNHRNMIILTGYQAPGTRGATIAGGAKSV-RIHGHDVELQAEVVQLQS-----A 395 Query: 368 SGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 S H + L + + P + HGE Sbjct: 396 SAHADASQLLAWLRTMPQAPDQVYVTHGEW 425 >gi|297539541|ref|YP_003675310.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297258888|gb|ADI30733.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 259 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 17/163 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N + ++ +M+DCG S + + + + Sbjct: 1 MRFASLG-SGSAG-NALVVE----VNQTRLMLDCGFSIKET--------LARLARLSLQP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L I ITH H+DH G + +PV+ + + + + + + Sbjct: 47 DDLAGIVITHEHDDHAGGAFKFAAKYKIPVWLTYGTLKMSSRYI---PIQHDLQLNVVDS 103 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + VG ++ V H E M V + D Sbjct: 104 HSEFSVGDIHVQPYPVPHDAREPMQCVFSDGNHKLGVLTDVGR 146 >gi|312876027|ref|ZP_07736016.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor lactoaceticus 6A] gi|311797225|gb|EFR13565.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor lactoaceticus 6A] Length = 540 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 64/523 (12%), Positives = 144/523 (27%), Gaps = 100/523 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ K I++DCG+ G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLFE----LEGKKILVDCGM-----FQGGLTEELLNYESFPFNL 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + ++HAH DH G + ++ +Y + + L Sbjct: 52 SEIEFVILSHAHIDHSGRIPKIYKDGFRGVIYTTDATMDLCSIMLPDSAHIQESEIEWKN 111 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALV 152 + KR + + + + S H + + + Sbjct: 112 RKRKREGKELLLPLYTLEDAENVLKHFRGVKYGQKIQIDKNLSFVFKDAGH-MLGSAIVE 170 Query: 153 IRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD + IL D T +G L +ST R + Sbjct: 171 LYIKENGKEYKLVFSGDLGNRNVPILKDPT--------IIDGCDYLFIESTYGNRLHVDV 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ---------------- 249 K K + DI+ G V++ +F+ V R + I+ + Sbjct: 223 ENKS--KKLIDIISTTISNGGKVIIPSFA--VGRTQEILYEIAKEISTDSEEAKIIRNVE 278 Query: 250 --------------IGRKIVLLGSSLKRVVSVAIDVGIIKK--DQLFLSDESFGLYPREQ 293 + I + + + I + + + + Sbjct: 279 IFVDSPLATSATAIYKKHIDYFDAEAAKFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKS 338 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 I+I++ E L + + + K + Sbjct: 339 CIIISSSGMCEAGRIKHHL---KHNLWNEKNTVLFVGYQAPNTLGRRLLDGQKKVKIFGE 395 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 + E SGH + L + + +P+ + +HGE + + Sbjct: 396 EVEVRAKIEYIEAYSGHADKSGLFTWIEQMSEKPKKIFVVHGEKEVQLEFAKELQNRFNT 455 Query: 412 CVPPVRNGKMLRLFPDPIEIIDEVVHG-LFLKDGFLIGKFADL 453 V G+M + P+ + + + + ++ + D+ Sbjct: 456 DVIIPARGEMYEITPEYVAQSERLFSELPSFINLSVLAQIEDI 498 >gi|113868001|ref|YP_726490.1| putative RNA modifying enzyme [Ralstonia eutropha H16] gi|113526777|emb|CAJ93122.1| Putative RNA Modifying Enzyme [Ralstonia eutropha H16] Length = 452 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 66/446 (14%), Positives = 118/446 (26%), Gaps = 88/446 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + Y + R +M+DCG+ F + + + L A Sbjct: 6 LGATDTVTGS----KYLLDTGRHQVMVDCGL-FQGYKTL----RLRNWDPLPLDPAKLDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------------EAKRV 110 + +THAH DH G L L V+ + L Sbjct: 57 VVLTHAHIDHSGYLPLLVRNGFRGSVHCTMGTAQLCGILLPDSAHLAEEDADYANRKGFS 116 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSI------------ESVRVNHSIPETMALVIRSPVG 158 R + + + A + E R H I + + Sbjct: 117 RHRPALPLYTAADAARAMRRLQPMQFGKRFQVVPGVEAEFARAGH-IIGAAIVTLFVDGK 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 IV +GD D L+ +ST R + I Sbjct: 176 RIVFSGDLGRQQ--------DIVMRAPEMVRQADYLLVESTYGDRRHPDDDPLDVLGEIV 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG-IIKKD 277 G +++ F+ V R +S++ ++ LKR+ V + + + D Sbjct: 228 SRTIGRGGSLIIPAFA--VGRTQSLLYCLHRL--------RELKRIPDVPVYLNSPMAID 277 Query: 278 QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK---------------- 321 + + A + P ++ Q Sbjct: 278 ATMIFSLHPEELRISREECAAACNLATPVQSMEQSIWLNHDRSPKIILAGSGMATGGRVV 337 Query: 322 -------LAEKDTVIFSSRAIPGNEVA--IGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 ++TV+ S G A ++ V + E ++S H Sbjct: 338 HHIAAYGPDPRNTVLLSGFQAAGTRGAALAAGRRDIRVHGKDIAVHASVEQVENLSAHAD 397 Query: 373 PNDLKRMYQWIR--PQVLVAIHGEPL 396 +L P+ +HGEP Sbjct: 398 AAELMTWLGGFHQAPRRTFVVHGEPQ 423 >gi|326804026|ref|YP_004321844.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650830|gb|AEA01013.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 276 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ I++D G+S + + + I ++ K+L AIFI+H H DH + Sbjct: 31 IETPQRNILVDAGLSGKRIEEL--------LQKIGRDAKDLDAIFISHEHSDHSKGAGIM 82 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ LE K I + G+++ G I S V+H Sbjct: 83 ARRYQLPIYANADTWSYLEQKC---GKLDADQKIIMEPGERISFGDVDILSFPVSHDSIN 139 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + D + D A L +D Sbjct: 140 AQFYAFQKDGKQFAMMTDLGYVSDRLAGLVYNSD 173 >gi|296160940|ref|ZP_06843752.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gi|295888829|gb|EFG68635.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 487 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 78/276 (28%), Gaps = 52/276 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + Y + I+IDCG+ F + + + + Sbjct: 1 MKLTFLGAAETVTGS----RYLLDGAGLRILIDCGL-FQGTK----NQRLRNWNPLPIDV 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 L A+ +THAH DH G L L PVY + L + A+ E + Sbjct: 52 GTLDAVILTHAHLDHSGYLPVLVRMGYRGPVYCTRGTRDLCQVMLRDSARLQEEEAAYAN 111 Query: 119 PCISFQAGDKVDVGAFS-------------------------IESVRVNHSIPETMALVI 153 + + + + H I +V+ Sbjct: 112 RHGLSKHHPALPLYTLEDAEKALELLEPRDFDVPKQLNDHACFRLLPAGH-ILGAAGVVL 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 I +GD D + L+ +ST R Sbjct: 171 CVEGKVIAFSGDLG--------RPDDPIMRAPMPLAHADYLIVESTYGDRLHDKTDPAAE 222 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ G V++ F+ V R +SI+ Q Sbjct: 223 LAELFATTFRRGGVVVIPCFA--VGRAQSILHYIAQ 256 >gi|312897898|ref|ZP_07757312.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] gi|310620993|gb|EFQ04539.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] Length = 306 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 18/151 (11%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N L GS I+ID G+S+ + + ++ ++ A+F+TH H Sbjct: 53 GGNATLVCCGSTK----ILIDAGISYRR--------ITNALSARGYSPADIDALFLTHEH 100 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L L +PVY + L + + P +V VG + Sbjct: 101 TDHVQGLPILLKNTDMPVYTTEETWRAL------GKTATSAPGRFVPLTKRVGVGDIYVV 154 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + H + + I + D Sbjct: 155 PFEIPHDAARPVGYAVYDGQTKITYATDLGY 185 >gi|225868180|ref|YP_002744128.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701456|emb|CAW98589.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 270 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I + Sbjct: 8 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRR 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + ++ VYA+ +++ + F+ Sbjct: 52 PEDLDAILITHEHSDHIKGVGIMARKYNLDVYANEKTWQMIDER-HMIGNLDVTQKHVFE 110 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G + G IES V+H + I + V D + D A + + D Sbjct: 111 RGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAGIIENAD 167 >gi|332876715|ref|ZP_08444473.1| metallo-beta-lactamase domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685274|gb|EGJ58113.1| metallo-beta-lactamase domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 296 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 14/164 (8%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + L F+ LG G G + Y S I+ID G+ G+ + Sbjct: 25 NTDMLKFICLG-SGSSGNS-----YFLFSENYGILIDAGI--------GIRTLKKHFHTY 70 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + A+ ITH H DH A+ L + +PVYA+ ++ K Sbjct: 71 GLSLKQIKAVLITHDHADHIKAVGSLANEYGLPVYATELVHDGIKRNYCANPKLKAENIH 130 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G + + F I V H + + ++ N D Sbjct: 131 FLEKGQTLKLDRFEITPFDVPHDSTDNVGYSLQYGEVNFCLITD 174 >gi|331091049|ref|ZP_08339891.1| hypothetical protein HMPREF9477_00534 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405271|gb|EGG84807.1| hypothetical protein HMPREF9477_00534 [Lachnospiraceae bacterium 2_1_46FAA] Length = 266 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 15/166 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 N G S I+ID G+ ++ G I + L I +TH H Sbjct: 12 GNCIYVG----SDHTHIIIDAGISKKKIEEGLG---------KIGISGEELDGILVTHEH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L VP+YA+ I +E + S +A ++ +G +I+ Sbjct: 59 SDHIQGLGVFSRKYKVPIYATAGTICGIENY-KSLGKMPEGLFHSIKADEEFSLGELTIK 117 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++H E I ++ D D I+ + D ++L Sbjct: 118 PFAISHDAIEPTGYRIEKNQKSVAVATDLGNYDKYIVEKLKDVNAL 163 >gi|222151435|ref|YP_002560591.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] gi|222120560|dbj|BAH17895.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] Length = 206 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 30/166 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK +++ +G I N + + ++ +++D G D + Sbjct: 1 MKKKKI------ALGMIETNCYILE----NEQEILIVDPG--------NEADRLI---DA 39 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-------AKRVYER 113 I K + + +THAH DH GA+ + S+ VY S L K Sbjct: 40 IGNTDKKVSGVLLTHAHFDHIGAVDAICSYYQCEVYMSQIEKYFLTDPLKNGSDKFSQYG 99 Query: 114 VSKKIPCISFQAGD--KVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + I + D +G FS E P +++ + ++ Sbjct: 100 IEPTIVKQQPKFLDNGFHQIGTFSFEVRHTPGHSPGSLSFIFKNFA 145 >gi|239828684|ref|YP_002951308.1| beta-lactamase [Geobacillus sp. WCH70] gi|239808977|gb|ACS26042.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 264 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++ +++D G+S + + I ++ ++L AI +TH H DH L Sbjct: 17 FYIETGQQRLLVDAGLSGKQLEQL--------FEQIDRDLRDLTAILVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E F G G +ES V+H Sbjct: 69 VIARKYKLPIYANEKTWKAMEGLI---GDIPTEQKFIFPLGKVRSFGDLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D D + + +L + Sbjct: 126 AEPMFYVFYHEGKKLALITDTGYVSDRMKGTIKNADVFIFESNHDVEMLRMGKYPWNVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEEAGLALADVIGDRTKRIYLAHLSQD 222 >gi|221195136|ref|ZP_03568192.1| beta-lactamase domain protein [Atopobium rimae ATCC 49626] gi|221185039|gb|EEE17430.1| beta-lactamase domain protein [Atopobium rimae ATCC 49626] Length = 276 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 28/152 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDITFI 61 L L G G N A+ + I++DCG+S + +D Sbjct: 7 LHILASGSSG----NAAIVE----GPQTSILVDCGLSRRELLRRSKELDIDT-------- 50 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+FITH H DH G L P++A+ +L + + V + Sbjct: 51 ----DCIAAVFITHEHSDHVGGLRVFAKHFDGPIFATSGTAHILSGRSSMDGVEFSLIST 106 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 Q VG S+++ +H + E + Sbjct: 107 DVQKC----VGEISVQAFSTSHDVAEPVGFRF 134 >gi|319893717|ref|YP_004150592.1| Zn-dependent hydrolase, beta-lactamase superfamily [Staphylococcus pseudintermedius HKU10-03] gi|317163413|gb|ADV06956.1| Zn-dependent hydrolase, beta-lactamase superfamily [Staphylococcus pseudintermedius HKU10-03] Length = 260 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + I ++ +L I +TH H DH L L Sbjct: 15 VESDKGSLLVDVGLTGKKMEAL--------FDQIDRKISDLSGILVTHEHSDHIKGLGVL 66 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVYA+ ++ K + +K F + + F IES V+H + Sbjct: 67 ARKYGLPVYANEKTWTCIDKKDSKIPLDQK---FVFNPHETKSIAGFDIESFNVSHDAID 123 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + + + +D + + +L + Sbjct: 124 PQFYIFHNNYKKFTMITDTGYVSERMKGMIRGSDAFMFESNHDVDMLRMCRYPWKTKQRI 183 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 184 LSDMGHVSNEDAAHAMKDVITGQTKRIYLSHLSQD 218 >gi|160880930|ref|YP_001559898.1| beta-lactamase domain-containing protein [Clostridium phytofermentans ISDg] gi|160429596|gb|ABX43159.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg] Length = 264 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 23/185 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLP--GVDLVFPDITFIMKERKNLMAIFIT 74 N G S+ +++D GVS + L GVD +L I IT Sbjct: 12 GNCIYIG----SNETNLLVDAGVSGKRIESGLLSAGVD------------PNSLDGILIT 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAI-GLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 H H DH + L +P+Y + I +L ++ + + + +G Sbjct: 56 HEHSDHIQGIGVLARRYKLPIYGTVETINAMLR--LSSVGRIEESQLRFVKPDEALCIGD 113 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 +E ++H + + I D D + + + L N + Sbjct: 114 ILVEPFSISHDASNPVCYTFTNGGHKIGMATDLGTYDSYTISKLCGAEVLYLEANHDVNM 173 Query: 194 LMCDS 198 LM S Sbjct: 174 LMVGS 178 >gi|150005583|ref|YP_001300327.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides vulgatus ATCC 8482] gi|254884502|ref|ZP_05257212.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 4_3_47FAA] gi|319640806|ref|ZP_07995519.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_40A] gi|149934007|gb|ABR40705.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides vulgatus ATCC 8482] gi|254837295|gb|EET17604.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 4_3_47FAA] gi|317387618|gb|EFV68484.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_40A] Length = 267 Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 19/164 (11%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + R I++D G+ G+ + + + Sbjct: 1 MKIKFISLASGSSG----NCYFLG----TDRYGILVDAGI--------GIRTIKKTLKEL 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+FITH H DH A+ L +PVY++P + Sbjct: 45 GIGLDIIRAVFITHDHADHIKAVGHLGEKFGIPVYSTPEVHAGINKSYCMTEKLSTCVHY 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ +++ F+I + V H + + + D Sbjct: 105 LHK-GETMELEDFTITAFEVPHDGTDNVGYCMNIDGKIFSFLTD 147 >gi|253578994|ref|ZP_04856265.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849937|gb|EES77896.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 264 Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 14/165 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+S + + + + K++ I ITH H Sbjct: 12 GNCIYVG----SDNTHLLVDVGISGKRVEQ--------GLNSLELTGKDIDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L + +PVYA+ + L + + ++ ++ Sbjct: 60 DHIKGLGVIARKHQIPVYATEGTVEALSHM--NLGKMPEGIFREIHEDEPFEINDLTVNP 117 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + H + + + ++ D ++ I+G++ + D+L Sbjct: 118 FTIPHDAAQPVGYRVECGEHSVGIATDLGKYNEYIVGNLQNLDAL 162 >gi|255658268|ref|ZP_05403677.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] gi|260849581|gb|EEX69588.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] Length = 537 Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 73/518 (14%), Positives = 150/518 (28%), Gaps = 86/518 (16%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + L G +IDCG+ + + + +F ++ Sbjct: 6 LGAAHTVTGSCYLLETG----EDRYLIDCGMFQGSKRIREYNYE--EFSF---NPADIDG 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 + +THAH DH G + L VYA+ L + ++ Sbjct: 57 VLLTHAHVDHCGLVPKLVREGFKGTVYATQATCDLAKIMLPDSAHIQESDA-EMLNRKGQ 115 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD----WKLDDDAILGDVTDKDSLCA 185 G +E + + + + P +H D + D ILG + + Sbjct: 116 RRGDAPVEPLYGINDALDALKQFSPVPYDQELHLSDNLRVFFRDAGHILGSAILEVYVKE 175 Query: 186 IGNE------------------------GILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 G E G ++ +ST R ++ I + Sbjct: 176 NGKETKLVFSGDLGQPDQPILRDPTIIHGADFVITESTYGDRLHQLYDKETALIEIVNET 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 + G +++ +F+ V R ++++ ++ G I + + + Sbjct: 236 MDRGGNLIIPSFA--VGRTQTLLY----YFFRLHREGR--LDPDIPIIIDSPLAINATRV 287 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQL-SRGEMRNVKLAEKDTVIFSSRAIPGNEV 340 ++F + + L V + + + E R + +E +I S+ + Sbjct: 288 FLKNFRDFDEDALKVFGKNGKVPDFPQVRLCETAAESRALNSSEGSAIIISASGMADAGR 347 Query: 341 AIGHIKNRLVEQGVRVIAEDAECP------------------------------VHVSGH 370 + H+K+ L ++ + S H Sbjct: 348 VLHHLKHNLWRPESTILFVGYQAEGCLGRRLIDGITRVRVLGEEIAVKAQIKSLDGFSAH 407 Query: 371 PYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPD 427 N + I +P + +HGE A K +E G + ++ Sbjct: 408 ADANQIMSWLGEITSPKPAKIFIVHGEATAQGALKSRIQKELGIECYVPFRGDLAKITGR 467 Query: 428 PIEIIDE----VVHGLFLKDGFLIGKFADLGIAKRRQL 461 EII V ++D + RR + Sbjct: 468 TAEIIPSNIPAVSVEKEMEDVLRDFDSDYRQLR-RRVM 504 >gi|15643428|ref|NP_228472.1| hypothetical protein TM0663 [Thermotoga maritima MSB8] gi|4981186|gb|AAD35747.1|AE001739_10 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 522 Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 66/498 (13%), Positives = 145/498 (29%), Gaps = 122/498 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI- 71 G IG N S ++D G++F + + + P I+ + L + Sbjct: 8 GHRNIGGNKIRV---VDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDLLKLKMVP 64 Query: 72 -----------------------FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA- 107 F++HAH DH G + + +P+ + ++ A Sbjct: 65 RLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLI--DEKIPLLMTGETFAVMRAS 122 Query: 108 ----------------------KRVYERVSKKIPCISFQAGDKVDVG-----AFSIESV- 139 K + + + + + + + +IE Sbjct: 123 VYTSNSNVLTQLGGKKRRKVNDKDLENGIREDLTVSPGNSKNAEKLTRRVSFPKNIEFND 182 Query: 140 ------------------RVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DAILGDVTD 179 V HS+ L R + +TGD++ D Sbjct: 183 DLTVVDVNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAEEERYWLD 242 Query: 180 ---KDSLC----------AIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAK 225 + L + ++ L L+ + T RE +EK + +N + + K Sbjct: 243 TLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENIENTEKDVFENAMRVFRGTK 302 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII----------- 274 +LV + R+ + + + + R++VL+ ++ + + Sbjct: 303 NLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTDEERSFVR 362 Query: 275 ---KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--EMRNV-----KLAE 324 +++ E L + ++ + + + G + ++ ++ Sbjct: 363 VYHPGKVTYINLEKDALLRAREEGILLSPEEINLHPEKHTMVAGYWDFPHILDLDERVLN 422 Query: 325 KDTVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVI-------AEDAECPVHVSGHPYPND 375 I S+ E I N L + H SGH P Sbjct: 423 GAVYIHSTSEAYTEEQEIDAKRFMNWLRYFNIIPFGIREVNGNIVFTKEFHASGHVSPQG 482 Query: 376 LKRMYQWIRPQVLVAIHG 393 L+++ + P +V +H Sbjct: 483 LEKILNELNPDYIVPVHT 500 >gi|225870883|ref|YP_002746830.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225700287|emb|CAW94546.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 270 Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I + Sbjct: 8 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRR 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + ++ VYA+ +++ + F+ Sbjct: 52 PEDLDAILITHEHSDHIKGVGIMARKYNLDVYANEKTWQMIDER-HMIGNLDVAQKHVFE 110 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G + G IES V+H + I + V D + D A + + D Sbjct: 111 RGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAGIIENAD 167 >gi|153840328|ref|ZP_01992995.1| cleavage and polyadenylation [Vibrio parahaemolyticus AQ3810] gi|149746009|gb|EDM57139.1| cleavage and polyadenylation [Vibrio parahaemolyticus AQ3810] Length = 135 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I+IDCG+ KD G DI F +K + A+ Sbjct: 15 GGKHTVTGSC----HELKLPHGSILIDCGLFQGKDIHFGNRRASLDIEFPVKH---IKAL 67 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 +THAH DH G L L + P+Y + L+ Sbjct: 68 VLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELVPLMLED 108 >gi|148980244|ref|ZP_01815952.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrionales bacterium SWAT-3] gi|145961338|gb|EDK26647.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrionales bacterium SWAT-3] Length = 446 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 81/465 (17%), Positives = 141/465 (30%), Gaps = 88/465 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + S + ++IDCG+ G D DI F L A+ Sbjct: 7 GGKHTVTGSC----HELRDSGQSVLIDCGL------FQGSDARPLDIDFETSH---LNAL 53 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCI----- 121 +TH H DH G L L + + P+Y + L +E + +S K + Sbjct: 54 LLTHTHIDHIGRLPWLLATGFNQPIYCTQATAELAPLMIEDGLKLQGLSHKQAKLILKKL 113 Query: 122 -----SFQAGDKVDV--------------GAFSIESVRVNHSIPETMALVIRSP-VGNIV 161 G+ + H I + + I+ P +V Sbjct: 114 HSLIAPKPYGEWFPIAAEQQNNGKVHGRPNTLYARLQPAGH-ILGSAYIEIKLPSQQVVV 172 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDI 220 +GD + +L D + L +ST I+ + + K I D Sbjct: 173 FSGDLGPSNTPLLPDPM--------PPQQADYLFIESTYGTSTHDDIATRAERLKAIIDR 224 Query: 221 MKNAKGCVLVTTFSSSVSRIRS--------IIDIAEQIGRKIVLLG-------SSLKRVV 265 G +L+ FS + R + I + I+L S +R Sbjct: 225 SLLDGGVILIPAFS--IGRTQELLFDIEQLIFEHQLSADIPIILDSPMALKVTRSYRRFK 282 Query: 266 SV----------AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 + + + + + +L + S + Q R Sbjct: 283 ELWGQEAKQRLELKRHPLAFEQCITVDGHRMHKKIVNRLRSTGGPAIVVAASGMCQGGRI 342 Query: 316 EMRNVKLAEKDT-----VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 L + + G E+ G ++ + + V V A+ S H Sbjct: 343 MNYLSALLPDKRTDVILAGYQAHGTLGRELQQGEMQVSIDSKQVEVNAQ-IHGMSGYSAH 401 Query: 371 PYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACV 413 DLKR I P+ + IHGEP + +++G V Sbjct: 402 ADQEDLKRFIAGIPVAPKEVHLIHGEPDTQSEFAQELIKQGFNVV 446 >gi|212693391|ref|ZP_03301519.1| hypothetical protein BACDOR_02904 [Bacteroides dorei DSM 17855] gi|237726956|ref|ZP_04557437.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. D4] gi|265756539|ref|ZP_06090745.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_33FAA] gi|212664035|gb|EEB24609.1| hypothetical protein BACDOR_02904 [Bacteroides dorei DSM 17855] gi|229433812|gb|EEO43889.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides dorei 5_1_36/D4] gi|263233727|gb|EEZ19342.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_33FAA] Length = 267 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + R I++D G+ G+ + + + Sbjct: 1 MKIKFISLASGSSG----NCYFLG----TDRYGILVDAGI--------GIRTIKKTLKEL 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+FITH H DH A+ L +PVY++P + Sbjct: 45 GIGLDIIRAVFITHDHADHIKAVGHLGEKFGIPVYSTPEVHAGINKSYCMTEKLSTCVHY 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ +++ F+I + V H + + I D Sbjct: 105 LHK-GETMELEDFAITAFEVPHDGTDNVGYCINIDGKIFSFLTD 147 >gi|156390186|ref|XP_001635152.1| predicted protein [Nematostella vectensis] gi|156222243|gb|EDO43089.1| predicted protein [Nematostella vectensis] Length = 338 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 125/352 (35%), Gaps = 59/352 (16%) Query: 55 FPDITFIMK--ERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 PD F++ ++ I F++H H DHYG L P+Y S L+E+K Sbjct: 8 IPDTPFVVDAFRYGSIPGIKVYFLSHFHYDHYGG---LKKGFSHPIYCSKVTANLVESKI 64 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKL 168 + + V V + + NH P + L+ P I+HTGD++ Sbjct: 65 K----VSQRYIKALPMDTPVIVDKVQVTLLDANH-CPGAVLLLFELPNGKTILHTGDFRA 119 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-----IKKNIYDIMKN 223 + +S A+ N+ I L D+T + T ++ + K + +N Sbjct: 120 SREM--------ESYPALANKTIDTLYLDTTYCDPQYTFPKQEETINFAVTKAAQAVSEN 171 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 K ++ T++ + + + + IA+++G K+ ++ D+ + D Sbjct: 172 PKTLIVCGTYT--IGKEKVFLAIAKELGCKV------------------TVQSDKKRILD 211 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAI----PGNE 339 + + VI T L + + +++ +R + G E Sbjct: 212 SLESDFIQS---VITTDKSEGRIHVLP-MGKLNHQHLSSYMDQFKGKFTRVVAFKPTGWE 267 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 G + + V S H ++KR Q+ RP +V Sbjct: 268 HKSGPL----SATRPVTKGPISIYGVPYSEHSSYEEMKRFVQFTRPTKIVPT 315 >gi|242220452|ref|XP_002475992.1| predicted protein [Postia placenta Mad-698-R] gi|220724781|gb|EED78801.1| predicted protein [Postia placenta Mad-698-R] Length = 825 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 71/424 (16%), Positives = 132/424 (31%), Gaps = 70/424 (16%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFP---KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 L G G K I+ D GV LP VD + D + + + ITH H Sbjct: 10 TLLGAGQEYRGKTIVCDAGVHPAYSGIASLPFVDEL--DWS-------TVDVLLITHFHL 60 Query: 79 DHYGALHDLWSFLHV-----PVYASPFAIGLLEAKRVYE-----------------RVSK 116 DH AL + + VY + L + ++S Sbjct: 61 DHAAALTYITEKTNFRDGKGKVYMTHPTKALHKFMMQDFVRMSSSTSDALFSPLDIQMSL 120 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + H + +I I++TGD+ ++D L Sbjct: 121 SSIIPVSAHQVITPCPGVTFTPYHAGH-VLGACMFLIDIAGLKILYTGDYSREEDRHLVK 179 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSS 235 + L+ +ST ++ EK ++ N+ + G VL+ TF+ Sbjct: 180 -------AEVPPIRPDVLIIESTYGVQTLEGREEKELRFTNLVHSIIRRGGHVLLPTFA- 231 Query: 236 SVSRIRSIIDIAEQI--------GRKIVLLG----SSLKRVVSVAIDVG-----IIKKDQ 278 + R + ++ I ++ I S+ + + K Sbjct: 232 -LGRAQELLLILDEYWKKHPDLQNVPIYYASSLARKSMAVYQTYIHTMNSNVRSRFAKRD 290 Query: 279 LFLSDESFGLYPREQLI--VIATGSQGEPRSALAQLSRGEMR----NVKLAEKDTVIFSS 332 + P+ + IA G ++ ++ G R ++ VI + Sbjct: 291 NPFVFKHISNLPQSKGWERKIAEGPPCVVLASPGFMTSGASRELLELWAPDSRNGVIITG 350 Query: 333 RAIPG-NEVAIGHIKNRLVE-QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 +I G I +V +GV + + + + S H + + I+ Q +V Sbjct: 351 YSIEGTMAREIQSEPEEIVSLKGVPIPRKISVDEISFSAHVDYSQNSEFIEMIKAQHIVL 410 Query: 391 IHGE 394 +HGE Sbjct: 411 VHGE 414 >gi|170694222|ref|ZP_02885377.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] gi|170140962|gb|EDT09135.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] Length = 484 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 77/264 (29%), Gaps = 48/264 (18%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + + +IDCG+ F +L + + + L A+ +THAH Sbjct: 11 GRNRHWFQVPAGRRGAADLIDCGL-FQGTK----NLRLRNWNPLPVDIGTLDAVILTHAH 65 Query: 78 EDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------------------ERVSKK 117 DH G L L PVY + L E R + Sbjct: 66 LDHCGYLPVLTRMGYRGPVYCTRGTRDLCEIMLRDSARLQEEEAAYANRHGRSKHRPALP 125 Query: 118 IPCISFQAGDKVDVGA--FSI----------ESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F + + H I + ++V+ I +GD Sbjct: 126 LYTVEDAEHALELLEPRDFDVPKRLNEHACFRLLPAGH-ILDAASVVLCVEGKVIAFSGD 184 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 D + L+ +ST R ++ Sbjct: 185 IG--------RPEDPIMRAPMPLAHADYLVVESTYGDRLHEKTDPAAELAEVFTSTFRRG 236 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQ 249 G V++ F+ V R +SI+ Q Sbjct: 237 GIVVIPCFA--VGRAQSILHYIAQ 258 >gi|85707033|ref|ZP_01038122.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] gi|85668474|gb|EAQ23346.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] Length = 460 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 81/278 (29%), Gaps = 56/278 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F LG G + + L + I+IDCG+ F P Sbjct: 8 KLRF--LGAAGTVTGSRYLIEAL----GRRILIDCGL-FQGFKQLRARNRKPFP----VR 56 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL------------------L 105 + + +THAH DH G L L V + L Sbjct: 57 VNTIDTVLLTHAHLDHSGYLPALIRAGFRGRVLCTEATADLCGLILPDSGHIQEEEARFA 116 Query: 106 EAKRVYERVSKKIPCISFQAG---DKVDVGAFSI----------ESVRVNHSIPETMALV 152 K + K A D+ D+ F + H + + Sbjct: 117 ARKGYSKHKKPKPLYTLKDAKAALDRFDLQPFDRRIDLGDGIAARFIPAGH-LLGAAQIR 175 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC-ISEK 211 + + +GD D D ++ G L+C+ST R + E Sbjct: 176 LEVGGRVVHFSGDLGHDPDPLMRPP--------QPFGGADVLVCESTYGNRSHSDVDPEA 227 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G VL+ +F+ V R + ++ + Sbjct: 228 ELAPILKRTFARG-GTVLIPSFA--VGRAQGLMLHIAR 262 >gi|331003772|ref|ZP_08327266.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412155|gb|EGG91550.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] Length = 264 Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 16/211 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 S I++D G+S K + +L +++ IF+TH H DH L Sbjct: 19 SENTHILVDAGISNKKIETRLNELGLC--------GRDISGIFLTHEHSDHIAGLEVFVR 70 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYAS + L+ + Y +++ I + + +G + + ++H E Sbjct: 71 KNEIPVYASEGTLKYLKDRDKYSKITDYFHIIESK--RHIRLGDLDVLAFDIDHDANEPF 128 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + S I D I+G +++ D+L N I L Sbjct: 129 GYRVESGDKKIAVATDLGRYTKDIVGYLSNLDALLIEANHDIRMLETG------PYPYEL 182 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ I + G ++ + + +I Sbjct: 183 KRRILSEKGHLSNENSGKLICEILNDRIKKI 213 >gi|320355007|ref|YP_004196346.1| beta-lactamase domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320123509|gb|ADW19055.1| beta-lactamase domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 257 Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 19/160 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L G+ ++ID G F +L + I Sbjct: 1 MRFSVLG-SGSKG-NCTLVEAGTTR----LLIDNG--FSGKEL------IARLHSIDVRP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI +TH H+DH + + ++PVYA+ + +RV + F Sbjct: 47 ETLTAIVVTHEHDDHVKGIGVVSRRFNLPVYANAAT-----HRAAEQRVGQVRERHEFGT 101 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ + I V+H + + V+ + + D Sbjct: 102 GESFTINDLHIHPFAVSHDTADPVGFVVSDGRSALGYCTD 141 >gi|303242993|ref|ZP_07329448.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] gi|302589461|gb|EFL59254.1| RNA-metabolising metallo-beta-lactamase [Acetivibrio cellulolyticus CD2] Length = 544 Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 80/558 (14%), Positives = 153/558 (27%), Gaps = 106/558 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPD 57 M N ++ F LG + + L + ++DCG+ +D L D Sbjct: 1 MLNMKITF--LGAAKTVTGSCYLVE----TQSTKFLVDCGLFQGHVKEDALNAEDFPI-- 52 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLL----------- 105 L IF+THAH DH G + ++ +YA+ L Sbjct: 53 ------NPSELDYIFLTHAHIDHSGRIPKIYIEGFKGEIYATKATAELCAIMLPDCGHIQ 106 Query: 106 --------EAKRVYERVSKKIPCISFQAGDKVDV-------------GAFSIESVRVNHS 144 + + + + A D + + ++ H Sbjct: 107 EFENEWQNKKRLRAGKPPVEPIYTYQDALDCISLFKKVNYGEAIKINDEIKVKFNDAGH- 165 Query: 145 IPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 I + + +V +GD IL D + EG L+ +ST Sbjct: 166 ILGSAIIEFWIQEKGKETKVVFSGDLGNKGMPILK---DPSII-----EGADYLVIESTY 217 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII-----------DIAEQ 249 R + + + I + V S SV R + +I + ++ Sbjct: 218 GNRLHKDNGNR-FEDFVDIINETINNGGNVVIPSFSVGRTQEVIYELNKEKEKYDEKLKK 276 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 + V + S L + + D+ G P + + T S E R+ Sbjct: 277 LFSTPVFVDSPLAISATEVFRNNLDCYDEEAREYIDNGDNPLDFPGLQFTRSAEESRALN 336 Query: 310 AQLSR---------------GEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 + L ++ T++F G + + Sbjct: 337 ERTDSAIIISASGMCEAGRIKHHLKHNLWRKESTILFVGYQAQG--TLGRKLVDGAKRVK 394 Query: 354 VRVIAEDAECPV----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 + + SGH N L +P + +HGE ++ Sbjct: 395 IFGEDISVNARIEMLEGFSGHADKNGLLEWLGGFNKKPSKVFIVHGEEESMIEFSSEIKN 454 Query: 408 EGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHL 467 + G+ + D + E V + + + +LS Sbjct: 455 KFNIETIIPEKGESFIITADKVLEASEKVKSAISFKRLAVIDVLETLKEEIDELSE---- 510 Query: 468 SVNVLLDNHYNIFGVPEI 485 VL+++ E+ Sbjct: 511 ---VLMNDLKKEKSDVEV 525 >gi|302879753|ref|YP_003848317.1| cyclic-AMP phosphodiesterase class-II [Gallionella capsiferriformans ES-2] gi|302582542|gb|ADL56553.1| cyclic-AMP phosphodiesterase class-II [Gallionella capsiferriformans ES-2] Length = 254 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 62/172 (36%), Gaps = 35/172 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG N+ + I+ID G + L KE + Sbjct: 6 LGCSGGIGGNLHTTSFLIDRD---ILIDAGTGVGELSL--------------KEMSEIDH 48 Query: 71 IFITHAHEDHYGALHDLWSFLH------VPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 IFITHAH DH +L L + V VYA+ + +L+ + I Sbjct: 49 IFITHAHMDHICSLPLLMDSVGGMRARPVTVYAAQATLEMLQRHIFNWEIWPDFSEIPNV 108 Query: 125 AG-----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 A + + + I SV H++P + I S ++V +GD Sbjct: 109 AHPVMRYQAMELGEVITLQGRKISSVPAVHAVP-AVGYHIDSGEASLVFSGD 159 >gi|237710449|ref|ZP_04540930.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229455171|gb|EEO60892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 267 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + R I++D G+ G+ + + + Sbjct: 1 MKIKFISLASGSSG----NCYFLG----TDRYGILVDAGI--------GIRTIKKTLKEL 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+FITH H DH A+ L +PVY++P + Sbjct: 45 GIGLDIIRAVFITHDHADHIKAVGHLGEKFGIPVYSTPEVHAGINKSYCMTEKLSTCVHY 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ +++ F+I + V H + + I D Sbjct: 105 LHK-GETMELEDFAITAFEVPHDGTDNVGYCINIDGKIFSFLTD 147 >gi|315650937|ref|ZP_07903977.1| metallo-beta-lactamase superfamily protein [Eubacterium saburreum DSM 3986] gi|315486783|gb|EFU77125.1| metallo-beta-lactamase superfamily protein [Eubacterium saburreum DSM 3986] Length = 264 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 16/206 (7%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I++D G+S K + +L ++ IF+TH H DH L +P Sbjct: 24 ILVDAGISNKKIETRLNELGLC--------GSDISGIFLTHEHSDHIAGLEVFVRKNKIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 V+AS + LE + Y + + + + +G +I++ ++H E + Sbjct: 76 VFASRGTLRYLEDRDKYYSIVDYFHTVESK--KNISLGDLNIKAFDIDHDANEPFGYRVE 133 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 I D I+ +++D D+L N I L ++ I Sbjct: 134 CGNKKIAVATDLGRYTMDIVNNLSDLDALLIEANHDIRMLETG------PYPYELKRRIL 187 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRI 240 N + G ++ + + +I Sbjct: 188 SNKGHLSNENSGKLICEILNDKIKKI 213 >gi|224104292|ref|XP_002333964.1| predicted protein [Populus trichocarpa] gi|222839280|gb|EEE77617.1| predicted protein [Populus trichocarpa] Length = 169 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 22/127 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L PLG E+G + + K ++ DCG+ + P I Sbjct: 23 DQLTLTPLGAGNEVGRSCVYMSF----KGKTVLFDCGIHLAYSGM----AALPYFDEID- 73 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF------------LHVPVYASPFAIGLLEAKRVY 111 + + +TH H DH +L V+ + + + Sbjct: 74 -PSTIDVLLVTHFHLDHAASLPYFLEKDQSNMFTLYQTTFRGRVFMTHATKAIYKLLLTD 132 Query: 112 ERVSKKI 118 K+ Sbjct: 133 YVKVSKV 139 >gi|325265071|ref|ZP_08131798.1| VicX protein [Clostridium sp. D5] gi|324029761|gb|EGB91049.1| VicX protein [Clostridium sp. D5] Length = 265 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 13/164 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+ +D + + + + L I ITH H Sbjct: 12 GNCIYVG----SDHTHLLVDTGI-----SKKKIDAGLKE---LEIKGEELDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L VP+YA+P I +E + + +G I+ Sbjct: 60 DHIQGLGVFSRKYEVPIYATPGTIEGIENY-APLGKMPEGLLHPIHTDESFMLGDIMIDP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 R++H E + + D + DD + + D D+ Sbjct: 119 FRISHDAREPSGYRMNCGGKAVAVATDLGIYDDYTVEKLKDLDA 162 >gi|163943142|ref|YP_001648026.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163865339|gb|ABY46398.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 264 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|148240987|ref|YP_001220488.1| putative metallo-beta-lactamase family protein [Bradyrhizobium sp. BTAi1] gi|146411363|gb|ABQ39816.1| putative Metallo-beta-lactamase family protein [Bradyrhizobium sp. BTAi1] Length = 454 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 34/267 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L S ++IDCG+ L + + E Sbjct: 3 LKLSFLGGAGTVTGSKYLLE----SISHRLLIDCGLFQGGRTLREM-----NWKRFAVEP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + A+ +THAH DH GAL L + + S L E ++ Sbjct: 54 AGISAVVLTHAHLDHSGALPLLVKQGFNGMILCSEATAALCEVLLRDSGHLQEQDAKYAS 113 Query: 125 AGDKVDVGA----------------FSIESVRVNHSIPETMALVIRSPVGNI-VHTGDWK 167 S + +P LV+R + + + + Sbjct: 114 KRGFSRQKPALPLYTVKDAEAALRLLRPISFHADCELPGGGNLVLRRAGHILGAASVELE 173 Query: 168 LDDDAILG-----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 + ++ D L+ +ST R + + + + Sbjct: 174 WERTSVAFSGDLGRHDDPIMFEPEPLVKGDYLIVESTYGDRSHPKVDPQRAIEEVVGATT 233 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G V++ F+ V R ++++ E+ Sbjct: 234 KRGGTVVIPAFA--VGRAQALLYYFER 258 >gi|167747102|ref|ZP_02419229.1| hypothetical protein ANACAC_01814 [Anaerostipes caccae DSM 14662] gi|167654062|gb|EDR98191.1| hypothetical protein ANACAC_01814 [Anaerostipes caccae DSM 14662] Length = 259 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 9/174 (5%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S +++DCG+S + + + L I ITH H DH L Sbjct: 14 SIFVGSKETKLLVDCGIS--------AKRIEKSLDELDTRASELSGILITHEHSDHIKGL 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +PV+A+ I + R Y K +A + ++E+ V H Sbjct: 66 GVMLRRYGLPVFATAKTIDAVLDSR-YIGKVDKDLFHPIEADHPFQLDDITVEASHVWHD 124 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + + S D D+ ++ + D L N + L S Sbjct: 125 AADPVCYSFYSEGFKASIATDLGDYDEYLVEKIRDSHILFVEANHDVNMLQVGS 178 >gi|297170850|gb|ADI21869.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured verrucomicrobium HF0130_25O04] Length = 267 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 27/162 (16%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITF 60 E+ F LG N A+ +S I+ID G+S K G+++ Sbjct: 4 EIYFKILGSSSS--GNAAVLR----TSESTILIDAGLSCKKLHFLLKEEGIEI------- 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + L A+F+TH H DH + L + ++PVYA+ + ++AK + Sbjct: 51 -----EELDAVFLTHEHNDHSAGIRGLSKYCNLPVYANQDTVQAVQAKL-----PRPPNW 100 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 F+ G +F + V H + + + + Sbjct: 101 KIFETGAPFSFRSFKVHPFSVPHDAYDPVGFYFEWGKEDDLF 142 >gi|317153500|ref|YP_004121548.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] gi|316943751|gb|ADU62802.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] Length = 535 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 76/541 (14%), Positives = 139/541 (25%), Gaps = 118/541 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE- 64 + +G + + + + K +DCG+ + I K Sbjct: 1 MKITFMGAARTVSGSCYIIE----CAGKRFAVDCGLHQGNRE-------------IEKRN 43 Query: 65 -------RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------- 109 K L I +THAH DH G L L S PVY + L+E Sbjct: 44 WNLDQYGPKKLDFILLTHAHIDHSGLLPGLVSKGFRNPVYCTAPTRDLVEIMLLDSAHIQ 103 Query: 110 -------------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + + V + H Sbjct: 104 EMEAEWSNRKSLRTGSKAGKPLYTIADAENAIPLLATVEYDKVFEPVPGVRVVYKNAGH- 162 Query: 145 IPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 I + + I V +GD + I+ D D ++ + +ST Sbjct: 163 ILGSAFIEIEYIHEGKKTKAVFSGDLGRPEQLIVQDPDDMEA--------ADYIFLESTY 214 Query: 201 AMREGTCISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 R + K I KN + V+ +I + + + GR + Sbjct: 215 GNRNHPDDEHSLDELAKAIDYSYKNREKVVIPAFAVERSQQIIYSLFLLRKQGRLPADMP 274 Query: 259 --------------------------SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 R +D+ + + ++ Sbjct: 275 IYLDSPLAIRATEIFRKHPEFYDEKTQEFIRNGEHPLDLPNLHFTESREQSQAINESVGP 334 Query: 293 QLIVIATG--SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 +++ A+G + G + L +V V R I G I + N V Sbjct: 335 AVVISASGMANAGRVKHHLRHNLWRPGASVVFVGWQGVGTPGRKILGGAKKI-RLFNEEV 393 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQV--LVAIHGEPLHLVAHKELALQE 408 ++ + SGH +DL ++ + ++ IHGE L Sbjct: 394 AVAAKIFTING-----FSGHAGQDDLLGWLGTMQGRSVKVILIHGEAEVQKEFASLITAR 448 Query: 409 GIACVPPVR--------NGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK-RR 459 V G+ + D V ++D + + + R Sbjct: 449 YGFEVHIPEYMEELELTPGREMEAVVDMAVARPRVDWEFLMRDSENLYEELRQRVKDVRN 508 Query: 460 Q 460 + Sbjct: 509 R 509 >gi|210624116|ref|ZP_03294197.1| hypothetical protein CLOHIR_02153 [Clostridium hiranonis DSM 13275] gi|210153192|gb|EEA84198.1| hypothetical protein CLOHIR_02153 [Clostridium hiranonis DSM 13275] Length = 267 Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 50/141 (35%), Gaps = 16/141 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N GY I+ID G+S K G+ + + NL IF Sbjct: 8 GSGSCG-NCHFVGY----KDTNILIDAGLS-GKRITDGIKDI-------GENPDNLKGIF 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH + ++P++A+ ++ K + + F+ +G Sbjct: 55 ITHEHIDHIRGAGIVSRKFNIPIFANVETWRAMKDKL---GKIESSNMVVFENDKNYAIG 111 Query: 133 AFSIESVRVNHSIPETMALVI 153 I + H + + Sbjct: 112 DIIIRPFSIEHDAANPVGYNL 132 >gi|323486399|ref|ZP_08091724.1| hypothetical protein HMPREF9474_03475 [Clostridium symbiosum WAL-14163] gi|323400381|gb|EGA92754.1| hypothetical protein HMPREF9474_03475 [Clostridium symbiosum WAL-14163] Length = 295 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 18/211 (8%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG GE G + + YG + + ++DCG+ D P P +E + Sbjct: 8 GGYGEHGRSCFMVEYG--TEGRCYIVDCGIM---DTDP-----VPWPAVTPEELAQADFL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAI---GLLEAKRVYERVSKKIPCISFQAGD 127 F+TH H+DH GA + S + G+ K + ++ ++ Sbjct: 58 FLTHCHKDHAGAFGYFAEQGFRGWLVTSQVTLRLSGIAYNKILILDETEDNREGEGKSLA 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + + R H P + +I+ +G +GD++ D + + D Sbjct: 118 DIGYKTVRVNYGRSGH-CPGGLWFLIKDELGACFFSGDYQED---TVFYLCDPVRNREAQ 173 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I + ++ + +++ + Sbjct: 174 LAIIDCAHESTGLGAKKLRQALIRRVREKLE 204 >gi|291520588|emb|CBK75809.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Butyrivibrio fibrisolvens 16/4] Length = 242 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 13/165 (7%) Query: 36 MIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 MID G+S + + D D+ + +TH H DH L + H Sbjct: 1 MIDAGISGKRIEAGMNKYDYTTADMA----------GLLVTHEHSDHVSGLGVIARKYHT 50 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 P+Y + I + + + + +G+ I ++H + +A I Sbjct: 51 PIYGTAATIKAIRS-MKSLGAIDDTLFHVIRPDEDFSIGSLKIHPFHISHDAADPVAYRI 109 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + + D D I+ ++T D+L N I L S Sbjct: 110 ENANSKVAVCTDLGYYDGYIVDNLTGLDALLLEANHDIHMLEVGS 154 >gi|255505677|ref|ZP_05347507.3| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] gi|255266491|gb|EET59696.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] Length = 537 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 74/506 (14%), Positives = 144/506 (28%), Gaps = 101/506 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M++ +L F+ G E+ + + I+IDCG+ + V L Sbjct: 1 MQSLKLTFI--GATHEVTGSCTFLEACGKN----ILIDCGMEQGINSFENVPLPVA---- 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------- 111 ++ +F+THAH DH G L L+ ++A+ L Sbjct: 51 ----AADIDMVFLTHAHIDHSGKLPLLYKNGFRGQIFATCATERLCRIMLRDSAHIQMFE 106 Query: 112 ----------------------ERVSKKIPCISFQAGDKV--DVGAFSIESVRVNHSIPE 147 E + C + +++ SI V H + Sbjct: 107 AEWRNRKAKRSGKAEYIPLYTVEDAEGVLKCFVGRDYEEIVPVADGISIRFVDAGH-LLG 165 Query: 148 TMALVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + ++ + IV +GD I+ D + ++ +ST R Sbjct: 166 SSSIEVWISEEGIQKKIVFSGDIGNLHQPIIRDP--------HYIKNADYVVMESTYGDR 217 Query: 204 EGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 + + + I G V++ F+ V R + ++ QI + + Sbjct: 218 SHGPRPDYIADLTEIIQKTFDRG-GNVVIPAFA--VGRTQEMLYFIRQIKEEKRI---KN 271 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNV 320 V +D + + + + E +I G L ++ + + + Sbjct: 272 HDNFEVYVDSPLAVEATKIFMERMHEDFDDEASALIDRGVNPISFPGLKTAVTSDDSKAI 331 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC----------------- 363 E VI S+ + H+K+ L ++ + Sbjct: 332 NFDENPKVIISASGMCDAGRIKHHLKHNLWRPESTILFVGYQSVGTLGRAIVEGAKQVKL 391 Query: 364 -------------PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQE 408 VSGH L RPQ + +HGE + E Sbjct: 392 FGEEIEVRAEIRVLAGVSGHADREGLLAWILAFEQRPQQVFVVHGEDASCTSFAERVQSS 451 Query: 409 GIACVPPVRNGKMLRLFPDPIEIIDE 434 +G + L + + Sbjct: 452 SGMKAMAPYSGTVYDLAAGSFVTVAQ 477 >gi|312135093|ref|YP_004002431.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] gi|311775144|gb|ADQ04631.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] Length = 540 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 60/495 (12%), Positives = 135/495 (27%), Gaps = 93/495 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ + +IDCG+ G+ + Sbjct: 1 MKITFIGGAQSVTGSCFLFEF----EGIKFLIDCGM-----FQGGLTEELLNYEAFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL---------------LEAK- 108 + + ++HAH DH G + L+ +Y + + L +E K Sbjct: 52 SEIKFVILSHAHIDHSGRIPKLYKDGFRGVIYTTDATVDLCNIMLPDSAHIQESEIEWKN 111 Query: 109 ----------------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 K S H + + + Sbjct: 112 RKRKREGKEQLKPLYTLEEAENVLKHFRGVKYDQKVQINKNLSFVFKDAGH-MLGSAIIE 170 Query: 153 IRSPVGNIVHTGDWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTCISE 210 + + +T + D + + + D + +G L +ST R G ++ Sbjct: 171 LYITEDSKEYTLVFSGDLGNRNVPILKDPTII-----DGCDYLFIESTYGNRFHGDVENK 225 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------------------- 249 +I + G V++ +F+ V R + I+ + Sbjct: 226 SKKLIDIICTTISNGGKVIIPSFA--VGRTQEILYEIAKEIVTHSEKAKVIRDVEIFVDS 283 Query: 250 ---------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF----LSDESFGLYPREQLIV 296 + I + + + + ++ L + + + + I+ Sbjct: 284 PLATSATAIYKKHIEYF--DAEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKSCII 341 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I++ E L + + + K + Sbjct: 342 ISSSGMCEAGRIKHHL---KHNLWNEKNTVLFVGYQAPNTLGRKLLEGQKKVKIFGEEVE 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + E SGH L +++ +P+ + +HGE + E A V Sbjct: 399 VKAKIEYIEAYSGHADKGGLFSWIEYMSEKPKKIFVVHGEKEVQLEFAEELKNRFGADVI 458 Query: 415 PVRNGKMLRLFPDPI 429 G+M + P+ + Sbjct: 459 VPARGEMYEIGPEYV 473 >gi|110802160|ref|YP_699862.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110682661|gb|ABG86031.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 263 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 65/232 (28%), Gaps = 23/232 (9%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S R I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSERTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS---TNA 201 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKHKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 ++ + + + G +V + R + ++ Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMNHDKHRKIILGHLSNTNNVP 225 >gi|312793458|ref|YP_004026381.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180598|gb|ADQ40768.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 540 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 74/522 (14%), Positives = 157/522 (30%), Gaps = 98/522 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ K ++DCG F G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLFE----LEGKKFLVDCG-MFQG----GLTEELLNYESFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + ++HAH DH G + L+ +Y + + L Sbjct: 52 SEIEFVILSHAHIDHSGRIPKLYKDGFRGVIYTTDATMDLCSIMLPDSAHIQESEIEWKN 111 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALV 152 + KR + + + + S H + + + Sbjct: 112 RKRKREGKELLLPLYTLEDAENVLKHFRGVRYGQKIQIDKNLSFVFKDAGH-MLGSAIVE 170 Query: 153 IRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD + IL D + +G L +ST R + Sbjct: 171 LYIKENGKEYKLVFSGDLGNRNVPILK---DPAII-----DGCDYLFIESTYGNRLHVDV 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 K K + DI+ G V++ +F+ V R + I+ + + + R V Sbjct: 223 ENKS--KKLIDIISTTISNGGKVIIPSFA--VGRTQEILYEIAK-EISTDSEEAKIIRNV 277 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG-EPRSALAQLSRGEMRNVKLAE 324 + +D + + + + E + I G EP + S E + + + Sbjct: 278 EIFVDS-PLATSATAIYKKHIDYFDAEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYD 336 Query: 325 KDTVIFSSRAI--PG-----------NEVA-------------IGHIKNRLVEQGV---- 354 K +I SS + G NE + + + + Sbjct: 337 KSCIIISSSGMCEAGRIKHHLKHNLWNEKNTVLFVGYQAPNTLGRRLLDGQKKVKIFGEE 396 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIAC 412 + E SGH + L + + +P+ + +HGE + + Sbjct: 397 VEVRAKIEYIEAYSGHADKSGLFSWIEQMSEKPKKIFVVHGEKEVQLEFAKELQNRFNTD 456 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHG-LFLKDGFLIGKFADL 453 V G+M + P+ + + + + ++ + D+ Sbjct: 457 VIVPARGEMYEIAPEYVAQSERLFSELPSFINLSVLAQIEDI 498 >gi|288554577|ref|YP_003426512.1| metallo-beta-lactamase family protein YycJ [Bacillus pseudofirmus OF4] gi|288545737|gb|ADC49620.1| metallo-beta-lactamase family protein YycJ [Bacillus pseudofirmus OF4] Length = 264 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 11/143 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + K +++D G+S K D T I + K L I ++H H DH + Sbjct: 17 IYVEADDKKLLVDVGLSGKKMDEL--------FTEIGRNPKELDGILVSHEHSDHIKGVG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 +P++A+ +E F + G +ES V+H Sbjct: 69 VFARKHKLPIFANEKTWLAMENNL---GTIPTDQKFIFATEEVKSFGGLDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 E M +V D Sbjct: 126 AEPMFYCFHHAGKKLVLATDMGY 148 >gi|229099889|ref|ZP_04230812.1| hypothetical protein bcere0020_51070 [Bacillus cereus Rock3-29] gi|229106049|ref|ZP_04236668.1| hypothetical protein bcere0019_51730 [Bacillus cereus Rock3-28] gi|229118952|ref|ZP_04248297.1| hypothetical protein bcere0017_52150 [Bacillus cereus Rock1-3] gi|228664477|gb|EEL19973.1| hypothetical protein bcere0017_52150 [Bacillus cereus Rock1-3] gi|228677368|gb|EEL31626.1| hypothetical protein bcere0019_51730 [Bacillus cereus Rock3-28] gi|228683504|gb|EEL37459.1| hypothetical protein bcere0020_51070 [Bacillus cereus Rock3-29] Length = 258 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 8 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 55 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 56 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVES 112 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 113 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 142 >gi|227499050|ref|ZP_03929187.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus sp. D21] gi|226904499|gb|EEH90417.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus sp. D21] Length = 538 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 75/500 (15%), Positives = 148/500 (29%), Gaps = 90/500 (18%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M ++ F LG + + + GS K I++DCG F L + + Sbjct: 1 MTIMKIRF--LGADKVVTGSCHMLEVGS----KKILLDCG-MFQGPKL----IRSLNRKP 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 + A+ ++HAH DH G L L P+Y + L E ++ Sbjct: 50 FAFHPGEIDAVVLSHAHVDHSGLLPRLVKEGFKGPIYCTHVTKELCEILLPDCGHIQEQD 109 Query: 119 ------------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPE 147 + + ++ +I H + Sbjct: 110 AEIETRKGLRKGKEAVTPLYTVDDAYLALKQFVCHDYDENFEICDGVTIRFRVAGHILGS 169 Query: 148 TMALVI---RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + VI +++TGD + + D L G ++ +ST R Sbjct: 170 ALVNVIVRENGKETKLIYTGDIG---QPNVPILDDPHQLS-----GADFIITESTYGNRV 221 Query: 205 GTCIS-EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ---IGRKIVLLGSS 260 E + + I D + G +++ F+ V R + ++ ++ G+ + Sbjct: 222 HETADREAELLEIIKDALSRG-GNIIIPAFA--VGRTQVMLYYFQKLMSSGKLPTVPI-- 276 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI---------------ATGSQGEP 305 + ++ + +E+ +Y ++ +I A P Sbjct: 277 MVDSPMAIKATKVMLFNPDEYDEEARSIYQKQGGRLIDMPNVHYTETPEESRAINDMPSP 336 Query: 306 RSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE-- 362 ++ + R + + + S I A G + +LV+ +V E Sbjct: 337 MIIISASGMADAGRVLHHLKHNLWRKDSSVIFAGYQAEGSLGRQLVDGAKKVKIMGEEIV 396 Query: 363 ------CPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 S H + + +Y+ + RP +HGE EL E Sbjct: 397 VGAKIYNMTGFSAHADKHQMMDLYKGMIRRPNAFFVVHGEYDSAATFAELLRTELGTAAY 456 Query: 415 PVRNGKMLRLFPDPIEIIDE 434 G + II Sbjct: 457 IPNYGDTAVIDGTQWHIIPT 476 >gi|197303214|ref|ZP_03168256.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] gi|197297754|gb|EDY32312.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] Length = 265 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 17/166 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S +++D G+S ++ L +DL + +L I ITH Sbjct: 12 GNCIYVG----SDNTHLLVDTGISKKRIEEGLKTLDL----------KGNDLNGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L +P+YA+ + +++ + + +G I Sbjct: 58 HSDHIQGLGVFSRKYQIPIYATKGTLEGIKSY-SGLGKMPEGLYHPIHTDEPFTLGDIDI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++H E + ++ D D + ++ + D+ Sbjct: 117 HPFEISHDANEPAGYRLECGAKSVAVATDLGKYDSYTVKNLQNLDA 162 >gi|167768076|ref|ZP_02440129.1| hypothetical protein CLOSS21_02621 [Clostridium sp. SS2/1] gi|317499367|ref|ZP_07957635.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167710405|gb|EDS20984.1| hypothetical protein CLOSS21_02621 [Clostridium sp. SS2/1] gi|316893336|gb|EFV15550.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 260 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 81/251 (32%), Gaps = 28/251 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + + +++DCGVS ++ L +DL P+ I ITH Sbjct: 12 GNCIYVG----TKKTNVLVDCGVSAKRIENSLSELDLTVPEF----------DGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P++A+ I + K S +A ++G + Sbjct: 58 HTDHIKGLGVIARRYGLPIFATGKTIDAIFDY-KNLGKVDKSLFHSIEADKPFEIGDMKV 116 Query: 137 ESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL- 194 + + H + + D D+ ++ + D D L N + L Sbjct: 117 NASHIWHDAADPVCYSFYSEEGAKASIATDLGDYDEYLVEKIYDSDILFVEANHDVNMLQ 176 Query: 195 ------MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT--TFSSSVSRIRSIIDI 246 REG +E+ + I ++ V + + ++ ++ Sbjct: 177 VGRYPYYLKRRILGREGHLSNER-CAELIEEVATQKTKKVYLGHLSKENNYEKLAYETVK 235 Query: 247 AEQIGRKIVLL 257 + + Sbjct: 236 ISLHNFTLPIE 246 >gi|30265480|ref|NP_847857.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47531048|ref|YP_022397.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49188299|ref|YP_031552.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49479014|ref|YP_039452.1| zinc-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145270|ref|YP_086727.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|65317443|ref|ZP_00390402.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Bacillus anthracis str. A2012] gi|118480490|ref|YP_897641.1| zinc-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|165872530|ref|ZP_02217163.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167636226|ref|ZP_02394529.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167641435|ref|ZP_02399685.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170689206|ref|ZP_02880403.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170708659|ref|ZP_02899098.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177651929|ref|ZP_02934512.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190568936|ref|ZP_03021838.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196036128|ref|ZP_03103528.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|196041941|ref|ZP_03109228.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196045464|ref|ZP_03112695.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|218906654|ref|YP_002454488.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225867443|ref|YP_002752821.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227818231|ref|YP_002818240.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229600134|ref|YP_002869671.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254687097|ref|ZP_05150955.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254724120|ref|ZP_05185905.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254735137|ref|ZP_05192847.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254742154|ref|ZP_05199841.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755936|ref|ZP_05207968.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254761648|ref|ZP_05213668.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|301056936|ref|YP_003795147.1| putative Zn-dependent hydrolase [Bacillus anthracis CI] gi|30260158|gb|AAP29343.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47506196|gb|AAT34872.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49182226|gb|AAT57602.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49330570|gb|AAT61216.1| possible Zn-dependent hydrolase, glyoxylase family [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978739|gb|AAU20289.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|118419715|gb|ABK88134.1| Zn-dependent hydrolase, glyoxylase family [Bacillus thuringiensis str. Al Hakam] gi|164711753|gb|EDR17297.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167510610|gb|EDR86006.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167528341|gb|EDR91112.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170126441|gb|EDS95329.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170666849|gb|EDT17615.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172082633|gb|EDT67697.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190560003|gb|EDV13986.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|195991295|gb|EDX55263.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|196023671|gb|EDX62347.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196027196|gb|EDX65816.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|218537280|gb|ACK89678.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225786478|gb|ACO26695.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227007798|gb|ACP17541.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229264542|gb|ACQ46179.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|300379105|gb|ADK08009.1| possible Zn-dependent hydrolase, glyoxylase family [Bacillus cereus biovar anthracis str. CI] Length = 264 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|297845690|ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata] Length = 422 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 113/371 (30%), Gaps = 20/371 (5%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-----RVYERVSKKIPCISFQ 124 A F+TH DH L WS P+Y S L ++ RV S Sbjct: 17 AYFLTHMQSDHTRGLSGGWSK--GPLYCSRITASLFPSRFPGFDLSLLRVVPLYSWTSLS 74 Query: 125 AGDKVDVGAFSIESVRV-NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + + H P +M + R G ++TGD++ D DA T Sbjct: 75 LRSPSSGSTVRLHFMAIDAHHCPGSMMFLFRGDFGCFLYTGDFRWDADASDEARTILVD- 133 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 AI + L D+T + S + + + DI+ + ++ S + + + Sbjct: 134 -AIHEFPVDILYLDNTYCNPIYSFPSRQVAAQLVADIIASHPSHDIIIAVDS-LGKEELL 191 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + ++ + KI + L+ + +G S PR + Sbjct: 192 LHVSRVLNIKIWVWPERLRTM----HLLGFQDVFTTDTSLTRVRAVPRYSFSIQTLEGLN 247 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + + G + D + S + + L V + Sbjct: 248 TMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNETISAQKELEAAAVHKFHDYM-Y 306 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQ----VLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 VH S H ++ + ++P+ ++V+ L + V +R Sbjct: 307 SVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFGRICGANQPPQVLLMRPD 366 Query: 420 KMLRLFPDPIE 430 I+ Sbjct: 367 IADEFQAVRIK 377 >gi|293606793|ref|ZP_06689144.1| metallo-beta-lactamase [Achromobacter piechaudii ATCC 43553] gi|292814797|gb|EFF73927.1| metallo-beta-lactamase [Achromobacter piechaudii ATCC 43553] Length = 460 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 74/462 (16%), Positives = 145/462 (31%), Gaps = 100/462 (21%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD-LVFPDIT 59 M L LG G + + + + + +++DCG+ GV L + Sbjct: 1 MSKN-LRLHFLGAAGTVTGS----RHLLDADGRLVLLDCGL------FQGVKPLRLRNWA 49 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPF-----------AIGLLEA 107 + A+ ++HAH DH G L L P+Y S + L EA Sbjct: 50 SFPVSPSRIEAVVLSHAHLDHSGYLPKLVREGFRGPIYCSEATLDLTRLLLLDSAHLQEA 109 Query: 108 ---KRVYERVSKKIP------------------CISFQAGDKVDVGAFSIESVRVNHSIP 146 +SK P I+F + G + R H I Sbjct: 110 DADYLNRHGISKHQPALPLYTVADAQRAIAALRPIAFDTPTDLPAG-LRFQLTRAGH-IL 167 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + P G +V +GD DD ++ E L+ +ST R+ Sbjct: 168 GAAIIELSYPGGKLVFSGDLGRYDDPLMPPP--------EHVEQADYLIVESTYGNRQHA 219 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + I G +++ +F+ V R + ++ ++ G Sbjct: 220 DEDVRDALSAIITRTVKRGGTLVIPSFA--VGRAQLLLFHLWRLK----QSGR------- 266 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 ++ D+ I + S L+ + A+ ++ +A+ + + + + Sbjct: 267 ISKDLPIYLDSPMASSAVDIYLHHLGDQRLSASDARAAYGAAVCVSDVEQSKALDASPMP 326 Query: 327 TVIFSSRAIPGNEVAIGHIK---------------NRLVEQGVRVIAEDAECPVH----- 366 VI S+ + + H+K + +G ++ +H Sbjct: 327 KVIVSASGMATGGRVLHHLKHYAKDPRNTVLFAGFQAMGTRGAAMLDGARTVKIHGEYVP 386 Query: 367 ----------VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 +S H +++ R + P+ +HGEP Sbjct: 387 VRAEVDNLAMLSAHADADEILRWLRGFTQAPRETFIVHGEPD 428 >gi|294778609|ref|ZP_06744031.1| metallo-beta-lactamase family protein [Bacteroides vulgatus PC510] gi|294447558|gb|EFG16136.1| metallo-beta-lactamase family protein [Bacteroides vulgatus PC510] Length = 267 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 19/164 (11%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + R I++D G+ G+ + + + Sbjct: 1 MKIKFISLASGSSG----NCYFLG----TDRYGILVDAGI--------GIRTIKKTLKEL 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + A+FITH H DH A+ L +PVY++P + Sbjct: 45 GIGLDIIRAVFITHDHADHIKAVGHLGEKFGIPVYSTPEVHAGINKSYCMTEKLSTCVHY 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ +++ F+I + V H + + + D Sbjct: 105 LHK-GETMELEDFAITAFEVPHDGTDNVGYCMNIDGKIFSFLTD 147 >gi|42784656|ref|NP_981903.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206975806|ref|ZP_03236717.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217962955|ref|YP_002341533.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|222098939|ref|YP_002532997.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|42740588|gb|AAS44511.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206745900|gb|EDZ57296.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217063510|gb|ACJ77760.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|221242998|gb|ACM15708.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|324329413|gb|ADY24673.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 264 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|75761476|ref|ZP_00741441.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206970448|ref|ZP_03231401.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218232694|ref|YP_002370237.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218900603|ref|YP_002449014.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|296505890|ref|YP_003667590.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|74491037|gb|EAO54288.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206735025|gb|EDZ52194.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218160651|gb|ACK60643.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218541502|gb|ACK93896.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|296326942|gb|ADH09870.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 264 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|146296847|ref|YP_001180618.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410423|gb|ABP67427.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 546 Score = 77.0 bits (188), Expect = 9e-12, Method: Composition-based stats. Identities = 77/526 (14%), Positives = 157/526 (29%), Gaps = 106/526 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 L LG + + + K +IDCG+ +D+L + Sbjct: 7 LKVTFLGAAQTVTGSCYYFE----CEGKKFLIDCGMFQGGHAEDEL--------NFEVFP 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------- 105 + + ++HAH DH G + L+ +Y + + L Sbjct: 55 FNPSEIDFMILSHAHIDHSGRIPKLYKDGFRGIIYTTDATVDLCSIMLPDSAHIQESDVE 114 Query: 106 ----EAKRVYERVSKKIPCISFQAGDKVDVGAFSIE-----------SVRVNHSIPETMA 150 + KR K + I E ++ + + Sbjct: 115 WKNKKRKREGREELKPLYTIDDAYACLDLFSGVKYEEVIEIDSNLRFVLKDAGHMLGSAI 174 Query: 151 LVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + +V +GD + IL D + +G L +ST R Sbjct: 175 VELYITENEKEYKLVFSGDLGNRNVPILKDPSTI--------DGCDYLFIESTYGDRLHE 226 Query: 207 CISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + K K + I+ + G V++ +F+ V R + I+ + ++ GS + Sbjct: 227 DVENKS--KRLIRIICDTISNGGKVIIPSFA--VGRTQEILYEIAK----VLTTGSDEAK 278 Query: 264 VVSVAIDV--GIIKKDQLFLSDESFGLYPREQLIVIATGSQG-EPRSALAQLSRGEMRNV 320 ++ + + + + E I G EP++ + E + + Sbjct: 279 LIQSVEIFVDSPLATSASGVYKKHIDYFDEEAAEFIKKGIYPLEPKNLKFVRTADESKML 338 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA---------------------- 358 E +I SS + H+K+ L ++ ++ Sbjct: 339 NDYEGSCIIISSSGMCEAGRIKHHLKHNLWKKNNTILFVGYQAPNTLGRKLLDGQKKVKI 398 Query: 359 --------EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQE 408 E SGH N L + + +PQ + +HGE V + + Sbjct: 399 FGEEIEVKAKIEYIEAYSGHADKNGLIKWIDSMKNKPQQVFIVHGEKESQVEFAQELKRN 458 Query: 409 GIACVPPVRNGKMLRLFPDPIEIIDEVV-HGLFLKDGFLIGKFADL 453 V G+ + P+ I D + + ++ + D+ Sbjct: 459 FDFDVHIPARGEFYVIGPEQIVTKDRLFSESPSFVNLSILAQIEDI 504 >gi|212695921|ref|ZP_03304049.1| hypothetical protein ANHYDRO_00454 [Anaerococcus hydrogenalis DSM 7454] gi|212677044|gb|EEB36651.1| hypothetical protein ANHYDRO_00454 [Anaerococcus hydrogenalis DSM 7454] Length = 274 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 17/152 (11%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 I+IDCG S K + ++ I ++ +L AIF+TH H DH + Sbjct: 29 VEHKGSKILIDCGFSGRKIENL--------LSQIDEKPSDLDAIFLTHEHMDHVKGAGVI 80 Query: 88 WSFLHVPVYASPFA-IGLLEA--KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +P+YA+ + ++ K E + F++ ++ +F I + ++H Sbjct: 81 SRRYDIPIYANKGTWLSFIKNAGKLKEENI------KIFRSNSFLNFNSFDIFPISIHHD 134 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 E + ++ I D + DD IL + Sbjct: 135 ANEPVGFILYLDNKKITVLTDTGIIDDRILNE 166 >gi|326943260|gb|AEA19156.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 264 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDLKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|313500058|gb|ADR61424.1| Beta-lactamase domain protein [Pseudomonas putida BIRD-1] Length = 480 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 119/388 (30%), Gaps = 40/388 (10%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + G +S +++DCG+ D PG + + + + + A+ Sbjct: 13 GGTRGVTGSCHQLHLGPSTS---LLVDCGLEQGSDAPPGAES-----APLGFDIQGIQAL 64 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVS--KKIPCISFQAGDK 128 ITH H DH G + L + P+ S + LL P + + Sbjct: 65 VITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLSISSEPAQVARYLEF 124 Query: 129 VD--VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVTDKDSLC 184 + + E P + G+++ + + D + L Sbjct: 125 IRDLIVPLPFEQWHTVVECPGLACRIRLQRAGHLLGSAYVECDMQHEQTNSRYVFSGDLG 184 Query: 185 AIGN---------EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTT 232 A GN E L+ +ST R ++ ++ + D + A KG +L+ Sbjct: 185 ASGNPLLRPVQPPERADVLVLESTYGDRLHPQADDR--RQRLEDAIDRALADKGTLLIPA 242 Query: 233 FSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 FS + R + ++ E G S+ I + + + E Sbjct: 243 FS--LGRTQELLYELEDILHRKALLNTTGPAPDGESIDWSQLPIILDSPLAQRITSVYRE 300 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIG 343 + E +A G S L + + + + I GN + + G Sbjct: 301 LHEYWNAEARARVAAGRDPLGFSQLISVDTHARHQQVVNYLKSTGRPAIVIAGNGMCSGG 360 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHP 371 I N L E G P Sbjct: 361 RIVNYLKAMLGDPRHEVMFVGYQAKGTP 388 >gi|261865341|gb|ACY01922.1| hypothetical protein [Beta vulgaris] Length = 551 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 103/332 (31%), Gaps = 38/332 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+THAH+DH + S+ P+Y++ L+ Y + + + G + V Sbjct: 27 FLTHAHKDHCSNI---TSYFSFPIYSTLLTKSLI---LCYFPQLDESLFVQIEVGQSIIV 80 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD-DAILGDVTDKDSLCAI 186 GAF++ + NH P + + GNI+HTGD +L Sbjct: 81 DDPDGAFTVTAFDANH-CPGAVMFLFEGEFGNILHTGDCRLTPECLQNLPEKYIARKGKE 139 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + + + D T S++ + + + V + ++ Sbjct: 140 PSSQLDFVFLDCTFGKSLMDIPSKQSALQQVIN----------CIWKHPDVPTVYLTCNM 189 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 Q + V I + Q+I S+ Sbjct: 190 LGQEEVLVK---------VFQTFGSKIYVDKAKHPDFYQAMGFIAPQIISEDPSSRFHLF 240 Query: 307 SALAQLSRGEMRNV-----KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 +L + + + + +I S E + R + + + +D Sbjct: 241 EGFPKLYEKAKKKISEARENMQPEPLIIRPSAQWYAREETELTVMERKILERSNIPVKDQ 300 Query: 362 ECPVHV--SGHPYPNDLKRMYQWIRPQVLVAI 391 HV S H +L+ + + P+ +V+ Sbjct: 301 FGVWHVCYSMHSSRQELEWAMELLSPKWVVST 332 >gi|22298698|ref|NP_681945.1| hypothetical protein tll1155 [Thermosynechococcus elongatus BP-1] gi|22294878|dbj|BAC08707.1| tll1155 [Thermosynechococcus elongatus BP-1] Length = 540 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 79/479 (16%), Positives = 154/479 (32%), Gaps = 60/479 (12%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 G I++DCGV P +D V P + I + +L + +HAH DH + Sbjct: 16 VCIGLGIGTYRILLDCGV-------PSLD-VLP-LDEIEQHPFDL--VLCSHAHADHARS 64 Query: 84 LHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA-FSIESVRV 141 L L H+P+YAS LL E V C + V+ G + E Sbjct: 65 LLALHRRFPHIPIYASEVTTQLLPLNWPDETVPP--FCRALPWRSPVEFGDGLTAELFPA 122 Query: 142 NHSIPETMALVIRSPVGN-------IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 H +P V+ N +++TGD+ L T+ +L + L Sbjct: 123 GH-LPGAAVFVLTYQDANPEQPPLSVIYTGDFFLSHT----RFTEGLALADLRGLQPDVL 177 Query: 195 MCDS--TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + + A E + + + + +L + I+ + Sbjct: 178 IIEGSLGTARHPHRRQQENQLAERMRTAIDQGYNLLLPLPPL---GTAQEILILLRSHHL 234 Query: 253 KIV-----LLGSSLKR----VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ- 302 +G ++ R ++V + ++ + + Q+ ++ +Q Sbjct: 235 FTGRPIQIWVGPAIARGCDAYLTVLSHLPTAIQNFAHHQSLFWDQRVKPQVQPLSNWAQI 294 Query: 303 --GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 P L + + + + ++ R G ++ E G E Sbjct: 295 QGEVPTIVLVEEDQDLRPYLTEGGRPWLVLYPRLRYG-----QPVREGYPEFGDLPNVEV 349 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + S H ++ IRPQ +V IHG+P +L L + +G Sbjct: 350 DTFLL--SLHADGPATTQLIHNIRPQHVVLIHGDPNYLADLASLNELSNRYHLHTPTSGS 407 Query: 421 MLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA--------KR-RQLSFVGHLSVN 470 ++ + + +G + ++ I R R+L+ G + + Sbjct: 408 TIQFPIGQLTLSTPSSLVQLAYEGEVSEWNDEVMIRLPPSITTDSRWRRLADTGFVLAS 466 >gi|323463225|gb|ADX75378.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 263 Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 17/215 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + +++D G++ K + I ++ +L I +TH H DH L L Sbjct: 18 VESDKGSLLVDVGLTGKKMEAL--------FEQIDRKISDLSGILVTHEHSDHIKGLGVL 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVYA+ ++ K + +K F + + F IES V+H + Sbjct: 70 ARKYGLPVYANEKTWTCIDKKDSKIPLDQK---FVFNPHETKSIAGFDIESFNVSHDAID 126 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 + + D + + + +D + + +L + Sbjct: 127 PQFYIFHNNYKKFTMITDTGYVSERMKGMIRGSDAFMFESNHDVDMLRMCRYPWKTKQRI 186 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + ++ S Sbjct: 187 LSDMGHVSNEDAAHAMKDVITGQTKRIYLSHLSQD 221 >gi|306833965|ref|ZP_07467089.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus bovis ATCC 700338] gi|304423966|gb|EFM27108.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus bovis ATCC 700338] Length = 269 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 18/241 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K +ID G++ K + I ++ ++L AIFITH H DH + Sbjct: 19 SFYVETPQKRFLIDAGLTGKKITSLLAE--------IDRKPEDLDAIFITHEHSDHIKGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++ VYA+ +++ + F+ G + +G IES V+H Sbjct: 71 GVLARRYNLDVYANEKTWQMIDER-NMIGKLDFAQKHIFERGKTLTLGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC-----AIGNEGILALMCD 197 E + + V D + D A + + D + I G Sbjct: 130 AVEPQFYRLMKDNKSFVILTDTGYVSDRMAGIIENADGYLIESNHDVEILRSGAYPWSLK 189 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 +G +E G I I K L + I+ + + + Sbjct: 190 QRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKEN--NIKELAHMTMENNLIQADF 247 Query: 258 G 258 G Sbjct: 248 G 248 >gi|213409816|ref|XP_002175678.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275] gi|212003725|gb|EEB09385.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275] Length = 771 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 48/429 (11%), Positives = 119/429 (27%), Gaps = 54/429 (12%) Query: 37 IDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVP 94 +D G+ P + + + ITH H DH AL + Sbjct: 17 LDAGIHPAYSGF----AALPFFD--EFDLSTVDILLITHFHLDHAAALPYVMQKTNFRGR 70 Query: 95 VYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGAFSIE 137 V+ + + + + + ++V Sbjct: 71 VFMTHPTKAVCKWLLSDYVRVSNVGVEDQLYDEKDLAAAFERMEAVDYHSTIEVEGVKFT 130 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 H + I +++TGD+ ++D L + + + L+ + Sbjct: 131 PFHAGH-VLGACMYFIEIAGVKLLYTGDFSREEDRHLN-------IAEVPPQKPNILISE 182 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------- 250 ST +K + + + + V ++ R + ++ I ++ Sbjct: 183 STYGTASHQPRLDKEAR-LLNLVHTTVRNGGRVLMPVFALGRAQELLLILDEYWHSHAEL 241 Query: 251 GRKIVLLGSSLKRVVSVAIDVGI-IKKDQLFLSDESFGLYPREQLIVIATGSQGE----- 304 + SSL R I + D++ + + + + + + + Sbjct: 242 RSVPIYYASSLARKCMAVYQTYINMMNDKIRKAFAERNPFIFRYIKSLRSIDKFDDIGPS 301 Query: 305 -PRSALAQLSRGEMR----NVKLAEKDTVIFSSRAIPG-NEVAIGHI-KNRLVEQGVRVI 357 ++ L G R ++T++ + ++ G I + G ++ Sbjct: 302 VILASPGMLQNGVSRTLLERWAPDARNTLLLTGYSVEGTMAKLIANEPIEITTLSGQKIP 361 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 + + H + P ++ +HGE + K + + V+ Sbjct: 362 RRMTVEELSFAAHVDYIQNSEFIDAVNPDHIILVHGEQTNTGRLKSALMSKYHNKKMDVK 421 Query: 418 NGKMLRLFP 426 P Sbjct: 422 VYNPKNCVP 430 >gi|192361468|ref|YP_001983287.1| metallo-beta-lactamase superfamily domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687633|gb|ACE85311.1| metallo-beta-lactamase superfamily domain protein [Cellvibrio japonicus Ueda107] Length = 256 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 58/177 (32%), Gaps = 21/177 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LG G G N L +G ++IDCG S + + + Sbjct: 6 RFASLG-SGSRG-NATLVNWGQGH----VLIDCGFSVREAEQ--------RLARFELSPG 51 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 NL AI +TH H DH + L +PVY +P + + ++ Sbjct: 52 NLDAILVTHEHADHIKGVAALARRYQLPVYMTPGTY-------HSRSLGELPDLRLIESY 104 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++G ++ V V H E V + D + D D++ Sbjct: 105 TPFNIGNLWVQPVAVPHDAREPTQFVFEYAGRRLGILTDLGSITPHVEACYQDLDAM 161 >gi|150392428|ref|YP_001322477.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149952290|gb|ABR50818.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 264 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 93/274 (33%), Gaps = 32/274 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L G +++D G+ ++ D I K+L I ++H H Sbjct: 14 GNCHLISDGKEH----LLVDAGL-----SGKQIESRLKD---IGMNPKDLTGILVSHEHR 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L ++PVYA+ + K K+ F +G ++ Sbjct: 62 DHILGVGILSRRYNLPVYANEGTWKGMADKV---GKVKEEHICFFDQTRDFKIGKLTVSP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 ++H + + + I D D++ L +GN ++ L + Sbjct: 119 FSISHDAKDPVGFCFQGSNAKISIATDLG---------HIDEEILNKVGNSDLVVLESNH 169 Query: 199 -TNAMREGTCIS--EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 ++ G ++ + ++ + +A G +V +V I + ++++ + Sbjct: 170 DVEMLKIGQYPYALKRRVLSDVGHLSNDAAGDAIVDLVKRNVKAI-LLAHLSKENNFPEL 228 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 ++ V ++ +I + +S Sbjct: 229 ----AMITVKNILQSNEMIIGRDIEVSLAERNRV 258 >gi|307244737|ref|ZP_07526839.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] gi|306491914|gb|EFM63965.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] Length = 266 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 16/144 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N GY I+ID G+S K G++ + DI+ L IF Sbjct: 8 GSGSSG-NCHYVGY----KDTNILIDAGLS-GKRISKGLENIDVDIS-------KLRGIF 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH L L +P+Y + LE+K K+ + F D+G Sbjct: 55 VTHEHSDHIKGLGVLSRKYDLPIYLNYKTWLALESKI---GKIKESNVMIFDNDKAYDLG 111 Query: 133 AFSIESVRVNHSIPETMALVIRSP 156 I+ +NH + + + + Sbjct: 112 DMCIKPFSINHDAADPVGFSLFNE 135 >gi|291539654|emb|CBL12765.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Roseburia intestinalis XB6B4] Length = 265 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 17/182 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S ++ID G+S ++ L +DL + + + + +TH Sbjct: 12 GNCICVG----SDENHVLIDAGISGKRIENGLNSIDL----------KTEEMQGVLVTHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+YA+ I + ++ + ++G I Sbjct: 58 HIDHISGLGVIARRYGLPIYATQGTIDAILNT-KSVGKIEESLFHAITPDQPFEIGDLLI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 E + ++H + +A I++ D D+ ++ + + D L N + L Sbjct: 117 EPISISHDAADPVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEANHDVHMLQV 176 Query: 197 DS 198 S Sbjct: 177 GS 178 >gi|168207696|ref|ZP_02633701.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|168214936|ref|ZP_02640561.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170660992|gb|EDT13675.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|170713632|gb|EDT25814.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 263 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 40/251 (15%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSEKTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST----- 199 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKYKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 200 ----------NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-----RSII 244 + E +S + K I DIMK+ K ++ S+ + + +++I Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELAEQAVI 233 Query: 245 DIAEQIGRKIV 255 ++ I Sbjct: 234 NVLNAHKINIG 244 >gi|47568661|ref|ZP_00239358.1| metallo-beta-lactamase family protein YycJ [Bacillus cereus G9241] gi|47554649|gb|EAL13003.1| metallo-beta-lactamase family protein YycJ [Bacillus cereus G9241] Length = 264 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 NM G + K +++D G+S + ++ I +TH H Sbjct: 14 GNMLYVG----TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVYA+ +E F GD G +ES Sbjct: 62 DHIKGLGVLARKYDLPVYANEKTWSAMEHLI---GNIPTEQKFIFSIGDVKTFGDIEVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H E M + + D Sbjct: 119 FGVSHDAAEPMFYAFHNNNRKLALITDTGY 148 >gi|332654661|ref|ZP_08420404.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] gi|332516625|gb|EGJ46231.1| metallo-beta-lactamase family protein [Ruminococcaceae bacterium D16] Length = 532 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 82/280 (29%), Gaps = 55/280 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F G + + G K I+IDCG+ +D+ D + Sbjct: 1 MKLSFF--GAAHAVTGSCHCLEVG----GKKILIDCGLQQGRDEH--------DDNALDF 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + +THAH DH G + L ++ + LL ++ Sbjct: 47 SPSYIDYVIVTHAHIDHSGRIPLLVKEGFQGQIFTTRLTGELLSIMLRDSAFIQESDAQW 106 Query: 123 FQAGDKVDVGA------------------FSIESVRV-------------NHSIPETMAL 151 K F++E + + + + Sbjct: 107 QNQKGKRAGRPEVEPLYTVADAEAALEQIFTVEYGQTLDLCEGVKIRFRDAGHLLGSSIV 166 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 I + G++ + D + + D + L ++ +ST R+ Sbjct: 167 EIWAKEGDVERKLVFSGDLGNVDQPIIRDPEFLEE-----ADYVVMESTYGDRDHEVPES 221 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + D G V++ +F+ V R + ++ + Sbjct: 222 YTEALAQLIDDTFAQGGNVVIPSFA--VGRTQELLYFLRE 259 >gi|149204512|ref|ZP_01881478.1| metallo-beta-lactamase family protein [Roseovarius sp. TM1035] gi|149142011|gb|EDM30060.1| metallo-beta-lactamase family protein [Roseovarius sp. TM1035] Length = 460 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 81/278 (29%), Gaps = 56/278 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F LG G + + L + I++DCG+ F P Sbjct: 8 KLRF--LGAAGTVTGSRYLVEAL----GRRILVDCGL-FQGFKQLRARNRKPFP----VR 56 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EAKRV 110 + + +THAH DH G L L V + L EA+ Sbjct: 57 VNTIDTVLLTHAHLDHSGYLPTLIRAGFRGRVLCTEATADLCGLILPDSGHIQEEEARFA 116 Query: 111 YERVSKKIPCISFQAG--------DKVDVGAFSI----------ESVRVNHSIPETMALV 152 R K D+ D+ F + H + + Sbjct: 117 ARRGYSKHKKPKPLYTLKDAKAALDRFDLQPFDRRIDLGDGIAARFIPAGH-LLGAAQIR 175 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC-ISEK 211 + + +GD D D ++ G L+C+ST R E Sbjct: 176 LEVGGRVVHFSGDLGHDPDPLMRPP--------QPFGGADVLVCESTYGNRSHPDVDPEA 227 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G VL+ +F+ V R + ++ + Sbjct: 228 ELAPILKRTFARG-GTVLIPSFA--VGRAQGLMLHIAR 262 >gi|302871255|ref|YP_003839891.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574114|gb|ADL41905.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 265 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 24/196 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++L+F PL G G N L Y I++D GVSF + + Sbjct: 2 SDKLIFCPLYSGSSG----NSILISY----KDTTIIVDAGVSF--------KKLVQALEK 45 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + + AI ++H H DH + L+VP+ + ++ + Sbjct: 46 IGFNK-KIDAILLSHDHSDHVKCAGIYFRKLNVPIITNHKTWESIKRFL---GKVDESYV 101 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVT 178 + G VG+ +++ + H + M + D D A + D + Sbjct: 102 KLIETGTSFSVGSIGVDTFSIPHDASDPMGFCFYVKNKKVSICTDVGHVNDSVATMIDFS 161 Query: 179 DKDSLCAIGNEGILAL 194 D L + + +L Sbjct: 162 DIILLESNHDVEMLMF 177 >gi|219121698|ref|XP_002181198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407184|gb|EEC47121.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 503 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 108/353 (30%), Gaps = 37/353 (10%) Query: 60 FIMK--ERKNLMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVS 115 ++ K N+ ++H H DHYG+L P ++ +P LL Sbjct: 25 YLQKTRNPDNV--FILSHWHGDHYGSLPR-DGKYQGPSLIHCTPTTAALLR----EIHQV 77 Query: 116 KKIPCISFQAGDKVDVGA---------FSIESVRVNHSIPETMALVIRSPVGNI-VHTGD 165 + + G+ I NH P +V+ G + +HTGD Sbjct: 78 PEKYVVEHGYGETWLFHPLGNTKGLSTVQITFYDANH-CPGAAIIVVEMADGKVHLHTGD 136 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TCISEKGI------KKNIY 218 + + + + + I ++ D+T + + E I + + Sbjct: 137 MRY-HTMMNVYPI-LERAAS--SRAIDTVLLDTTYSDPKHNFQPQEAAIDAIAAYSEGLL 192 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + VL+ S+ + + + +++ + + + + + R++ + Sbjct: 193 GTSRKCCSNVLILLSCYSIGKEKVLWEVSSRTNQLVYVNDRKM-RMMRCIQKH---HESS 248 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + + VI G GE K E + + G Sbjct: 249 SQIVQRCTTDPNATDIHVIPMGLAGELWPYFQPNYWACAEYAKALETEYTKVVAFIPTGW 308 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 K + E + S H ++LK +++RP+ +V Sbjct: 309 ADGSKWNKKNATSKFDCKGIEVEIRLISYSEHSSFSELKTFVEFLRPRKVVPT 361 >gi|323694973|ref|ZP_08109122.1| hypothetical protein HMPREF9475_03986 [Clostridium symbiosum WAL-14673] gi|323500966|gb|EGB16879.1| hypothetical protein HMPREF9475_03986 [Clostridium symbiosum WAL-14673] Length = 372 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 18/211 (8%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG GE G + + YG + + ++DCG+ D P P +E + Sbjct: 8 GGYGEHGRSCFMVEYG--TEGRCYIVDCGIM---DTDP-----VPWPAVTPEELAQADFL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAI---GLLEAKRVYERVSKKIPCISFQAGD 127 F+TH H+DH GA + S + G+ K + ++ ++ Sbjct: 58 FLTHCHKDHAGAFGYFAEQGFRGWLVTSQVTLRLSGIAYNKILILDETEDNREGEGKSLA 117 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + + R H P + +I+ +G +GD++ D + + D Sbjct: 118 DIGYKTVRVNYGRSGH-CPGGLWFLIKDELGACFFSGDYQED---TVFYLCDPVRNREAQ 173 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I + ++ + +++ + Sbjct: 174 LAIIDCAHESTGLGAKKLRQALIRRVREKLE 204 >gi|323487716|ref|ZP_08092974.1| YycJ [Planococcus donghaensis MPA1U2] gi|323398450|gb|EGA91238.1| YycJ [Planococcus donghaensis MPA1U2] Length = 262 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 21/224 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G ++D G+S K + I K+ +L I +TH H Sbjct: 12 GNATYIENG----EHSFLVDAGLSGRKMEEL--------FAAIGKKMSDLDGILVTHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L + VP+YA+ ++ F G+ IES Sbjct: 60 DHIKGLGIVARKHKVPIYANAKTWSAMDGLI---GAVPVEQRFHFDMDTVKTFGSMDIES 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL-- 194 V+H + M V + + D + D + +D + + G+L + Sbjct: 117 FAVSHDAADPMFYVFHADGRKLSLITDTGYVSDRMKGVIQASDSYVFESNHDVGMLQMGR 176 Query: 195 --MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +++ + ++ S Sbjct: 177 YPWSIKRRILSDVGHVSNEDAAVAMSEVIAEKPTRIYLSHLSKD 220 >gi|68076685|ref|XP_680262.1| cleavage and polyadenylation specifity factor protein, [Plasmodium berghei strain ANKA] gi|56501171|emb|CAH99756.1| cleavage and polyadenylation specifity factor protein, putative [Plasmodium berghei] Length = 888 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 14/106 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGG E+G + + S + IM+DCG+ P + + Sbjct: 1 MSN--INIVCLGGASEVGRSCVIIE----SEKTSIMLDCGI------HPAFMGIGCLPIY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL 104 + + ITH H DH GAL L + V+ + G+ Sbjct: 49 DAYDISKIDVCLITHFHMDHSGALPYLINKTRFKGRVFMTEATKGI 94 >gi|226322347|ref|ZP_03797865.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] gi|225209269|gb|EEG91623.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] Length = 249 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + K L I ITH H DH L +P+Y +P I + + Sbjct: 26 LEIKGKELDGILITHEHADHIQGLGVFSRKYEIPIYGTPGTIRGIRDY-KNLGKMPEGLY 84 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 Q + +G + ++H E I D D+ + ++ D Sbjct: 85 HEIQVDKEFKLGDIDVHPFAISHDANEPSGYRFEQDGKKIAVATDLGKYDEYTVENLKDL 144 Query: 181 DS 182 ++ Sbjct: 145 NA 146 >gi|319956149|ref|YP_004167412.1| metallo-beta-lactamase family protein [Nitratifractor salsuginis DSM 16511] gi|319418553|gb|ADV45663.1| metallo-beta-lactamase family protein [Nitratifractor salsuginis DSM 16511] Length = 201 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 22/149 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L G + ++ID GV ++++E KN +AI TH H D Sbjct: 14 NCYLVETGGKT----LIIDPGVG--------------ATEWVLREAKNPVAILNTHGHFD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +L L +P+Y +LE + P + +++G + Sbjct: 56 HVWSNAELQEHLKIPLYVPEADAFMLERDPFGQGTPPSRPDVKVAPDSTLEIGGIPVTFR 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKL 168 P L I +GD+ Sbjct: 116 HFPGHTPGCSVLEIGE----CWFSGDFLF 140 >gi|291525360|emb|CBK90947.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale DSM 17629] Length = 267 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 17/167 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + ++ID G+S ++ L D+ D+ I +TH Sbjct: 13 GNCICVG----TDDCHVLIDAGISGKKIENGLNEFDMTATDMH----------GILVTHE 58 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + H+P+YA+ IG ++ +AG +G Sbjct: 59 HIDHIAGLGVMARRYHMPIYATKATIGAIKCT-KSVGNIDDELFHPIEAGVDFTIGDIEF 117 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 E + ++H + +A ++ + D DDA++ + + D L Sbjct: 118 EPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGL 164 >gi|291563228|emb|CBL42044.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [butyrate-producing bacterium SS3/4] Length = 533 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 67/477 (14%), Positives = 141/477 (29%), Gaps = 103/477 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + + ++ K I++D G+ + +L P Sbjct: 1 MKLTFI--GADHEVTGSC----HYLNAAGKNILVDYGMEQGGNVYENAELPIPF------ 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 ++ IFITHAH DH G L +++ ++A+ L +++ Sbjct: 49 --SDVDYIFITHAHIDHTGLLPLIYAKGFKGQIFATQATCDLCNIMLKDSAHIQEMEAEW 106 Query: 119 ---------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPETMA 150 + GD + + + V H + + + Sbjct: 107 KNRKARRAGNPEVQALYTVNDAEGVLKHFVPCHYGDILTICDGLKVRFTDVGH-LLGSAS 165 Query: 151 LVIRSP----VGNIVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + IV +GD + + TD+ ++ + T R Sbjct: 166 IEVWIDEDGVQKKIVFSGDIGNKNKPLIKDPQYTDEA----------DYVVMECTYGDRS 215 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS-LKR 263 E I++ I + V + +V R + I+ +I + ++ G Sbjct: 216 HDRTHEH-IEEFAKIIQRTLDRHGNVVIPAFAVGRTQEILYFIRKIKEEGLVTGHDGFPV 274 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKL 322 V + V +S+ + E + ++ G L +S + + + Sbjct: 275 YVDSPLAVEATHVFNKNISEC----FDEEAMDLVNRGINPIAFPGLNLSVSSDDSKAINF 330 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC------------------- 363 + VI S+ + H+K+ L Q ++ + Sbjct: 331 DSEPKVIISAAGMCDAGRIRHHLKHNLWRQECTIVFAGYQAVGTLGRSLIEGAEVVKLFG 390 Query: 364 -----------PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 +SGH L +P + +HG+ L L Sbjct: 391 ETIDVEAEIVCLDGLSGHADREGLLTWINAFKKKPDRVFMVHGDDLVCTKFANLLRS 447 >gi|153814486|ref|ZP_01967154.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|317500529|ref|ZP_07958751.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331089372|ref|ZP_08338272.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847980|gb|EDK24898.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|316898039|gb|EFV20088.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330405435|gb|EGG84970.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] Length = 265 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 13/164 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+S + + + + ++L I ITH H Sbjct: 12 GNCIYVG----SDDTHLLVDTGIS--------KKRIEEGLKTLELKGEDLDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+P I +++ + +A + ++G +++ Sbjct: 60 DHIQGLGVFSRKYEIPIYATPGTIMGIKSY-SGLGKMPEGLYREIRADEPFELGDMTVKP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++H E + ++ D D + + + D+ Sbjct: 119 FAISHDANEPSGYRLEQGGKSVAVATDLGKYDSYTVECLRNLDA 162 >gi|70945220|ref|XP_742453.1| cleavage and polyadenylation specifity factor protein, [Plasmodium chabaudi chabaudi] gi|56521446|emb|CAH74696.1| cleavage and polyadenylation specifity factor protein, putative [Plasmodium chabaudi chabaudi] Length = 564 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 14/106 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGG E+G + + S + IM+DCG+ G+ P Sbjct: 1 MSN--INIVCLGGASEVGRSCVIIE----SEKTSIMLDCGI---HPAFMGI-GCLPIYD- 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL 104 + + ITH H DH GAL L + V+ + + Sbjct: 50 -AYDISKVDVCLITHFHMDHSGALPYLINKTRFKGRVFMTEATKSI 94 >gi|126701278|ref|YP_001090175.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile 630] gi|254977311|ref|ZP_05273783.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-66c26] gi|255094642|ref|ZP_05324120.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CIP 107932] gi|255102868|ref|ZP_05331845.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-63q42] gi|255308688|ref|ZP_05352859.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile ATCC 43255] gi|255316395|ref|ZP_05357978.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-76w55] gi|255519054|ref|ZP_05386730.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-97b34] gi|255652238|ref|ZP_05399140.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-37x79] gi|260685192|ref|YP_003216477.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260688851|ref|YP_003219985.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile R20291] gi|306521955|ref|ZP_07408302.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-32g58] gi|115252715|emb|CAJ70559.1| putative metallo-beta-lactamase-like hydrolase [Clostridium difficile] gi|260211355|emb|CBA66985.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260214868|emb|CBE07656.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile R20291] Length = 265 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 16/144 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N GY + + I++D G+S K G+ + D L IF Sbjct: 8 GSGSSG-NCHYIGYKNTN----ILVDAGLS-GKRITTGLKDIGVD-------ADKLKGIF 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH L +PV+A+ ++ K K F+ +G Sbjct: 55 ITHEHVDHIKGAGILSRKFDIPVFANIKTWCSMKDKL---GDIKDKNMKVFENDKTYSLG 111 Query: 133 AFSIESVRVNHSIPETMALVIRSP 156 + + H + + + Sbjct: 112 DIIVRPFSIEHDASDPVGYNFYTE 135 >gi|168209849|ref|ZP_02635474.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|168217375|ref|ZP_02643000.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|169342273|ref|ZP_02863353.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169299654|gb|EDS81712.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|170712072|gb|EDT24254.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|182380566|gb|EDT78045.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 263 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 40/251 (15%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSEKTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST----- 199 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKHKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 200 ----------NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-----RSII 244 + E +S + K I DIMK+ K ++ S+ + + +++I Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELAEQAVI 233 Query: 245 DIAEQIGRKIV 255 ++ I Sbjct: 234 NVLNAHKINIG 244 >gi|194333560|ref|YP_002015420.1| beta-lactamase domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311378|gb|ACF45773.1| beta-lactamase domain protein [Prosthecochloris aestuarii DSM 271] Length = 465 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 74/486 (15%), Positives = 140/486 (28%), Gaps = 85/486 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFI 61 EL F G G I + + + I++DCG+ +++ + D Sbjct: 1 MELEFY--GATGRITGSCHILRSSGYT----ILVDCGLIQGSAEEEALNREPFPFDPRA- 53 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERV 114 + A+ +TH H DH G L L PV+ L A+ + Sbjct: 54 ------IDAVVLTHGHIDHSGRLPLLVKEGFRGPVFTQQATRDLSLVLLQDSARLGEQDA 107 Query: 115 SKKIPCISFQAGDKVD--------------------------VGAFSIESVRVNHSIPET 148 K + + D ++ + +I H I + Sbjct: 108 RYKNRQRAKKKLDPIEPLYRVEDAIEAVNSMVPLPYEAEKEILPGITITFHDAGH-ILGS 166 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + + + D + + +L A++ +ST R Sbjct: 167 AIVAFMLNENGVRRRLVFSGDLGQYDTPILNDPALIEHA----DAVVIESTYGDRLHRER 222 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-------KIVLLGS 259 E + I + + D G +L+ F+ + R + ++ + + R +I L Sbjct: 223 DETLQEIGRILQDAWDEG-GNILIPAFA--IGRSQELLYLFAKYAREWELDRWQIFLDSP 279 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE----------PRSAL 309 ++ D + ++ L + G R Q + ++ A Sbjct: 280 MAIEASAIYWDHPELYDEEARLFRSNIGSMARPQNLHFTRSAEESRTINDIGKGAIIIAG 339 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNE---VAIGHIKNRLVEQGVRVIAEDAECPVH 366 + + G L I G + + N + VH Sbjct: 340 SGMCNGGRILYHLKHNLGCSACHIMITGYQAEGTPGRRLVNGEETMRIHGSEYRVAARVH 399 Query: 367 V----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 S H DL R + P+ V +HGE V E + + V G+ Sbjct: 400 TLGGLSAHGDQRDLLRWAGGFKSRPRFFV-VHGEDEPKVVLAEKLRELKGSDVIIPGPGE 458 Query: 421 MLRLFP 426 + L P Sbjct: 459 IFDLAP 464 >gi|313885575|ref|ZP_07819325.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619305|gb|EFR30744.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 283 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 19/162 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + +M+D G+S + + I + Sbjct: 25 SILASGSSG----NCTYIESATTH----LMVDAGLSGKRIEGL--------FQQIDRSLA 68 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + AI +TH H+DH + L ++P+YA+ ++ + Sbjct: 69 QVDAILVTHEHKDHIHGVGVLSRKYNLPIYANRKTWSVMANMI---GKIAPENIKYIENE 125 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + +G + + V+H + + V D Sbjct: 126 EMITIGDIDVLTYNVSHDAIQPQFYAFQRSKKQFVMLTDTGY 167 >gi|154250807|ref|YP_001411631.1| beta-lactamase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154154757|gb|ABS61974.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 472 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 134/443 (30%), Gaps = 78/443 (17%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 LGG G + + + I+IDCG+ F P F + R + Sbjct: 25 TSLGGAGTVTGS----KHLLTLDGHRILIDCGL-FQGLKNLRELNWAP---FPVDPRS-I 75 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA---IGLL----------------EAK 108 AI +THAH DH G L + V+A+ L+ Sbjct: 76 DAIVLTHAHLDHSGYLPKIVREGFRGRVFATDTTCNVAALILKDSGYIQEKDADYANRKS 135 Query: 109 RVYERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALVIRSP 156 + + + + G ++ H I I Sbjct: 136 YSKHKPALPLYGVRDAERAVEAFTAVPYHKTVSLPGGATLTFRHAGH-ILGAATAEIGWG 194 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 I+ +GD D ++ D +++ ++ +ST R Sbjct: 195 GKKILFSGDLGRYGDPVMV---DPETVS-----KADYVVVESTYGNRSHDTADPVEQLGA 246 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-----RKIVLLGSSLKRVVSVAIDV 271 + + G V++ F+ V R +S++ + R + + S + A ++ Sbjct: 247 VIEKTVARGGTVVIPAFA--VGRAQSLLYYIWALKQAGRIRDVPVYLDS--PMAINASEL 302 Query: 272 GIIKKDQLFLSDESFGLY--------PREQLIVIATGSQGEPRSALAQLSRG----EMRN 319 D LS E I + + + + ++ G Sbjct: 303 LCAHLDDHRLSPPLCKQVCDIATYVREVEDSKEITANAHPKIIISASGMATGGRVLHHMK 362 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIK----NRLVEQGVRVIAEDAECPVHVSGHPYPND 375 ++ I S ++ ++ Q V V AE AE P+ +S H ++ Sbjct: 363 SFAPDRKHTILFSGFQAAGTRGRAMLQGARETKIHGQWVPVRAEIAELPM-LSAHADGDE 421 Query: 376 LKRMYQWIR--PQVLVAIHGEPL 396 + R +R PQ +HGEP Sbjct: 422 IMRWLSALRRPPQQTFVVHGEPD 444 >gi|157164252|ref|YP_001467122.1| DNA polymerase III epsilon subunit [Campylobacter concisus 13826] gi|112801392|gb|EAT98736.1| metallo-beta-lactamase family protein [Campylobacter concisus 13826] Length = 200 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 22/154 (14%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G+ G N + + ++ID P D ++++ +NL AI T Sbjct: 9 GDFGTNCYIV----TKNGSSLVID-----PGDGAK---------EWVLQNAQNLKAILCT 50 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH + +L + L +PVY + F + E+ + +P I + V F Sbjct: 51 HGHFDHIYDVSELKNELKIPVYINKFDAFMCESDIFGYMKNTFVPDILVDGDESFVVDDF 110 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 S + P + I + +GD+ Sbjct: 111 SFKFHHFPGHTPGCSMIEINDA----MFSGDFLF 140 >gi|182626502|ref|ZP_02954252.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177908188|gb|EDT70752.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 263 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 40/251 (15%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSEKTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST----- 199 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKHKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 200 ----------NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-----RSII 244 + E +S + K I DIMK+ K ++ S+ + + +++I Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKYRKIILGHLSNTNNVPELAEQAVI 233 Query: 245 DIAEQIGRKIV 255 ++ I Sbjct: 234 NVLNAHKINIG 244 >gi|166031751|ref|ZP_02234580.1| hypothetical protein DORFOR_01452 [Dorea formicigenerans ATCC 27755] gi|166028204|gb|EDR46961.1| hypothetical protein DORFOR_01452 [Dorea formicigenerans ATCC 27755] Length = 265 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 3/129 (2%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L I ITH H DH L VP+YA+ I ++ K + Q Sbjct: 47 EELNGILITHEHIDHVQGLGVFSRKYEVPIYATKGTIEGIK-KISSIGKMPEGLFHEIQT 105 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSL 183 + +G +E +++H E I ++ D D D L Sbjct: 106 DETFTLGELKVEPFKISHDANEPSGYRIGDGKKSVAVATDLGKYDDYTVEHLKNLDAIVL 165 Query: 184 CAIGNEGIL 192 A + +L Sbjct: 166 EANHDLKML 174 >gi|110801158|ref|YP_697296.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|110675805|gb|ABG84792.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] Length = 263 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 40/251 (15%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S + + + + + IFITH H DH Sbjct: 14 SILVGSKKTKILIDAGLS--------GKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKGA 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +E K+ + + I S H Sbjct: 66 GILSRKFNIPIYANELTWKAMEKSL---GKIKEENIKIMPKRSTMSLNDLDITSFNTPHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST----- 199 + I+ + D ++ L I ++ L + Sbjct: 123 SVASTGYTIKHKGKSASIATDIGT---------FTEEILRNIRESEVILLESNHDVQMVK 173 Query: 200 ----------NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-----RSII 244 + E +S + K I DIMK+ K ++ S+ + + +++I Sbjct: 174 FGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELAEQAVI 233 Query: 245 DIAEQIGRKIV 255 ++ I Sbjct: 234 NVLNAHKINIG 244 >gi|288905745|ref|YP_003430967.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|306831843|ref|ZP_07464999.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978778|ref|YP_004288494.1| Metallo-beta-lactamase superfamily [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732471|emb|CBI14043.1| conserved metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|304426041|gb|EFM29157.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178706|emb|CBZ48750.1| Metallo-beta-lactamase superfamily [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 269 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K +ID G++ K + I ++ ++L AIFITH H DH + Sbjct: 19 SFYVETPQKRFLIDAGLTGKKITSLLAE--------IDRKPEDLDAIFITHEHSDHIKGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++ VYA+ +++ + F+ G + +G IES V+H Sbjct: 71 GVLARRYNLDVYANEKTWQMIDER-NMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 E + + V D + D A + + D Sbjct: 130 AVEPQFYRLMKDNKSFVVLTDTGYVSDRMAGIIENAD 166 >gi|297739593|emb|CBI29775.3| unnamed protein product [Vitis vinifera] Length = 184 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 29/165 (17%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 + PLG E+G + Y K I+IDCG+ + P+ I Sbjct: 25 IITPLGAGNEVGRSCVYMSY----KGKTILIDCGIHRAYSGM----AALPNFNEID--PS 74 Query: 67 NLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKR--------------- 109 + + +TH H DH +L + V+ + + + Sbjct: 75 TIDVLLVTHFHLDHAASLPYFLEKTTFNGQVFMTHAMKAIYKLLLSDYVKVSIVSVEDML 134 Query: 110 -VYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + + + + I ++V H + M +V Sbjct: 135 YDEQDILRSMDKIEVIDFHQTLEVNGIQFWCYTTGHVLSAAMFMV 179 >gi|331213271|ref|XP_003319317.1| endoribonuclease YSH1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298307|gb|EFP74898.1| endoribonuclease YSH1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 794 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 90/282 (31%), Gaps = 47/282 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL---PGVDLVFPDIT 59 +EE+ LG E+G + + Y S + ++ D G+ + P +D V Sbjct: 29 DEEMKITMLGAGQEVGRSCCVIEYKSTT----VVCDTGIHPAFSGMAALPFIDEVASGTA 84 Query: 60 FIMKERKNLMA-------IFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEA 107 + A + T H DH +L + + V+ + + Sbjct: 85 ARQENSYPEPALDPTFTFVLTTSFHLDHAASLTYIMENTNFKEGHGKVFMTHPTKAVYRF 144 Query: 108 KR-----------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 + ++ + ++ +G S H + Sbjct: 145 LMQDFVRMSTIGTDSELFNEEQMIASYDSINAIDYHQEISLGCLRFTSYPAGH-VLGAAM 203 Query: 151 LVIRSPVGNIVHTGDW--KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +I +++TGD+ + D I V + NE ++C+ST ++ Sbjct: 204 FLIEISGIRVLYTGDYSTEEDRHLIPARVPN-------WNEKPDVMICESTYGVQSLEPR 256 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 EK ++ + K V ++ R + ++ I ++ Sbjct: 257 FEKE-ERFTTLVQSILKRGGRVLMPVFALGRAQELLLILDEY 297 >gi|255543475|ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223547811|gb|EEF49303.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 493 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 106/331 (32%), Gaps = 48/331 (14%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHYG L WS P+Y + LL+ + Sbjct: 180 AYFLTHFHADHYGGLTKGWSH--GPIYCTQLTARLLKLCL----YVNSSFIHPLDLNTEY 233 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + + + NH P L R S +HTGD++ + + N Sbjct: 234 AIEGVRVTLLEANH-CPGAALLHFRLSNGLCYLHTGDFRASKVMQSYHL--------LVN 284 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-----NAKGCVLVTTFSSSVSRIRSI 243 + + AL D+T + S++ + + + K + ++V +S + + Sbjct: 285 QKVNALYLDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYS--IGKECVY 342 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE---QLIVIATG 300 + I++ +G ++ + A I++ S P++ ++ I++ Sbjct: 343 LSISKALGV----------KIYASASRRQILESFGWSDLSRSLCTQPKDTPLHVLPISSL 392 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + L + + ++ +L Sbjct: 393 RVETLKDYLKKYINQYRAVLAFRPTGWTY------------SENVGKKLDLIRPISKGNV 440 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H +LK ++++P ++ Sbjct: 441 TIYGVPYSEHSSFTELKEFVEFLKPDKIIPT 471 >gi|300691873|ref|YP_003752868.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum PSI07] gi|299078933|emb|CBJ51593.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum PSI07] Length = 261 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 16/179 (8%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G N L ++R I++DCG G+ + + Sbjct: 3 VRFASLGSGSD---GNALLVESSDGTTRTRILLDCG--------FGIRETVRRLERLGCA 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H DH G+ + + +VPV+ S R + + + Sbjct: 52 PESLNAILVTHEHGDHVGSAYAFAAKYNVPVWTSHGTC----RATASLRGADRAAIRFCR 107 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 A D +G I V H E + + + D + + + G +TD + Sbjct: 108 ADDVFSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTDLHAF 166 >gi|255531843|ref|YP_003092215.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344827|gb|ACU04153.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 461 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 92/281 (32%), Gaps = 58/281 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP-DITFIMKE 64 + LG ++ +M L I++DCG+ + K+ +L FP D Sbjct: 1 MKLTILGAAQQVTGSMHLL----QLDNYNIIVDCGLDYEKETYQNENLYFPFDPAA---- 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL------------------- 104 + + +THAH DH G L L + + +P L Sbjct: 53 ---IDLVILTHAHIDHSGNLPTLVRMGFNGQILCTPPTADLTELLLLDSVNIFLSKQNKR 109 Query: 105 LEAKRVYERVSK-KIPCISFQAGDKVDVGAFSIESV----------RVNHSIPETMALVI 153 +KR + ++ F+ E + H + ++ Sbjct: 110 SRSKRTKSGPEPLYLQKHVKDTVERFVTINFNKEFQINNQVSLTFIPIGHLLGAAAVILT 169 Query: 154 RSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS- 209 I TGD + +L T+ L + L+C+ST R + S Sbjct: 170 VHENGTIKKIAFTGDIGRKNYPLL---TNPQPL-----PPVDYLVCESTYGGRLHSTDST 221 Query: 210 -EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 E+ + + I + G +++ FS + R +++ + Sbjct: 222 LEQKLIETITESCIKYPGRLIIPAFS--IGRTQALAYALNK 260 >gi|95929350|ref|ZP_01312093.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95134466|gb|EAT16122.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 475 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 74/477 (15%), Positives = 144/477 (30%), Gaps = 96/477 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG ++ + G+ + ++IDCG+ G D P+I F ++ + A+ Sbjct: 15 GGASQVTGSCHELLCGA---DESLLIDCGL------FQGADQRNPEIDFGIE---AIRAL 62 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRV-----YERVSKKIPCI 121 +TH H DH G + L + P+Y SP + L LE E + K Sbjct: 63 IVTHVHLDHVGRIPYLLAAGFSGPIYCSPASAVLLPLVLEDALKVGVTHNEYLIAKALER 122 Query: 122 SFQAGDKVDVGAF-----------SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + +V++G + +I H I ++++ IR D Sbjct: 123 VKKQIVRVELGTWLSLTPLFSSAVAIRLQPAGH-ILGSVSVQIRLGERRDY--CDVVFSG 179 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT-CISEKGIKKNIYDIMKNAKGCVL 229 D + + L+ +ST R + K I + +G +L Sbjct: 180 DLGAPYAPLLSAPKPLYR--ADTLILESTYGDRCHEQRRLRRQRLKAIIERALLNRGVIL 237 Query: 230 VTTFSSSVSRIRSIIDIAEQI----------------GRKIVLLGSSLKRVVSVAIDVGI 273 + FS + R + ++ E + ++V+ R + + Sbjct: 238 IPAFS--IGRTQELLYELEGLIHHYKDAPVTSDLCWDDLEVVVDSPLASRFTELYRQLAD 295 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV----- 328 D+ + G +P + S + + L + + +A Sbjct: 296 C-WDKEGHARLRQGRHPLSFAQLTTINSHDDHLQTVHYLKKKARPCIVIAASGMCSGGRI 354 Query: 329 ------------------IFSSRAIPGNEVAIG-------HIKNRLVEQGVRVIAEDAEC 363 + + PG E+ + + V Sbjct: 355 VNYLKALLGDERTDVVFVGYQADGTPGQEIQTYGPRGGYVRLDGKKYSIKASVHTLSG-- 412 Query: 364 PVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEP-LHLVAHKELALQEGIACVPPVR 417 S H +DL R + +R P ++ +HGE +L + V Sbjct: 413 ---YSAHAGQDDLVRFVKRMRHHPAHIILVHGESLARESLQAKLRNACPDSVVQLPD 466 >gi|82596170|ref|XP_726151.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Plasmodium yoelii yoelii str. 17XNL] gi|23481438|gb|EAA17716.1| cleavage and polyadenylation specificity factor, 73 kDa subunit [Plasmodium yoelii yoelii] Length = 942 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 14/106 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGG E+G + + S + IM+DCG+ P + + Sbjct: 1 MSN--INIVCLGGASEVGRSCVIIE----SEKTSIMLDCGI------HPAFMGIGCLPIY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL 104 + + ITH H DH GAL L + V+ + + Sbjct: 49 DAYDISKIDVCLITHFHMDHSGALPYLINKTRFKGRVFMTEATKSI 94 >gi|195978499|ref|YP_002123743.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975204|gb|ACG62730.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 269 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 17/164 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + ++ ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKRRLLIDAGLTGKKITSLLAE--------IDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + ++ VYA+ +++ + F+ Sbjct: 51 PEDLDAILITHEHSDHIKGVGIMARKYNLDVYANEKTWQMIDER-HMIGNLDVAQKHVFE 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G + G IES V+H + I + V D Sbjct: 110 RGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNRSFVMLTDTGY 153 >gi|228994181|ref|ZP_04154081.1| hypothetical protein bpmyx0001_49040 [Bacillus pseudomycoides DSM 12442] gi|228765633|gb|EEM14287.1| hypothetical protein bpmyx0001_49040 [Bacillus pseudomycoides DSM 12442] Length = 264 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + ++ ++ID G+S + +++ I +TH H DH L L Sbjct: 21 TEKQKLLIDAGLSGKATEAL--------FQQAELNIQDISGILVTHEHSDHIKGLGVLAR 72 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 73 KYQLPVYANEKTWSAMEHLI---GNIPTDQKFVFSIGDVKTFGDIEVESFGVSHDAAEPM 129 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + D Sbjct: 130 FYAFHHNGRKLALITDTGY 148 >gi|319937372|ref|ZP_08011779.1| hypothetical protein HMPREF9488_02614 [Coprobacillus sp. 29_1] gi|319807738|gb|EFW04331.1| hypothetical protein HMPREF9488_02614 [Coprobacillus sp. 29_1] Length = 203 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 17/137 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + S ++ I+ID G + G + FI + L AI +TH H D Sbjct: 13 NCYVV---YNSEKECIVIDPGAN-------GQKVA----KFIDENELFLKAILLTHGHFD 58 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H GA+ L+S +Y +I L+ + S + +A DK+ + + I Sbjct: 59 HVGAVDYLYSKYKCSIYTHKESIELMRDAQLNLSFYEKSFTVDSPIQEAHDKMVLAGYEI 118 Query: 137 ESVRVNHSIPETMALVI 153 + + + + I Sbjct: 119 RWLLLEGHCQGSSMIYI 135 >gi|171780119|ref|ZP_02921023.1| hypothetical protein STRINF_01907 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281467|gb|EDT46902.1| hypothetical protein STRINF_01907 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 269 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++ID G++ K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYVETPQKCLLIDAGLTGKKITSLLAE--------IDRKPEDLDAILITHEHSDHIKGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++ VYA+ +++ + F+ G + G IES V+H Sbjct: 71 GVLARRYNLDVYANAKTWQMIDER-NMIGKLDVGQKHVFERGKTLTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + + V D + D A + + D Sbjct: 130 AVDPQFYRLMKDNKSFVVLTDTGYVSDRMAGVIENAD 166 >gi|325479608|gb|EGC82701.1| metallo-beta-lactamase domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 263 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 15/147 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + + I+ID G F + G+ + + ++ +L AIF+TH H Sbjct: 13 GNCSFIEHKGVK----ILIDAG--FSGKKIEGL------MEKVGEKASDLDAIFLTHEHN 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L ++P+YA+ + + K+ F+ + ++ + I Sbjct: 61 DHVQGAGVLSKRFNIPIYANAGTW---KGFSKKAKRLKEENIKIFKTNEFLNFKSMDILP 117 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++H E V + D Sbjct: 118 IAIHHDANEPCGYVFYLGNKKVTILSD 144 >gi|229014628|ref|ZP_04171742.1| hypothetical protein bmyco0001_50280 [Bacillus mycoides DSM 2048] gi|228746639|gb|EEL96528.1| hypothetical protein bmyco0001_50280 [Bacillus mycoides DSM 2048] Length = 249 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNYRKLALITDTGY 133 >gi|313200387|ref|YP_004039045.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|312439703|gb|ADQ83809.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 255 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 57/172 (33%), Gaps = 35/172 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG N S I+ID G +++ + Sbjct: 6 LGCSGGIGGN---LRTTSLLVDDDILIDAGTGVGDLS--------------IEQMARIDH 48 Query: 71 IFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI--- 121 +F+TH+H DH L + V +YA P + L+ + + Sbjct: 49 VFLTHSHLDHIACLPLMLDTVAGLREAPVTIYALPETLHALKTHIFNWIIWPDFSAVPSE 108 Query: 122 --------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G V + SI + NH++P + + S ++V TGD Sbjct: 109 TSPLLRYAEVAQGKAVSLSGRSITPLPANHTVP-AVGYWLDSGANSMVFTGD 159 >gi|291165780|gb|EFE27828.1| metallo-beta-lactamase family protein YycJ [Filifactor alocis ATCC 35896] Length = 261 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 15/150 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N GS I+ID G+ ++ + + +E K++ IF+TH H Sbjct: 12 GNCHFISDGSTK----ILIDAGL-----SGKKIEKNLLEHS---QELKDIQGIFVTHEHL 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L +PVYA+ +E + + GD V+VG +++ Sbjct: 60 DHIKGVGILSRRYDIPVYATEGTWRGMEEGL---GNIVEKNKKIIEIGDSVEVGTIQLDA 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V H E I I D Sbjct: 117 YSVLHDALEPCGFTITDGRKKISIATDLGY 146 >gi|116748839|ref|YP_845526.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697903|gb|ABK17091.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 535 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 67/480 (13%), Positives = 127/480 (26%), Gaps = 87/480 (18%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 LG G + + L + +IDCG+ + ++ + Sbjct: 3 ITCLGASGCVTGSSFLL-----DNGSKYLIDCGLFQGGKQMEALNRKPWPF-----NPAD 52 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI-------- 118 + A+F+THAH DH G + L +Y + L + + +++ Sbjct: 53 VSALFLTHAHIDHCGRIPKLVKDGFRGRIYTTLPTAELCKILLLDSAHIQEMEAEWQTRK 112 Query: 119 ------------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + Q + H I L + Sbjct: 113 GRRVGEQDVEPLYTVEDATACFPLFSVVDQNEPITVNDDLKVCYRNAAH-ILGASMLEVW 171 Query: 155 SPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + +V +GD I+ D + + L +ST R E Sbjct: 172 NGGQPQPYKVVFSGDIGYRRQLIVR---DPEPIAD-----ADMLFVESTYGNRNHKSFDE 223 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAID 270 K+ + I + + V + +V R + ++ + RK ++ S+ V + Sbjct: 224 SR-KELLEAIQFSYRHREKVIIPAFAVERTQELLYVIGDFFRKKLIP--SMPLYVDSPLA 280 Query: 271 VGIIKKDQLFLSDESF--------GLYPREQLIVIATGSQGEPRSAL-----------AQ 311 + + G P + ++ + S E + Sbjct: 281 IAATDIFRRMKDFYDIETRAILDSGNDPFDFPELVLSRSSQESMAINQAAGPAIVIAGNG 340 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVHV- 367 + L SS I G + + V + VH Sbjct: 341 MCTAGRIKHHLKHNLWRAGSSVVIVGFQAEGTLGRRLVEGAESVKVLGEKVVVKSKVHTI 400 Query: 368 ---SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 S H L R +V IHGE E+ + V G ++ Sbjct: 401 GGFSAHADQRSLLEWLGHFRNPAMRVVVIHGEESTSTEFAEIVNKRFGFPVHVPAIGDVI 460 >gi|313890254|ref|ZP_07823888.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121359|gb|EFR44464.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 270 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 80/238 (33%), Gaps = 18/238 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G++ + + I ++ ++L AI ITH H DH + Sbjct: 20 SFYLETPQKRILVDAGLT--------GKKIISLLAEIDRKPEDLDAILITHEHSDHIKGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L H+ +YA+ +++ + F + G IES V+H Sbjct: 72 GVLARKYHLDIYANQKTWQIIDDR-NMIGKIDTTQKYIFDRDKVMTFGDLDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS------ 198 + + V D D + G +++ D+ N I L S Sbjct: 131 AADPQFYRFMKDNKSFVMLTDTGYVSDRMSGIISNADAYLIESNHDIEILRSGSYPWSLK 190 Query: 199 -TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 +G +E G I I K L + I+ + + + + Sbjct: 191 QRILSDKGHLSNEDGAGAMIRSIGNKTKKIFLGHLSKEN--NIKELAHMTMENQLAMA 246 >gi|149196433|ref|ZP_01873488.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] gi|149140694|gb|EDM29092.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] Length = 255 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 17/147 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L + +IDCG+SF + + + K+ L IF+TH H Sbjct: 13 GNCTLIE----NDTSAYIIDCGLSF--------KKLCEKMKALGKDLGKLKGIFVTHEHA 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L + VYA+ +L+ K + C+ F+ G ++ + + Sbjct: 61 DHASGVRICADKLDIAVYANHDTALMLKQKNRMGKK-----CVIFENGQEIFLDGMCFQP 115 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 V H T+A + I D Sbjct: 116 FSVPHDAVNTVAYKVECEGRKISVLTD 142 >gi|309807772|ref|ZP_07701705.1| conserved domain protein [Lactobacillus iners LactinV 01V1-a] gi|308168979|gb|EFO71064.1| conserved domain protein [Lactobacillus iners LactinV 01V1-a] Length = 61 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ + LGGV E G NM YG + ++D G+ +P L G+D+V PD+ F Sbjct: 2 TQQIKIMMLGGVRENGKNM----YGVQVDDEIFVLDAGLKYPDSSLLGIDIVIPDLQF 55 >gi|300704483|ref|YP_003746086.1| metal-dependent hydrolase of the beta-lactamase superfamily i [Ralstonia solanacearum CFBP2957] gi|299072147|emb|CBJ43479.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum CFBP2957] Length = 261 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 22/182 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L ++ +++DCG G+ + + Sbjct: 3 VRFASLGSGSE--GNALLVESSDGTTSTRVLLDCG--------FGIRETVRRLERLGCAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCI 121 ++L AI +TH H DH G+ + + ++PV+ S L R + + Sbjct: 53 ESLDAILVTHEHGDHIGSAYAFAAKYNIPVWTSHGTYRATASL--------RGADRAAIR 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D +G I V H E + + + D + + + G +T Sbjct: 105 FCRADDVFSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLH 164 Query: 182 SL 183 + Sbjct: 165 AF 166 >gi|312142733|ref|YP_003994179.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] gi|311903384|gb|ADQ13825.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] Length = 277 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 21/135 (15%) Query: 35 IMIDCGVSFPKDD----LPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 ++ID G+S + + G+D ++ A+ ITH H DH + L Sbjct: 26 VLIDAGLSGKELERRMNSLGID------------PTSIDALLITHEHNDHIKGVGVLSRR 73 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 ++P++A+ E K KK F+ +G +V+H + + Sbjct: 74 YNIPIFANQGTWSGAEKKL---GKIKKENRRVFK--GDFMIGDLGFIPYQVSHDAEDPVG 128 Query: 151 LVIRSPVGNIVHTGD 165 + R+ IV D Sbjct: 129 YICRAADKKIVLATD 143 >gi|227872293|ref|ZP_03990651.1| beta-lactamase superfamily I metal-dependent hydrolase [Oribacterium sinus F0268] gi|227841865|gb|EEJ52137.1| beta-lactamase superfamily I metal-dependent hydrolase [Oribacterium sinus F0268] Length = 258 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 25/211 (11%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I++D GV G+ + + + K++ I +TH H DH A+ L +P Sbjct: 24 ILLDAGV--------GIRSIESALRGLDISCKDIEGICVTHEHIDHIKAIGSLCRKYTIP 75 Query: 95 VYASPFAIG--LLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 VYA+ + LL K + +G S+ V+H + +A Sbjct: 76 VYATLGTLQGILLCDAMKEF---PKDLLRPILKDESFQIGDLSVLPFSVSHDTRDPVAYR 132 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS--TNAMR-EGTCIS 209 + ++ D D+ ++ + +L L + T + Sbjct: 133 VSCGEKSVAVVTDLG---------CYDEYTISHLQKLDVLLLEANHDVTMVEKGPYPMAL 183 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ I N+ + G +L + ++ Sbjct: 184 KRRILSNVGHLSNLHSGELLKELVHPDLKKV 214 >gi|229170164|ref|ZP_04297851.1| hypothetical protein bcere0007_50980 [Bacillus cereus AH621] gi|228613309|gb|EEK70447.1| hypothetical protein bcere0007_50980 [Bacillus cereus AH621] Length = 249 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|312623045|ref|YP_004024658.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203512|gb|ADQ46839.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 265 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 71/196 (36%), Gaps = 24/196 (12%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++E++F PL G G N L Y I++D GVSF K G++ + + Sbjct: 2 SDEVLFCPLYSGSSG----NSILISY----KDTSIIVDAGVSFKKLTQ-GLEKIGFN--- 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 K + AI ++H H DH + L+VP+ + ++ + Sbjct: 50 -----KKIDAILLSHDHSDHVKCAGIYFRKLNVPIITNYKTWESIKNSL---GKVDESYV 101 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVT 178 G VG+ I++ + H + M + D D A + D + Sbjct: 102 KLIDTGTSFSVGSIGIDTFSIPHDASDPMGFCFYFKDKKVSICTDVGHVNDSVARMIDFS 161 Query: 179 DKDSLCAIGNEGILAL 194 D L + + +L Sbjct: 162 DIILLESNHDVEMLMF 177 >gi|229065121|ref|ZP_04200414.1| hypothetical protein bcere0026_51740 [Bacillus cereus AH603] gi|228716150|gb|EEL67869.1| hypothetical protein bcere0026_51740 [Bacillus cereus AH603] Length = 249 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|229020686|ref|ZP_04177415.1| hypothetical protein bcere0030_51610 [Bacillus cereus AH1273] gi|229026902|ref|ZP_04183226.1| hypothetical protein bcere0029_51670 [Bacillus cereus AH1272] gi|228734405|gb|EEL85075.1| hypothetical protein bcere0029_51670 [Bacillus cereus AH1272] gi|228740614|gb|EEL90883.1| hypothetical protein bcere0030_51610 [Bacillus cereus AH1273] Length = 249 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|229136287|ref|ZP_04265034.1| hypothetical protein bcere0014_51560 [Bacillus cereus BDRD-ST196] gi|228647159|gb|EEL03247.1| hypothetical protein bcere0014_51560 [Bacillus cereus BDRD-ST196] Length = 249 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|241889038|ref|ZP_04776342.1| beta-lactamase domain-containing protein [Gemella haemolysans ATCC 10379] gi|241864287|gb|EER68665.1| beta-lactamase domain-containing protein [Gemella haemolysans ATCC 10379] Length = 271 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 18/213 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G++ V ++ I ++ K++ AIF+TH H DH + Sbjct: 14 SIYIEHNNFRCLVDAGLT--------GKKVVENLAQIERDIKDINAIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++PVYA+ + +S + + K+ G + S V+H Sbjct: 66 GVLARKYNIPVYANALTW---QNMTKCGEISSDLKFNFEKEESKI-FGDVVVNSFGVSHD 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL--CAIGNEGILAL----MCDS 198 + D D ++ V D ++ + E +L Sbjct: 122 AINPQFYTFECEGKRVSILTDTGYVSDKMIDYVKDSHTIVYESNHEENVLLSGPYPWSTK 181 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + I+ + V + Sbjct: 182 QRILSDMGHLSNTDSANYLTKIVGDNTKNVFLA 214 >gi|298373321|ref|ZP_06983310.1| VicX protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274373|gb|EFI15925.1| VicX protein [Bacteroidetes oral taxon 274 str. F0058] Length = 267 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 12/149 (8%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N G + R I+ID G++ V + ++ + IFITHAH D Sbjct: 17 NCYYVG----TERYGILIDAGINVRT-----VKKCLKEYGLGLEN---IYGIFITHAHTD 64 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H L +VP+Y++ + A F DKV + F ++S Sbjct: 65 HVKYAGVLAEKYNVPIYSTKTVFEGINANDKLLPKILSTNRKIFNKTDKVTIKDFVVQSF 124 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H I + M I +V D Sbjct: 125 PVSHDINDAMGYSISFRGKTMVIATDLGY 153 >gi|229164412|ref|ZP_04292341.1| hypothetical protein bcere0009_51700 [Bacillus cereus R309803] gi|228619062|gb|EEK75959.1| hypothetical protein bcere0009_51700 [Bacillus cereus R309803] Length = 249 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDISGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|292670649|ref|ZP_06604075.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292647676|gb|EFF65648.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 536 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 77/274 (28%), Gaps = 50/274 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L G ++DCG+ L + + Sbjct: 1 MRIEFLGAAHVVTGSCYLLHVG----DHRYLVDCGMYQGTRRLREM-----NYEEFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 + A+F+THAH DH G + L VYA+ L+ ++ Sbjct: 52 AEIEAVFLTHAHIDHCGRIPRLVREGFRGKVYATQSTCDLVRIMLPDSAHIQESDTELFN 111 Query: 120 --------------------------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 + V + H I + L + Sbjct: 112 RKNARRSEAPISPLYTQADAFAALELFEPVSYHAPLQVNNLKLVFRDAGH-ILGSAILEM 170 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + D + D +++ G L+ +ST R ++ Sbjct: 171 TVEENGQTTKLVFSGDLGQPNQPILRDPETIV-----GADFLLVESTYGDRIHRDYDKET 225 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 + + G V++ +F+ V R ++++ Sbjct: 226 ALLEVIRDTMDRGGNVIIPSFA--VGRTQTLLYY 257 >gi|87309151|ref|ZP_01091288.1| metallo-beta-lactamase family protein [Blastopirellula marina DSM 3645] gi|87288142|gb|EAQ80039.1| metallo-beta-lactamase family protein [Blastopirellula marina DSM 3645] Length = 462 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 71/494 (14%), Positives = 136/494 (27%), Gaps = 112/494 (22%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK--- 63 G G + + L G +++DCG+ + K Sbjct: 3 RITFYGAAGTVTGSKYLVEAGKAK----VLVDCGL----------------FQGLKKLRE 42 Query: 64 -ERKN-------LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------- 106 K + ++ +THAH DH G L V +P L + Sbjct: 43 LNWKKLPFDAATVNSVVLTHAHIDHIGFLPRFVRDGFRNKVVCTPATKELAKLLLLDSAK 102 Query: 107 -----------AKRVYE-------------RVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 K R K++ + ++ + + Sbjct: 103 NQKRDADYLNRKKLSKHSPALPLYNAEDARRAIKRLKAVPRGEWREL-LDPIWVRFHDAG 161 Query: 143 HSIPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 H + + + + I+ +GD D + D L+C+S Sbjct: 162 H-LLGSNMIEMEIRDRDPPLRILFSGDVGRYDAPL---YFDPA-----PPPPCDYLICES 212 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID------IAEQIGR 252 T R+ I + G +L F+ V R + +I A +I R Sbjct: 213 TYGDRDHPQEDILDILAERVNKAFQRGGVMLFAAFA--VGRSQQLIYLLQVLMHAGRIPR 270 Query: 253 KIVLLGSSLK----RVVSVAIDV-----GIIKKDQLFLSDESFGLYPREQ---------- 293 + L S + ++ G + L + L + Sbjct: 271 FPIFLDSPMAVDATKIFRTFSQDHDLSEGQLSPPSSVLDGPNVELVRDHERSKQLNRVTG 330 Query: 294 -LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV-IFSSRAIPGNEVAIGHIKNRLVE 351 ++I++ L L R R + + + G ++ G R+ Sbjct: 331 PAVIISSSGMMTGGRILFHLKR---RLPDPKNTVLLGGYMAAGTRGRDMQEGRSFVRIHG 387 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELALQEGI 410 Q + V + +SGH ++L R + + +P+ HGEP + + Sbjct: 388 QDIPVR-AAIDSVSGLSGHAGRSELLRWLKDLPKPKQTFITHGEPDSAASFAAALRDQYQ 446 Query: 411 ACVPPVRNGKMLRL 424 + G L Sbjct: 447 FDTVIPQLGDSFEL 460 >gi|187777452|ref|ZP_02993925.1| hypothetical protein CLOSPO_01019 [Clostridium sporogenes ATCC 15579] gi|187774380|gb|EDU38182.1| hypothetical protein CLOSPO_01019 [Clostridium sporogenes ATCC 15579] Length = 261 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I++D G+S ++L + I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILVDAGLSGKS-----IELAL---SRIKESPSSIDGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKNVGKIKEHN-------IEILDGKSVVLNDMEINPFPI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|255657607|ref|ZP_05403016.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-23m63] gi|296452713|ref|ZP_06894403.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP08] gi|296880034|ref|ZP_06904004.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP07] gi|296258403|gb|EFH05308.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP08] gi|296429011|gb|EFH14888.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP07] Length = 265 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 16/146 (10%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N GY + + I++D G+S K G+ + D L IF Sbjct: 8 GSGSSG-NCHYIGYKNTN----ILVDAGLS-GKRITTGLKDIGID-------ADKLKGIF 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH L +PV+A+ ++ K K F+ +G Sbjct: 55 ITHEHVDHIKGAGILSRKFDIPVFANIKTWCSMKDKL---GDIKDKNMKVFENDKTYSLG 111 Query: 133 AFSIESVRVNHSIPETMALVIRSPVG 158 + + H + + + Sbjct: 112 DIIVRPFSIEHDASDPVGYNFYTEND 137 >gi|312891514|ref|ZP_07751028.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] gi|311295977|gb|EFQ73132.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 19/147 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + I++D G+S + + + + N+ A+FI+H H Sbjct: 16 GNCYYVG----NEQDAILVDAGISCRETEK--------RMQRLGLSMHNVRAVFISHEHS 63 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY +P + I F+ + V VG + + Sbjct: 64 DHIRGLPVLAKKYQLPVYITPRTLQYGGLALDEN------LVIPFRGYEPVRVGDLLVTA 117 Query: 139 VRVNHSIPETMALVIRSPVGNI-VHTG 164 H + + +I + V T Sbjct: 118 FPKLHDASDPHSFIISYRDVKVGVFTD 144 >gi|82548302|gb|ABB82992.1| putative mRNA processing factor [uncultured organism HF10_3D09] Length = 437 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 48/394 (12%), Positives = 125/394 (31%), Gaps = 60/394 (15%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 +++D G++ P + + L AI ITH+H DH G + L S + Sbjct: 46 RLLLDYGIA---PTKP--------PRYPNEAPHVLNAI-ITHSHIDHLGMVPWLASNHNT 93 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIP-----------------CISFQAGDKVDVGAFSI 136 ++A+ + E I + + + + Sbjct: 94 TLHATDLTAAISEMMWYDCHKVSSIEGYPLPWDKRDIDLALSAWKTHPFNESWSQDDWKL 153 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI--LAL 194 E + H IP L + +P ++ +GD+ D + IG + + L Sbjct: 154 ELHKAGH-IPGAAMLHVETPNKKVLFSGDFDTRDSQLT-----------IGAKPVKSDVL 201 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---- 250 + T R+ E+ ++ I +++ + + R + ++ + + Sbjct: 202 FVEGTYGGRDHP-PKEEENERFIERVIEVVNRGGTALVPAFANGRTQDVVMLLHKYLPEL 260 Query: 251 GRKIVLLGSSLKRV-------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + +G + R+ + + + +S +S + ++++T Sbjct: 261 NVHVDGMGKRVARLQMDHPETLRDPSALESAWRWCRRVSSKSDRKKALDADVIVSTSGML 320 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + ++ L+R + G + + + + + + + Sbjct: 321 DGGPSVWYLNRLRHD---RKNAILLTGYQARNTGGRRLLEEARVPIFGKLASIELDVDQY 377 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 S H ++ + + + + +V H +P Sbjct: 378 SF--STHAGHQEIVQFAEECQAEDVVIYHSDPNM 409 >gi|94313444|ref|YP_586653.1| exonuclease/RNA metabolizing protein [Cupriavidus metallidurans CH34] gi|93357296|gb|ABF11384.1| exonuclease/RNA metabolizing enzyme, metallo-beta-lactamase family [Cupriavidus metallidurans CH34] Length = 452 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 65/442 (14%), Positives = 126/442 (28%), Gaps = 82/442 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + + + ++IDCG+ F + ++L A Sbjct: 6 LGATDTVTGS----RFLIDTGEARVLIDCGL-FQGYKAL----RLRNWDRFPISPESLDA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSK------- 116 + +THAH DH G L L V+ + L A E + Sbjct: 57 VVLTHAHIDHSGYLPLLVKRGYKGRVHCTTGTAELCGLLLPDSAHLAEEDANYANRKGYS 116 Query: 117 ------KIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALVIRSPVG 158 + ++ + E R H I + ++ I + Sbjct: 117 RHQPALPLYTVADAMHALEHLKPAPYSKRVTIARGVEAEFHRAGH-ILGSSSVTIHAKGR 175 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 I+ +GD DD ++ L+ +ST R + +I Sbjct: 176 RILFSGDLGPQDDMLMRPP--------EPPTAADYLIVESTYGDRLHPEGDPIELLADII 227 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK-----IVLLGSSLKRVVSVAIDVGI 273 G V++ F+ V R + ++ ++ ++ + + +S + A + Sbjct: 228 RKTVARGGSVIIPVFA--VGRAQLLLYCLYRLRQRRRFPDVPIYLNS--PMAIDATRILT 283 Query: 274 IKKDQLFLSDESFG---------LYPREQLIVIATGSQGEPRSALAQLSRGE--MRNVKL 322 D+L + E+ E + + + L+ G Sbjct: 284 EHTDELRIDPETCAAACSVAIPTRSMEESIRINRVDQPKIILAGSGMLTGGRVVHHLESF 343 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED-------AECPVHVSGHPYPND 375 + S+ + G + A Q + E H S H + Sbjct: 344 GQDPR---STFLLVGFQAAGTRGATLASGQRTLRMHGREVELRASVEQIRHFSAHADADG 400 Query: 376 LKRMYQWI--RPQVLVAIHGEP 395 L I P+ +HGEP Sbjct: 401 LMDWMSAIGTPPRQTFIVHGEP 422 >gi|295402152|ref|ZP_06812111.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112728|ref|YP_003991044.1| beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294975835|gb|EFG51454.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217829|gb|ADP76433.1| beta-lactamase domain protein [Geobacillus sp. Y4.1MC1] Length = 264 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + + +++D G+S + + I ++ + L AI +TH H DH L Sbjct: 17 FYIETEQHRLLVDAGLSGKQLEQL--------FAQIDRDLRELTAILVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ +E F G G +ES V+H Sbjct: 69 VIARKYQLPIYANEKTWKAMEGLI---GDIPTEQKFIFPLGTVRSFGDLEVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D + D + + +L + Sbjct: 126 AEPMFFVFHHEGKKLALITDTGYVSDRMKGIIKNADVFIFESNHDVEMLRMGRYPWNVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEEAGLALADVIGDRTKRIYLAHLSQD 222 >gi|225548255|ref|ZP_03769540.1| hypothetical protein RUMHYD_00235 [Blautia hydrogenotrophica DSM 10507] gi|225040595|gb|EEG50841.1| hypothetical protein RUMHYD_00235 [Blautia hydrogenotrophica DSM 10507] Length = 265 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 17/182 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G +++D G+S ++ L +D+ D+ I ITH Sbjct: 12 GNCIYVGSDCAH----VLVDVGISKKRIEEGLRSIDMDVRDM----------DGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + H+P+YA+ I ++ + Q ++ + ++ Sbjct: 58 HSDHMKGLGVMSRKYHLPIYATRGTIEAIQE-MASVGRMPEGLFHEIQEDEEFQIKDLTV 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 ++H + + + ++ D DD + ++ D+L N + L Sbjct: 117 RPFHISHDAAQPVGYRLNCKEQSVGIATDMGTYDDYTVRNLQKLDALLLEANHDVRMLQV 176 Query: 197 DS 198 S Sbjct: 177 GS 178 >gi|224093392|ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa] Length = 537 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 103/336 (30%), Gaps = 31/336 (9%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 K F+THAH+DH + + P+YA+ L+ + + Sbjct: 19 NSKRKRHHFLTHAHKDHTSGI---LTHSCYPIYATHLTKLLV---LQNYPQLEGSLFVGI 72 Query: 124 QAGDKVDV----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + G+ V G F + + NH P + + GNI+HTGD +L Sbjct: 73 EVGESVVFNDPDGEFKVTAFDANH-CPGAVMFLFEGNFGNILHTGDCRL--TPEGVRCLP 129 Query: 180 KDSLCAIGNEG---ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + G E + + D T S+ + + + + +V Sbjct: 130 EKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLNCIWKHPAATVVYLTCDL 189 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + + ++E G KI + + + + L S Sbjct: 190 LGQEDVLAAVSETFGSKIFVDE---VANTESFRALTLTVPEILTQDPSSRFHM------- 239 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVR 355 + A+ L + +I S E + R + Sbjct: 240 --FDGFPKLYERAAKKIAE--AQANLQPEPLIIRPSAQWYACEEGYSETESQRKLRFNEA 295 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ V S H +L+ Q + P+ +V+ Sbjct: 296 VRDPNSVWHVCYSMHSSRGELEWALQLLVPKWVVST 331 >gi|297569828|ref|YP_003691172.1| beta-lactamase domain-containing protein [Desulfurivibrio alkaliphilus AHT2] gi|296925743|gb|ADH86553.1| beta-lactamase domain-containing protein [Desulfurivibrio alkaliphilus AHT2] Length = 262 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 38/199 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LGG + N G ++ID G S + + G+D Sbjct: 1 MRFCVLGGGSK--GNATYVEAG----ETRLLIDAGFSGRELETRLDALGID--------- 45 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ ++H H DH L H+P+YA+ + Sbjct: 46 ---PAGLSAVLLSHEHGDHIRGAGVLSRRYHLPLYANRPTLQAAARNL-----GSPAAVH 97 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 F G GA + V+H E + ++++ + H D + Sbjct: 98 EFTTGATFTCGAIKVHPFAVSHDAAEPVGFLLQAGGLRLGHCTDLGM-----------VS 146 Query: 182 SLCAIGNEGILALMCDSTN 200 L G AL+ + + Sbjct: 147 RLARHRLTGCHALVLECNH 165 >gi|15896774|ref|NP_350123.1| metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|15026632|gb|AAK81463.1|AE007850_4 Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|325510945|gb|ADZ22581.1| Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum EA 2018] Length = 261 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 12/155 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S ++ID G+S + + I ++ + IF+TH H DH + Sbjct: 14 SIFVASDNSKVLIDAGLS--------GKTIEKALKEIKEDPNEIDGIFVTHEHSDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++P+YA+ +A K D +++ +I + ++ H Sbjct: 66 GVLSRKYNIPIYANELTW---KAMMNSIGKIKDDNIKIIT-QDYIEIKDMNILNYKIPHD 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I S + D D + ++D Sbjct: 122 AASPCGYKILSGNKSACVATDLGHFADEVKSKISD 156 >gi|322385037|ref|ZP_08058687.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] gi|321270947|gb|EFX53857.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] Length = 268 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K +++D G+S K ++ I ++ + Sbjct: 10 SILASGSSG----NC----FYLETDQKRLLVDAGLSGKKITSL--------LSEIDRKPE 53 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L AI +TH H+DH + L ++ +YA+ A F+ G Sbjct: 54 DLDAILVTHEHKDHIHGVGVLARKYNLDIYANEATW---RAMEKDLGKLDASQKHIFEMG 110 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G +ES V+H + V D + D A + + D + Sbjct: 111 KMKTFGDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAGVIENADAYLIE 170 Query: 185 AIGNEGIL 192 + + IL Sbjct: 171 SNHDIEIL 178 >gi|262037909|ref|ZP_06011334.1| metal dependent hydrolase [Leptotrichia goodfellowii F0264] gi|261748052|gb|EEY35466.1| metal dependent hydrolase [Leptotrichia goodfellowii F0264] Length = 266 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 12/144 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++ +ID G F + I + +++ IF+TH H DH L L Sbjct: 26 IEMGKRKFLIDAG--FSGKKT------IEKLNNIERRIEDIDGIFVTHEHSDHIQGLGVL 77 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVY G+++ K + I+F +K+ + I S V H + Sbjct: 78 SRKFDIPVYLHEITYGMIKEKV----GKIEKKNINFINEEKITIDDCVINSFEVMHDAEK 133 Query: 148 TMALVIRSPVGNIVHTGDWKLDDD 171 + + + D ++ Sbjct: 134 CLGFTFEHEDKKLAYASDVGCTNN 157 >gi|152977661|ref|YP_001377178.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026413|gb|ABS24183.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 264 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + ++ +++D G+S + +++ I +TH H DH L L Sbjct: 21 TDKQKLLVDAGLSGKATEAL--------FEQAELNIQDISGILVTHEHSDHIKGLGVLAR 72 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 ++PVYA+ +E F GD G +ES V+H E M Sbjct: 73 KYNLPVYANEKTWNAMEHLI---GNIATDQKFIFSIGDVKTFGDIEVESFGVSHDAAEPM 129 Query: 150 ALVIRSPVGNIVHTGDWKL 168 V + D Sbjct: 130 FYVFHHGGRKLALITDTGY 148 >gi|330838791|ref|YP_004413371.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|329746555|gb|AEB99911.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 537 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 67/528 (12%), Positives = 142/528 (26%), Gaps = 93/528 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L S + +++DCG F G + + Sbjct: 1 MKLTFLGAAHTVTGSCYLLE----SEERKVLVDCG-MFQG----GRRIRELNYKEFCFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------- 109 L + +THAH DH G + L+ VYA+ L Sbjct: 52 AELDCVILTHAHIDHCGLVPKLYKEGFKGAVYATKVTCELAHIMLPDSAHIQEHDSEVLN 111 Query: 110 ----------------VYERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALV 152 + + + + + V + H I + + Sbjct: 112 RKIQRSGDTLIRPLYAMEDAEASLKHFVPKSYNELFRVENNIEVRFRDAGH-IIGSAIVE 170 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREG-TCISE 210 + + D + D + EG L+ +ST R E Sbjct: 171 MYVEENGKKTKLVFSGDLGQPDQPIIKDPTII-----EGADYLLLESTYGDRLHQFYDKE 225 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ---------------IGRKIV 255 + + + D M+ G +++ F+ V R ++++ + I Sbjct: 226 TALLEAVQDTMERG-GNLIIPAFA--VGRTQTLLYYFYKLWKEGRMEDVPIILDSPMAIA 282 Query: 256 LLGSSLKRV---------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 ++ + + G+ + L + + + A Sbjct: 283 ATRVFMENMQEFDETTVELLAKHGGGLPQMPHLRICETAEESRALNSQASSAVIISASGM 342 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + ++ N+ + T++F G + + + V + + Sbjct: 343 ADAGRILHHLKHNLW-RPESTILFVGYQAEG--SLGRRLIDGVKRVKVMGEEIAVKANIQ 399 Query: 367 ----VSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 S H N + I P + +HGEP + E + G Sbjct: 400 MLEGFSAHADMNQILDWLAPIQEPNPARVFVVHGEPSASESLAEQIEKRFKLKTYIPFFG 459 Query: 420 KMLRLFPDPIE----IIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSF 463 + + E + EV ++D + +RR+L Sbjct: 460 DSIVMTGREHEIHESHLPEVSVEKEMEDF--LRTVDSTYRQQRRRLLQ 505 >gi|329768164|ref|ZP_08259669.1| hypothetical protein HMPREF0428_01366 [Gemella haemolysans M341] gi|328838075|gb|EGF87694.1| hypothetical protein HMPREF0428_01366 [Gemella haemolysans M341] Length = 271 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 18/213 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G++ V ++ I ++ K++ AIF+TH H DH + Sbjct: 14 SIYIEHNNFKCLVDAGLT--------GKKVVENLAQIERDIKDINAIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++PVYA+ + +S + + K+ + S V+H Sbjct: 66 GVLARKYNIPVYANKLTW---QNMTKCGEISSDLKFHFEKEESKI-FDDVVVNSFGVSHD 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL--CAIGNEGILAL----MCDS 198 + D D ++ V D ++ + E +L Sbjct: 122 AINPQFYTFECEGKRVSILTDTGYVSDKMIDYVKDSHTIVYESNHEENVLLSGPYPWTTK 181 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + I+ ++ V + Sbjct: 182 QRILSDMGHLSNTDSANYLTKIVGDSTKNVFLA 214 >gi|295107897|emb|CBL21850.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Ruminococcus obeum A2-162] Length = 539 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 112/369 (30%), Gaps = 69/369 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI---TFIM 62 + +G E+ + Y ++ K ++DCG+ PD I Sbjct: 1 MKITFIGATHEVTGSC----YYLEAAGKKFLVDCGMEQG-----------PDYYENQEIP 45 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------Y 111 + +L + +THAH DH G L +++ PVYA+ L + Sbjct: 46 VKGSDLDFVLLTHAHMDHSGNLPAIYAKGFQGPVYATQATCHLCDIMLRDSAHIQMFEAE 105 Query: 112 ERVSK----------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 R K K + V H + Sbjct: 106 WRNRKGRRQGKPEFVPAYTMEDAMGVLKNFVPCPYEKTVTPAEGIRVRFVDAGHLLGSAS 165 Query: 150 ALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 VI + IV +GD + ++ D ++ +ST R Sbjct: 166 IEVIINEDGKEKKIVFSGDIGNLNQPLIKDPVYLH--------DADYVVMESTYGDRSHG 217 Query: 207 CISEKG-IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 + + + + G V++ +F+ V R + ++ QI + + G +V Sbjct: 218 DRPDYVGLLSEVIQRTFDRGGSVVIPSFA--VGRTQEMLYFIRQIKEEGRVHGHDNFKVY 275 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAE 324 + + ++ + + E L ++ G L ++ + + + E Sbjct: 276 VDSPLAN---EATTIFNEHIYDCFDEEALALVNKGINPLRFPGLKTSITSDDSKAINFDE 332 Query: 325 KDTVIFSSR 333 VI S+ Sbjct: 333 DCKVIISAS 341 >gi|313675442|ref|YP_004053438.1| RNA-metabolising metallo-beta-lactamase [Marivirga tractuosa DSM 4126] gi|312942140|gb|ADR21330.1| RNA-metabolising metallo-beta-lactamase [Marivirga tractuosa DSM 4126] Length = 459 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 67/480 (13%), Positives = 140/480 (29%), Gaps = 82/480 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG + + L I+IDCG+ F + + Sbjct: 3 VRVKFLGGAQSVTGSKFLLEI----DEYKILIDCGL-FQGLKAL----RLRNWDEFPIDV 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 + + AI +THAH DH G + + V+ + LLE AK E Sbjct: 54 QEIDAIILTHAHLDHSGYVPRMVKQGYKKNVFCTEATADLLEIMWMDSAKLQEEEAEFAK 113 Query: 119 PCISFQAGDKVDV-------------------------GAFSIESVRVNHSIPETMALVI 153 + + + + ++ H I ++ I Sbjct: 114 QKGYSKHANPLALYDQKDAEAALKTVIPKAFKKSFDLSENIQVKFYPAGH-ILGAASVEI 172 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 T + + LG +D + + +ST R + Sbjct: 173 ILKGA----TQEKNIIFSGDLGRNSDPVLFPPTFFKNSDVVFLESTYGDRLNDV---AKV 225 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVS 266 ++ + + + ++ + +V R ++++ ++ + L V Sbjct: 226 QEELKQHILDHMNEGVIMIPAFTVGRTQNLLFYLHELMRTGQIPHIPVYLDSPMAISVTH 285 Query: 267 VAIDVG--IIKKDQLFLSDESFGLYPREQ------------LIVIATG--SQGEPRSALA 310 + G +D+ D++F Q +I+ A+G + G S L Sbjct: 286 LYKKYGDQHRLQDKDIFDDKNFHYIREHQQSRTLDMLKNRAIIISASGMLTGGRILSHLF 345 Query: 311 -QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 +L + + + + G E ++ + + + A+ +S Sbjct: 346 KRLGNKNDLLLMVGFQADGTRGRDILEGKESV------KIYGEEIPIKCHFAKID-GLSA 398 Query: 370 HPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPD 427 H +L Y + +HGE + K ++G V + LF Sbjct: 399 HADQTELLDWYARFEEALKFTFLVHGEVEAMKTLKIELEEKGAKNVFIPDYMESFELFSG 458 >gi|261210444|ref|ZP_05924738.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC341] gi|260840502|gb|EEX67068.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC341] Length = 403 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 38/207 (18%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE-----RVSKKIPC- 120 L + +THAH DH G L L + P+Y + L+ +S K Sbjct: 15 LNGLVLTHAHIDHIGRLPWLLAAGFKQPIYCTAATAELVPLMLEDGLKLQLGMSPKQSER 74 Query: 121 ---------ISFQAGDKVDVGA-----FSIESVRVNHSIPETMALVIRSP-VGNIVHTGD 165 V F + H I + + IR P +V +GD Sbjct: 75 VLTEVRRLLRVQDYQKWFAVQPKRADSFWVRFQPAGH-ILGSAYVEIRRPNGDVVVFSGD 133 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA- 224 +L D + L ++T ++ + + + + +++ + Sbjct: 134 LGPSHTPLLPDPQSPER--------ADYLFIETTYGDKQHEDVQSR--GQRLRAMIERSL 183 Query: 225 --KGCVLVTTFSSSVSRIRSIIDIAEQ 249 G +L+ FS V R + ++ EQ Sbjct: 184 TDGGAILIPAFS--VGRTQELLFDIEQ 208 >gi|197302590|ref|ZP_03167645.1| hypothetical protein RUMLAC_01319 [Ruminococcus lactaris ATCC 29176] gi|197298488|gb|EDY33033.1| hypothetical protein RUMLAC_01319 [Ruminococcus lactaris ATCC 29176] Length = 534 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 72/471 (15%), Positives = 140/471 (29%), Gaps = 90/471 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + + ++ K I+IDCG+ D + PG L P Sbjct: 1 MKLTFV--GAAHEVTGSC----HFLQTAGKNILIDCGMEQGPDLYENPG--LPIP----- 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +F+THAH DH G L L ++ + L ++ Sbjct: 48 ---ANEVDYVFLTHAHIDHSGMLPRLAKDGFKGQIFTTYATADLCNIMLRDSAHIQEFEA 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETM-------------------------ALVIRS 155 ++ G E V V + + ++ S Sbjct: 105 -EWRNRKGKRAGQPEYEPVYVMQDALDAIELLVPCQYGERIRICEGVEIRFTDVGHLLGS 163 Query: 156 PVGNIVHTGDWKLDD--DAILGDVTDKDSLCAIG-NEGILALMCDSTNAMREGTCISEKG 212 + T D + TD+ + E ++ +ST R Sbjct: 164 ASIEVWATEDGVTKKIVFSGDIGNTDQPIIKDPAYTENADYIVMESTYGNRVHAQEKPDY 223 Query: 213 IKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLLGSSLKRVVSVAI 269 + I + KG V++ +F+ V R + ++ +I + ++ + + + Sbjct: 224 LGDFTRILKETFDRKGNVVIPSFA--VGRTQEMLYFIREIKEKGLLSEYPDFEVYLDSPL 281 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTV 328 + K + + + E L ++ G L +S + + + EK V Sbjct: 282 AIEATKVFTKNMREC----FDEEALALVNAGINPLVFPGLHTAISSEDSKMINFIEKPKV 337 Query: 329 IFSSRAI--------------------------PGNEVAIGHIK----NRLVEQGVRVIA 358 I S+ + N + N + + Sbjct: 338 IISASGMCDAGRIRHHLKHNLWREECTILFVGYQANGTLGRRLLEGEKNVKLFGESIEVH 397 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKELALQ 407 E VSGH N L + + P Q + +HGE + + Sbjct: 398 ARIESLHGVSGHADMNGLLKWVKAFDPPIQRVFVVHGEDTVTEEFAKTVEE 448 >gi|291613346|ref|YP_003523503.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291583458|gb|ADE11116.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 79/263 (30%), Gaps = 44/263 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G I ++ Y + I+ID G L ++ Sbjct: 1 MRITTLGCNGSITGDLRTTCYMV---DEDILIDAGSGAGDLRL--------------EQA 43 Query: 66 KNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + A+F+TH+H DH L L + + VYA P I L ++ Sbjct: 44 IAIDAVFLTHSHLDHCAFLPMLADAAGSFRKTPLSVYALPETIATLRQHMFNNQLWPDYT 103 Query: 120 CISFQAGDKVDVGAF-----------SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + I ++ +HS+P +A + + + V++ D Sbjct: 104 MLPAPELPYIRFHPIRLGETAELDGRRITALPASHSVP-CIAYRVDNGTASWVYSADTT- 161 Query: 169 DDDAILGDVTDK-DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D L I N L + N G S + + + + Sbjct: 162 -------FCADFWQELNRIDNLRYLLIENTFRNDNAAGAQRSGHNTAELLAQGRRLLQRP 214 Query: 228 VLVTTFSSSVSRIRSIIDIAEQI 250 V + V ++ + Q Sbjct: 215 VELFIVHMEVGHEQATMREVLQA 237 >gi|73540844|ref|YP_295364.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ralstonia eutropha JMP134] gi|72118257|gb|AAZ60520.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ralstonia eutropha JMP134] Length = 452 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 74/457 (16%), Positives = 134/457 (29%), Gaps = 84/457 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F LG + + Y + +M+DCG+ F + + Sbjct: 1 MELQF--LGATDSVTGS----KYILDTGHSRVMVDCGL-FQGFKSL----RLRNWDPLPA 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYAS-----------PFAIGLLEAKRVY 111 + L A+ +THAH DH G L L V+ + P + L E Y Sbjct: 50 DPATLDAVILTHAHIDHSGYLPLLVRNGFRGTVFCTMGTAQLCGILLPDSAALAEEDAEY 109 Query: 112 ERVSKKIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMAL 151 + G E H I A+ Sbjct: 110 ANRKGFSRHRPALPLYTSADAGRALRRLEPKPFGTRFSLTPDIDAEFHHAGH-IIGAAAV 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 + + IV +GD + I+ + L+ +ST R Sbjct: 169 TLHAGGQRIVFSGDLGR-QNDIVMRPPEFIREA-------DCLLVESTYGNRIHPDEDPL 220 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL--------KR 263 + G +++ F+ V R ++++ + +L + Sbjct: 221 DAIAGVVGNTLGRGGTLVIPAFA--VGRTQALLYCLHR-----LLEERRMPDIPIYLNSP 273 Query: 264 VVSVAIDVGIIKKDQLFLSDESF--------GLYPREQLIVIATGSQGEPR---SALAQL 312 + A + + D+L + + + EQ + + + S +A Sbjct: 274 MAIDATQIFALHPDELRIDRAACAAACGLPIPVQSMEQSVWLNQDRAPKIILAGSGMATG 333 Query: 313 SRGEMRNVKLA--EKDTVIFSSRAIPGNE-VAIGHIKNRLVEQGVRVIAEDAECPVHV-S 368 R + T++ S PG A+ + L G V A +H S Sbjct: 334 GRVVHHLATFGRDPRCTILLSGFQAPGTRGAALAGGQRELRIHGKDVAIHAAVEQIHGMS 393 Query: 369 GHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 H N+L + P+ + +HGEP A ++ Sbjct: 394 AHADANELMTWLNGFQAPPRRVFIVHGEPDASDAMRQ 430 >gi|324993854|gb|EGC25773.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK405] Length = 266 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S + L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKINSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L ++ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYNLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G IES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|228918074|ref|ZP_04081602.1| hypothetical protein bthur0012_52700 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930468|ref|ZP_04093468.1| hypothetical protein bthur0010_51460 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936742|ref|ZP_04099533.1| hypothetical protein bthur0009_51770 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949184|ref|ZP_04111452.1| hypothetical protein bthur0007_53040 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094573|ref|ZP_04225640.1| hypothetical protein bcere0021_52760 [Bacillus cereus Rock3-42] gi|229124965|ref|ZP_04254139.1| hypothetical protein bcere0016_52420 [Bacillus cereus 95/8201] gi|229187691|ref|ZP_04314827.1| hypothetical protein bcere0004_52220 [Bacillus cereus BGSC 6E1] gi|228595759|gb|EEK53443.1| hypothetical protein bcere0004_52220 [Bacillus cereus BGSC 6E1] gi|228658466|gb|EEL14132.1| hypothetical protein bcere0016_52420 [Bacillus cereus 95/8201] gi|228688820|gb|EEL42651.1| hypothetical protein bcere0021_52760 [Bacillus cereus Rock3-42] gi|228810467|gb|EEM56820.1| hypothetical protein bthur0007_53040 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822951|gb|EEM68792.1| hypothetical protein bthur0009_51770 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829187|gb|EEM74824.1| hypothetical protein bthur0010_51460 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841554|gb|EEM86670.1| hypothetical protein bthur0012_52700 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|228988689|ref|ZP_04148775.1| hypothetical protein bthur0001_53440 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229159022|ref|ZP_04287078.1| hypothetical protein bcere0010_51930 [Bacillus cereus ATCC 4342] gi|228624441|gb|EEK81212.1| hypothetical protein bcere0010_51930 [Bacillus cereus ATCC 4342] gi|228771140|gb|EEM19620.1| hypothetical protein bthur0001_53440 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWSAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|217969351|ref|YP_002354585.1| beta-lactamase [Thauera sp. MZ1T] gi|217506678|gb|ACK53689.1| beta-lactamase domain protein [Thauera sp. MZ1T] Length = 259 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 60/179 (33%), Gaps = 36/179 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L LG G IG A S I+IDCG L Sbjct: 5 MKLKV--LGCSGGIGG--AQPRTTSFLLDDDILIDCGTGVGDLTL--------------D 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 E + +F+THAH DH AL + V V+A+P I +L + V Sbjct: 47 ELARIDHVFLTHAHLDHIAALPLMIDSVGELRQAPVQVHATPETIRILHSHIFNWLVWPD 106 Query: 118 IPCISFQAGDKVDVGAFSI-----------ESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I + + ++ H++P +A + S G +V +GD Sbjct: 107 FSAIPDHHQPFMRFHPIHVGERRDCGGRGITALPARHTVP-AVAYRLDSAHGQLVFSGD 164 >gi|229035120|ref|ZP_04189066.1| hypothetical protein bcere0028_51460 [Bacillus cereus AH1271] gi|229142211|ref|ZP_04270735.1| hypothetical protein bcere0013_52960 [Bacillus cereus BDRD-ST26] gi|229176137|ref|ZP_04303630.1| hypothetical protein bcere0006_52050 [Bacillus cereus MM3] gi|229199591|ref|ZP_04326252.1| hypothetical protein bcere0001_50890 [Bacillus cereus m1293] gi|228583996|gb|EEK42153.1| hypothetical protein bcere0001_50890 [Bacillus cereus m1293] gi|228607372|gb|EEK64701.1| hypothetical protein bcere0006_52050 [Bacillus cereus MM3] gi|228641229|gb|EEK97536.1| hypothetical protein bcere0013_52960 [Bacillus cereus BDRD-ST26] gi|228728186|gb|EEL79216.1| hypothetical protein bcere0028_51460 [Bacillus cereus AH1271] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|325661249|ref|ZP_08149876.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|331084995|ref|ZP_08334082.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472756|gb|EGC75967.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408695|gb|EGG88160.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 265 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 13/164 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S ++ID G+ ++ + + + + L I +TH H Sbjct: 12 GNCIYVG----SDHTHLLIDTGI-----SKKRIEEGLKN---LEIKGEELDGILLTHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +PVYA+P I + + K +G S+E+ Sbjct: 60 DHIQGLGVFSRKYEIPVYATPGTIRGVREYKKL-GEIPDGLFHEIDVDQKFTLGDLSVEA 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++H E I ++ D + D+ + + + D+ Sbjct: 119 FAISHDANEPSGYRIEQGGQSVAVATDLGIYDEYTVSKLQNLDA 162 >gi|294507971|ref|YP_003572029.1| Metallo-beta-lactamase superfamily [Salinibacter ruber M8] gi|294344299|emb|CBH25077.1| Metallo-beta-lactamase superfamily [Salinibacter ruber M8] Length = 464 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 70/459 (15%), Positives = 133/459 (28%), Gaps = 66/459 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FL LG IG + + + I +D G G D P ++ Sbjct: 1 MKFLALGDTDGIGASC----HFLDLNGSGIALDAGT---DPQRDGPDS-LPRFDWVGDRA 52 Query: 66 KN-LMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLE------AKRVYERVSKK 117 + + +THAH DH G+L L H + + LL+ A+ +R + Sbjct: 53 DSYVDHTLVTHAHHDHMGSLPVLVRRFPHAMAHMTDATKKLLDILLPASARLQEKRRDRG 112 Query: 118 IPCIS-----------FQAGDKVDVG-AFSIESVRVNHSIPETMAL--VIRSPVGNIVHT 163 D+G F + + S+ I G + Sbjct: 113 ETTHEPLFTEDELEALHHLYLTHDLGQGFDLTGPKGQSSVTGRFFSAGHILGSAGVELQF 172 Query: 164 GDWKLDDDAILGDVTDKDSLCAIG----NEGILALMCDSTNAMREGTCISEK-----GIK 214 +W D T+ + I + L+ +ST + + + Sbjct: 173 EEWGRDRRVFYTSDTNMQAQTIIPGGEYPDSTDVLILESTQGAEPEAAATSRPEERDRFR 232 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVLLG--SSLKRV 264 K + ++ G L+ F + R + I+ + A I G ++ V Sbjct: 233 KTLSQVLARG-GTALIPVFV--MGRAQEILVLLGQLKREGAIPADVPIYTAGSMRAIAGV 289 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQ-----------LIVIATGSQGEPRSALA--- 310 + + P E ++V+++G EP + Sbjct: 290 YDDTRNTTPRVDASDEVYAVDQERVPYESEAKREILEGPGIMVVSSGMMIEPTLSNVLAR 349 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 ++ E V L +R + L + SGH Sbjct: 350 RMVENEDDAVLLVGHPAEGTPARRLQDAAAEENGAPVMLADGHGPQPVYCTVERFRFSGH 409 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEG 409 +L + + + P+ ++ IHG+P E + Sbjct: 410 SDRRELLSLVERMTPETVLLIHGDPDAKDWMAEHIKEAH 448 >gi|228905406|ref|ZP_04069361.1| hypothetical protein bthur0014_64710 [Bacillus thuringiensis IBL 4222] gi|228911301|ref|ZP_04075105.1| hypothetical protein bthur0013_54390 [Bacillus thuringiensis IBL 200] gi|228924206|ref|ZP_04087477.1| hypothetical protein bthur0011_51770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961725|ref|ZP_04123329.1| hypothetical protein bthur0005_51630 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228968611|ref|ZP_04129596.1| hypothetical protein bthur0004_53830 [Bacillus thuringiensis serovar sotto str. T04001] gi|229051131|ref|ZP_04194675.1| hypothetical protein bcere0027_50820 [Bacillus cereus AH676] gi|229072927|ref|ZP_04206123.1| hypothetical protein bcere0025_50870 [Bacillus cereus F65185] gi|229112875|ref|ZP_04242406.1| hypothetical protein bcere0018_51120 [Bacillus cereus Rock1-15] gi|229130708|ref|ZP_04259661.1| hypothetical protein bcere0015_51390 [Bacillus cereus BDRD-Cer4] gi|229153620|ref|ZP_04281797.1| hypothetical protein bcere0011_51490 [Bacillus cereus m1550] gi|229181708|ref|ZP_04309031.1| hypothetical protein bcere0005_50470 [Bacillus cereus 172560W] gi|229193713|ref|ZP_04320654.1| hypothetical protein bcere0002_53560 [Bacillus cereus ATCC 10876] gi|228589738|gb|EEK47616.1| hypothetical protein bcere0002_53560 [Bacillus cereus ATCC 10876] gi|228601741|gb|EEK59239.1| hypothetical protein bcere0005_50470 [Bacillus cereus 172560W] gi|228629849|gb|EEK86501.1| hypothetical protein bcere0011_51490 [Bacillus cereus m1550] gi|228652725|gb|EEL08610.1| hypothetical protein bcere0015_51390 [Bacillus cereus BDRD-Cer4] gi|228670554|gb|EEL25867.1| hypothetical protein bcere0018_51120 [Bacillus cereus Rock1-15] gi|228710173|gb|EEL62151.1| hypothetical protein bcere0025_50870 [Bacillus cereus F65185] gi|228722194|gb|EEL73595.1| hypothetical protein bcere0027_50820 [Bacillus cereus AH676] gi|228791103|gb|EEM38720.1| hypothetical protein bthur0004_53830 [Bacillus thuringiensis serovar sotto str. T04001] gi|228797960|gb|EEM44969.1| hypothetical protein bthur0005_51630 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835424|gb|EEM80794.1| hypothetical protein bthur0011_51770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228848319|gb|EEM93169.1| hypothetical protein bthur0013_54390 [Bacillus thuringiensis IBL 200] gi|228854226|gb|EEM98929.1| hypothetical protein bthur0014_64710 [Bacillus thuringiensis IBL 4222] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|319650112|ref|ZP_08004261.1| hypothetical protein HMPREF1013_00866 [Bacillus sp. 2_A_57_CT2] gi|317398293|gb|EFV78982.1| hypothetical protein HMPREF1013_00866 [Bacillus sp. 2_A_57_CT2] Length = 247 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 24/154 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N G + I++D GV+ K + +++ Sbjct: 1 MKIDILASGS----GGNCIALRSGETT----ILVDAGVAKTKIEKRLLEVGI-------- 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ AIFITHAH DH L L + +PVYA E + + +F Sbjct: 45 RPDSIRAIFITHAHSDHVKGLP-LANKYKIPVYA-------AEGEWKDIQGVDDDLQRAF 96 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 +AG+ +++ + IES + +H + + V+ Sbjct: 97 KAGEDINLDDYFIESFKTHHDAMDPVGYVVHGHD 130 >gi|197118715|ref|YP_002139142.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197088075|gb|ACH39346.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 257 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 14/137 (10%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + ++ID G+S + ++ I + L I ITH H DH + Sbjct: 18 ETDGCRLLIDAGLSGRET--------IARLSSIGVDAATLDGILITHEHTDHIRGVGATA 69 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 L +PV S + V ++ + F+ G SI+ V H + Sbjct: 70 RRLKLPVLGSARTLQAAR------HVIGRVDYVEFEPGTSFVFKGVSIDPFPVTHDACDP 123 Query: 149 MALVIRSPVGNIVHTGD 165 + I S G I D Sbjct: 124 VGYRIESGEGGIGFATD 140 >gi|332981983|ref|YP_004463424.1| RNA-metabolising metallo-beta-lactamase [Mahella australiensis 50-1 BON] gi|332699661|gb|AEE96602.1| RNA-metabolising metallo-beta-lactamase [Mahella australiensis 50-1 BON] Length = 463 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 65/484 (13%), Positives = 136/484 (28%), Gaps = 87/484 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + +++DCG+ + + + ++ Sbjct: 1 MKVTFLGAARMVTGSCYLLE----NKNIKVLVDCGMFQGGKEEEKNNFMEFPVS-----L 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 ++ + +THAH DH G + L + ++ + L Sbjct: 52 SDIDYLLLTHAHIDHSGRIPLLCKRGFKGKILSTKATVDLCSIMLPDSAHIQEMEAEWAT 111 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALV 152 +A R + + ++ S+ H I + + Sbjct: 112 RKAMRAGRPPVEPLYTVADAEYAMQFFEPVPYNNTIRLSDDISVRFQDAGH-ILGSAVIE 170 Query: 153 IRSPVGNI--VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 I + NI V +GD + I+ D + + + +ST R Sbjct: 171 IWNAEDNIKLVFSGDLGNRNQPIIKDPSFI--------DDADYVFVESTYGDRLHQDRPH 222 Query: 211 KGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIR-------SIIDIAEQIGRKIVLLGSS 260 + ++DI++N G V++ F+ V R + +I+ + + + Sbjct: 223 R--AHMLWDIIQNTFSKGGNVIIPAFA--VGRTQELLYELNMVIEDNKAKNIPVYIDSPL 278 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYP-----------REQLIVIATGSQGEPRSAL 309 + + D L S G P E+ + + A Sbjct: 279 AIKATEIFKHDVHEYYDSDALKLLSSGDDPLDFPGLDFTLTAEESKQLNFLNHSAVIIAA 338 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI---GHIKNRLVEQGVRVIAEDAECPVH 366 + + L SS G + A I + + + ++ Sbjct: 339 SGMCDAGRIKHHLKHNLWRPESSVVFVGYQAAGTLGRRILDGAKMVKIFGEDIAVKAHIY 398 Query: 367 ----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 S H N L + + P+ + IHGE E G+ Sbjct: 399 SIDSFSAHADKNGLIDWMRHFKNKPKQVFVIHGEDDVAPVFATTLNSEFDMPTTVPYLGQ 458 Query: 421 MLRL 424 + L Sbjct: 459 VYEL 462 >gi|330720832|gb|EGG99033.1| Metallo-beta-lactamase family protein2C RNA-specific [gamma proteobacterium IMCC2047] Length = 451 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 76/289 (26%), Gaps = 66/289 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE- 64 + LGG + + L + I++DCG+ ++ + Sbjct: 1 MKITFLGGTETVTGSKYLVE----TKNTRILVDCGLYQG-------------YKWLRRRN 43 Query: 65 -------RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------- 105 L A+ +THAH DH G + L+ PV+ L Sbjct: 44 WQPLPFDIGKLDAVLLTHAHLDHSGYIPALFKQGFRGPVFTHHATKDLCAILLADSGHIQ 103 Query: 106 --------EAKRVYERVSKKIPCISFQAGDK-----------VDVGAFSIESVRVNHSIP 146 + K + + + +G H I Sbjct: 104 EDDAKFYKKYKLSKHENPQPLYDRATAESSMELFEAVEFDERFSIGDIEAHLQSAGH-IL 162 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++++ + + +GD D + L+ +ST R Sbjct: 163 GAASIILEAEGKRVGFSGDVG--------RPDDIFMKPPKPLPELDLLLLESTYGNRRHD 214 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTF-SSSVSRIRSIIDIAEQIGRKI 254 ++ G +L+ +F S ++ + GR Sbjct: 215 QTDPFEQLADVVKTTAKKGGVLLIPSFAVSRAQTLQHMFATLIAEGRIP 263 >gi|15618788|ref|NP_225074.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|15836412|ref|NP_300936.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|16752160|ref|NP_445527.1| hypothetical protein CP0990 [Chlamydophila pneumoniae AR39] gi|33242239|ref|NP_877180.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|4377197|gb|AAD19017.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|7189904|gb|AAF38769.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979253|dbj|BAA99087.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|33236750|gb|AAP98837.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|269302665|gb|ACZ32765.1| metallo-beta-lactamase family protein [Chlamydophila pneumoniae LPCoLN] Length = 265 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 23/174 (13%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS--FPKDDLPGVDLVFPDITFIMKER 65 F PL G G + L + I+ID GVS +L +++ + Sbjct: 4 FFPL-ASGSKGNSAYL-----GTDSCKILIDLGVSKQVVTRELLSMNI----------DP 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ AIF+TH H DH + + P+ + L F Sbjct: 48 EDIQAIFVTHEHSDHISGIKSFVKAYNTPIVCNLETARALCHLLDSH-----PEFKIFST 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G +++ V H + +A + + D I ++ D Sbjct: 103 GSSFCFQDLEVQTFNVPHDAVDPVAFIFHYREEKLGFCTDLGWVTSWITHELYD 156 >gi|305667455|ref|YP_003863742.1| hypothetical protein FB2170_14448 [Maribacter sp. HTCC2170] gi|88709503|gb|EAR01736.1| hypothetical protein FB2170_14448 [Maribacter sp. HTCC2170] Length = 456 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 60/482 (12%), Positives = 133/482 (27%), Gaps = 90/482 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G + + + + +MIDCG F P + Sbjct: 2 NKVKIHFLGAAGTVTGS----KFYLETPELNLMIDCG-MFQGLKELREFNWLP----LPI 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 + + + +TH H DH G L L + + + + Sbjct: 53 DANKIDMVLLTHGHLDHTGYLPRLVKEGFKGQILGTAPTLAITSIILKDSAKIHEEEAEK 112 Query: 112 --------ERVSKKIPCISFQAGDKVDVGAFSIESVRV-----------NHSIPETMALV 152 R + + + N I + Sbjct: 113 ANKEGYSKHRPALPFYTAEDAKEAIRLFESIEKDVWITLSTNIKYRSVFNGHIIGATFIE 172 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + V +GD D L + L +ST + Sbjct: 173 LDIFGKRFVFSGDIG--------RSDDILLLPPKRPKWADYLFIESTYGNKNHPEEKVAT 224 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIR------SIIDIAEQIGRKIVLLGSSLKRVV- 265 + + + +G +++ +F+ V R++ ++ +I + + S + V Sbjct: 225 KLTTLVNKTIHDRGNLIIPSFA--VERLQSLMYQLWLLYKKNKIPNIPIFVDSPMGNNVL 282 Query: 266 ----------SVAIDVGIIKKDQLFLSDE-----SFGLYPREQLIVIATG--SQGEPRSA 308 +++ + + + PR ++++ +G + G + Sbjct: 283 SVFEHFPDWHKLSMKEYYAICEHITIISSYKETWETIDDPRPKIVIAGSGMVTGGRVLTY 342 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV--- 365 L QL +V V + + G + E + + + Sbjct: 343 LKQLV-----DVSSTNVLLVGYQAEGTRG-----RRLLEGAHEIKLFGKYYPVKAQIAHL 392 Query: 366 -HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 +S H +L I+ P+ + +HGEP L A + E V + + + Sbjct: 393 ESLSAHADQAELLHWLSDIKNVPEQIFLVHGEPTSLDAFRSKISDEHNWNVKIPKLFEQV 452 Query: 423 RL 424 + Sbjct: 453 EV 454 >gi|254478890|ref|ZP_05092253.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035156|gb|EEB75867.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] Length = 541 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 90/284 (31%), Gaps = 62/284 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L + ++DCG+ + V+ FI + Sbjct: 1 MKITFLGAAKEVTGSCYLV----KTENARFLVDCGMFQGGE----VEDELNYQEFIFDIK 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERV---------- 114 + + +THAH DH G + L+ +YA+ + L Sbjct: 53 D-IDFVLLTHAHIDHSGRIPVLYKRGYRKRIYATHATVDLCRYMLPDSGHIQEMESEWKN 111 Query: 115 ---------SKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 + + +A + + + + H + + + Sbjct: 112 RKRKRAGKPLRDPLYTAEEAEESISIFYGVDYGEVIEPAPHIKVRFNDAGH-MLGSSIIE 170 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + IV +GD +L DVT ++C+ST R + Sbjct: 171 VWVNEKGKETKIVFSGDLGNKKVPLLRDVT--------PINEADYVLCESTYGNRIHEEV 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ K + +I+ G V++ +F+ V R + I+ + Sbjct: 223 GDR--AKRLMEIITRTIKRGGNVIIPSFA--VGRTQEILYELHK 262 >gi|152981637|ref|YP_001352974.1| metallo-beta-lactamase superfamily protein [Janthinobacterium sp. Marseille] gi|151281714|gb|ABR90124.1| metallo-beta-lactamase superfamily protein [Janthinobacterium sp. Marseille] Length = 259 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 76/238 (31%), Gaps = 28/238 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S S+R +M+DCG + + + + Sbjct: 1 MKFASLGSGSE--GNALLISTQSGSTRTTLMLDCGFGIKETER--------RLARLQMLP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L I +TH H+DH G + +PV+ + + K + + Sbjct: 51 TDLSGIIVTHEHQDHVGGVFKFARRHKLPVWLTYGTYQAVHDKC------DGVQLHFCRD 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++ +G + V H E + V + D ++ A Sbjct: 105 NERFAIGDLELLPYTVPHDAREPVQYVASDGTRRLGVLTDAGHGTAHMV---------AA 155 Query: 186 IGNEGILALMCDSTN---AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 +G L L C+ ++ I + +A G +L S + RI Sbjct: 156 LGGCDALMLECNHDRQMLVNSTYPPSLKQRIGGEYGHLSNHAAGEILAALDKSRLQRI 213 >gi|125559879|gb|EAZ05327.1| hypothetical protein OsI_27531 [Oryza sativa Indica Group] Length = 663 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 68/468 (14%), Positives = 143/468 (30%), Gaps = 60/468 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV- 129 F+THAH DH + + +V VYAS I + + + A V Sbjct: 27 FLTHAHRDHIAGI----TATNVAAVYASRLTILIARHIFPQLDRADAFVEVELGAPVLVP 82 Query: 130 -DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 G F++ + NH P + + + G ++HTGD +L D L A Sbjct: 83 DPDGDFTVTAFDANH-CPGAVMFLFEGASFGRVLHTGDCRL--------TPDFRFLAA-- 131 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 + D T A S+ + + + + +V S + + +++++ Sbjct: 132 ----DYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHPNAPVVYLVSDMLGQEEILMEVS 187 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + G KI + + + ++ E + VI E + Sbjct: 188 KVFGSKI-YVDRDKNSECYHTLSL---------VAPEILTDNSSSRFQVIGFPRLSERAT 237 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 + L+R + + +I +S R + E V Sbjct: 238 EMLALARAKH-----QPEPLIIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVWHVCF 292 Query: 368 SGHPYPNDLKRMYQWIRPQVLV-----AIHGEPLHLVAHKELALQEGIACVP-PVRNGKM 421 S H +L++ ++I+P+ ++ + E ++ H + + +R Sbjct: 293 SMHSSREELEQALRFIQPKWVISTTPPCMAIELSYVKKHCFASRLRNDDPLWKLLRLSDG 352 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + V ++ + D + ++ + + I Sbjct: 353 NSAVSGSPLAVPTVEMIKKCEEEEVTCSVKDSFSSDGIRMRDQ---EPTL---EDFEINV 406 Query: 482 VPEIVDIGI--------PAYDGDGGKI--HKLLLKTVITTVVDLPQFR 519 P + GI P D + L V + + Q++ Sbjct: 407 EPPVTLFGIARFGLTEEPELWKDEHESVEIDELKVQVENSATECEQWK 454 >gi|228942611|ref|ZP_04105143.1| hypothetical protein bthur0008_52380 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975541|ref|ZP_04136093.1| hypothetical protein bthur0003_52850 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982177|ref|ZP_04142466.1| hypothetical protein bthur0002_53310 [Bacillus thuringiensis Bt407] gi|228777529|gb|EEM25807.1| hypothetical protein bthur0002_53310 [Bacillus thuringiensis Bt407] gi|228784151|gb|EEM32178.1| hypothetical protein bthur0003_52850 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817037|gb|EEM63130.1| hypothetical protein bthur0008_52380 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDLKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|229148012|ref|ZP_04276351.1| hypothetical protein bcere0012_51330 [Bacillus cereus BDRD-ST24] gi|228635437|gb|EEK91928.1| hypothetical protein bcere0012_51330 [Bacillus cereus BDRD-ST24] Length = 249 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFIFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNKNRKLALITDTGY 133 >gi|309781245|ref|ZP_07675982.1| metallo-beta-lactamase superfamily protein [Ralstonia sp. 5_7_47FAA] gi|308920066|gb|EFP65726.1| metallo-beta-lactamase superfamily protein [Ralstonia sp. 5_7_47FAA] Length = 261 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 14/162 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F LG E N L S ++ I++DCG G+ + + Sbjct: 1 MTLRFASLGSGSE--GNALLVESASGATCTRILLDCG--------FGIRETVRRLERLGC 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++L AI +TH H DH G+ + + + +PV+ S R + + Sbjct: 51 TPESLNAILVTHEHSDHVGSAYAVAAKFDIPVWTSHGTY----RATENLRGADRAAVRFC 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +A D VG I V H E + V + D Sbjct: 107 RADDMFCVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTD 148 >gi|109898067|ref|YP_661322.1| RNA-metabolising metallo-beta-lactamase [Pseudoalteromonas atlantica T6c] gi|109700348|gb|ABG40268.1| RNA-metabolising metallo-beta-lactamase [Pseudoalteromonas atlantica T6c] Length = 467 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 9/106 (8%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 + G E+ + L S I++DCG+ +D D F Sbjct: 3 IIYFWGAAQEVTGSCHLIESASFGK---ILLDCGMHQGGSS---IDR-IGDEGFPF-NPA 54 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 ++ A+ ++HAH DH G L L P+Y + LL Sbjct: 55 SIDAVLLSHAHLDHSGMLPKLVHDGFTGPIYCTSETADLLVVMLQD 100 >gi|269837215|ref|YP_003319443.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786478|gb|ACZ38621.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 272 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 24/147 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----PKDDLPGVDLVFPDITFIMKERKNL 68 G G G N L P+ ++ID G+ GV PD L Sbjct: 7 GSGSSG-NALLIQTEGPAGTTSVLIDAGIPVRRLRAGLAAAGV----PD--------DGL 53 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 AI ++H H DH AL L + P++A+ + L ++ Sbjct: 54 DAILVSHEHHDHISALPRLVRYQRCPIFATSGTMRAL-------DIAPSDRWERLVPEHS 106 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRS 155 +G+ +I + V H E + + Sbjct: 107 CRIGSLTITPISVPHDAAEPVGFYVDD 133 >gi|110833639|ref|YP_692498.1| metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] gi|110646750|emb|CAL16226.1| metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] Length = 257 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 77/233 (33%), Gaps = 27/233 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITFIMKERKNLMAI 71 G G G N L + +++DCG + + ++ G + D L AI Sbjct: 7 GSGSKG-NATLVH----ADDTLVLVDCGFTIKETEVRLGQLGLVAD---------QLSAI 52 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 +TH H DH + L + PVY+S + KR K+ + G + Sbjct: 53 LVTHEHGDHIRSAGALARKVGCPVYSSFGTASAVHDKRAS---LKEANWQEIRPGRTFTL 109 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 GA + V V H E + D ++ D D+L N Sbjct: 110 GAMEVLPVLVPHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDALVLECNHDS 169 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 L ++ + + + + +L ++V R++ ++ Sbjct: 170 QLLASG------PYPASLKRRVGGMLGHLSNDQAAALL---RQANVDRLQHLV 213 >gi|313203413|ref|YP_004042070.1| metallO-beta-lactamase superfamily hydrolase [Paludibacter propionicigenes WB4] gi|312442729|gb|ADQ79085.1| metallo-beta-lactamase superfamily hydrolase [Paludibacter propionicigenes WB4] Length = 267 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 19/193 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++L F G G G N G S ++ID G+ GV + ++ + Sbjct: 2 DKLRFQSFG-SGSSG-NCYFIGNASNG----LLIDAGL--------GVRSIRKNLRNMGL 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-EAKRVYERVSKKIPCIS 122 + +N+ +F+TH H DH A+ + VP+Y + + + V E++ I Sbjct: 48 DFENIWGVFVTHDHADHIKAVGPIGEKHRVPIYTTRKVHEGIQRSYCVTEKLYSSRKYIE 107 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDK 180 + ++VG F + + V+H + + + D + ++ A +D Sbjct: 108 KN--ETIEVGEFKVTAFPVSHDATDNVGYTVEYKEKRFTFATDLGFVSEEVAEHLSKSDY 165 Query: 181 DSLCAIGNEGILA 193 L A +E +L Sbjct: 166 MVLEANYDEQMLM 178 >gi|329769320|ref|ZP_08260736.1| hypothetical protein HMPREF0433_00500 [Gemella sanguinis M325] gi|328839123|gb|EGF88708.1| hypothetical protein HMPREF0433_00500 [Gemella sanguinis M325] Length = 271 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 18/213 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++D G++ + ++ I ++ K++ AIF+TH H DH + Sbjct: 14 SIYLEHNNFKCLVDAGLT--------GKKITENLAQIERDIKDINAIFVTHEHIDHIKGI 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L ++PVYA+ K F+ + + S V+H Sbjct: 66 GVLARKYNIPVYANKLTWD----NMQKVGEIKTDLKFHFEKEESKIFDDVVVNSFGVSHD 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL--CAIGNEGILAL----MCDS 198 + D D ++ V D ++ + E +L Sbjct: 122 AANPQFYTFECEGKRVSILTDTGYVSDKMIDYVKDSHTIVYESNHEENVLLSGPYPWVTK 181 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + I+ + V + Sbjct: 182 QRILSDKGHLSNNDSANYLTKIVGDNTKNVFLA 214 >gi|225849395|ref|YP_002729559.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643204|gb|ACN98254.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 463 Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 85/284 (29%), Gaps = 61/284 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 ++ GG + + L I+IDCG+ D+ + Sbjct: 1 MIVQSFGGSEGVTGSCHLV----KVDHMNILIDCGMFQGLDEDK-------NYEPFGFNP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA----------------------- 101 K + + +THAH DH G + L + ++ Sbjct: 50 KEIDYLILTHAHIDHCGRIPLLVKQGFRGKIISTRPTYAVARIMLLDAAKVMGEEYKVNY 109 Query: 102 -IGLLEAKRVYERVSKKIPCISFQAGDKVDV-----------GAFSIESVRVNHSIPETM 149 L + K + F++ + V + H I + Sbjct: 110 KKALRKGKPEEAKPPLYDEDDVFESMEYFKVLLDYNEKYKLSKNVEVVFRNAGH-ILGSA 168 Query: 150 ALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + I+ +GD D D ++ D +G L +ST R Sbjct: 169 YVELTVRENFNTKKIIFSGDLGTD-DKLVIKPIDY-------PKGADVLFIESTYGNRNH 220 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ I++ I+++ K + + ++ R + I+ I + Sbjct: 221 R-PLDQTIEEFKAAIIESFKDGGNIVIPTFALERAQEILFILRK 263 >gi|188996784|ref|YP_001931035.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931851|gb|ACD66481.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 464 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 65/479 (13%), Positives = 133/479 (27%), Gaps = 86/479 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 ++ GGV + + L G + +IDCG+ D+ + Sbjct: 1 MIVKSFGGVEGVTGSCHLVNVGHLN----FLIDCGMFQGIDEDK-------NYEPFGFNP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 + + +THAH DH G + L + ++ L +V+ Sbjct: 50 AKIDYLILTHAHIDHIGRVPLLVKQGFKGKIISTRATYALARIMLLDAVKVMSEEYKVNY 109 Query: 117 KIPCISFQAGDKVDV---------------------------GAFSIESVRVNHSIPETM 149 K + + V +I H I + Sbjct: 110 KKALRRGKPEEVKPVLYDEDDVFQAMEHFKIFLEYDESYKLSKDVTITFRNAGH-ILGSA 168 Query: 150 ALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + ++ +GD ++ ++ + + + +ST R+ Sbjct: 169 YVELLVNDEGRSKKVIFSGDLGT-NNKLVIREINY-------PQDADFIFIESTYGDRKH 220 Query: 206 TCISEKGIKKNIYDIMKNAK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + E I + I+++ K G V++ TF+ ++ I ++ L Sbjct: 221 RPLPE-TINEFKTAIIESFKDGGNVVIPTFALERAQEILFILRTMYDNGELPPCKIFLDS 279 Query: 264 VVSVAIDVGIIKKD----QLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------- 309 +++A ++ L P V T S E R Sbjct: 280 PLTIAATKLFLQFPNQLNGEVLKLLKQNKNPFVFPWVYFTESVEESRKINEIESGAIILA 339 Query: 310 -AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPV 365 + + G L SS G + I + + + + Sbjct: 340 GSGMCTGGRIKHHLKHNLWRENSSVIFVGYQAEGTLGRQIIDGAKYVKIYGEEIAVKAKI 399 Query: 366 HV----SGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + S H +L + + + + IHGEP KE + V+ Sbjct: 400 YTINGFSAHADQENLLDFIKQTKGVETVFLIHGEPKIQEIFKEKIKETLNLPTHIVKRH 458 >gi|57234162|ref|YP_181776.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] gi|57224610|gb|AAW39667.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] Length = 468 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 69/461 (14%), Positives = 145/461 (31%), Gaps = 94/461 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG N+ Y + +++DCG+ + + L D + Sbjct: 3 IEIQFLGAA----RNVTGSRYLIKTDHTQLLVDCGL-YQERRLQ--DR---NWQPFEIPP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA------KRVYERVSKKI 118 ++L A+ I+HAH DH G L L PV+A+ + K E + K Sbjct: 53 QSLSAVIISHAHIDHCGLLPKLVKEGFAGPVFATEATAEIARISLTDAGKLQEEDAAFKK 112 Query: 119 PCISFQ-----------------------------AGDKVDVGAFSIESVRVNHSIPETM 149 + + + + H + + Sbjct: 113 KRHEREGRKTKYPEIPLYTAEDARAVSPLFKTVEYSREIAVTEDITATFHNAGH-VFGSA 171 Query: 150 ALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 ++ ++ + IV +GD + D + D + ++ +ST R Sbjct: 172 SIELKIQENHRQKVIVFSGDLG-NWDRPILKNPDLVNQA-------DYVVIESTYGDRTH 223 Query: 206 TCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI---GRKI---VLLG 258 I+E +K I + G +++ +F+ + R + ++ + G+ V + Sbjct: 224 QDINEASLKLAEIINQTVKLGGNIVIPSFA--LERTQDLLFFLNRFMSEGKIPSLKVFVD 281 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ------- 311 S + ++ D+ + G P E + T + ++ LA+ Sbjct: 282 SPMAISITKIFKEHPELYDRETSGWVNNGSSPFEFEGLHFTNKAADSKAILAEKDPCIII 341 Query: 312 -------LSRGEMRNVK--LAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDA 361 R + V + T++F G +G + + E + Sbjct: 342 AGSGMCTGGRIKHHLVNNISRPESTILFVGFQATG---TLGRLITDGAKEVRILGQHYPV 398 Query: 362 ECPV----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 + + S H L R + +P+++ HGEP Sbjct: 399 QARIEELRAFSAHADQPTLLRWLKGFKNKPEMVFVTHGEPE 439 >gi|292490825|ref|YP_003526264.1| RNA-metabolising metallo-beta-lactamase [Nitrosococcus halophilus Nc4] gi|291579420|gb|ADE13877.1| RNA-metabolising metallo-beta-lactamase [Nitrosococcus halophilus Nc4] Length = 470 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 68/433 (15%), Positives = 124/433 (28%), Gaps = 89/433 (20%) Query: 35 IMIDCGVSFPKDDLPG--------VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 ++IDCG+ + PG +D D++ + A+ +TH H DH G + Sbjct: 31 VLIDCGLFQGVEASPGGASRGALEIDF---DLSA-------VQALLVTHCHIDHVGRIPY 80 Query: 87 LWSF-LHVPVYASPFAI-------------------GLLEAKRV--YERVSKKIPCISFQ 124 L + +Y S L+ R+ + Sbjct: 81 LLAAGFEGKIYCSEPTAVLLPLVLEDAVKVGFTRNEELIRRFLEVLKSRIKPVAYGRWVK 140 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + + H + + T + D A + Sbjct: 141 IPGNRKAASLQVRFQPAGHILGSAYIECKVANGRQQATTVLFSGDLGAPYAPLLPAPKPA 200 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 G L+ +ST E+ + + I + +G VL+ FS + R + + Sbjct: 201 Y----GSDILIIESTYGDTLHEGRQERHAQLQAIIERCFRNRGMVLIPAFS--IGRTQEL 254 Query: 244 IDIAE----QIGRKIVLLG---SSLKRVVSVAIDVGI--------IKKDQLFLSDESFGL 288 + E + G + V G L+ VV + DQ + G Sbjct: 255 LYELEQVIYRFGDREVASGLRWRDLEIVVDSPLANRFTRVYRKLSKFWDQEAKRVKIQGR 314 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV-------------------- 328 +P + GS + + +A L+R V +A Sbjct: 315 HPLAFEQLTTIGSHEQHLATVAYLARSPRPTVVIAASGMCAGGRIVNYLKALVENPKTDI 374 Query: 329 ---IFSSRAIPGNEVAIGHIKNRLVEQGVRVIA--EDAECPVHVSGHPYPNDLKRMYQWI 383 + + PG + +N VE R S H DL + + Sbjct: 375 VLVGYQAAGTPGRAIQQYGPQNGYVELEGRRYTVNAQVHTLAGYSAHADQKDLLGFVRRM 434 Query: 384 --RPQVLVAIHGE 394 +P+ + +HGE Sbjct: 435 KKKPKEIRIVHGE 447 >gi|59710760|ref|YP_203536.1| right junction gene, LPS locus [Vibrio fischeri ES114] gi|59478861|gb|AAW84648.1| right junction gene, LPS locus [Vibrio fischeri ES114] Length = 490 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLM 69 GG + + + I+IDCG+ +D D G + DI F + + Sbjct: 22 GGKFGVTGSCHELRINHNGNNHGILIDCGLFQGRDAKDKNGNERKL-DIEFPIAH---IK 77 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 A+ +TH H DH G L L + P+Y +P L+ Sbjct: 78 ALILTHTHIDHIGRLPWLLAKGFKQPIYCTPATAELVPLMLDD 120 >gi|78777048|ref|YP_393363.1| Beta-lactamase-like [Sulfurimonas denitrificans DSM 1251] gi|78497588|gb|ABB44128.1| Beta-lactamase-like protein [Sulfurimonas denitrificans DSM 1251] Length = 197 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 25/165 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ P+G N + + +ID G+ ++++ Sbjct: 1 MKIKVQPMGDYQ---TNCYIVHVNNMD----FIIDPGMG--------------ATEWVIQ 39 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 N +AI TH H DH + +L L +P+Y + LL+ + I Sbjct: 40 NVTNPVAILNTHGHFDHVWSNAELQKRLKIPLYTPKEDLMLLKDSSWMPSLPPSYADIEV 99 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +A + D ++ P + I + +GD+ Sbjct: 100 EANQEFDFNGVKVKFRHFPGHTPGCSTIEIGDA----MFSGDFIF 140 >gi|332523150|ref|ZP_08399402.1| metallo-beta-lactamase domain protein [Streptococcus porcinus str. Jelinkova 176] gi|332314414|gb|EGJ27399.1| metallo-beta-lactamase domain protein [Streptococcus porcinus str. Jelinkova 176] Length = 270 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 11/170 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G++ K + I ++ ++L AI ITH H DH + Sbjct: 20 SFYLETPKKRILVDAGLTGKKITSLLAE--------IDRKPEDLDAILITHEHSDHIKGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L H+ +YA+ +++ + + ++ I F + G IES V+H Sbjct: 72 GVLARKYHLDIYANQKTWQIIDDRNMIGKIDSNQKYI-FDRDKVMTFGDLDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + V D + D + + D D + + + IL Sbjct: 131 AADPQFYRFMKDNKSFVMLTDTGYVSDRMSGIIDNADAYLIESNHDIEIL 180 >gi|228955713|ref|ZP_04117708.1| hypothetical protein bthur0006_50610 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803941|gb|EEM50565.1| hypothetical protein bthur0006_50610 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 249 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + K +++D G+S + ++ I +TH H DH L L Sbjct: 6 TDEKKLLVDAGLSGKATEAL--------FKQAELNINDVSGILVTHEHSDHIKGLGVLAR 57 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 58 KYDLPVYANEKTWNAMEHLI---GNIPTEQKFLFSVGDVKTFGDIEVESFGVSHDAAEPM 114 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + + D Sbjct: 115 FYAFHNNNRKLALITDTGY 133 >gi|255563435|ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223538070|gb|EEF39682.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 427 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 109/326 (33%), Gaps = 19/326 (5%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DH L W+ P++ S L A+ +S V Sbjct: 19 FLTHLHSDHTKGLTSAWAR--GPLFCSRLTANLFPARFPEFNLSLLCVLDIGVWHSLSVV 76 Query: 132 GA-----FSIESVRV-NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++ + + H P + L+ R G +++TGD++ + + G + L A Sbjct: 77 SPSSGSQTVLQVMPIDAHHCPGAVMLLFRGDFGCLLYTGDFRWEATSERGKIGSNMLLNA 136 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + ++ + L D+T + + DI+ + G ++ S + + ++ Sbjct: 137 LKDDSVDILYLDNTYCNPSFDFPPRHVAARQVVDIIASHPGHDIIIGIDS-LGKEDLLLH 195 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I+ + KI + L+ + +G S PR + + Sbjct: 196 ISRMLNIKIWVWPERLQTM----HLLGFHDIFTTKTSQTRVRAVPRYSFSINTLEELNKM 251 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIP--GNEVAIGHIKNRLVEQGVRVIA----E 359 + + G VK + D +F S N + + V + Sbjct: 252 HPTIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYKNGKLSANGGTGTDKLNGSVQSVERLH 311 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRP 385 V S H ++++ + ++P Sbjct: 312 QYIYSVPYSDHSCFSEIQEFIELVQP 337 >gi|312134552|ref|YP_004001890.1| beta-lactamase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774603|gb|ADQ04090.1| beta-lactamase domain protein [Caldicellulosiruptor owensensis OL] Length = 267 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 69/200 (34%), Gaps = 28/200 (14%) Query: 1 MKNEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 + ++E++F PL G G N L Y I++D GVSF K Sbjct: 2 IMSDEVLFCPLYSGSSG----NSILISY----KDTTIIVDAGVSFKKLAQ---------- 43 Query: 59 TFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + K K + AI ++H H DH + ++VP+ + ++ Sbjct: 44 -ALEKIGFNKKIDAILLSHDHSDHVKCAGIYFRKMNVPIITNYRTWEAIKNSL---GKVD 99 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAIL 174 + G +G+ I++ + H + M + I D D A Sbjct: 100 ESYVKLIDTGASFSIGSIGIDTFSIPHDASDPMGFCFYAKDRKISICTDVGHVSDSVASK 159 Query: 175 GDVTDKDSLCAIGNEGILAL 194 D +D L + + +L Sbjct: 160 IDFSDIILLESNHDIEMLLF 179 >gi|282877884|ref|ZP_06286693.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] gi|281299885|gb|EFA92245.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] Length = 283 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 16/194 (8%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + L F+ LG G G N Y + +MID G+ G+ L+ Sbjct: 15 SNMLKFICLG-SGSSG-NC----YCLFTENDGLMIDAGI--------GIRLLKRSFKEYG 60 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + I +TH H DH ++ + H+ VYA+ +E + Sbjct: 61 LSLSQIHHILVTHDHADHVKSVGAISLDYHLAVYATHLVHAGIERNYCVHKKVAPAYMEV 120 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVTDK 180 G +G F++ V H + + I D D+ + T+ Sbjct: 121 IDKGQPFQLGDFTVTPFGVPHDSSDNVGYKIECGNIVFTLMTDIGHVTDEMRAVISETNY 180 Query: 181 DSLCAIGNEGILAL 194 + A + +L Sbjct: 181 LVIEANHDPKMLMY 194 >gi|23100903|ref|NP_694370.1| hypothetical protein OB3448 [Oceanobacillus iheyensis HTE831] gi|22779137|dbj|BAC15404.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 261 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 69/212 (32%), Gaps = 17/212 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++ +++D G+S K D I + K L I +TH H DH L Sbjct: 17 FYIETEQQKMLVDAGLSGKKIDEL--------FQSIQVDPKQLDGILVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ A +F G +ES V+H Sbjct: 69 IVARKYQLPIYANEKTWN---AMDQSIGKIPLDQKFTFDMESVRSFGDLEVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M R + D + + + D A + G+L + Sbjct: 126 AEPMFYTFRHDGKKVALVTDLGYVSERIKKTVEDADAYIFEANHDVGMLRMGPYPWSVKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + + DI+ N + + Sbjct: 186 RILGDSGHVSNEDCGLALTDIISNRTKRIYLA 217 >gi|303328439|ref|ZP_07358876.1| metallo-beta-lactamase family protein [Desulfovibrio sp. 3_1_syn3] gi|302861433|gb|EFL84370.1| metallo-beta-lactamase family protein [Desulfovibrio sp. 3_1_syn3] Length = 536 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 12/108 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI-TFIMKE 64 + LG + + + K +DCG+ ++ DI ++ Sbjct: 1 MKVQFLGAAKTVTGSCYMIEAC----GKRFCVDCGMHQGNKA---IEQRNRDIKPYLPGN 53 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 + I ITHAH DH G L L PVY + LLE Sbjct: 54 ---IDFILITHAHIDHSGLLPLLVRDGFDKPVYCTKATSDLLEIMLQD 98 >gi|87241310|gb|ABD33168.1| DNA repair metallo-beta-lactamase [Medicago truncatula] Length = 511 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 107/326 (32%), Gaps = 38/326 (11%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L WS P+Y SP L++ + + Sbjct: 198 AYFLSHFHADHYGGLSKKWSH--GPIYCSPLTGRLVQMCL----YVNPSYICPLEFDTEY 251 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + + + NH P + P +HTGD++ + N Sbjct: 252 VIDGIKVTLIDANH-CPGAALIHFELPNGQCYLHTGDFRACKLMQDYHLF--------VN 302 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV---LVTTFSSSVSRIRSIID 245 + + L D+T + S+ + + I N LV + S+ + + Sbjct: 303 KRVNVLYLDTTYCNPKYKFPSKDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECVYLA 362 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I++ +G KI V+ + ++ D SD L V+ P Sbjct: 363 ISKALGVKI---------HVNASRRRILLAYDCPDYSDRLCTNGNNTLLHVL-------P 406 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 S+L ++ + E+ T + + R I N L V Sbjct: 407 MSSL-RIETLKEYLKTYKEQFTSVLAFRPTG--WTFSEKIGNDLALIKPVSNGNITTYGV 463 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+ Q++RP ++ Sbjct: 464 PYSEHSSFTELRDFVQFLRPDKIIPT 489 >gi|303245482|ref|ZP_07331766.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio fructosovorans JJ] gi|302493331|gb|EFL53193.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio fructosovorans JJ] Length = 535 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 67/520 (12%), Positives = 138/520 (26%), Gaps = 81/520 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LG G + + + G IDCG+ + ++ D Sbjct: 1 MKVKF--LGAAGTVTGSCHVIETG----NTRFAIDCGLHQGSES---IEDRNQDTDVYAP 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +THAH DH G L + +Y +P LL +++ Sbjct: 52 R--RMDFFIVTHAHMDHCGLLPRMVKTGFSGKIYCTPPTRDLLGIMLEDSAHIQEMEA-E 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSI-----------------PETMALVIRSPVGNIVHTG- 164 + + G +E++ P I G+I+ + Sbjct: 109 WASRKNRRHGGRQVEALYTRADAAATVDRLVAVPYGEPFSPTPGVTAIYHDAGHILGSAF 168 Query: 165 -DWKLDDDAILGDV---TDKDSLCAI----GNEGILA--LMCDSTNAMREGTCISEKGIK 214 + L+ + + D + + + A L + T R+ S + Sbjct: 169 IELSLEQNGTRTRMLFSGDLGRPSQLLVNDPAKPVDADYLFLEGTYGDRDHKNESAS--R 226 Query: 215 KNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAE---QIGRKIVLLG---------- 258 + + + + G V++ F+ V R + ++ + G+ + Sbjct: 227 DELAEAIAYSYSRGGKVIIPAFA--VERTQEVLYCLHLLLKEGKLPADMPVFVDSPLAIK 284 Query: 259 -----SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 + + A + + EQ I T + + + Sbjct: 285 ATEIFRRNPQYLDAAARAYYDRGEDPLSLPGLRFTQTTEQSREINTLQGPAVVISASGMC 344 Query: 314 RGEMRNVKLAEKDTVIFSSRAIPG---NEVAIGHIKNRLVEQGVRVIAEDAECPVHV--- 367 L SS G I + + V Sbjct: 345 NAGRIKHHLRHNLWRPESSVVFVGFQAMGTPGRRIVDGAKVIRLLGEEVAVSAKVFTIGG 404 Query: 368 -SGHPYPNDLKRMYQWIR---PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 S H + + + PQV + +HGE L L + V Sbjct: 405 FSSHAGQSQILTWLTHFKVNHPQVFL-VHGEQKALDVLAGLVRERFGLKVRIPGYLDEYA 463 Query: 424 LFPD-PIEIIDEVVHGLFLKDGFLIGKFADL---GIAKRR 459 L P + + D ++ + + +R+ Sbjct: 464 LTPGTEPVVSVDEAKARPHIDWDVVFNAMEGRLRLLKERK 503 >gi|124809291|ref|XP_001348538.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium falciparum 3D7] gi|23497434|gb|AAN36977.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium falciparum 3D7] Length = 876 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 14/106 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LGG E+G + + + +M+DCG+ P + + Sbjct: 1 MSN--INIVCLGGASEVGRSCVIIE----CDKTSVMLDCGI------HPAFMGIGCLPIY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL 104 + + ITH H DH GAL L + ++ + + Sbjct: 49 DAYDISKVDLCLITHFHMDHSGALPYLINKTRFKGRIFMTEATKSI 94 >gi|330827116|ref|YP_004390419.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans K601] gi|329312488|gb|AEB86903.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans K601] Length = 262 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 81/251 (32%), Gaps = 47/251 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G + + + I++D G + L + Sbjct: 1 MKVRI--LGCSGTLAKGCRTTSFLL---DERILVDAGTGVGELTL--------------E 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHV------PVYASPFAIGLLEAKRVYERVSKK 117 E + + +F+TH+H DH AL L + V+A P + L A + Sbjct: 42 EMQRVDHVFLTHSHLDHIAALPLLLDAVGAHRARPLRVHALPATLDALRAHVFNGVIWPD 101 Query: 118 IPCISFQAGDKVDVGAFSI-----------ESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I V + + E + HS+P + R G +++GD Sbjct: 102 FTRIPTPHAPFVRLLPLGVGDVFVVAGTPLEVLPARHSVP-AVGYAARGQRGWWIYSGD- 159 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDS--TNAM----REGTCISEKGIKKNIYDI 220 + + G+ AL ++ +NA R+ +S + + + + Sbjct: 160 TEGQEPAFWRRVNALRQS---PGGVAALCMETAFSNAEAELARKSQHLSPATLARELMAL 216 Query: 221 MKNAKGCVLVT 231 A + +T Sbjct: 217 PPGADLPIYIT 227 >gi|294055740|ref|YP_003549398.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] gi|293615073|gb|ADE55228.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] Length = 274 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 23/139 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKD---DLPGVDLVFPDITFIMKERKNLMAIFITH 75 N AL + I+ID G F ++ G I + L A+F+TH Sbjct: 14 GNCALLR----TENSKILIDAG--FSGKRICEMLGT---------IDETIDTLDAVFLTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH + L +PV+A+ ++AK +K + FQ G + Sbjct: 59 EHSDHAQGIRGLSKRQDLPVFANRDTADAVQAKL-----TKTVNWQVFQTGTEFSFRDLQ 113 Query: 136 IESVRVNHSIPETMALVIR 154 I S + H + + + Sbjct: 114 IRSFALPHDAYDPVGYCFQ 132 >gi|297569950|ref|YP_003691294.1| exonuclease of the beta-lactamase fold involved in RNA processing-like protein [Desulfurivibrio alkaliphilus AHT2] gi|296925865|gb|ADH86675.1| exonuclease of the beta-lactamase fold involved in RNA processing-like protein [Desulfurivibrio alkaliphilus AHT2] Length = 558 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 14/100 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER-KNLMA 70 GG G + ++ + G+ +ID G F D + + + + + A Sbjct: 45 GGQGVVSGSLHVLEIGAA----LFLIDVGTFFGGDGD--------NYPWPEEVAVEAVQA 92 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 +FI+HAH DH G L L P+Y + L Sbjct: 93 VFISHAHADHLGRLPLLLREGYRGPIYMTGITYELARQTL 132 >gi|13475489|ref|NP_107053.1| hypothetical protein mlr6574 [Mesorhizobium loti MAFF303099] gi|14026241|dbj|BAB52839.1| mlr6574 [Mesorhizobium loti MAFF303099] Length = 535 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 95/289 (32%), Gaps = 67/289 (23%) Query: 1 MKNEE---LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL-VFP 56 MK + L F G + + + + I+IDCG+ ++ FP Sbjct: 1 MKGDTDPVLRFH--GAAHGVTGSC----HEIETPHSRILIDCGLFQGSKSERELNYGQFP 54 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------ 109 + + + A+ +THAH DH G L L P++ + I L Sbjct: 55 FPS------EAIDAVILTHAHIDHSGLLAKLVKQGFSGPIHTTRATIDLCSVMLPDAAHV 108 Query: 110 ---VYERVSKKIPCISFQAGDKVD-----------------------VGAFSIESVRVNH 143 E+++++ + + H Sbjct: 109 QEMEVEQLNRRNAQRGRPPVEPIYSLSDAAACMTLFRAVEYGEWTTVAKGLRTRFWNAGH 168 Query: 144 SIPETMA-LVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + L I I+ +GD + TD + G G+ L+C+S Sbjct: 169 LLGSASVELEIDLDHQKRPMRILFSGDIGPGHKLL---QTDPE-----GPAGVDYLICES 220 Query: 199 TNAMREGTCISEKGIKKNIYDIM---KNAKGCVLVTTFSSSVSRIRSII 244 T RE +S + + + DI+ A G +++ +F+ V R + ++ Sbjct: 221 TYGDRERPDVSPEQRRSQLGDIVRRAAEAGGPLIIPSFA--VERTQELL 267 >gi|312876088|ref|ZP_07736076.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797074|gb|EFR13415.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 265 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 68/198 (34%), Gaps = 28/198 (14%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++E++F PL G G N L Y I++D GVSF K Sbjct: 2 SDEVLFCPLYSGSSG----NSILISY----KDTSIIVDAGVSFKKLAQ-----------A 42 Query: 61 IMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + K K + AI ++H H DH + L+VP+ + ++ + Sbjct: 43 LEKIGFNKKIDAILLSHDHYDHVKCAGVYFRKLNVPIITNYKTWESIKNSL---GKVDES 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGD 176 G VG+ I++ + H + M + D D A + D Sbjct: 100 YVKLIDTGTSFSVGSIGIDTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMID 159 Query: 177 VTDKDSLCAIGNEGILAL 194 +D L + + +L Sbjct: 160 FSDIILLESNHDVEMLMF 177 >gi|222150275|ref|YP_002559428.1| metallo-beta-lactamase family protein YycJ [Macrococcus caseolyticus JCSC5402] gi|222119397|dbj|BAH16732.1| metallo-beta-lactamase family protein YycJ [Macrococcus caseolyticus JCSC5402] Length = 263 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 79/230 (34%), Gaps = 24/230 (10%) Query: 20 NMALYGYG-------SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 NM++ G S + +++D G++ K + I ++ ++L I Sbjct: 3 NMSVLASGSTGNAVYVESEKGSLLVDAGLTGKKIEGL--------FDQIDRKVEHLNGIL 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH L L +PVYA+ +E ++ F + + Sbjct: 55 VTHEHIDHIKGLGVLARKYKLPVYANEKTWARIEH---ADKKIPSDQKFIFNPYETKSIA 111 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEG 190 IES V+H + + + + D + D + +D + + Sbjct: 112 GMDIESFGVSHDAVDPQFYIFNNNYKKLTVITDTGYVSDRMKGMIHGSDCYVFESNHDVD 171 Query: 191 ILAL----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 +L + + + +S + + D++ + + ++ S Sbjct: 172 MLRMGRYPWKTKQRILSDMGHVSNEDAAYAMRDVITGSTKRIYLSHLSQD 221 >gi|153854671|ref|ZP_01995921.1| hypothetical protein DORLON_01919 [Dorea longicatena DSM 13814] gi|149752775|gb|EDM62706.1| hypothetical protein DORLON_01919 [Dorea longicatena DSM 13814] Length = 207 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 21/158 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG IG N L + ++ +M+D G ++P V ++ L A+ + Sbjct: 8 VGMIGTNCYLV--INEETKDTVMVDPG-AYPAKLKNAV----------KEQGLKLKAVLL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRV---YERVSKKIPCISFQAGD 127 THAH DH L D+ + VPVY + ++ E+ + + + G Sbjct: 55 THAHFDHIMGLSDVMEDIKVPVYVEEADLPMMMDGESNLSSGYMRGGYQFADAVPVRDGQ 114 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ + F + P + ++ +GD Sbjct: 115 QLQIAGFQFRVIHTPGHTPGGCCYYMEQED--VLFSGD 150 >gi|325108776|ref|YP_004269844.1| RNA-metabolising metallo-beta-lactamase [Planctomyces brasiliensis DSM 5305] gi|324969044|gb|ADY59822.1| RNA-metabolising metallo-beta-lactamase [Planctomyces brasiliensis DSM 5305] Length = 464 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 91/298 (30%), Gaps = 89/298 (29%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------------SFPKDDLPG 50 +L F G GE+ + + + I++DCG+ F D PG Sbjct: 1 MQLTFY--GAAGEVTGS----QHLLEVEERRILLDCGLFQGRRAETRSKNEKFAYD--PG 52 Query: 51 VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 + ++ ++HAH DH G L L P+Y +P + Sbjct: 53 ----------------TVDSLALSHAHIDHCGNLPRLVKKGFRGPIYCTPATADVAAVML 96 Query: 110 VY------------ERVSKKIPC------------ISFQAGDKVDVGAF-------SIES 138 +R KK + + + +G I Sbjct: 97 ADAAKIQREDARYLQRHLKKGHPPIEPLYDQDDVERTIDQFEPLAIGPIHEIDSNLRIRF 156 Query: 139 VRVNHSIPETMALVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + H I + + +V++GD D +L D + L Sbjct: 157 LEAGH-ILGSAICQLDVQDEGVWKRVVYSGDLGRRDAPLLKDPQTLER--------TDVL 207 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 +C+ST R S IK+ + I+ A G ++V FS + R + + Sbjct: 208 ICESTYGNRVHPPTS--DIKQELKRIVHEAVTLGGRIIVPAFS--LGRTQQLTYFLND 261 >gi|254515099|ref|ZP_05127160.1| RNA-metabolising metallo-beta-lactamase [gamma proteobacterium NOR5-3] gi|219677342|gb|EED33707.1| RNA-metabolising metallo-beta-lactamase [gamma proteobacterium NOR5-3] Length = 469 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 81/283 (28%), Gaps = 63/283 (22%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 G E+ + L + +++DCG+ D VD + D F Sbjct: 3 SITSYGAAREVTGSCHLLESLACG---RVLLDCGMHQGGDA---VDRLH-DEDFAFDPAS 55 Query: 67 NLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRV----------YERVS 115 + A+ ++HAH DH G L L P+ +P LL + Sbjct: 56 -IDAVILSHAHLDHSGLLPRLCQGGFSGPILCTPATAELLRIMLHDAVGLYLRDLEHKNR 114 Query: 116 KKIPCISFQAGDKVDVGAF------------------------SIESVRVNHSIPETMAL 151 + + ++ H I + Sbjct: 115 RNARRGRPLVEASYGIDDVETALSACVGIEYGKPYALSGSDTATLCFHDAGH-ILGSAIC 173 Query: 152 VI----RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + +V +GD D ++ + + L+ +ST R+ Sbjct: 174 EVVLQEDGQQKRLVFSGDLGKTDSVLMREPAQL--------KEADILLMESTYGDRDHR- 224 Query: 208 ISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIA 247 E + DI++ G V++ F+ V R + ++ Sbjct: 225 -PEGDTVTELRDILRETWSRGGNVMIPAFA--VGRTQEVLFHL 264 >gi|218131057|ref|ZP_03459861.1| hypothetical protein BACEGG_02661 [Bacteroides eggerthii DSM 20697] gi|217986761|gb|EEC53094.1| hypothetical protein BACEGG_02661 [Bacteroides eggerthii DSM 20697] Length = 296 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 30 MKVRFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 73 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+F+TH H DH A+ L L++P+Y + E +++K+ Sbjct: 74 GINMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYT---TARIHEGINKSYCMTEKLHSS 130 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F IES V H + + I D Sbjct: 131 VRYLEKQQPMQLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 176 >gi|330824332|ref|YP_004387635.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans K601] gi|329309704|gb|AEB84119.1| beta-lactamase domain protein [Alicycliphilus denitrificans K601] Length = 469 Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 76/488 (15%), Positives = 133/488 (27%), Gaps = 93/488 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG E+ + L ++ ++DCG+ G + Sbjct: 1 MKLSF--LGAAREVTGSCFLVE----AANVRFLVDCGMV-----QGGRIAAARNHEPFAF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 + ++ + +THAH DH G L L +YA+P + LL Sbjct: 50 DPASIDFVLLTHAHIDHSGLLPKLTRAGFKGSIYATPATVDLLGVMLPDSAHIQESDAKR 109 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVGAFSI------------ESVRVNHSIPETMALV 152 + + V + + V H I + + Sbjct: 110 VAKRLKEKTVPPPLYTLQDAHECLQQVRGIEYDREFAPRVGVRARFRDAGH-ILGSAIVE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--T 206 + IV +GD IL D T E L+ +ST R Sbjct: 169 VWITEYGYPTKIVFSGDLGQPGRPILRDPT--------PIEEADILVIESTYGDRRHKDF 220 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 +E + + + G V+V F+ V R + ++ + + G + +V Sbjct: 221 SATEADMIGIVEKTLFERGGNVIVPAFA--VGRTQEVLYHLHR----LTCEGRLQRPMVF 274 Query: 267 ----VAIDVGIIKKDQLFLSDESFGLY-----PREQLIVIATGSQGEPRSALAQLSRG-- 315 +A + I ++ L L DE E L + + E AL ++ G Sbjct: 275 VDSPMATEATRITREHLELFDEQAKRLAGWHARGENLPYLDFTASAEESMALNRIRSGAI 334 Query: 316 -------------EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + + + Sbjct: 335 IISASGMCDAGRIRHHLRHNLPRRECSILFPGFQAQGTLGRRLIEGAERVRIFGEDIPVR 394 Query: 363 CPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +H +S H L + P +HGE +L Q+ V Sbjct: 395 AAIHSVDGLSAHADQKALLDWARAFIQAPAQTFVVHGESSAAQTFADLLQQQLGWQVTVP 454 Query: 417 RNGKMLRL 424 G LR Sbjct: 455 EYGHALRW 462 >gi|83816816|ref|YP_446051.1| Ysh1p: subunit of polyadenylation factor I, putative [Salinibacter ruber DSM 13855] gi|83758210|gb|ABC46323.1| Ysh1p: subunit of polyadenylation factor I, putative [Salinibacter ruber DSM 13855] Length = 464 Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 71/459 (15%), Positives = 134/459 (29%), Gaps = 66/459 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FL LG IG + + + I +D G G D P ++ Sbjct: 1 MKFLALGDTDGIGASC----HFLDLNGSGIALDAGT---DPQRDGPDS-LPRFDWVGDRA 52 Query: 66 KN-LMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLE------AKRVYERVSKK 117 + + +THAH DH G+L L H + + LL+ A+ +R + Sbjct: 53 DSYVDHTLVTHAHHDHMGSLPVLVRRFPHAMAHMTDATKKLLDILLPASARLQEKRRDRG 112 Query: 118 IPCIS-----------FQAGDKVDVG-AFSIESVRVNHSIPETMAL--VIRSPVGNIVHT 163 D+G F + + S+ I G + Sbjct: 113 ETTHEPLFTEDELEALHHLYLTHDLGQGFDLTGPKGQSSVTGRFFSAGHILGSAGVELQF 172 Query: 164 GDWKLDDDAILGDVTDKDSLCAIG----NEGILALMCDSTNAMREGTCISEK-----GIK 214 +W D T+ + I + L+ +ST + + + Sbjct: 173 EEWGRDRRVFYTSDTNMQAQTIIPGGEYPDSTDVLILESTQGAEPEAAATSRPEERDRFR 232 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVLLG--SSLKRV 264 K + ++ G L+ F + R + I+ + A I G ++ V Sbjct: 233 KTLSQVLARG-GTALIPVFV--MGRAQEILVLLGQLKREGAIPADVPIYTAGSMRAIAGV 289 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQ-----------LIVIATGSQGEPRSALA--- 310 + + P E ++V+++G EP + Sbjct: 290 YDDTRNTTPRVDASDEVYAVDQERVPYESEAKREILEGPGIMVVSSGMMIEPTLSNVLAR 349 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 ++ E V L +R + V L + SGH Sbjct: 350 RMVENEDDAVLLVGHPAEGTPARRLQDAAVEGDGAPVMLADGHGPQPVYCTVERFRFSGH 409 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEG 409 +L + + + P+ ++ IHG+P E + Sbjct: 410 SDRRELLSLVERMTPETVLLIHGDPDAKDWMAEHIKEAH 448 >gi|197103281|ref|YP_002128659.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] gi|196480557|gb|ACG80084.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] Length = 452 Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 50/275 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LGG G + + L + + I++DCG+ F + + Sbjct: 2 LSLTSLGGAGTVTGSKHLLEH----DGRSILVDCGL-FQGQKALREQ----NWAAFPVDP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 L + +THAH DH G + L + ++ + L + Sbjct: 53 AKLGGLVLTHAHLDHSGYIPKLVKEGFRERIVSTHATMELCDILLRDSGHIQENDAEFAN 112 Query: 112 ------ERVSKKIPCISFQAGDKVDVGAFSIE-----------SVRVNHSIPETMALVIR 154 + + + + + +R I I Sbjct: 113 RHGYSKHKPALPLYGVRDAERALEFFSPADVHKPIQLPGGAELMLRRAGHILGAATAEIA 172 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 +V +GD DDA++ D + + L+ +ST R Sbjct: 173 WGGRKVVFSGDLGRYDDAVMR---DPEPVPE-----ADYLIVESTYGNRHHEETDSTEAL 224 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + G V++ F+ V R ++++ + Sbjct: 225 GRAIERTVQRGGTVVIPAFA--VGRAQALLYHIWK 257 >gi|291546271|emb|CBL19379.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus sp. SR1/5] Length = 265 Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 17/166 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S +++D G+S + L +DL K++ I ITH Sbjct: 12 GNCIYVG----SEEAHVLVDVGISGKSIEKGLNSLDLT----------GKDVDGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+Y + + + + + + + ++ Sbjct: 58 HSDHIKGLGVISRKYGIPIYTTGGTADAM-LRMKSLGKMPEGLIHEIREDEPFGIKDLTV 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + H + + + ++ D +D I+ ++ + D+ Sbjct: 117 NPFTIPHDAAQPVGYRLECGEHSVGIATDLGKYNDYIVKNLENLDA 162 >gi|260588622|ref|ZP_05854535.1| VicX protein [Blautia hansenii DSM 20583] gi|331082026|ref|ZP_08331154.1| hypothetical protein HMPREF0992_00078 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541097|gb|EEX21666.1| VicX protein [Blautia hansenii DSM 20583] gi|330405621|gb|EGG85151.1| hypothetical protein HMPREF0992_00078 [Lachnospiraceae bacterium 6_1_63FAA] Length = 265 Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 17/182 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S +++D G+S ++ L ++ D I +TH Sbjct: 12 GNCIYVG----SDTTGLLVDVGISGKRIEEGLRSINHTTGDCN----------GILVTHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+Y + + ++ + +A + +G I Sbjct: 58 HSDHIKGLGVISRKYKIPIYCTRGTMEAMQG-MSSLGKMPEGLFHPIEANKRFQIGDLEI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + ++H E + + ++ D D+ I+ +++ D L N + L Sbjct: 117 QPFAISHDAAEPVGYRVNQGEKSVGIATDLGYYDEYIVQNLSGLDVLLLEANHDVNMLQV 176 Query: 197 DS 198 S Sbjct: 177 GS 178 >gi|157961243|ref|YP_001501277.1| RNA-metabolising metallo-beta-lactamase [Shewanella pealeana ATCC 700345] gi|157846243|gb|ABV86742.1| RNA-metabolising metallo-beta-lactamase [Shewanella pealeana ATCC 700345] Length = 502 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 74/484 (15%), Positives = 151/484 (31%), Gaps = 114/484 (23%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + SS I+IDCG+ F + G + V D I + ++ A+ Sbjct: 7 GAVNGVTGSCHQLDINPQSS---ILIDCGL-FQGAETAGRNAV--DQLKIEFDLSHITAL 60 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRV-------------YER 113 +TH H DH G + L + + P+YA+ L ++ +R Sbjct: 61 IVTHCHIDHVGRVPYLLAAGFNGPIYATTATAALLPLVIKDALKVGVTRNQRLISLYLKR 120 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVR------VNHSIPETMALVIRSPVGNIVH--TGD 165 + + I I +Q ++V V I + + I ++ H T + Sbjct: 121 LQQIIKPIDYQKWFNLEVNNSDCGYQHAKARFNVAGHILGSAYVEIELSDASLTHNCTHN 180 Query: 166 WKLDDDA-----------ILGDVTDKDSLCAIG---------------------NEGILA 193 + ++ D D Sbjct: 181 YTRNNTHKSTHQNTGIHSDNSHDCDADKKKDSHMVVFSGDLGATNTPLLPSPKSPLRADT 240 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ +ST + + +++ +++ A G VL+ FS + R + ++ EQ Sbjct: 241 LVIESTYGDKNHHNREHR--AESLRQVIERAVNDNGVVLIPAFS--IGRTQELLYELEQ- 295 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 + + + + + +D + D L+ E V+A S L Sbjct: 296 -IIFSQQQNPMWQSIDIIVDSPMAANFTEQYIDYKH-LWDTEAKAVLAEQRHPLDFSQLY 353 Query: 311 QLSRGEMR-----NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA------- 358 + + + +K TV+ ++ + + +++ L E V+ Sbjct: 354 TIDSHQDHLAVINYLASRQKPTVVIAASGMCTGGRIVNYLQRFLSEPTADVLFVGYQATG 413 Query: 359 ----------------------EDAECPVH----VSGHPYPNDLKRMYQWI--RPQVLVA 390 D + +H S H DL + I +P+ + Sbjct: 414 TIGRDIQEYGPRGGYVYIEGDKIDIKAGIHTISGYSAHADQQDLIDFVEGIKHKPKHIRI 473 Query: 391 IHGE 394 +HG+ Sbjct: 474 VHGD 477 >gi|266624223|ref|ZP_06117158.1| VicX protein [Clostridium hathewayi DSM 13479] gi|288863945|gb|EFC96243.1| VicX protein [Clostridium hathewayi DSM 13479] Length = 265 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 29/227 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S I++D G+S + + G++ + + L I ITH H Sbjct: 12 GNCIYVG----SDHSHILVDAGISNKRIEQ-GLNEI-------GLKGSELDGIVITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L VP+Y + + + +K+ Y + +G ++ Sbjct: 60 DHTKGLGVLARKYGVPLYGTKETLDEV-SKQKYLGEYPRELYHPISPDVDFFIGDLEVKP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 ++H +A I+ ++ D + D +G+ AL+ +S Sbjct: 119 FSIDHDAANPVAYRIQHDHKSVAVATDMG----HYDQYIID-------HLQGLDALLLES 167 Query: 199 TNAMR-----EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 + + ++ I + + G +L ++ RI Sbjct: 168 NHDVNMLQAGPYPYYLKRRILGDHGHLSNENAGRLLCCILHDNLKRI 214 >gi|172039432|ref|YP_001805933.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142] gi|171700886|gb|ACB53867.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142] Length = 557 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 138/416 (33%), Gaps = 54/416 (12%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMK-ERKNLMAIFITHAHEDHYGALHDLWSFLH 92 +++DCG+ D+T ++ + + A+F +HAH DH L L Sbjct: 41 RLLLDCGLR--------------DLTPLLNQNQPPVDAVFCSHAHSDHARGLKALHETFP 86 Query: 93 V-PVYASPFAIGLLEAKRVYERVSKKIPCIS--FQAGDKVDVGAFSIESVRVNHSIPETM 149 P+YAS LL + K F +++ R H +P Sbjct: 87 TLPIYASHVTKQLLPLNWPEKNSPKTANFCQGLFWEKPFELFDDLTVQLFRAGH-LPGAA 145 Query: 150 ALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 +++ V +++TGD+ L + ++ ++ + A+ L+ + T Sbjct: 146 CILLTYRTVERVYKLLYTGDFSLSNLQLVEGLS----IEALRGLSPDILIIEGTYGTMRH 201 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 ++ K+ + I + V ++ + I+ + + G L V Sbjct: 202 PHRRQQE-KQLMQRIHECLTHGYSVVLPVPTLGLGQEILKLLRSHHQ---FTGRDLDIWV 257 Query: 266 S------VAIDVGIIKKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQ---LSR 314 + ++ + L + + + E++ + R + Q + Sbjct: 258 DGEVANACDRYLDLLPEFPLSVQNFAKHQPLFWDERICPRLRRLTPQQRGKIGQTPCIVL 317 Query: 315 GEMRNVKLAEKDT------VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + E ++F + G + I + + ++ Sbjct: 318 TDDLTTLYDEGYLLSGLWVMLFPASPHEGETLESPEIVRLMERVSIH------SESYVLA 371 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H + ++ +RPQ ++ +HG P++L L + + GK++ L Sbjct: 372 EHSDGRNTTQLIHNLRPQHIIFVHGSPINLTDLTSLEELQNRYQLHLPSTGKLVEL 427 >gi|301063472|ref|ZP_07204004.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300442411|gb|EFK06644.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 257 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 18/155 (11%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 G G + L + I++D G+S G++ + + + ++L AIF+ Sbjct: 8 SGSRGNSCYL-----ETGSARILVDAGLS-------GIE-IERRMAAVGVSPQSLDAIFV 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH + L ++PVYA+ + + + K ISFQ G+ + + Sbjct: 55 THEHTDHVKGVGVLARRYNLPVYANRETLD-----CAQKALGKLPSVISFQTGETLTINN 109 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 SIE+ H + ALV R+ I D Sbjct: 110 LSIETFTKCHDAADPTALVFRNNGIKIGLVTDMGR 144 >gi|187928082|ref|YP_001898569.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12J] gi|187724972|gb|ACD26137.1| beta-lactamase domain protein [Ralstonia pickettii 12J] Length = 261 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 14/162 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F LG E N L S ++ I++DCG G+ + + Sbjct: 1 MTLRFASLGSGSE--GNALLVESASGATCTRILLDCG--------FGIRETVRRLERLGC 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++L AI +TH H DH G+ + + + ++PV+ S R + + Sbjct: 51 TPESLNAILVTHEHSDHVGSAYAVAAKFNIPVWTSHGTY----RATENLRGADRAAVRFC 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +A D VG I V H E + V + D Sbjct: 107 RADDMFSVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTD 148 >gi|90022265|ref|YP_528092.1| beta-lactamase-like protein [Saccharophagus degradans 2-40] gi|89951865|gb|ABD81880.1| beta-lactamase-like protein [Saccharophagus degradans 2-40] Length = 258 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 21/156 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N + G +++DCG + + + E Sbjct: 1 MKFASLG-SGSSG-NATVIACGDVV----LLVDCGFGIKDTER--------RLARLGLEA 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K++ AI +TH H DH + L +PVY + L + I Sbjct: 47 KDISAIVVTHEHSDHIKGVAPLARKYKMPVYMTRGT-FLAR----EYGNIPSLHLIEN-- 99 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + ++ V V H E I SP ++ Sbjct: 100 YQPFSIAHLTVTPVAVPHDAREPAQYTITSPDYGVL 135 >gi|282891396|ref|ZP_06299895.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498681|gb|EFB41001.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 265 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 57/161 (35%), Gaps = 19/161 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 F PL G G N G + I+ID G+S + ++ + E + Sbjct: 4 FCPL-ASGSKG-NCIYVG----TPHTKILIDAGIS--------GKRIKEELAQLNVELTD 49 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AIFITH H DH L L L +PV+A+ K + E F G+ Sbjct: 50 IDAIFITHEHTDHIQGLRVLAYKLGIPVFANHETA-----KGIVECFHDCPKFKIFTTGE 104 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G + + H + + I++ + D Sbjct: 105 SFLFGDLEVHPFSIQHDTIDPVGFTIKTDQLKLGFCTDLGF 145 >gi|284037601|ref|YP_003387531.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283816894|gb|ADB38732.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 481 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 86/506 (16%), Positives = 156/506 (30%), Gaps = 110/506 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---------------SFPKDDL 48 +L F LG ++ +M L I+IDCG + P Sbjct: 1 MKLSF--LGAARQVTGSMYLLE---LEDDYRILIDCGSDLERSTPREASSNGQTTPAVTH 55 Query: 49 PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL--- 104 PG F E ++ + +THAH DH G L +L+ + + L Sbjct: 56 PG---------FFPFEASSINLVLLTHAHVDHSGNLPNLFREGYEGQILCTEPTFALTNV 106 Query: 105 -------LEAKRVYERVSKKIPCISFQAGDK-----------------VDVG-------- 132 L KR+ E + K + + V +G Sbjct: 107 LLKDAASLNQKRINELNASKKQRVKDRQVQMQKDLFLDKQVRETMENVVPIGFNRKFKVA 166 Query: 133 -AFSIESVRVNHSIPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + + H + +VI +I +GD + +L D Sbjct: 167 DGVDVTFIPAGH-LLGAAHIVINVVENGERKSICFSGDIGRKNYPLLVDPA--------T 217 Query: 188 NEGILALMCDSTNAMREGTC--ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + L+C+ST R E + I + G +++ +FS V R ++++ Sbjct: 218 VPPVDYLVCESTYGNRLHEHLMTPEDALADIIQRTCIDIPGRLIIPSFS--VGRTQALLY 275 Query: 246 -----IAEQIGRKIVLLGSS----------LKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 E+ I + S ++ + + + K+ L D + Sbjct: 276 TLNRLYTERNFPPIKVFSDSPMGFESTKIYMQHIKMLNAEAREFYKENEALFDFQNFEFL 335 Query: 291 REQLIVIATGSQGEPRSALAQ--LSRGEMRNVKLAEKDTVIFSSRAIPGN---EVAIGHI 345 A + GEP ++ + +G +AE + +++ I G + Sbjct: 336 ESAKASKAVSNYGEPCIIISSSGMVQGGRVEYHVAENISNPYATILIIGYCAEGTLGWRL 395 Query: 346 KNRLVEQGVRVIAEDAECPV----HVSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHL 398 N ++ V SGH NDL P + + +HGE + Sbjct: 396 LNGQQTLSIKGKDHQVLANVEKIDVFSGHGDRNDLINFVSMQSPETLRNIFLVHGEYESM 455 Query: 399 VAHKELALQEGIACVPPVRNGKMLRL 424 + K +EG V + G+ L Sbjct: 456 ESFKATLAEEGYPQVIIPKKGESFEL 481 >gi|328946753|gb|EGG40891.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1087] Length = 266 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L ++ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYNLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFAMLTDTGYVSDRMAGIIENAD 163 >gi|254422627|ref|ZP_05036345.1| metallo-beta-lactamase superfamily protein [Synechococcus sp. PCC 7335] gi|196190116|gb|EDX85080.1| metallo-beta-lactamase superfamily protein [Synechococcus sp. PCC 7335] Length = 554 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 67/477 (14%), Positives = 134/477 (28%), Gaps = 68/477 (14%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH-V 93 I+ DCG++ DIT + + + F +HAH DH L L + Sbjct: 29 ILFDCGLA--------------DITALRGKSADFA--FCSHAHTDHIRGLLSLHRTFPLL 72 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALV 152 P++AS LL + S C S V++ S++ H +P A + Sbjct: 73 PIFASDVTTRLLP--LNWPGQSDANFCRSLPWRSPVEIAPGLSVQLWPAGH-MPGAAAFL 129 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISE 210 + ++ + D G + D L + N L+ + + E Sbjct: 130 LTYQTTQRTYSVFYSGDCFLSNGRLVDGMPLAELRNLKPDVLIVEGSYGTERHPHRKQQE 189 Query: 211 KGIKKNIYDIMKNAKGCVL---VTTFSSSVSRIRSIIDIAEQIGRKIVLLG--------- 258 + + + + + V + + + + + Sbjct: 190 NYLVERLSIALAHGGRAVFPSPLLGLGQELLMLMRSHHNFTGQPINVWVDPLIARGCDAY 249 Query: 259 ----SSLKRVVSVAIDVGIIKKDQLFLS----------DESFGLYPREQLIVIATGSQGE 304 S+L V + D+ L E P + ++ + Sbjct: 250 LGCLSALPTTVQNFAQHQPLFWDERVLPRVRRLESQTSPEMLADEPEATVFIVHPATHPS 309 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + + S + G H + L E V +E E Sbjct: 310 AYGMASAADWTVFVPDAQSISLWQAQLSEQMYG----AYHRFDWLAELASLVDSETVEHY 365 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + ++ H ++ +RPQ ++ +HG+ L L + + +++ L Sbjct: 366 M-LTNHCDGVGTTQLIHNLRPQHVIFVHGDQHQLNNLASLDDLQARYHLHLPTPAQLIDL 424 Query: 425 FPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRR-----------QLSFVGHLSVN 470 G + G+ R QLS G + + Sbjct: 425 PLASAFWQPAPPQGTPYEGE---INIDSQGVQLRLPPLVGSDPRWAQLSDTGIVEAS 478 >gi|83590035|ref|YP_430044.1| RNA-metabolising metallo-beta-lactamase [Moorella thermoacetica ATCC 39073] gi|83572949|gb|ABC19501.1| RNA-metabolising metallo-beta-lactamase [Moorella thermoacetica ATCC 39073] Length = 536 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 12/116 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F G G + + L G ++IDCG+ F + + Sbjct: 3 KLQFC--GAAGTVTGSCYLLDTGRYR----LLIDCGL-FQGSKA----IKERNYGPFPFN 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + A+ +THAH DH G + L+ P++ +P L +++ Sbjct: 52 PGAIDALILTHAHIDHCGLIPKLYLQGFKGPIFTTPVTAELARVLLPDCGHIQEME 107 >gi|317477057|ref|ZP_07936299.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] gi|316906850|gb|EFV28562.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] Length = 267 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 1 MKVRFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+F+TH H DH A+ L L++P+Y + E +++K+ Sbjct: 45 GINMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYT---TARIHEGINKSYCMTEKLHSS 101 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F IES V H + + I D Sbjct: 102 VRYLEKQQPMQLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|331005417|ref|ZP_08328798.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] gi|330420777|gb|EGG95062.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] Length = 272 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 92/284 (32%), Gaps = 43/284 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRK-------WIMIDCGVSFPKDDLPGVDLVFPDI 58 + F LG G G N + ++IDCG + + + + Sbjct: 3 IAFSSLG-SGSKG-NGTVVRTLVSDKDSDVNTSSTIVLIDCGFTIKETER--------RL 52 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + +L AI +TH H DH + L ++PVY + +++ Sbjct: 53 ARLDLTPSHLDAIIVTHEHGDHIKGVGPLARKYNLPVYITAGT-------FRSKKIGALD 105 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGD 176 + D+ AF I V V H E +I + D + Sbjct: 106 DVRLIHRYEPFDINAFHITPVAVPHDASEPAQFIIECDNKRLGILTDLGNISPHVEMHYQ 165 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMR-------EGTCISEKGIKKNIYDIMKNAKGCVL 229 D L A + A++ S +S + + + + + ++ Sbjct: 166 SCDALILEANHDP---AMLASSAYPFSLKQRVGGAWGHLSNQQAARFLESVDRQKLQHLV 222 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 V +SR + +++A+Q ++ S+K VV D G Sbjct: 223 VA----HISRQNNSVELAQQAFNDVLA---SIKNVVYACQDDGF 259 >gi|20808969|ref|NP_624140.1| beta-lactamase superfamily hydrolase [Thermoanaerobacter tengcongensis MB4] gi|20517634|gb|AAM25744.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Thermoanaerobacter tengcongensis MB4] Length = 259 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 17/176 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N GY +++D G++ ++ + I + + AI ITH H+ Sbjct: 12 GNAIYIGYKDVH----LLVDAGLTGRT-----IEKALLN---IGVHPEQISAILITHEHK 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+ +E + ++ ++ + ++G I+ Sbjct: 60 DHILGAGVLSRRYDIPIYANKATWEAMERDVKEIKEENRLYFVTGEE---FEIGEIKIKP 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 + H E + ++ I D + A +D L A + +L Sbjct: 117 FKKPHDAAEPVGFSFKAGGKKISIATDLGYMTRGVAYNLMESDLILLEANHDVKML 172 >gi|227535925|ref|ZP_03965974.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300] gi|300771633|ref|ZP_07081508.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861] gi|227244168|gb|EEI94183.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300] gi|300761622|gb|EFK58443.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861] Length = 260 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 18/171 (10%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDL-PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 Y + I++D G++ L G + PD + AIFITH H DH Sbjct: 14 CYYVAKNDSAILVDAGINSKHIHLRMGNLGIQPDT---------IKAIFITHEHTDHIRG 64 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L ++PVY + + R + DKV++G ++ + H Sbjct: 65 LSVFSKKYNLPVYITEG------SYRGSRLHLPSHLVHVIKPDDKVEIGELTVYGIPKYH 118 Query: 144 SIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGIL 192 E + ++ NI D D+ + D L + +E +L Sbjct: 119 DAKEPCSFLVSDGQYNIGILTDIGRACDNVRYVIQHADILLLESNYDEEML 169 >gi|171910011|ref|ZP_02925481.1| hypothetical protein VspiD_02525 [Verrucomicrobium spinosum DSM 4136] Length = 334 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 69/248 (27%), Gaps = 37/248 (14%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N A+ + R +++D G+S + + + L I Sbjct: 8 GSGSSG-NCAVLR----TERTCLLVDAGLS--------ARRITQRLEQVGLSVGQLDGIL 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH L L VP++ +P L + R Q G Sbjct: 55 LTHEHGDHTAGLEVLCRKHEVPLFCTPLTQETLMSSFEKAR----PRWRIMQTGAAFQFQ 110 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGN------IVHTGDWKLD-----DDAILGDVTDKD 181 IE V H + + +I+ + + D + D Sbjct: 111 DLRIECFPVPHDAVDPVGFLIQDEDSRLGVLSDVGFITNLIRDRLKGVHTLFMEANYDGP 170 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT-----TFSSS 236 L A +S + + + + V++ + Sbjct: 171 LLEADTKRP----WATKQRISGRHGHLSNEQAAELVQHLAHEHLQHVILGHLSEDCNCPN 226 Query: 237 VSRIRSII 244 V+R + Sbjct: 227 VARQKITA 234 >gi|222529268|ref|YP_002573150.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor bescii DSM 6725] gi|222456115|gb|ACM60377.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor bescii DSM 6725] Length = 540 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 76/520 (14%), Positives = 159/520 (30%), Gaps = 94/520 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ K ++DCG+ G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLF----DLEGKKFLVDCGM-----FQGGLTEELLNYEAFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL---------------LEAKR 109 + + ++HAH DH G + L+ +Y + + L +E K Sbjct: 52 SEIEFVILSHAHIDHSGRIPKLYKDGFRGVIYTTDATMDLCSIMLPDSAHIQESEIEWKN 111 Query: 110 VYERVSKKIPCIS----------------FQAGDKVDV-GAFSIESVRVNHSIPETMALV 152 + K + + G K+ + S H + + + Sbjct: 112 RKRKREGKELLVPLYTLEDAENVLKHFRGVKYGQKIQIDKNLSFVFKDAGH-MLGSAIVE 170 Query: 153 IRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD + IL D T + L +ST R + Sbjct: 171 LYIKENGKEYKLVFSGDLGNRNVPILKDPT--------IIDDCDYLFIESTYGNRLHVDV 222 Query: 209 SEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 K K NI + G V++ +F+ V R + I+ + + + R V + Sbjct: 223 ENKSKKLINIISTTISNGGKVIIPSFA--VGRTQEILYEIAK-EISTDSEEAKIIRNVEI 279 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG-EPRSALAQLSRGEMRNVKLAEKD 326 +D + + + + E + I G EP + S E + + +K Sbjct: 280 FVDS-PLATSATAIYKKHIDYFDTEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKS 338 Query: 327 TVIFSSRAI--PG-----------NEVA-------------IGHIKNRLVEQGV----RV 356 +I SS + G NE + + + + Sbjct: 339 CIIISSSGMCEAGRIKHHLKHNLWNEKNTVLFVGYQAPNTLGRRLLDGQKKVKIFGEEVE 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + E SGH + L + + +P+ + +HGE + + V Sbjct: 399 VRAKIEYIEAYSGHADKSGLFSWIEQMNQKPKKIFVVHGEKEVQLEFAKELQNRFNTDVI 458 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHG-LFLKDGFLIGKFADL 453 G+M + P+ + + + + ++ + D+ Sbjct: 459 VPARGEMYEIAPEYVAQSERLFSELPSFINLSVLAQIEDI 498 >gi|289450561|ref|YP_003475551.1| metallo-beta-lactamase domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185108|gb|ADC91533.1| metallo-beta-lactamase domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 273 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 11/141 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + R+ ++ID G+S + +L DI+ ++ IFI+H H DH L Sbjct: 14 SYLFLNRREAVLIDAGLSLRSLKMKLAELGLQDIS--------ILGIFISHEHSDHVKGL 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + + ++ + G LE+K R +K A ++D+ F++++V ++H Sbjct: 66 EAIANNFKASIFITNGTKGALESKM---RHPEKQKWRIIAAQSEIDLAGFAVKAVAISHD 122 Query: 145 IPETMALVIRSPVGNIVHTGD 165 E +A + + D Sbjct: 123 ATEPVAFTVSCGGLKVAVVSD 143 >gi|167949360|ref|ZP_02536434.1| Beta-lactamase-like protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 257 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 59/163 (36%), Gaps = 18/163 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L G +++DCG FP + V + + E Sbjct: 1 MRFASLG-SGSRG-NALLVDSGGVR----VLLDCG--FPATE------VERRLQRLGVEA 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ AI +TH H DH + L +PV+ + L +A+ ++ I Sbjct: 47 GSIDAIIVTHEHGDHLRGVGPLARRHEIPVWMTEGTRSLAQARCGE---LPEVHAIDSH- 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G SIE + H E V + + D Sbjct: 103 CSRFCIGDLSIEPFPIPHDAREPCQFVFQKGGLRLGVVTDAGC 145 >gi|289432844|ref|YP_003462717.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT] gi|288946564|gb|ADC74261.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT] Length = 468 Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats. Identities = 70/453 (15%), Positives = 142/453 (31%), Gaps = 78/453 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG N+ Y + +++DCG+ + + L + D+ Sbjct: 3 IKIQFLGAAQ----NVTGSRYLLQTDHTRLLVDCGL-YQERHLQNRNWQPFDVP-----P 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------------AK 108 ++L A+ ++HAH DH G L L + PVY + + K Sbjct: 53 ESLNAVLVSHAHIDHCGLLPKLVKDGYNGPVYLTAATAEIARISLADAGKIQEEDAAFKK 112 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS---IPETMALVIRSPVGNIVHTGD 165 +ER +K D A V ++ G++ + Sbjct: 113 TRHEREGRKTQYPEIPLYTAEDARAVFPLFKTVAYNRKITISPDITATFHNAGHVFGSAS 172 Query: 166 W-----KLDDDAILGDVTDKDSLCAIGNEGILA------LMCDSTNAMREGTCISEKGIK 214 + + ++ D + + ++ +ST R I+E +K Sbjct: 173 IELKITENNHQKVIAFSGDLGNWDRPILKNPDLINQADYIVIESTYGDRTHEDINEALLK 232 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSSLKRVVSV 267 +I + G V++ +F+ + R + ++ +I R V + S + ++ Sbjct: 233 LADIINQTVKLGGNVVIPSFA--LERTQDLLFFLNRLISESKIPRLKVFVDSPMAISITK 290 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA----------------- 310 D+ G P E + T G+ + LA Sbjct: 291 IFKEHPELYDRETTGWVKNGSSPFEFEGLHFTNKAGDSEAILAEKDSCIIIAGSGMCTGG 350 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDAECPV---- 365 ++ R N+ + T++F G +G + + + E + + Sbjct: 351 RIKRHLASNIS-RPESTILFVGFQATG---TLGRLITDGVKEVRILGQYYPVHARIEELR 406 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 S H L R + + P+ + HGEP Sbjct: 407 AFSAHADQPTLLRWLKGFKNRPEQVFVTHGEPK 439 >gi|16263064|ref|NP_435857.1| Metallo-beta-lactamase superfamily protein [Sinorhizobium meliloti 1021] gi|14523721|gb|AAK65269.1| Metallo-beta-lactamase superfamily protein [Sinorhizobium meliloti 1021] Length = 531 Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + F G G + + L +G+ I++DCG+ F +L + D F Sbjct: 2 MIEPTIRFD--GAAGTVTGSCQLVEFGATK----ILVDCGL-FQGSKTEK-ELNYRDFPF 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 + K + A+ +THAH DH G L L P++A+P L Sbjct: 54 ---DPKTIDAVILTHAHIDHSGLLPKLARLGYDGPIFATPATTDLCSVML 100 >gi|114568746|ref|YP_755426.1| beta-lactamase domain-containing protein [Maricaulis maris MCS10] gi|114339208|gb|ABI64488.1| beta-lactamase domain protein [Maricaulis maris MCS10] Length = 455 Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 86/281 (30%), Gaps = 55/281 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G + + Y +IDCG+ L + P I Sbjct: 5 LRF--LGAAGTVTGS----KYRLDLGTHKWLIDCGLFQGHRSLRERNWRHPAI-----NP 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------- 109 L + +THAH DH G L L PVYA+ + L Sbjct: 54 SELRGVLLTHAHIDHSGYLPVLTKSGFAGPVYATRATVDLCRILLPDSGFLQEKDAEFAN 113 Query: 110 ----VYERVSKKIPCISFQA-----GDKVDVGAFS-------IESVRVNHSIPETMALVI 153 R +K + + +D G F H I + + Sbjct: 114 RHGTSRHRPAKPLYTRADAEDALALFKGLDFGDFQELGHGFAARFHPAGH-ILGAAVIEL 172 Query: 154 RSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 P V +GD + A + L L+ +ST R+ I + Sbjct: 173 DLPNGKTAVFSGDLGRPNSATM--------LRPETVTHADYLIVESTYGNRKHKDIEVED 224 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 + I I G ++V F+ V R +S++ Q+ R Sbjct: 225 LLAEIVSITAKRGGTIIVPAFA--VGRAQSLLYHLSQLKRD 263 >gi|91794640|ref|YP_564291.1| RNA-metabolising metallo-beta-lactamase [Shewanella denitrificans OS217] gi|91716642|gb|ABE56568.1| RNA-metabolising metallo-beta-lactamase [Shewanella denitrificans OS217] Length = 490 Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 104/352 (29%), Gaps = 83/352 (23%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L + +++DCG+ D+L D F + + Sbjct: 8 LGATQEVTGSCHLL----TVDGQQLLLDCGLIQGGKADELRNHDP----FDF---KPSQI 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCI 121 A+ ++HAH DH G L L + P+Y L A +K + Sbjct: 57 DAVILSHAHIDHSGRLPLLVKQGFNGPIYTHKATAELCGIMLRDAAMLQERDAQRKSKKL 116 Query: 122 SFQAGDKVD--------------------------VGAFSIESVRVNHSIPETMALVIR- 154 D VD + S+ H I + + + Sbjct: 117 KKLNLDPVDALFDEDDVEAVLKLFVPLEYGAQTKLMPHVSVRLSDAGH-ILGSAIVELWL 175 Query: 155 ---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 S IV +GD D IL D DS ++ +ST R E Sbjct: 176 AEGSEAKKIVFSGDLGRADMPILDDPCLIDS--------ADLVLMESTYGNRLHRSWEET 227 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 +K +K ++G +L+ FS V R + ++ + Sbjct: 228 LTELKAIFASTIKQSRGNILLPAFS--VGRAQELLYLFHLY------------------- 266 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + +S Q+ V E +LS G+ + Sbjct: 267 -AKEWDLSRWRICLDSPMAIKATQVYVNNYPLMDEDFKRFTRLSPGKHPLLS 317 >gi|307825666|ref|ZP_07655883.1| RNA-metabolising metallo-beta-lactamase [Methylobacter tundripaludum SV96] gi|307733243|gb|EFO04103.1| RNA-metabolising metallo-beta-lactamase [Methylobacter tundripaludum SV96] Length = 466 Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 94/279 (33%), Gaps = 62/279 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G++ + L GS I++DCG+ + + + F + + A Sbjct: 7 LGATGQVTGSCYLLETGS----SRILLDCGLFQGSRETEKQNE--AEFPF---DPAGIDA 57 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 + ++HAH DH G L L PV+ + + LLE + ++ ++ + Sbjct: 58 VVLSHAHLDHCGRLPKLAKDGFKGPVFLTEASFPLLELMLMDAAHL-QLRDTEWENKRRE 116 Query: 130 DVGA---------------------------------FSIESVRVNHSIPETMALVIRSP 156 G S+ H I + + +R Sbjct: 117 RAGKPLLEPLYTEADVKMLLALRQPIAYGVETKILPELSVSFHEAGH-ILGSSIVRLRIN 175 Query: 157 VGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 + +V +GD + +L D T L+ +ST R+ + Sbjct: 176 DKDKTKTLVFSGDLGNLNSPLLRDPTVLTE--------ADVLLLESTYGDRDHKPLGNTL 227 Query: 212 -GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +++ + + + G V++ F+ V R + +I + Sbjct: 228 DELRETLAEA-AESGGNVIIPAFA--VGRTQDLIYWLGK 263 >gi|254520739|ref|ZP_05132795.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226914488|gb|EEH99689.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 263 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 15/151 (9%) Query: 35 IMIDCGVSFPKDDLPG--VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 I+ID G+ PG +D I + ++ IF+TH H DH + L Sbjct: 24 ILIDAGL-------PGKKIDDAL---KSIGENPSDIDGIFVTHEHSDHIKGIGVLSRKYD 73 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +P+Y++ +E K+ + + I S + H + Sbjct: 74 IPIYSNSDTWMAMEGSI---GKIKEHNMRIMDRRSTLSIKDLDIISFNIPHDAVAPVGYT 130 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + + D+ + + I ++ D + + Sbjct: 131 MHHNGKKVSVITDFGIYTEEIRDNIRDSEVM 161 >gi|73748823|ref|YP_308062.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] gi|73660539|emb|CAI83146.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] Length = 468 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 69/453 (15%), Positives = 141/453 (31%), Gaps = 78/453 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG N+ Y + +++DCG+ + + L + D+ Sbjct: 3 IKIQFLGAAQ----NVTGSRYLLQTDHTRLLVDCGL-YQERHLQNRNWQPFDVP-----P 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------------AK 108 ++L A+ ++HAH DH G L L + PVY + + K Sbjct: 53 ESLNAVLVSHAHIDHCGLLPKLVKDGYNGPVYLTAATAEIARISLADAGKIQEEDAAFKK 112 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS---IPETMALVIRSPVGNIVHTGD 165 +ER +K D A V ++ G++ + Sbjct: 113 TRHEREGRKTQYPEIPLYTAEDARAVFPLFKTVAYNRKITISPDITATFHNAGHVFGSAS 172 Query: 166 W-----KLDDDAILGDVTDKDSLCAIGNEGILA------LMCDSTNAMREGTCISEKGIK 214 + + ++ D + + ++ +ST R I+E +K Sbjct: 173 IELKITENNHQKVIAFSGDLGNWDRPILKNPDLINQADYIVIESTYGDRTHEDINEALLK 232 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSSLKRVVSV 267 +I + G V++ +F+ + R + ++ +I R V + S + ++ Sbjct: 233 LADIINQTVKLGGNVVIPSFA--LERTQDLLFFLNRLISESKIPRLKVFVDSPMAISITK 290 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA----------------- 310 D+ G P E + T + + LA Sbjct: 291 IFKEHPELYDRETTGWVKNGSSPFEFEGLHFTNKAADSEAILAEKDSCIIIAGSGMCTGG 350 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDAECPV---- 365 ++ R N+ + T++F G +G + + + E + + Sbjct: 351 RIKRHLASNIS-RPESTILFVGFQATG---TLGRLITDGVKEVRILGQYYPVHARIEELR 406 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 S H L R + + P+ + HGEP Sbjct: 407 AFSAHADQPTLLRWLKGFKNRPEQVFVTHGEPK 439 >gi|119494059|ref|ZP_01624611.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106] gi|119452196|gb|EAW33398.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106] Length = 518 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 130/389 (33%), Gaps = 41/389 (10%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIM---KERKNLMAIFITHAHEDH-YGALHDLW 88 I++DCG+ DI+ ++ K + +F THAH DH G L Sbjct: 7 HRILLDCGIQ--------------DISPLLATSKRSQPADFVFCTHAHADHAIGLLALHQ 52 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD----VGAFSIESVRVNHS 144 ++ +P+YAS LL + +S + Q S H Sbjct: 53 AYPQLPIYASEVTAQLLP--LNWPEISPQEMPQFCQPLSWKSEIQLQKGLSATLFPAGH- 109 Query: 145 IPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 +P A++++ +++TGD+ L + ++ + L ++ +L L Sbjct: 110 LPGAAAILLKYHAPERTYKLLYTGDFFLSNSRLVEGLP-LGELRSL-KPDVLILEGSYGT 167 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--GRKI-VLL 257 A E + + I + + +L T + + ++ + GR I + + Sbjct: 168 ARHPHRRQLENQLAERIEQAL-TSGYSILFPTPPLGLGQELLMLLRSHHYFTGRDIDIWV 226 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS--RG 315 + + + +++ + + L+ E++ E L++ Sbjct: 227 DRQVSQGCDIYLELLPYFPTSVQNFAQHQPLFWDERIRPRVRRLTSEQSPTLSEFPCVVI 286 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPND 375 R + S + E +K +S H Sbjct: 287 AERETWGQQYADYQRESWVLFWPERPGQALK----IPPELESQFQRVETYFLSEHSDGAG 342 Query: 376 LKRMYQWIRPQVLVAIHGEPLHLVAHKEL 404 + ++ +RPQ ++ +HG PL+L L Sbjct: 343 ITQLIHNVRPQHVIFVHGSPLYLADLTNL 371 >gi|167763041|ref|ZP_02435168.1| hypothetical protein BACSTE_01407 [Bacteroides stercoris ATCC 43183] gi|167699381|gb|EDS15960.1| hypothetical protein BACSTE_01407 [Bacteroides stercoris ATCC 43183] Length = 267 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 1 MKVRFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+F+TH H DH A+ L L++P+Y + E +++K+ Sbjct: 45 GINMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYT---TARIHEGINKSYCMTEKLHSS 101 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F IES V H + + I D Sbjct: 102 VRYLEKQQPMQLEDFRIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|26988506|ref|NP_743931.1| beta-lactamase domain protein [Pseudomonas putida KT2440] gi|24983272|gb|AAN67395.1|AE016366_3 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 477 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 31/257 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + G +S +++DCG+ D PG + + + + A+ Sbjct: 10 GGTRGVTGSCHQLHLGPSTS---LLVDCGLEQGSDAPPGAES-----APLGFDIHGIQAL 61 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVS--KKIPCISFQAGDK 128 ITH H DH G + L + P+ S + LL P + + Sbjct: 62 VITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLSISSEPAQVARYLEF 121 Query: 129 VD--VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVTDKDSLC 184 + + E P + G+++ + + D + L Sbjct: 122 IRDLIVPLPFEQWHTVVEYPGLACRIRLQRAGHLLGSAYVECDMQHEQTNSRYVFSGDLG 181 Query: 185 AIGN---------EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTT 232 A GN E L+ +ST R ++ ++ + D + A KG +LV Sbjct: 182 ACGNPLLRPVQPPERADVLVLESTYGDRLHPQADDR--RQRLEDAIDRALADKGTLLVPA 239 Query: 233 FSSSVSRIRSIIDIAEQ 249 FS + R + ++ E Sbjct: 240 FS--LGRTQELLYELED 254 >gi|312792824|ref|YP_004025747.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179964|gb|ADQ40134.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 265 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 67/198 (33%), Gaps = 28/198 (14%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++E++F PL G G N L Y I++D GVSF K Sbjct: 2 SDEMLFCPLYSGSSG----NSILISY----KDTSIIVDAGVSFKKLAQ-----------A 42 Query: 61 IMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + K K + AI ++H H DH + L+VP+ + ++ + Sbjct: 43 LEKIGFNKKIDAILLSHDHYDHVKCAGVYFRKLNVPIITNYKTWESIKNSL---GKVDES 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGD 176 G VG+ I + + H + M + D D A + D Sbjct: 100 YVKLIDTGTSFSVGSIGIGTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMID 159 Query: 177 VTDKDSLCAIGNEGILAL 194 +D L + + +L Sbjct: 160 FSDIILLESNHDVEMLMF 177 >gi|71906487|ref|YP_284074.1| Beta-lactamase-like [Dechloromonas aromatica RCB] gi|71846108|gb|AAZ45604.1| Beta-lactamase-like protein [Dechloromonas aromatica RCB] Length = 255 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 20/162 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L +G+ +M+DCG G+ + + ++ Sbjct: 2 IRFASLG-SGSAG-NALLVEHGATC----LMLDCG--------FGLRETVTRLQRLGRQP 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L I +TH H DH G + L +P++ + G I + Sbjct: 48 ADLAGILVTHEHGDHVGGVFRLARKFGLPIWMTHGTWGACRD------DGDGIDLRIIDS 101 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 VG I V H E + V + D Sbjct: 102 HRSFTVGDLEILPFPVPHDAREPVQYVFSGAGRRLGVLTDIG 143 >gi|241764337|ref|ZP_04762365.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|241366293|gb|EER60836.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 262 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 52/160 (32%), Gaps = 16/160 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N + + +++DCG G+ + + Sbjct: 2 LRFRSLG-SGSSG-NATVVEASDGLRVRRLLVDCG--------FGIRQLATRLGTAGLRI 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + AIFITH H DH G + + +PV+ S Sbjct: 52 DEIDAIFITHEHSDHIGCVQAVALRHRIPVWMSAGTYA------AMGSPDLDGLLHEAHD 105 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +D+GA S+ V H E + L ++ D Sbjct: 106 MAAIDLGALSLRPFTVPHDAREPLQLHCSDGAHHLGILTD 145 >gi|296134936|ref|YP_003642178.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] gi|295795058|gb|ADG29848.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] Length = 460 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 68/461 (14%), Positives = 134/461 (29%), Gaps = 84/461 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ + + K ++IDCG+ +L + D F + K++ + +THAH Sbjct: 10 RNVTGSCHLLHAQGKRVLIDCGMFQGSHELDEENAE--DFGF---DPKSIDLLLLTHAHL 64 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC----------- 120 DH G + L + + L A E + Sbjct: 65 DHCGRIPLLVKRGFRGEIITTAATRELTRVVLLDAAHLQEEEAERNTRHAHRRGDAQAQP 124 Query: 121 ---------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + G +++ S H I + ++ I + Sbjct: 125 LYTTLDALNALEFFGRTAVYGQTLELAPGLSATFFDAGH-ILGSASIRIEQTASGAHRSV 183 Query: 165 DWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 + D + + D +++ ++T R E I + I + Sbjct: 184 IFSGDLGNGGHAVLRDPQL-----PPRADSVVMETTYGDRLHK-PIEPSIAELFAAISET 237 Query: 224 AK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K G V++ TF+ + R + I+ + G + L +L + + I ++F Sbjct: 238 LKRGGNVVIPTFA--LERAQEILFYLRE-GIEAGKLPRTLAVFLDSPMA---ISATEIFR 291 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA 341 + L + P + + + +L ++ S G V Sbjct: 292 HHPECYGNAIDALFRAGSDPFSLPGLRFTREAADSIALNRLVGGAVIMAGSGMATGGRVR 351 Query: 342 IGHIKNRLVEQGVRVIAEDA---------------------ECPVHV--------SGHPY 372 N + V A E PVH S H Sbjct: 352 HHLRHNLGRHESSVVFVGYAARGTLARLLIDGAKKVKLFGEEIPVHARLYTINGFSAHAD 411 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 +L Q ++P+ + +HG+P + A L + Sbjct: 412 QRELLAWQQALKPEQTILVHGDPHSMDAFAALLKNTRVQRP 452 >gi|295109831|emb|CBL23784.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus obeum A2-162] Length = 265 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 77/224 (34%), Gaps = 23/224 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S +++D G+S + L +DL ++L I ITH Sbjct: 12 GNCIYVG----SENTHVLVDTGISGKKMEAGLNSLDLT----------GRDLDGILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+Y + + + + + + ++G ++ Sbjct: 58 HSDHIKGLGVISRKYGIPIYTTGGTVDAM-VRTNALGKIPDGIFHEIKEDEPFEIGDLTV 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + H + + + ++ D +D I+ ++ + D+L N I L Sbjct: 117 NPFSIPHDAAQPVGYRLECDGHSVGIATDLGKYNDYIIENLQNLDALLLEANHDIRML-- 174 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 R + ++ + + + + G +L ++ I Sbjct: 175 ---QVGRYPYYLKQRILGERGH-LSNENAGRLLCRLLHDNMKAI 214 >gi|270159696|ref|ZP_06188352.1| metallo-beta-lactamase domain protein [Legionella longbeachae D-4968] gi|289165528|ref|YP_003455666.1| metallo-beta-lactamase family protein [Legionella longbeachae NSW150] gi|269988035|gb|EEZ94290.1| metallo-beta-lactamase domain protein [Legionella longbeachae D-4968] gi|288858701|emb|CBJ12601.1| putative metallo-beta-lactamase family protein [Legionella longbeachae NSW150] Length = 452 Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 76/257 (29%), Gaps = 50/257 (19%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I++DCG+ F +L + + +N+ + +THAH DH G + Sbjct: 17 YLVQTENMKILVDCGL-FQGYK----ELRLRNWASLPVNPQNINYVLLTHAHIDHSGYIP 71 Query: 86 DLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCISFQAGDKVD------ 130 L + + L + + K + Sbjct: 72 LLVRNGFRGKIICTEGTYDLCKILLPDSGHLHEEEANYANKKNYSKHHPALPLYTREDAE 131 Query: 131 -----------------VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 F H I + I +++ +GD D I Sbjct: 132 RSLNYFQPTDLNKPFKIHKDFYASFHYAGH-ILGASFIQICHHNISVLFSGDLGRTQDPI 190 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TCISEKGIKKNIYDIMKNAKGCVLVTT 232 + L+ +ST R EK + + I +K G VL+ Sbjct: 191 MNPP--------QAPIESSYLVVESTYGNRSHDKTDPEKQLGEVINRTVKRG-GIVLIPA 241 Query: 233 FSSSVSRIRSIIDIAEQ 249 F+ V R +S++ +Q Sbjct: 242 FT--VGRTQSLLYYIQQ 256 >gi|56964264|ref|YP_175995.1| hypothetical protein ABC2499 [Bacillus clausii KSM-K16] gi|56910507|dbj|BAD65034.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 209 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 28/210 (13%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ ++ D PG D + +I +++ Sbjct: 5 IPLGPLQ---TNAYVL---YNEKKEAVLFD----------PGGDGA-AFVNWIREQKLTP 47 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG-LLE------AKRVYERVSKKIPCI 121 AI +THAH DH GAL ++ PVY LL+ A+ + + K Sbjct: 48 QAILLTHAHFDHIGALEEVRQAFACPVYLHEAEKQWLLDPLKNGSARMGRQPIKTKPADH 107 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD--DAILGDVTD 179 + + VG+FS + P +++ + NIV +GD + Sbjct: 108 LLKDEGTLKVGSFSFKLFHTPGHSPGSVSYYV--ADENIVFSGDALFQQGIGRTDLFGGN 165 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + L + +L L ++ A G + Sbjct: 166 HELLVQSIHNKLLTLPEETIVASGHGPLTT 195 >gi|295094862|emb|CBK83953.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Coprococcus sp. ART55/1] Length = 265 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 21/220 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 N G +S +++D G+S + ++ + + P L + +TH H Sbjct: 12 GNCYYVG----NSDTHLLVDVGISCKRVENALKDEGIKP---------SELDGVLVTHEH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L VP+YA+ I ++ K + + +K+ + +++ Sbjct: 59 IDHVKGIGVLARKHGVPIYATAGTIAEMK-KMTSLGSIDEGLFHEIRPDEKILIKDITVD 117 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + H + + + + D +D I+ + + D + N + L Sbjct: 118 PSSIWHDAADPVCYSLYGDGKKVSIATDMGNYNDYIVDKLDNSDIMVVEANHDVRMLEAG 177 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 ++ I N + G ++ + V Sbjct: 178 ------PYPYYLKRRILGNYGHLSNELSGQLIYRLLNDHV 211 >gi|6689354|emb|CAB65453.1| VicX protein [Streptococcus pyogenes] Length = 270 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I ++ Sbjct: 8 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRK 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + H+ +YA+ L++ FQ Sbjct: 52 PEDLDAILITHEHSDHIKGVGVMARKYHLDIYANEKTWQLMDE-CNMLGKLDASQKHIFQ 110 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + G IES V+H + I + V D + D + + D Sbjct: 111 RDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENAD 167 >gi|229828894|ref|ZP_04454963.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] gi|229792057|gb|EEP28171.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] Length = 245 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 15/163 (9%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 M+D G+S K G++ D+T + ++ AI +TH H DH L L H+P+ Sbjct: 1 MVDAGIS-AKRIEAGLNSF--DMTSL-----DMDAILLTHEHSDHISGLGVLARKYHLPI 52 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 YA+ I + KR + +G I + ++H + +A +R Sbjct: 53 YATQGTIDAVATKRSL-GTIDPSLYHVIRPDQTFTIGDMEICPMHISHDAADPVAYTMRQ 111 Query: 156 P----VGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGIL 192 + D D D L A + +L Sbjct: 112 RTEDGDKRVAVCTDLGAYDDYTIERLQGMDAMLLEANHDVKML 154 >gi|149180959|ref|ZP_01859460.1| YycJ [Bacillus sp. SG-1] gi|148851243|gb|EDL65392.1| YycJ [Bacillus sp. SG-1] Length = 264 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + + I ++ K+L I +TH H DH + Sbjct: 17 IYVETDQNSFLVDAGLSGKQMEAL--------FQKIDRKIKDLTGILVTHEHSDHIKGIG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L ++P+YA+ +A F G+ IES V+H Sbjct: 69 ILARKYNLPIYANEKTW---KAMDPLIGNVPTEQKFEFGMEKVQSFGSLDIESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL------MCDST 199 E M +V D D + G +++ ++ N + L Sbjct: 126 AEPMFYTFHHEGRKLVLVTDTGYVSDRMKGIISNANTYVFESNHDVDMLRMCRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + ++ + + + S Sbjct: 186 RILSDVGHVSNEDAAIAMSEVFGDQTKSIYLAHLSKD 222 >gi|251781985|ref|YP_002996287.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390614|dbj|BAH81073.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 269 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + H+ VYA+ L++ + FQ Sbjct: 51 PEDLDAILITHEHSDHIKGVGVMARKYHLDVYANEKTWQLMDER-NMLGKLDASQKHIFQ 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + G IES V+H + I + V D + D + + D Sbjct: 110 RDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENAD 166 >gi|146294421|ref|YP_001184845.1| beta-lactamase domain-containing protein [Shewanella putrefaciens CN-32] gi|145566111|gb|ABP77046.1| beta-lactamase domain protein [Shewanella putrefaciens CN-32] Length = 478 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 72/457 (15%), Positives = 140/457 (30%), Gaps = 97/457 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ G + + E +++ A Sbjct: 6 LGATREVTGSCHLL----SVDHEHLLLDCGLI-----QGGKEDELRNHDPFTFEPESISA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P+Y L ER +KK Sbjct: 57 VVLSHAHIDHSGRLPLLVKSGFDGPIYTHKATAELCAIMLKDAAMLQSRDTERTNKKRTK 116 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR--- 154 + + + + I H I + + I Sbjct: 117 HDLEPLEPLFTVEDVEQVMRQFIPLEYGQVINVIPHVDICLSDAGH-ILGSALVEIWLGE 175 Query: 155 -SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 IV +GD IL + T D+ ++ +ST R ++ Sbjct: 176 GKSQKKIVFSGDLGRAGMPILHNPTLVDT--------ADLVLMESTYGDRFHRSWTDTLA 227 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG--------RKIVLLGSSLKR 263 +K + + G +L+ FS V R + ++ + R + +++ Sbjct: 228 ELKAIFTKAVTESHGNILLPAFS--VGRAQELLYLFHLYAKEWDLSRWRICLDSPMAIEA 285 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LS 313 + ++ +D + +S G +P + I T + + + + + Sbjct: 286 TRVYVNNYQLMDEDFKHFTRQSPGKHPLLSNVEFIQTTEESIALNDIHKGLIIIAGSGMC 345 Query: 314 RG-------EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 G E + + +R PG + + E + + + Sbjct: 346 NGGRIRSHFEHNLWRPECDVIICGYQARGTPG-----RALVDGAEELTIHGNSIKVAAKL 400 Query: 366 HV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H S H +L Y +P LV +HGEP Sbjct: 401 HTVGGLSAHADQAELLHWYYHFDDQPP-LVLVHGEPE 436 >gi|319651059|ref|ZP_08005193.1| YycJ protein [Bacillus sp. 2_A_57_CT2] gi|317397229|gb|EFV77933.1| YycJ protein [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 11/143 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + ++D G+S + G+ I ++ L I +TH H DH + Sbjct: 17 IFVETEEHSFLVDAGLS--GKQMEGL------FQHIGRDIGKLSGILVTHEHSDHIKGVG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L ++P+YA+ ++ F G+ IES V+H Sbjct: 69 ILARKYNLPIYANEKTWLAMDGLI---GQVPVDQKFHFDMETVKTFGSLDIESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 + M V +V D Sbjct: 126 ADPMFYVFHHNGKKLVLITDTGY 148 >gi|197333993|ref|YP_002154917.1| cleavage and polyadenylation [Vibrio fischeri MJ11] gi|197315483|gb|ACH64930.1| cleavage and polyadenylation [Vibrio fischeri MJ11] Length = 482 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMKERKNLM 69 GG + + + I+IDCG+ +D D G + DI F + L Sbjct: 18 GGKLGVTGSCHELCINHNGNNHGILIDCGLFQGRDAKDKNGNERKL-DIEFPISH---LK 73 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 A+ +TH H DH G L L + P+Y +P L+ Sbjct: 74 ALILTHTHIDHIGRLPWLLAKGFKQPIYCTPATAELVPLMLDD 116 >gi|224131352|ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|222861836|gb|EEE99378.1| predicted protein [Populus trichocarpa] Length = 382 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 108/348 (31%), Gaps = 47/348 (13%) Query: 55 FPDITFIMK--ERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 PD F + + F+TH H DHYG L WS P+Y +P LL Sbjct: 49 IPDTGFSVDAFRYGPIPGCSAYFLTHFHYDHYGGLTKGWSH--GPIYCTPLTARLLTICL 106 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKL 168 + + + + + + NH P L R P +HTGD++ Sbjct: 107 S----LNSLYIHPLELDTEYVIQGVKVTLLEANH-CPGAALLHFRLPTGLCYLHTGDFRA 161 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---- 224 + + N + L D+T + S++ + + + K++ Sbjct: 162 SKLMQAHPL--------LANNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRVTKSSLKKQ 213 Query: 225 -KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 K V+V +S + + + I++ +G KI +S +R++ + D Sbjct: 214 PKTLVVVGAYS--IGKESVYLAISKALGVKIYAN-NSRRRILQSFGWPDLSTNLCTKAID 270 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIG 343 + P L + L + +G Sbjct: 271 TCLHVLPISSLRY------ETLKDYLKNHVNQYAAVLAFRPTGWTYS---------EGLG 315 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + V S H +L+ ++++P ++ Sbjct: 316 RELDLIRP---STRGNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPT 360 >gi|153002333|ref|YP_001368014.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS185] gi|151366951|gb|ABS09951.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS185] Length = 480 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 69/455 (15%), Positives = 137/455 (30%), Gaps = 93/455 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L + +++DCG+ D+L D D +++ Sbjct: 8 LGATEEVTGSCHLL----SVDHEHLLLDCGLIQGGKADELRNHDPFAFDP-------ESI 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKI 118 A+ ++HAH DH G L L P+Y L ERV+KK Sbjct: 57 SAVVLSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQTRDTERVNKKR 116 Query: 119 PCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR- 154 + + + + I H I + + + Sbjct: 117 AKHDLEPLEPLFTVEDAEQAITQFVPLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWL 175 Query: 155 ---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 +V +GD IL + T D+ ++ +ST R +E Sbjct: 176 GEGKSQKKVVFSGDLGRAGMPILRNPTLVDT--------ADLVLMESTYGNRFHRSWTET 227 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVS 266 +K + ++G +L+ FS V R + ++ + ++ LG L ++ Sbjct: 228 LAELKDIFAKTVNESQGNILLPAFS--VGRAQELLYLFHLYAKE-WDLGRWKICLDSPMA 284 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + L D + + + + + + + + Sbjct: 285 IEATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFIQTTEESMALNEVHKGLIIIAGS 344 Query: 327 TVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV 367 + R E + + + + E + + +H Sbjct: 345 GMCNGGRIRSHLEHNLWRPECDVIICGYQALGTPGRALVDGVEELTIHGNSIKVAAKLHT 404 Query: 368 ----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +L R Y+ +P L+ +HGEP Sbjct: 405 VGGLSAHADQAELLRWYRHFEGQPP-LILVHGEPE 438 >gi|15674630|ref|NP_268804.1| hypothetical protein SPy_0530 [Streptococcus pyogenes M1 GAS] gi|19745652|ref|NP_606788.1| hypothetical protein spyM18_0596 [Streptococcus pyogenes MGAS8232] gi|21909910|ref|NP_664178.1| VicX protein [Streptococcus pyogenes MGAS315] gi|28896391|ref|NP_802741.1| hypothetical protein SPs1479 [Streptococcus pyogenes SSI-1] gi|56808930|ref|ZP_00366638.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pyogenes M49 591] gi|71903091|ref|YP_279894.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|71910250|ref|YP_281800.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94988067|ref|YP_596168.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94989947|ref|YP_598047.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94991953|ref|YP_600052.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94993853|ref|YP_601951.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|139474238|ref|YP_001128954.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|209559001|ref|YP_002285473.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes NZ131] gi|306827820|ref|ZP_07461090.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pyogenes ATCC 10782] gi|13621743|gb|AAK33525.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19747783|gb|AAL97287.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|21904098|gb|AAM78981.1| VicX protein [Streptococcus pyogenes MGAS315] gi|28811642|dbj|BAC64574.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71802186|gb|AAX71539.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS6180] gi|71853032|gb|AAZ51055.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94541575|gb|ABF31624.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS9429] gi|94543455|gb|ABF33503.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94545461|gb|ABF35508.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94547361|gb|ABF37407.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|134272485|emb|CAM30748.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|209540202|gb|ACI60778.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes NZ131] gi|304429990|gb|EFM33029.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pyogenes ATCC 10782] Length = 269 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + H+ +YA+ L++ FQ Sbjct: 51 PEDLDAILITHEHSDHIKGVGVMARKYHLDIYANEKTWQLMDE-CNMLGKLDASQKHIFQ 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + G IES V+H + I + V D + D + + D Sbjct: 110 RDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENAD 166 >gi|303237430|ref|ZP_07323996.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] gi|302482380|gb|EFL45409.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] Length = 267 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 14/161 (8%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F+ LG G G N L + I IDCG+ G+ V + Sbjct: 3 KFMSLG-SGSSG-NAYLL----YTDTDCIAIDCGL--------GIRTVKKHFHSYGLQLS 48 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I ITH H DH ++ L + +PVYA+ + ++ + G Sbjct: 49 MINNIIITHDHADHVKSVGSLSTDYDIPVYATKMVHEGINRNWCVKKKVAPSMVRFIEKG 108 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + +G F + + V H + + I N D Sbjct: 109 ETKQIGEFKVTAFAVPHDSCDCVGYSIECEGVNFTIVTDCG 149 >gi|160892681|ref|ZP_02073471.1| hypothetical protein CLOL250_00211 [Clostridium sp. L2-50] gi|156865722|gb|EDO59153.1| hypothetical protein CLOL250_00211 [Clostridium sp. L2-50] Length = 267 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 23/224 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S +++D GVS + L +D ++ +L I +TH Sbjct: 12 GNCYYVG----SEETHLLVDAGVSGKKIESALNEID----------RKPSDLNGILVTHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+Y + I ++ K + + + SI Sbjct: 58 HIDHVKGLGVMARKHGIPIYTTGGTISEIK-KMSSVGTIDDSLFHEIEPDEPFFINDLSI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 ++ + H + + I D D+ ++ + + D + N I L Sbjct: 117 DASAIWHDAADPVCYSISDGKSKFSIATDMGNYDEYVVNKLKNSDIMVIEANHDIRMLQA 176 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ I N + G ++ +S + I Sbjct: 177 G------PYPYYLKQRILGNRGHLSNERSGQLIKALLNSHIKAI 214 >gi|312127057|ref|YP_003991931.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777076|gb|ADQ06562.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 198 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 72/189 (38%), Gaps = 30/189 (15%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ V ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATKIESVI------VENGLVPRAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRVYERVSKKIPCIS---FQAGD 127 +TH H DH+ L +PVYA +L A + + +I F+ GD Sbjct: 51 LTHGHFDHFMGCSYLKQRFKLPVYAHKAEKEILSNPAYNLSYLIGSEIKITCDGYFEDGD 110 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCA 185 + FS++ + P + + NI+ +GD +K ++D L Sbjct: 111 VFEFADFSLKVLYTPGHTPGSSCFL----YDNILFSGDTLFKDSFGRCDLPFGNEDKLFE 166 Query: 186 IGNEGILAL 194 E +L L Sbjct: 167 SIKEKLLVL 175 >gi|319763536|ref|YP_004127473.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC] gi|317118097|gb|ADV00586.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC] Length = 470 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 69/484 (14%), Positives = 129/484 (26%), Gaps = 85/484 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG E+ + L ++DCG+ G + Sbjct: 1 MKLKF--LGAAREVTGSCFLVEAAGLR----FLVDCGMV-----QGGSAAAARNREPFPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 + + + +THAH DH G L L +Y +P + LL Sbjct: 50 DPAAIDFVLLTHAHIDHSGLLPKLTRAGFKGAIYTTPATVDLLGVMLPDSAHIQESDAKR 109 Query: 106 -----EAK--------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 K R + + H I + + Sbjct: 110 SAKRFRGKDPLPPLYTLQDARECLQQVRGIEYDREFAPRVGVRARFRDAGH-ILGSAIIE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--T 206 + +V +GD + IL D T E L+ +ST R+ Sbjct: 169 VWVTEYGYPTKLVFSGDLGQPERPILRDPT--------PIEDADILVIESTYGNRQHKDF 220 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSS 260 +E+ + + + G V+V F+ V R + ++ ++ + V + S Sbjct: 221 SATEEEMIGIVEKTLFERGGNVIVPAFA--VGRTQEVLYHLHRLTSEGRLRQPRVFVDSP 278 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-------------- 306 + + + D+ + + T S E Sbjct: 279 MATEATRITREHLELFDEQAKRLAGWHARGENLPYLHFTESADESMALNQIRSGAIIISA 338 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 S + R + + + + +H Sbjct: 339 SGMCDAGRIRHHLRHNLPRKECSVLFSGFQAQGTLGRQLVDGAARVRIFGDDIPVRAAIH 398 Query: 367 ----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 +S H L + + P+ +HGEP A EL Q+ V G+ Sbjct: 399 SVDGLSAHADQPALMAWARGFKQAPEQTFVVHGEPSAAQALAELLQQQLGWQVSVPERGR 458 Query: 421 MLRL 424 ++ Sbjct: 459 VVPW 462 >gi|289579421|ref|YP_003478048.1| beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289529134|gb|ADD03486.1| beta-lactamase domain protein [Thermoanaerobacter italicus Ab9] Length = 259 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 11/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I+ID G+S ++ + I K+L AI ITH H+DH L ++P Sbjct: 24 ILIDAGLSGRT-----IERALLN---IGVNPKSLSAILITHEHKDHIKGAGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ G +E K+ + + ++G I + H E + + Sbjct: 76 IYANKATWGAMEKDIKEISEKNKLYFTTGEE---FEIGEIKIVPFKKPHDAVEPVGFSFK 132 Query: 155 SPVGNIVHTGDWKL 168 I D Sbjct: 133 CGDKKISIATDLGY 146 >gi|125718370|ref|YP_001035503.1| beta-lactamase superfamily hydrolase [Streptococcus sanguinis SK36] gi|125498287|gb|ABN44953.1| Metal-dependent hydrolase, beta-lactamase superfamily I, putative [Streptococcus sanguinis SK36] Length = 266 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IDRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHVFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|50913817|ref|YP_059789.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|50902891|gb|AAT86606.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS10394] Length = 269 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + H+ +YA+ L++ FQ Sbjct: 51 PEDLDAILITHEHSDHIKGVGVMARKYHLDIYANEKTWQLMDE-CNMLGKLDASQKHIFQ 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + G IES V+H + I + V D + D + + D Sbjct: 110 RDKVLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENAD 166 >gi|253700508|ref|YP_003021697.1| beta-lactamase [Geobacter sp. M21] gi|251775358|gb|ACT17939.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 257 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 14/137 (10%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + ++ID G+S + ++ I + L I ITH H DH + Sbjct: 18 ETDACRLLIDAGLSGRET--------IARLSSIGVDAATLDGILITHEHTDHIRGVGATA 69 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 L +PV S + V ++ + F+ G SI+ V H + Sbjct: 70 RRLKLPVLGSAHTLQAAR------HVIGRVDYVEFEPGTPFVFKGVSIDPFPVTHDACDP 123 Query: 149 MALVIRSPVGNIVHTGD 165 + I S G I D Sbjct: 124 VGYRIESGEGGIGFATD 140 >gi|160877057|ref|YP_001556373.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS195] gi|160862579|gb|ABX51113.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS195] gi|315269261|gb|ADT96114.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS678] Length = 480 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 69/455 (15%), Positives = 137/455 (30%), Gaps = 93/455 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L + +++DCG+ D+L D D +++ Sbjct: 8 LGATEEVTGSCHLL----SVDHEHLLLDCGLIQGGKADELRNHDPFAFDP-------ESI 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKI 118 A+ ++HAH DH G L L P+Y L ERV+KK Sbjct: 57 SAVVLSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQTRDTERVNKKR 116 Query: 119 PCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR- 154 + + + + I H I + + + Sbjct: 117 AKHDLEPLEPLFTVEDAEQAITQFVPLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWL 175 Query: 155 ---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 +V +GD IL + T D+ ++ +ST R +E Sbjct: 176 GEGKSQKKVVFSGDLGRAGMPILRNPTLVDT--------ADLVLMESTYGNRFHRSWTET 227 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVS 266 +K + ++G +L+ FS V R + ++ + ++ LG L ++ Sbjct: 228 LAELKDIFAKTVNESQGNILLPAFS--VGRAQELLYLFHLYAKE-WDLGRWKICLDSPMA 284 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + L D + + + + + + + + Sbjct: 285 IEATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFIQTTEESMALNEVHKGLIIIAGS 344 Query: 327 TVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV 367 + R E + + + + E + + +H Sbjct: 345 GMCNGGRIRSHLEHNLWRPECDVIICGYQALGTPGRALVDGVEELTIHGNSIKVAAKLHT 404 Query: 368 ----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +L R Y+ +P L+ +HGEP Sbjct: 405 VGGLSAHADQAELLRWYRHFEGQPP-LILVHGEPD 438 >gi|256752953|ref|ZP_05493780.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256748161|gb|EEU61238.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 210 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 25/190 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + R+ I+ID P + + +I+ N+ I +TH H Sbjct: 12 GANCYIVS--DEEEREAIVID-----PGEYSSEIQ------DYIVTNNLNVKYILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + +L V S +L + VY+++ I GD + Sbjct: 59 FDHIGGVEELKKLTQARVAISKEDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYF 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G + +E + + I + + TGD D +L Sbjct: 119 GKYKVEILHTPGHTKGGVCFKIDN----VCFTGDTLFKGSIGRHDFPGGDFSTLRDSIKN 174 Query: 190 GILALMCDST 199 +L L D T Sbjct: 175 KLLVLGNDVT 184 >gi|329954911|ref|ZP_08295928.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] gi|328527015|gb|EGF54026.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] Length = 267 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V ++ + Sbjct: 1 MKVRFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRIIKKGLKEA 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+F+TH H DH A+ L L++P+Y + E +++K+ Sbjct: 45 GINMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYT---TARIHEGINKSYCMTEKLHSS 101 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F IES V H + + I D Sbjct: 102 VRYLEKQQPMQLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|170290317|ref|YP_001737133.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174397|gb|ACB07450.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 415 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 78/421 (18%), Positives = 136/421 (32%), Gaps = 51/421 (12%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP--------GVD-----LVFPD 57 L G IG N G K ++ D G+ F G+ V P Sbjct: 5 LSGENSIGGNFVRIRDG----DKTLVFDQGIRFDIMSRYYSMQVTPQGIAELRRLGVIPK 60 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 + M I+I+H H DH G LH++ S VY + + E + S Sbjct: 61 QEWYMDAS----GIYISHMHLDHLGLLHNIPSETR--VYLPSLS--VYEDMKERWENSSS 112 Query: 118 IPCIS--FQAGDKVDVGAFS-----IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + + ++ + + V+HS A + G I++TGD+++D Sbjct: 113 WLQLVAGRYFLEIREIKPLEEDENGVIPLPVSHSAYPAYAFLYFGREGTILYTGDFRVDG 172 Query: 171 DAILGDVTDKDS------LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 + L + + L+ + TN T IS + I I + Sbjct: 173 FLGEERFLELIGEDLLTYLGENPDVRVDTLIIEGTNVGSNRTPISPDDVANMIRRIAISQ 232 Query: 225 KG---CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K +L T I++IA+++G +A + I + + + Sbjct: 233 KSSQAPMLFTLHGLDFEYAYLILEIAKELGFDC------YVASAQIAKLLERIPEPPVEI 286 Query: 282 SD-ESFGLYPREQLIVIATGSQGEPR-SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 + E F YP + V G + +R+ + + P E Sbjct: 287 NLVEDFVRYPTMREKVSLEEIGGNSFILTSHREIVDLLRDPSFRPAMRSPVAVLSEP--E 344 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLV 399 + V + SGH YP L R+ +RP+ + IH + L+ Sbjct: 345 PEVEEALEYDVIANWLSAMGVQHYRMRASGHYYPYQLTRIMSVVRPKDVKPIHTKSPDLL 404 Query: 400 A 400 Sbjct: 405 K 405 >gi|317471916|ref|ZP_07931251.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316900689|gb|EFV22668.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 169 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S +++DCG+S + + + L I ITH H DH L Sbjct: 14 SIFVGSKETKLLVDCGIS--------AKRIEKSLDELDTRASELSGILITHEHSDHIKGL 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +PV+A+ I + R Y K +A + ++E+ V H Sbjct: 66 GVMLRRYGLPVFATAKTIDAVLDSR-YIGKVDKDLFHPIEADHPFQLDDITVEASHVWHD 124 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + + S D D+ + Sbjct: 125 AADPVCYSFCSEGFKASIATDLGDYDEYL 153 >gi|312864763|ref|ZP_07724994.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] gi|311099890|gb|EFQ58103.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] Length = 269 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++ID G+S K + I ++ ++L AI +TH H+DH + Sbjct: 19 SFYLETDKKKLLIDAGLSGKKITSLLAE--------IDRKPEDLDAILVTHEHKDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +P+YA+ ++A + +V + I F+ G + G IES V+H Sbjct: 71 GVLARKYGLPIYANEKTWQTMDAHNMIGKVDPEQKHI-FERGKVMTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A L + D Sbjct: 130 AIDPQFYRFMKDDKSFVMLTDTGYVSDRMAGLIENAD 166 >gi|269926058|ref|YP_003322681.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789718|gb|ACZ41859.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 267 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 20/140 (14%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGALH 85 K I+ID G+S K T++++ +NL+ IF+TH H DH + Sbjct: 4 QWEGKAILIDAGISARKLT-----------TYLLERNVSPENLLGIFVTHEHSDHIAGIE 52 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L PV + +L + + ++ +++ I++ + H Sbjct: 53 LLAKRFDTPVLCTEETRKVLSW------LIDGVEYEVYKKEQSIEIEGLEIQAFSLPHDA 106 Query: 146 PETMALVIRSPVGNIVHTGD 165 + + IR + D Sbjct: 107 ADPVGYQIRYGEYAVSVITD 126 >gi|251800209|ref|YP_003014940.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247547835|gb|ACT04854.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 268 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 17/174 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N + G K +++D G+ + ++ + D Sbjct: 3 LTFTVLG-SGSTG-NATIVSNG----DKMVLVDAGL-----SMKKIEELMRDQGV---SG 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+F+TH H DH L +P++A+ G +E + + + + Sbjct: 49 HQLSALFVTHEHSDHIKGLGAFARKYELPIFANEGTWGGMER---HVGNIEPEKRVIMET 105 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G+ + G + S ++H E + + D D + + D Sbjct: 106 GESLRFGTMEVCSYPISHDAAEPVGYTFVDNGEKLSLATDLGYMSDKVKQAIID 159 >gi|294010463|ref|YP_003543923.1| putative exonuclease [Sphingobium japonicum UT26S] gi|292673793|dbj|BAI95311.1| putative exonuclease [Sphingobium japonicum UT26S] Length = 486 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 71/460 (15%), Positives = 133/460 (28%), Gaps = 88/460 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L LG G + + Y I++D G+ F DL + + I Sbjct: 33 DGLGVAFLGASGTVTGS----RYLVDDGETQIVVDSGL-FQGPR----DLRRLNWSPIPP 83 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK----- 117 E ++ + +THAH DH GAL + V A+ L E ++ Sbjct: 84 EVADVGQVLLTHAHLDHSGALPRMARLGWDGTVLATRATAALCELLLPDSGHLQEKDAEF 143 Query: 118 ---------------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 I F A V G + R H I + Sbjct: 144 ANRHGFSRHQPALPLYTQADARLALQLFRPIEFGAWHAVTDG-IRVRYHRAGH-ILGAAS 201 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I I+ +GD D+++ D ++ +ST R + Sbjct: 202 IEIDWKGRTILFSGDIGRYGDSVMKDPEPPAR--------ADYVLVESTYGDRRHEQVDP 253 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI----------------------A 247 K + ++ ++ G V++ F+ V R++S++ Sbjct: 254 TKTLGDHVERCVERG-GTVVIPAFA--VGRVQSLLYHFSRLRAQGRLRDIPIFLDSPMAI 310 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEP 305 G + + + + P ++I+ A+G + G Sbjct: 311 NASGLMCDFMDEHRLARAECEAACSVAHYVREVEESKELTANPAPKVIISASGMATGGRV 370 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + + + + A+ G I I + V Sbjct: 371 LHHLKRFAPDGKNLILFSGFQAAGTRGAAMIGGARTI-KIHGEYIPVEAEVA-----NLT 424 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 +S H ++L R + P+ + HGEP + Sbjct: 425 MLSAHADSDELMRWLGSLHEAPRHVYVTHGEPTGAHVLAK 464 >gi|120597438|ref|YP_962012.1| beta-lactamase domain-containing protein [Shewanella sp. W3-18-1] gi|120557531|gb|ABM23458.1| beta-lactamase domain protein [Shewanella sp. W3-18-1] Length = 478 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 72/457 (15%), Positives = 140/457 (30%), Gaps = 97/457 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ G + + E +++ A Sbjct: 6 LGATREVTGSCHLL----SVDHEHLLLDCGLI-----QGGKEDELRNHDPFTFEPESISA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P+Y L ER +KK Sbjct: 57 VVLSHAHIDHSGRLPLLVKSGFDGPIYTHKATAELCAIMLKDAAMLQSRDTERTNKKRTK 116 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR--- 154 + + + + I H I + + I Sbjct: 117 HDLEPLEPLFTVEDVEQVMRQFIPLEYGQVINVIPHVDICLSDAGH-ILGSALVEIWLGE 175 Query: 155 -SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 IV +GD IL + T D+ ++ +ST R ++ Sbjct: 176 GKSQKKIVFSGDLGRAGMPILHNPTLVDT--------ADLVLMESTYGDRFHRSWTDTLA 227 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG--------RKIVLLGSSLKR 263 +K + + G +L+ FS V R + ++ + R + +++ Sbjct: 228 ELKAIFTKAVTESHGNILLPAFS--VGRAQELLYLFHLYAKEWDLSRWRICLDSPMAIEA 285 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LS 313 + ++ +D + +S G +P + I T + + + + + Sbjct: 286 TRVYVNNYQLMDEDFKHFTRQSPGKHPLLSNVEFIQTTEESIALNDIHKGLIIIAGSGMC 345 Query: 314 RG-------EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 G E + + +R PG + + E + + + Sbjct: 346 NGGRIRSHFEHNLWRPECDVIICGYQARGTPG-----RALVDGAEELTIHGNSIKVAAKL 400 Query: 366 HV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H S H +L Y +P LV +HGEP Sbjct: 401 HTVGGLSAHADQAELLHWYHHFDDQPP-LVLVHGEPE 436 >gi|312128230|ref|YP_003993104.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311778249|gb|ADQ07735.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 265 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 28/198 (14%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++E++F PL G G N L Y I++D GVSF K Sbjct: 2 SDEMLFCPLYSGSSG----NSILISY----KDTSIIVDAGVSFKKLAQ-----------A 42 Query: 61 IMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + K K + AI ++H H DH + L+VP+ + +++ + Sbjct: 43 LEKIGFNKKIDAILLSHDHSDHVKCAGIYFRKLNVPIITNYKTWESIKSSL---GKVDES 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGD 176 + G VG+ I++ + H + M + D D A + D Sbjct: 100 YVKLIETGTSFSVGSIGIDTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMID 159 Query: 177 VTDKDSLCAIGNEGILAL 194 +D L + + +L Sbjct: 160 FSDIILLESNHDVEMLMF 177 >gi|228477473|ref|ZP_04062109.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus salivarius SK126] gi|228250908|gb|EEK10096.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus salivarius SK126] Length = 270 Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 20 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F + G IES V+H Sbjct: 72 GVLARKYGMDIYANEKTWQIMDSK-NMLGKIDNTQKHVFSRDKLLTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A + + D Sbjct: 131 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENAD 167 >gi|94310015|ref|YP_583225.1| beta-lactamase-like protein [Cupriavidus metallidurans CH34] gi|93353867|gb|ABF07956.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Cupriavidus metallidurans CH34] Length = 262 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 30/240 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L +S +++DCG G+ + + Sbjct: 2 MRFAFLGSGSE--GNSLLIEASDGASVTRVLLDCG--------FGIKETARRLERLGVAP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L A+ +TH H DH G+ + + +PV+ S L + R + A Sbjct: 52 EQLDAVLVTHEHGDHVGSAYAFAARYKLPVHTSHGTW-LATSHM---RGADVADVRVCCA 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 VG I V H E + V+ + D VT L Sbjct: 108 DHSFSVGGLQIHPYTVPHDAREPLQFVLTDGDARLG----VLTDAGMETPYVT--ARLA- 160 Query: 186 IGNEGILALMCDSTNA-----MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G+ +L+ + + ++ I + + + +L +SR+ Sbjct: 161 ----GVHSLVLECNHDREMLRNSVYPYSLKRRIGGDFGHLANDIAASILSQVMHGQMSRV 216 >gi|291563490|emb|CBL42306.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [butyrate-producing bacterium SS3/4] Length = 265 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 9/158 (5%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + I+ID G+S + + G++ V + L I ITH H DH L Sbjct: 14 CIYTGTEESHILIDAGISAKRIEQ-GLNEVGLKTS-------ELDGICITHEHSDHVKGL 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L VP+YA+ + ++ + + +G +++ ++H Sbjct: 66 GVLARKYEVPIYATEGTLNEIKN-IKGLGEYPEELLHPILPDTEFALGDLTVKPFHIDHD 124 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +A I+S ++ D + + + D D+ Sbjct: 125 AADPVAYRIQSGNKSVAVATDLGHFNQYTVDHLLDLDA 162 >gi|148702077|gb|EDL34024.1| cleavage and polyadenylation specificity factor 3, isoform CRA_a [Mus musculus] Length = 261 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 36/188 (19%) Query: 46 DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIG 103 D LP +DL+ P + + I+H H DH GAL + + Sbjct: 1 DALPYIDLIDP---------AEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKA 51 Query: 104 LLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGAFSIESVRVNHSIP 146 + I + + +V H + Sbjct: 52 IYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VL 110 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 +I +++TGD+ +D L I N L+ +ST Sbjct: 111 GAAMFMIEIAGVKLLYTGDFSRQEDRHLMA-------AEIPNIKPDILIIESTYGTHIHE 163 Query: 207 CISEKGIK 214 E+ + Sbjct: 164 KREEREAR 171 >gi|260655710|ref|ZP_05861183.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] gi|260629627|gb|EEX47821.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] Length = 222 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ 111 + F+ R L AI +TH H DH + DL PVY + + + + Sbjct: 47 VEFLQNRRLKLGAILLTHGHMDHCLGVADLVEATGAPVYMARGDLNMTKDNWANLAVEFG 106 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 V P GD VG FS+ + P + ++ ++ +GD Sbjct: 107 REVPPYEPSKLLDEGDTFSVGRFSLTVLLTPGHTPGSCCYIVEKDGEKLLISGDTLFARS 166 Query: 172 --AILGDVTDKDSLCA 185 D ++L Sbjct: 167 IGRSDLRGGDSEALAR 182 >gi|270208655|ref|YP_003329426.1| hypothetical protein pSmeSM11ap128 [Sinorhizobium meliloti] gi|76880929|gb|ABA56099.1| conserved hypothetical protein [Sinorhizobium meliloti] Length = 531 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 13/111 (11%) Query: 1 MK-NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK + F G G + + L G+ I++DCG+ F +L + D Sbjct: 1 MKIEPTIRFH--GAAGTVTGSCQLVESGATK----ILVDCGL-FQGSKTEK-ELNYRDFP 52 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 F + K + A+ +THAH DH G L L P++A+P L Sbjct: 53 F---DPKTIDAVILTHAHIDHSGLLPKLARLGYDGPIFATPATTDLCSVML 100 >gi|167629091|ref|YP_001679590.1| beta-lactamase protein [Heliobacterium modesticaldum Ice1] gi|167591831|gb|ABZ83579.1| beta-lactamase protein [Heliobacterium modesticaldum Ice1] Length = 298 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N A + +++D G++ K G+ V D + AI +TH H Sbjct: 12 GNCAFVE----GKQTRLLVDAGLA-GKAVEKGLAAVGVDPR-------TIDAIVVTHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L +PVYAS ++ + KV + IE+ Sbjct: 60 DHIRGVGVLARRYKLPVYASEGCWEGMKHAI---GDVPEAQVRLIDPNKKVTLKNLEIEA 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 H + + I + D + + D Sbjct: 117 FPTPHDARAPIGMTIDDGDSRLGIATDIGYVTRGMGRRLID 157 >gi|71281021|ref|YP_269337.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] gi|71146761|gb|AAZ27234.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] Length = 451 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 77/485 (15%), Positives = 148/485 (30%), Gaps = 100/485 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE- 64 + LGG G + + Y +S I++DCG+ ++ Sbjct: 1 MNITFLGGTGTVTGS----KYFVETSTTKILVDCGLYQG-------------YKWLRARN 43 Query: 65 -------RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------- 105 K+L AI +THAH DH G + L+ VYA I L Sbjct: 44 REPLPLDLKSLDAIVLTHAHLDHSGFIPALYKQGFRGHVYAHQATISLCSILLPDSGHIQ 103 Query: 106 --------EAKRVYERVSKKIPCISFQA-----------GDKVDVGAFSIESVRVNHSIP 146 + K + + + ++ +G IE H I Sbjct: 104 EDDAKFYGKHKISRHENPEPLYDKATAEACLSLFKAVDFNEEFKIGDIEIELQSAGH-IL 162 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++++++ + +GD D + L+ +ST R Sbjct: 163 GAASVILKADGKRVGFSGDVG--------RPDDIIMYPPKPLPPVDLLLLESTYGNRLHD 214 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR---IRSIIDIAEQ-------------- 249 I + G +L+ +F+ V R ++ ++ + Sbjct: 215 KEDAFEQLAEIVNSTAKKGGALLIPSFA--VGRTEAVQHMLASLMKKELIPKLPVYLDSP 272 Query: 250 ---IGRKIVLLGSSLKR--VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQ 302 I L R + + ++ +I+ +G + Sbjct: 273 MAINVFNIYCEHFDLNRLSNEECLEMCNVATFTRTVDESKALSELIMPHIIIAGSGMATG 332 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G L +L G+ R L + S G ++ G N + + E Sbjct: 333 GRILHHLKRLL-GDYRTTVLFTG----YLSGGTRGAKMLAGK-DNVKIHGKWLPVKARVE 386 Query: 363 CPVHVSGHPYPNDLKRMYQWIR--PQV-LVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 +SGH D+ + Q + P+ ++ +HGEP + ++ +Q V + Sbjct: 387 VLNGLSGHGDYEDITQWLQISKLHPKTKVLLVHGEPEASESMRDHLMQHTQFDVDVAKYH 446 Query: 420 KMLRL 424 ++LRL Sbjct: 447 EILRL 451 >gi|217974921|ref|YP_002359672.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS223] gi|217500056|gb|ACK48249.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS223] Length = 480 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 69/455 (15%), Positives = 137/455 (30%), Gaps = 93/455 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L + +++DCG+ D+L D D +++ Sbjct: 8 LGATEEVTGSCHLL----SVDHEHLLLDCGLIQGGKADELRNHDPFAFDP-------ESI 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKI 118 A+ ++HAH DH G L L P+Y L ERV+KK Sbjct: 57 SAVVLSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQTRDTERVNKKR 116 Query: 119 PCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR- 154 + + + + I H I + + + Sbjct: 117 AKHDLEPLEPLFTVEDAEQAITQFVPLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWL 175 Query: 155 ---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 +V +GD IL + T D+ ++ +ST R +E Sbjct: 176 GEGKSQKKVVFSGDLGRAGMPILRNPTLVDT--------ADLVLMESTYGNRFHRSWTET 227 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVS 266 +K + ++G +L+ FS V R + ++ + ++ LG L ++ Sbjct: 228 LAELKDIFAKTVNESQGNILLPAFS--VGRAQELLYLFHLYAKE-WDLGRWKICLDSPMA 284 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + L D + + + + + + + + Sbjct: 285 IEATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFIQTTEESMALNEVHKGLIIIAGS 344 Query: 327 TVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV 367 + R E + + + + E + + +H Sbjct: 345 GMCNGGRIRSHLEHNLWRPECDVIICGYQALGTPGRALVDGVGELTIHGNSIKVAAKLHT 404 Query: 368 ----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +L R Y+ +P L+ +HGEP Sbjct: 405 VGGLSAHADQAELLRWYRHFEGQPP-LILVHGEPD 438 >gi|294101418|ref|YP_003553276.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] gi|293616398|gb|ADE56552.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] Length = 536 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 71/482 (14%), Positives = 134/482 (27%), Gaps = 105/482 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMKERKNL 68 LG GE+ + L G+ I++DCG+ D+ F+ +L Sbjct: 6 LGAAGEVTGSNYLIECGT----SRILVDCGIYQGKGDDEKNRAQ-----FDFV---PSSL 53 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPCI 121 A+ +THAH DH G + L V+A+ + L+ + + E K Sbjct: 54 NAVVLTHAHMDHSGRVPLLVQQGFKGKVWATLPTVELVNVLWQDSVRLMKEEAEWKTRKN 113 Query: 122 SFQ-------------------------AGDKVDVGA-FSIESVRVNHSIPETMALVIRS 155 + DK++V S+ H I + + I + Sbjct: 114 ERKGLPPVEPLYREEDAQKAAQLLTAATYDDKIEVAPGISVRFRDAGH-ILGSAIIEIWA 172 Query: 156 PVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 IV +GD + + + ++ +ST R S K Sbjct: 173 QEDGKEVKIVFSGDLGPQETVMERNPAIISR--------ADYVVIESTYGDRLHK--SNK 222 Query: 212 GIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI---------------------- 246 ++ ++ +A + V++ TF V R + ++ Sbjct: 223 ETREEFRQVIAHALKSRAKVMIPTFV--VDRAQRLLYELMLLQKDGILRNNIPIFFDSPM 280 Query: 247 ----AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 E + + L +++ V D ++ S + ++ GS Sbjct: 281 GVKATEIYNKHLSLFSREIQQHVKEGYDPFTPEQLHYVESVADSRRINDIKHAIVMAGSG 340 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 ++ V + +IF G + + + Sbjct: 341 ---MCNGGRIVHHLKHGVW-DPSNRIIFVGYQAKG--TLGRRMVDGEKTLRIAGEEVTVN 394 Query: 363 CPVHV----SGHPYPNDLKRMYQW--IRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +H S H +DL P V L + A VP Sbjct: 395 AQLHTINGFSAHGDRDDLLTWADNFETDPVFFVTHGEPKSSQALALALQKKNHRAVVPIA 454 Query: 417 RN 418 Sbjct: 455 GE 456 >gi|168334162|ref|ZP_02692371.1| beta-lactamase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 268 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 82/239 (34%), Gaps = 26/239 (10%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F+ +GG IG + Y + I++DCG + V + ++ Sbjct: 12 KFIAIGGGDHIGSS----SYYLEWNDLRILLDCGAESNNSSIINVQKT------LGEDFN 61 Query: 67 NLMAIFITHAHEDHYGAL--HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI I+HAH+DHYG L + + ++P + + + + Sbjct: 62 KLNAIIISHAHKDHYGGLFNNVFSDSHR--IISTPITKQKIRTCMPHNNLRINYIIETIY 119 Query: 125 AGDKVDV-----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 D +V G I + H I +I+ I++TGD+ L + Sbjct: 120 TFDYFEVFFAAHGNAQITFLPAGH-IDGAAMTLIQIDGKKILYTGDFSL--PLSTCEPFI 176 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKNAKGCVLVTTFSSS 236 K +L I + L+ + TN G S + I + + + + Sbjct: 177 KQTLKLI--RNLDILIIEGTNNRETGHKSSIKHARFNELYELIKFTYPQKIFLVHQNEN 233 >gi|326202096|ref|ZP_08191966.1| RNA-metabolising metallo-beta-lactamase [Clostridium papyrosolvens DSM 2782] gi|325987891|gb|EGD48717.1| RNA-metabolising metallo-beta-lactamase [Clostridium papyrosolvens DSM 2782] Length = 543 Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats. Identities = 79/498 (15%), Positives = 144/498 (28%), Gaps = 97/498 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++DCG F + V + Sbjct: 1 MNISFLGAAKTVTGSCYLVE----TKETKFLVDCG-MFQGK----ANEVLLNTEEFSFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 +L + +THAH DH G + L + VYA+ + L Sbjct: 52 GDLDFMLLTHAHIDHSGRIPKLHTDGFKGTVYATKPTVQLCGIMLPDSGHIQEMENEWTN 111 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDVG------------AFSIESVRVNHSIPETMALV 152 + KR E K + + + H I + L Sbjct: 112 RKRKRAGEPPVKPLYTLEEATDCLGLFKGVAYDEVISVSDDVRVRFKDAGH-ILGSAILE 170 Query: 153 IRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I N +V +GD IL D + L+ +ST R T Sbjct: 171 IWIRENNQETKVVFSGDLGNKGMPILR---DPSIIGD-----TDYLIVESTYGDRLHTLK 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 E + I+ G V++ +F+ V R + +I + + + G + ++ Sbjct: 223 KETDKIERFISIISETISKGGNVVIPSFA--VGRTQELIYDLNKH---MDVFGDKVNEIL 277 Query: 266 SVAIDVG-IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLA 323 +V + V + + E+ + E IA G +L S E R + Sbjct: 278 NVPVYVDSPLATSATKIFRENLDCFDEEAKAYIANGDNPLDFPSLKFTQSPEESRKLNEK 337 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA------------------------- 358 + +I S+ + H+K+ L + ++ Sbjct: 338 AESMIIISASGMCDAGRVKHHLKHNLWRKESTILFVGYQAEGTLGRKIQDGAKIVKLFGE 397 Query: 359 -----EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 E SGH L + I +P+ + +HGE + + E Sbjct: 398 EISVNARIESIDGFSGHADKEGLLSWIRSIGRKPKKIFVVHGEQGVAASFAQTITDELGL 457 Query: 412 CVPPVRNGKMLRLFPDPI 429 G+ + I Sbjct: 458 QCIVPSRGESYVISGGNI 475 >gi|296135911|ref|YP_003643153.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] gi|295796033|gb|ADG30823.1| RNA-metabolising metallo-beta-lactamase [Thiomonas intermedia K12] Length = 460 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 66/461 (14%), Positives = 133/461 (28%), Gaps = 84/461 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ + + K ++IDCG+ +L + D F + K++ + +THAH Sbjct: 10 RNVTGSCHLLHAQGKRVLIDCGMFQGSHELDEENAE--DFGF---DPKSIDLLLLTHAHL 64 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC----------- 120 DH G + L + + L A E + Sbjct: 65 DHCGRIPLLVKRGFRGEIITTAATRELTRVVLLDAAHLQEEEAERNTRHAHRRGDAQAQP 124 Query: 121 ---------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + G +++ S H I + ++ I + Sbjct: 125 LYTTLDALNALEFFGRTAVYGQTLELAPGLSATFFDAGH-ILGSASIRIEQTASGAHRSV 183 Query: 165 DWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 + D + + D +++ ++T R E I + I + Sbjct: 184 IFSGDLGNGGHAVLRDPQL-----PPRADSVVMETTYGDRLHK-PIEPSIAELFAAISET 237 Query: 224 AK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K G V++ TF+ + R + I+ + G + L +L + + + + + Sbjct: 238 LKRGGNVVIPTFA--LERAQEILFYLRE-GLEAGKLPRTLPVFLDSPMAISATEIFRHH- 293 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA 341 + L + P + + + +L ++ S G V Sbjct: 294 --PECYGNAIDALFRAGSDPFSLPGLRFTREAADSIALNRLVGGAVIMAGSGMATGGRVR 351 Query: 342 IGHIKNRLVEQGVRVIAEDA---------------------ECPVHV--------SGHPY 372 N + V A E PVH S H Sbjct: 352 HHLRHNLGRHESSVVFVGYAARGTLARLLIDGAKKVKLFGEEIPVHARLYTINGFSAHAD 411 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 +L Q ++P+ + +HG+P + A L + Sbjct: 412 QRELLAWQQALKPEQTILVHGDPHSMDAFAALLKNTRVQRP 452 >gi|239906709|ref|YP_002953450.1| hypothetical protein DMR_20730 [Desulfovibrio magneticus RS-1] gi|239796575|dbj|BAH75564.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 535 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 66/493 (13%), Positives = 135/493 (27%), Gaps = 95/493 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LG G + + L + IDCG+ + + +L D + Sbjct: 1 MKVKF--LGAAGTVTGSCHLIETATAR----FAIDCGMHQGNEVIERRNL---DTSVYKP 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 N+ +THAH DH G L + +Y +P LL +++ Sbjct: 52 R--NIDFFLLTHAHIDHSGLLPRMVKTGFSGKIYCTPPTKELLAIMLEDSAHIQEMEA-E 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSI-----------------PETMALVIRSPVGNIVHTG- 164 + + G ++E++ P + G+I+ + Sbjct: 109 WASRKSRRHGGRTVEALYTKADALAAAALLTPVPYGESFSPAPGITAVYHDAGHILGSAF 168 Query: 165 -DWKLDDDAILGDV---TDKDS----LCAIGNEGI--LALMCDSTNAMREGTCISE-KGI 213 + LD + + D L ++ + L + T R+ + + Sbjct: 169 IELSLDGNGKRTRMLFSGDLGRPDQLLVNDPDKPVESDYLFLEGTYGDRDHKNPQDSREE 228 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------------------------- 248 G V++ F+ V R + ++ Sbjct: 229 LAQAIRESYTRGGKVIIPAFA--VERTQEMLFCLHLLLKEGRIPADLPVFVDSPLAIKAT 286 Query: 249 ----QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQ 302 + + + + + ++ Q +++ A+G + Sbjct: 287 EIFRRNPAYLDAETRAYYDRGEDPLSLPNLRFTQTTDQSREINELKGPAIVIAASGMCNA 346 Query: 303 GEPRSALAQLSRGEMRNVKLAEK-DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 G + L + V F + PG I + + Sbjct: 347 GRVKHHL------RHNLWRPEAGIVFVGFQAMGTPG-----RKIVDGAKMIRILGEEVAV 395 Query: 362 ECPVHV----SGHPYPNDLKRMYQWIR---PQVLVAIHGEPLHLVAHKELALQEGIACVP 414 V+ S H + + + PQV + +HGE L L Q V Sbjct: 396 NAKVYTIGGFSSHAGQSQILAWLSHFKVNHPQVFL-VHGEQKSLETLAGLIRQRFGVKVR 454 Query: 415 PVRNGKMLRLFPD 427 + + L P Sbjct: 455 IPQYLEEYTLTPG 467 >gi|227829954|ref|YP_002831733.1| beta-lactamase domain-containing protein [Sulfolobus islandicus L.S.2.15] gi|227456401|gb|ACP35088.1| beta-lactamase domain-containing protein [Sulfolobus islandicus L.S.2.15] Length = 423 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 143/421 (33%), Gaps = 40/421 (9%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF------IMKERK 66 G EIG N + + ++ D G+ F + + P I+ Sbjct: 15 GYKEIGGNFIIIE----NKDNTLVFDQGIRFSRFKKYYNVNIQPSSASELRRLGIIPPSD 70 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI-------GLLEAKRVYERVSKKIP 119 I+I+H H DH G + L+V + + +E + + + I Sbjct: 71 EFNKIYISHLHLDHLG----ILHLLNV---GTLLHVPDKDTFNQFIEPYKESDNWTTYIS 123 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD------DDAI 173 + + ++V HS + + I+++GD +L D + Sbjct: 124 PPIGVNVIDIRDNQDGVLPLQVEHSAYPAYSFYYNNGDVRILYSGDLRLSSPLKVADQEL 183 Query: 174 LGDVTDKDSLCAIGNEGIL--ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + +K L G+ L+ + TN + + + + +I ++ V+ Sbjct: 184 HNRIHEKTLLEEYEERGLDTDVLIVEGTNFSSAISPLQPHYFNEQVNNIFESHSNSVITV 243 Query: 232 TFSS-SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + + ++ + ++ G+ V G L ++ S I + D+S Sbjct: 244 SIDPIDLEELAYLLLVTKEKGKIPVFSGRRLIKMASFWISKFNLIDKAYQFDDKSIEFEI 303 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 ++ +I + + L R ++ + VI S E ++ V Sbjct: 304 IDEEEIIRSPQDYVIFTVKGNLIDFGRRLSEIIKGSVVISLST-----ESKAESGEDESV 358 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL--HLVAHKELALQE 408 E + +SGH YP +L+ + ++I+P+ ++ IH + +L Sbjct: 359 EDNWYKALGFITYRLRISGHYYPYELRIILEYIKPKKVIPIHTDVPLTMCEYINKLGYSC 418 Query: 409 G 409 Sbjct: 419 A 419 >gi|85000301|ref|XP_954869.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303015|emb|CAI75393.1| hypothetical protein, conserved [Theileria annulata] Length = 663 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 79/580 (13%), Positives = 150/580 (25%), Gaps = 156/580 (26%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDLPG-- 50 M + ++ LG ++G + + + K ++ DCG +P L G Sbjct: 1 MNSVDITV--LGAGQDVGRSCVVVTF----PSKRVVFDCGAHCGFVDQRRYPDLQLLGDI 54 Query: 51 ------VDLV------------FPDITFIMKERKN------------------------- 67 + L+ PD F Sbjct: 55 NEYNHQIQLMGSVKKEEFEVKSVPDDPFSHDYSDKCAVKQEFDKDIYMKNALQKALRNVT 114 Query: 68 --LMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLL------------------ 105 + I+H H DH GAL L + P+Y S L Sbjct: 115 NSVDCSIISHFHLDHVGALPFLTEHIGYSGPIYLSYPTRALCPLLLRDSVQVTSTRTVPD 174 Query: 106 ----------------------------EAKRVYERVSKKIPCISFQAGDKVDV------ 131 K + S K + Sbjct: 175 DPNSISSINASVKSLLNSHTNATFTPDKRRKIEEKADPWGYTLNSVAECMKRSIPLQLRA 234 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 G ++ H + + +++TGD+ D LG + Sbjct: 235 TETVGNLNLVPYYAGH-VLGASMFLSECDGFKVLYTGDFNTIPDKHLGP-------AKVP 286 Query: 188 NEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 L+C+ST A R+ +E + +++ + N G VL+ F+ V R + + Sbjct: 287 TLEPDVLICESTYATFVRQSKRATEMELCTTVHETLING-GKVLIPVFA--VGRAQELAI 343 Query: 246 IAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I I G ++ + + + R L + Sbjct: 344 ILNNYWNNLSLSFPIYFGGGLSEKATNYYKLHSSWTNNNNITNLRENPFSLRNLLQFDQS 403 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTV-----------------IFSSRAIPGNEVAI 342 L + L ++ I GNE Sbjct: 404 FLNDNRPMVLFATPGMVHTGLSLKACKLWSQNPSNLILIPGYCVQGTVGNKLIAGNESQY 463 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 + + + + + + S H + ++ + IRP+ +V +HGE + Sbjct: 464 QYREKSIKTNIGVMNIKCKVRYLSFSAHADSPGILQLIKHIRPKNIVFVHGELESMKRFS 523 Query: 403 ELALQEGIACVPPVRNGKMLRLFPDP-IEIIDEVVHGLFL 441 + V NG+ ++ D + + EV + Sbjct: 524 KHINSTLKIPVYYPSNGQTIKFTKDSDKKDVREVYVHPNI 563 >gi|224372796|ref|YP_002607168.1| RNA-metabolising metallo-beta-lactamase [Nautilia profundicola AmH] gi|223588644|gb|ACM92380.1| RNA-metabolising metallo-beta-lactamase [Nautilia profundicola AmH] Length = 466 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 93/266 (34%), Gaps = 60/266 (22%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + + I+IDCG+ ++ + + + K + A+ ITH H DH G + Sbjct: 21 HILDTGKSKILIDCGMFQGLNEHL-------NYEPLGFDPKEIDALIITHGHLDHVGRIP 73 Query: 86 DLWSF-LHVPVYASPFAIGLLE------AKRVYE-------------------------- 112 L+ V+A P + + AK E Sbjct: 74 LLYKQGFRGKVFAHPATFDIAKIVLMDSAKLQEEEYKTRYKKAQRRGEENKIKKPLYTKD 133 Query: 113 ---RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI----VHTGD 165 + KKI + + K+ + + R I + + I +I V +GD Sbjct: 134 DIKEIFKKINRVKIEYNKKIKITKDIKATFRDAGHILGSSFVEIDFKEFDIKKKVVFSGD 193 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMKN 223 ++ IL AL +ST R I E + KK I D + N Sbjct: 194 LGNKNNGILPTPA--------KPTYADALFIESTYGDRNHKNIDESIREFKKVIIDTLLN 245 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ TF+ + R + I+ I ++ Sbjct: 246 G-GNVLIPTFA--IERAQQILCILKE 268 >gi|104783044|ref|YP_609542.1| beta-lactamase-like [Pseudomonas entomophila L48] gi|95112031|emb|CAK16758.1| putative beta-lactamase-like [Pseudomonas entomophila L48] Length = 252 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 61/182 (33%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + L Sbjct: 45 --SASQLSAVLVTHEHADHVHGVGLLSRRYNVPVYMSQGTLRGLRKPVEVAGFLG----- 97 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GD + VG + + RV H E + VI D D +L D Sbjct: 98 ---CGDVLPVGDLQVSATRVEHDAYEPLQYVISDGHRRFGMLTDLGSYDYHLLSRYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|256546121|ref|ZP_05473474.1| metallo-beta-lactamase family protein YycJ [Anaerococcus vaginalis ATCC 51170] gi|256398238|gb|EEU11862.1| metallo-beta-lactamase family protein YycJ [Anaerococcus vaginalis ATCC 51170] Length = 263 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 21/231 (9%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 I+IDCG S K + ++ I + KNL AIF+TH H DH + Sbjct: 18 VEHKGSKILIDCGFSGRKIENL--------LSQIGENPKNLDAIFLTHEHIDHVKGASVM 69 Query: 88 WSFLHVPVYASPFA-IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 +P+YA+ + ++ K F++ + +F I + ++H Sbjct: 70 SRRYDIPIYANKGTWLSFIKN----AGKLKDENIKIFKSNSFFNFNSFDIFPISIHHDAS 125 Query: 147 ETMALVIRSPVGNIVHTGDWKLDDDAI-------LGDVTDKDSLCAIGNEGILALMCDST 199 E + ++ I D + D+ I + + G Sbjct: 126 EPVGFILYLDNKKITVLTDTGIIDERILNEIKGSDVYYFEANHDLDALKRGPYTYSMKVR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + G +E+ K++ D ++ + + S + + + + Sbjct: 186 IMGKMGHLSNEQS-AKSLADALQGKNEKIFLAHLSETNNSEQLCKITVDNY 235 >gi|302877124|ref|YP_003845757.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307687819|ref|ZP_07630265.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302579981|gb|ADL53993.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 260 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 19/208 (9%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I++D G+S + +D I + +++ IFITH H DH + L ++P Sbjct: 24 ILVDAGLSGKYIEKALID--------IEENPRDIAGIFITHEHTDHIKGVGVLSRKYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 ++A+ G LE+ + K+ + + + F H + ++ Sbjct: 76 IFANELTWGKLESSLGKLKDENKVIIDKQKEIKDLLITRFD-----TPHDAVASSGFTVQ 130 Query: 155 SPVGNIVHTGDWKLDDDAILG--DVTDKDSLCAIGNEGILAL----MCDSTNAMREGTCI 208 S + D I +D + + + ++ + + Sbjct: 131 SGNKKVAIVTDIGHFSSEIKNTIKDSDIVLIESNHDVEMVKFGPYPYMLKKRILSNVGHL 190 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 S + I DIM + + +++ S++ Sbjct: 191 SNDDCGRAILDIMDHKQKHIILGHLSNN 218 >gi|167766755|ref|ZP_02438808.1| hypothetical protein CLOSS21_01261 [Clostridium sp. SS2/1] gi|167711509|gb|EDS22088.1| hypothetical protein CLOSS21_01261 [Clostridium sp. SS2/1] gi|291560716|emb|CBL39516.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [butyrate-producing bacterium SSC/2] Length = 529 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 74/488 (15%), Positives = 138/488 (28%), Gaps = 85/488 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + +G E+ + K ++D G+ + VDL Sbjct: 1 MKLMFIGADHEVTGSCHYVEAC----GKRFIVDYGMEQGLNVYENVDLPV--------NA 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------VYERVSKK 117 NL I +THAH DH G + L++ +YA+ L E +E K Sbjct: 49 GNLDFILLTHAHIDHSGLIPLLYAKGFRGKIYATRATTDLCEIMLQDSAHIQEFEAEWKN 108 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW----------- 166 + V + + + +P I G + D Sbjct: 109 RKARRSGKPEVVPIYTMDDAINVMQYFVPCPYGRQIEVADGITIKFTDIGHLLGSSSIEV 168 Query: 167 ---KLDDDAILGDVTDKDSLCAIGNEGI------LALMCDSTNAMREG--TCISEKGIKK 215 ++D + L D + + ++ +ST R + Sbjct: 169 WLREVDVEKKLVFSGDIGNFNQPLIKDPSYTREADYVIMESTYGDRYHGKHQDYVTELTD 228 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA--EQIGRKIVLLGSSLKRVVSVAIDVGI 273 I G V++ +F+ V R + ++ + +I G K VV + V Sbjct: 229 VIQRTFDRG-GNVVIPSFA--VGRTQELLYYIRQIKAEDRIKNHG-DFKVVVDSPLAVEA 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTVIFSS 332 K + + + Y E + ++ G S L ++ E + + + VI S+ Sbjct: 285 TKIFNMNIDET----YDEEAMELVKQGINPITFSNLHLSITTEESKEINFETEPMVIISA 340 Query: 333 RAI-----------PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-------------- 367 + + I + + E V Sbjct: 341 SGMCEAGRIRHHLKHNLWRSENTIIFVGYQAYGTLGRSLIEGAKEVKLFGEVIKVAADIV 400 Query: 368 -----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 SGH N L + +P+ + +HGE A E +G Sbjct: 401 QLEGLSGHADKNGLLKWVNSFEKKPEEVFVVHGEDAVCEAFTSCLKDEYKFKARAPYSGD 460 Query: 421 MLRLFPDP 428 + L Sbjct: 461 VFDLITGE 468 >gi|196234103|ref|ZP_03132937.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196221852|gb|EDY16388.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 268 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 16/153 (10%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N AL + + +++D G+S + + + + Sbjct: 8 GSGSAG-NCALVE----TPQARLLVDGGLS--------ARQIVLRLAKCGVNPVEIDGVL 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH GAL P+Y + +L+ + F G + Sbjct: 55 LTHEHGDHSGALEVWCKQFATPIYCNRLTAEVLQR---ESSPQSRKDWKLFVTGSAFSIK 111 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++E+ V H E + V+ + D Sbjct: 112 DITVETFPVPHDAVEPVGFVLHHGNEALGVLTD 144 >gi|315644221|ref|ZP_07897391.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315280596|gb|EFU43885.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 267 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 21/153 (13%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITH 75 N + + ++ID G+ +D + + + + I +TH Sbjct: 14 GNATIVR----NEDTTLLIDAGL-----SARRID------ELLKEREMMGEEIDGILVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH L + ++P+YA+ EA + I ++ + D G Sbjct: 59 EHSDHIRGLGAVARKYNLPIYANEKTW---EAMTKSLGKIAEENRIVLESHEVKDFGTLR 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +E ++H + + D Sbjct: 116 VEPFEISHDAAAPVGYCFYDGDEKLGVATDLGY 148 >gi|327461012|gb|EGF07345.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1057] gi|332358681|gb|EGJ36504.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK355] Length = 266 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K I++D G+S K ++ I ++ + Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSL--------LSEIGRKPE 51 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L AI +TH H+DH + L H+ +YA+ +A F+ G Sbjct: 52 DLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFELG 108 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G +ES V+H + V D + D A + + D + Sbjct: 109 KTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENADAYLIE 168 Query: 185 AIGNEGIL 192 + + IL Sbjct: 169 SNHDIEIL 176 >gi|229000250|ref|ZP_04159819.1| hypothetical protein bmyco0003_48030 [Bacillus mycoides Rock3-17] gi|229007773|ref|ZP_04165361.1| hypothetical protein bmyco0002_46520 [Bacillus mycoides Rock1-4] gi|228753481|gb|EEM02931.1| hypothetical protein bmyco0002_46520 [Bacillus mycoides Rock1-4] gi|228759582|gb|EEM08559.1| hypothetical protein bmyco0003_48030 [Bacillus mycoides Rock3-17] Length = 264 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + ++ ++ID G+S + + +++ I +TH H DH L L Sbjct: 21 TEKQKLLIDAGLSGKATEAL--------FQQAELDIQDISGILVTHEHSDHIKGLGVLAR 72 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 73 KYQLPVYANEKTWSAMEHLI---GNIPTDQKFVFSIGDVKTFGDIEVESFGVSHDAAEPM 129 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + D Sbjct: 130 FYAFHHNGRKLALITDTGY 148 >gi|220934023|ref|YP_002512922.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. HL-EbGR7] gi|219995333|gb|ACL71935.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. HL-EbGR7] Length = 255 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 33/158 (20%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 I++DCG PD E + +F+TH H DH L L L Sbjct: 24 DDDILLDCGTGVGDLS--------PD------ELSRIRHVFLTHPHMDHVACLPMLVDTL 69 Query: 92 -----HVP--VYASPFAIGLLEAKRVYERVSKK-----------IPCISFQAGDKVDVGA 133 P VYA+P I +L+A ++ + + G+ V +GA Sbjct: 70 FAQLKDAPLMVYATPPCIEILQAHIFNWQIWPDFQTLPAPDSPVVRFRPVEWGETVTLGA 129 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 I+ + H++P + G +TGD +D Sbjct: 130 RRIDVLPAIHTVP-ACGYRVEGNGGAFAYTGDCTSNDS 166 >gi|328350068|emb|CCA36468.1| hypothetical protein PP7435_Chr1-0308 [Pichia pastoris CBS 7435] Length = 741 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 47/427 (11%), Positives = 119/427 (27%), Gaps = 69/427 (16%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYE------------- 112 + + I+H H DH +L + + V+ + + Sbjct: 15 VDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLNDFVRVTAIDDDSNQL 74 Query: 113 ----RVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + I +++ + + H + I ++ TGD+ Sbjct: 75 YSDKDLKDSFDRIETIDFHSTIEIDGIRFTAYQAGH-VLGAAMFFIEIAGIKVLFTGDFS 133 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 ++D L + + L+ +ST EK KK I Sbjct: 134 REEDRHLS-------VAEVPPVRPDVLITESTFGTATHEPREEKE-KKLTTMIHSTLANG 185 Query: 228 VLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 V ++ R + ++ I ++ K+ ++ ++V + + + Sbjct: 186 GRVLMPVFALGRAQELLLILDEYWSQHQDLENIKVYYASDLARKCLAVYQTYINMMNENI 245 Query: 280 FLSDESFGLYPREQLIV---------------IATGSQGEPRSALAQLSRGEMRNVKLAE 324 P + + + S G ++ +++ Sbjct: 246 RKKFRDTNKNPFQFQYIKNIKNLSKFDDFQPSVVVASPGMLQNGVSRALLE---KWAPDP 302 Query: 325 KDTVIFSSRAIPGN---EVAIGHI-KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMY 380 ++T+I + ++ G E+ + V + + + H + Sbjct: 303 RNTLIMTGYSVEGTMAKEILLEPTEIPSQQNPDVLIPRRMTVEEISFAAHVDYEQNSKFI 362 Query: 381 QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLF 440 + + P+ +V +HGE G + + PD +++ + Sbjct: 363 ELVNPKTIVLVHGES----------NPMGRLKSALLSKYSKYKNTPDEVKVYNPRNCEDL 412 Query: 441 LKDGFLI 447 L + I Sbjct: 413 LVEFKGI 419 >gi|294338918|emb|CAZ87258.1| putative mRNA cleavage and polyadenylation specificity factor [Thiomonas sp. 3As] Length = 460 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 69/464 (14%), Positives = 137/464 (29%), Gaps = 90/464 (19%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ + + K ++IDCG+ +L + D F + K++ + +THAH Sbjct: 10 RNVTGSCHLLHAQGKRVLIDCGMFQGSHELDEENAE--DFGF---DPKSIDLLLLTHAHL 64 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC----------- 120 DH G + L + + L A E + Sbjct: 65 DHCGRIPLLVKRGFRGEIITTAATRELTRVVLLDAAHLQEEEAERNTRHAHRRGDAQAQP 124 Query: 121 ---------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSP----VGNI 160 + G +++ S H I + ++ I ++ Sbjct: 125 LYTTLDALNALEFFGRTAVYGQTLELAPGLSATFFDAGH-ILGSASIRIEQTASGAHRSV 183 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 + +GD A+L D +++ ++T R E I + I Sbjct: 184 IFSGDLGNGGHAVLRDPQLPPR--------ADSVVMETTYGDRLHK-PIEPSIAELFAAI 234 Query: 221 MKNAK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + K G V++ TF+ + R + I+ + G + L +L + + + + + Sbjct: 235 SETLKRGGNVVIPTFA--LERAQEILFYLRE-GLEAGKLPRTLPVFLDSPMAISATEIFR 291 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + L + P + + + +L ++ S G Sbjct: 292 HH---PECYGNAIDALFRAGSDPFSLPGLRFTREAADSIALNRLVGGAVIMAGSGMATGG 348 Query: 339 EVAIGHIKNRLVEQGVRVIAEDA---------------------ECPVHV--------SG 369 V N + V A E PVH S Sbjct: 349 RVRHHLRHNLGRHESSVVFVGYAARGTLARLLIDGATKVKLFGEEIPVHARLYTINGFSA 408 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 H +L Q ++P+ + +HG+P + A L + Sbjct: 409 HADQRELLAWQQALKPEQTILVHGDPDSMDAFAALLKNTRVQRP 452 >gi|316935656|ref|YP_004110638.1| RNA-metabolising metallo-beta-lactamase [Rhodopseudomonas palustris DX-1] gi|315603370|gb|ADU45905.1| RNA-metabolising metallo-beta-lactamase [Rhodopseudomonas palustris DX-1] Length = 540 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 12/110 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F G + + L+ + K ++DCG+ F +L + F Sbjct: 4 TIRFC--GAARTVTGSCYLFE----TKGKRFLVDCGL-FQGQKTLK-ELNYGAFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 ++ A+ +THAH DH G L L + A+ I L Sbjct: 53 PSDIDAVLLTHAHIDHCGLLPKLVREGFKGRILATRGTIDLCSYMLPDAG 102 >gi|158321798|ref|YP_001514305.1| beta-lactamase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141997|gb|ABW20309.1| beta-lactamase domain protein [Alkaliphilus oremlandii OhILAs] Length = 264 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 92/246 (37%), Gaps = 41/246 (16%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDIT 59 + F L G G N L +I+ID G+S ++ L VD+ Sbjct: 1 MTVRFCSLASGSSG----NCHLVH----DKDHFILIDAGLSGKQIENKLKEVDV------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + +NL AI ++H H DH + L +VP+YA+ + K K+ Sbjct: 47 ----DPRNLSAILVSHEHSDHINGVGILSRRYNVPIYANTGTWEGMGCKI---GKVKEEN 99 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +F + + +G F+I R++H E + I+ I D + ++G++ Sbjct: 100 IKNFVSNEDFYIGDFNIRPYRISHDANEPVGFSIKKKDIKISIATDLGYISEDVIGEI-- 157 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCIS-----EKGIKKNIYDIMKNAKGCVLVTTFS 234 EG ++ +S + S ++ + N+ + A G +V Sbjct: 158 ---------EGSNLVILESNHDEEMLKAGSYPYSLKRRVLSNMGHLSNEAAGNAIVELVH 208 Query: 235 SSVSRI 240 +V I Sbjct: 209 KNVKSI 214 >gi|157377290|ref|YP_001475890.1| aspartate kinase [Shewanella sediminis HAW-EB3] gi|157319664|gb|ABV38762.1| aspartate kinase [Shewanella sediminis HAW-EB3] Length = 478 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 61/447 (13%), Positives = 140/447 (31%), Gaps = 77/447 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ D + F+ + K + A Sbjct: 6 LGATQEVTGSCHLLE----VDGQQLLLDCGLIQGGK----ADQLRNHEPFLFE-PKVIAA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P++ L ER++KK Sbjct: 57 VVLSHAHIDHSGRLPLLVKSGFSGPIFTHKATAELCAIMLKDAAMLQRRDAERLNKKRVK 116 Query: 121 ISFQAGDKVDVGA---------FSIESVRVNHSIPETMAL-----VIRSPVGNIVHTGDW 166 + + + + ++ + IP I + G+ Sbjct: 117 QEMEPIEPLFIEEDVDRAMAQFVLLDYGDMTRVIPHVDICLSDAGHILGSAIVELFLGEG 176 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGI----LALMCDSTNAMREGTCISE--KGIKKNIYDI 220 + + + + + I +M +ST R ++ + +K+ Sbjct: 177 VEQKKLVFSGDLGRAGMPLLEDPSIVDSADLVMMESTYGNRMHRSWNDTIEELKQIFSKA 236 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------IVLLGSSLKRVVSVAIDVG 272 + + G +L+ FS V R + ++ + ++ + +++ + Sbjct: 237 ISESHGNILLPAFS--VGRAQELLYLFHLYAKEWDLQRWKICLDSPMAIEATSVYLNNYP 294 Query: 273 IIKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LSRG------- 315 ++ D + G +P + I + + + + + + G Sbjct: 295 LMDDDFKRFTRMHPGQHPLLSNVEFILSTDESMLLNDVHKGLIIIAGSGMCNGGRIRCHL 354 Query: 316 EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGH 370 E + + + + PG I + + + + D +H S H Sbjct: 355 EHNLWRSECDVIICGYQAISTPG-----RLIVDGAEQLTINGKSIDVAACIHTVGGLSAH 409 Query: 371 PYPNDLKRMYQWIRPQ-VLVAIHGEPL 396 +L Y+ + + LV +HGE Sbjct: 410 ADQAELLHWYRHFKERPPLVLVHGESE 436 >gi|149279547|ref|ZP_01885676.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] gi|149229583|gb|EDM34973.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] Length = 263 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 21/165 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M +L L G G N G + + ++ID G+S + + +T Sbjct: 1 MACNDLFIASLN-SGSNG-NCYYVG----NEEEAVLIDAGISCRETEK--------RMTR 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + AIFI+H H DH L L + ++PVY + + + ++ Sbjct: 47 LGLDMGKVKAIFISHEHTDHIKGLCTLSAKFNLPVYITRGTM------LNCKFSIREDLF 100 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI-VHTG 164 + + +GA ++ H E + ++ + V T Sbjct: 101 RPISSHQTIQIGALRVKVFPKIHDAIEPHSFMVSCGETKVGVFTD 145 >gi|238018955|ref|ZP_04599381.1| hypothetical protein VEIDISOL_00815 [Veillonella dispar ATCC 17748] gi|237864439|gb|EEP65729.1| hypothetical protein VEIDISOL_00815 [Veillonella dispar ATCC 17748] Length = 211 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 27/163 (16%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++LV + PLG + G N + G + + +ID P V + Sbjct: 1 MSEQQLVLMRMPLGPL---GTNCYVI--GDKAVGEAFIID-------PATPEV------L 42 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE--- 112 + K A+ +TH H DH G + ++ HVPVY I L E Sbjct: 43 ESLKKHDLKPKAVLLTHGHGDHIGGVQEIVDTYHVPVYIQKGDIPYLLDPELNLSAYSNP 102 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + K I + GD + GA +E + P + + Sbjct: 103 TPIKVKADIIEVKQGDHITCGAIDLEVLETPGHTPGGVCYYME 145 >gi|257414060|ref|ZP_04745120.2| VicX protein [Roseburia intestinalis L1-82] gi|257201329|gb|EEU99613.1| VicX protein [Roseburia intestinalis L1-82] Length = 249 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 13/171 (7%) Query: 30 SSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S ++ID G+S ++ L +DL + + + + +TH H DH L + Sbjct: 3 SDENHVLIDAGISGKRIENGLNSIDL----------KTEEMQGVLVTHEHIDHISGLGVI 52 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+YA+ I + ++ + ++G IE + ++H + Sbjct: 53 ARRYGLPIYATQGTIDAILNT-KSVGKIEESLFHAITPDQPFEIGDLLIEPISISHDAAD 111 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 +A I++ D D+ ++ + + D L N + L S Sbjct: 112 PVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEANHDVHMLQVGS 162 >gi|254478176|ref|ZP_05091558.1| metallo-beta-lactamase domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035905|gb|EEB76597.1| metallo-beta-lactamase domain protein [Carboxydibrachium pacificum DSM 12653] Length = 259 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 17/176 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N GY +++D G++ ++ + I + + AI ITH H+ Sbjct: 12 GNAIYIGYKDVH----LLVDAGLTGRT-----IEKALLN---IGVHPEQISAILITHEHK 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L ++P+YA+ +E + ++ F G++ ++G I+ Sbjct: 60 DHILGAGVLSRRYNIPIYANKATWEAMERDIKEIKEENRLY---FATGEEFEIGEIKIKP 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 + H E + ++ I D + A +D L + + +L Sbjct: 117 FKKPHDAAEPVGFSFKAGGKKISIATDLGYMTRGVAYNLMESDLILLESNHDVKML 172 >gi|325694848|gb|EGD36753.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK150] Length = 266 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 21/188 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G G N + + +K I++D G+S K ++ I ++ + Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSL--------LSEIGRKPE 51 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +L AI +TH H+DH + L H+ +YA+ +A F+ G Sbjct: 52 DLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFELG 108 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLC 184 G +ES V+H + V D + D A + + D + Sbjct: 109 KTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENADAYLIE 168 Query: 185 AIGNEGIL 192 + + IL Sbjct: 169 SNHDIEIL 176 >gi|225027064|ref|ZP_03716256.1| hypothetical protein EUBHAL_01320 [Eubacterium hallii DSM 3353] gi|224955528|gb|EEG36737.1| hypothetical protein EUBHAL_01320 [Eubacterium hallii DSM 3353] Length = 263 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 13/155 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + +ID G+S + +T + + + IF+TH H Sbjct: 12 GNCIYVG----NEKSHFLIDAGIS--------RKRIVEGLTQMEVAPETIQGIFVTHEHM 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L VPV+A+ I + + K S + + + IE+ Sbjct: 60 DHISGLGVFLRKYPVPVFATAKTIDEILST-SSLGKVDKNLFESITPDNPIYMDGIKIEA 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 R+ H + + + + D+ D+ + Sbjct: 119 SRILHDAADPVCYTVSDTESKVGVATDFGTYDEYL 153 >gi|261410062|ref|YP_003246303.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|329925066|ref|ZP_08280010.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|261286525|gb|ACX68496.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] gi|328940185|gb|EGG36517.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 267 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 29/230 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITH 75 N + + ++ID G+ +D + + + + I +TH Sbjct: 14 GNATIVR----NEDTTLLIDAGL-----SARRID------ELLKEREMMGEEIDGILVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH L + ++P+YA+ EA + I ++ + D G Sbjct: 59 EHSDHIRGLGAVARKYNLPIYANEKTW---EAMSKSLGKIAEENRIVLESHEVKDFGTLR 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILA 193 +E ++H + + D + D D +D L A + +L Sbjct: 116 VEPFEISHDAAAPVGYCFYDGDEKLGVATDLGYVSDKVKKALDGSDVLVLEANHDIEMLR 175 Query: 194 L----MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT--TFSSSV 237 + + + +S + +++ + + ++ Sbjct: 176 MGRYPWNTKRRILGDMGHLSNNSAGDALSELLTGDTKRTYLAHLSLDHNM 225 >gi|94497068|ref|ZP_01303641.1| hypothetical protein SKA58_18545 [Sphingomonas sp. SKA58] gi|94423440|gb|EAT08468.1| hypothetical protein SKA58_18545 [Sphingomonas sp. SKA58] Length = 471 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 72/460 (15%), Positives = 132/460 (28%), Gaps = 88/460 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L LG G + + Y I++D G+ F DL + I Sbjct: 18 DGLGVAFLGASGTVTGS----RYLVDDGETQIVVDSGL-FQGPR----DLRRLNWASIPP 68 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK----- 117 E ++ + +THAH DH GAL + V A+ L E ++ Sbjct: 69 EVADVGQVLLTHAHLDHSGALPRMARLGWDGTVLATRATAALCELLLPDSGHLQEKDAEF 128 Query: 118 ---------------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 I F A V G + R H I + Sbjct: 129 ANQHGFSRHQPALPLYTQADARLALQLFRPIEFGAWHAVTDG-IRVRYHRAGH-ILGAAS 186 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I I+ +GD DA++ D ++ +ST R + Sbjct: 187 IEIDWKGRTILFSGDIGRYGDAVMKDPEPPAR--------ADYVLVESTYGDRRHEQVDP 238 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI----------------------A 247 K + ++ ++ G V++ F+ V R++S++ Sbjct: 239 TKTLGDHVERCVERG-GTVVIPAFA--VGRVQSLLYHFSRLRAQGRLRDIPIFLDSPMAI 295 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEP 305 G + + + + P ++I+ A+G + G Sbjct: 296 NASGLMCDFMDEHRLARAECEAACSVAHYVREVEESKELTANPTPKVIISASGMATGGRV 355 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + + + + A+ G I I + V Sbjct: 356 LHHLKRFAPDGKNLILFSGFQAAGTRGAAMIGGARTI-KIHGEYIPVEAEVA-----NLT 409 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 +S H ++L R + P+ + HGEP + Sbjct: 410 MLSAHADSDELMRWLGSLHEAPRHVYVTHGEPTGAQVLAK 449 >gi|313115641|ref|ZP_07801098.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622057|gb|EFQ05555.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 535 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 74/498 (14%), Positives = 138/498 (27%), Gaps = 94/498 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + L +IDCG+ G D+ + I Sbjct: 1 MKITFLGANHEVTGSCTLIEAAGQR----FLIDCGM------EQGKDVY--ENQPIPVAP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 + + THAH DH G L L +YA+ + L Sbjct: 49 GEIDWVLATHAHIDHTGMLPLLVRNGFRGKIYATNPTVELCGIMLRDSAHIQEFEAEWKN 108 Query: 112 --------ERVSKKIPCISFQAGDKVDVG-----------AFSIESVRVNHSIPETMALV 152 E V +A K+ VG V V H + + ++ Sbjct: 109 RKGQRSGAEPVEPMYTVQDAEAAMKLFVGKAYEQRFQLAPGIEARFVDVGH-LLGSASIE 167 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 + G + D + + D + +ST R + Sbjct: 168 LWITEGETTTKLVFSGDIGNLDQPIIKDPAYIKE-----ADYAFMESTYGDRSHGPKPDY 222 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 + K + G V++ +F+ V R + ++ +I K ++ G V I Sbjct: 223 VSELTKILQRTFDRG-GNVVIPSFA--VGRTQEMLYFIREIKEKGLVKG---HGNFPVYI 276 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEKDTV 328 D + + D + + ++ G L ++ E R + V Sbjct: 277 DSPLAIEATRIFKDTDPDCFDADTRALLEKGIDPITFPGLRVTVTSDESRMINADRVPKV 336 Query: 329 IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC------------------------- 363 I S+ + H+K+ L ++ + Sbjct: 337 ILSASGMCEAGRIRHHLKHNLWRPECTILFVGYQAVGTLGRTLLEGATTVKLFGEPIEVQ 396 Query: 364 -----PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +SGH L R +P+ + +HGE + ++G Sbjct: 397 AELCQLTGMSGHADREGLLRWVNSFEQKPKRVFVMHGEDETEDHFVQTLTEQGFTA-CAP 455 Query: 417 RNGKMLRLFPDPIEIIDE 434 NG + + + E Sbjct: 456 YNGAQWAIGAEGAVCLQE 473 >gi|297545562|ref|YP_003677864.1| beta-lactamase domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843337|gb|ADH61853.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 259 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 11/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I+ID G+S ++ + I K+L AI ITH H+DH L ++P Sbjct: 24 ILIDAGLSGRT-----IERALLN---IGVNPKSLSAILITHEHKDHIKGAGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ G +E K+ + + ++G I + H E + + Sbjct: 76 IYANKATWGAMEKDIKEISEKNKLYFTTGEE---FEIGEIKIIPFKKPHDAVEPVGFSFK 132 Query: 155 SPVGNIVHTGDWKL 168 I D Sbjct: 133 CGDKKISIATDLGY 146 >gi|222528646|ref|YP_002572528.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455493|gb|ACM59755.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 265 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 68/198 (34%), Gaps = 28/198 (14%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 ++E++F PL G G N L Y I++D GVSF K Sbjct: 2 SDEMLFCPLYSGSSG----NSILISY----KDTSIIVDAGVSFKKLA-----------EA 42 Query: 61 IMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + K K + AI ++H H DH + L+VP+ + ++ + Sbjct: 43 LEKIGFNKKINAILLSHDHYDHVKCAGVYFRKLNVPIITNYKTWESIKNSL---GKVDES 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGD 176 G VG+ I++ + H + M + D D A + D Sbjct: 100 YVKLIDTGTSFSVGSIGIDTFSIPHDASDPMGFCFYFKDKKVSICTDVGHVNDSVARMID 159 Query: 177 VTDKDSLCAIGNEGILAL 194 +D L + + +L Sbjct: 160 FSDIILLESNHDVEMLMF 177 >gi|167040108|ref|YP_001663093.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|300914193|ref|ZP_07131509.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307724572|ref|YP_003904323.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] gi|166854348|gb|ABY92757.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|300889128|gb|EFK84274.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307581633|gb|ADN55032.1| beta-lactamase domain protein [Thermoanaerobacter sp. X513] Length = 210 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 63/190 (33%), Gaps = 25/190 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + R+ I+ID P + + +I+ N+ I +TH H Sbjct: 12 GANCYIVS--DEEEREAIVID-----PGEYSSEIQ------DYIVTNNLNVKYILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + +L V S +L + VY+++ I GD + Sbjct: 59 FDHIGGVEELKKLTQASVAISKEDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYF 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G + +E + + I + + TGD D D +L Sbjct: 119 GKYKVEILHTPGHTKGGVCFKIDN----VCFTGDTLFKDSIGRHDFPGGDFSTLRDSIKN 174 Query: 190 GILALMCDST 199 +L L D T Sbjct: 175 KLLVLGNDVT 184 >gi|281355329|ref|ZP_06241823.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281318209|gb|EFB02229.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 269 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 19/178 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G G N + G S I++D G F + + + + Sbjct: 2 VRLSALG-SGSKG-NALVLSCGDGS----IIVDVG--FSRKET------CCRLRTLGLNA 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + A +TH H+DH +P+ S L K + + F+ Sbjct: 48 EEIKAALLTHEHDDHSKGCRVFCDEFDIPLCTSSLTANFLRKK-----GKLPVRVLEFEP 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G + +G F +E V H + VIR I D + + ++D D+L Sbjct: 103 GGEFQIGGFGVEPFAVQHDAVNPVGFVIRREGLKIGIATDLGDINMLAMQRLSDCDAL 160 >gi|255523999|ref|ZP_05390961.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296186858|ref|ZP_06855259.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255512286|gb|EET88564.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296048572|gb|EFG88005.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 261 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 12/155 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S+ +++D G+ PG + + I + ++ IF+TH H DH + Sbjct: 14 SIFVSSNNAKVLVDAGL-------PG-KSIEKALERIGENPTDIDGIFVTHEHIDHTKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +P+Y + K I + + + I S +++H Sbjct: 66 GVLSRKYDIPIYTNAPTWD----SMSKTIGKIKDKNIKVLQSNCISIKDMDITSYKISHD 121 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D I + D Sbjct: 122 AAAPSGYSLSCEDKKACIATDLGFFSTEIRKTLED 156 >gi|187935301|ref|YP_001887696.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723454|gb|ACD24675.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 263 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 20/150 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPG--VDLVFPDITFIMKERKNLMAIFITH 75 G +M + S + I+ID G+ PG +D I + +L IF+TH Sbjct: 12 GNSMFV-----ASEKSKILIDAGL-------PGKRIDEAL---KSINQSPNDLDGIFVTH 56 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH + L +P+YA+ +E+ K+ + Sbjct: 57 EHSDHIKGVGVLSRKYDIPIYANSNTWNAMESLI---GKIKEHNIKVIDKRSVTQIKDLD 113 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +++ + H M I + + D Sbjct: 114 VKAFNIPHDSISPMGYTIANKDKKVSVATD 143 >gi|327463118|gb|EGF09439.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1] gi|327474729|gb|EGF20134.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK408] gi|327490286|gb|EGF22074.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1058] gi|332358952|gb|EGJ36773.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK49] Length = 266 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IDRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|148254501|ref|YP_001239086.1| hypothetical protein BBta_3061 [Bradyrhizobium sp. BTAi1] gi|146406674|gb|ABQ35180.1| hypothetical protein BBta_3061 [Bradyrhizobium sp. BTAi1] Length = 533 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 12/114 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L F G + + L + + I+IDCG+ F +L + D F Sbjct: 4 TLRFC--GAAHTVTGSCYLVR----TDKGQILIDCGL-FQGQKTLK-ELNYGDFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK 117 + A+ +THAH DH G L L ++A+ I L ++ Sbjct: 53 PAGIDAVLLTHAHIDHSGLLPKLVRMGFDGKIFATRGTIDLCSWMLPDAGNIQE 106 >gi|322516694|ref|ZP_08069603.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] gi|322124727|gb|EFX96165.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] Length = 276 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 26 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 77 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F + G IES V+H Sbjct: 78 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHVFSRDKLLTFGDIDIESFGVSHD 136 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A + + D Sbjct: 137 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENAD 173 >gi|317499033|ref|ZP_07957314.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893683|gb|EFV15884.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 529 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 74/488 (15%), Positives = 137/488 (28%), Gaps = 85/488 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + +G E+ + K ++D G+ + VDL Sbjct: 1 MKLMFIGADHEVTGSCHYVEAC----GKRFIVDYGMEQGLNVYENVDLPV--------NA 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------VYERVSKK 117 NL I +THAH DH G + L++ +YA+ L E +E K Sbjct: 49 GNLDFILLTHAHIDHSGLIPLLYAKGFRGKIYATRATTDLCEIMLQDSAHIQEFEAEWKN 108 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW----------- 166 + V + + + +P I G + D Sbjct: 109 RKARRSGKPEVVPIYTMDDAINVMQYFVPCPYGRQIEVADGITIKFTDIGHLLGSSSIEV 168 Query: 167 ---KLDDDAILGDVTDKDSLCAIGNEGI------LALMCDSTNAMREG--TCISEKGIKK 215 + D + L D + + ++ +ST R + Sbjct: 169 WLREADVEKKLVFSGDIGNFNQPLIKDPSYTREADYVIMESTYGDRYHGKHQDYVTELTN 228 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA--EQIGRKIVLLGSSLKRVVSVAIDVGI 273 I G V++ +F+ V R + ++ + +I G K VV + V Sbjct: 229 VIQRTFDRG-GNVVIPSFA--VGRTQELLYYIRQIKAEDRIKNHG-DFKVVVDSPLAVEA 284 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTVIFSS 332 K + + + Y E + ++ G S L ++ E + + + VI S+ Sbjct: 285 TKIFNMNIDET----YDEEAMELVKQGINPITFSNLHLSITTEESKEINFETEPMVIISA 340 Query: 333 RAI-----------PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-------------- 367 + + I + + E V Sbjct: 341 SGMCEAGRIRHHLKHNLWRSENTIIFVGYQAYGTLGRSLIEGAKEVKLFGEAIKVAADIV 400 Query: 368 -----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 SGH N L + +P+ + +HGE A E +G Sbjct: 401 QLEGLSGHADKNGLLKWVNSFEKKPEEVFVVHGEDAVCEAFTSCLKDEYKFKARAPYSGD 460 Query: 421 MLRLFPDP 428 + L Sbjct: 461 VFDLIAGE 468 >gi|327400790|ref|YP_004341629.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316298|gb|AEA46914.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 449 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 51/440 (11%), Positives = 118/440 (26%), Gaps = 63/440 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + + + I+ID G+ + + + + A+ Sbjct: 7 GAARSVTGSCFMLE-----DGQRILIDVGMFQGSVEKR-------NYRRFPFDPSEIDAL 54 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------------ERVSKK 117 +TH+H DH G L L + + +YA+ + E + +K Sbjct: 55 ILTHSHLDHIGLLPKLVKYGFNGEIYATRATREIAEHMLYDSAKVQEEEAHTLTRKNLRK 114 Query: 118 IPCISFQAGDKVDVG-AFSIESVRVNH--SIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + DV F ++ V + ++ G+++ + ++D Sbjct: 115 GLPVVKPLYTTEDVKECFRLKWRNVEYGKTVSLDNMAFTFRNAGHVLGSAFVEIDAGKKF 174 Query: 175 GDVTDKDSLCAI------GNEGILALMCDSTNAMREGTCISEK--GIKKNIYDIMKNAKG 226 D + L+ +ST R + E +K+ I + + Sbjct: 175 VFSGDLGERGRLIIRDPEFPPKANYLVVESTYGDRNHRSVEESIEELKQAIMETFERGGN 234 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL-------------------GSSLKRVVSV 267 ++ + I ++ + + G + Sbjct: 235 VLIPSFALERTQEILYVLHVFYRNGELPDCEVFLDSPLAIDITEVFLNHPELYNEETSRE 294 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 A L + ++ A G ++ N+ E + Sbjct: 295 AKHGNPFFLPHLRFTKSVEESREINEVRSHAIIIAGSGMCTGGRIKHHLKHNLWRRE-CS 353 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDLKRMYQWI 383 V+F + G I + + + ++ S H + L Sbjct: 354 VVFVGYQVKG--TLGRKIVDGAKRVRIYGEEIAVKAKIYTINGFSAHAGRDYLVEWSSKS 411 Query: 384 RPQVLVAIHGEPLHLVAHKE 403 +P+ + +HGE Sbjct: 412 QPEKVFVVHGEFEKSQKLAR 431 >gi|168181035|ref|ZP_02615699.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226951022|ref|YP_002806113.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|182668141|gb|EDT80120.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226844450|gb|ACO87116.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] Length = 261 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---DRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKSVGKIKEHN-------IEILDGKSVVINDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|297585565|ref|YP_003701345.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297144022|gb|ADI00780.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 264 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 13/171 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + K ++ID G+S + ++ I + ++ A+ I+H H DH Sbjct: 17 IYVETGEKRVLIDAGLS--------GKKIEAAMSRIGRSLSDVDALLISHEHSDHIKGAG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P+YA+ ++ FQ +++ G IES V+H Sbjct: 69 VLARKYSLPIYANEKTWLAMDGML---GKISPEQKFHFQRDERLAFGDLDIESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + M + D + D A + +K + + +L + Sbjct: 126 ADPMFFSFMHGKRKLTILTDTGYVSDRMAGMARSANKLIFESNHDTEMLRM 176 >gi|147669584|ref|YP_001214402.1| beta-lactamase domain-containing protein [Dehalococcoides sp. BAV1] gi|146270532|gb|ABQ17524.1| beta-lactamase domain protein [Dehalococcoides sp. BAV1] Length = 468 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 69/453 (15%), Positives = 141/453 (31%), Gaps = 78/453 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG N+ Y + R +++DCG+ + + L + D+ Sbjct: 3 IKIQFLGAAQ----NVTGSRYLLQTDRTRLLVDCGL-YQERRLQNRNWQPFDVP-----P 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------------AK 108 ++L A+ ++HAH DH G L L + PVY + + K Sbjct: 53 ESLNAVLVSHAHIDHCGLLPKLVKDGYNGPVYLTAATAEIARISLADAGKIQEEDAAFKK 112 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS---IPETMALVIRSPVGNIVHTGD 165 +ER +K D A V ++ G++ + Sbjct: 113 TRHEREGRKTQYPEIPLYTAEDARAVFPLFKTVAYNREITISPDITATFHNAGHVFGSAS 172 Query: 166 W-----KLDDDAILGDVTDKDSLCAIGNEGILA------LMCDSTNAMREGTCISEKGIK 214 + + ++ D + + ++ +ST R I+ +K Sbjct: 173 IELKITENNHQKVIAFSGDLGNWDRPILKNPDLINQADYIVIESTYGDRTHEDINGALLK 232 Query: 215 -KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSSLKRVVSV 267 +I + G V++ +F+ + R + ++ +I R V + S + ++ Sbjct: 233 LADIINQTVKLGGNVVIPSFA--LERTQDLLFFLNRLISESKIPRLKVFVDSPMAISITK 290 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA----------------- 310 D+ G P E + T + + LA Sbjct: 291 IFKEHPELYDRETTGWVKNGSSPFEFEGLHFTNKAADSEAILAEKDSCIIIAGSGMCTGG 350 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK-NRLVEQGVRVIAEDAECPV---- 365 ++ R N+ + T++F G +G + + + E + + Sbjct: 351 RIKRHLASNIS-RPESTILFVGFQATG---TLGRLITDGVKEVRILGQYYPVHARIEELR 406 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPL 396 S H L R + + P+ + HGEP Sbjct: 407 AFSAHADQPTLLRWLKGFKNRPEQVFVTHGEPK 439 >gi|301058164|ref|ZP_07199216.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300447796|gb|EFK11509.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 534 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 70/502 (13%), Positives = 133/502 (26%), Gaps = 102/502 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G + + L K I++DCG+ + + Sbjct: 2 VRITCLGAAGSVTGSCYLVE---SPGNKKILVDCGLFQGGRQMESRNWEPWGFD-----P 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 K + +F+TH+H DH G + L + SP L E + Sbjct: 54 KEIEMLFLTHSHVDHCGRIPKLVKDGFQGKIITSPPTTELCEIMLLDAAHIQEMDAEWQT 113 Query: 112 -------ERVSKKIPCISFQAGDKVDVGAFSIESV-----------RVNHSIPETMALVI 153 + + + V R I + L + Sbjct: 114 RKNSRQAKGGVDPLYTTEDAEMSLKYFKPVERDQVLAPAPGMKARLRNAGHILGSSILEL 173 Query: 154 RSPVGN----IVHTGDW-KLDDD--AILGDVTDKDSLCAIGNEGILALMCDSTNAMREG- 205 N +V +GD K D ++ D L +ST R Sbjct: 174 WIEEENETIKVVFSGDLGKKDQLIIRDPHEIFD-----------ADYLFVESTYGNRHHR 222 Query: 206 -TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII-------------------- 244 S+K + + I + +++ F+ V R + I+ Sbjct: 223 TFEDSKKELVEAI-KYSVSQNQKIIIPAFA--VERTQEILYILGEFHRDGLVPDIPIYLD 279 Query: 245 --------DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 +I + + ++ D+ +K + P +I+ Sbjct: 280 SPLAIKATEIFRKNKKYYDAEARAIVDAGFDPFDMPNLKFTPSTRESMAINEKPGSAIII 339 Query: 297 IATG--SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 +G + G + L ++ + + R I E + I V Sbjct: 340 AGSGMCTAGRIKHHLKHNLWRTGASIVIVGFQAKGTTGRKIVEGEKQV-KIFRENVAVRA 398 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIAC 412 +V S H DL P+V V +HGE ++ Sbjct: 399 KVYPIGG-----FSAHADQGDLLEWVSHFESNPKVFV-VHGELTASETLAREISEKLNLV 452 Query: 413 VPPVRNGKMLRLFPDPIEIIDE 434 + + L L + + + Sbjct: 453 THIPKWKERLILKSKEVSMGEP 474 >gi|299067198|emb|CBJ38394.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum CMR15] Length = 261 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 22/182 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG E N L ++ I++DCG G+ + + Sbjct: 3 LRFASLGSGSE--GNALLVESSDGTTSTRILLDCG--------FGIRETVRRLERLGCAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCI 121 +L AI +TH H DH G+ + + VPV+ S L R + + Sbjct: 53 ASLDAILVTHEHGDHIGSAYAFAAKHSVPVWTSHGTYRATASL--------RGADRAAVR 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D +G I V H E + + + D + + + G +T Sbjct: 105 FCRADDAFSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLH 164 Query: 182 SL 183 + Sbjct: 165 AF 166 >gi|241662689|ref|YP_002981049.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12D] gi|240864716|gb|ACS62377.1| beta-lactamase domain protein [Ralstonia pickettii 12D] Length = 261 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 14/162 (8%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F LG E N L S ++ I++DCG G+ + + Sbjct: 1 MTLRFASLGSGSE--GNGLLVESASGATCTRILLDCG--------FGIRETVRRLERLGC 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++L AI +TH H DH G+ + + + +PV+ S R + + Sbjct: 51 TPESLNAILVTHEHSDHVGSAYAVAAKFDIPVWTSHGTY----RATENLRGADRAAVRFC 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +A D VG I V H E + V + D Sbjct: 107 RADDMFCVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTD 148 >gi|88706594|ref|ZP_01104297.1| metallo-beta-lactamase superfamily protein [Congregibacter litoralis KT71] gi|88699090|gb|EAQ96206.1| metallo-beta-lactamase superfamily protein [Congregibacter litoralis KT71] Length = 267 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 28/171 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDITFIMKERKNL 68 G G G N L ++ I++DCG S L G+DL +L Sbjct: 5 GSGSRG-NATLL----QAAETCILVDCGFSLRDIQRRAALRGIDL------------GDL 47 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 AI +TH H DH + L +PVY + + RV+ +F A + Sbjct: 48 DAILVTHEHSDHASGVATLARHYGIPVYLTHGTLA-------SGRVANCPDVRAFNADTQ 100 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + +GAF++++V V H E + D + D Sbjct: 101 LHIGAFTVQAVTVPHDAREPVQYCFEYGGQRAGVLTDLGSVTSHVRSAFND 151 >gi|258405797|ref|YP_003198539.1| beta-lactamase domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798024|gb|ACV68961.1| beta-lactamase domain protein [Desulfohalobium retbaense DSM 5692] Length = 544 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ F LG + + L + + +DCG+ + +D D++ + Sbjct: 6 EMKVRF--LGAARTVTGSCYLLE----TEQYRFAVDCGLHQGNQE---IDARNWDLS--L 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 L + +THAH DH G L L PVYA+ GL+E Sbjct: 55 YTPAELDFMLVTHAHIDHTGLLPRLVKLGFSGPVYATEPTCGLMEIMLQD 104 >gi|319764912|ref|YP_004128849.1| cyclic-amp phosphodiesterase [Alicycliphilus denitrificans BC] gi|317119473|gb|ADV01962.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans BC] Length = 262 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 82/251 (32%), Gaps = 47/251 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G + + + I++D G + L + Sbjct: 1 MKVRI--LGCSGTLAKGCRTTSFLL---GERILVDAGTGVGELTL--------------E 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHV----P--VYASPFAIGLLEAKRVYERVSKK 117 E + + +F+TH+H DH AL L + P V+A P + L A + Sbjct: 42 EMQRVDHVFLTHSHLDHIAALPLLLDAVGAHRARPLQVHALPATLDALRAHVFNGVIWPD 101 Query: 118 IPCISFQAGDKVDVGAFSI-----------ESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I V + + E + HS+P + R G V++GD Sbjct: 102 FTRIPTPQAPFVRLLPLGVGDVFVVAGTPLEVLPARHSVP-AVGYAARGQRGWWVYSGD- 159 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDS--TNAM----REGTCISEKGIKKNIYDI 220 + + G+ AL ++ +NA R+ +S + + + + Sbjct: 160 TEGQEPAFWRRVNALRQS---PGGVAALCIETAFSNAEAELARKSQHLSPATLARELTAL 216 Query: 221 MKNAKGCVLVT 231 A + +T Sbjct: 217 PPGADLPIYIT 227 >gi|238923925|ref|YP_002937441.1| ribonuclease Z [Eubacterium rectale ATCC 33656] gi|238875600|gb|ACR75307.1| ribonuclease Z [Eubacterium rectale ATCC 33656] Length = 250 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 13/156 (8%) Query: 30 SSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ID G+S ++ L D+ D+ I +TH H DH L + Sbjct: 3 TDDCHVLIDAGISGKKIENGLNEFDMTATDMH----------GILVTHEHIDHIAGLGVM 52 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 H+P+YA+ IG ++ +AG +G E + ++H + Sbjct: 53 ARRYHMPIYATKATIGAIKCT-KSVGNIDDELFHPIEAGVDFTIGDIEFEPLHISHDAAD 111 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +A ++ + D DDA++ + + D L Sbjct: 112 PVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGL 147 >gi|29840644|ref|NP_829750.1| metal dependent hydrolase, putative [Chlamydophila caviae GPIC] gi|29834994|gb|AAP05628.1| metal dependent hydrolase, putative [Chlamydophila caviae GPIC] Length = 262 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 29/237 (12%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKER 65 F PL G G N G + I+ID G+S L +++ Sbjct: 4 FFPL-ASGSKG-NCTYLG----TDSCKILIDLGISKQCVTHGLLSMNV----------HP 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ IFI+H H DH + + P+ + + + + + + F Sbjct: 48 EDIQGIFISHEHSDHISGIKSFVKTYNTPIICNLETA-----RSICQFLDVRPNFKIFST 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G I++ V H + + V + D ++ ++ D D L Sbjct: 103 GTTFSFYDLKIQTFNVPHDAIDPVGFVFHYRDEKLGFCTDLGWVTSWVVHELYDCDYLLI 162 Query: 186 IGNEGILALMCDS------TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 N + S + + IS + + I+ + + SS Sbjct: 163 EANHDPELVQQSSRPDIYKKRVLSKLGHISNHECGELLQKILTPKIKKIYLAHLSSE 219 >gi|153813589|ref|ZP_01966257.1| hypothetical protein RUMOBE_04012 [Ruminococcus obeum ATCC 29174] gi|149830334|gb|EDM85426.1| hypothetical protein RUMOBE_04012 [Ruminococcus obeum ATCC 29174] Length = 265 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 13/155 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+S K + + + ++L I ITH H Sbjct: 12 GNCIYVG----SDNTHVLVDIGISGKKMET--------GLNSLELTGRDLDGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L + +P+YA+ + + + + Q + + + Sbjct: 60 DHIKGLGVISRKYGIPIYATAGTVDAM-VRTNALGKIPEGIFHEIQEDEPFMINDLKVNP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 + H + + + ++ D +D I Sbjct: 119 FTIPHDAAQPVGYRLEHEGHSVGIATDLGKYNDYI 153 >gi|229087947|ref|ZP_04220057.1| hypothetical protein bcere0022_45010 [Bacillus cereus Rock3-44] gi|228695360|gb|EEL48235.1| hypothetical protein bcere0022_45010 [Bacillus cereus Rock3-44] Length = 264 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 11/139 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + ++ +++D G+S + + +++ I +TH H DH L L Sbjct: 21 TDKQKLLVDAGLSGKATEAL--------FRQAELDIQDISGILVTHEHSDHIKGLGVLAR 72 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVYA+ +E F GD G +ES V+H E M Sbjct: 73 KYQLPVYANEKTWNAMEHLI---GNIPTDQKFIFSIGDVKTFGDIEVESFGVSHDAAEPM 129 Query: 150 ALVIRSPVGNIVHTGDWKL 168 + D Sbjct: 130 FYAFHHNGRKLALITDTGY 148 >gi|329943224|ref|ZP_08291998.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|332287804|ref|YP_004422705.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|313848376|emb|CBY17380.1| conserved hypothetical hydrolase [Chlamydophila psittaci RD1] gi|325506743|gb|ADZ18381.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|328814771|gb|EGF84761.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|328915063|gb|AEB55896.1| vicX protein [Chlamydophila psittaci 6BC] Length = 262 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 19/172 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 F PL G G N A G + I+ID G+S LV ++ + ++ Sbjct: 4 FFPL-ASGSKG-NCAYLG----TESSKILIDLGIS--------KQLVTRELLSMNVHPED 49 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AIF++H H DH + + PV + L F G Sbjct: 50 IQAIFVSHEHSDHISGIKSFIKTYNTPVICNLETARNLCQLLDVH-----PTFKIFSTGT 104 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I++ V H + + + + D I+ ++ D Sbjct: 105 TFSFHDLKIQTFNVPHDAVDPVGFIFHYRDEKLGFCTDLGWGTSWIIHELYD 156 >gi|148381506|ref|YP_001256047.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932765|ref|YP_001385881.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937263|ref|YP_001389288.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|148290990|emb|CAL85126.1| putative metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152928809|gb|ABS34309.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933177|gb|ABS38676.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] Length = 261 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---DRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKSVGKIKEHN-------IEILDGKSVVLNDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|116627884|ref|YP_820503.1| beta-lactamase superfamily hydrolase [Streptococcus thermophilus LMD-9] gi|116101161|gb|ABJ66307.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus LMD-9] gi|312278465|gb|ADQ63122.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus ND03] Length = 270 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 20 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F G + G IES V+H Sbjct: 72 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A L + D Sbjct: 131 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENAD 167 >gi|302871922|ref|YP_003840558.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] gi|302574781|gb|ADL42572.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] Length = 540 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 65/495 (13%), Positives = 127/495 (25%), Gaps = 93/495 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ + +IDCG+ G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLFEF----EGVKFLIDCGM-----FQGGLTEELLNYEAFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL---------------LEAK- 108 + + ++HAH DH G + L+ +Y + + L +E K Sbjct: 52 SEIEFVILSHAHIDHSGRIPKLYKDGFRGVIYTTDATVDLCNIMLPDSAHIQESEIEWKN 111 Query: 109 ----------------RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 K S H + + + Sbjct: 112 RKRKREGKEQLKPLYTLEDAENVLKHFRGVKYDQKVQINKNLSFVFKDAGH-MLGSAIIE 170 Query: 153 IRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD + IL D T +G L +ST R Sbjct: 171 LYIIEDGKEYKLVFSGDLGNKNVPILRDPT--------IIDGCDYLFIESTYGNR-FHVD 221 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ---IGRKIVLLGSSLKRVV 265 E KK I I V S +V R + I+ + + + ++ V Sbjct: 222 VENKSKKLIDIICTTISNGGKVIIPSFAVGRTQEILYEIAKEIVTHSEKAKVIRDVEIFV 281 Query: 266 SVAIDVGIIKKDQLFL-----------------------------SDESFGLYPREQLIV 296 + + + + + + I+ Sbjct: 282 DSPLATSATAIYKKHIEYFDTEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKSCII 341 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 I++ E L + + + K + Sbjct: 342 ISSSGMCEAGRIKHHL---KHNLWNEKNTVLFVGYQAPNTLGRKLLDGQKKVKIFGEEVE 398 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 + E SGH L + + +P+ + +HGE + E A V Sbjct: 399 VKAKIEYIEAYSGHADKGGLFSWIEHMSEKPKKIFVVHGEKEVQLEFAEELKNRFGADVI 458 Query: 415 PVRNGKMLRLFPDPI 429 G+M + P+ + Sbjct: 459 VPARGEMYEIGPEYV 473 >gi|149927494|ref|ZP_01915748.1| Beta-lactamase-like protein [Limnobacter sp. MED105] gi|149823767|gb|EDM82993.1| Beta-lactamase-like protein [Limnobacter sp. MED105] Length = 251 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 34/174 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG + G S I+ID G ++ F + + Sbjct: 2 LGCSGSIG--IPGQGTTSFLIDSDILIDAGTG------------LCELDF--ARLEQIEH 45 Query: 71 IFITHAHEDHYGALHDLWSFLHV------PVYASPFAIGLLEAKRVYERVSKKI------ 118 +FITH+H DH L L + V VYA+ I L+ E + Sbjct: 46 VFITHSHLDHICGLPFLIDTVGVGRKSPLRVYATLPTIRALQQHIFNEEIWPDFSKIPTA 105 Query: 119 -----PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + ++ G I +V V+H++P + + + +P G +GD Sbjct: 106 ENPVLEYVEIKPEQELLFGERKITTVEVDHTVP-AVGVFLTTPTGGWCFSGDTH 158 >gi|153939415|ref|YP_001392920.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|170755168|ref|YP_001783205.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|152935311|gb|ABS40809.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|169120380|gb|ACA44216.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|295320896|gb|ADG01274.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 261 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---DRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKSVGKIKEHN-------IEILDGKSVVLNDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|332362449|gb|EGJ40249.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1056] Length = 266 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 66/189 (34%), Gaps = 23/189 (12%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +NL AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 ENLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSL 183 G G +ES V+H + V D + D A + + D + Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENADAYLI 167 Query: 184 CAIGNEGIL 192 + + IL Sbjct: 168 ESNHDIEIL 176 >gi|188587486|ref|YP_001919031.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352173|gb|ACB86443.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 261 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 20/162 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ L G G N Y ++ID G+ ++ ++ K Sbjct: 1 MEVAVLASGSNG----NSIYIEYY----DTKLLIDAGL-----SGKAIERKMANVN---K 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + K L I +TH H DH + L ++PVYA+ LL + + Sbjct: 45 DPKELTGIIVTHEHRDHVKGVGVLARRFNIPVYATRDTWPLLPSII---GTVPEKSEKEL 101 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + IE V+H + + L + +P + D Sbjct: 102 -PKQGLYIQDLYIEPFPVSHDAVDPVGLCLYTPEKKLGIATD 142 >gi|167036568|ref|YP_001664146.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307267557|ref|ZP_07549034.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|320114996|ref|YP_004185155.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326391557|ref|ZP_08213088.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|166855402|gb|ABY93810.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306917424|gb|EFN47721.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|319928087|gb|ADV78772.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325992387|gb|EGD50848.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 259 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 11/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I++D G+S + +++ K+L AI ITH H+DH L ++P Sbjct: 24 ILVDAGLSGRTIEKALLNIGI--------NPKSLSAILITHEHKDHIIGAGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ ++E K+ + + ++G I + +H E + + Sbjct: 76 IYANKATWEVMEKDIKEISEKNKLYFTTGEE---FEIGDVKIMPFKKSHDAVEPVGFSFK 132 Query: 155 SPVGNIVHTGDWKL 168 I D Sbjct: 133 CGDKKISIATDLGY 146 >gi|317496358|ref|ZP_07954712.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316913494|gb|EFV34986.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 271 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 18/210 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++D G++ + ++ I ++ K++ AIF+TH H DH + L Sbjct: 17 IEDDNFRCLVDVGLT--------GKKITENLGQIGRDIKDVDAIFVTHEHIDHIKGIGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++PVYA+ K F+ D + S V+H Sbjct: 69 ARKYNIPVYANKLTWD----NMSKIGEIKSDLKFHFEKEDSKIFNGLVVNSFGVSHDAAN 124 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL--CAIGNEGILAL----MCDSTNA 201 V + D D ++ V D +L + E +L Sbjct: 125 PQFYVFEKDGKRVSILTDTGYISDKMVDYVKDSHTLVYESNHEENVLLSGPYPWPTKQRI 184 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + I+ + VL+ Sbjct: 185 LSDKGHLSNTDSANYLTRIVGSNTKNVLLA 214 >gi|302380868|ref|ZP_07269331.1| metallo-beta-lactamase domain protein [Finegoldia magna ACS-171-V-Col3] gi|303234850|ref|ZP_07321475.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] gi|302311363|gb|EFK93381.1| metallo-beta-lactamase domain protein [Finegoldia magna ACS-171-V-Col3] gi|302493968|gb|EFL53749.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] Length = 277 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I+ID G S + + +I + L AIF+TH H DH + L Sbjct: 19 IETEHSKILIDAGFSGKTIENL--------LKYINVDPSELDAIFVTHEHADHIKGIGVL 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+ A+ ++ K F+ ++ I ++ +H Sbjct: 71 SRRYNLPIIANTETWYAMDNKI---GKINDKNIYIFENNRHINFKDLDILPIKTSHDSAN 127 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + V+ + D + +D++ ++ D + N I L S Sbjct: 128 SCGYVVSKDNKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDIDMLKYGS 178 >gi|255527699|ref|ZP_05394556.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296185034|ref|ZP_06853444.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255508612|gb|EET84995.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296049868|gb|EFG89292.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 504 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 68/470 (14%), Positives = 138/470 (29%), Gaps = 98/470 (20%) Query: 25 GYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + K I++DCG+ + G + F K++ + ++H+H DH G Sbjct: 16 SHFLKVKDKNILLDCGMYQGRDEKERGNET----FNF---NPKDVDYVILSHSHIDHSGR 68 Query: 84 LHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----------------------- 119 + L+ V + L + Sbjct: 69 IPLLYKQGFKGDVICTEGTKDLCSVMLSDSGHILESEVEWKNRKRARQGLPPLEPLYTEK 128 Query: 120 --------CISFQAGDKVD-VGAFSIESVRVNHSIPETMALVI---RSPVGNIVHTGDWK 167 + ++ F I H + + ++ +V+TGD Sbjct: 129 IANVAMYLFNGYPYDQWIELFDGFKIRFRDAGHLLGSAIIEMLIEDNKKQIKLVYTGDLG 188 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK--GIKKNIYDIMKNAK 225 + IL D T + L+ ++T R T IS + + K I K Sbjct: 189 NKNIPILKDPT--------IIDYADYLIMETTYGNRLHTSISSELTDLAKIIKSTFKRG- 239 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDES 285 G V++ +F+ V R + ++ +L G S+ + + + Sbjct: 240 GNVIIPSFA--VGRTQEVLYTLNNYVENNILKGVSVY-------VDSPLASESTAIFSRY 290 Query: 286 FGLYPREQLIVIATGSQGEPRSALA------------------------------QLSRG 315 Y E +++ GS L ++ Sbjct: 291 HKYYDEEAQEILSKGSDPLSFPGLTFTKSPEESAKLNKVQSGAIIISASGMCEAGRIKHH 350 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH-VSGHPYPN 374 N+ E + +A +I ++ G V+ +H +SGH + Sbjct: 351 LKHNLWRKESSIIFVGYQAEGTLGRSIVDGAKKVKLFGEEVVVNAKIYNLHGLSGHADRD 410 Query: 375 DLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 L + + +P+ ++ +HG+ + EL L +G + G Sbjct: 411 GLVEWLEALKAKPEKVILVHGDTEAQESFNELLLSKGY-STYIAKPGDTF 459 >gi|327470649|gb|EGF16105.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK330] Length = 266 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|169824155|ref|YP_001691766.1| metallo-beta-lactamase superfamily hydrolase [Finegoldia magna ATCC 29328] gi|167830960|dbj|BAG07876.1| metallo-beta-lactamase superfamily hydrolase [Finegoldia magna ATCC 29328] Length = 277 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I+ID G S + + +I + L AIF+TH H DH + L Sbjct: 19 IETEHSKILIDAGFSGKTIENL--------LKYINVDPSELDAIFVTHEHADHIKGIGVL 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+ A+ ++ K F+ ++ I ++ +H Sbjct: 71 SRRYNLPIIANTETWYAMDNKI---GKINDKNIYIFENNRHINFKDLDILPIKTSHDSAN 127 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + V+ + D + +D++ ++ D + N I L S Sbjct: 128 SCGYVVSKDNKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDIDMLKYGS 178 >gi|162452442|ref|YP_001614809.1| hypothetical protein sce4166 [Sorangium cellulosum 'So ce 56'] gi|161163024|emb|CAN94329.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 468 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 86/278 (30%), Gaps = 50/278 (17%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIMKERKN 67 +G + +M L + +++DCG+ + L P Sbjct: 6 IGAAQTVTGSMHLLR----TRDATVLLDCGLYQGRRAESFERNRRLPLP--------IHE 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY--------------- 111 + A+ ++HAH DH GAL L P+YA+P L Sbjct: 54 IDAVVLSHAHIDHSGALPILVKNGYEGPIYATPATRDLAAVMLRDAAAIQVSDARYLNRR 113 Query: 112 -ERVSKKIPCISFQAGDKVDVGAF-SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL- 168 E+ P + D V A + + +H I + + V L Sbjct: 114 AEKQGSDEPRVEPLYEDDDAVEAISRLVAAPYHHPIEIAPGVRLTFLDAGHVLGSAVSLL 173 Query: 169 -----DDDAILGDVTDKDSLCAIG------NEGILALMCDSTNAMREGTCISE--KGIKK 215 D + D E L+C+ST R E + + + Sbjct: 174 DVVEGDAHRRVAYTGDLGRYERPILRDPEVAERADVLVCESTYGDRLHEGTDELDEDLAR 233 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 + + G + + TF+ + R + +I +++ R Sbjct: 234 VVRRTFERG-GKLYIPTFA--LERAQEVIFALKKLRRH 268 >gi|83644363|ref|YP_432798.1| RNA processing exonuclease [Hahella chejuensis KCTC 2396] gi|83632406|gb|ABC28373.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Hahella chejuensis KCTC 2396] Length = 453 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 93/277 (33%), Gaps = 58/277 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FPDITFIMKE 64 L F LG G + + L GS +++DCG+ GV + + + Sbjct: 3 LKF--LGAAGTVTGSKYLLSDGSGK----LLLDCGL------YQGVKTLRERNWKPFPAK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE----------------- 106 + ++ ++HAH DH G + L V+ +P L + Sbjct: 51 VSEIKSVVLSHAHLDHSGYIPALMKHGFKGKVFCTPATFALAKVLLPDSGFLQEEDARYA 110 Query: 107 AKRVYERVSK--------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 KR + + S K + + E R H I ++ Sbjct: 111 NKRKFSKHSPALPLYTEKDAWEALKHFETVDFHEKFSPIHGVTAEIHRAGH-ILGAGSVQ 169 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 + G+IV +GD +D I+ + L+ +ST R + Sbjct: 170 LSGAKGSIVFSGDLGRQEDRIMYPPETIAA--------ADYLVVESTYGDRLHDKV---D 218 Query: 213 IKKNIYD-IMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 ++ + + I AK +V + +V R + ++ + + Sbjct: 219 VRAQLSEAINATAKRGGVVLIPAFAVGRAQHLLYLIQ 255 >gi|325690804|gb|EGD32805.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK115] gi|325696127|gb|EGD38018.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK160] Length = 266 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDVSQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAVCPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|207722883|ref|YP_002253317.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum MolK2] gi|206588067|emb|CAQ18647.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum MolK2] Length = 261 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 22/182 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L ++ I++DCG G+ + + Sbjct: 3 VRFASLGSGSE--GNALLVESSDGATSTRILLDCG--------FGIRETVRRLERLGCAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCI 121 ++L AI +TH H DH G+ + + ++PV+ S L R + + Sbjct: 53 ESLNAILVTHEHGDHVGSAYAFAAKYNIPVWTSHGTYRATASL--------RGADRAAIR 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D +G + V H E + + + D + + + G +T Sbjct: 105 FCRADDVFSIGDLRVLPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLH 164 Query: 182 SL 183 + Sbjct: 165 AF 166 >gi|322807891|emb|CBZ05466.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Clostridium botulinum H04402 065] Length = 261 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---DRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKNVGKIKEHN-------IEILDGKSVVLNDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|188589469|ref|YP_001922679.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499750|gb|ACD52886.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 263 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 20/150 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPG--VDLVFPDITFIMKERKNLMAIFITH 75 G +M + S + I+ID G+ PG +D I + +L IF+TH Sbjct: 12 GNSMFV-----ASEKSKILIDAGL-------PGKRIDEAL---KSINQSPNDLDGIFVTH 56 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH + L +P+YA+ +E+ K+ + Sbjct: 57 EHSDHIKGVGVLSRKYDIPIYANSNTWNAMESLI---GKIKEHNIKVIDKRSVTQIKDLD 113 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +++ + H M I + + D Sbjct: 114 VKAFNIPHDSISPMGYTIANKNKKVSVATD 143 >gi|55823080|ref|YP_141521.1| hypothetical protein str1158 [Streptococcus thermophilus CNRZ1066] gi|55739065|gb|AAV62706.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 276 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 26 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 77 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F G + G IES V+H Sbjct: 78 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHD 136 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A L + D Sbjct: 137 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENAD 173 >gi|323351213|ref|ZP_08086869.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] gi|322122437|gb|EFX94148.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] Length = 266 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAVCPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|237755933|ref|ZP_04584523.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691908|gb|EEP60926.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 464 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 70/479 (14%), Positives = 142/479 (29%), Gaps = 88/479 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 ++ GGV + + L G + ++IDCG+ GVD + Sbjct: 1 MIVKSFGGVEGVTGSCHLVNVGHLN----LLIDCGM------FQGVDED-KNYEPFGFNP 49 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSK 116 + + +THAH DH G + L + ++ L +V+ Sbjct: 50 AKIDYLILTHAHIDHIGRVPLLVKQGFKGKIISTRATYALARIMLLDAVKVMSEEYKVNY 109 Query: 117 KIPCISFQAGDKVDV---------------------------GAFSIESVRVNHSIPETM 149 K + + V +I H I ++ Sbjct: 110 KKALRRGKPEEVKPVLYDEDDVFQAMEHFKIFLECDESYKLSKDVTIIFRNAGH-ILGSV 168 Query: 150 ALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + ++ +GD +D ++ ++ + + +ST R+ Sbjct: 169 YVELLVNDEGRSKKVIFSGDLGTNDKLVIREI--------EYPKNADFIFIESTYGDRKH 220 Query: 206 TCISEKGIKKNIYDIMKNAK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + E I + I+++ K G V++ TF+ ++ I ++ L Sbjct: 221 KPLPE-TINEFKTAIIESFKDGGNVVIPTFALERAQEILFILRTMYDNGELPPCKIFLDS 279 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQL-----IVIATGSQGEPRSAL--------- 309 +++A ++ L+DE L + + V T S E R Sbjct: 280 PLAIAATKLFLQ-FPNQLNDEVLKLLKQNKNPFVFPWVYFTESVEESRKINEIESGAIIL 338 Query: 310 --AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECP 364 + + G L SS G + I + + + Sbjct: 339 AGSGMCNGGRIKHHLKHNLWRENSSVIFVGYQAEGTLGRQIVDGAKYVKIYGEEIAVKAK 398 Query: 365 VHV----SGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 ++ S H +L + + + + IHGEP KE + V+ Sbjct: 399 IYTINGFSAHADQENLLTFIKQAKGVETVYLIHGEPKIQKIFKEKIKETLNLPTHIVKR 457 >gi|115474405|ref|NP_001060799.1| Os08g0107600 [Oryza sativa Japonica Group] gi|42408235|dbj|BAD09392.1| DNA ligase-like [Oryza sativa Japonica Group] gi|113622768|dbj|BAF22713.1| Os08g0107600 [Oryza sativa Japonica Group] gi|215767381|dbj|BAG99609.1| unnamed protein product [Oryza sativa Japonica Group] Length = 663 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 66/468 (14%), Positives = 145/468 (30%), Gaps = 53/468 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV- 129 F+THAH DH + + +V VYAS I + + + A V Sbjct: 27 FLTHAHRDHIAGI----TATNVAAVYASRLTILIACHIFPQLDRADAFVEVELGAPVLVP 82 Query: 130 -DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 G F++ + NH P + + + G ++HTGD +L D L A Sbjct: 83 DPDGDFTVTAFDANH-CPGAVMFLFEGASFGRVLHTGDCRL--------TPDFRFLAA-- 131 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 + D T A S+ + + + + +V S + + +++++ Sbjct: 132 ----DYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHPNAPVVYLVSDMLGQEEILMEVS 187 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + G KI + + + ++ E + VI E + Sbjct: 188 KVFGSKI-YVDRDKNSECYHTLSL---------VAPEILTDDSSSRFQVIGFPRLSERAT 237 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 + L+R + + +I +S R + E V Sbjct: 238 EMLALARAKH-----QPEPLIIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVWHVCF 292 Query: 368 SGHPYPNDLKRMYQWIRPQVLV-----AIHGEPLHLVAHKELALQEGIACVP-PVRNGKM 421 S H +L++ ++I+P+ ++ + E ++ H + + +R Sbjct: 293 SMHSSREELEQALRFIQPKWVISTTPPCMAIELSYVKKHCFASRLRNDDPLWKLLRLSDG 352 Query: 422 LRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSFVGHLSVNVLLDNHYNIFG 481 + V ++ + D + ++ + + I Sbjct: 353 NSAVSGSPLAVPTVEMIKKCEEEEVTCSVKDSFSSDGIRMRDQ---EPTL---EDFEINV 406 Query: 482 VPEIVDIGIPAYD-GDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRE 528 P + GI + + ++ K ++V + +L + Sbjct: 407 EPPVTLFGIARFGLTEEPELWKDEHESVE--IDELKVQMENSATECEQ 452 >gi|312862955|ref|ZP_07723195.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] gi|311101815|gb|EFQ60018.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] Length = 270 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 20 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K + ++ F + G IES V+H Sbjct: 72 GVLARKYGMDIYANEKTWQIMDSKNMLGKIE-NSQKHVFSRDKLLTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A + + D Sbjct: 131 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENAD 167 >gi|322372855|ref|ZP_08047391.1| VicX protein [Streptococcus sp. C150] gi|321277897|gb|EFX54966.1| VicX protein [Streptococcus sp. C150] Length = 270 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I+ID G+S K + I ++ +L AI +TH H+DH + Sbjct: 20 SFYLETPEKKILIDAGLSGKKITNLLAE--------IDRDPSDLDAILVTHEHKDHIHGV 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F + G IES V+H Sbjct: 72 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHVFSRDKIMTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A + + D Sbjct: 131 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENAD 167 >gi|296131710|ref|YP_003638957.1| hypothetical protein TherJR_0165 [Thermincola sp. JR] gi|296030288|gb|ADG81056.1| conserved hypothetical protein [Thermincola potens JR] Length = 266 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 11/144 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S +++D G+S + I + + ++L AI ITH H DH + Sbjct: 14 SIFIKSDNTSVIVDAGMS--------GKALEAKIQAMGELCESLSAILITHEHSDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +PVY + L+ ++ F+ G +++ + IE+ +H Sbjct: 66 GVLAQRYDLPVYVTEKTWRALQFSL---GKIQEQQVCCFRPGHVLEIDSLKIETFSTSHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKL 168 + + V D Sbjct: 123 AADPVGYVFYEGDTKASIITDTGC 146 >gi|327271542|ref|XP_003220546.1| PREDICTED: 5' exonuclease Apollo-like [Anolis carolinensis] Length = 563 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 101/323 (31%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP +L K + A D+ Sbjct: 28 FLSHMHTDHTVGLSSTWNR---PIYCSPLTGQILRLKLKVSEQWIHPLEVGESHVLALDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + + L Sbjct: 85 IGKETMTVTLIDANH-CPGSVMFLFEGYFGIILYTGDFRYSPNMQQEEALKNKKL----- 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + + I ++++ ++ + + R ++++A Sbjct: 139 --INTLYLDNTNCYPSFVLPSRETATEQIKEVIRAHPSHLVKIGIYT-LGRESLLVELAH 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + IV+ L+ + +G+ ++ S + Sbjct: 196 EFHTWIVVSPRRLE----IMHLLGLDDVFTSEEWAGRIHAVDFSEIRQATMISWNQI--- 248 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + +SR + N + S Sbjct: 249 --------HPTIAVLP------TSRPVKINHPGAYVVP--------------------YS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H +L W++P ++ + Sbjct: 275 DHSSFEELLEFVAWLKPCSIIPV 297 >gi|156082980|ref|XP_001608974.1| RNA-metabolising metallo-beta-lactamase and metallo-beta-lactamase superfamily domain containing protein [Babesia bovis T2Bo] gi|154796224|gb|EDO05406.1| RNA-metabolising metallo-beta-lactamase and metallo-beta-lactamase superfamily domain containing protein [Babesia bovis] Length = 760 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 68/473 (14%), Positives = 139/473 (29%), Gaps = 98/473 (20%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGLLEAKRVYE------ 112 + N+ I+H H DH GAL L PV+ + GL Sbjct: 114 LNDITSNIDCAIISHFHLDHIGALPFLTEHLGYKGPVFMTYPTRGLGPIMLRDSAQVVTS 173 Query: 113 -------------------RVSKKIPCISFQAGDKVDVGAFSIESVRVN----------- 142 +KK ++ + D+ D ++++ V + Sbjct: 174 RFRDAIETESSTRGASILLNRNKKRKPLTAEQLDRFDPWGYTVDCVADSLSRAHVMQLKS 233 Query: 143 --------------HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ ++++TGD+ + D LG + + Sbjct: 234 SQTLGNMRITPYYAGHVLGAAMFLVECDGISVLYTGDFNMTPDKHLGP-------ARVPS 286 Query: 189 EGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII-- 244 ++C+ST A R+ +E + ++D A G VL+ F+ V R + + Sbjct: 287 LNPDIMICESTYASIIRQARRSTEMELCTVVHD-CLLAGGKVLIPVFA--VGRAQELAII 343 Query: 245 ---DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ R + G L + + + D + + + E ++ Sbjct: 344 LDTYWSKLQLRFPIYFGGGLSERATSYYKLHSLWTDSRNIPNMGDNCFSLEHMLPFENSF 403 Query: 302 QGEPRSA-LAQLSRGEMRNVKLAEKDTV-----------IFSSRAIPGNE----VAIGHI 345 E R L + L ++ + PGN+ + Sbjct: 404 LTEDRPMVLFATPGMVHSGLSLKACKLWAPNPKNLIVVPGYAVQGTPGNKLISGEKVIKT 463 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 + E +V + S H + R+ + + P+ LV +HGE + + Sbjct: 464 SSGSFEVKCKVRY------LSFSAHADSAGIMRLIKHTKVQPKNLVLVHGEYDGMKKFAK 517 Query: 404 LALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA 456 +P + + D V L + A L + Sbjct: 518 HVNM--DVNIPVFHPANGQEIAVTLAQTEDMV---PVYHYPELNIEVAGLTLR 565 >gi|295695641|ref|YP_003588879.1| Hydroxyacylglutathione hydrolase [Bacillus tusciae DSM 2912] gi|295411243|gb|ADG05735.1| Hydroxyacylglutathione hydrolase [Bacillus tusciae DSM 2912] Length = 219 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 60/175 (34%), Gaps = 30/175 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+ E LV E+G N + ++ID G P + P + Sbjct: 1 MRVERLVI------NEMGTNCYIVS---GEDGGAVVIDPG--GPLE---------PIEDY 40 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERV 114 + K+ + AI +TH H DH L L PVY +L + V Sbjct: 41 LQKQGLVVRAILLTHGHADHLAGLEALRERTGAPVYVHEADAEMLTDPARNLSAFMGRPV 100 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI----VHTGD 165 + + GD ++VG ++ + P + L I I V TGD Sbjct: 101 ICRPADHRLKDGDVLEVGGLMVKVLHTPGHTPGGVCLDIAPQGAFIHPRVVFTGD 155 >gi|289207593|ref|YP_003459659.1| hypothetical protein TK90_0408 [Thioalkalivibrio sp. K90mix] gi|288943224|gb|ADC70923.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 254 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 67/229 (29%), Gaps = 45/229 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G N + GS +++DCG S + I + Sbjct: 2 IRFCSLGSGS--GGNALVVEIGSTR----LLVDCGFSVQE---------------IERRL 40 Query: 66 -------KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 +L A+F+TH H DH G+ L + VYAS S Sbjct: 41 ARQGRAASDLDAVFVTHEHGDHLGSAPALSRRYDLRVYASAGTRLAARD-------SAFA 93 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 Q V++ I V H E +V D I + Sbjct: 94 HLEEIQPDIPVELDDALIIPYTVPHDAREPTQFAFSDGASRLV----LMTDAGHISPHMI 149 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D A G +G+L + G +K+ I D + Sbjct: 150 D----TASGAQGLLLECNHCPEMLASGRYP--AKLKRRIADGYGHLPNH 192 >gi|311695271|gb|ADP98144.1| metallo-beta-lactamase family protein [marine bacterium HP15] Length = 463 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 117/393 (29%), Gaps = 43/393 (10%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + S + I+IDCG+ +D+ G I F ++ + A+ Sbjct: 8 GATSGVTGSCHELSLSRGSQKSGILIDCGLFQGQDEGRGASASDLSIDFPIEH---IRAL 64 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE---RVSKKIPCISF---- 123 +TH H DH G + L + P+ S + +L ++ I Sbjct: 65 VVTHVHIDHVGRIPYLLAAGFDGPIICSEPSAIMLPEILEDALKIGFTRDRQLIERVLGL 124 Query: 124 -----------QAGDKVDVGAF--SIESVRVNHSIPETMALVIRSPV---GNIVHTGDWK 167 Q G S+ R H + IV +GD Sbjct: 125 IRSRLVPVPYGQWHSVFAEGDCSLSVRLQRAGHILGSAYVECDAREGETEERIVFSGDLG 184 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKG 226 +L + L+ +ST ++ + + K + + G Sbjct: 185 APHAPLLPAPQSPER--------ADRLVIESTYGDKDHEDRETRRYRLKAVLEHALEDGG 236 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 VLV FS + R + ++ E + I G L + +D + + + + Sbjct: 237 TVLVPAFS--IGRTQELLYEIESL---IHEFGGELWNNPEIVVDS-PLAAEFTRIYRDLK 290 Query: 287 GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIGHI 345 + E ++ G L +S E + + G+ + A G I Sbjct: 291 PYWDAEATELVKQGRHPLSFEQLTVISSHEEHLNAVDYLARSHRPCVVLAGSGMCAGGRI 350 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 N L + +G P + L Sbjct: 351 VNYLKAMLGDKRNDVLFVGYQAAGTPGRDILNY 383 >gi|260438919|ref|ZP_05792735.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] gi|292808570|gb|EFF67775.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] Length = 531 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 13/107 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + +G E+ + + ++I++DCG+ DD +L Sbjct: 1 MRLIFIGADHEVTGSCHVLEVC----GRYILVDCGMEQGTDDFETAELPM--------NI 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 ++ + +THAH DH G L L++ V A+P + L + Sbjct: 49 ADIDYVLLTHAHIDHSGMLPLLYARGFRGDVIATPATVDLCDIMLKD 95 >gi|134095357|ref|YP_001100432.1| putative metallo-beta-lactamase family protein [Herminiimonas arsenicoxydans] gi|133739260|emb|CAL62309.1| Putative metallo-hydrolase/oxidoreductase superfamily protein [Herminiimonas arsenicoxydans] Length = 261 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 16/162 (9%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F LG E N L S ++R +M+DCG + + + + Sbjct: 1 MRLKFASLGSGSE--GNALLISTQSGTTRTTVMLDCGFGIRETER--------RLERLQL 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L I +TH H+DH G + +PV+ + + + Sbjct: 51 LPADLAGIIVTHEHQDHVGGVFKFARRHRLPVWLTFGTYQATRDRC------DDVEIHIC 104 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G +G + V H E + V + D Sbjct: 105 RDGAVFAIGDLELSPYTVPHDAREPVQYVASDGALRLGVLTD 146 >gi|89094078|ref|ZP_01167021.1| Predicted exonuclease of the beta-lactamase fold [Oceanospirillum sp. MED92] gi|89081553|gb|EAR60782.1| Predicted exonuclease of the beta-lactamase fold [Oceanospirillum sp. MED92] Length = 377 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 117/371 (31%), Gaps = 41/371 (11%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + I+IDCG+ + G D F I + A+ +TH H DH G + L Sbjct: 22 DNDDNSILIDCGLFQGAEVGSGEDKPF----HIEFPLSRVSALVVTHCHIDHVGRIPYLL 77 Query: 89 SF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCISF------------QAGDKVDV 131 + P++ + L +E +K I + + V V Sbjct: 78 AAGFDKPIFVTVATAKLLPLVIEDALK-VGFTKDQQLIEQVLDLLSSLIVPVEYNEWVQV 136 Query: 132 GAFSIESVR--VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 F+ E +R V I + + ++ P +V +GD +L + Sbjct: 137 PGFNAEGIRFQVAGHILGSAYVEVQLPTERVVFSGDLGAPHSPLLPSP--------KPPQ 188 Query: 190 GILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ +ST + ++ + + + + + G VL+ FS + R + ++ E Sbjct: 189 YADTLVIESTYGDKLHESREDRANRLRGVVEHCLSNAGTVLIPAFS--IGRTQELLYEIE 246 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 I +G + + + + E GL+ E + G Sbjct: 247 H---IIHKVGRDWENL--DVVVDSPLAAKFTEHYRELKGLWDDEASERVEAGRHPLSFEQ 301 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI-GHIKNRLVEQGVRVIAEDAECPVHV 367 L + E + + I + + + G I N L + Sbjct: 302 LITIDSHEDHLRLVEYLKASGRPAIVIAASGMCVGGRIVNYLKVLLDDPKTDVLFVGYQA 361 Query: 368 SGHPYPNDLKR 378 G P + K Sbjct: 362 KGTPGRDIQKY 372 >gi|91975920|ref|YP_568579.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] gi|91682376|gb|ABE38678.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 540 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 12/110 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F G + + L+ + ++DCG+ F +L + F Sbjct: 4 TIRFC--GAARTVTGSCYLFE----TRTGRFLVDCGL-FQGQKTLK-ELNYGAFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 + A+ +THAH DH G L L P++A+ I L Sbjct: 53 PSAVDAVLLTHAHIDHSGLLPKLLRDGFQGPIFATRGTIDLCSYMLPDAG 102 >gi|331090639|ref|ZP_08339490.1| hypothetical protein HMPREF9477_00133 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401079|gb|EGG80674.1| hypothetical protein HMPREF9477_00133 [Lachnospiraceae bacterium 2_1_46FAA] Length = 207 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 56/151 (37%), Gaps = 20/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + ++++ I+ID G ++++E+ N+ I +TH H D Sbjct: 14 NCYVVH--NETTKEAILIDPGACSKNLK-----------DYLLEEKLNVKGILLTHGHFD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG-----DKVDVGAF 134 H L L VPVY L+E + + + + +A +++ + Sbjct: 61 HILGLDGLLQMFDVPVYVHEEEKELIEDAVLNQSKTYTEGYVFTKAQYVKDGQMLNLIGY 120 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + ++ ++ +GD Sbjct: 121 DFQVIHTPGHTKGSACYYVKEEE--VLFSGD 149 >gi|260887568|ref|ZP_05898831.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|330837941|ref|YP_004412521.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|260862743|gb|EEX77243.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|329745705|gb|AEB99061.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 292 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 23/170 (13%) Query: 28 SPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 ++ID G+S GVD +L +FITH H DH Sbjct: 55 IELDGTRLLIDAGISARRITRSLADLGVD------------AASLDGVFITHEHSDHIKG 102 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L L H+P++A P + + V +GA S++S H Sbjct: 103 LPTLLKQYHLPLFAPPATLRAIRESLA------VPEDTFTPLTGNVMLGAVSVKSFSTLH 156 Query: 144 SIPETMALVIRSPVGNIVHTG-DWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + + T + +D + D L A + +L Sbjct: 157 DAVSPVGYAVCGSEKCALATDLGFLTNDVMTAIEGADALILEANHDRELL 206 >gi|229025725|ref|ZP_04182129.1| Metallo-beta-lactamase [Bacillus cereus AH1272] gi|228735600|gb|EEL86191.1| Metallo-beta-lactamase [Bacillus cereus AH1272] Length = 239 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + + I+ D G G LV T++ + + Sbjct: 36 MPLGPLQ---TNAYIL---TNNQNECIIFDPG-------HEGEKLV----TYLQEAQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + +PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFRIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 139 QIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 184 >gi|220932858|ref|YP_002509766.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219994168|gb|ACL70771.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 263 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 62/204 (30%), Gaps = 34/204 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFP 56 M + L G G N G + I++D G+S + GVD Sbjct: 1 MSVN-VSVLASGSSG----NCVYITDGKVN----ILVDAGLSGKEIARRLKKVGVD---- 47 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 N+ AI +TH H+DH + L +PV+A+ E + Sbjct: 48 --------PGNIDAILVTHEHKDHIKGVGILSRRYDIPVFANELTWKAAEPCLGEIK--- 96 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAIL 174 +G + +H + + V + + D D+ Sbjct: 97 --SNNCKIFDGDFSIGNLGVIPFSSSHDAEDPVGFVFKCRNLKLGLATDMGIMPDEAKAY 154 Query: 175 GDVTDKDSLCAIGNEGILALMCDS 198 +D + A + + LM S Sbjct: 155 LKGSDLLIIEANHD--LDMLMTGS 176 >gi|291546658|emb|CBL19766.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Ruminococcus sp. SR1/5] Length = 538 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 75/467 (16%), Positives = 152/467 (32%), Gaps = 111/467 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + Y ++ + ++D G+ PD + + Sbjct: 1 MKITFIGATHEVTGSC----YYLEAAGRKFLVDYGMEQG-----------PDYY---ENK 42 Query: 66 K------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV-------- 110 + +L + +THAH DH G L L++ P+YA+ L + Sbjct: 43 ELPVAPGDLDFVLLTHAHMDHSGNLPALYAKGYQGPIYATEATCNLCDIMLRDSAHIQMF 102 Query: 111 ----------------------YERVSKKIPCISFQAGDKV--DVGAFSIESVRVNHSIP 146 E + DK+ + V H + Sbjct: 103 EAEWRNRKGRREGKPEFIPAYTMEDAMGVLRNFVRCPYDKIIKPAEGIEVRFVDAGH-LL 161 Query: 147 ETMALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + ++ + + IV +GD D ++ D + ++ +ST Sbjct: 162 GSSSIEVWMTEEDKTEKIVFSGDIGNIDQPLIRDP--------VYIREADYVVMESTYGD 213 Query: 203 R-EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 R G I I + G +++ +F+ V R + ++ QI + ++ G Sbjct: 214 RSHGERPDYPAILAEIIQRTFDRGGSLVIPSFA--VGRTQEMLYFIRQIKEQGLVHGHD- 270 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNV 320 +V +D + + S+ ++ Y E + ++ G L ++ + R + Sbjct: 271 --GFTVYVDSPLANEATTIFSENAYTCYDEEAMDLLNKGINPLSFQGLKTSVTTDDSRAI 328 Query: 321 KLAEKDTVIFSSRAI-------------------------------PGNEVAIGHIKNRL 349 E VI S+ + PG + G ++ +L Sbjct: 329 NFDEDCKVIISASGMCDAGRIKHHLKHNLWNPRNTILFVGYQAIGTPGRALLEGAVELKL 388 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW--IRPQVLVAIHGE 394 + V+V AE + P +SGH N L + RP+ + HG+ Sbjct: 389 FGETVQVAAEICKMP-GISGHADVNGLIEWAKAFETRPKHVFVTHGD 434 >gi|310659851|ref|YP_003937572.1| metallo-beta-lactamase family protein [Clostridium sticklandii DSM 519] gi|308826629|emb|CBH22667.1| metallo-beta-lactamase family protein [Clostridium sticklandii] Length = 264 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 74/249 (29%), Gaps = 31/249 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM---AIFITH 75 N S+ I++D G+S K + + + +L I +TH Sbjct: 14 GNCHYIE----KSKTKILVDAGLSGKKIE-----------EHLRQHHVDLSTLGGIMVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH + + VPV+A+ +E K F + +G Sbjct: 59 EHSDHIKGVGIISRRYDVPVFATIKTWESMENCL---GKIKPENKRVFTPYESFSIGDIE 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDVTDKDSLCAIGNEGILA 193 I +H ++ I + D D ++ L + +E +L Sbjct: 116 INPFSTSHDAVDSCGFAISDGKNKLSIATDLGCVTDKVMEYISHSELVILESNHDEQMLK 175 Query: 194 LMCDSTN----AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS----VSRIRSIID 245 + + E +S + K VL+ S V +++ Sbjct: 176 MGSYPYYLKQRVLSEFGHLSNADAGDVAAKLAKLGTKAVLLAHLSQENNMPVLAYQTVAS 235 Query: 246 IAEQIGRKI 254 I E+ G Sbjct: 236 IMEEQGVYA 244 >gi|229019482|ref|ZP_04176303.1| Metallo-beta-lactamase [Bacillus cereus AH1273] gi|228741837|gb|EEL92016.1| Metallo-beta-lactamase [Bacillus cereus AH1273] Length = 221 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + + I+ D G G LV T++ + + Sbjct: 18 MPLGPLQ---TNAYIL---TNNQNECIIFDPG-------HEGEKLV----TYLQEAQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + +PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVRDAFRIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 121 QIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 166 >gi|227889093|ref|ZP_04006898.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200] gi|227850322|gb|EEJ60408.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200] Length = 268 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 28/185 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFP 56 MKN ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKNVKVSVLSSGSTG----NSTLIE----TEQHKILMDAGLSGKKTKDLLAQVGVDI--- 49 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERV 114 K++ IFI+H H DH G L L + YA+ L+E+K++ Sbjct: 50 ---------KDIDMIFISHDHTDHSGGLGVLMRRYPQISAYANSGTWNYLIESKKI--GN 98 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 +F++G G + S +H E V S D + Sbjct: 99 LPVEQINTFESGVTKTFGDLDVTSFATSHDAAEPQYYVFSSVGKRFACLTDTGYVSSTVK 158 Query: 175 GDVTD 179 G++ D Sbjct: 159 GEIKD 163 >gi|88800196|ref|ZP_01115764.1| Beta-lactamase-like protein [Reinekea sp. MED297] gi|88777042|gb|EAR08249.1| Beta-lactamase-like protein [Reinekea sp. MED297] Length = 255 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 22/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G G N L ++ + ++DCG G+ + + Sbjct: 1 MRVASLG-SGSKG-NATLLE----AAGDYFLVDCG--------FGLKEIEARLRNRGVHP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L I +TH H DH L + +P++ + L+ + F Sbjct: 47 DELKGILVTHEHGDHIKGAPMLANRYQIPLWTTYGTARHLKR--------EVPTLHRFMP 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ +G +E+V V H E + R D Sbjct: 99 NTRLSLGQLEVETVTVPHDSAEPSQFLFRHQGLTFGLLTD 138 >gi|294340133|emb|CAZ88504.1| putative mRNA Cleavage and polyadenylation specificity factor [Thiomonas sp. 3As] Length = 460 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 65/461 (14%), Positives = 132/461 (28%), Gaps = 84/461 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ + + K ++IDCG+ +L + D F + K++ + +THAH Sbjct: 10 RNVTGSCHLLHAQGKRVLIDCGMFQGSHELDEENAE--DFGF---DPKSIDLLLLTHAHL 64 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC----------- 120 DH G + L + + L A E + Sbjct: 65 DHCGRIPLLVKRGFRGEIITTAATRELTRVVLLDAAHLQEEEAERNTRHAHRRGDAQAQP 124 Query: 121 ---------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 + G +++ S H I + ++ I + Sbjct: 125 LYTTLDALNALEFFGRTAVYGQTLELAPGLSATFFDAGH-ILGSASIRIEQTASGAHRSV 183 Query: 165 DWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 + D + + D +++ ++T R E I + I + Sbjct: 184 IFSGDLGNGGHAVLRDPQL-----PPRADSVVMETTYGDRLHK-PIEPSIAELFAAISET 237 Query: 224 AK--GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 K G V++ TF+ + R + I+ + G + L +L + + + + + Sbjct: 238 LKRGGNVVIPTFA--LERAQEILFYLRE-GLEAGKLPRTLPVFLDSPMAISATEIFRHH- 293 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA 341 + L + P + + + +L ++ S G V Sbjct: 294 --PECYGNAIDALFRAGSDPFSLPGLRFTREAADSIALNRLVGGAVIMAGSGMATGGRVR 351 Query: 342 IGHIKNRLVEQGVRVIAEDA---------------------ECPVHV--------SGHPY 372 N + V A E PVH S H Sbjct: 352 HHLRHNLGRHESSVVFVGYAARGTLARLLIDGAKKVKLFGEEIPVHARLYTINGFSAHAD 411 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 +L Q ++P+ + +HG+P + L + Sbjct: 412 QRELLAWQQALKPEQTILVHGDPDSMDVFAALLKNTRVQRP 452 >gi|116511251|ref|YP_808467.1| beta-lactamase superfamily hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|125623279|ref|YP_001031762.1| ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|116106905|gb|ABJ72045.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactococcus lactis subsp. cremoris SK11] gi|124492087|emb|CAL97016.1| Ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|300070029|gb|ADJ59429.1| ribonuclease Z [Lactococcus lactis subsp. cremoris NZ9000] Length = 270 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 11/172 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K + ++ I ++ ++ A+ ITH H DH + Sbjct: 20 SFYLETPKKKILVDAGLSGKKIESL--------LSEIDRDIHDIDALLITHEHSDHIKGI 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ L+ K ++ + F+ G + G IES V+H Sbjct: 72 GVLARKYGINLYANEDTWSELDGKNALGKIPLE-QKHLFEMGKTMTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + V D + D + D + + + IL + Sbjct: 131 AIAPQFYRFMKDDKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEILRM 182 >gi|323126807|gb|ADX24104.1| zinc-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 269 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKRLLIDAGLTGKKITSLLAE--------IDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI ITH H DH + + H+ VYA+ ++ + FQ Sbjct: 51 PEDLDAILITHEHSDHIKGVGVMARKYHLDVYANEKTWQFMDER-NMLGKLDASQKHIFQ 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + G IES V+H + I + V D + D + + D Sbjct: 110 RDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENAD 166 >gi|207743512|ref|YP_002259904.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum IPO1609] gi|206594910|emb|CAQ61837.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum IPO1609] Length = 261 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 22/182 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L ++ I++DCG G+ + + Sbjct: 3 VRFASLGSGSE--GNALLVESSDGATSTRILLDCG--------FGIRETVRRLERLGCAP 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCI 121 ++L AI +TH H DH G+ + + ++PV+ S L R + + Sbjct: 53 ESLSAILVTHEHGDHVGSAYAFAAKYNIPVWTSHGTYRATASL--------RGADRAAIR 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 +A D +G + V H E + + + D + + + G +T Sbjct: 105 FCRADDVFSIGDLRVLPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLH 164 Query: 182 SL 183 + Sbjct: 165 AF 166 >gi|146306316|ref|YP_001186781.1| beta-lactamase domain-containing protein [Pseudomonas mendocina ymp] gi|145574517|gb|ABP84049.1| beta-lactamase domain protein [Pseudomonas mendocina ymp] Length = 467 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 96/283 (33%), Gaps = 67/283 (23%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---KDDLPGVDLVFPDITFIMKERKN 67 LG + ++ + L ++++CG+ ++D + + + ++ Sbjct: 7 LGAIQQVTGSCYLVE---SRDGARVLLECGMHQGRREEEDQ--------NRSAFPFDPRS 55 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERV 114 L A+ I+HAH DH G L L + P++A+ + LLE R Sbjct: 56 LDAVVISHAHLDHSGLLPRLVAEGYRGPIHATEASCELLELMLLDSAFLQEKDAEWENRW 115 Query: 115 SKKIPCISFQAGDKV--------------------DVGAFSIESVRVNHSIPETMALVI- 153 + + + + + H I + + + Sbjct: 116 RARQGKPAIKPLYTIANAEQALSQRRPHAYGVAVEVAKGVQVTFHNAGH-ILGSAIVEMQ 174 Query: 154 ---RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 ++V +GD ++ + L+ +ST R+ SE Sbjct: 175 VEDHHLHRHLVFSGDLGNTCSPLMQAPAQLNK--------ADVLLMESTYGDRDHRD-SE 225 Query: 211 KGIKKNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQI 250 +++ + DI++ A G VL+ +F+ V R + +I + Sbjct: 226 ATLEE-LADILQQAHRDGGNVLIPSFA--VGRTQDLIYYLGRF 265 >gi|225374422|ref|ZP_03751643.1| hypothetical protein ROSEINA2194_00037 [Roseburia inulinivorans DSM 16841] gi|225213660|gb|EEG96014.1| hypothetical protein ROSEINA2194_00037 [Roseburia inulinivorans DSM 16841] Length = 242 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 15/157 (9%) Query: 36 MIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 +ID G+S ++ L +DL D+ I ITH H DH L + + Sbjct: 2 LIDAGISGKRIENGLNSIDLKTADMQ----------GILITHEHIDHIAGLGVIARRYGI 51 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 P+YA+ + + + ++ + +G +IE V ++H + +A I Sbjct: 52 PMYATGETVDAILHT-KTVGKIDEALFQVIESEREFTIGDLTIEPVSISHDAADPVAYKI 110 Query: 154 RSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGN 188 R N+ D D D L A + Sbjct: 111 RQQEKNVAVMTDLGTYDDHIVEKLQNVDVLLLEANHD 147 >gi|15616585|ref|NP_244891.1| hypothetical protein BH4023 [Bacillus halodurans C-125] gi|10176648|dbj|BAB07742.1| BH4023 [Bacillus halodurans C-125] Length = 264 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 70/210 (33%), Gaps = 17/210 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ +++D G+S K D I + L I +TH H DH + + Sbjct: 19 VETDKQKLLVDAGLSGKKMDEL--------FQKIDCDPSQLNGILVTHEHSDHIKGVGIV 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++P+YA+ +E F+ G+ +ES V+H E Sbjct: 71 ARKYNLPIYANAKTWQAMEKAL---GTLTTDQRFHFEIGEVKTFADLEVESFGVSHDAAE 127 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDSTNA 201 M V +V D + + + D A + +L + Sbjct: 128 PMFYVFHHDGKKLVLATDMGYVSERIKKTIENADTLIFEANHDLNMLRMGRYPWNVKRRI 187 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + +S + + +++ + + + Sbjct: 188 LSDVGHVSNEDAAYALAEVIGDRTERIYLA 217 >gi|291535127|emb|CBL08239.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Roseburia intestinalis M50/1] Length = 265 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 17/182 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S ++ID G+S ++ L +DL + + + + +TH Sbjct: 12 GNCICVG----SDENHVLIDAGISGKRIENGLNSIDL----------KTEEMQGVLVTHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + + +YA+ I + ++ + ++G I Sbjct: 58 HIDHISGLGVIARRYGLSIYATQGTIDAILNT-KSVGKIEESLFHAITPDQPFEIGDLLI 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 E + ++H + +A I++ D D+ ++ + + D L N + L Sbjct: 117 EPISISHDAADPVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEANHDVHMLQV 176 Query: 197 DS 198 S Sbjct: 177 GS 178 >gi|154482686|ref|ZP_02025134.1| hypothetical protein EUBVEN_00362 [Eubacterium ventriosum ATCC 27560] gi|149736462|gb|EDM52348.1| hypothetical protein EUBVEN_00362 [Eubacterium ventriosum ATCC 27560] Length = 207 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 20/158 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + + + ++D P ++ + + K +AI +TH H D Sbjct: 17 NCYL--CKNKETGEGFIVD-----PGENELKISVNI------SKMEMKPVAIILTHGHYD 63 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF-----QAGDKVDVGAF 134 H GA++ L + VY S L+ K++ P + G K+ + Sbjct: 64 HIGAVNALKERYGIKVYVSEAEKELIGNKKMNLSSYFDSPMTIEADEFLKDGQKITLAGI 123 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 ++ + P + + I+ +GD Sbjct: 124 NMTFIATPGHTPGSGCYYL--EDNEILFSGDTLFHGSR 159 >gi|242279879|ref|YP_002992008.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] gi|242122773|gb|ACS80469.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] Length = 535 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 68/489 (13%), Positives = 126/489 (25%), Gaps = 87/489 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G + + + + +DCG+ ++ + + Sbjct: 1 MKITFMGAAKTVTGSCYIIE----TENTRFAVDCGLHQGNAEIEKRNRGIAEYD-----P 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 KNL I ITHAH DH G L P+Y + LL+ + Sbjct: 52 KNLDFILITHAHIDHTGLLPAAVRAGFKGPIYMTTPTRDLLDIMLLDSAYIQEMETEWAN 111 Query: 112 -ERVSKKIPCISFQAGDKVDVG------------------AFSIESVRVNHSIPETMALV 152 +R+ K + IS + ++ H I + + Sbjct: 112 RKRLRKGMSPISPIYQQDDALKTVPLMRTVQYGASFDPSEDVTVNFKDAGH-ILGSAFIE 170 Query: 153 IRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD D ++ E L+ +ST R Sbjct: 171 LWIKEGGETTKVVFSGDLG-HKDQLIVRNPSI-------IEKADYLLMESTYGDRNHKDS 222 Query: 209 SEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLG 258 S + + I G V++ F+ V R + +I + L Sbjct: 223 SNSLNELAEAI-KWSYERGGKVVIPAFA--VERSQQLIYTLHLLYKDGKLPADMPVYLDS 279 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGL----------YPREQLIVIATGSQGEPRSA 308 R + + + E+ I + Sbjct: 280 PLAIRATEIFRNHPEFFDLDTKELMHNGDDPLSLPNLKFTLTTEESQAINNTEGPAIIIS 339 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE---VAIGHIKNRLVEQGVRVIAEDAECPV 365 + ++ L SS G + + N + E + Sbjct: 340 ASGMANAGRIKHHLRHNIWRKDSSVVFVGYQGVGTPGRKLVNGADSITIFGEKLAVEAKI 399 Query: 366 HV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 SGH +++ + ++ HGEP L QE V Sbjct: 400 FTINGFSGHAGQDEMIDWLKHFDSPAMKVILTHGEPKGQKVLAGLIKQELGYKVHIADYR 459 Query: 420 KMLRLFPDP 428 + L L P Sbjct: 460 EELMLVPGG 468 >gi|186476183|ref|YP_001857653.1| beta-lactamase domain-containing protein [Burkholderia phymatum STM815] gi|184192642|gb|ACC70607.1| beta-lactamase domain protein [Burkholderia phymatum STM815] Length = 257 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG F + V + + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCG--FSGKE------VARRLERLGAGV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI ITH H DH G+ L L +P+Y S + A + Sbjct: 51 DELDAILITHEHSDHIGSALTLARKLSIPLYMSWGTARAVGA------DESNVDLRVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + D Sbjct: 105 DEVVAIGDLSVLPYTVPHDAREPLQYVFSDGASRLGVLTDVGT 147 >gi|88604114|ref|YP_504292.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189576|gb|ABD42573.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 285 Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 57/180 (31%), Gaps = 11/180 (6%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 R + I ITH H DH L L + L V Y + + + K S Sbjct: 51 NRDLIEGILITHEHGDHVKGLGPLGNALKVSAYGTSGTLDVTNRMIQ---TKKNFTFQSV 107 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKD 181 GD +G F++ + V+H + + +I I + D + +D Sbjct: 108 HPGDPFSIGDFTVTAFSVSHDATDPVGYLIEEGGLRICYCTDTGVVTSGMMEMIKKSDGV 167 Query: 182 SLCAIG-----NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 L + +G A G +E + +I ++ +L + Sbjct: 168 ILESNHCPQMLKDGPYPAFLKRRIASSRGHLSNE-DAGMVLAEISRSIHCAILAHLSEEN 226 >gi|323486962|ref|ZP_08092277.1| hypothetical protein HMPREF9474_04028 [Clostridium symbiosum WAL-14163] gi|323692009|ref|ZP_08106257.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14673] gi|323399734|gb|EGA92117.1| hypothetical protein HMPREF9474_04028 [Clostridium symbiosum WAL-14163] gi|323503932|gb|EGB19746.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14673] Length = 533 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 64/478 (13%), Positives = 136/478 (28%), Gaps = 107/478 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDDLPGVDLVFPDITF 60 + +G E+ + L + I++DCG+ F +LP I++ Sbjct: 1 MRLTFIGADHEVTGSCHLLQACGLN----ILVDCGMEQGINKFENAELP--------ISY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + +TH+H DH G L +++ V + L E ++ Sbjct: 49 -----SDVDYVLVTHSHIDHVGMLPFIYARGFRGQVMGTRATCDLCEIMLRDCAHIQETE 103 Query: 119 ------------------------------PCISFQAGDKVDVG-AFSIESVRVNHSIPE 147 + + + F I V H + Sbjct: 104 AEWKNRKAKRAGKSEVPPLYTMNDANGVLEHFVPCNYDQIIKLKEGFEIRFTDVGH-LLG 162 Query: 148 TMALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + ++ I + IV +GD + ++ ++ +ST R Sbjct: 163 SASIEIWMTEEDCSKKIVFSGDIGNKNKPLIRSPQYIH--------QADYVVMESTYGDR 214 Query: 204 EGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 + + + + + G V++ F+ V R + +++ +I K ++ G Sbjct: 215 FHKHTGDHVEEFAKVIEETLDRGGNVVIPAFA--VGRTQEVLNYIREIKEKHLVKGHD-- 270 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN-VK 321 V +D + + + Y E +I G L + + Sbjct: 271 -NFPVYLDSPMAVEATAVFKENMMDCYNDETKALIKKGINPISFPGLRLSVTSDDSIAIN 329 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA----------------------- 358 E+ VI S+ + H+K+ L ++ Sbjct: 330 FDEEPKVIISAAGMCDAGRVRHHLKHNLWRPECTILFAGYQAVGTLGRSIVEGREEVKLF 389 Query: 359 -------EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 E +SGH L RP+ + +HG+ + Sbjct: 390 GESIEVKAHIEKIEGISGHADQTGLLEWVGSFMERPKHVFVVHGDDEVCDTFAATVKE 447 >gi|317128381|ref|YP_004094663.1| beta-lactamase [Bacillus cellulosilyticus DSM 2522] gi|315473329|gb|ADU29932.1| beta-lactamase domain protein [Bacillus cellulosilyticus DSM 2522] Length = 212 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 87/234 (37%), Gaps = 42/234 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK ++L PLG + G Y + +MID G + + + Sbjct: 1 MKWKKL---PLGPLQTNG-------YVVYENGTGVMIDPG---GDEGRL--------LNW 39 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP-FAIGLLEAKRVYERVSKKIP 119 + E ++ A+ +THAH DH GA+ + P+Y L++ + + + I Sbjct: 40 LKSEDIHIQAVLLTHAHFDHIGAVERIKKEFSAPLYVHKNEQQWLVDPQLNGSGLFQGIT 99 Query: 120 CISFQAGDK-------VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 IS + ++VG F+ + P +++ + P +++ +GD Sbjct: 100 PISVGEAEHLITKEGPLEVGPFTFQVYTTPGHSPGSVSYYL--PESHVIFSGDVLF---H 154 Query: 173 ILGDVTDK-----DSLCAIGNEGILALMCDSTNAMREGTCIS---EKGIKKNIY 218 TD ++L + L+L ++ A G + EK I I Sbjct: 155 GGVGRTDLPGGSQETLMDTIHNKFLSLPDETIVANGHGPVTTIGEEKEINPFIN 208 >gi|254785151|ref|YP_003072579.1| metallo-beta-lactamase family protein [Teredinibacter turnerae T7901] gi|237687451|gb|ACR14715.1| metallo-beta-lactamase family protein [Teredinibacter turnerae T7901] Length = 254 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 20/153 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N + G +++DCG + + + + + ++ A+ Sbjct: 9 GSGSRG-NATVVRVGDQC----LLVDCGFTLRELEK--------RLALLELSAADITAVL 55 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH + L +PVY + + + K + + Sbjct: 56 VTHEHADHIKGVGPLARRHTIPVYMTSGS--FISGKCGEI-----PHFRAVLPDQPFQIH 108 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ V V H E V + D Sbjct: 109 DITVTPVAVPHDAREPCQFVFSYQGMKLGILTD 141 >gi|222110500|ref|YP_002552764.1| beta-lactamase domain-containing protein [Acidovorax ebreus TPSY] gi|221729944|gb|ACM32764.1| beta-lactamase domain protein [Acidovorax ebreus TPSY] Length = 470 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 70/484 (14%), Positives = 134/484 (27%), Gaps = 85/484 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG E+ + L ++DCG+ G + Sbjct: 1 MKLNF--LGAAREVTGSCFLVEAL----NLRFLVDCGMV-----QGGRTAAARNREPFTF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 + ++ + +THAH DH G L L +YA+P + LL Sbjct: 50 DPASIDFVLLTHAHIDHSGLLPKLTRAGFKGAIYATPATVDLLGVMLPDSAHIQESDAKR 109 Query: 106 --EAKRVYERVSKKIPCISFQAGDKVDVG-----------AFSIESVRVNHSIPETMALV 152 + R + + + + G H I + + Sbjct: 110 SAKRSRGEDALPPLYTLQDARECLQQVRGIEYDREFAPRVGVRARFRDAGH-ILGSAIIE 168 Query: 153 IRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +V +GD IL D T E L+ +ST R+ + Sbjct: 169 VWVTEYGYPTKLVFSGDLGQPGRPILRDPT--------PIEDADILVIESTYGNRQHKDL 220 Query: 209 S--EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE------QIGRKIVLLGSS 260 S E+ + + + G V+V F+ V R + ++ ++ + V + S Sbjct: 221 SATEEEMIGIVEKTLFERGGNVIVPAFA--VGRTQEVLYHLHRLTSEGRLRQPKVFVDSP 278 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-------------- 306 + + + D+ + + T S E Sbjct: 279 MATEATRITREHLELFDEQAKRLAGWHARGENLPYLHFTESAEESMTLNQIRSGAIIISA 338 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 S + R + + + + +H Sbjct: 339 SGMCDAGRIRHHLRHNLPRKECSVLFSGFQAQGTLGRQLVDGAQRVRIFGDDIPVRAAIH 398 Query: 367 ----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 +S H L + + P+ +HGEP EL Q+ V +G+ Sbjct: 399 SVDGLSAHADQPALMAWARGFKQAPEQTFVVHGEPSAAQNFAELLQQQLGWQVSVPEHGQ 458 Query: 421 MLRL 424 ++ Sbjct: 459 VVPW 462 >gi|332367143|gb|EGJ44879.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1059] Length = 266 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IGRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L + +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYLLDIYANKATW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|307296692|ref|ZP_07576511.1| RNA-metabolising metallo-beta-lactamase [Sphingobium chlorophenolicum L-1] gi|306877821|gb|EFN09046.1| RNA-metabolising metallo-beta-lactamase [Sphingobium chlorophenolicum L-1] Length = 482 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 72/460 (15%), Positives = 132/460 (28%), Gaps = 88/460 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + L LG G + + Y I++D G+ F DL + I Sbjct: 29 DGLGVAFLGASGTVTGS----RYLVDDGETQIVVDSGL-FQGPR----DLRRLNWASIPP 79 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK----- 117 E ++ + +THAH DH GAL + V A+ L E ++ Sbjct: 80 EVADVGQVLLTHAHLDHSGALPRMARLGWDGTVLATRATAALCELLLPDSGHLQEKDAEF 139 Query: 118 ---------------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 I F A V G + R H I + Sbjct: 140 ANQHGFSRHQPALPLYTQADARLALQLFRPIEFGAWHAVTDG-IRVRYHRAGH-ILGAAS 197 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I I+ +GD DA++ D ++ +ST R + Sbjct: 198 IEIDWKGRTILFSGDIGRYGDAVMKDPEPPAR--------ADYVLVESTYGDRRHEQVDP 249 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI----------------------A 247 K + ++ ++ G V++ F+ V R++S++ Sbjct: 250 TKTLGDHVERCVERG-GTVVIPAFA--VGRVQSLLYHFSRLRAQGRLRDIPIFLDSPMAI 306 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEP 305 G + + + + P ++I+ A+G + G Sbjct: 307 NASGLMCDFMDEHRLARAECEAACSVAHYVREVEESKELTANPTPKVIISASGMATGGRV 366 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + + + + A+ G I I + V Sbjct: 367 LHHLKRFAPDGKNLILFSGFQAAGTRGAAMIGGARTI-KIHGEYIPVEAEVA-----NLT 420 Query: 366 HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKE 403 +S H ++L R + P+ + HGEP + Sbjct: 421 MLSAHADSDELMRWLGSLHEAPRHVYVTHGEPTGAQVLAK 460 >gi|149194632|ref|ZP_01871728.1| beta-lactamase-like protein [Caminibacter mediatlanticus TB-2] gi|149135376|gb|EDM23856.1| beta-lactamase-like protein [Caminibacter mediatlanticus TB-2] Length = 465 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 68/463 (14%), Positives = 135/463 (29%), Gaps = 91/463 (19%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + + I+IDCG+ ++ + + + + + A+ ITH H DH G + Sbjct: 20 HILDTGKSKILIDCGMFQGVNEHL-------NYAPLGFDPREIEALIITHGHLDHVGRIP 72 Query: 86 DLWSF-LHVPVYASPFAIGLLE------AKRVYE-------------------------- 112 L+ + V+A P + + AK E Sbjct: 73 LLYKYGFRGKVFAHPATFDIAKIVLLDSAKLQEEEYQTRYKKAQRRGKEKFVKKPLYTRD 132 Query: 113 ---RVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVG----NIVHTG 164 ++ K++ K + H I + + I NIV +G Sbjct: 133 EVKKIFKQMNKKYIDYNKKYKITKDIKATFKDAGH-ILGSSFVEIEFENFGIPKNIVFSG 191 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKN 223 D ++ IL E AL +ST R E ++ K Sbjct: 192 DLGNKNNDILPKP--------QKGEIADALFIESTYGDRNHKSFEESKVEFKKTIVETLL 243 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRK------------------IVLLGSS----L 261 + G V++ TF+ + R + I+ I +++ + + + L Sbjct: 244 SGGNVIIPTFA--IERAQQILCILKEMSIEGSLPKDAKVILDSPMANKVTAVYRKWNKLL 301 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI---VIATGSQGEPRSALAQLSRGEMR 318 ++ + D + +IA L L + R Sbjct: 302 RKNCQKYKHHPFEFPQLNLIKDVEESKKINNIIRGAVIIAGSGMCNGGRILHHL---KHR 358 Query: 319 NVKLAEKDTVI-FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 + + ++ G ++ G ++ + + V A+ S H +L Sbjct: 359 IWNPKNTILFVGYQAKGTLGRDIIDGAKFIKIFHEEIIVRAKIVTINGF-SAHADQKELL 417 Query: 378 RMYQWIRP-QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + + IHGE + K + V G Sbjct: 418 EWMSEFKKLDRIFLIHGEYDKQIVFKSVIKNFFNKKAHIVNLG 460 >gi|187735154|ref|YP_001877266.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425206|gb|ACD04485.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 259 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 22/161 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 + F LG G N + G +++D G S + D V PD Sbjct: 2 MQFCVLGSGS--GGNATIVRAG----ETVLLVDAGFSAARLRDKMKSAGVEPD------- 48 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH +H V VYA+ ++ K + + P F+ Sbjct: 49 --ELDAILLTHEHADHMKGVHQFTRKHAVRVYATRHTAMCVQEK------APEAPWAYFE 100 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G +G I H + + + ++ D Sbjct: 101 KGQSFRIGDIVITPFPTYHDAVDPVGFKFETERSSLGFISD 141 >gi|170594001|ref|XP_001901752.1| DNA ligase I [Brugia malayi] gi|158590696|gb|EDP29311.1| DNA ligase I, putative [Brugia malayi] Length = 608 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL----EAKRVYERVSKKIPCISF 123 + F+THAH DHYGA+ + W+ + +Y SP +L + + + + Sbjct: 23 IKYYFLTHAHSDHYGAIDNKWN--NGNIYCSPVTAHVLPIVTQRHKSKFGGIRSHIIHAL 80 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVI---RSPVGNIVHTGDWKLD-DDAILGDVTD 179 + FS+ + NH IP ++ + R G I+ TGD++ D Sbjct: 81 DLNVWHYMDGFSVMLLDANH-IPGSVMFLFEGDRISEGRILFTGDFRADIQLYKNVLTAS 139 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 + + + T S + + + +K VT V R Sbjct: 140 VLRERNLSTIYLDTTYINCTREEFPSRGASSAEMCNVLRKLFDGSKS---VTIMVPKVGR 196 Query: 240 IRSIIDIAEQIGRKIVLLG 258 + ++D+A + KI + Sbjct: 197 EQLLVDVAIEFKCKIWVDY 215 >gi|149907465|ref|ZP_01896212.1| putative RNAse with metallo-beta-lactamase-like domain [Moritella sp. PE36] gi|149809135|gb|EDM69064.1| putative RNAse with metallo-beta-lactamase-like domain [Moritella sp. PE36] Length = 474 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 132/415 (31%), Gaps = 63/415 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L G V + + Y + + ++IDCG+ F + G + + I Sbjct: 1 MRILHHGAVNGVTGSCHQL-YMNDYNS--VLIDCGL-FQGSEAAGKNN--KNQLSIDFNI 54 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------------EAKRV 110 + + A+ +TH H DH G + L + P+YA+ LL + K + Sbjct: 55 RTIKALIVTHCHIDHVGRIPYLLAAGFTGPIYATEATAALLPLVIEDALKVGVTRDKKLI 114 Query: 111 YERVS---KKIPCISFQAGDKVDVGAF---------------SIESVRVNHSIPETMALV 152 +S ++ + +Q ++V I H I + + Sbjct: 115 QACLSLLQNQLISVPYQKWQTIEVLKIPKEDIKPDEVCYQRQKIRFCPAGH-ILGSAYVE 173 Query: 153 IR------SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 I +V +GD +L L+ +ST + Sbjct: 174 IELSTDKPIRRHRVVFSGDLGASYSPLLSSPRSPYR--------ADTLIIESTYGDKRHE 225 Query: 207 CISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 +++ K + + + + G VL+ FS + R + ++ EQ +SL + + Sbjct: 226 HRNQRSQKLQAVIEHAVSDNGVVLIPAFS--IGRTQELLYEIEQ--FIHTAPDNSLWKHI 281 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN--VKLA 323 + +D + D L+ +E L + G L + + VK Sbjct: 282 EIIVDSPMAANFTSKYRDFK-ALWDKEALGKLKQGRHPLDFDQLYTIDSHQDHLTVVKYL 340 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + A G + G I N L + A+ G P + Sbjct: 341 SQRDKPAIVIAASGM-CSGGRIVNYLTQFLPDAKADVIFVGYQAQGTPGREIQRY 394 >gi|116621557|ref|YP_823713.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224719|gb|ABJ83428.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 269 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 15/149 (10%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I++D G+S + + + I + +++ AI +TH H DH L L Sbjct: 30 TENTRILVDAGLSMRE--------LRKRLALIGETLESIDAIIVTHEHSDHVSGLPVLAR 81 Query: 90 F--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 L +Y + + + + SFQAG +G ++S + H + Sbjct: 82 AKGLRAVIYMTRLTAPAI-----DWGETTPVRLESFQAGAAFQIGDIEVQSFGIPHDAID 136 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + + D ++I Sbjct: 137 PVGYCFEAEGVRVGIATDLGYVPESIKFH 165 >gi|312130193|ref|YP_003997533.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] gi|311906739|gb|ADQ17180.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] Length = 209 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 62/197 (31%), Gaps = 22/197 (11%) Query: 20 NMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + + S + I++D G + + + F+ N+ AI +THAH Sbjct: 13 NTYVL---TDPSGETIVVDPGCYTQAEKEQLK--------EFLK--PLNVKAILLTHAHL 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSKKIPCISFQ---AGDKVDVG 132 DH + L VPVY + +L E + + + + GD G Sbjct: 60 DHIFGVAYLKRHYDVPVYMHKLDLPILADFEMRCKMWGIPGAESFEAEKFLEEGDVFTFG 119 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 +E + V P + V I ++ + D D+L I + Sbjct: 120 QTQLEVLHVPGHAPGHIVFVSHENEMIIGGDCLFRRSIGRTDLPMGDHDTL--INSIKTK 177 Query: 193 ALMCDSTNAMREGTCIS 209 + G Sbjct: 178 LFSLPDHYTVYPGHMEP 194 >gi|171185767|ref|YP_001794686.1| beta-lactamase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934979|gb|ACB40240.1| beta-lactamase domain protein [Thermoproteus neutrophilus V24Sta] Length = 315 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 22/182 (12%) Query: 65 RKNLMAIFITHAHEDHYG--ALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ITH H DH AL PV A+ + + + + I+ Sbjct: 27 KGRVDFVLITHGHSDHISRYALRY-------PVVATRETLAAMSVRL----GAAPARRIT 75 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 AG V+V + + H I ++ ++ + TGD+ + TD Sbjct: 76 VAAGRVVEVDGVEVAVLEAGH-ILGSVMYLVEVDGLQALFTGDFNTVGTIL----TD--- 127 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A E + L+ ++T + + + D+++ G V + + + + Sbjct: 128 -AAEPVENVDVLVMEATYGDPAYVFPNRAEVYNELLDLVERHSGDGGVAIAAYPLGKAQE 186 Query: 243 II 244 + Sbjct: 187 VA 188 >gi|312868828|ref|ZP_07729017.1| metallo-beta-lactamase domain protein [Lactobacillus oris PB013-T2-3] gi|311095671|gb|EFQ53926.1| metallo-beta-lactamase domain protein [Lactobacillus oris PB013-T2-3] Length = 268 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 55/168 (32%), Gaps = 13/168 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + + I+ID G+ ++ + I + ++ AIF+TH H DH + L Sbjct: 24 ETDQHRILIDAGL-----SGKKIEGLMAK---IGRSLDDVEAIFVTHEHSDHCHGVGVLA 75 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 + VYA+ + K + F +G IES V+H E Sbjct: 76 RRYGMAVYANRGTWQAMANKV---GAIPEDQQFIFNPNSVQTLGDLDIESFAVSHDAAEP 132 Query: 149 MALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + D + D A D + + +L + Sbjct: 133 QFYQVHHDNKTFCILTDTGYVSDRVAGTIRDADAYLMECNHDTEMLRM 180 >gi|329117846|ref|ZP_08246563.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] gi|326908251|gb|EGE55165.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] Length = 283 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + ++ I++D G++ K + I ++ ++L AI ITH H DH + Sbjct: 33 SFYLETPKQKILVDAGLTGKKMTSLLAE--------IDRKPEDLDAILITHEHSDHIKGV 84 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L H+ +YA+ +++ + + ++ + I F + G IES V+H Sbjct: 85 GVLARKYHLDIYANQNTWKIIDDRNMIGKIDSEHKHI-FDRDKVMTFGDIDIESFGVSHD 143 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D + + + D Sbjct: 144 AHDPQFYRFMKDNKSFVMLTDTGYVSDRMSGIIENAD 180 >gi|20161430|dbj|BAB90354.1| DNA ligase-like [Oryza sativa Japonica Group] gi|21952820|dbj|BAC06236.1| DNA ligase-like [Oryza sativa Japonica Group] gi|125572866|gb|EAZ14381.1| hypothetical protein OsJ_04301 [Oryza sativa Japonica Group] Length = 698 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 107/330 (32%), Gaps = 37/330 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 F+THAH DH A P VYA+ + L + ++ + + G V Sbjct: 27 FLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLA---LRHFPRLERGEFVEMEVGKTV 83 Query: 130 DV----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 V GAFS+ + NH P + + G+I+HTGD +L D + + Sbjct: 84 VVDDPAGAFSVTAYDANH-CPGAVMFLFEGQFGSILHTGDCRLTPDCVHNLP--LKYIAK 140 Query: 186 IGNEGI---LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G E I + D T + S++ + + + V + Sbjct: 141 KGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWKHPHAPFVYLACDLLGHEEI 200 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY-PREQLIVIATGS 301 +I+++ G KI + R + +I + + + L A Sbjct: 201 LIEVSRTFGSKIYVDKR---RNSDCFRALSLIAPEIITEDPSCRFQILGFQNLYDKACTK 257 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 E R++L + + + V+ Sbjct: 258 IEEARASLQP------EPLFIRPSTQWYAHCAQS------------QKPSLTEAVLDGCG 299 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++L++ + ++PQ +++ Sbjct: 300 VWHICFSIHSSRDELEQALELLQPQWVIST 329 >gi|256751628|ref|ZP_05492503.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749437|gb|EEU62466.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 259 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 11/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I+ID G+S + +++ K+L AI ITH H+DH L ++P Sbjct: 24 ILIDAGLSGRTIEKALLNIGI--------NPKSLSAILITHEHKDHIIGAGVLSRRYNIP 75 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ +E K+ + + ++G I + +H E + + Sbjct: 76 IYANKATWDAMEKDIKEISEKNKLYFTTGEE---FEIGDVKIMPFKKSHDAVEPVGFSFK 132 Query: 155 SPVGNIVHTGDWKL 168 I D Sbjct: 133 CGDKKISIATDLGY 146 >gi|229163206|ref|ZP_04291161.1| Metallo-beta-lactamase [Bacillus cereus R309803] gi|228620269|gb|EEK77140.1| Metallo-beta-lactamase [Bacillus cereus R309803] Length = 209 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQNECIIFDPG-------HEGSKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 109 HIIDAEGALTIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 154 >gi|194767629|ref|XP_001965917.1| GF11594 [Drosophila ananassae] gi|190619760|gb|EDV35284.1| GF11594 [Drosophila ananassae] Length = 676 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 103/336 (30%), Gaps = 56/336 (16%) Query: 67 NLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ + F+TH H DH G L P+Y SP L+ + Sbjct: 311 DVAGVTHYFLTHYHADHYIG----LTKKFSHPLYMSPITARLVRLFIK----VDEKYIHE 362 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V V + ++ NH P + + S I+HTGD++ + + Sbjct: 363 IDVDETVMVDNVEVTAIEANH-CPGAVMFFFKLSSGECILHTGDFRACSEMESLPLF--- 418 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSS 236 N I L D+T + + ++ KN +L+ S Sbjct: 419 ----WNNTNIDLLYLDTTYLNKNYNFCHQSESVDRALHLVGAFIEKNPFKRILIVCGSYV 474 Query: 237 VSRIRSIIDIAEQIGRKIVLL-GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + + + + +AE K+ S + + D L + +I Sbjct: 475 IGKEKIWLALAEAFSLKVWTESSRS--------DAISCLGWDDLQVVLTDDPTKANLHVI 526 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + S +Q + + +S+ G Sbjct: 527 PMGKISYPSLVEYFSQFEDQYDMLLGIRP-SGWEKNSKPSFG------------------ 567 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + + S H +L+R ++++P+ +++ Sbjct: 568 --KKISTIGIEYSEHSSYKELERFVRFLKPKRVIST 601 >gi|119899618|ref|YP_934831.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Azoarcus sp. BH72] gi|119672031|emb|CAL95945.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Azoarcus sp. BH72] Length = 232 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 32/151 (21%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW--- 88 I+IDCG D+ + + K + IFITHAH DH + L Sbjct: 2 DDDILIDCGTGVG------------DLEY--GQLKRIDHIFITHAHLDHIAMIPLLIDSV 47 Query: 89 -SFLHVP--VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS---------- 135 VP VY S I +L + + I + + Sbjct: 48 GEARGVPVTVYGSAETIRILRSHIFNWLIWPDFSAIPDRHRPFLRFQVIKVGETVRLARG 107 Query: 136 -IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + +H++P +A + S G +V++GD Sbjct: 108 AVTVMPAHHTVP-AVAYCLDSGDGQLVYSGD 137 >gi|227529841|ref|ZP_03959890.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540] gi|227350325|gb|EEJ40616.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540] Length = 268 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 17/170 (10%) Query: 29 PSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 + I+ID G+S ++ + +D D + AIF+TH H DH + Sbjct: 24 ETDEHRILIDAGLSGKRIENLMAKIDRSLTD----------VDAIFVTHEHTDHCHGVGV 73 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 L + +YA+ + +K + +K D+G +ES V+H Sbjct: 74 LARRYGMDIYANQGTWDAMASKIGKIPLEQK---HIIAPNSVKDLGDIDVESFAVSHDAA 130 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 E + D + D D + + +L + Sbjct: 131 EPQFYQVHHNNKTFCIITDTGYVSDRVEGTIRNADAYLMECNHDTEMLRM 180 >gi|82702268|ref|YP_411834.1| Beta-lactamase-like [Nitrosospira multiformis ATCC 25196] gi|82410333|gb|ABB74442.1| Beta-lactamase-like protein [Nitrosospira multiformis ATCC 25196] Length = 257 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 40/261 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG + N + G +++DCG + + V + + E Sbjct: 3 MRFACLGSGSQ--GNALVVEAG----NTRLLLDCGFTLRE-------TVI-RLARLGLEP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +TH H DH + +PV+ + L + + I Sbjct: 49 DTIDAVVVTHEHSDHICGVARFARKFGIPVWLTHGT---LRSAGKAFGKLPGVNIIEG-- 103 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + +GA +E V H E V + + D I Sbjct: 104 YQRFSIGAIEVEPYPVPHDAEEPAQFVFGNGSLRLGVLTDTGCSTPHI-----------E 152 Query: 186 IGNEGILALMCDSTN-----AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 AL+ + + A + ++ + + A +L + +R+ Sbjct: 153 AVLNECDALVLECNHDARMLANSDYPESLKRRVGGRFGHLENAASASLLAKL---NCNRL 209 Query: 241 RSII--DIAEQIGRKIVLLGS 259 + +I ++++ ++ G Sbjct: 210 QHVIAAHLSQKNNTPPLVQGM 230 >gi|47567823|ref|ZP_00238531.1| hydroxyacylglutathione hydrolase [Bacillus cereus G9241] gi|47555500|gb|EAL13843.1| hydroxyacylglutathione hydrolase [Bacillus cereus G9241] Length = 209 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 109 HIIDAEGTLAIGSFNFEVFETPGHSPGSISYY--CKEASAVFSGDVLF 154 >gi|255009779|ref|ZP_05281905.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] gi|313147568|ref|ZP_07809761.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] gi|313136335|gb|EFR53695.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] Length = 246 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 26/163 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + + + ++++CG+SF + V D + + ITH H+ Sbjct: 12 GNCYVLE----NETEALILECGISFIE-----VKKAI-DF-----NLQKVAGCLITHEHK 56 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH A++++ VPVYAS I +AG +G F + Sbjct: 57 DHCKAINEVLK-TSVPVYASAGTI-------QTMNGQGYHEPHPLEAGKVYMIGRFKVLP 108 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 H E +I+ V + D + + Sbjct: 109 FHTKHDCAEPFGYLIQHEETGNVL---FATDTYYLPNRFQNLS 148 >gi|218189475|gb|EEC71902.1| hypothetical protein OsI_04671 [Oryza sativa Indica Group] Length = 642 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 108/330 (32%), Gaps = 37/330 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 F+THAH DH A P VYA+ + L + ++ + + G V Sbjct: 27 FLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLA---LRHFPRLERGEFVEMEVGKTV 83 Query: 130 DV----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 V GAFS+ + NH P + + G+I+HTGD +L D + + Sbjct: 84 VVDDPAGAFSVTAYDANH-CPGAVMFLFEGQFGSILHTGDCRLTPDCVQNLP--LKYIAK 140 Query: 186 IGNEGI---LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G E I + D T + S++ + + + V + Sbjct: 141 KGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWKHPHAPFVYLACDLLGHEEI 200 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY-PREQLIVIATGS 301 +I+++ G KI + R + +I + + + L A + Sbjct: 201 LIEVSRTFGSKIYVDKR---RNSDCFRALSLIAPEIITEDPSCRFQILGFQNLYDKACTN 257 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 E R++L + + + V+ Sbjct: 258 IEEARASLQP------EPLFIRPSTQWYAHCAQS------------QKPSLTEAVLDGCG 299 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++L++ + ++PQ +++ Sbjct: 300 VWHICFSIHSSRDELEQALELLQPQWVIST 329 >gi|260837252|ref|XP_002613619.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae] gi|229299005|gb|EEN69628.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae] Length = 302 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 103/323 (31%), Gaps = 54/323 (16%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W P+Y S LL K + + D+ Sbjct: 30 FLTHMHADHTSGLSPSWKH---PIYCSEVTAKLLICKFDITPALVRPLAVGESHILPLDE 86 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++ NH P + + + G+I +TGD++ ++ D + L Sbjct: 87 TGQETMTVTVFDANH-CPGAVMFLFQGYFGSIFYTGDFRYSP-----EMFDHEVLA--NR 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+T E S + I DI+ G +V SS+ Sbjct: 139 QSIDVLYLDNTYCSPECKFPSRTEATQMIKDIICRHPGHDIVLGVSSN------------ 186 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 +G++ +L+ ++ V + ++ +L F ++ V Sbjct: 187 ALGKEDMLVELAMTFQTWVVVTPQRLETLKLLELPNVFTDREDGRIWVTLK--------- 237 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 Q++R + I +S G + + V S Sbjct: 238 -YQITRKNIERWNQERPTIAIIASSLYAG--------LDGISHVHVVP----------YS 278 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H +L ++P+ ++ + Sbjct: 279 DHSSYRELHEFVSRLKPRSIIPV 301 >gi|311032222|ref|ZP_07710312.1| metallo-beta-lactamase family protein [Bacillus sp. m3-13] Length = 264 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + +ID G+S K I ++ ++L I +TH H DH L Sbjct: 17 IYVATEEHSFLIDAGLSGKKMQEL--------FNGIGRKIEDLSGILVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P+YA+ A + +F+ G I+S V+H Sbjct: 69 VLARKYKLPIYANEKTWM---AMDGLVGLIPTEQKFNFEIEQVKTFGGLDIQSFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M +V D + D + D + + +L + Sbjct: 126 AEPMFYSFHDGDKKVVIITDTGYVSDRMKGIISNADAYVFESNHDVQMLQMGHYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D+M + + + S Sbjct: 186 RILSDVGHVSNEDAALAMADVMGDKTKRIYLAHLSKD 222 >gi|194289307|ref|YP_002005214.1| hypothetical protein RALTA_A1183 [Cupriavidus taiwanensis LMG 19424] gi|193223142|emb|CAQ69147.1| conserved hypothetical protein; putative Metal-dependent hydrolase [Cupriavidus taiwanensis LMG 19424] Length = 262 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 30/240 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L ++ +++DCG G+ + + Sbjct: 2 MRFAFLGSGSE--GNSLLIESREDTTTTRVLLDCG--------FGIRETARRLERLGVTP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+ +TH H DH G+ + + + VY S L + R + A Sbjct: 52 DQLDAVLVTHEHGDHVGSAYAFAARHRLTVYTSHGTW-LATSHL---RGADVADVRVCCA 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 +G + V H E + V+ + D VT L Sbjct: 108 DHGFAIGGLQVLPYTVPHDAREPVQFVLSDGQARLG----VLTDAGMETPYVT--ARLA- 160 Query: 186 IGNEGILALMCDSTNA-----MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G+ AL+ + + ++ I + + +L ++R+ Sbjct: 161 ----GVDALVLECNHDREMLRNSVYPASLKRRIGGDFGHLANEVAASILAQVAHDRLNRV 216 >gi|170760795|ref|YP_001788906.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407784|gb|ACA56195.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 261 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---NRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWQAMKKNVGKIKEHN-------IEILDGKSVVLNDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|302392988|ref|YP_003828808.1| beta-lactamase domain protein [Acetohalobium arabaticum DSM 5501] gi|302205065|gb|ADL13743.1| beta-lactamase domain protein [Acetohalobium arabaticum DSM 5501] Length = 267 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L L G G ++ + + +K +++D G+S V + Sbjct: 1 MIKITLEVCSL-ASGSSGNSIYV-----ATDKKKVLVDAGLS--------GKRVSERLAE 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + L AI +TH H DH + L ++P+YA+ + + K Sbjct: 47 INVDGSELDAILVTHEHGDHIKGVGILSRRFNLPIYATEKTWAAAK----EDLGKIKPEY 102 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 I + + +G +ES + H + + +R+ + D Sbjct: 103 ICIINKEGLSLGDLELESFEIPHDAVDPVGFTLRNKNKKVSIATDIGY 150 >gi|110639794|ref|YP_680004.1| metallo-beta-lactamase superfamily protein [Cytophaga hutchinsonii ATCC 33406] gi|110282475|gb|ABG60661.1| metallo-beta-lactamase superfamily protein [Cytophaga hutchinsonii ATCC 33406] Length = 451 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 47/264 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G ++ +M L I+IDCG F +FP E + + Sbjct: 7 GAARKVTGSMYLLESLGYK----ILIDCGSDFSDRHKVLTGGLFPF------EASEIDLV 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-------------LEAKRVYERVSKK 117 +THAH DH G + L + ++ L E K S Sbjct: 57 ILTHAHVDHSGNIPALIRAGYRGQILSTAPTAELSELLFADSAYIQRAEKKIANSAPSDY 116 Query: 118 IPCISFQAGDKVDVGAF------SIESVRVNHSIPETMALVIRSPVG----NIVHTGDWK 167 + F ++ V H I ++ ++ I+ +GD Sbjct: 117 SYKPVDRFIPIAFNKDFELNERITVRLTPVGH-ILGAASVFVKVEEEGKTKTILFSGDVG 175 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT--CISEKGIKKNIYDIMKNAK 225 D+ +L D + + ++C++T R +E+ +K+ + + + Sbjct: 176 RDNYPLL---PDPEQ-----SPQADYVLCETTYGNRVHKETEPAEEIVKRIVTEACVDKP 227 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQ 249 G +++ FS + R +S++ + Sbjct: 228 GRLIIPAFS--LGRTQSLLYTLNK 249 >gi|314936334|ref|ZP_07843681.1| metallo-beta-lactamase family protein [Staphylococcus hominis subsp. hominis C80] gi|313654953|gb|EFS18698.1| metallo-beta-lactamase family protein [Staphylococcus hominis subsp. hominis C80] Length = 208 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 54/179 (30%), Gaps = 24/179 (13%) Query: 26 YGSPSSRKWIMID-CGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y S +++D G S D + + + K L AI +THAH DH GAL Sbjct: 16 YFIESDNSVLLVDPAGES---------DKI---FKQLNQINKPLKAILLTHAHFDHIGAL 63 Query: 85 HDLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFS 135 D+ S VPVY L K + A D + F Sbjct: 64 DDVLSKYDVPVYMHKEEFSFLTDPEKNGSSKFKQYGMPLTTSKAQPMALDEGNFTIDEFK 123 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + + L Sbjct: 124 FNVIHTPGHSPGSLTYVFDDFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKLFEL 180 >gi|257092295|ref|YP_003165936.1| beta-lactamase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044819|gb|ACV34007.1| beta-lactamase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 255 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 36/186 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G IG + S ++ID G L Sbjct: 1 MKVRV--LGCSGGIGGS--HRRTTSMLVDDDLLIDAGTGVADLSL--------------A 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 E + +F+TH+H DH +L L + VYA+ + ++ + Sbjct: 43 ELAVIDHVFLTHSHLDHIASLPLLVDSVSDLRDKPLTVYATAETLAIIGKHIFNWVIWPD 102 Query: 118 IPCISFQAG-----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I V +G +I ++ H++P + + S G++V TGD Sbjct: 103 FRVIPSPEEAVMRYRSIALGQSVRLGGRTITALPAEHTVP-AVGYQLDSGSGSLVFTGDT 161 Query: 167 KLDDDA 172 ++D Sbjct: 162 TINDAF 167 >gi|153811282|ref|ZP_01963950.1| hypothetical protein RUMOBE_01674 [Ruminococcus obeum ATCC 29174] gi|149832780|gb|EDM87864.1| hypothetical protein RUMOBE_01674 [Ruminococcus obeum ATCC 29174] Length = 539 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 66/506 (13%), Positives = 141/506 (27%), Gaps = 109/506 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + Y ++ K ++DCG+ PD + + Sbjct: 1 MKITFIGATHEVTGSC----YYLEAAGKKFLVDCGMEQG-----------PDYY---ENQ 42 Query: 66 K------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV-------- 110 +L + +THAH DH G L +++ P+YA+ L + Sbjct: 43 DIPVKGSDLDFVLLTHAHMDHSGNLPAIYAKGFQGPIYATQATCHLCDIMLRDSAHIQMF 102 Query: 111 -----------------------YERVSKKIPCISFQAGDKV-DVGAFSIESVRVNHSIP 146 + + + + S+ V H + Sbjct: 103 EAEWRNRKGRRQGKPEFVPAYTMEDAMGVIQNFVPCPYEKTIKPAEGISVRFVDAGHLLG 162 Query: 147 ETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + IV +GD + ++ D ++ +ST R Sbjct: 163 SASIEITIQEDGKEKKIVFSGDIGNLNQPLIKDPVYLH--------DADYVIMESTYGDR 214 Query: 204 EGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 + + + I G V++ +F+ V R + ++ QI + + G Sbjct: 215 SHGERPDYIAMLTEVIQHTFDRG-GSVVIPSFA--VGRTQEMLYFIRQIKEEGRVHGHDN 271 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNV 320 +V + + ++ + + E + ++ G L ++ + + + Sbjct: 272 FKVYVDSPLAN---EATTIFNEHIYDCFDEEAMALVKKGINPLMFPGLKTSITSDDSKAI 328 Query: 321 KLAEKDTVIFSSRAI----------------PGNEVAI--GHIKNRLVEQGVRVIAEDAE 362 E VI S+ + P N + L + E Sbjct: 329 NFDEDCKVIISASGMCDAGRIKHHLKHNLWNPNNTILFVGYQAIGTLGRALIEGATEVKL 388 Query: 363 CPVHV------------SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQE 408 V SGH N L + +P+ + HG+ +E Sbjct: 389 FGETVAVGAEIRQMPGISGHADVNGLMTWIKAFKEKPEKVFVTHGDDEVTEIFARRLQEE 448 Query: 409 GIACVPPVRNGKMLRLFPDPIEIIDE 434 +G + L + + Sbjct: 449 LGLDSMAPFSGTVYDLANNTCIYEAQ 474 >gi|167523435|ref|XP_001746054.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775325|gb|EDQ88949.1| predicted protein [Monosiga brevicollis MX1] Length = 893 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 116/387 (29%), Gaps = 64/387 (16%) Query: 54 VFPDITFIMK---ERKNLMA---IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 V P F++ ++K + A F++H H DHYG L+D W+ P+YASP L+ Sbjct: 9 VVPGTGFLVDCFRDKKKIAAGQKFFLSHYHADHYGGLNDKWAA--GPIYASPPTARLVID 66 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN-------I 160 + + + + + NH P L+ + Sbjct: 67 FLEVDPKW----IHELPFDETHTIDDVEVTLMDANH-CPGAAMLLFGVRNQHAPEQRMYH 121 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 +HTGD + + D +L I E L D+T A + T ++ + Sbjct: 122 LHTGDCRFHP-----RMLDHPTLQGIHIEN---LYLDTTYANPKYTFPPQEDTIEFCART 173 Query: 221 M----KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + + +G LV + S+ + + ++ E +G ++ + K + + Sbjct: 174 IAAELEAHRGRTLVLVATYSIGKEKILLRAHELVGARVEVTERKWKMLNHCLPIANLETI 233 Query: 277 DQLFLSDESFGLYPREQLIVI----------ATGSQGEPRSALAQLSRGE----MRNVKL 322 + ++ + L ++ R V Sbjct: 234 FTTEHLPAHVTTTQAASVRIVGWHELGNMAPGGWTFLPDYPKLHEMLDFYASRFDRIVAF 293 Query: 323 AEKDTVIFSSRAI------------------PGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 S+A+ E V + Sbjct: 294 YPTGWTYTLSQAVRERQAITASQSHAQTLAEASTEARAHLTARPAVLHAAETKNKVTVYT 353 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++L+ + IRP +V Sbjct: 354 VPYSEHSSFDELRALVSGIRPTNVVPT 380 >gi|49480959|ref|YP_038321.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196041608|ref|ZP_03108900.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|49332515|gb|AAT63161.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196027596|gb|EDX66211.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] Length = 209 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 109 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 154 >gi|313904363|ref|ZP_07837740.1| RNA-metabolising metallo-beta-lactamase [Eubacterium cellulosolvens 6] gi|313470699|gb|EFR66024.1| RNA-metabolising metallo-beta-lactamase [Eubacterium cellulosolvens 6] Length = 537 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 68/463 (14%), Positives = 139/463 (30%), Gaps = 103/463 (22%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + +G E+ + Y ++ K ++D G+ + +L P Sbjct: 1 MRLMFIGADHEVTGSC----YYLEAAGKRFLVDYGMEQGNNVYVNAELPCP--------A 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 ++ + +THAH DH G L L++ PVYA+ L + Sbjct: 49 SDIDFVLLTHAHIDHSGMLPKLYAMGFRGPVYATKATADLCDIMLRDSAHIQEFEADWRN 108 Query: 112 -----ERVSKKIPCISFQAGDKVD--------------VGAFSIESVRVNHSIPETMALV 152 +P + D V I + H + + ++ Sbjct: 109 RKGRRAGKPDFVPPYTMADADGVIKQIKGYPYEQIITVAEGIDIRFIDAGH-LLGSASIE 167 Query: 153 IRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTC 207 I IV +GD + ++ D + ++ +ST R G Sbjct: 168 IWLREAGKERKIVFSGDIGNVNQPLIR---DPQYIKE-----ADYVVMESTYGDRSHGER 219 Query: 208 ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 ++ + +I + G V++ +F+ V R + I+ QI + L + Sbjct: 220 VNCAQMLAHIIQETFDRGGNVVIPSFA--VGRTQEILYYIRQIKEQ------DLVKNYGN 271 Query: 268 AIDVG--IIKKDQLFLSDESFGLYPREQLI-VIATGSQGEPRSALAQLSR-GEMRNVKLA 323 + + + E+ ++ G S L + + +N+ Sbjct: 272 FTVCMDSPLANEATEIFKNHPEECYDEEATELLRKGINPIGFSGLKAMVDVKDSKNINED 331 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA-----------EDAECPVHV----- 367 ++ VI S+ + H+K+ L + ++ + H+ Sbjct: 332 DERKVIISASGMCDAGRVKHHLKHNLWRKECTILFVGYQAVGTPGRAIVDGAEHIRLFGD 391 Query: 368 --------------SGHPYPNDLKRMYQWIR--PQVLVAIHGE 394 SGH L + PQ + HGE Sbjct: 392 DVAVNASIRVLPGMSGHADNEGLMKWAAAFEKTPQKVFVCHGE 434 >gi|313639669|gb|EFS04460.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL S4-171] Length = 122 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 18/120 (15%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 E++ F L G G N L G + I++DCG+S + G+ Sbjct: 12 TEQIRFSILASGSSG----NATLVETG----DQKILVDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMSDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWQAMDNMIGEVSSDQKFQF 115 >gi|303241657|ref|ZP_07328155.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] gi|302590772|gb|EFL60522.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] Length = 263 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 15/149 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G I++D G+S G ++ +T I + + A+ ++H H Sbjct: 13 GNCLFVSDGKTK----ILVDSGLS-------GKRIIEALVT-IGENPSEISAVLVSHEHS 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +P+YA+ +E + F ++ ++G +++ Sbjct: 61 DHIRGAGILSRKFDIPIYANENTWNAME---QEIGPVNIKNKVCFDNCEEFEIGNIFVKA 117 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + H + + I D Sbjct: 118 FPIPHDASDPVGFNFFLNNKKITTATDIG 146 >gi|91790505|ref|YP_551457.1| cyclic-AMP phosphodiesterase [Polaromonas sp. JS666] gi|91699730|gb|ABE46559.1| cyclic-AMP phosphodiesterase [Polaromonas sp. JS666] Length = 263 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 59/241 (24%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGVDLVFPDITF 60 ++ LG G I + + +++D G D++ G+D Sbjct: 1 MKVRV--LGCSGAIARDCRTTSFLLDHD---LLVDAGTGVGDLTLDEMRGID-------- 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERV 114 + +TH+H DH AL + + ++A I L+A + Sbjct: 48 ---------HVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTI 98 Query: 115 SKKIPCISFQAGDKVDVGAFS-----------IESVRVNHSIPETMALVIRSPVGNIVHT 163 I A + IE + H++P + + + G V T Sbjct: 99 WPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVP-AVGYAVSAGKGCWVFT 157 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + + I + L+ ++ + R E+ + K + + Sbjct: 158 GDTER----------NPALWARINQLDVAMLVIETAFSNR------ERDLAKRSLHLAPH 201 Query: 224 A 224 A Sbjct: 202 A 202 >gi|39996942|ref|NP_952893.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|39983830|gb|AAR35220.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] Length = 475 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG+ + + S I+IDCG+ D G FI + + Sbjct: 7 GGIFGVTGSCHELVI---SDNAAILIDCGLLQGNDGAGG-----KRFPFIDFPLDRVKGL 58 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 +TH H DH G + L P++ S + LL Sbjct: 59 VLTHVHIDHCGRIPHLLGAGFQGPIWCSEASALLL 93 >gi|332827605|gb|EGK00347.1| hypothetical protein HMPREF9455_03300 [Dysgonomonas gadei ATCC BAA-286] Length = 274 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 15/172 (8%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G N G + I+ID G+ G+ V + Sbjct: 10 KYKFFSLG-SGSSG-NCYYLG----TKENGILIDAGI--------GIRNVTKSLREYGVA 55 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + + AI ITH H DH + ++PVYA+ ++ RV + + + + Sbjct: 56 FEKIKAILITHDHADHIKTVGCFGDKYNIPVYATETVHEGIQRNRVVQANLYQSKRVIEK 115 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + F+I + V H E + I +V D D I Sbjct: 116 EV-PFTITDFNITAFDVPHDSIENVGYHIEFEGQALVVVTDIGRITDKIRDY 166 >gi|304410854|ref|ZP_07392471.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS183] gi|307304975|ref|ZP_07584725.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica BA175] gi|304350751|gb|EFM15152.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica OS183] gi|306912377|gb|EFN42801.1| RNA-metabolising metallo-beta-lactamase [Shewanella baltica BA175] Length = 480 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 68/455 (14%), Positives = 137/455 (30%), Gaps = 93/455 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L + +++DCG+ D+L D D +++ Sbjct: 8 LGATEEVTGSCHLL----SVDHEHLLLDCGLIQGGKADELRNHDPFAFDP-------ESI 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKI 118 A+ ++HAH DH G L L P+Y L ERV+KK Sbjct: 57 SAVVLSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQTRDTERVNKKR 116 Query: 119 PCISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR- 154 + + + + I H I + + + Sbjct: 117 AKHDLEPLEPLFTVEDAEQAITQFVPLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWL 175 Query: 155 ---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE- 210 +V +GD IL + T D+ ++ +ST R ++ Sbjct: 176 GEGKSQKKVVFSGDLGRAGMPILRNPTLVDT--------ADLVLMESTYGNRFHRSWTDT 227 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVS 266 +K + ++G +L+ FS V R + ++ + ++ LG L ++ Sbjct: 228 LAELKDIFAKTVNESQGNILLPAFS--VGRAQELLYLFHLYAKE-WDLGRWKICLDSPMA 284 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 + + L D + + + + + + + + Sbjct: 285 IEATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFIQTTEESMALNEVHKGLIIIAGS 344 Query: 327 TVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV 367 + R E + + + + E + + +H Sbjct: 345 GMCNGGRIRSHLEHNLWRPECDVIICGYQALGTPGRALVDGVEELTIHGNSIKVAAKLHT 404 Query: 368 ----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +L R Y+ +P L+ +HGEP Sbjct: 405 VGGLSAHADQAELLRWYRHFEGQPP-LILVHGEPD 438 >gi|330502232|ref|YP_004379101.1| beta-lactamase domain-containing protein [Pseudomonas mendocina NK-01] gi|328916518|gb|AEB57349.1| beta-lactamase domain-containing protein [Pseudomonas mendocina NK-01] Length = 467 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 69/288 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP---KDDLPGVDLVFPDITFIM 62 L F+ G + ++ + L ++++CG+ ++D + + Sbjct: 4 LTFI--GAIQQVTGSCYLVE---SRDGARVLLECGMHQGRRQEEDQ--------NRSAFP 50 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------ 109 + +L A+ I+HAH DH G L L + P++A+ + LLE Sbjct: 51 FDPHSLDAVVISHAHLDHSGLLPRLVAEGYRGPIHATEASCELLELMLLDSAFLQEKDAE 110 Query: 110 VYERVSKKIPCISFQAGDKV--------------------DVGAFSIESVRVNHSIPETM 149 R + + + V + H I + Sbjct: 111 WENRWRARQGKPTIKPLYTVANAEQALSQRRAHAYGVQVEVAKGVQVTFHNAGH-ILGSA 169 Query: 150 ALVI----RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + ++V +GD ++ + L+ +ST R+ Sbjct: 170 IVEMRVEDHHLHRHLVFSGDLGNTCSPLMQAPAQLN--------QADVLLMESTYGDRDH 221 Query: 206 TCISEKGIKKNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQI 250 E + + DI++ A G VL+ +F+ V R + +I + Sbjct: 222 RASDET--LEELADILQQAHREGGNVLIPSFA--VGRTQDLIYYLGRF 265 >gi|196046331|ref|ZP_03113557.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|225866243|ref|YP_002751621.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|196022801|gb|EDX61482.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|225788102|gb|ACO28319.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] Length = 209 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A K+ +G+F+ E P +++ N V +GD Sbjct: 109 HIIDAEGKLAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 154 >gi|88858600|ref|ZP_01133241.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Pseudoalteromonas tunicata D2] gi|88818826|gb|EAR28640.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Pseudoalteromonas tunicata D2] Length = 460 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 62/445 (13%), Positives = 123/445 (27%), Gaps = 74/445 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIM 62 +L F LG G + + Y + K I++D G+ GV + + + Sbjct: 10 MQLRF--LGAAGTVTGS----KYLLNINNKTILVDSGL------YQGVKNYRERNWAKLP 57 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE--------------- 106 + + AI +THAH DH G L ++ ++ S L E Sbjct: 58 IDESQIDAIVLTHAHIDHSGYLPVIYKNGYRGAIFCSHGTFKLCEILLPDAGYLQEEDAK 117 Query: 107 ----AKRVYERVSKKIPCISFQAGDKVDVGAFSIESV-----------RVNHSIPETMAL 151 + ++ + + R I + Sbjct: 118 YANDNRFSKHHPAEPLYTVDDAKACLNLFTPVDFHQHTEIADGVFLTLRHAGHILGASTV 177 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 + + NI+ +GD D L+ +ST R I Sbjct: 178 ELGNQQDNIIFSGDLG--------RHDDIIMRAPEAIPACNTLVVESTYGDRRHHPIDSL 229 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRV 264 N + G L+ F+ V R + ++ + +++ + L + Sbjct: 230 EFLANAINATLKRGGIFLMPAFA--VGRAQLMLHLIQELKQAALIPNIPVYLNSPMAIKA 287 Query: 265 VSVAIDVGIIKKDQLF----LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE---M 317 SV K + D + + EQ ++ + + + ++ G Sbjct: 288 TSVYNHFNKEHKLTAEQCKAIDDGTEYVKTMEQSTLLISKVMPAIIISASGMATGGRVLH 347 Query: 318 RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV----HVSGHPYP 373 L D + + N + + + + S H Sbjct: 348 HLKNLLPNDKNTIAFLGFQAAGTRGEALVNGATRIKLHGEYVPVKAEILALDNFSAHGDY 407 Query: 374 NDLKRMYQWIR--PQVLVAIHGEPL 396 D+ + P+ + HGEP Sbjct: 408 QDIIDWLKQAEQLPKKIFITHGEPT 432 >gi|324991494|gb|EGC23427.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK353] Length = 266 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------IDRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ + F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANEATW---KTMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|304316094|ref|YP_003851239.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777596|gb|ADL68155.1| beta-lactamase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 622 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 33/219 (15%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G + Y I++DCG++ L + D + + K++ + +TH H Sbjct: 225 GGSTGGSSYLITYDDVNILLDCGINLKDGRLY-----YNDFKKLGLDIKDIDLLVVTHCH 279 Query: 78 EDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE----------------RVSKKIPC 120 DH G + +L L+ P+ S +L + Sbjct: 280 LDHCGGIVNLIKNGLNCPIIMSYETKYILNGFFSKNSNMQDLNINVEDYKLLNIINDKTL 339 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVT 178 + + S+ + H I + I ++ +TGD+ + + + + Sbjct: 340 TDYCYDAVIKDKKVSLNLIPSGH-ILGACGVYIDIDGFSVFYTGDFTVKDVETNVGLCIP 398 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 D L+ ++T + +K I+ + Sbjct: 399 D--------GMNADVLITEATFGYTSSFSVYDKKIQDQL 429 >gi|118443365|ref|YP_878383.1| metallo-beta-lactamase family protein [Clostridium novyi NT] gi|118133821|gb|ABK60865.1| metallo-beta-lactamase family protein, putative [Clostridium novyi NT] Length = 512 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 68/465 (14%), Positives = 132/465 (28%), Gaps = 100/465 (21%) Query: 25 GYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + + K I++DCG+ + + G D D K + + ++HAH DH G Sbjct: 16 CHIMKFNDKTILLDCGLFQGKDEKVRGNDEFPFDP-------KKIDYVILSHAHIDHSGR 68 Query: 84 LHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----------------------- 119 + L+ V + L ++ Sbjct: 69 IPLLYKKGFKGEVICTRATKQLCSIMLPDSGYIQETETEWKNRKRIRQGLDTIEPLYTAK 128 Query: 120 --------CISFQAGDKVD-VGAFSIESVRVNH----SIPETMALVIRSPVGNIVHTGDW 166 + + ++ F I H SI E IV+TGD Sbjct: 129 IAELSMYLFRDYDYDEIIEVFDGFKIRFREAGHLLGSSIVEMYIKEDYEDEVKIVYTGDL 188 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGIKKNIYDIMKNA 224 + I+ D + ++ ++T R S K + I D + Sbjct: 189 GNTNKPIIRDPSYI--------TYADYIIMETTYGDRVHGDMDWSFKELVNIITDTFERG 240 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 G V++ +FS V R + ++ + + + V I V E Sbjct: 241 -GNVIIPSFS--VGRTQEVLYALSKYVKN--------NILKDVTIFVDSPLAANTSKIYE 289 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSR--GEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 Y ++ + + + E + + + +I S+ + Sbjct: 290 ECSDYHDSEMKSLVRTGLNPLNFKGVKYTNTPQESIQINKFKGNAIIISASGMCEAGRIK 349 Query: 343 GHIKNRLVEQGVRVIAEDAECP------------------------------VHVSGHPY 372 H+K+ L + V+ + +SGH Sbjct: 350 HHLKHNLWRKECSVVFVGYQAEGTLGRAILDGNKKVNLFGEPIAVNAKIYNLEGLSGHAD 409 Query: 373 PNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPP 415 N L +RP+ ++ +HG+ + KEL +G Sbjct: 410 RNGLVDWIDKLMVRPKEILLVHGDTKSQQSFKELLDSKGFKSRIM 454 >gi|332142651|ref|YP_004428389.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552673|gb|AEA99391.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Alteromonas macleodii str. 'Deep ecotype'] Length = 471 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 65/480 (13%), Positives = 136/480 (28%), Gaps = 91/480 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG V + +M L + +++DCG+ D + + + + A Sbjct: 7 LGAVEGVTGSMHLL----KTEHSTLLLDCGL-----YQGRRDEEAKNHEPLPIDVSQVDA 57 Query: 71 IFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVY------------------ 111 + ++HAH DH G L L + P+Y + + L+E Sbjct: 58 VILSHAHLDHSGRLPILLREGYCGPIYMTRPTVELIEVLLKDAASLQERDAEWENKRRQR 117 Query: 112 ---------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 + V K+ + K+ I H I + + I Sbjct: 118 SGKPLIEPLYRQEEVDGVMKQCKSTRYHTKRKIT-QDVEINFADAGH-ILGSAIVEIFIT 175 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 +V +GD A+L D D + ++ +ST R + E Sbjct: 176 ENGQSKKLVFSGDLGNSQAALLR---DPDIVTE-----ADVVLLESTYGDRNHRSMEETL 227 Query: 212 -GIKKNIYDIMKNAKGCVL----VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 ++ I + +N ++ V + R+ + + +K+ L V Sbjct: 228 DEFEQVILEASENGGNILIPSFAVGRTQEIIFRLGELYQQGKLTHQKVYLDSPMAIAVTE 287 Query: 267 VAIDVG--IIKKDQLFLSDESFGLYPREQ-----LIVIATGSQGEPRSALAQ-------- 311 + ++D + + + + Q L +++ + E AL + Sbjct: 288 IYHRYQDVYNEEDFDAIEESAERAHSHNQSLHSLLPILSYTTSTEESIALNKVVSGAIII 347 Query: 312 ----LSRGEMRNVKLAEKDTVIFSSRAIPG---NEVAIGHIKNRLVEQGVRVIAEDAECP 364 + G L + S G + + + Sbjct: 348 AGSGMCNGGRIRHHLKQNLWRKQSHVIFVGFQAMGTPGRKMVDGATRIKMAGEDIAIRAQ 407 Query: 365 VHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRN 418 +H S H + L P++ + E + + A +P + Sbjct: 408 IHTLGGFSAHASQSQLINWLSHFEKTPKIYLVHGEEGAKQTLCSAIKEKGWEATIPHLNE 467 >gi|94499402|ref|ZP_01305939.1| metallo-beta-lactamase family protein [Oceanobacter sp. RED65] gi|94428156|gb|EAT13129.1| metallo-beta-lactamase family protein [Oceanobacter sp. RED65] Length = 479 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 68/481 (14%), Positives = 147/481 (30%), Gaps = 81/481 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV---FPDITF---IMKER 65 G V + + Y K ++IDCG+ F D+ +L PD T + + Sbjct: 6 GAVSGVTGSCHELRYTHRGQEKGVLIDCGL-FQGDEALNAELQNGGRPDKTQEQLLSENI 64 Query: 66 ----KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ A+ +TH H DH G + L + P+Y + + LL Sbjct: 65 PFPIDHIAALVVTHVHIDHVGRIPYLIAKGFDAPIYCTVASAHLLPLVLEDALKVGFTRN 124 Query: 121 ISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNI---VHTGDWKLDDDAILGD 176 + + + I E++++ + + T + K + Sbjct: 125 QALIDMFLSKIKQQIRPLAYNQIQHIDESLSIKLSPAGHILGSAYVTCELKS--SSPPRR 182 Query: 177 VTDKDSLCAIGNEG------------------ILALMCDSTNAMREG--TCISEKGIKKN 216 T+ I G L+ +ST + ++ ++K Sbjct: 183 GTNPKETKTIIFSGDLGASQSPIIRSFQSPEACDELVLESTYGDKNHEDRVTRQQRLQKI 242 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIID-----------IAEQIGRKIVLLGSSLKRVV 265 + +++ G VL+ FS + R + ++ ++ +++ + Sbjct: 243 LERALEDG-GTVLIPAFS--IGRTQELLYEIEDILHNNERNSKHSKLNVMVDSPLAAQFT 299 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK---- 321 ++ + D+ + G +P + S E + L R + Sbjct: 300 QSYRELKHLWDDEAQAKLKQ-GRHPLNFDELTTIESHKEHLETIDYLVRSRKPAIVIAAS 358 Query: 322 -LAEKDTVIFSSRAIPGNEVA------------IGHIKNRLVEQGVRV----IAEDAECP 364 + ++ +A+ G IG + + +G V + Sbjct: 359 GMCNGGRIMNYLKAMLGENRNDLLFVGYQASGTIGRLIQKYGPKGGYVDIDGKRIIIKAN 418 Query: 365 VH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGE-PLHLVAHKELALQEGIACVPPVR 417 +H S H +DLK + + +P+ + IHG+ +L V Sbjct: 419 IHTISGYSAHADQSDLKFFVRGMKQKPKKIRLIHGDGSAKRELRAQLNHDFPDIDVIIPE 478 Query: 418 N 418 Sbjct: 479 K 479 >gi|305663149|ref|YP_003859437.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] gi|304377718|gb|ADM27557.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] Length = 433 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 73/420 (17%), Positives = 149/420 (35%), Gaps = 66/420 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSF--------------PKDDLPGVDLVFPDITFIMKER 65 N L + I+ D G+ F ++L + + P + Sbjct: 26 NCVLV----KDRDRKIVFDNGIRFQVLRKYYRGRIQPLGINELRSIGAIPP-----LNIF 76 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-------KKI 118 +++ AI+I+H H DH G L L V VY +I +LE + R S Sbjct: 77 EDIDAIYISHFHLDHLGLLGALPP--GVKVYV--PSIDILEVIEDWYRRSSTWLAEIPHR 132 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + + + + V+HS + A + + ++GD ++D T Sbjct: 133 LNIKIEEFSAYHMDEHGVIPIPVSHSAYPSYAFLYEGYSKTLFYSGDLRVDSPLRSRIDT 192 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + AI + + + ++TN T I + + + I+ V+++ Sbjct: 193 LSNIERAIDSMNLDIALLEATNIGGIETPIGSEEFRNIMNRILME-NILVIISIDPLDYE 251 Query: 239 RIRSIIDIAEQIGRKIVLLGSSLKRV-----------------VSVAIDVGIIKKDQLFL 281 +I ++A GR I + + V +++AI++ L Sbjct: 252 LFTAISELALLSGRTITIASPRIIDVLPKWLKTSNTNNIDLSRIAIAIELEKPTTVPLQY 311 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN--- 338 ++ + ++ EP S L ++ R + ++ + + P Sbjct: 312 VGLKQDVFRTPENFLLI----QEPVSFL-EMLRQMRLWGEELPRNAIAILTTPEPLETEL 366 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHL 398 EV + L G+++ SGH YP++L+ + ++P+ L+ IH + L Sbjct: 367 EVEEKTLITWLYTLGIQI------YRARFSGHYYPHELRNIVDILKPKKLIPIHTKHPRL 420 >gi|282850509|ref|ZP_06259888.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] gi|282580002|gb|EFB85406.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] Length = 211 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++LV + PLG + G N + G + + +ID ++ Sbjct: 1 MSEQQLVLMRMPLGPL---GTNCYVI--GDKAIGEAFIIDP----ATAEVL--------- 42 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE--- 112 + K A+ +TH H DH G + ++ + HVPVY + L E Sbjct: 43 DALKKHDLKPKAVVLTHGHGDHIGGIQEIVNTYHVPVYIHKGDVPYLSDPELNLSAYSNP 102 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + K I + GD + G +E + P + + Sbjct: 103 TPIKVKAEIIEVKQGDHITCGDIDLEVLETPGHTPGGVCYYME 145 >gi|146339725|ref|YP_001204773.1| putative metallo-beta-lactamase family protein [Bradyrhizobium sp. ORS278] gi|146192531|emb|CAL76536.1| Conserved hypothetical protein; Putative Metallo-beta-lactamase family protein [Bradyrhizobium sp. ORS278] Length = 530 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 12/114 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L F G + + L + + ++IDCG+ F +L + D F Sbjct: 4 TLRFC--GAAHTVTGSCYLLR----TDQGQVLIDCGL-FQGQKTLK-ELNYGDFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK 117 + A+ +THAH DH G L L ++A+ I L ++ Sbjct: 53 PAEIDAVLLTHAHIDHSGLLPKLVRLGFDGRIFATRGTIDLCSWMLPDAGNIQE 106 >gi|260591612|ref|ZP_05857070.1| lipoate-protein ligase B [Prevotella veroralis F0319] gi|260536412|gb|EEX19029.1| lipoate-protein ligase B [Prevotella veroralis F0319] Length = 260 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 71/241 (29%), Gaps = 44/241 (18%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 + I+ID G PD + + + + + ITH H DH G + D Sbjct: 48 ETENTRIIIDSG---------------PDFRQQMLPQPFRKIDGLLITHIHYDHVGGIDD 92 Query: 87 LWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIE 137 + + + VYA+ L K+ + Q +G F + Sbjct: 93 VRPYCQLGDIDVYANEDTCAGLRHNFPYCFTEHLYPGVPKLELHAIQPHSHFRIGDFDVV 152 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + V H + +G + + D D+ + EG+ L+ + Sbjct: 153 PINVMH----GKLPIFAYRIGKLAYITD---------MKTIDESEFPYL--EGVETLVVN 197 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 RE S + I + I + +T + + + G Sbjct: 198 GLRWTREHH--SHQLIPEAIEFSKRICAKQTYLTHLTHQIG-LHEEAQHYLPNGFFFAYD 254 Query: 258 G 258 G Sbjct: 255 G 255 >gi|13324644|gb|AAK18826.1|AF327739_3 YycJ-like protein [Streptococcus thermophilus] Length = 243 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 26 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 77 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F G + G IES V+H Sbjct: 78 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHD 136 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + V D + D A L + D Sbjct: 137 AIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENAD 173 >gi|261367345|ref|ZP_05980228.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282570105|gb|EFB75640.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 245 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 I +TH H DH L VPVYA + +LE++ + + I+ G + Sbjct: 34 GILVTHEHSDHVAGLDTFLKKYPVPVYARADTLEVLESR---GTLPPAVEGIAVDGGQTM 90 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 DVG F + + +H +P +I + D Sbjct: 91 DVGHFRVTAFPTSHDVPCCGYRIITPDQHRMAIATD 126 >gi|217969706|ref|YP_002354940.1| RNA-metabolising metallo-beta-lactamase [Thauera sp. MZ1T] gi|217507033|gb|ACK54044.1| RNA-metabolising metallo-beta-lactamase [Thauera sp. MZ1T] Length = 469 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 64/454 (14%), Positives = 126/454 (27%), Gaps = 90/454 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG GE+ + + R ++DCG+ F G + + + E +++ Sbjct: 6 LGAAGEVTGSCLRVDH----ERGAFLVDCGL-FQG----GREADRKNRDALDFELRDIDF 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVYERVSKKI- 118 + +THAH DH G L L + ++A+ + L ++ K + Sbjct: 57 VLLTHAHLDHSGLLPRLVALGYRGRIFATTATVDLLGVMLMDSAHIQEKEAEWALRDTRS 116 Query: 119 -----------------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIR 154 + D ++ G H I + L I Sbjct: 117 RKMARRAEVAPLYTVEQARTSLGRFVPTDYDDWIEPGPGVRCRFRDAGH-ILGSAILEID 175 Query: 155 SPVGNIVHTGDWKLDDDAILGDVT---DKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 HT D D + L +ST R + Sbjct: 176 VGERG--HTRRLVASGDIGQPMRPVLRDPVRIAR-----ADYLCVESTYGNRAHRSFAAT 228 Query: 212 --GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID---IAEQIGRKI---VLLGSSLKR 263 + + ++ G V++ F+ V R + ++ + GR V++ S + Sbjct: 229 CDELALALRRTLEVDGGNVIIPAFA--VGRTQEVLFVLADLVRAGRIARLDVVVDSPMAS 286 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------SAL 309 V+ D + ++ + V E + S + Sbjct: 287 AVTALTVRHTALWDDETRALYAWAEANSGRFRVRFVQDVEESKALNAVPGGLVVISASGM 346 Query: 310 AQLSRGEM--RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 R + R+ + V+ + G + + + + +H Sbjct: 347 CDAGRIKHHLRHNLGRRECAVVIAGFQAAG--TLGRRLVDGAHQVTLFGERIPVRARIHT 404 Query: 368 ----SGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 S H L + P+ HGEP Sbjct: 405 IGGLSAHADQPALLDWLRGFGEAPRRTFVAHGEP 438 >gi|168183646|ref|ZP_02618310.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237797027|ref|YP_002864579.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182673226|gb|EDT85187.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229262979|gb|ACQ54012.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 261 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 S + I+ID G+S ++L I + ++ IF+TH H DH + Sbjct: 14 SIFISSEKSKILIDAGLSGKS-----IELAL---NRIKESPSSINGIFVTHEHIDHIKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 L +P+YA+ ++ K I G V + I + Sbjct: 66 GVLSRKYDIPIYANAKTWHAMKKSVGKIKEHN-------IEILDGKSVVLNDMEINPFAI 118 Query: 142 NHSIPETMALVI 153 +H I Sbjct: 119 SHDAASPFGYTI 130 >gi|24379905|ref|NP_721860.1| hypothetical protein SMU.1515 [Streptococcus mutans UA159] gi|24377884|gb|AAN59166.1|AE014984_1 conserved hypothetical protein CovX (VicX) [Streptococcus mutans UA159] Length = 267 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 13/157 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I+ID G+S K + I ++ ++ AI +TH H+DH + Sbjct: 19 SFYLETPQKRILIDAGLSGKKISQLMAE--------IDRKVDDVDAILVTHEHKDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + VYA+ ++ F G + G IES V+H Sbjct: 71 GVLARKYGLDVYANAATWQAMDGMI---GKIDVSQKHIFDLGKTITFGDIDIESFGVSHD 127 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + + V D + D A L + D Sbjct: 128 AAQPQFYRLMKDGKSFVILTDTGYVSDRMADLIENAD 164 >gi|157150207|ref|YP_001450080.1| zinc-dependent hydrolase [Streptococcus gordonii str. Challis substr. CH1] gi|262282635|ref|ZP_06060403.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] gi|157075001|gb|ABV09684.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus gordonii str. Challis substr. CH1] gi|262261926|gb|EEY80624.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] Length = 267 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 23/183 (12%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M E + L G G N + +++K I++D G+S K + Sbjct: 1 MTKEGFKYSILASGSSG----NC----FYLETAQKKILVDAGLSGKKITSL--------L 44 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + I ++ ++L AI +TH H+DH + L ++ +YA+ +++ +S+K Sbjct: 45 SEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLDIYANEDTWKAMDSALGKIDISQK- 103 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 F+ G + G IES V+H + V D + D A + + Sbjct: 104 --HIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVVE 161 Query: 177 VTD 179 D Sbjct: 162 NAD 164 >gi|225447705|ref|XP_002272846.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081253|emb|CBI17997.3| unnamed protein product [Vitis vinifera] Length = 435 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 104/327 (31%), Gaps = 20/327 (6%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DH L W P++ S L K +S V Sbjct: 19 FLTHLHSDHTQCLSSSW--TKGPLFCSRLTAKLFPFKFPNFNLSLLRILEIGSWHSVSLV 76 Query: 132 GAFSIESVRV------NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 S V H P + + R G ++ TGD++ + + L A Sbjct: 77 SPSSGSETTVDVMAIDAHHCPGAVMYLFRGDFGCMLFTGDFRWEATNERAKIGRTMLLHA 136 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 + + + L D+T + S + + + DI+ + ++ + + + ++ Sbjct: 137 LEGDRVNILYLDNTYCNPSFSFPSREAAAQQVVDIIASHPKHDIIIGIDT-LGKEDLLLY 195 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 I+ + KI + L+ + +G S PR + Sbjct: 196 ISRSLKVKIWVWPERLQTM----HLLGFHDIFTTKTSLTRIRAVPRYSFSINTLEGLNTV 251 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIP---GNEVAI----GHIKNRLVEQGVRVIA 358 R + + G VK +E + +I GN+ I N+ + V Sbjct: 252 RPTIGIMPSGLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPRAEINKKGKLRSVVRF 311 Query: 359 EDAECPVHVSGHPYPNDLKRMYQWIRP 385 V S H +++ + ++P Sbjct: 312 HQYIYSVPYSEHSCFPEIEDFIKLVQP 338 >gi|255026052|ref|ZP_05298038.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL J2-003] Length = 119 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 18/120 (15%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ +L AI ITH H DH L L +P+YA+ ++ +K Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQF 115 >gi|218291250|ref|ZP_03495234.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218238852|gb|EED06063.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 268 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 17/168 (10%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 G G ++ L S I++D G+S G L +E ++L A+ I Sbjct: 8 SGSNGNSLYL-----ESGDTRILLDAGLS-------GRQLETRLRAQCERELRDLTAVLI 55 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H+DH L L P+Y + L AK R+ + + +AG+ +VG Sbjct: 56 THEHDDHVKGLVQLAKKSQAPLYMTEGTYAGLPAK---ARLDEPDRVVHIRAGEPFEVGG 112 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 I V+H E +A + G++ D + D L D Sbjct: 113 VRITPFAVSHDAEEPVAFRFDTVEGSLAVVTDLGYVSDRQRELLRGCD 160 >gi|301055754|ref|YP_003793965.1| metallo-beta-lactamase family protein [Bacillus anthracis CI] gi|300377923|gb|ADK06827.1| metallo-beta-lactamase family protein [Bacillus cereus biovar anthracis str. CI] Length = 209 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A K+ +G+F+ E P +++ + V +GD Sbjct: 109 HIIDAEGKLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 154 >gi|269798271|ref|YP_003312171.1| beta-lactamase [Veillonella parvula DSM 2008] gi|294792132|ref|ZP_06757280.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] gi|269094900|gb|ACZ24891.1| beta-lactamase domain protein [Veillonella parvula DSM 2008] gi|294457362|gb|EFG25724.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] Length = 211 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++LV + PLG + G N + G + + +ID ++ Sbjct: 1 MSEQQLVLMRMPLGPL---GTNCYVI--GDKAIGEAFIIDP----ATAEVL--------- 42 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE--- 112 + K A+ +TH H DH G + ++ + HVPVY + L E Sbjct: 43 DALKKHDLKPKAVVLTHGHGDHIGGIQEIVNTYHVPVYIHKGDVPYLSDPELNLSAYSNP 102 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + K I + GD + G +E + P + + Sbjct: 103 TPIMVKAEIIEVKQGDHITCGDIDLEVLETPGHTPGGVCYYME 145 >gi|290580115|ref|YP_003484507.1| hypothetical protein SmuNN2025_0589 [Streptococcus mutans NN2025] gi|254997014|dbj|BAH87615.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 267 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 13/157 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I+ID G+S K + I ++ ++ AI +TH H+DH + Sbjct: 19 SFYLETPQKRILIDAGLSGKKISQLMAE--------IDRKVDDVDAILVTHEHKDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + VYA+ ++ F G + G IES V+H Sbjct: 71 GVLARKYGLDVYANAATWQAMDGMI---GKIDVSQKHIFDLGKTITFGDIDIESFGVSHD 127 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + + V D + D A L + D Sbjct: 128 AAQPQFYRLMKDGKSFVILTDTGYVSDRMADLIENAD 164 >gi|254239349|ref|ZP_04932672.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126171280|gb|EAZ56791.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 252 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 22/163 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPAELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G ++ + ++ V V+H E V+ D + Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTDLGM 141 >gi|220929181|ref|YP_002506090.1| RNA-metabolising metallo-beta-lactamase [Clostridium cellulolyticum H10] gi|219999509|gb|ACL76110.1| RNA-metabolising metallo-beta-lactamase [Clostridium cellulolyticum H10] Length = 543 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 83/285 (29%), Gaps = 60/285 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L + ++DCG F + V + Sbjct: 1 MNISFLGAAKTVTGSCFLVE----TKDTKFLVDCG-MFQGK----ANEVLLNTEPFSFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERV---------- 114 +L + +THAH DH G + L+ +YA+ + L Sbjct: 52 GDLDFMLLTHAHIDHSGRIPKLYMDGFKGTIYATKPTVQLCGIMLPDSGHIQEMENEWTN 111 Query: 115 ---------SKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALV 152 K +A D + + + H I + + Sbjct: 112 RKRQRAGQSPIKPLYTIKEATDCLSLFKGVAYDEVISVSQDVRVRFNDAGH-ILGSAIVE 170 Query: 153 IRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 I N IV +GD IL D + L+ +ST R T Sbjct: 171 IWIRENNQETKIVFSGDIGNKGMPILR---DPSIIGD-----TDYLIVESTYGDRLHTLK 222 Query: 209 SEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI 250 E + +I+ G V++ +F+ V R + +I + Sbjct: 223 KETDKIEKFINIISETISKGGNVVIPSFA--VGRTQELIYDLNKY 265 >gi|107100453|ref|ZP_01364371.1| hypothetical protein PaerPA_01001478 [Pseudomonas aeruginosa PACS2] gi|254245285|ref|ZP_04938607.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126198663|gb|EAZ62726.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 252 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 22/163 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPAELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G ++ + ++ V V+H E V+ D + Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTDLGM 141 >gi|324994825|gb|EGC26738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK678] gi|325687266|gb|EGD29288.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK72] Length = 266 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 23/176 (13%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKER 65 L G G N + + +K I++D G+S L G I ++ Sbjct: 8 SILASGSSG----NC----FYLETDQKRILVDAGLSGKKITSLLGE---------ICRKP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI +TH H+DH + L H+ +YA+ +A F+ Sbjct: 51 EDLDAILVTHEHKDHIHGVGVLARKYHLDIYANESTW---KAMEKDLGKLDASQKHIFEL 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G +ES V+H + V D + D A + + D Sbjct: 108 GKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIENAD 163 >gi|42783387|ref|NP_980634.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206977971|ref|ZP_03238857.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217961752|ref|YP_002340322.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|222097706|ref|YP_002531763.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|42739315|gb|AAS43242.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206743771|gb|EDZ55192.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217067370|gb|ACJ81620.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|221241765|gb|ACM14475.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|324328167|gb|ADY23427.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 209 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---TNEQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 109 HIIDAEGALAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 154 >gi|258648432|ref|ZP_05735901.1| metallo-beta-lactamase family protein [Prevotella tannerae ATCC 51259] gi|260851182|gb|EEX71051.1| metallo-beta-lactamase family protein [Prevotella tannerae ATCC 51259] Length = 261 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 14/160 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F+ G G G N Y ++ID G+ + T+ Sbjct: 1 MKFISFG-SGSSG-NC----YYLLEDGIGLIIDAGIGIRSFKKYFREY---GFTYPT--- 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH A+ L ++ V+A+ + + + C ++ Sbjct: 49 --LKAILVTHDHTDHVKAVGALSGEYNLEVFATEEVHKGILNNYYAHKKVRPELCRTYLP 106 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 GD +G F I + V H I + N D Sbjct: 107 GDDWSIGPFHITTFTVPHDASHNCGYFIETATTNFCFITD 146 >gi|94986728|ref|YP_594661.1| RNA processing exonuclease [Lawsonia intracellularis PHE/MN1-00] gi|94730977|emb|CAJ54340.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Lawsonia intracellularis PHE/MN1-00] Length = 533 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 66/504 (13%), Positives = 133/504 (26%), Gaps = 77/504 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +DCG F + + + + Sbjct: 1 MKITFLGAAKTVTGSCYLIEACGI----MFTVDCG-MFQGNSI----IEKRNFEIQHYHA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 K L I +THAH DH G L + H +Y + L ++ ++ Sbjct: 52 KELQFILLTHAHIDHSGLLPKIVKEGFHGRIYCTAPTKDLATLMLEDSAHINEMEAQ-WK 110 Query: 125 AGDKVDVGAFSIE----------------SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G E V+++ I+ + H Sbjct: 111 NKKYARHGKIEKEVLPLYTVEEAQNVSPLFTPVSYNTMFEPHPGIQVTYHDAGHILGAAF 170 Query: 169 DDDAILGD-------------VTDKDSLCAIG-NEGILALMCDSTNAMREGTCISEKGIK 214 + I + TD + L +ST R I + Sbjct: 171 LELVIKEEGKEVRLVFSGDLGRTDSLLMHEPMTPPQADFLFIESTYGDRNHK-IDQATFD 229 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------------------I 254 + + I + + +V R + I+ + ++ I Sbjct: 230 ELVDAIHYSWTHNSKTIIPAFAVGRTQEILYCLYLLKQQNRIPDIPIFLDSPLAIQTTKI 289 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSD-----ESFGLYPREQLIVIATG--SQGEPRS 307 +S + I+ + + + +I+ A+G + G + Sbjct: 290 FETYNSYLKFNDHPSFKTILDGLSVKYTPSVKESKEINELKGSAIIISASGMCNAGRIKH 349 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L + ++ V R I + I V +V Sbjct: 350 HLFNNAWKTGVSIVFVGYQAVGTLGRKIVDGAKTV-RIFGEDVAIKAKVYTLGG-----F 403 Query: 368 SGHPYPNDLKRMYQWI-RPQV-LVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 S H L + +PQ+ ++ +HGE +L Q+ V + L L Sbjct: 404 SAHAGQQQLLDWIGRMYQPQMEVLLVHGEEKAQEVFSKLIQQKYGLTVYIPSYLEQLELT 463 Query: 426 PDPIEIIDEVVHGLFLKDGFLIGK 449 + ++I + + + Sbjct: 464 AESQKVIVSESKNIQPVEWSKLTD 487 >gi|220905295|ref|YP_002480607.1| beta-lactamase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869594|gb|ACL49929.1| beta-lactamase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 536 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 12/108 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-KE 64 + LG + + + K IDCG+ G + I Sbjct: 1 MKVQFLGAAQTVTGSCYMIEAC----GKRFCIDCGM------HQGNKAIDARNREIEVYR 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 ++ + ITHAH DH G L + + PVY + LL+ Sbjct: 51 PTDIDFVLITHAHIDHSGLLPRIVRDGFNNPVYCTKATSELLDLMLQD 98 >gi|15672377|ref|NP_266551.1| hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|12723268|gb|AAK04493.1|AE006276_8 hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|326405971|gb|ADZ63042.1| beta-lactamase superfamily Zn-dependent hydrolase [Lactococcus lactis subsp. lactis CV56] Length = 270 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 11/172 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K + ++ I ++ ++ A+ ITH H DH + Sbjct: 20 SFYLETPKKKILVDAGLSGKKIESL--------LSEIDRDIHDIDALLITHEHSDHIKGI 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ L++K ++ F+ G + G IES V+H Sbjct: 72 GVLARKYGIDLYANEDTWSELDSKNALGKI-PVEQKHLFEMGKTMTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + V D + D + D + + + IL + Sbjct: 131 AIAPQFYRFMKDNKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEILRM 182 >gi|67920842|ref|ZP_00514361.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] gi|67856959|gb|EAM52199.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] Length = 552 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 54/415 (13%), Positives = 137/415 (33%), Gaps = 52/415 (12%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKE-RKNLMAIFITHAHEDHYGALHDLWSFL- 91 I++DCG+ D++ ++ + + + A+F +HAH DH L L Sbjct: 39 RILLDCGLG--------------DLSHLIDQTQTPVDAVFCSHAHRDHARGLKSLHEAFP 84 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK--VDVGAFSIESVRVNHSIPETM 149 ++P+YAS LL + K + +K +++ H +P Sbjct: 85 NLPIYASQVTKHLLPLNWPQKNPPKTSNFCQGLSWEKPLELFDDLTVQLFPSGH-LPGAA 143 Query: 150 ALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 ++++ +++TGD+ L + ++ ++ + A+ L+ + + Sbjct: 144 SILLSYRTSQRTYKLLYTGDFSLSNLQLVEGLS----IEALRGLSPDILIIEGSYGTIRH 199 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL---- 261 + ++ K+ + I + + ++ + I+ + + G L Sbjct: 200 SHRRQQE-KQLMQRIHECLTHGYSIVLPVPTLGLGQEILKLLRSHHQ---FTGRELDIWV 255 Query: 262 --------KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS 313 R + + + + ++ + +L + +G+ + Sbjct: 256 DGEVANACDRYLDLLSEFPLSVQNFAKHQPLFWDERICPRLRRLTPQQRGKIGQNSC-IV 314 Query: 314 RGEMRNVKLAEK----DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + E + A P NE G + ++ Sbjct: 315 LTDDLTTLYDEGYLLSGLWVILFPASP-NE---GQTLESPEIMSLMERVSIHSESYVLAE 370 Query: 370 HPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H + ++ +RPQ ++ +HG ++L L + + G ++ L Sbjct: 371 HSDGRNTTQLIHNLRPQHIIFVHGSTINLRDLTNLEELQNRYQLHLPSPGTLVEL 425 >gi|218893028|ref|YP_002441897.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] gi|218773256|emb|CAW29068.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] Length = 252 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 22/163 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPAELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G ++ + ++ V V+H E V+ D + Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTDLGM 141 >gi|326390130|ref|ZP_08211691.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325993778|gb|EGD52209.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 210 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 73/216 (33%), Gaps = 28/216 (12%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + R+ I+ID P + + +I+ N+ I +TH H Sbjct: 12 GANCYIVS--DEEEREAIVID-----PGEYSSEIQ------DYIITNNLNVKYILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + +L V S +L + VY+++ I GD + Sbjct: 59 FDHIGGVEELKKLTQARVAISKEDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLTF 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G +S+E + + I + + TGD D +L Sbjct: 119 GKYSVEVIYTPGHTKGGVCFKINN----VCFTGDILFKGSIGRYDFPGGDFSTLMDSIKN 174 Query: 190 GILALMCDSTNAMREGTCIS---EKGIKKNIYDIMK 222 +L L D T G + EK + + D+M+ Sbjct: 175 KLLVLGNDVTIYPGHGDSSTIGKEKRLNMFLRDLME 210 >gi|42526952|ref|NP_972050.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] gi|41817267|gb|AAS11961.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] Length = 470 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 71/492 (14%), Positives = 138/492 (28%), Gaps = 96/492 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 + F LG E+ + + +IDCG + D D P Sbjct: 3 IKFYSLGAAEEVTGS----KHILEVDGHKYLIDCGAFQGKRAEADKKNRDFNVPAPE--- 55 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVY 111 L A+ +TH H DH G L L +YA+P + ++A+ Sbjct: 56 -----LEAVILTHGHYDHCGLLPLLGKHGFTGNIYATPATRDIANLVMMDSARIQARDRE 110 Query: 112 ER----------------------VSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPET 148 + ++ +G +E H I + Sbjct: 111 YLSKQAAKKGETFKWVPLFDEADVIQTVNQFVTISYHRPAWIGPNVQLEFYDAGH-ILGS 169 Query: 149 MALVIRSPVGN-----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 VI + + I TGD + + D + ++ +ST R Sbjct: 170 AMAVITAKDSDGKEVKIAFTGDLGR-KNKAIIRDPDI-------IPPVDYIVIESTYGNR 221 Query: 204 EGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKI 254 K + + +I++N KG +++ F+ V R + I+ + I Sbjct: 222 RHEETDNALKLLAEKTQEIVQN-KGKMIIPAFA--VERTQEIVYYFHLLVDKRIIPDIPI 278 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS------- 307 + S+ Q + P + S E + Sbjct: 279 YVDSPMAVNATSIFQVHPECYDAQTHEAFLIHHKNPFGFNSLKFITSVAESKELNNIDGP 338 Query: 308 -------ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + + R EK + + ++N+ E + Sbjct: 339 MVIISADGMCEFGRITHHLANNIEKPSTKVLLVGFMAEDTLGRRLQNKEQEVKIFGEWHQ 398 Query: 361 AECPV----HVSGHPYPNDLKRMYQWIR-PQV--LVAIHGEPLHLVAHKELALQEGIACV 413 + S H + + ++ P++ + +HGEP + + G V Sbjct: 399 VRAEILQINAFSAHADYFESREWLDSLKNPKLKTIFLVHGEPKAQTYFTQYLNENGYNDV 458 Query: 414 PPVRNGKMLRLF 425 V+ G+ +L Sbjct: 459 KTVKYGRTYKLD 470 >gi|89096796|ref|ZP_01169688.1| YycJ [Bacillus sp. NRRL B-14911] gi|89088811|gb|EAR67920.1| YycJ [Bacillus sp. NRRL B-14911] Length = 264 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 13/171 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S + + I I + NL I +TH H DH + Sbjct: 17 IYVEADGQSFIVDAGLSGKQMEAL--------IKQIDRSLGNLSGILVTHEHSDHIKGVG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +PVYA+ + + +K +F G+ IES V+H Sbjct: 69 IVARKYGLPVYANEKTWQAMNGLIGEVPLDQK---FTFDMETVKSFGSLDIESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 E M + + D + D + D + + +L + Sbjct: 126 AEPMFYIFHHEGKKLALITDTGYVSDRMKGIIKNADAFVFESNHDVQMLRM 176 >gi|293115311|ref|ZP_05790857.2| VicX protein [Butyrivibrio crossotus DSM 2876] gi|292810350|gb|EFF69555.1| VicX protein [Butyrivibrio crossotus DSM 2876] Length = 276 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 15/177 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + I+ID G+S V +T + + +++ A+ ITH H+ Sbjct: 23 GNCIYIGTETTH----ILIDDGIS--------RKRVIEGLTMLDIKAEDIDALLITHEHD 70 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L + +PVY + + +E + AGD +G +I+S Sbjct: 71 DHTSGLGVLERYCPIPVYGTGMTLAAIENNSKL-GKVPEGIFNPIHAGDSFMIGDVTIKS 129 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGILA 193 V+H + +A S D D+ D + + + +L Sbjct: 130 TSVSHDAADPVAYTFSSGKSKAGIITDLGVYTDEIVENFKNLDTVLIESNHDINMLM 186 >gi|24372135|ref|NP_716177.1| metallo-beta-lactamase family protein [Shewanella oneidensis MR-1] gi|24346028|gb|AAN53622.1|AE015501_5 metallo-beta-lactamase family protein [Shewanella oneidensis MR-1] Length = 478 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 66/453 (14%), Positives = 133/453 (29%), Gaps = 89/453 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L +++DCG+ G + + + + ++A Sbjct: 6 LGAAREVTGSCHLVTVAGKH----LLLDCGLI-----QGGKADELRNHEPFVFDPQTIVA 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P+Y L ER +KK Sbjct: 57 VVLSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAK 116 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR--- 154 + + + I H I + + + Sbjct: 117 HDLAPLEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWLGE 175 Query: 155 -SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 IV +GD IL + T D+ ++ +ST R ++ Sbjct: 176 GKSQKKIVFSGDLGRAGMPILQNPTLVDT--------ADLVLMESTYGNRFHRSWTDTLA 227 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS---SLKRVVSVA 268 +K + ++G +L+ FS V R + ++ + ++ LG L +++ Sbjct: 228 ELKDIFAKTVNESQGNILLPAFS--VGRAQELLYLFHLYAKE-WDLGRWKICLDSPMAIE 284 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + L D + + + + + + + + + Sbjct: 285 ATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFIQTTEESIALNEVHKGLIIIAGSGM 344 Query: 329 IFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV-- 367 R E + + + E + + + +H Sbjct: 345 CNGGRIRSHLEHNLWRSECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKLHTVG 404 Query: 368 --SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 S H +L R Y+ +P LV +HGEP Sbjct: 405 GLSAHADQAELLRWYRHFEEQPP-LVLVHGEPE 436 >gi|146296037|ref|YP_001179808.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409613|gb|ABP66617.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 199 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 29/213 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG+I N ++G ++ ++ID P DD ++ V ++ + AI + Sbjct: 8 VGDILTNCYIFG-----EKEVVIID-----PGDDATKIENVI------VENKLVPCAILL 51 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRVYERVSKKIPCISFQAG---DK 128 TH H DH H L +P+YA +L A + V ++ + D Sbjct: 52 THGHFDHILGCHYLKQRFKLPIYAHENEKEILLNPAYNLSYIVGCEVTINCDEYFKDGDV 111 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT--DKDSLCAI 186 ++ G + + + P + G+I+ +GD D D+ D+ + Sbjct: 112 LEFGDLNFKVIHTPGHTPGSSCF---LYGGDILFSGDTLFKDSYGRCDLPLGDEKQIFES 168 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 L + ST G I I + + Sbjct: 169 IKNK-LLTLSKSTKV-YPGHGIP-TTIGDELKN 198 >gi|313887625|ref|ZP_07821307.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846234|gb|EFR33613.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 261 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 24/225 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N Y I+ID G+S + ++ I ++ A+F+TH H Sbjct: 12 GNCQYIEY----KNTKIIIDAGLS--------GKKIEENLKKIGVNPSDIDAVFVTHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L ++ V+++ + A + F+ G I Sbjct: 60 DHIKGVGVLSRRHNLKVFSNMMTLD---AMLPTVKKLDPKNTFIFENGKAFTFKDLDIMP 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD-WKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + H VI+ + T W + D ++ L + + + L+ Sbjct: 117 ISTFHDCASGCGFVIKGDKKLSLLTDTGWVNQEAMEKMDGSNLIYLESNHD--VDMLING 174 Query: 198 S------TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + + I+K + V++ S+ Sbjct: 175 TYPYPTKQRILSTKGHLSNENAGEVLAMILKKKQEQVILGHLSTD 219 >gi|302891279|ref|XP_003044522.1| hypothetical protein NECHADRAFT_83077 [Nectria haematococca mpVI 77-13-4] gi|256725445|gb|EEU38809.1| hypothetical protein NECHADRAFT_83077 [Nectria haematococca mpVI 77-13-4] Length = 274 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 20/178 (11%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I+ID ++ ++ ++ P + +++ A+ ITH H DHYG Sbjct: 108 TGDGIILIDA-LNNAEEAE---KVIIPGLKAFGYTARDIKALAITHEHFDHYGGAAWFQD 163 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + P+YAS A ++ K + GD +++G ++ P T+ Sbjct: 164 TFNTPIYASSAAWAGMK-KLQ----GTPSIDKTLDEGDVLEIGNTTVRVFSTPGHTPGTI 218 Query: 150 ALVIRSPVGNIVHTGDW---------KLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 +L+ H D + L + G+ L+ + Sbjct: 219 SLIFPVYDRGEKHVAGLYGGGGIPSKAEDKTTQVQSFLRFSRLAK--DAGVDVLLSNH 274 >gi|251779760|ref|ZP_04822680.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084075|gb|EES49965.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 263 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 16/148 (10%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G +M + S + I+ID G+ PG + + I + +L IF+TH H Sbjct: 12 GNSMFV-----ASEKSKILIDAGL-------PG-KRINEALKSINQSPNDLDGIFVTHEH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L +P+YA+ +E+ K+ + ++ Sbjct: 59 SDHIKGVGVLSRKYDIPIYANSNTWNAMESLI---GKIKEHNIKVIDKRSVTQIKDLDVK 115 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + H M I + + D Sbjct: 116 AFNIPHDSISPMGYTIANKNKKVSVATD 143 >gi|229098733|ref|ZP_04229673.1| Metallo-beta-lactamase [Bacillus cereus Rock3-29] gi|228684812|gb|EEL38750.1| Metallo-beta-lactamase [Bacillus cereus Rock3-29] Length = 239 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 30/176 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK ++ +PLG + N + + + I+ D G G LV T+ Sbjct: 31 MKWKQ---MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TY 70 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYE 112 + +E+ +A+ +THAH DH GA+ + H+PVY + + + Sbjct: 71 LQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDGTVNGSQIFMMNR 130 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 ++ K A + VG+F+ E P +++ S N V +GD Sbjct: 131 SITAKPADHIIDAEGTLTVGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|163814049|ref|ZP_02205441.1| hypothetical protein COPEUT_00202 [Coprococcus eutactus ATCC 27759] gi|158450498|gb|EDP27493.1| hypothetical protein COPEUT_00202 [Coprococcus eutactus ATCC 27759] Length = 265 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 21/184 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN---LMAIFITH 75 N G + +++D G+S + + T + E L I +TH Sbjct: 12 GNCYYVG----NDNTHLLVDAGISCKRVE-----------TALKDEGLKPSELNGILVTH 56 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-RVYERVSKKIPCISFQAGDKVDVGAF 134 H DH + L VP+YA+ ++E K + + +K+ + Sbjct: 57 EHIDHVKGIGVLARKHGVPIYATAGT--IMEMKNMSSLGSIDEGLFHEIRPDEKILINDI 114 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 ++ + H + + + I D +D I+ + + D + N + L Sbjct: 115 IVDPSSIWHDATDPVCYSLYGDGKKISIATDMGNFNDYIVDKLDNSDIMVVEANHDVRML 174 Query: 195 MCDS 198 S Sbjct: 175 EAGS 178 >gi|298291184|ref|YP_003693123.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] gi|296927695|gb|ADH88504.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] Length = 532 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 12/119 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 L F G + + L+ +S +++DCG+ F + Sbjct: 4 TLRFC--GAARTVTGSCFLFE----TSSSRVIVDCGL-FQGPKTLKA----LNYGAFPFR 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + A+ +THAH DH G L L ++A+ I L ++ ++ Sbjct: 53 PSQVDAVLLTHAHIDHSGLLPKLVREGFRGRIFATRGTIDLCSFMLPDAGSIQESEVVT 111 >gi|192292988|ref|YP_001993593.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|192286737|gb|ACF03118.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 542 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F G + + L+ + K ++DCG+ F +L + F Sbjct: 4 TIRFC--GAARTVTGSCYLFE----TKGKRFLVDCGL-FQGHKTLK-ELNYGAFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 + A+ +THAH DH G L L + A+ I L Sbjct: 53 PSEIDAVLLTHAHIDHCGLLPKLVREGFKGRILATRGTIDLCSYMLPDAG 102 >gi|328767951|gb|EGF77999.1| hypothetical protein BATDEDRAFT_27168 [Batrachochytrium dendrobatidis JAM81] Length = 440 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 101/330 (30%), Gaps = 17/330 (5%) Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + +A +THAH DH L L S VY +P LL+ + + Sbjct: 25 QHKHHTVAYLLTHAHADHMVGLVSLLSVNK--VYCTPVTAKLLQTTMGASNLFPIVFNKP 82 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 F + I + H P + ++I G I+ TGD++ D S Sbjct: 83 FH-IQLANNKHLQITFLP-AHHCPGSAMILIIGDNGTILCTGDFRS------EKRIDSLS 134 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 I I ++ D+T A + + + +++K V V S ++ Sbjct: 135 FA-IDRLSIDSVYLDTTFAHPNWMNLPTRLESANALIEVIKTYSESVNVYLQSKTIGYEH 193 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 + +A KI + S + + ++ + F ++ Sbjct: 194 LWVCLARHFNTKIYVTASRKIKYELMDQCKKADEEWLHECTVSQFLTTDEQEARFFVDMC 253 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 S + S + + + + V+ + + Sbjct: 254 PKAELSKTKGCLLNIHPSAMF-----WGRGSDSDAISHHTYWKRVSGFKDFIVQDLRDSM 308 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H ++L ++PQ + Sbjct: 309 SWRLLYSMHSSLSELIEFVAVLKPQRVYPT 338 >gi|317503285|ref|ZP_07961337.1| metallo-beta-lactamase superfamily protein [Prevotella salivae DSM 15606] gi|315665591|gb|EFV05206.1| metallo-beta-lactamase superfamily protein [Prevotella salivae DSM 15606] Length = 267 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ LG G G N Y + + ++ID GV G+ + Sbjct: 2 LKFISLG-SGSSG-NC----YYLFTEKDSLIIDAGV--------GIRTLKKHFKNYGLHL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ + ITH H DH ++ L ++ VY + +E ++ + + Sbjct: 48 EDVNHLLITHDHTDHVKSVGSLSKDYNLDVYTTKRVHEGIEHNYFIKKRIEPTHKKVIEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G +G F + V H + + +I+ V D Sbjct: 108 GTTYTIGDFIVTPFGVPHDSSDNVGYMIKYGDTTFVLMTDIG 149 >gi|312066528|ref|XP_003136313.1| DNA ligase I [Loa loa] gi|307768527|gb|EFO27761.1| DNA ligase I [Loa loa] Length = 581 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 20/202 (9%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-------EAKRVYERVSKKIPC 120 + F+THAH DHY A+ + W+ + P+Y SP +L +KR + Sbjct: 23 IKYYFLTHAHSDHYAAVDNKWN--NGPIYCSPVTAHILPIVTHRPRSKRA---GIRSHLI 77 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP---VGNIVHTGDWKLD-DDAILGD 176 + + FS+ + NH +P ++ + G I+ TGD++ D Sbjct: 78 HALDLNVWHHMDGFSVMLLDANH-VPGSVMFLFEGDKISEGPILFTGDFRADIRLYQNIF 136 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 ++ + + T +S I + ++ +K +T Sbjct: 137 AVSVLRERSLSTIYLDTTYINCTREEFPSREVSSAEICNVLRELFDGSK---PITIMVPK 193 Query: 237 VSRIRSIIDIAEQIGRKIVLLG 258 V R + ++D+A + KI + Sbjct: 194 VGREQLLVDVAVEFKCKIWVDY 215 >gi|167630564|ref|YP_001681063.1| metallo-beta-lactamase family protein [Heliobacterium modesticaldum Ice1] gi|167593304|gb|ABZ85052.1| metallo-beta-lactamase family protein [Heliobacterium modesticaldum Ice1] Length = 552 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 66/480 (13%), Positives = 133/480 (27%), Gaps = 92/480 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG + + L G +++DCG+ ++ + + F Sbjct: 1 MKLRF--LGAAQTVTGSCYLIDTGKTK----LLVDCGLYQGPKEIKERNY--GEFPF--- 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 + + +THAH DH G L L + A+ I L +++ Sbjct: 50 NPAAIDFVCLTHAHTDHSGLLPKLARLGFKGQILATAPTIDLCNIMLPDSGHIQEMEVER 109 Query: 119 ---------------------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMA 150 + + + + H I + + Sbjct: 110 KNRKASRSGKPLLQPIYTVRDAAETMKYFRPAGYRETIQLTPEIRVRFQDSGH-ILGSAS 168 Query: 151 LVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG- 205 L I IV +GD + I+ + T ++ +ST R+ Sbjct: 169 LEIWVTEAGKEAKIVFSGDLGNTNLPIVNEPT--------PITDADYIVVESTYGDRDHD 220 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI---------------IDIAEQI 250 S + + + + G +L+ +F+ + R + + IDI Sbjct: 221 RSRSRLDLLQEVIQETYDRGGKLLIPSFA--IERTQDLLYELAQLFQKKLVPDIDIYIDS 278 Query: 251 GRKIVLLGSSLKRVVS--------VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 I +K + + G+ L S + L A Sbjct: 279 PLAIAATEVFMKNMYYFDDEAKGFFTANNGVFSLPNLHYSRRAEESMALNSLQGRAIIIA 338 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 G + ++ N+ E + +A + + + Sbjct: 339 GSGMADAGRIKHHLKHNLWRKETTVLFVGFQAEG---TLGRRLLEGEKQVRIHGEEITVR 395 Query: 363 CPVH----VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + SGH + L + + P+ L HGEP + + +L Q+ Sbjct: 396 ANIRNVPGFSGHADRSGLINWLKHFQRPPKTLFITHGEPEAMNSFSDLIRQQLGWKTHIP 455 >gi|39937209|ref|NP_949485.1| beta-lactamase-like protein [Rhodopseudomonas palustris CGA009] gi|39651067|emb|CAE29590.1| Beta-lactamase-like [Rhodopseudomonas palustris CGA009] Length = 542 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F G + + L+ + K ++DCG+ F +L + F Sbjct: 4 TIRFC--GAARTVTGSCYLFE----TKGKRFLVDCGL-FQGHKTLK-ELNYGAFPF---R 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 + A+ +THAH DH G L L + A+ I L Sbjct: 53 PSEIDAVLLTHAHIDHCGLLPKLVREGFKGRILATRGTIDLCSYMLPDAG 102 >gi|307266553|ref|ZP_07548085.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918407|gb|EFN48649.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 210 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 72/216 (33%), Gaps = 28/216 (12%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + + I+ID P + + +I+ N+ I +TH H Sbjct: 12 GANCYIVS--DEEESEAIVID-----PGEYSSEIQ------DYIITNNLNVKYILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + +L V S +L + VY+R+ I GD + Sbjct: 59 FDHIGGVEELKKLTQARVAISKEDAPMLLDPSLNLSEMVYKRILCNPADILLSDGDTLTF 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G +S+E + + I + + TGD D +L Sbjct: 119 GKYSVEVIYTPGHTKGGVCFKINN----VCFTGDILFKGSIGRYDFPGGDFSTLMDSIKN 174 Query: 190 GILALMCDSTNAMREGTCIS---EKGIKKNIYDIMK 222 +L L D T G + EK + + D+M+ Sbjct: 175 KLLVLGNDVTIYPGHGDSSTIGKEKRLNMFLRDLME 210 >gi|298372805|ref|ZP_06982795.1| metallo-beta-lactamase family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275709|gb|EFI17260.1| metallo-beta-lactamase family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 475 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 56/497 (11%), Positives = 130/497 (26%), Gaps = 98/497 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----SFPKDDL---PGVDLVFPDI 58 + LG E+ + L + K I++DCG+ D+L G D Sbjct: 1 MQIEFLGATREVTGSKFLI---TTKGGKRILLDCGMYQGKGLETDELNRNLGFD------ 51 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------- 109 K + + ++HAH DH G + ++ + ++ L + Sbjct: 52 ------PKEIDFLILSHAHIDHSGLVPYIYKLGFRGSIISTSATRSLCQYMLIDSAFIQE 105 Query: 110 -----------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 + I+ + K + + Sbjct: 106 SDTSRYNKKAIQQRLQTASPLYTEEDARKCMGLFITSEFNHKFYINDNIAVCFYTTGHML 165 Query: 147 ETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + I +TGD +L + L+ +ST Sbjct: 166 GAACTYLEIKENGKITRIAYTGDIGRQHSYLLPTPENF--------PQCDYLITESTYGS 217 Query: 203 REGTCISEKG--IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGS 259 R + + + +Y+ +G +++ +F+ V R + I+ + Q + Sbjct: 218 RIHEPEEDAQNLLLQTVYNTCVEKRGKLIIPSFA--VGRCQEILYVLNQLYNEHKLPSIK 275 Query: 260 -------SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI-------ATGSQGEP 305 ++ + + + + I A +P Sbjct: 276 VFVDSPLAINATGVFLAHTEYLNDNVRRTMLYDDDPFSFNNVTYIRDVEKSKALNKYRKP 335 Query: 306 R-----SALAQLSRGEMR----NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 S + + R + +K ++ + G ++ Sbjct: 336 CIIISASGMLEAGRVKHHVANNIMKPQNTILIVGYCSPTTLGARIQEKGLRHISIFGNQI 395 Query: 357 IAEDAECPV-HVSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIAC 412 + SGH ++ + + P + + +HGE + +K+ + G Sbjct: 396 AVRADIKSIEAFSGHGDYREMIKYLRCQDPDKIKNIFLVHGEYQTQLQYKQHLQESGFRN 455 Query: 413 VPPVRNGKMLRLFPDPI 429 + L Sbjct: 456 IIIPEVKDKYVLQEQEA 472 >gi|282896420|ref|ZP_06304441.1| Beta-lactamase-like protein [Raphidiopsis brookii D9] gi|281198708|gb|EFA73588.1| Beta-lactamase-like protein [Raphidiopsis brookii D9] Length = 538 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 63/412 (15%), Positives = 133/412 (32%), Gaps = 55/412 (13%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 I++DCG + DI+ I K+ + I+HAH DH L L Sbjct: 28 HRILLDCGAA--------------DISSITKKNSPADLVLISHAHPDHCRGLLSLNRAFP 73 Query: 93 -VPVYASPFAIGLLEAKRVYERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETM 149 +P+Y S LL ++ I +E H +P + Sbjct: 74 LLPIYTSEVTSKLLPLNWTELGAAENITFCQALPLRSPVEVQEGLVVELFPAGH-LPGAV 132 Query: 150 ALVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-- 203 A+++ +++TGD+ L + ++ D L + + L+ + + Sbjct: 133 AILLTYQSPERDYKLLYTGDFFLSNSRLV----DGLRLEELRGLNLDVLLIEGSYGTSRH 188 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGS 259 E I + I + + + VL+ T + + + ++ + I + G Sbjct: 189 PHRRHQENQIAERINRAIID-RSSVLLPTPALGLGQELLMLLRSHHHFTGQDIDIWVDGE 247 Query: 260 ---SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS----ALAQL 312 + + + ++ + R ++ + S L Sbjct: 248 VSTGCDAYLGLLSHLPASVQNFARHQPLFWDERVRPRVRRLKVEDLDTLGSPPCIVLTDY 307 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + + + + + E ++N LV+ ++A+ H Sbjct: 308 KSDLNKYINQGDGASWVVLFP-----EKMASDLENPLVQTETYLLAQ----------HSD 352 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 ++ +RPQ +V IHG+P +L L + V G ++ L Sbjct: 353 GPGTTQLIHNLRPQHVVFIHGDPTYLADLTTLEELQNRYHVHSPLGGTLVEL 404 >gi|225431465|ref|XP_002274308.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 552 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 101/329 (30%), Gaps = 33/329 (10%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+THAH+DH + ++ P+Y++ L+ + + G + V Sbjct: 27 FLTHAHKDHSSGISTHSAY---PIYSTHLTKTLI---LQQYPQLDDSLFVGIEVGQSMVV 80 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDSL 183 G F + + NH P + + GNI+HTGD + + VT Sbjct: 81 DDPDGRFGVTAFDANH-CPGAVMFLFEGDFGNILHTGDCRLIPECLQNLPQKYVT---KK 136 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + D T S+ + + + + +V S + + + Sbjct: 137 GKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEIL 196 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 I+++ G KI + + + + L S E + Sbjct: 197 INVSRIFGSKIFV---DKANNPECFQALTHMVPEILSQDPSSRFQV-FEGFPKLC----E 248 Query: 304 EPRSALAQLSRGEMRN-VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 ++ LA+ + + + +P E N V + Sbjct: 249 RAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWHVC-- 306 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+ Q + P+ +V+ Sbjct: 307 ----YSIHSSRQELEWALQLLAPKRVVST 331 >gi|157363214|ref|YP_001469981.1| hypothetical protein Tlet_0349 [Thermotoga lettingae TMO] gi|157313818|gb|ABV32917.1| conserved hypothetical protein [Thermotoga lettingae TMO] Length = 522 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 66/497 (13%), Positives = 156/497 (31%), Gaps = 121/497 (24%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSF------------PKDDLPGVDL----VFP 56 G IG N L + M+D G++F P+ DL + P Sbjct: 8 GYDCIGGNKILV---ADKHNDGFMLDFGLNFSKWSLFFEEYLKPRSGKILHDLLKLNMIP 64 Query: 57 DITFIMKERK--------NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA- 107 I K+ + + +F++HAH DH G + + L P+ + +++A Sbjct: 65 RINIYRKDLQPPEFDENTKISFLFLSHAHADHCGMIGLIDESL--PLLVTGETFAIMKAG 122 Query: 108 --------------KRVYERVSKKIPCIS------------------------------F 123 KR + + F Sbjct: 123 AQIRQDVWDELYPKKRKKVGHNDDVLRHDILVAERNVKNRRKISLLSSSTQKKILEPDFF 182 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + D ++ + V HSI + L+ R + +TGD++ +++ + ++L Sbjct: 183 EEIDAKNLWKDELYIQPVYHSIIGSAGLIARVDDWWVAYTGDFRTGPESVEEENFWLENL 242 Query: 184 CA----------------IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 + +L ++ + + +E + +N+ ++++N Sbjct: 243 GEKRVQLSKRSDMFFDLLKNKKPLLLIVEGTRTTRQSEKDTTEWDVFQNVLNLLQNTNKL 302 Query: 228 VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF------- 280 V+ + R+ + + +A R +V++ + ++ + K + Sbjct: 303 VIADFSMKHLERLMTFLKVAIMTERTLVVMPKDYAYLETMGEVEPLWKLNDTEKNHIKIY 362 Query: 281 ---------LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNV-----KLAEKD 326 L + +++++++ +P + ++ N+ + E Sbjct: 363 HPAKSSFIGLEKKVVEKAKKDEILLLPDDINHKPSLYILAAGYWDIPNILDLNEDVLENC 422 Query: 327 TVIFSSRAIPGNEVAI--GHIKNRLVEQGVRVIAEDAECP--------VHVSGHPYPNDL 376 I S+ E I KN + ++ + H SGH L Sbjct: 423 LYIHSTSEAYSEEQQIDFRRFKNWIDRFSIKSFGFGVDSDGELRFSKQFHASGHVSAEKL 482 Query: 377 KRMYQWIRPQVLVAIHG 393 + + P +++ +H Sbjct: 483 SSIINTVSPDLILPVHT 499 >gi|327438196|dbj|BAK14561.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Solibacillus silvestris StLB046] Length = 262 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 11/151 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + +ID G+S K + I ++ KNL I +TH H DH L + Sbjct: 17 VENDEHSFLIDAGLSGKKMEQL--------FANIDRDMKNLSGILVTHEHSDHIKGLGVI 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 ++PV+A+ A C F G I+S V+H E Sbjct: 69 ARKYNIPVFANAKTW---TAMDGLVGTIPTDLCFDFNMETVKTFGGLDIQSFAVSHDAAE 125 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 M +V D D + G ++ Sbjct: 126 PMFYTFYENGRKLVVITDTGYVSDRMKGYIS 156 >gi|312959562|ref|ZP_07774079.1| beta-lactamase-like protein [Pseudomonas fluorescens WH6] gi|311286279|gb|EFQ64843.1| beta-lactamase-like protein [Pseudomonas fluorescens WH6] Length = 252 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 30/183 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LG + N L + ++++DCG S + + GV Sbjct: 1 MRFAVLGSGSQ--GNGTLVAH----DDTYVLVDCGFSLKETERRLLRLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L AI +TH H DH + L ++PVY S + + Sbjct: 45 --HPAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSRGTLRGMRKPIEPAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+++ +GA SI+ + V H E V D +L + D Sbjct: 97 --AGGEQLRIGALSIDVIAVAHDAQEPTQYVFSDGERRFGVLTDLGSYCTKVLDGYRNLD 154 Query: 182 SLC 184 +L Sbjct: 155 ALM 157 >gi|260584314|ref|ZP_05852061.1| VicX protein [Granulicatella elegans ATCC 700633] gi|260157832|gb|EEW92901.1| VicX protein [Granulicatella elegans ATCC 700633] Length = 268 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 14/150 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + ++ I++DCG++ + + I + ++ I +TH H Sbjct: 17 GNATYIE----TPQRKILVDCGLT--------GKAIAAQMEKIGRSVADIDTILVTHEHV 64 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L + +YA+ +E K V K+ F+ G G + S Sbjct: 65 DHIKGIGVLARKYGMDIYANEKTWKAMENK--NIGVIKQEQKHLFEPGVTKTFGDIDVMS 122 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V+H + V D Sbjct: 123 FAVSHDAASPQFYSFQKDQKQFVMLTDTGY 152 >gi|148669814|gb|EDL01761.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 557 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 24/199 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L PVY S LL+ K ++ + Sbjct: 318 AYFLTHFHSDHYAG---LSKDFTRPVYCSEITGNLLKKKLR----VQEQYIRQLPMDTEC 370 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V + + + NH P ++ + P I+HTGD++ D + Sbjct: 371 VVDSVKVVLLDANH-CPGATMILFQLPNGAVILHTGDFRADPSMER---------SRLAG 420 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIID 245 + L D+T E T S++ + + + A LV + + + + + Sbjct: 421 RKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLA 480 Query: 246 IAEQIGRKIVLLGSSLKRV 264 IA+ +G K+ G S ++ Sbjct: 481 IADVLGSKV---GMSQEKY 496 >gi|320159695|ref|YP_004172919.1| hypothetical protein ANT_02850 [Anaerolinea thermophila UNI-1] gi|319993548|dbj|BAJ62319.1| hypothetical protein ANT_02850 [Anaerolinea thermophila UNI-1] Length = 465 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 124/400 (31%), Gaps = 71/400 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFIMK 63 + LG + + L + ++++CG+ F D + FP Sbjct: 3 IRI--LGAAQTVTGSQHLLEI----NGARVLLECGL-FQGRRADTYTRNRTFPF------ 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ER 113 + L A+ ++HAH DH G L +L P+YA+P L E E Sbjct: 50 NPRRLDAVILSHAHIDHSGNLPNLVKQGFEGPIYATPATAELAEIMVRDSAHIQEADAEY 109 Query: 114 VSKKIPCISFQAGDKVDV----GAFSIESVRVNHSIPETMALVIRSPVGNIVH------- 162 ++KK + + A S V V ++ P A + + + H Sbjct: 110 LNKKRLRRGEPPIEPLYTRADAEAVSPLFVPVPYNQPFEPAPGVHARFVDAGHILGSAGV 169 Query: 163 TGDWKLDDD-AILGDVTDKDS-----LCA-IGNEGILALMCDSTNAMREGTCISE--KGI 213 D + + + D L + E L+ + T + Sbjct: 170 ILDLEENGTRRRVWFSGDIGREKLPLLKDPVLPENADYLLMECTYGDKPHRDPEAAYAEF 229 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 ++ + G V++ F+ V R + I+ SL R++S + Sbjct: 230 REVALRTFERG-GKVIIPAFA--VGRTQEIVY--------------SLNRMISDGDLPSV 272 Query: 274 IKKDQLFLSDESFGLYPRE--------QLIVIATGSQGEPRSALAQLSR-GEMRNVKLAE 324 L+ + ++ + + + L + E + + Sbjct: 273 PVYVDSPLAVNASEVFMKHLELFDEETRQFIREHRHPALDFPTLTYIRDVEESKALNGLP 332 Query: 325 KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 VI S+ + + H+KN L + V+ + P Sbjct: 333 GPMVIISASGMAETGRILHHLKNNLEDARNTVMIVSWQAP 372 >gi|313105955|ref|ZP_07792217.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] gi|310878719|gb|EFQ37313.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] Length = 252 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPAELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G ++ + ++ V V+H E V+ D Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTD 138 >gi|168204881|ref|ZP_02630886.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|170663698|gb|EDT16381.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] Length = 206 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIESVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|110800702|ref|YP_696615.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|110675349|gb|ABG84336.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] Length = 206 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIESVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|146281885|ref|YP_001172038.1| metallo-beta-lactamase superfamily protein [Pseudomonas stutzeri A1501] gi|145570090|gb|ABP79196.1| metallo-beta-lactamase superfamily protein [Pseudomonas stutzeri A1501] Length = 505 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 61/280 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + ++ + L ++++CG+ + + + K+L A Sbjct: 43 LGAIQQVTGSCYLIE---THDGARVLLECGMHQGRREEESDNRAAFAFD-----PKSLDA 94 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + ++HAH DH G L L + PV+ + LLE K Sbjct: 95 VVLSHAHIDHSGLLPRLVALGYRGPVHCTEATAELLELMLLDSAQIQEKDAEWENKWRAR 154 Query: 122 SFQAG------------------------DKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + ++ H I + + + Sbjct: 155 IGKPMVQPLYTRVDAERTLGQRAPHPYGETFEVARGVAVTFHNAGH-ILGSSIVQMDVHD 213 Query: 158 G----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD ++ T + ++ +ST R+ S + Sbjct: 214 HGRTRRLVFSGDLGNVCSPLMPAPTVL--------KEADVVLMESTYGDRDHR--SHEDT 263 Query: 214 KKNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQI 250 + + I++ A G VL+ +F+ V R + +I + Sbjct: 264 IEELAGILQQAHRDGGNVLMPSFA--VGRTQDLIYYLGRF 301 >gi|259502097|ref|ZP_05744999.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259169910|gb|EEW54405.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 268 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 13/168 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + + I+ID G+ ++ + I + ++ AIF+TH H DH + L Sbjct: 24 ETDQHRILIDAGL-----SGKKIEGLMAKID---RSLADVEAIFVTHEHSDHCHGVGVLA 75 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 + VYA+ + K F +G IES V+H E Sbjct: 76 RRYGMAVYANRGTWQAMANKV---GAIPDEQKFIFNPNSVQTLGDLDIESFAVSHDAAEP 132 Query: 149 MALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + D + D A D + + +L + Sbjct: 133 QFYQVHHDNKTFCILTDTGYVSDRVAGTIRDADAYLMECNHDTEMLRM 180 >gi|90415976|ref|ZP_01223909.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] gi|90332350|gb|EAS47547.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] Length = 253 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 20/162 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L +M+DCG S + + K Sbjct: 1 MRFASLG-SGSKG-NSTLVE----WRDTCLMVDCGFSIRDTTQ--------RLAKLGKTP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +N+ AI +TH H DH+ + L S + VY G + +++ R P + Sbjct: 47 ENIDAILVTHEHSDHWKGVVPLASKFAIDVYV---TAGCMRSRKASGR---DYPFKVMDS 100 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 +G + V V H E + + S + D Sbjct: 101 HQAFQIGDLRVTPVPVPHDAREPVQFLFNSEQHQLGILTDVG 142 >gi|266624290|ref|ZP_06117225.1| metallo-beta-lactamase family protein [Clostridium hathewayi DSM 13479] gi|288863871|gb|EFC96169.1| metallo-beta-lactamase family protein [Clostridium hathewayi DSM 13479] Length = 533 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 66/499 (13%), Positives = 143/499 (28%), Gaps = 107/499 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----FPDITFI 61 + + +G E+ + I++DCG+ GVD P +++ Sbjct: 1 MKLMFIGADHEVTGSCHYLEAAGLK----ILVDCGMK------QGVDYFENAELP-VSY- 48 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI-- 118 + + +THAH DH G + +++ + + L ++ Sbjct: 49 ----SEIDYVLLTHAHIDHAGMIPFIYARGFRGEIITTEATADLCNIMLKDSAHIQESEA 104 Query: 119 -----------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPET 148 + + + +I V H + + Sbjct: 105 EWKNRKARRAGRQEEVPLYEMNDAMGVLKQFNPCSYDEIIKLEEGLTIRFTDVGH-LLGS 163 Query: 149 MALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR- 203 ++ + + IV +GD + ++ D + ++ + T R Sbjct: 164 ASIEVWIKENDISKKIVFSGDIGNKNKPLIRDPQYI--------KNADYVVMECTYGDRL 215 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS-LK 262 G I +I + G V++ F+ V R + ++ + I + ++ G + Sbjct: 216 HGQIPDHVSILADIVQRTLDRGGNVVIPAFA--VGRTQELLYMFRIIKAEHMVKGHDGFE 273 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVK 321 V + V + L D Y E ++ G L ++ E R++ Sbjct: 274 VYVDSPLAVEATSVFKDNLVDC----YDEETKALVTQGINPISFPGLKLSITSAESRDIN 329 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE---------------------- 359 K VI S+ + H+K+ L ++ Sbjct: 330 FDTKPKVIISAAGMCDAGRIRHHLKHNLWRPECTIVFTGYQSIGTLGRSLLEGGREVRLF 389 Query: 360 --------DAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEG 409 E +S H L + +P+ + +HG + L +E Sbjct: 390 GETIQVEAHIEKMDGMSAHADMEGLIQWLNAFEEKPREVFLVHGNDEVCDSFGNLLKEEY 449 Query: 410 IACVPPVRNGKMLRLFPDP 428 +G + L Sbjct: 450 GYQADAPYSGSVYDLAAGR 468 >gi|225568654|ref|ZP_03777679.1| hypothetical protein CLOHYLEM_04732 [Clostridium hylemonae DSM 15053] gi|225162582|gb|EEG75201.1| hypothetical protein CLOHYLEM_04732 [Clostridium hylemonae DSM 15053] Length = 536 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 118/371 (31%), Gaps = 70/371 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L + I++DCG+ G DL D I Sbjct: 1 MKLTFI--GADHEVTGSCHLIEACGKN----ILVDCGM------EQGPDLY--DNQEIPV 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 ++ + +THAH DH G + L + ++ L Sbjct: 47 TPADIDYVLLTHAHIDHSGKIPMLCKQGFKGDIISTFATADLCNIMLRDSAHIQEFEAEW 106 Query: 106 ---EAKRVYERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMA 150 +AKR + + + + + V H + + A Sbjct: 107 RNRKAKRSGAEPYEPLYKMEHAEAAIKLLSPCDYNERITLCEGIDVRFTDVGH-LLGSAA 165 Query: 151 LVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + I IV +GD + I+ D ++ ++ +ST R Sbjct: 166 IEIWITENDAQKKIVFSGDIGNLNQPIIK---DPQTIKE-----ADYVVIESTYGNRTHG 217 Query: 207 CISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLLGSSLKR 263 + + + I G ++V +F+ V R + ++ +I R ++ + + Sbjct: 218 VETPDYVGEFTRILRETFEKGGNLVVPSFA--VGRTQELLYFIREIKERNLLPEYPNFEV 275 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKL 322 V + + + + + + L ++ G L ++ E R + Sbjct: 276 YVDSPLAIEATNVFNKNV----WSCFDEDALALVNKGVNPLVFRGLKTTITSDESRMINF 331 Query: 323 AEKDTVIFSSR 333 ++ VI S+ Sbjct: 332 DDRPKVILSAS 342 >gi|241764834|ref|ZP_04762839.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|241365629|gb|EER60353.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 261 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 47/218 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G I + I+ID G L + Sbjct: 1 MKVRV--LGCSGAISQGCRTTSFLIDGH---ILIDAGTGVGDLTL--------------E 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKK 117 E + +F+TH+H DH AL + V V+A I L+A + Sbjct: 42 EMHRVNHVFLTHSHLDHVAALPLMLDAVSSMRETSVKVHALADTIAALQAHIFNNVIWPD 101 Query: 118 IPCISFQA-----------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I + G ++V + IE + H++P +R G V +GD Sbjct: 102 FSRIPHPSAPFLEYSALEVGQLLNVASIDIEVLPAMHTVPSA-GYALRGRTGWWVFSGDT 160 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + I + + L+ ++ + RE Sbjct: 161 ----------APNPAFWQRINDLPVAMLVIETAFSNRE 188 >gi|152993217|ref|YP_001358938.1| metallo-beta-lactamase family protein [Sulfurovum sp. NBC37-1] gi|151425078|dbj|BAF72581.1| metallo-beta-lactamase family protein [Sulfurovum sp. NBC37-1] Length = 201 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 25/175 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ P+G N + K +ID PG+D ++M Sbjct: 1 MEIKIQPMGVYQ---TNCYIV----TVDGKDFIID----------PGIDA----TDWVMN 39 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 N +AI TH H DH + +L L +P+Y +L + + K P Sbjct: 40 NVTNPIAILNTHGHFDHVWSNAELKEKLQLPIYCPKGDTFMLTDDPLGQGTPKSTPDYEV 99 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 +++ + I+ P + + + +GD+ D Sbjct: 100 DGDEELTIEGVKIKYRHFPGHTPGCSIIEMGD----VWFSGDFLFQQSIGRWDFP 150 >gi|15596209|ref|NP_249703.1| hypothetical protein PA1012 [Pseudomonas aeruginosa PAO1] gi|116048940|ref|YP_792259.1| hypothetical protein PA14_51250 [Pseudomonas aeruginosa UCBPP-PA14] gi|9946922|gb|AAG04401.1|AE004533_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115584161|gb|ABJ10176.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa UCBPP-PA14] Length = 252 Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPVELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G ++ + ++ V V+H E V+ D Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTD 138 >gi|256848488|ref|ZP_05553930.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256714755|gb|EEU29734.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 269 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 19/220 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++ I+ID G+S + + I + K++ AIF+TH H DH + L Sbjct: 23 IETAHHRILIDAGLS--------GKQIEARMAAINRSLKDVEAIFVTHEHSDHSHGVGVL 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + +YA+ ++ K + +K G D G +ES V+H E Sbjct: 75 ARRYGLDIYANRGTWQAMDNKIGKVPLDQK---HLIAPGSVKDFGDLQVESFAVSHDAAE 131 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA------ 201 + D + + G + D D+ N L+ + + Sbjct: 132 PQFYQVHHDNKAFCILTDTGYVSERVAGTIRDADAYLMECNHDTEMLINGTKYSWPLKQR 191 Query: 202 --MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 EG +E G + I ++ K ++ + +R Sbjct: 192 ILGDEGHLSNEDGAEALTSVIGRHTKEVIIGHRSHENNTR 231 >gi|254479911|ref|ZP_05093159.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] gi|214039473|gb|EEB80132.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] Length = 252 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 20/156 (12%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N L +G +MIDCG S + + + + L A+ Sbjct: 7 GSGSKG-NATLVRHG----ETLLMIDCGFSLRETTR--------RMARLGLSPEQLDAVL 53 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH + L + +PVY + R + F + + Sbjct: 54 VTHEHSDHCAGVSKLSAKHQIPVYLTHGTKA-------SGRCDGSYELLCFDCDENFSIA 106 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + ++ V H E + + + D Sbjct: 107 EIDVRTIAVPHDAAEPCQFRLSAGGRCLGILTDLGC 142 >gi|167758304|ref|ZP_02430431.1| hypothetical protein CLOSCI_00642 [Clostridium scindens ATCC 35704] gi|167664201|gb|EDS08331.1| hypothetical protein CLOSCI_00642 [Clostridium scindens ATCC 35704] Length = 265 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 21/168 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKNLMAIFIT 74 N G +++D G+S + + G+ + + L I IT Sbjct: 12 GNCIYVG----DDDTHLLVDTGISKKRIEQGLHTLGI------------KGEELNGILIT 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L +P+YA+ I + + + +G Sbjct: 56 HEHVDHIQGLGVFSRKYGIPIYATRGTIEGIRC-CTSLGKMPEGLLHDVPVDETFSLGGM 114 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 SI ++H E I + ++ D D+ + + D ++ Sbjct: 115 SIRPFAISHDAKEPSGYRIENETKSVAVATDLGKYDEYTVAHLKDLNA 162 >gi|255280797|ref|ZP_05345352.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] gi|255268734|gb|EET61939.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] Length = 209 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 19/158 (12%) Query: 17 IGM-NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 IGM + +Y + +++ ++D P D G +L+ +I K +L AI +TH Sbjct: 11 IGMVSTNVYLAVNEETKEAFLVD-----PAD---GAELI---EDWIAKAGASLKAILLTH 59 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD-----KVD 130 H DH GA+ L + L VPVYA +LE + + Sbjct: 60 GHFDHIGAVMKLKADLQVPVYAMQAEKTVLEDPLLNASAKFGKSFSVKGDRFLTDGAILS 119 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V F I + P ++ +GD Sbjct: 120 VAGFDITVYHTPGHTKGGACYYL--PEEKVLFSGDTIF 155 >gi|229061955|ref|ZP_04199282.1| Metallo-beta-lactamase [Bacillus cereus AH603] gi|229169007|ref|ZP_04296723.1| Metallo-beta-lactamase [Bacillus cereus AH621] gi|228614416|gb|EEK71525.1| Metallo-beta-lactamase [Bacillus cereus AH621] gi|228717339|gb|EEL69011.1| Metallo-beta-lactamase [Bacillus cereus AH603] Length = 209 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ + + Sbjct: 6 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEAQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G+FS E P +++ S N V +GD Sbjct: 109 HIIDEEGTLTIGSFSFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|268679971|ref|YP_003304402.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268618002|gb|ACZ12367.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 197 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 24/168 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ID PGV+ ++++ E KN +AI TH H D Sbjct: 14 NCYIVFIHGKE----LIID----------PGVNA----TSWVLAEVKNPVAILNTHGHFD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + L LH+P+YA +LE + + + +K+D+ + + Sbjct: 56 HVWSNEALSKTLHIPIYAPKEDCFMLENDPFLQGTPSSKADVCVEPDEKLDIAGIEVSFL 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 P A++I + +GD+ + +D + Sbjct: 116 HFPGHTPGCSAILIEDA----LFSGDFIFKNSIGRYDFPYSDAKQMRH 159 >gi|94264055|ref|ZP_01287855.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] gi|93455566|gb|EAT05753.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] Length = 469 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 66/468 (14%), Positives = 129/468 (27%), Gaps = 82/468 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++DCG+ F +L K L + ++HAH DH G + Sbjct: 16 QHLLEVNGKRILLDCGL-FQGKRKEAFELNRQGF----CNGKKLDCLILSHAHIDHSGNI 70 Query: 85 HDLWSF-LHVPVYASPFAIGLLEAKRVY-ERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 L +Y + L + + ++ + ++ F + + Sbjct: 71 PCLVKSGFDGDIYTTQATRDLCAIMLMDSANIQEQDVQFVNKRRERNGQQPFEPLYTKED 130 Query: 143 ---------HSIPE------TMALVIRSPVGNIVHTGDWKLD-------DDAILGDVTDK 180 P + + G+++ + + LD + L D Sbjct: 131 VVLAMPQFVGIAPGRRREIYPGIHLTLAEAGHMLGSANVILDIKEQESGQNRRLIFSGDI 190 Query: 181 DSLCAIGNE-------GILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTT 232 G L+ +ST R+ + + I + +GC+L+ Sbjct: 191 GRFGIPIIRDPARLTAGCDVLIMESTYGDRQHPPYPDSEKELVRIVNETHTRRGCLLIPA 250 Query: 233 FSSSVSRIRSIIDIAEQ-------------------------IGRKIVLLGSSLKRVVSV 267 F+ V R + +I + ++ + Sbjct: 251 FA--VGRTQQLIYALHKLYLAGEIPELPIYVDSPLATRATDIFRLHPEAYDREIRDFILQ 308 Query: 268 AIDVGIIKKDQLF----LSDESFGLYPREQLIVIATGSQGEPRSALAQLSR--GEMRNVK 321 + L +++ RE I+I+ E L L G+ +N Sbjct: 309 GNHDNPFGFETLRYTQSVAESQRLNLLREPAIIISASGMMEGGRILHHLRNRVGDAKNTI 368 Query: 322 LAEKDTV--IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRM 379 L + I G E + I RV E SGH + L Sbjct: 369 LVTGWQAPNTLGRKIIEGQE--VIKIFGEEFPLKARV-----EMITGFSGHADRDGLLAW 421 Query: 380 YQWI--RPQVLVAIHGEPLHLVAHKELALQ-EGIACVPPVRNGKMLRL 424 + +P +HGE A + G + + + Sbjct: 422 AGAMEQKPAHTFLVHGESAATAALATALKEKSGFNRIYIPELHQSFEV 469 >gi|49082232|gb|AAT50516.1| PA1012 [synthetic construct] Length = 253 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I++DCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILVDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + P +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHPVELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G ++ + ++ V V+H E V+ D Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTD 138 >gi|30264333|ref|NP_846710.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47529780|ref|YP_021129.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187160|ref|YP_030412.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|165872070|ref|ZP_02216710.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167634677|ref|ZP_02392997.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167638646|ref|ZP_02396922.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170687412|ref|ZP_02878629.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170707422|ref|ZP_02897876.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177655038|ref|ZP_02936704.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190566061|ref|ZP_03018980.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227817036|ref|YP_002817045.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229603832|ref|YP_002868551.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254684020|ref|ZP_05147880.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254736369|ref|ZP_05194075.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254741406|ref|ZP_05199093.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254753958|ref|ZP_05205993.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254757829|ref|ZP_05209856.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|30258978|gb|AAP28196.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47504928|gb|AAT33604.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181087|gb|AAT56463.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164712201|gb|EDR17738.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167513494|gb|EDR88864.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167530129|gb|EDR92864.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170127666|gb|EDS96539.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170668607|gb|EDT19353.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172080299|gb|EDT65388.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190562980|gb|EDV16946.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227007663|gb|ACP17406.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229268240|gb|ACQ49877.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 208 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 26/167 (15%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF-------AIGLLEAKRVYERVSKKIPCI 121 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEDWLGDATVNGSQIFMMNRSITAKPADH 108 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 109 IIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 153 >gi|330685998|gb|EGG97621.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU121] Length = 207 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +K +++D P + D + + + K L AI +THAH DH GAL Sbjct: 16 YFIENDKKVLLVD-----PSSET---DKIV---KKLNQINKPLEAIILTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ + +VPVY L K + + I + +A D + +G F+ Sbjct: 65 DIINKYNVPVYMHKEEFDFLNDPEKNGASKFKQYGMPQVISQANPEALDEGQAQIGDFTF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P +++ V + + D ++L + + L Sbjct: 125 NVLHTPGHSPGSLSFVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIKDKLFEL 180 >gi|257060686|ref|YP_003138574.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] gi|256590852|gb|ACV01739.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] Length = 549 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 141/382 (36%), Gaps = 29/382 (7%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY-GALHDLWSFLH 92 I++DCG+S + P V P + +F +HAH DH G L +F Sbjct: 39 RILLDCGLS---NLTPLVSQAQP----------PVDMVFCSHAHADHARGLLALHQAFRD 85 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMAL 151 +P+YAS LL E S+ C + +++ ++E R H +P A+ Sbjct: 86 LPIYASEVTAQLLPLNWPKEPSSETSFCQPLKWRSPLEIDENLTVELFRAGH-LPGASAI 144 Query: 152 VIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 ++ +++TGD+ L + ++ ++ ++L + + IL + Sbjct: 145 LLSYQTPQRTYKLLYTGDFSLSNLQLVEGLS-VEALRGLSPD-ILIIEGSYGTGRHPHRR 202 Query: 208 ISEKGIKKNIYDIMKNAKGCVL-VTT--FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 EK + + IY+ + + +L V T + ++ I + G+ + + Sbjct: 203 QQEKHLMQRIYEALSVGQSVLLPVPTLGLGQEILKLLRSHHQFTGRDLDIWVDGN-VAKA 261 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ--LSRGEMRNVKL 322 + +++ + + L+ E++ + R L Q V L Sbjct: 262 CDIYLELLAEFPPSVQNFAKHQSLFWDERICPRLRRLTPQQRGTLGQTPCIVLTDNLVHL 321 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 ++ ++ S I E + + + ++ H + ++ Sbjct: 322 HDEGFLMLGSWLILMPEHEGLR-PDSPEILALNQLPLIHLDTYLLAEHSDGRNTTQLIHN 380 Query: 383 IRPQVLVAIHGEPLHLVAHKEL 404 +RPQ ++ +HG P+ L L Sbjct: 381 LRPQHIIFVHGAPMDLADLTNL 402 >gi|291513679|emb|CBK62889.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Alistipes shahii WAL 8301] Length = 246 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 20/142 (14%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + R+ ++++ GV F + ++ ITH H+DH G + Sbjct: 14 SYILENDREALLLEAGVRFASVKQ-----------ALDYNITKVVGCLITHEHKDHAGYI 62 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +++ VPVYAS I + +AG +G F I H Sbjct: 63 NEVLKAT-VPVYASAGTI-------ENTPIEGPRRANVCKAGTLFTLGGFRIIPFGTKHD 114 Query: 145 IPETMALVIRSPVG-NIVHTGD 165 E + I NI+ D Sbjct: 115 SAEPLGFFINHEETGNILFATD 136 >gi|296390630|ref|ZP_06880105.1| hypothetical protein PaerPAb_20851 [Pseudomonas aeruginosa PAb1] Length = 252 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 22/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G + + SS I+IDCG FP + + + + Sbjct: 1 MRFAVLG-SGSRGNSALV-----SSSDTRILIDCG--FPLRE------IIKRLARLGLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH + L +PVY S + + +A Sbjct: 47 AQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRR--------PVHHVELLRA 98 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G ++ + ++ V V+H E V+ D Sbjct: 99 GQRLAIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTD 138 >gi|228475969|ref|ZP_04060677.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228269792|gb|EEK11272.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 208 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 54/179 (30%), Gaps = 24/179 (13%) Query: 26 YGSPSSRKWIMID-CGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y S +++D G S D + + + K L AI +THAH DH GAL Sbjct: 16 YFIESDNSVLLVDPAGES---------DKI---FKQLNQINKPLKAILLTHAHFDHIGAL 63 Query: 85 HDLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFS 135 D+ S VPVY L K + A D + F Sbjct: 64 DDVLSKYDVPVYMHKEEFSFLTDPEKNGSSKFKQYGMPLTTSKAQPIALDEGNFTIDEFK 123 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + + L Sbjct: 124 FNVIHTPGHSPGSLTYVFDDFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKLFEL 180 >gi|169343636|ref|ZP_02864635.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169298196|gb|EDS80286.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] Length = 206 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ IM+D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIMVD-----PGEEASRIENVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|294934698|ref|XP_002781196.1| hypothetical protein Pmar_PMAR019520 [Perkinsus marinus ATCC 50983] gi|239891531|gb|EER12991.1| hypothetical protein Pmar_PMAR019520 [Perkinsus marinus ATCC 50983] Length = 606 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 82/311 (26%), Gaps = 82/311 (26%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSP----SSRKWIMIDCG--VSFPKDDLPGVDL---VF 55 + LG +G + L + P R I++DCG VS G + V Sbjct: 14 RIEVDVLGAGRSVGRSCVLVTFVPPASSCKPRVRILLDCGANVSCGDPAHHGDEKQHSVV 73 Query: 56 PDI--------------------------TFIMKERKNL------------------MAI 71 + + K R + A+ Sbjct: 74 AEHADDDDLDSVGDSSATTPQQLLRSVIRHSLAKHRHRVPMLDRLWPDNSKTGMLPLDAV 133 Query: 72 FITHAHEDHYGALHDLWS------FLHVPVY---ASPFAI-GLLEAKRVYERVSKKIPCI 121 +TH H DH GAL L + + LL + PC Sbjct: 134 LVTHFHLDHTGALPYLTEVLMSGQRRSPEIVMSLMTKLTAPMLLRDYAKEQSPPPYYPCH 193 Query: 122 SFQAGDKVDVG----------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 +K V + + H + + +I + +TGD+ + Sbjct: 194 IESCFEKALVMAPGSQRTLTCGAVVTAYPAGH-VVGALMFMIEYEGLTLFYTGDFSTQAE 252 Query: 172 AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI--------KKNIYDIMKN 223 + + + I ++ ++T K ++ + D M + Sbjct: 253 FTMPAANLLTRQLPLTGKTIDVVISEATFGSSVHMNSRSKEARLCNIVCGRERLRDYMGS 312 Query: 224 AKGCVLVTTFS 234 A L+T Sbjct: 313 ADVPPLITVMP 323 >gi|229013481|ref|ZP_04170618.1| Metallo-beta-lactamase [Bacillus mycoides DSM 2048] gi|228747893|gb|EEL97759.1| Metallo-beta-lactamase [Bacillus mycoides DSM 2048] Length = 209 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ + + Sbjct: 6 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEAQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+FS E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFSFEIFETPGHSPGSISYY--SKAANAVFSGDVLF 154 >gi|229093330|ref|ZP_04224439.1| Metallo-beta-lactamase [Bacillus cereus Rock3-42] gi|228690054|gb|EEL43853.1| Metallo-beta-lactamase [Bacillus cereus Rock3-42] Length = 221 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 18 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 121 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 166 >gi|323706436|ref|ZP_08117998.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534221|gb|EGB24010.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 213 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 53/190 (27%), Gaps = 29/190 (15%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G N + + IM+D G P+ + +++ L I I Sbjct: 12 VGRFQANCYIVSAKGSH--ECIMVDAGNFVPEVE-----------DYLIDNDFRLKYILI 58 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVSK---KIPCISFQAGD 127 TH H DH G + V +L+ K K I + GD Sbjct: 59 THGHFDHIGGIDYFRDKFGAKVCIGTDDAEMLKNPAMNLSEFGFGKIISKDADILLRDGD 118 Query: 128 KVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLC 184 + G I ++ P + I TGD + D + + Sbjct: 119 TLSFGEGIFITTIHTPGHTPGGVCYKIDDA----CFTGDTLFKESIGRTDFPGGDFNEII 174 Query: 185 AIGNEGILAL 194 + L Sbjct: 175 NSIKNKLFML 184 >gi|288925045|ref|ZP_06418981.1| metallo-beta-lactamase superfamily protein [Prevotella buccae D17] gi|288338235|gb|EFC76585.1| metallo-beta-lactamase superfamily protein [Prevotella buccae D17] Length = 267 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 16/190 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N Y + ++ID GV D K Sbjct: 2 LRFISFG-SGSSG-NC----YYLFTDTDALLIDVGVGLRTLKKHFHDY--------GKRL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ I ITH H DH ++ + +PV+ + +E + + Sbjct: 48 DSVHHILITHDHADHVKSVGSVCRDFRLPVFTTRKVHEGIERNYCVRQKINPAFVHVIEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSL 183 +G F + V H + + I D D+ + + ++ + Sbjct: 108 ATPFTLGEFHVTPFGVPHDSADNVGYKIECEGVVFSLMTDVGHLTDEMLQVIEESNYLVI 167 Query: 184 CAIGNEGILA 193 A ++ +LA Sbjct: 168 EANHDKEMLA 177 >gi|152976694|ref|YP_001376211.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025446|gb|ABS23216.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 209 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ ++ D G G LV T++ +E Sbjct: 6 MPLGPLQ---TNAYILS---NDQKECVIFDPGSE-------GEKLV----TYLQQEGLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASP--------FAIGLLEAKRVYERVSKKIPC 120 +AI +THAH DH GA+ + +PVY A+ + + ++ K Sbjct: 49 LAILLTHAHFDHIGAVDAVREAFRIPVYVHKEEAEWLGDPAVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G F+ E P +++ N V +GD Sbjct: 109 YRIDGEGTLTIGPFTFEMFETPGHSPGSISYY--CKEVNAVFSGDVLF 154 >gi|118392416|ref|XP_001028800.1| putative FEG protein [Tetrahymena thermophila] gi|89282491|gb|EAR81137.1| putative FEG protein [Tetrahymena thermophila SB210] Length = 178 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 32/142 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI- 61 + + PLG ++G + Y CG+ +DL +PD I Sbjct: 7 KDCIEVYPLGAGQDVGRS-----Y------------CGLHMGVNDL----TRYPDFEKIK 45 Query: 62 ------MKERKN--LMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGLLEAKRVY 111 K + + + + I+H H DH GAL P+Y + LL Sbjct: 46 QIWNIPEKRKWDQIIDLVLISHFHLDHIGALPYFTEIYNYDGPIYMTSPTKALLPYMCED 105 Query: 112 ERVSKKIPCISFQAGDKVDVGA 133 R D + Sbjct: 106 FRKVITESQKKEFTDDSIPQTP 127 >gi|127514255|ref|YP_001095452.1| RNA-metabolising metallo-beta-lactamase [Shewanella loihica PV-4] gi|126639550|gb|ABO25193.1| RNA-metabolising metallo-beta-lactamase [Shewanella loihica PV-4] Length = 481 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 64/485 (13%), Positives = 139/485 (28%), Gaps = 93/485 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L S + +++DCG+ +D + F+ + + + A Sbjct: 8 LGAAQEVTGSCHLL----DISGRQVLLDCGLIQGGK----LDALRNHEPFLFEPTE-IHA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P+Y + L E ER++KK Sbjct: 59 VVLSHAHIDHSGRLPLLVKSGFTGPIYTHKATVELCEVMLRDAAMLQVRDVERLNKKRVK 118 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIRSPV 157 + + + V + H I + + + Sbjct: 119 MDLPPLEPLFDEEDVALVIKQFVALDYGQSVKVVPQLTACLSDAGH-ILGSAVVELWLGE 177 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKK 215 G+ + D + D +L + ++ +ST R + +K Sbjct: 178 GSERKKLVFSGDLGRAGMPILDDPTL----IDDADLVLMESTYGDRLHRSWDDTLAELKA 233 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 +K ++G +L+ FS V R + ++ + ++ L S R+ + + Sbjct: 234 IFAKTIKESRGNILLPAFS--VGRAQELLYLFHLYAKEWAL---SNWRICLDS----PMA 284 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLS---------RGEMRNVKLAEKD 326 + ++ L + P + + + + Sbjct: 285 IKATQIYVANYQLMDEDFKRFTRLSPGKHPLLSNVDFIDSTQESMELNEIHQGLIIIAGS 344 Query: 327 TVIFSSRAIPGNEVAIGH-------------------IKNRLVEQGVRVIAEDAECPVHV 367 + R E + + + + + + +H Sbjct: 345 GMCNGGRIRSHLEHNLANPQSDVIICGFQALGTPGRLLVDGAESLTIHGRDIPVKAKIHT 404 Query: 368 ----SGHPYPNDLKRMYQWIR---PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 S H +L Y+ + P +L+ E + + + V G Sbjct: 405 VGGLSAHADQAELIHWYRHFKHTPPLILIHGEREAQQRLKAELVPEGSQSPHVVIAERGD 464 Query: 421 MLRLF 425 L L Sbjct: 465 TLDLT 469 >gi|313893093|ref|ZP_07826670.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442446|gb|EFR60861.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 211 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++LV + PLG + G N + G + + +ID ++ Sbjct: 1 MSEQQLVLMRMPLGPL---GTNCYVI--GDKAVGEAFIIDP----ATSEVL--------- 42 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE--- 112 + K A+ +TH H DH G + D+ + HVPVY + L E Sbjct: 43 DALKKHDLKPKAVLLTHGHSDHIGGVQDIVNTHHVPVYVHKGDVPYLSDPELNLSAYSNP 102 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + + I + GD + G +E + P + + Sbjct: 103 TPIKVQADLIEVKQGDHITCGDIDLEVLETPGHTPGGVCYYME 145 >gi|302784836|ref|XP_002974190.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii] gi|300158522|gb|EFJ25145.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii] Length = 415 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 109/329 (33%), Gaps = 24/329 (7%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER----VSKKIPCISFQ 124 A F+TH H DH L W P+Y S LL A+ + + Sbjct: 15 DAYFLTHLHADHTEGLSADW--CRGPLYCSQVTAMLLLARFKGFNPALLHILDLGTPTLV 72 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + + + ++ +H P + V G ++HTGD++ ++D + + Sbjct: 73 SSNNAADSLLEVTAIDADH-CPGAVMYVFHGEFGCVLHTGDFRWNNDRCTLEERKEALRE 131 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 AIG + L D+T S + ++++ +V ++ + ++ Sbjct: 132 AIGGAQVDFLYLDNTFCNPLFCFPSRNAAATRVIELIRGHPEKDIVIGID-NLGKEELLL 190 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 IA+ + KI + LK + + + S PR + + E Sbjct: 191 SIAQALETKICVWPQRLKTM----HLLQLPDVFTTDTSITRIRAVPRCSVSTRSLKLLNE 246 Query: 305 PRSALAQLSRG----EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 R L L G + K ++ S + + R + + Sbjct: 247 IRPTLGILPTGCLCLCNPSSGRKPKPKLLCS--------ESCYKSRERTSDNQAADASSR 298 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLV 389 V S H ++ + IRP+ ++ Sbjct: 299 LINVVPYSLHCCFSEARDFVDLIRPKSVL 327 >gi|229075966|ref|ZP_04208942.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] gi|229104891|ref|ZP_04235550.1| Metallo-beta-lactamase [Bacillus cereus Rock3-28] gi|229117758|ref|ZP_04247127.1| Metallo-beta-lactamase [Bacillus cereus Rock1-3] gi|228665735|gb|EEL21208.1| Metallo-beta-lactamase [Bacillus cereus Rock1-3] gi|228678521|gb|EEL32739.1| Metallo-beta-lactamase [Bacillus cereus Rock3-28] gi|228707281|gb|EEL59478.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] Length = 239 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDGTVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + VG+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTVGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|225017607|ref|ZP_03706799.1| hypothetical protein CLOSTMETH_01535 [Clostridium methylpentosum DSM 5476] gi|224949572|gb|EEG30781.1| hypothetical protein CLOSTMETH_01535 [Clostridium methylpentosum DSM 5476] Length = 264 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 50/151 (33%), Gaps = 24/151 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFIMKERKNLMAIFIT 74 N G G I++D G+ L G+D + + AIF+T Sbjct: 14 GNCTYIGDGKQG----ILVDAGIGIRNYTNSLALAGID------------PRGVQAIFVT 57 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L + +PVY S LLE + V + V +G F Sbjct: 58 HEHSDHISGLRKISERFSLPVYGSRGT--LLEI-LKKDAVGEDTVLYEINKKSAV-IGDF 113 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + H E++ + + D Sbjct: 114 EVTAFHTPHDSAESLGFSVTDGKKKVSICTD 144 >gi|225850137|ref|YP_002730371.1| metallo-beta-lactamase family protein [Persephonella marina EX-H1] gi|225645326|gb|ACO03512.1| metallo-beta-lactamase family protein [Persephonella marina EX-H1] Length = 468 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 72/483 (14%), Positives = 141/483 (29%), Gaps = 78/483 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E++ G + + L G I++DCG+ D+ D D Sbjct: 3 EKITVQSFGAAKTVTGSCHLITAGKLK----ILVDCGLFQGIDEERNYDPFLFDP----- 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERV 114 K++ + +THAH DH G + L + ++ + RV Sbjct: 54 --KDIDYLIVTHAHLDHIGRIPLLVKNGFRGKIISTKPTRIISRIMLLDAAKVMEEEYRV 111 Query: 115 SKKIPCI----------------SFQAGDKVDV-----------GAFSIESVRVNHSIPE 147 + ++A + + + I H I Sbjct: 112 EYRKALRRGEPEKVKPPLFDEDDVYEAMEHFRIQLEYDQPLKLTESIRIRFKNAGH-ILG 170 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + + I + V T + D + D + G + +ST R+ Sbjct: 171 SAYVQIDIDTVSGVKTLIFSGDLGLKERLIIDPLTFSDRGE----YIFVESTYGNRKHRS 226 Query: 208 ISEK--GIKKNIYDIMKNAKGCVLVTTFSSS-------VSRIRSIIDIAEQIGRKI-VLL 257 + E +K I + ++ G +++ TF+ V R+ + + L Sbjct: 227 LEESIDEFEKAIVESFEDG-GNIVIPTFALERSQEILFVLRMMYDQGRLPKCKIFLDSPL 285 Query: 258 GSSLKRVVSVA-------IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 S ++ + I K + F+ E+ +I + G A + Sbjct: 286 AISATKIFLQFPEYFNSDLKDMIRKGENPFIFPYVHFTQTVEESKMINSIDNGAIILAGS 345 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVHV 367 + G L SS G + I + + + + ++ Sbjct: 346 GMCTGGRIKHHLKHNLWRPESSVIFVGYQAKGTLGRRIIDGAEKVKIYGEEIAVKARIYT 405 Query: 368 ----SGHPYPNDLKRMYQWIRP-QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 S H L + + + + IHGEP L +E QE V G+ + Sbjct: 406 INGFSSHADKPVLIEWLKNFKNRKNIFLIHGEPEVLEIFRENINQELKIRSHIVEFGEKI 465 Query: 423 RLF 425 + Sbjct: 466 YIN 468 >gi|187735380|ref|YP_001877492.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425432|gb|ACD04711.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 261 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 26/194 (13%) Query: 56 PDIT--FIMKERKNLMAIFITHAHEDHYGAL----HDLWSF-LHVPVYASPFAIGLLEAK 108 PD+ + + ++ A+ THAH DH G W +P+YASP + L Sbjct: 57 PDLRQQALRENITDVDAVLYTHAHVDHVGGFDDLRAFCWRRSGGLPMYASPMTVDALRTM 116 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSI-----ESVRVNHSIPETMALVIRSPVGNIVHT 163 + V K + F + + V H+ ET A ++ + ++V+ Sbjct: 117 YGWAFVPKPGRSGYVRPEPHEVTAPFRVGNMLATPLPVLHAGVETYAYLLEAGGRSLVYM 176 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D K + + +G+ L+ D R + +++ + I Sbjct: 177 PDVKSIPAPS------LERM-----KGVDLLIIDGL---RYHLHPTHMCLEETLAAIAAV 222 Query: 224 AKGCVLVTTFSSSV 237 ++T S + Sbjct: 223 RPRRAVLTHLSHDM 236 >gi|168214144|ref|ZP_02639769.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|168215561|ref|ZP_02641186.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|170714347|gb|EDT26529.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|182382085|gb|EDT79564.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 206 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIESVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLSEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDMLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGVCFLIDN----CLFTGD 142 >gi|55821167|ref|YP_139609.1| hypothetical protein stu1158 [Streptococcus thermophilus LMG 18311] gi|55737152|gb|AAV60794.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 276 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + K I++D G+ + + +I ++ +L AI +TH H+DH + Sbjct: 26 SFYLETPEKKILVDAGL-----SGKKITSLLAEID---RDPSDLDAILVTHEHKDHIHGV 77 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ ++++K F G + G IES V+H Sbjct: 78 GVLARKYGMDIYANEKTWQIMDSK-NMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHD 136 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A L + D Sbjct: 137 AINPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENAD 173 >gi|302872386|ref|YP_003841022.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302575245|gb|ADL43036.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 198 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 32/190 (16%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATKIESII------VENDLIPRAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAG 126 +TH H DH+ L +PVYA +L + ++ F+ G Sbjct: 51 LTHGHFDHFLGCCYLRQRFKLPVYAHRAEKEILSNPAYNLSYLIGSKIKINCDGY-FEDG 109 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT--DKDSLC 184 D + FS++ + P + + NI+ +GD D D+ D+ + Sbjct: 110 DVFEFADFSLKVLHTPGHTPGSSCFL----YDNILFSGDTLFKDSFGRCDLPLGDESQIF 165 Query: 185 AIGNEGILAL 194 E +L L Sbjct: 166 KSIKEKLLVL 175 >gi|227509354|ref|ZP_03939403.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191066|gb|EEI71133.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 251 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 86/270 (31%), Gaps = 55/270 (20%) Query: 11 LGG--VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK-- 66 LGG G + L G+ +IDCG + + + + Sbjct: 14 LGGYPANGNGTSSYLLESGNFH----FLIDCGSA--------------ALLSLEEILDPL 55 Query: 67 NLMAIFITHAHEDH---YGALHDLW----SFLH---VPVYASPFAIGLLEAKRVYERV-- 114 L A+ +TH H DH G L W +P+Y K ++ + Sbjct: 56 KLDALILTHYHHDHTADVGVLQYYWQLHEKRYDQKCLPIYGHTL------DKINFDGLSW 109 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDDA 172 +++ ++DVG FSI +++H +P L I +V T D A Sbjct: 110 PDSTKGVAYDPEKQLDVGPFSITFFKMHHPVP-AFGLRITEKATGKVLVFTAD-----TA 163 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 ++ L + + A + GT + AK +L Sbjct: 164 YFPEIAYFARNAD------LLMTDTNFYADKTGTKWHMTSTESGQLAKDAEAKRLLLTHL 217 Query: 233 F-SSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 +++++ + A G I + L Sbjct: 218 PAYGDLNQLKQEAETAAGSGIPIDVASRHL 247 >gi|229031910|ref|ZP_04187897.1| Metallo-beta-lactamase [Bacillus cereus AH1271] gi|228729374|gb|EEL80364.1| Metallo-beta-lactamase [Bacillus cereus AH1271] Length = 239 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 139 HIIDAEGALAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 184 >gi|218247991|ref|YP_002373362.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801] gi|218168469|gb|ACK67206.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801] Length = 549 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 141/382 (36%), Gaps = 29/382 (7%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY-GALHDLWSFLH 92 I++DCG+S + P V P + +F +HAH DH G L +F Sbjct: 39 RILLDCGLS---NLTPLVSQAQP----------PVDMVFCSHAHADHARGLLALHQAFRD 85 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMAL 151 +P+YAS LL E S+ C + +++ ++E R H +P A+ Sbjct: 86 LPIYASEVTAQLLPLNWPKEPSSETSFCQPLKWRSPLEIDENLTVELFRAGH-LPGASAI 144 Query: 152 VIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 ++ +++TGD+ L + ++ ++ ++L + + IL + Sbjct: 145 LLSYQTPQRTYKLLYTGDFSLSNLQLVEGLS-VEALRGLSPD-ILIIEGSYGTGRHPHRR 202 Query: 208 ISEKGIKKNIYDIMKNAKGCVL-VTT--FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 EK + + IY+ + + +L V T + ++ I + G+ + + Sbjct: 203 QQEKHLMQRIYEALSVGQSVLLPVPTLGLGQEILKLLRSHHQFTGRDLDIWVDGN-VAKA 261 Query: 265 VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ--LSRGEMRNVKL 322 + +++ + + L+ E++ + R L Q V L Sbjct: 262 CDIYLELLAEFPPSVQNFAKHQSLFWDERICPRLRRLTPQQRGTLGQTPCIVLTDNLVHL 321 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 ++ ++ S I E + + + ++ H + ++ Sbjct: 322 HDEGFLMLGSWLILMPEHEGLR-PDSPEILALNQLPLIHLDTYLLAEHSDGRNTTQLIHN 380 Query: 383 IRPQVLVAIHGEPLHLVAHKEL 404 +RPQ ++ +HG P+ L L Sbjct: 381 LRPQHIIFVHGSPMDLADLTNL 402 >gi|182624403|ref|ZP_02952187.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177910406|gb|EDT72783.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 206 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIESVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLSEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDMLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|229186502|ref|ZP_04313664.1| Metallo-beta-lactamase [Bacillus cereus BGSC 6E1] gi|228596933|gb|EEK54591.1| Metallo-beta-lactamase [Bacillus cereus BGSC 6E1] Length = 221 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 18 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A K+ +G+F+ E P +++ N V +GD Sbjct: 121 HIIDAEGKLAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 166 >gi|18310918|ref|NP_562852.1| metallo-beta-lactamase family protein [Clostridium perfringens str. 13] gi|18145600|dbj|BAB81642.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 206 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ IM+D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIMVD-----PGEEASRIENVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|255530019|ref|YP_003090391.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343003|gb|ACU02329.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 465 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 123/454 (27%), Gaps = 79/454 (17%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHV 93 I++DCG+ F D + F + + ++HAH DH G L L + Sbjct: 27 ILLDCGL-FQGMGDL-TDGLNESFGF---NPAKVTYMILSHAHIDHCGLLPRLVAEGFRG 81 Query: 94 PVYASPFAIGLLEAKRVY---------ERVSKKIPCISFQAG------------------ 126 PVY +P L + E +KKI + Q Sbjct: 82 PVYCTPATRNLARILLLDSAKIQMQDAEYANKKIRRVEDQEMPLYTDKDVEQTLSQFKTI 141 Query: 127 ---DKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ ++ H I + A+ ++ + D +G D Sbjct: 142 PYDQDFNIDPDVTLRFTDAGH-IVGSAAVHLQLHENGTTTRITFSGD----VGRYGDLLL 196 Query: 183 LCAIGNEGILALMCDSTNAMREGT--CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 ++ +ST E + + I KG V++ FS V R Sbjct: 197 KSPQTFPQADYILMESTYGDSLHADLDPIEDMLLQVITRTCIEKKGKVIIPAFS--VGRT 254 Query: 241 RSIIDIAE----QIGRKIVLLG----SSLKRVVSVAIDVGIIKKDQLFLSDESFG----- 287 + ++ + + S++ + + + Sbjct: 255 QELLYALNGLELKNKLPEIPYYVDSPLSMEATEVLRSHPEVYNNGVKEILKVDQDIFGFK 314 Query: 288 --------------LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSR 333 ++I++ E + K V ++S Sbjct: 315 GLRFIESVEESKALNVDMHPCVIISSSGMAEGGRVRHHIRNNISD--KKNTILMVGYASP 372 Query: 334 AIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRP---QVLVA 390 + G + L Q VIAE +S H DL + P + L Sbjct: 373 DSLAGRLMAGQKRVWLFGQEYDVIAEVG-AIKSMSAHGDYEDLLQFLSVQDPAKVKRLFL 431 Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 +HGE + + G V + L Sbjct: 432 VHGEYEVQQKFAQRIINAGFKNVSIPEYHQEFEL 465 >gi|210612534|ref|ZP_03289352.1| hypothetical protein CLONEX_01554 [Clostridium nexile DSM 1787] gi|210151539|gb|EEA82546.1| hypothetical protein CLONEX_01554 [Clostridium nexile DSM 1787] Length = 265 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 13/143 (9%) Query: 25 GYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 + S + ++ID G+S ++ L + + + + L I ITH H DH Sbjct: 14 CIYAGSDKTHLLIDTGISKKRIEEGLHEIGI----------KGEELGGILITHEHSDHIQ 63 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 L +P+YA+ I ++A + +G I ++ Sbjct: 64 GLGVFSRKYEIPIYATRGTIEGIKAY-KGIGKMPEGLLKEVTVDQMFSIGNLDIRPFAIS 122 Query: 143 HSIPETMALVIRSPVGNIVHTGD 165 H E I ++ D Sbjct: 123 HDANEPSGFRIEHDGKSLAVATD 145 >gi|118479436|ref|YP_896587.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|118418661|gb|ABK87080.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] Length = 239 Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVREAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A K+ +G+F+ E P +++ N V +GD Sbjct: 139 HIIDAEGKLAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 184 >gi|196035030|ref|ZP_03102437.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|218905397|ref|YP_002453231.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|254721855|ref|ZP_05183644.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|195992569|gb|EDX56530.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|218535728|gb|ACK88126.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 209 Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 109 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 154 >gi|160933971|ref|ZP_02081358.1| hypothetical protein CLOLEP_02833 [Clostridium leptum DSM 753] gi|156866644|gb|EDO60016.1| hypothetical protein CLOLEP_02833 [Clostridium leptum DSM 753] Length = 539 Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 17/111 (15%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFI 61 + +L F LG E+ + L + I+IDCG+ P + V P Sbjct: 7 SMKLTF--LGAAHEVTGSCYLLEACGKT----ILIDCGMEQGPDEYENQEIPVSP----- 55 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 ++ + +THAH DH G L L++ ++A+ L + Sbjct: 56 ----SSIDWVLLTHAHIDHSGRLPLLYAHGFRGKIFATGATCDLCDIMLRD 102 >gi|260809984|ref|XP_002599784.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae] gi|229285066|gb|EEN55796.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae] Length = 319 Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 50/323 (15%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W P+Y S LL K + D+ Sbjct: 28 FLTHMHADHTSGLSPSWKH---PIYCSEITAKLLIHKFDIAPALVHTLEVGESRMLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++ NH P + + + G+I +TGD++ ++ D + L + Sbjct: 85 TGQETMTVTVFDANH-CPGAVMFLFQGYFGSIFYTGDFRYSP-----EMFDHEVLANRPS 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+T E S + I DI+ +V + + + ++++A+ Sbjct: 139 --IDVLYLDNTYCSPECKFPSRAQATQMIKDIISRHPEHDIVLGMTM-LGKEDMLVELAK 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 +V+ L+ + +++ +F +D G I + Sbjct: 196 TFQTWVVVTPQRLE-------TLKLLELPNVFTTDPEAGRIRVALKYQITRKNMERW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 E + + N+ + + S Sbjct: 246 -----NQERPTIAILPSALYTGLDGKPYANQPDVHIVP--------------------YS 280 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H +L ++P+ ++ + Sbjct: 281 DHSSNGELHDFVSRLKPRSIIPV 303 >gi|281490937|ref|YP_003352917.1| beta-lactamase superfamily Zn-dependent hydrolase [Lactococcus lactis subsp. lactis KF147] gi|281374695|gb|ADA64215.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] Length = 270 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 11/172 (6%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K + ++ I ++ ++ A+ ITH H DH + Sbjct: 20 SFYLETPKKKILVDAGLSGKKIESL--------LSEIDRDIHDIDALLITHEHSDHIKGI 71 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ L++K ++ F+ G + G IES V+H Sbjct: 72 GVLARKYGIDLYANEDTWCELDSKNALGKI-PVEQKHLFEMGKTMTFGDIDIESFGVSHD 130 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + V D + D + D + + + IL + Sbjct: 131 AIAPQFYRFMKDNKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEILRM 182 >gi|157963049|ref|YP_001503083.1| beta-lactamase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848049|gb|ABV88548.1| beta-lactamase domain protein [Shewanella pealeana ATCC 700345] Length = 489 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 100/345 (28%), Gaps = 69/345 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ V + + A Sbjct: 8 LGATQEVTGSCHLL----TIDGRQVLLDCGLIQGSKAD-----VLRNHEPFAFTPSQIHA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKK--- 117 + ++HAH DH G L L P+Y+ + L ER++KK Sbjct: 59 VVLSHAHIDHSGRLPLLVKSGFTGPIYSHKATVELCGVMLKDAAMLQARDTERLNKKRAK 118 Query: 118 -------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 + ++ G+ +V + I + + + G Sbjct: 119 NDLPLLDPLFDEADVERVMLQFVALDYGENKEVAPHLKVCLSDAGHILGSAVVELWLGEG 178 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKN 216 + + D + D + ++ +ST R + + ++ Sbjct: 179 SETKKLVFSGDLGREGMPILDDPTFIDSA----DLVLMESTYGDRLHRSWDDTLEELRAI 234 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 ++ ++G +L+ FS V R + ++ + Sbjct: 235 FARTIEQSRGNILLPAFS--VGRAQELLYLFHLY--------------------AKEWDL 272 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + +S Q+ V G E +S G+ + Sbjct: 273 SRWRICLDSPMAIKATQIYVDNYGLMDEDFKRFTHMSPGKHPLLS 317 >gi|77408372|ref|ZP_00785113.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|77413062|ref|ZP_00789263.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77160855|gb|EAO71965.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77173053|gb|EAO76181.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|319744746|gb|EFV97088.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 269 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NCFYIE----TPQKRLLIDAGLTGKKVTSLLAE--------INRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H DH + L H+ +YA+ +++ + F Sbjct: 51 PEDLDAILVTHEHSDHIKGVGVLARKYHLDIYANEQTWKVMDER-NMLGKVDVSQKHVFG 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G + G IES V+H + + + V D + D A L + D Sbjct: 110 RGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMASLIENAD 166 >gi|302386266|ref|YP_003822088.1| ribonuclease Z [Clostridium saccharolyticum WM1] gi|302196894|gb|ADL04465.1| ribonuclease Z [Clostridium saccharolyticum WM1] Length = 265 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 14/153 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S I++D G+S + + I + L I ITH H Sbjct: 12 GNCIYVG----SDTTHILVDAGISN--------KRIQQGLNEIGLKGSELTGIVITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L VP+Y + + + +K+ Y + + VG ++ Sbjct: 60 DHTKGLGVLARKYGVPIYGTRETLDEI-SKQKYLGEYPRELFHAVSPDVDFCVGDLEVKP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDW-KLDD 170 ++H +A I+ ++ D D Sbjct: 119 FSIDHDASNPVAYRIQHGHKSVAVATDMGHYDQ 151 >gi|229157873|ref|ZP_04285948.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] gi|228625830|gb|EEK82582.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] Length = 239 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 139 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 184 >gi|17545866|ref|NP_519268.1| hypothetical protein RSc1147 [Ralstonia solanacearum GMI1000] gi|17428160|emb|CAD14849.1| probable metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum GMI1000] Length = 261 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 24/183 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G N L ++ I++DCG G+ + + Sbjct: 3 VRFASLGSGSD---GNALLVESTDGTTSTRILLDCG--------FGIRETVRRLERLGCA 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPC 120 +L AI +TH H DH G+ + + VPV+ S L R + + Sbjct: 52 PASLDAILVTHEHGDHIGSAYAFAAKYSVPVWTSHGTYRATASL--------RGADRAAV 103 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 +A D +G I V H E + + + D + + + G +T Sbjct: 104 RFCRADDAFSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGL 163 Query: 181 DSL 183 + Sbjct: 164 HAF 166 >gi|189465786|ref|ZP_03014571.1| hypothetical protein BACINT_02147 [Bacteroides intestinalis DSM 17393] gi|224539880|ref|ZP_03680419.1| hypothetical protein BACCELL_04791 [Bacteroides cellulosilyticus DSM 14838] gi|189434050|gb|EDV03035.1| hypothetical protein BACINT_02147 [Bacteroides intestinalis DSM 17393] gi|224518496|gb|EEF87601.1| hypothetical protein BACCELL_04791 [Bacteroides cellulosilyticus DSM 14838] Length = 267 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + + Sbjct: 1 MKVKFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKSLKEV 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + + A+F+TH H DH A+ L LH+PVY + E +++K+ Sbjct: 45 GVGMETIRAVFVTHDHADHIKAVGGLGEKLHIPVYT---TARIHEGINKSYCMTEKLHSS 101 Query: 122 SF--QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + F IES V H + + I D Sbjct: 102 VHYLEKEEPMVLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|121533964|ref|ZP_01665790.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] gi|121307475|gb|EAX48391.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] Length = 260 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 18/152 (11%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDI-TFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 I++D G+ + I T + + + AI +TH H DH L L Sbjct: 20 DTTKILVDAGI-----SARRIQQALCGIGTSLEE----VDAILVTHEHRDHVSGLPTLTR 70 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVY P E E + ++ GD +++G IE+ ++H + + Sbjct: 71 RYGLPVYTRPGTW---ENMFCRELIP---SACCYELGDSLEIGNVKIEAFSISHDAADPV 124 Query: 150 ALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 D + D +D Sbjct: 125 GFNFYYRNRKYSVATDLGFVTDSVKKAIACSD 156 >gi|229174936|ref|ZP_04302456.1| Metallo-beta-lactamase [Bacillus cereus MM3] gi|228608604|gb|EEK65906.1| Metallo-beta-lactamase [Bacillus cereus MM3] Length = 221 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 18 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 121 HIINAEGALAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 166 >gi|110801728|ref|YP_699212.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110682229|gb|ABG85599.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 206 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V I + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIENVI------ESLDAKPKMILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|70952759|ref|XP_745526.1| cleavage and polyadenylation specificity factor protein [Plasmodium chabaudi chabaudi] gi|56525876|emb|CAH78255.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium chabaudi chabaudi] Length = 327 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 95/336 (28%), Gaps = 102/336 (30%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---------------VSFPKD 46 + LG +G + + + IM DCG + + Sbjct: 6 NQTTVYIKVLGAGQTVGRSCVIVE----LENRRIMFDCGSHVGYKDERKYPNFNLLVGNN 61 Query: 47 DLPG------------------VDLVFPDITFIMKERKNL----MAIFITHAHEDHYGAL 84 ++ G V+ D ++ K + + I+H H DH GAL Sbjct: 62 NMEGGPKIDEENNLNVEVNISIVNSNIADKEKLINNLKRINEIIDCVIISHFHMDHIGAL 121 Query: 85 HDLWS--FLHVPVYASPFAIGLL---------------EAKRVYERVS------------ 115 + S L E K + +++ Sbjct: 122 PFFTETLQYKGTIIMSYPTKALSPVLLLDGCKISDQKWEKKNLEKQIKMLNEKSDDLLNY 181 Query: 116 -----KKIPCISFQA--------------GDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 KK P + + ++G SI H + + Sbjct: 182 NINRIKKDPWNITEENIYNCMNKVVGLQVNETYELGDISITPYYAGH-VLGACMYRLEVN 240 Query: 157 VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIK 214 ++++TGD+ D LG I + +ST A R SE + Sbjct: 241 NVSVIYTGDYNTIPDKHLGS-------TKIPVLTPEIFISESTYASYVRPTRKSSELELC 293 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 N+ + + G VL+ F+ + R + + + E+ Sbjct: 294 -NLVNECVHKGGKVLIPVFA--IGRAQELSILLEEY 326 >gi|25010798|ref|NP_735193.1| hypothetical protein gbs0743 [Streptococcus agalactiae NEM316] gi|77410774|ref|ZP_00787132.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|23095152|emb|CAD46387.1| Unknown [Streptococcus agalactiae NEM316] gi|77163153|gb|EAO74106.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] Length = 269 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NCFYIE----TPQKRLLIDAGLTGKKVTSLLAE--------INRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H DH + L H+ +YA+ +++ + F Sbjct: 51 PEDLDAILVTHEHSDHIKGVGVLARKYHLDIYANEQTWKVMDER-NMLGKVDVSQKHVFG 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G + G IES V+H + + + V D + D A L + D Sbjct: 110 RGTTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMASLIENAD 166 >gi|325474013|gb|EGC77201.1| metallo-beta-lactamase [Treponema denticola F0402] Length = 470 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 71/492 (14%), Positives = 137/492 (27%), Gaps = 96/492 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 + F LG E+ + + +IDCG + D D P Sbjct: 3 IKFYSLGAAEEVTGS----KHILEVDGHKYLIDCGAFQGKRAEADKKNRDFNVPAPE--- 55 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVY 111 L A+ +TH H DH G L L +YA+P + ++A+ Sbjct: 56 -----LEAVILTHGHYDHCGLLPLLGKHGFTGNIYATPATRDIANLVMMDSARIQARDRE 110 Query: 112 ER----------------------VSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPET 148 + ++ +G +E H I + Sbjct: 111 YLSKQAAKKGETFKWVPLFDEADVIQTVNQFVTISYHRPAWIGPNVQLEFYDAGH-ILGS 169 Query: 149 MALVIRSPVGN-----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 VI + + I TGD + + D + ++ +ST R Sbjct: 170 AMAVITAKDSDGKEVKIAFTGDLGR-KNKAIIRDPDI-------IPPVDYIVIESTYGNR 221 Query: 204 EGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKI 254 K + + +I++N KG +++ F+ V R + I+ + I Sbjct: 222 RHEETDNALKLLAEKTQEIVQN-KGKMIIPAFA--VERTQEIVYYFHLLVDKKIIPDIPI 278 Query: 255 VLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS------- 307 + S+ Q + P + S E + Sbjct: 279 YVDSPMAVNATSIFQVHPECYDAQTHEAFLIHHKNPFGFNSLKFITSVAESKELNNIDGP 338 Query: 308 -------ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + + R EK + + ++N+ E + Sbjct: 339 MVIISADGMCEFGRITHHLANNIEKPSTKVLLVGFMAEDTLGRRLQNKEQEVKIFGEWHQ 398 Query: 361 AECPV----HVSGHPYPNDLKRMYQWI-RPQV--LVAIHGEPLHLVAHKELALQEGIACV 413 + S H + + + P++ + +HGEP + + G V Sbjct: 399 VRAEILQINAFSAHADYFESREWLDSLENPKLKTIFLVHGEPKAQTYFTQYLNENGYNDV 458 Query: 414 PPVRNGKMLRLF 425 V+ G+ +L Sbjct: 459 KTVKYGRTYKLD 470 >gi|229140997|ref|ZP_04269540.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST26] gi|229198389|ref|ZP_04325095.1| Metallo-beta-lactamase [Bacillus cereus m1293] gi|228585089|gb|EEK43201.1| Metallo-beta-lactamase [Bacillus cereus m1293] gi|228642430|gb|EEK98718.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST26] Length = 239 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---TNEQNECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 139 HIIDAEGALAIGSFNFEIFETPGHSPGSISYY--CKEANAVFSGDVLF 184 >gi|330808080|ref|YP_004352542.1| hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376188|gb|AEA67538.1| putative hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 252 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 60/183 (32%), Gaps = 30/183 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LG + N L S+ ++++DCG S + + GV Sbjct: 1 MRFAVLGSGSQ--GNGTLV----ASAGTYVLVDCGFSLRETEKRLLRLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L AI +TH H DH + L ++PVY S + L Sbjct: 45 --HPAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSRGTLEGLRKPIEPAGF------- 95 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+++ +G I V V H E V D D ++ D D Sbjct: 96 -VAGGEQLRIGCLDISVVSVAHDAREPTQYVFSDGERRFGLLTDLGSYCDRVMDSYRDLD 154 Query: 182 SLC 184 +L Sbjct: 155 ALM 157 >gi|168063695|ref|XP_001783805.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664687|gb|EDQ51397.1| predicted protein [Physcomitrella patens subsp. patens] Length = 334 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 106/324 (32%), Gaps = 32/324 (9%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 A F+TH H DHYG L WS P++ + L+ + G Sbjct: 20 KAYFLTHFHSDHYGGLTRSWSH--GPIFCTEITARLV----SMHLGVDSHWLRPMKLGCV 73 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 V ++ + NH P ++ ++ I+HTGD++ + ++ Sbjct: 74 SIVEGVKVQFLEANH-CPGAALILFQTSCGQLILHTGDFRACKSMQDYPELLGARITSLY 132 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 + C+ + +K + +N K V V +S + + R + IA Sbjct: 133 ---LDTTYCNPKYNFPLQEDVINHVVKLTSAALSRNPKTLVTVGAYS--IGKERVYLGIA 187 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + + +I + + L S R ++ I+ + + R+ Sbjct: 188 KALSLRIYADKR-------RVRTLRALDWPDLTDRLCSDASSSRLHVLPISHLNATKLRA 240 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 + L + +E ++ ++ V V Sbjct: 241 YMQSLHPTYSAVLAFRPTGWTY--------SEKIGSNLSELKPQRSGVV----TIYGVPY 288 Query: 368 SGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++L+ +++RPQ ++A Sbjct: 289 SEHSSYSELQEFVKFLRPQKVLAT 312 >gi|8778278|gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana] Length = 612 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 123/401 (30%), Gaps = 34/401 (8%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+THAH+DH G + + P+Y++ I LL + + + G V Sbjct: 93 FLTHAHKDHTVGVSP--SNIVVFPIYSTSLTISLL---LQRFPQLDESYFVRVEIGQSVI 147 Query: 131 V----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDS 182 V G F + + NH P + + GNI+HTGD + V Sbjct: 148 VDDPDGEFKVTAFDANH-CPGAVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYVGRSHG 206 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + + G + L C + ++ + I + + N +V + + Sbjct: 207 MKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACDMLGQEDV 266 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVIATG 300 +++++ G KI + + + +I + + S +L + Sbjct: 267 LLEVSRTFGSKIYV---DKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYERTSA 323 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 E RS L + + + + K R V V E Sbjct: 324 KLAEARSKL-----QSEPLIIRPSAQWYVC---DDEDDWKSGSIQKQRKVRFSEAVKDEF 375 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----HGEPLHLVAHKELALQEGIACVPP 415 V S H +L+ Q + P+ +V+ E ++ + ++ Sbjct: 376 GLWHVCYSMHSSRAELESAMQLLSPKWVVSTVPSCRAMELNYVKKNCFISRFSPDDPFWK 435 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA 456 + + + P V L +I + Sbjct: 436 LLDID-MEASPVAAADTQTVALSCCLMSEQIILDSGKSKLE 475 >gi|291570139|dbj|BAI92411.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 513 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 63/396 (15%), Positives = 131/396 (33%), Gaps = 59/396 (14%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA--IFITHAHEDHYGALHDLWSF-L 91 +++DCG+ DI+ ++K + +A + +HAH DH L L Sbjct: 6 VLLDCGLR--------------DISPLLKSSEGCVADLVICSHAHADHVRGLLALHESCP 51 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG---DKVDVGAFSIESVRVNHSIPET 148 +P+YAS LL + S +IP + SI H +P Sbjct: 52 DLPIYASDVTSQLLPLNWPEQLSSGQIPQFCQPLPLRTEVRLKEGLSITLFPAGH-LPGA 110 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 ++++ + +TGD+ L + ++ + L + + +L L A Sbjct: 111 TCMLLKYNAPHRTYKLFYTGDFFLSNSRLVEGLP-LGELRGLRPD-VLILEGSYGTARYP 168 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 E + + IY + + V++ T + + + ++ + G + Sbjct: 169 HRRQLENQLAERIYRAIA-SGYSVIIPTPALGLGQELLMLLRSHHY-----FTGRDIDIW 222 Query: 265 VSVAIDVGI------IKKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSR-- 314 V + G + + + + E++ E L Q Sbjct: 223 VDGQVQTGCDIYLELLPHFPANIQNFAQHQPLFWDERIKPRVRRLSPELLPELEQCPSIV 282 Query: 315 ------GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + ++ + +F S PG+ I + N E ++ Sbjct: 283 IVDDGTDIEQYLRYRPRLWTLFLSE-TPGHTREISALVN---------SGEILLESYFLA 332 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL 404 H ++ +RPQ ++ +HG P++L L Sbjct: 333 EHCDGPGTTQLIHNLRPQHVIFVHGSPIYLADLTNL 368 >gi|284050552|ref|ZP_06380762.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca] Length = 536 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 63/396 (15%), Positives = 131/396 (33%), Gaps = 59/396 (14%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA--IFITHAHEDHYGALHDLWSF-L 91 +++DCG+ DI+ ++K + +A + +HAH DH L L Sbjct: 29 VLLDCGLR--------------DISPLLKSSEGCVADLVICSHAHADHVRGLLALHESCP 74 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG---DKVDVGAFSIESVRVNHSIPET 148 +P+YAS LL + S +IP + SI H +P Sbjct: 75 DLPIYASDVTSQLLPLNWPEQLSSGQIPQFCQPLPLRTEVRLKEGLSITLFPAGH-LPGA 133 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 ++++ + +TGD+ L + ++ + L + + +L L A Sbjct: 134 TCMLLKYNAPHRTYKLFYTGDFFLSNSRLVEGLP-LGELRGLRPD-VLILEGSYGTARYP 191 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRV 264 E + + IY + + V++ T + + + ++ + G + Sbjct: 192 HRRQLENQLAERIYRAIA-SGYSVIIPTPALGLGQELLMLLRSHHY-----FTGRDIDIW 245 Query: 265 VSVAIDVGI------IKKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSR-- 314 V + G + + + + E++ E L Q Sbjct: 246 VDGQVQTGCDIYLELLPHFPANIQNFAQHQPLFWDERIKPRVRRLSPELLPELEQCPSIV 305 Query: 315 ------GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + ++ + +F S PG+ I + N E ++ Sbjct: 306 IVDDGTDIEQYLRYRPRLWTLFLSE-TPGHTREISALVN---------SGEILLESYFLA 355 Query: 369 GHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL 404 H ++ +RPQ ++ +HG P++L L Sbjct: 356 EHCDGPGTTQLIHNLRPQHVIFVHGSPIYLADLTNL 391 >gi|228993006|ref|ZP_04152929.1| Metallo-beta-lactamase [Bacillus pseudomycoides DSM 12442] gi|228999056|ref|ZP_04158638.1| Metallo-beta-lactamase [Bacillus mycoides Rock3-17] gi|229006604|ref|ZP_04164239.1| Metallo-beta-lactamase [Bacillus mycoides Rock1-4] gi|228754653|gb|EEM04063.1| Metallo-beta-lactamase [Bacillus mycoides Rock1-4] gi|228760673|gb|EEM09637.1| Metallo-beta-lactamase [Bacillus mycoides Rock3-17] gi|228766654|gb|EEM15294.1| Metallo-beta-lactamase [Bacillus pseudomycoides DSM 12442] Length = 209 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYILS---NDQKECIIFDPGSE-------GEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEVDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + +G+F+ E P +++ N V +GD Sbjct: 109 QIIEGEGMLTIGSFTFEMFETPGHSPGSISYY--CKEANAVFSGDVLF 154 >gi|327480128|gb|AEA83438.1| metallo-beta-lactamase superfamily protein [Pseudomonas stutzeri DSM 4166] Length = 469 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 61/280 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + ++ + L ++++CG+ + + + K+L A Sbjct: 7 LGAIQQVTGSCYLIE---THDGARVLLECGMHQGRREEESDNRAAFAFD-----PKSLDA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERVSKKIPCI 121 + ++HAH DH G L L + PV+ + LLE K Sbjct: 59 VVLSHAHIDHSGLLPRLVALGYRGPVHCTEATAELLELMLLDSAQIQEKDAEWENKWRAR 118 Query: 122 SFQAG------------------------DKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 + ++ H I + + + Sbjct: 119 IGKPMVQPLYTRVDAERTLGQRAPHPYGETFEVARGVAVTFHNAGH-ILGSSIVQMDVHD 177 Query: 158 G----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 +V +GD ++ T + ++ +ST R+ S + Sbjct: 178 HGRTRRLVFSGDLGNVCSPLMPAPTVL--------KEADVVLMESTYGDRDHR--SHEDT 227 Query: 214 KKNIYDIMKNAK---GCVLVTTFSSSVSRIRSIIDIAEQI 250 + + I++ A G VL+ +F+ V R + +I + Sbjct: 228 IEELAGILQQAHRDGGNVLMPSFA--VGRTQDLIYYLGRF 265 >gi|302671644|ref|YP_003831604.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] gi|302396117|gb|ADL35022.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] Length = 534 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 76/502 (15%), Positives = 148/502 (29%), Gaps = 106/502 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF--PDITFI 61 +L F+ G E+ + + I++D G+ KD V L P+I + Sbjct: 1 MKLTFI--GADHEVTGSCHFIEACGKN----ILVDYGMEQGKDYFENVSLPVSAPEIDY- 53 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL---------------L 105 +F+THAH DH G L L+S +Y++ L Sbjct: 54 ---------VFLTHAHVDHSGNLPLLYSKGFRGKIYSTDATADLCNIMLRDCAHIQMQEA 104 Query: 106 EAKRVYERVSKKIPCISFQA------------------GDKVDVGAFSIESVRVNHSIPE 147 E + + S+ I I + I + H + Sbjct: 105 EWRNRKAKRSRDIAQIEPAYTMEDAEKTIKAFVPCGYNQEIEVCEGVKIRFTDIGH-LLG 163 Query: 148 TMALVIRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + ++ I N+ V +GD ++ D ++ +ST R Sbjct: 164 SSSIEIWLTEKNVTKKLVFSGDIGNKQQPLIR---DPQ-----PTHDADYVVMESTYGDR 215 Query: 204 EGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 ++ I D G V++ +F+ V R + ++ +I + ++ Sbjct: 216 LHATEKPDYVRDLARILDATFQRGGNVVIPSFA--VGRTQEMLYFIRKIKLEGLVKS--- 270 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNV 320 V +D + + D + Y E + ++ L ++ E R + Sbjct: 271 NPNFPVFVDSPLAVEATEIFEDHQYECYDEEAMELVKKRVNPVTFPGLNLAITTEESRAI 330 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA---------------------- 358 + VI S+ + H+K+ L + ++ Sbjct: 331 NEDPEPKVIISASGMCEAGRIRHHLKHNLWREECTILFVGYQSIGTTGRAIIDGADQIKL 390 Query: 359 --------EDAECPVHVSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQ 407 +SGH N L + RP + +HGE + + + Sbjct: 391 FGETIDIKAQICKLEGLSGHADKNGLIDWLKGFDVKRPDRVFIVHGEDSVCTSFAQCLRE 450 Query: 408 EGIACVPPVRNGKMLRLFPDPI 429 E +G + I Sbjct: 451 EYGYNTYAPYSGTEFDIISGQI 472 >gi|323705151|ref|ZP_08116727.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535577|gb|EGB25352.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 647 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 44/180 (24%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-------GVDLVFPDITFIMKE 64 GG G + L Y +++DCG++F D + G+D+ Sbjct: 251 GGT---GGSSYLITY----DDVNVLLDCGINFKDDHIYYENLKKIGIDI----------- 292 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR-------------V 110 K++ + ITH H DH G + +L L+ P+ S +L Sbjct: 293 -KDIDLLIITHCHLDHCGGIVNLIKSGLNCPIIMSYETKYILNGFFSKNSNMQDLNLNDA 351 Query: 111 YERVSKKIPCISFQAG---DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 ++ KI ++ + V ++ + H I + ++ +TGD+ Sbjct: 352 DYKLLNKINSMTLTDCLFDESVKGKRVLVKLIPSGH-ILGACGVYAEIGGFSVFYTGDFT 410 >gi|297584589|ref|YP_003700369.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297143046|gb|ADH99803.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 220 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 23/195 (11%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 G+ + + IMID P D V+ + D + L I++THAH DH GA+ Sbjct: 23 GFILKNDGQAIMID-----PGGDADRVNTLL-DSESLT-----LKEIWLTHAHFDHIGAV 71 Query: 85 HDLWSFLHVPVY--------ASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 DL PVY + ++ E+ + + + + G F Sbjct: 72 QDLRERWKCPVYLHDAEREWLTNPSLNGSGLFMGIEKTAAEPADVLIKEEGSFGSGDFRC 131 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL 194 E P +++ P N++ +GD ++ D ++L + E L+L Sbjct: 132 ELFHTPGHSPGSVSFYF--PEANVIFSGDVLFRGGVGRTDLPGGDHETLLRVIEEKFLSL 189 Query: 195 MCDSTNAMREGTCIS 209 +T A G + Sbjct: 190 PDGTTVANGHGPITT 204 >gi|115894638|ref|XP_796109.2| PREDICTED: similar to cleavage and polyadenylation specificity factor 3, partial [Strongylocentrotus purpuratus] gi|115936389|ref|XP_001180204.1| PREDICTED: similar to cleavage and polyadenylation specificity factor 3, partial [Strongylocentrotus purpuratus] Length = 165 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 50/179 (27%), Gaps = 33/179 (18%) Query: 37 IDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS--FLHVP 94 +DCG+ ++ + P I + + + ++H H DH G L Sbjct: 1 LDCGIHPGREGM----DSLPYFDLID--PEEIDLLLVSHFHLDHCGGLPYFLKNTQFRGR 54 Query: 95 VYASPFAIGLLEAKRVYERVSKKI-----------------PCISFQAGDKVDVGAFSIE 137 V+ + + + + + +VD+ Sbjct: 55 VFMTHASKAIYRWNLSDYVKVSNLSAERMLYTDADLQASMDRIETVNFHQEVDINGIRFS 114 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 H + +I I++TGD+ +D L I N L+ Sbjct: 115 CYHAGH-VLGACMFLIEIAGVKILYTGDFSRQEDRHLMQ-------AEIPNVKPDILIT 165 >gi|21554701|gb|AAM63664.1| unknown [Arabidopsis thaliana] Length = 545 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 123/401 (30%), Gaps = 34/401 (8%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+THAH+DH G + + P+Y++ I LL + + + G V Sbjct: 26 FLTHAHKDHTVGVSP--SNIVVFPIYSTSLTISLL---LQRFPQLDESYFVRVEIGQSVI 80 Query: 131 V----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDS 182 V G F + + NH P + + GNI+HTGD + V Sbjct: 81 VDDPDGEFKVTAFDANH-CPGAVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYVGRSHG 139 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + + G + L C + ++ + I + + N +V + + Sbjct: 140 MKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACDMLGQEDV 199 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVIATG 300 +++++ G KI + + + +I + + S +L + Sbjct: 200 LLEVSRTFGSKIYV---DKATNLECFRSLMVIVPEIVSEDPSSKFHIFSGFPKLYERTSA 256 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 E RS L + + + + K R V V E Sbjct: 257 KLAEARSKL-----QSEPLIIRPSAQWYVC---DDEDDWKSGSIQKQRKVRFSEAVKDEF 308 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----HGEPLHLVAHKELALQEGIACVPP 415 V S H +L+ Q + P+ +V+ E ++ + ++ Sbjct: 309 GLWHVCYSMHSSRAELESAMQLLSPKWVVSTVPSCRAMELNYVKKNCFISRFSPDDPFWK 368 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA 456 + + + P V L +I + Sbjct: 369 LLDID-MEASPVAAADTQTVALSCCLMSEQIILDSGKSKLE 408 >gi|218134096|ref|ZP_03462900.1| hypothetical protein BACPEC_01986 [Bacteroides pectinophilus ATCC 43243] gi|217991471|gb|EEC57477.1| hypothetical protein BACPEC_01986 [Bacteroides pectinophilus ATCC 43243] Length = 535 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 64/525 (12%), Positives = 144/525 (27%), Gaps = 90/525 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + + I++DCG+ D +L P Sbjct: 1 MRLTFLGADHEVTGSCHYLQACGKN----ILVDCGMEQGNDVYENQELPIP--------A 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY--ERVSKKIPCIS 122 ++ + +THAH DH G + L++ ++ + L + + + Sbjct: 49 ADVDYLLLTHAHIDHSGLIPLLYAKGFRGRIFTTNATKQLCDIMLRDSAHIQMFEAEWRN 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +A + F + + ++ + + + D I TD Sbjct: 109 RKAERSATLKKFVPLY-----DMEDAQNVMRQFEGYDYGCIIEI---CDGINIRFTDAGH 160 Query: 183 L----------CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 L G D N + IK +M++ G Sbjct: 161 LLGSASIEVWVEENGVSKKFVFSGDIGNVNKPLIKDP-AYIKDADIVVMESTYGDRSHGG 219 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVL----LGSS------LKRVVSVAIDVGIIKKDQLFLS 282 V ++ I G +V+ +G + ++++ + + +++ Sbjct: 220 TPDYVGELKQIFKRTFARGGNVVIPSFAVGRTQELLYFIRKIKEDNEKDNYLPEFDVYVD 279 Query: 283 ------------DESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTVI 329 G + + + +I G L ++ E R + VI Sbjct: 280 SPLAIEATSIFNKNYEGYFDDDAMELINKGINPIMFKGLKLAITSDESRQINFDRTPKVI 339 Query: 330 FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----------------------- 366 S+ + H+K+ L ++ + Sbjct: 340 ISASGMCEAGRIRHHLKHNLWRPECTILFVGYQAVGTMGRALIEGAKELKLFGEPIEVRA 399 Query: 367 -------VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKE-LALQEGIACVPPV 416 S H L R +P+ + +HGE + + L + G + P Sbjct: 400 EIAQLGGASSHADKEGLIRWINAFEKKPERVYVVHGEDSVCDSFTQCLRDEYGFDAIAPY 459 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQL 461 + ++ ++ G D ++ ++L Sbjct: 460 NGAVYDAATGECLKEGNKEKKTRRTVAGARSQSIYDRLVSAGKRL 504 >gi|254444141|ref|ZP_05057617.1| RNA-metabolising metallo-beta-lactamase family [Verrucomicrobiae bacterium DG1235] gi|198258449|gb|EDY82757.1| RNA-metabolising metallo-beta-lactamase family [Verrucomicrobiae bacterium DG1235] Length = 466 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 94/289 (32%), Gaps = 66/289 (22%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M L F LG G + + L + K I++DCG+ F + Sbjct: 1 MST-TLRF--LGAAGTVTGSRHLVE----TRGKRILVDCGL-FQGPKRN----RLKNWDP 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VY 111 + + + +THAH DH G L L H +YA+ + L+ Sbjct: 49 FPVDPNTIDVVLLTHAHVDHIGYLPRLVRDGFHGRIYATHPTVELVRILLADTAHLQEEE 108 Query: 112 ERVSKKIPCISFQA-----------------------GDKVDVGAFSIESVRVNHSIPET 148 + + K + + + V H I + Sbjct: 109 AKYANKKGYSKHSPALPLFTQRDAERAMDLLYGVSYGDEFTPIEGLVAKYRDVGH-ILGS 167 Query: 149 MALVIRSPVGN-----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 L +++ ++ +GD D IL + + L+ +ST R Sbjct: 168 AFLSLKTTDRPDRPKKLLFSGDIGRPHDVILRPPSQPY--------NVDYLVMESTYGDR 219 Query: 204 EGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 + +++ + + ++ A VL+ +F+ V R +S++ + + Sbjct: 220 LH---DPEDVRQGLANALQQAFSRNAPVLIPSFA--VGRSQSLLYLIRE 263 >gi|22536885|ref|NP_687736.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76788653|ref|YP_329469.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76798189|ref|ZP_00780440.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77406414|ref|ZP_00783473.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|22533735|gb|AAM99608.1|AE014224_11 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76563710|gb|ABA46294.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76586452|gb|EAO62959.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77174978|gb|EAO77788.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 269 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + +K ++ID G++ K + I ++ Sbjct: 7 KYSILASGSTG----NCFYIE----TPQKRLLIDAGLTGKKVTSLLAE--------INRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H DH + L H+ +YA+ +++ + F Sbjct: 51 PEDLDAILVTHEHSDHIKGVGVLARKYHLDIYANEQTWKVMDER-NMLGKVDVSQKHVFG 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G + G IES V+H + + + V D + D A L + D Sbjct: 110 RGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAGLIENAD 166 >gi|294951947|ref|XP_002787178.1| cleavage and polyadenylation specificity factor protein, putative [Perkinsus marinus ATCC 50983] gi|239901882|gb|EER18974.1| cleavage and polyadenylation specificity factor protein, putative [Perkinsus marinus ATCC 50983] Length = 606 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 82/313 (26%), Gaps = 86/313 (27%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSP----SSRKWIMIDCGVSFP--------KDDLPGV- 51 + LG +G + L + P R I++DCG + + V Sbjct: 14 RIEVDVLGAGRSVGRSCVLVTFVPPASSCKPRVRILLDCGANVSCGDPAHHEDEKQHSVV 73 Query: 52 ------------------------------------------DLVFPDITFIMKERKNLM 69 D ++PD + L Sbjct: 74 AEHADDDDSDSVEDSSATTPQQLLRSVIRQSLAKHRHRVPMLDRLWPDNS--KTGMLPLD 131 Query: 70 AIFITHAHEDHYGALHDLWS------FLHVPVY---ASPFAI-GLLEAKRVYERVSKKIP 119 A+ +TH H DH GAL L + + LL + P Sbjct: 132 AVLVTHFHLDHTGALPYLTEVLMSGQRRSPEIVMSLMTKLTAPMLLRDYAKEQSPPPYYP 191 Query: 120 CISFQAGDKVDVG----------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 C +K V + + H + + +I + +TGD+ Sbjct: 192 CHIESCFEKALVMAPGSQRTLTCGAVVTAYPAGH-VVGALMFMIEYEGLTLFYTGDFSTQ 250 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI--------KKNIYDIM 221 + + + + I ++ ++T K ++ + D M Sbjct: 251 AEFTMPAANLLTRQLPLTGKTIDVVISEATFGSSVHMNSRSKEARLCNIVCGRERLRDYM 310 Query: 222 KNAKGCVLVTTFS 234 +A L+T Sbjct: 311 GSADVPPLITVMP 323 >gi|330508783|ref|YP_004385211.1| beta-lactamase domain-containing protein [Methanosaeta concilii GP-6] gi|328929591|gb|AEB69393.1| beta-lactamase domain protein [Methanosaeta concilii GP-6] Length = 228 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 22/201 (10%) Query: 23 LYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 Y Y + ++ID GV + G D + +I + E + I TH H DH G Sbjct: 25 AYVYLVDAKSCLVLIDAGVGY------GNDKIEKNIRSLGSEPAQVWHIIATHCHIDHIG 78 Query: 83 ALHDLWS-FLHVPVYASPFAIGLLEAKRVY------ERVSKKIPC---ISFQAGDKVDVG 132 L LW + A +E K V + I +++ +G Sbjct: 79 GL-HLWRDKYGSKIIAHELDRAGIEGKNNELTAASMYGVDYRPVMLDTILSGEHNQIRLG 137 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + P ++++ I +P G ++ D +D + + Sbjct: 138 EMEFKVLHTPGHTPGSISVYIDTPEGRVLFGQDIH--GPFSPSWDSDMVEWRRSMRKLLD 195 Query: 193 A---LMCDSTNAMREGTCISE 210 +C+ + G I E Sbjct: 196 LEADFLCEGHAGIYRGEEIRE 216 >gi|320537368|ref|ZP_08037323.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] gi|320145833|gb|EFW37494.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] Length = 322 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 30/204 (14%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF-PDITFIMKERKNLMAIF 72 G +G N + + ++ D G + G+DL PD ++K+ +F Sbjct: 55 YGTVGGNTTCVEI-ETNDGETLIFDAGTGIRE---LGIDLTRRPDYR----KKKHTYHLF 106 Query: 73 ITHAHEDHYGALHDLWSFLHVP----VYAS-PFAIGLLE----------AKRVYERVSKK 117 TH H DH L VY++ A LE + + + K Sbjct: 107 FTHFHWDHIQGLPFFIPAFDPRNTIIVYSTRKKAKEFLEEQMKYPYFPISMLGEDGFAAK 166 Query: 118 IPCISFQAGDK-VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + + + +G I RV H + ++ + D + Sbjct: 167 FEFRYIKPDEPIISIGDVDIGWHRVRHPGGCNAYSITEKNGKKVIFSTD-----TELREQ 221 Query: 177 VTDKDSLCAIGNEGILALMCDSTN 200 +K+ + ++ DS Sbjct: 222 DFEKNEGNKLFYNNTDLMIIDSQY 245 >gi|120555521|ref|YP_959872.1| beta-lactamase domain-containing protein [Marinobacter aquaeolei VT8] gi|120325370|gb|ABM19685.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 473 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 109/383 (28%), Gaps = 55/383 (14%) Query: 35 IMIDCGVSFPK---DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF- 90 I++DCG+ F + D D ++ A+ +TH H DH G + L + Sbjct: 27 ILVDCGL-FQGAEKESHNAADSCIIDFP-----IDHIRALIVTHVHIDHVGRIPYLLAAG 80 Query: 91 LHVPVYASPFAIGLLEAKRV---------YERVSKKIPCISFQAGDKVDVGAFS------ 135 P+ S + +L + ++ + G + Sbjct: 81 FDGPIICSEPSAIMLPEILEDALRIGFTRDRGLINRVLDKIRSQLVPLAYGQWHEVLSDE 140 Query: 136 -----IESVRVNH---SIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + R H S IV +GD +L Sbjct: 141 SEALNVRLQRAGHILGSAYVECDAQTVEGHERIVFSGDLGAPHSPLLP--------APES 192 Query: 188 NEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 E L+ +ST + + + K++ + G VL+ FS + R + ++ Sbjct: 193 PEKADRLIIESTYGDKNHEDRKTRRYRLKSVLEHALEDGGTVLIPAFS--IGRTQELLYE 250 Query: 247 AEQI-----GRKIVLLGSSLKRVVSVAIDVGIIKKDQ-----LFLSDESFGLYPREQLIV 296 E + I G S D+ II + + + E L + Sbjct: 251 IEGLIAEFGDEAIEQTGDSPSPNALNWKDLEIIVDSPLAAEFTRIYRDLKPYWDNEALAL 310 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIGHIKNRLVEQGVR 355 + G L + E + + I G+ + A G + N L Sbjct: 311 VKAGRHPLSFEQLTVIGSHEDHLNAVDYLARLHRPCVVIAGSGMCAGGRVVNYLKAMLGD 370 Query: 356 VIAEDAECPVHVSGHPYPNDLKR 378 + +G P + L Sbjct: 371 RRNDVLFVGYQAAGTPGRDILTY 393 >gi|312135679|ref|YP_004003017.1| beta-lactamase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775730|gb|ADQ05217.1| beta-lactamase domain protein [Caldicellulosiruptor owensensis OL] Length = 198 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 32/190 (16%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATKIESII------LENNLVPKAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAG 126 +TH H DH+ L +P+YA +L + + F+ G Sbjct: 51 LTHGHFDHFLGCCYLKQRFKLPIYAHRAEKEILSNPAYNLSYLIGSEIKINCDGY-FEDG 109 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT--DKDSLC 184 D + FS++ + P + + NI+ +GD D D+ D+ + Sbjct: 110 DVFEFDDFSLKVLHTPGHTPGSSCFL----YDNILFSGDTLFKDSFGRCDLPLGDESQIF 165 Query: 185 AIGNEGILAL 194 +L L Sbjct: 166 ESIKGKLLVL 175 >gi|294794003|ref|ZP_06759140.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] gi|294455573|gb|EFG23945.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] Length = 211 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 1 MKNEELVFL--PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M ++LV + PLG + G N + G + + +ID ++ Sbjct: 1 MSEQQLVLMRMPLGPL---GTNCYVI--GDKAIGEAFIIDP----ATAEVL--------- 42 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE--- 112 + K A+ +TH H DH G + ++ + HVPVY + L E Sbjct: 43 DALKKHDLKPKAVVLTHGHGDHIGGIQEIVNIYHVPVYIHKGDVPYLSDPELNLSAYSNP 102 Query: 113 -RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + K I + GD + G +E + P + + Sbjct: 103 TPIMVKAEIIEVKQGDHITCGDIDLEVLETPGHTPGGVCYYME 145 >gi|238917000|ref|YP_002930517.1| ribonuclease Z [Eubacterium eligens ATCC 27750] gi|238872360|gb|ACR72070.1| ribonuclease Z [Eubacterium eligens ATCC 27750] Length = 269 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 17/163 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + ++ D G+S ++ L L K++ AIF+TH Sbjct: 12 GNCIYLG----TEDTHVLFDAGISRKRIEEGLNTAGLSL----------KDIDAIFVTHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L + +P+Y++ I +E A + + +G ++ Sbjct: 58 HIDHTKGLGVISRKDGIPIYSTSGTIDGIEQ-ISSLGNIPDGIFNKINADEDISIGDVTV 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 R++H E +A + + D V D Sbjct: 117 HPFRISHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVD 159 >gi|313888462|ref|ZP_07822129.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845491|gb|EFR32885.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 208 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 55/181 (30%), Gaps = 20/181 (11%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VGE+ N + ++ ++D G ++ + K N+ I + Sbjct: 10 VGELQENCFIL---FDENKDAFVVDPG----GSSENIIEAI-------EKNGLNIKYILL 55 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L PVY S LE+ R S I D Sbjct: 56 THGHFDHVGAVAALVKKYKAPVYMSKDDRAFLES-PKEVRASSFGMQIEAADVDVFVKEG 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVG---NIVHTGDWKLDDD--AILGDVTDKDSLCAIGN 188 I + ET + S N + GD + +D + Sbjct: 115 DEIPFSEGTIKVIETPGHTLGSVCYLFENYLFAGDTLFNGSIGRTDFPESDHSLMIESLK 174 Query: 189 E 189 + Sbjct: 175 K 175 >gi|295101698|emb|CBK99243.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Faecalibacterium prausnitzii L2-6] Length = 263 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 12/134 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 +++++D G GV + + + I +TH H DH L Sbjct: 18 VRCGERYLIVDMG--------KGVRTTGAALKELELNISDCDGILVTHEHSDHVKGLSTF 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVY + + L+A + + G + D+G F +++ +H +P Sbjct: 70 LKKYPLPVYGAEETLEFLDA---NGVIPASCDLTALTPGREEDIGVFGVKAFPTSHDVP- 125 Query: 148 TMALVIRSPVGNIV 161 + I +P + Sbjct: 126 CVGYRIHTPDEKTM 139 >gi|297617557|ref|YP_003702716.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus lipocalidus DSM 12680] gi|297145394|gb|ADI02151.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus lipocalidus DSM 12680] Length = 532 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 73/529 (13%), Positives = 139/529 (26%), Gaps = 93/529 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG + + + + IDCG F G ++ + + Sbjct: 1 MKLRF--LGAARTVTGSF----FFMEVNGIRFAIDCG-MFQG----GKEVRERNYQNFVI 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 ++L + +THAH DH G + L + P+Y + L Sbjct: 50 NPRDLEFLILTHAHIDHSGLIPKLCNLGFKGPIYCTYATAELASIMLPDSGHIQEMEVER 109 Query: 110 -------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 V H I + Sbjct: 110 KNRGLTRAGKPVLRPIYTVEEAEKCLSQFRPVNYDEMISPVKDIQFRLRDAGH-ILGSAL 168 Query: 151 LVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + +V TGD + + D T E L+ +ST R Sbjct: 169 VELWVTEPQGTIKVVFTGDIGRVNQPFVKDPT--------PIENADYLVMESTYGNRLHQ 220 Query: 207 CISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA----------------EQ 249 ++ + + + G +++ +F+ V R + ++ Sbjct: 221 QNFDRQDMLREVIQYTMAKGGNLIIPSFA--VERTQDLLFDLSVLYQKGELSPDIPIYID 278 Query: 250 IGRKIVLLG--SSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 I + + KD L L + F +E + T Sbjct: 279 SPLAIAATEIFRKMVASWDDETRLMLYQGKDPLDLPNLKFSRTAQESARLNETSGGTVII 338 Query: 307 SALAQLSRG---EMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 SA G L + TV+F G I + + + Sbjct: 339 SASGMCDAGRIKHHLKHNLWRPEATVLFVGYQAEG--TLGRRILDGEKLVRIHGEEIVVK 396 Query: 363 CPVHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + V S H L + + P + +HGE L++ E +E Sbjct: 397 ADIRVIEGYSAHADRIGLLSWLKHFKNMPSGVFLVHGEEDALLSLAEAVRKELGLRAAIP 456 Query: 417 RNGKMLRLFP--DPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLSF 463 + L P + + E + + ++ + R +L+ Sbjct: 457 NWLDEVELVPRVESKAMGVEAGLADQKEHLSEALQAEEMYLKVRLKLNE 505 >gi|62185458|ref|YP_220243.1| hydrolase [Chlamydophila abortus S26/3] gi|62148525|emb|CAH64296.1| conserved hypothetical hydrolase [Chlamydophila abortus S26/3] Length = 262 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 19/172 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 F PL G G N A G + I+ID G+S LV + + ++ Sbjct: 4 FFPL-ASGSKG-NCAYLG----TESSKILIDLGIS--------KQLVTRGLLSMNVHPED 49 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AIF++H H DH + H P+ + L F G Sbjct: 50 IQAIFVSHEHSDHISGIKSFIKTYHTPIICNLETARNLCQLLDMH-----PTFKIFSTGT 104 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I++ V H + + + + D I+ ++ D Sbjct: 105 TFSFHDLKIQTFNVPHDAVDPVGFIFHYRDEKLGFCTDLGWVTSWIIHELYD 156 >gi|291522323|emb|CBK80616.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Coprococcus catus GD/7] Length = 264 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 69/220 (31%), Gaps = 28/220 (12%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I+ID G+ ++ E ++ A+ +TH H DH + Sbjct: 19 NDDTHILIDAGI-----SKKRIEQGLKSFG---TEGTDIDALLVTHEHMDHIQGIGVWSR 70 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 HVP+Y + + + + + + G+ + +I + H + + Sbjct: 71 KYHVPIYGTRGTLEEI-WRTKSLGKVDESLFHVIRPGETFQINDMTIHPFSIPHDARDPV 129 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-----E 204 + I + I D D+ + + + L ++ + Sbjct: 130 SYQIETADARIGTVTDLGY---------FDEAIIDEL--KDCDLLYVEANYDLHMLEVGP 178 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 ++ I N + G ++ + R++ +I Sbjct: 179 YPYQLKRRIAGNYGHLCNEMSGQLVGRLLNE---RLQQVI 215 >gi|220917258|ref|YP_002492562.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955112|gb|ACL65496.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 460 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 78/458 (17%), Positives = 137/458 (29%), Gaps = 83/458 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G + + L GS I++D G+ F + P + + R Sbjct: 4 IRF--LGAAGTVTGSRFLVETGSVR----ILVDAGL-FQGHKELRLRNRAP---WPVSPR 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYE------ 112 L A+ +THAH DH GAL L PV+ +P L + E Sbjct: 54 D-LTAVVLTHAHVDHSGALPLLARQGFRGPVHCTPATRDLAGLLLPDSGRLQEEEARYAN 112 Query: 113 -----RVSKKIPCISFQAGDKV--------------DVGAFSIESVRVNHSIPETMALVI 153 + + +P + Q V +I R H I + + + Sbjct: 113 RKGYSKHAPALPLYTEQDAQDVLPRLAPLRYGEPRQIAPGVTIRFHRAGH-ILGSALVEL 171 Query: 154 RS---PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 I+ +GD IL +D + AL+ +ST A R S Sbjct: 172 SVGGARGARILFSGDLGRYGAPIL---SDPE-----PGPAADALVLESTYAGRRHEAASP 223 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI------IDIAEQIGRKIVLLGSSL--- 261 + + G ++V F+ V R + I ++ +I V + S + Sbjct: 224 AAALAAEVHAVVRSGGALVVPAFA--VGRTQEILFTLRELEDRREIPAIPVFVDSPMAVD 281 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-----------SALA 310 + +A + ++ L P + + S +A Sbjct: 282 ATPIYLAHREDHDDETVRRIAAGEEPLRPAKLTFCRSPDQSKAINDVRGPCIILSASGMA 341 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV--- 367 R + ++N + + V Sbjct: 342 TGGRVLHHLARRLPDPRNTVLLVGFQAGGTRGWRLQNGAETLRIHGEDVPVKARVATLGG 401 Query: 368 -SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHK 402 S H +++R + +P+ +HGEP L A K Sbjct: 402 FSAHADEAEIRRWLATLPAQPRRTFLVHGEPTALAAAK 439 >gi|315651812|ref|ZP_07904816.1| metallo-beta-lactamase [Eubacterium saburreum DSM 3986] gi|315485942|gb|EFU76320.1| metallo-beta-lactamase [Eubacterium saburreum DSM 3986] Length = 220 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 26/202 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LG V +Y + S + ++D P + I Sbjct: 1 MNKIGVYVMTLGPVQ-----TNVYIAYNKESLECFIVD-----PSAQAQEI------INV 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + + +AI +TH H DH A++DL ++ VY S +L R S Sbjct: 45 IKEHKLKPVAILLTHGHFDHIMAVNDLLKEYNIKVYISKLDEEMLYDSRKSGGSSFIGSG 104 Query: 121 ISFQ------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDA 172 + D + + I + + I ++ +GD ++ D Sbjct: 105 YVTKADVLLNDNDVLHLLDKDIVFIATPGHTKGSGCYYI--ADEKLLFSGDTVFREDCGR 162 Query: 173 ILGDVTDKDSLCAIGNEGILAL 194 D ++ + +L L Sbjct: 163 TDLYGGDNPAIIRSIYDKVLTL 184 >gi|78043144|ref|YP_360868.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995259|gb|ABB14158.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 504 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 80/280 (28%), Gaps = 52/280 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F G + + L+ + ++DCG+ F + + Sbjct: 1 MELTFF--GAADTVTGSCYLF----NVAGHKFLVDCGL-FQGPKA----IKERNYGEFPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 + + I +THAH DH G + L +YA+ + L +++ Sbjct: 50 NPREIEFILLTHAHIDHSGLIPKLVKKGFKGTIYATEPTVDLAAVMLPDSGHVQEMEVER 109 Query: 119 ----------------------------PCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 + + H I + Sbjct: 110 KNRKLRRAGKPELQPIYTADDAFNALAYFQKIPLETPITPLPGLEVTFFDAGH-ILGSAM 168 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + I + T + D + + L+ +ST R + + Sbjct: 169 IKIAYKGQDATRTILFTGDLGRNGRPFMKEPQKVPL----TDILVLESTYGDRVRSEEGD 224 Query: 211 -KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 K + K++ + + G +++ F+ + R + +I I Sbjct: 225 LKTLLKSLIEKVYRRNGNLIIPAFA--MERTQDLIYILND 262 >gi|171059167|ref|YP_001791516.1| beta-lactamase domain-containing protein [Leptothrix cholodnii SP-6] gi|170776612|gb|ACB34751.1| beta-lactamase domain protein [Leptothrix cholodnii SP-6] Length = 467 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 87/291 (29%), Gaps = 64/291 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F+ G E+ + L + ++DCG F G ++ + Sbjct: 1 MRLSFI--GAAQEVTGSCFLVE----TDEVRFLVDCG-MFQG----GREVRERNFQGWPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCI- 121 + + L + +THAH DH G L L + P++ + LL + ++ Sbjct: 50 DPRTLDFVLLTHAHIDHSGLLPRLCALGFKGPIHTTTATADLLSVMLLDSAFIQESDWTR 109 Query: 122 ----------------------------------SFQAGDKVDVGAFSIESVRVNHSIPE 147 + H I Sbjct: 110 AQRKRGRTPRNGAAPAELLYTVAQAEACLAQVRGVAYDTELKPHADVRCRFRDAGH-ILG 168 Query: 148 TMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + I +V +GD I+ D T L+ +ST R Sbjct: 169 SAIAEIWLDEPGRTRKLVFSGDLGQPGRPIVRDPTPIA--------DADVLVVESTYGNR 220 Query: 204 EGTCISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + E + + I D+++ +G V++ F+ + R + ++ + + R Sbjct: 221 LHRPMQETVDELVRVIEDVLRRRQGNVIIPAFA--LGRTQEVLYLLTDLCR 269 >gi|103487953|ref|YP_617514.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] gi|98978030|gb|ABF54181.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] Length = 473 Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 85/278 (30%), Gaps = 52/278 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E + LG G + + L G IMIDCG+ F G +L + + Sbjct: 20 EAISIAFLGAAGTVTGSRYLLG----DRSAKIMIDCGL-FQG----GRELRERNWEPALS 70 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 + + + I +THAH DH G + + + L Sbjct: 71 DHRAIDTIVLTHAHLDHSGYIPRFVKEGWSGRILCTDATADLCGLLLPDSGFLQENDAAF 130 Query: 106 -------EAKRVYERVSKKIPCISFQAGDKVDVGAFS-------IESVRVNHSIPETMAL 151 K +KK ++ D V GA+ + R H I + Sbjct: 131 ANRHGYSRHKPALPLYTKKDAEVALDYLDPVRFGAYRSVAGGAELRFHRAGH-ILGAAFV 189 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ I+ +GD D L L+ +ST R + Sbjct: 190 ELKWRDRTILFSGDLG--------RFNDPVMLDPSPPVEADYLIVESTYGNRSHEALDAV 241 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + G V++ F+ V R +SI+ + Sbjct: 242 AALGDAIERCVRRGGTVVIPAFA--VGRAQSILYHLSR 277 >gi|302333221|gb|ADL23414.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 207 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESEKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ VPVY L+ K + ++ + ++ F Sbjct: 65 DIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSTEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLADSIQDKIFEL 180 >gi|222529927|ref|YP_002573809.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456774|gb|ACM61036.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 198 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 30/189 (15%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATKIENII------VENDLIPRAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRVYERVSKKIPCIS---FQAGD 127 +TH H DH+ L +P+YA +L A + + ++ F+ GD Sbjct: 51 LTHGHFDHFLGCSYLKQRFKLPIYAHRVEKEILSNPAYNLSYLIGSEVKINCDGYFEDGD 110 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT--DKDSLCA 185 ++ FS++ + P + + NI+ +GD D D+ D+ + Sbjct: 111 VLEFADFSLKVLHTPGHTPGSSCFL----YDNILFSGDTLFKDSFGRCDLPLGDERQIFE 166 Query: 186 IGNEGILAL 194 E +L L Sbjct: 167 SIKEKLLVL 175 >gi|319427775|gb|ADV55849.1| RNA-metabolising metallo-beta-lactamase [Shewanella putrefaciens 200] Length = 480 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 72/457 (15%), Positives = 141/457 (30%), Gaps = 97/457 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ G + + E +++ A Sbjct: 8 LGATREVTGSCHLL----SVDHEHLLLDCGLI-----QGGKEDELRNHDPFTFEPESISA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L + P+Y L ER +KK Sbjct: 59 VVLSHAHIDHSGRLPLLVKSGFYGPIYTHKATAELCAIMLKDAAMLQSRDTERTNKKRAK 118 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR--- 154 + + + + I H I + + I Sbjct: 119 HDLEPLEPLFTVEDVEQVMRQFIPLEYGQVINVIPHVDICLSDAGH-ILGSALVEIWLGE 177 Query: 155 -SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 IV +GD IL + T D+ ++ +ST R ++ Sbjct: 178 GKSQKKIVFSGDLGRAGMPILHNPTLVDT--------ADLVLMESTYGDRFHRSWTDTLA 229 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG--------RKIVLLGSSLKR 263 +K + + G +L+ FS V R + ++ + R + +++ Sbjct: 230 ELKAIFTKAVTESHGNILLPAFS--VGRAQELLYLFHLYAKEWDLSRWRICLDSPMAIEA 287 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LS 313 + ++ +D + +S G +P + I T + + + + + Sbjct: 288 TRVYVNNYQLMDEDFKHFTRQSPGKHPLLSNVEFIQTTEESIALNDIHKGLIIIAGSGMC 347 Query: 314 RG-------EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 G E + + +R PG + + E + + + Sbjct: 348 NGGRIRSHFEHNLWRPECDVIICGYQARGTPG-----RALVDGAEELTIHGNSIKVAAKL 402 Query: 366 HV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPL 396 H S H +L Y +P LV +HGEP Sbjct: 403 HTVGGLSAHADQAELLHWYHHFDDQPP-LVLVHGEPE 438 >gi|18394685|ref|NP_564070.1| DNA cross-link repair protein-related [Arabidopsis thaliana] gi|332191672|gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 549 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 123/401 (30%), Gaps = 34/401 (8%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+THAH+DH G + + P+Y++ I LL + + + G V Sbjct: 30 FLTHAHKDHTVGVSP--SNIVVFPIYSTSLTISLL---LQRFPQLDESYFVRVEIGQSVI 84 Query: 131 V----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDS 182 V G F + + NH P + + GNI+HTGD + V Sbjct: 85 VDDPDGEFKVTAFDANH-CPGAVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYVGRSHG 143 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + + G + L C + ++ + I + + N +V + + Sbjct: 144 MKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACDMLGQEDV 203 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVIATG 300 +++++ G KI + + + +I + + S +L + Sbjct: 204 LLEVSRTFGSKIYV---DKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYERTSA 260 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 E RS L + + + + K R V V E Sbjct: 261 KLAEARSKL-----QSEPLIIRPSAQWYVC---DDEDDWKSGSIQKQRKVRFSEAVKDEF 312 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----HGEPLHLVAHKELALQEGIACVPP 415 V S H +L+ Q + P+ +V+ E ++ + ++ Sbjct: 313 GLWHVCYSMHSSRAELESAMQLLSPKWVVSTVPSCRAMELNYVKKNCFISRFSPDDPFWK 372 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIA 456 + + + P V L +I + Sbjct: 373 LLDID-MEASPVAAADTQTVALSCCLMSEQIILDSGKSKLE 412 >gi|329962840|ref|ZP_08300725.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328529397|gb|EGF56310.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 284 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 18 MKVKFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 61 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 + + A+F+TH H DH A+ L L++P+Y + G+ ++ + E++ Sbjct: 62 GISMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYTTARIHEGINKSYCMTEKLHTSARY 121 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + F IES V H + + I D Sbjct: 122 LEKQ--QPMQLEDFHIESFEVPHDGTDNVGYCIEIDGKTFSFLTD 164 >gi|317485388|ref|ZP_07944267.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] gi|316923347|gb|EFV44554.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] Length = 539 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 10/128 (7%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + L +DCG+ + + + + + Sbjct: 1 MKVHFLGAAQTVTGSCYLIEACGIR----FTVDCGMHQGNSE-----IEARNFDTDIYQS 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 N+ I +THAH DH G L + +Y +P L +++ Q Sbjct: 52 GNIDFILLTHAHIDHSGLLPRIVHEGFKGSIYCTPPTAALAGLMLEDSAHIQEMEAEWRQ 111 Query: 125 AGDKVDVG 132 K G Sbjct: 112 KKQKRHTG 119 >gi|296088547|emb|CBI37538.3| unnamed protein product [Vitis vinifera] Length = 558 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 101/329 (30%), Gaps = 33/329 (10%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+THAH+DH + ++ P+Y++ L+ + + G + V Sbjct: 61 FLTHAHKDHSSGISTHSAY---PIYSTHLTKTLI---LQQYPQLDDSLFVGIEVGQSMVV 114 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDSL 183 G F + + NH P + + GNI+HTGD + + VT Sbjct: 115 DDPDGRFGVTAFDANH-CPGAVMFLFEGDFGNILHTGDCRLIPECLQNLPQKYVT---KK 170 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 + D T S+ + + + + +V S + + + Sbjct: 171 GKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEIL 230 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 I+++ G KI + + + + L S E + Sbjct: 231 INVSRIFGSKIFV---DKANNPECFQALTHMVPEILSQDPSSRFQV-FEGFPKLC----E 282 Query: 304 EPRSALAQLSRGEMRN-VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 ++ LA+ + + + +P E N V + Sbjct: 283 RAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWHVC-- 340 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+ Q + P+ +V+ Sbjct: 341 ----YSIHSSRQELEWALQLLAPKRVVST 365 >gi|30022341|ref|NP_833972.1| hydroxyacylglutathione hydrolase [Bacillus cereus ATCC 14579] gi|29897898|gb|AAP11173.1| Hydroxyacylglutathione hydrolase [Bacillus cereus ATCC 14579] Length = 209 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +++ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEKQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYYT--KEANAVFSGDVLF 154 >gi|146296222|ref|YP_001179993.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409798|gb|ABP66802.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 265 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 24/193 (12%) Query: 5 ELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 E+VF PL G G N+ L Y I++D GVSF + + I Sbjct: 4 EIVFCPLYSGSSG----NVILISY----KDTTILVDAGVSF--------RKLTCALNKIG 47 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + AI ++H H DH + L+VP+ + ++ + Sbjct: 48 FNK-QIDAILLSHDHSDHVKCAGVYFRKLNVPIITNYKTWEAVKNSL---GKVDERNVHL 103 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVTDK 180 + G VG+ I++ + H + M I + D ++ A D +D Sbjct: 104 IETGTSFSVGSIGIDTFSIPHDAKDPMGFCFYLGRKKISISTDLGHVNENVAQKIDFSDI 163 Query: 181 DSLCAIGNEGILA 193 L A + +L Sbjct: 164 ILLEANHDIEMLL 176 >gi|229071764|ref|ZP_04204979.1| Metallo-beta-lactamase [Bacillus cereus F65185] gi|228711359|gb|EEL63319.1| Metallo-beta-lactamase [Bacillus cereus F65185] Length = 209 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDTFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|159030402|emb|CAO91298.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 546 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 32/218 (14%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-LMAIFITHAHED 79 L G I++DCG++ D+ + + +K + +F +HAH D Sbjct: 30 CLLLKIGPYR----ILLDCGLA--------------DLKPLTQNKKPPVDLVFCSHAHSD 71 Query: 80 HYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD-VGAFSIE 137 H L L +PVYAS + LL + C + + ++E Sbjct: 72 HIRGLMALHQTYPQLPVYASEVTVQLLPLQWPDSAEEIGSFCQGWPWRSPITLFDDLTVE 131 Query: 138 SVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGIL 192 H +P ++ +++TGD+ L + ++ D G + Sbjct: 132 IFPAGH-LPGAAVVLFTYKTPKRTYKVLYTGDFSLSNFQLVEGLSIDLLR----GISPDV 186 Query: 193 ALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVL 229 ++ S R EK + IY + + +L Sbjct: 187 LIIEGSYGTERHPHRRQQEKQLMNRIYHAIAEGQNVLL 224 >gi|294012576|ref|YP_003546036.1| putative exonuclease [Sphingobium japonicum UT26S] gi|292675906|dbj|BAI97424.1| putative exonuclease [Sphingobium japonicum UT26S] Length = 521 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 63/233 (27%) Query: 32 RKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I++DCG+ L G P ++ A+ +THAH DH G L L Sbjct: 7 DRAILVDCGLFQGSRTLETLNHGAFGFAP---------ASIDAVVLTHAHIDHCGLLPKL 57 Query: 88 WSF-LHVPVYASPFAIGLLEAKR-------------------------------VYERVS 115 + PV+ +P LLE + ++ Sbjct: 58 AAQGFDRPVWCTPATSDLLEYMLADAGRIQESEADRRNRRRDRAGESRFEPLYTEEDALN 117 Query: 116 KKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 D F H I ++ I + ++ +GD + Sbjct: 118 AWRLTHPTPLCQWFDPAPGFRARFWNAGH-ILGAASVEIEAAGMRLLLSGDLGPIN---K 173 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--------EKGIKKNIYD 219 D + + ++C++T R ++ E IK+ + Sbjct: 174 AFHPDP-----LSPTSLDHVVCEATYGDRAREKLTIEQRRTQLEAEIKEALSR 221 >gi|89902698|ref|YP_525169.1| beta-lactamase-like protein [Rhodoferax ferrireducens T118] gi|89347435|gb|ABD71638.1| beta-lactamase-like [Rhodoferax ferrireducens T118] Length = 263 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 53/251 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G I + + ++ID G GV + PD Sbjct: 1 MKVRV--LGCSGAISKDCRTTSFLIDGD---VLIDAGT--------GVGDLTPD------ 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKK 117 E + + +TH+H DH AL + V ++A I LE + + Sbjct: 42 EMSGIEHVLLTHSHLDHVLALPLMVDAIAARRTTPVQIHALAGTIAALEKHIFNDVIWPD 101 Query: 118 -----------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + Q G + G +E + H++P + + + G V TGD Sbjct: 102 FARLPTPEAPFVSFHEIQVGQTLQFGRKLVEVLPAVHTVP-AVGFAVTAGNGCWVFTGDT 160 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT------CISEKGIKKNIYDI 220 + + + + L+ ++ + RE +S + + I Sbjct: 161 ER----------NPAFWDRLNQLNVAMLVIETAFSNREKDLAQRSLHLSPHVLADELDCI 210 Query: 221 MKNAKGCVLVT 231 A + +T Sbjct: 211 APGAAYPIYIT 221 >gi|270296775|ref|ZP_06202974.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272762|gb|EFA18625.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 291 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 25 MKVKFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 + + A+F+TH H DH A+ L L++P+Y + G+ + + E++ + Sbjct: 69 GISMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYTTARIHEGINRSYCMTEKLYSSVRY 128 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + F IES V H + + I D Sbjct: 129 LEKQ--QPMQLEDFHIESFEVPHDGTDNVGYCIEIDGKVFAFLTD 171 >gi|195501976|ref|XP_002098027.1| GE10135 [Drosophila yakuba] gi|194184128|gb|EDW97739.1| GE10135 [Drosophila yakuba] Length = 740 Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 104/334 (31%), Gaps = 53/334 (15%) Query: 66 KNLMAIFITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + F+TH H DH G L P+Y SP L+ + Sbjct: 289 DRVTHYFLTHFHADHYIG----LTKKFCYPLYVSPTTARLVRTFIK----IDETYIYEID 340 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 + V + ++ NH P + + I+HTGD++ D +SL Sbjct: 341 VDQTLTVDGVEVTALEANH-CPGALMFFFKLRSGECILHTGDFRA--------SADMESL 391 Query: 184 CAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSSV 237 N I L D+T + + D++ KNA +L+ S + Sbjct: 392 PIFWNHANIDLLYLDTTYLNKNYDFCHQSESVDRAVDLVRVFLEKNASKRILIVCGSYVI 451 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 + + + +A++ ++ + + V +K +L ++ + Sbjct: 452 GKEKIWLALAKEFNLRVWTES-------NRSTAVRCLKWPELDSVLTEDPREANLHVVAM 504 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 S + + + G E N G R+ Sbjct: 505 GKISYPSLVDYFSLFEDQYDMLLGIRP-----------SGWEK------NTKPSYGKRIS 547 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 E S H +L+R ++++P+ +++ Sbjct: 548 TIGIEY----SEHSSYKELERFVRFLKPKRVIST 577 >gi|317480133|ref|ZP_07939243.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] gi|316903680|gb|EFV25524.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] Length = 267 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 1 MKVKFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 + + A+F+TH H DH A+ L L++P+Y + G+ + + E++ + Sbjct: 45 GISMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYTTARIHEGINRSYCMTEKLYSSVRY 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + F IES V H + + I D Sbjct: 105 LEKQ--QPMQLEDFHIESFEVPHDGTDNVGYCIEIDGKVFAFLTD 147 >gi|289208145|ref|YP_003460211.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. K90mix] gi|288943776|gb|ADC71475.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. K90mix] Length = 267 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 55/177 (31%), Gaps = 34/177 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L LG G IG N + I+ID G L E Sbjct: 3 LSVRILGASGGIGPNRRTTSILI---DEDILIDAGSGVGDLTL--------------GEL 45 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL---HVP---VYASPFAIGLLEAKRVYERVSKKIP 119 + + +F+TH+H DH G L L + + P ++A P + L + Sbjct: 46 QKIRHVFLTHSHLDHIGFLPMLADMVYSSNAPPIQIHALPPTLKALREHVFNWVIWPDFT 105 Query: 120 CISFQAGDKVDVGAFS-----------IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 C+ + + ++ H++P V+ + TGD Sbjct: 106 CLPSPEQPLLQFRPIRPDQQVSIGLREVHTLPALHTVPAIGYGVMHNDGVGFAFTGD 162 >gi|198284391|ref|YP_002220712.1| beta-lactamase domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668042|ref|YP_002427056.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248912|gb|ACH84505.1| beta-lactamase domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520255|gb|ACK80841.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 462 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 76/471 (16%), Positives = 135/471 (28%), Gaps = 88/471 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G G + + G K ++IDCG F G DL + T + K++ + Sbjct: 7 GAAGGVTGSCHFLRVG----DKKLLIDCG-MFQG----GHDLEEENRTEFGFDAKDIDYL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EAKRVYERVSKK 117 +THAH DH G + L + + L EA+R R ++ Sbjct: 58 LLTHAHLDHCGRIPLLVKRGFRGEIITTSATRELARLVLMDAAGLAAEEARRSNRRHLRQ 117 Query: 118 IPCISFQAGDKVDVGAFSIESVRV-------------------NHSIPETMALVIRS--- 155 S D DV R I + +++ + Sbjct: 118 GGAESAPIYDITDVLDTMDRFGRSADYGQKMEVCPGVNATFGDAGHILGSAWILVEASEA 177 Query: 156 -PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK--G 212 IV++GD I+ T ++ ++T R I Sbjct: 178 GRQQRIVYSGDLGNRGKPIINPPT--------PAPQADVIVMETTYGDRLHKAIGPSVDE 229 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRV 264 ++ I D +K G ++ TF+ + R + ++ + + L Sbjct: 230 LRDAILDTLKRG-GNAIIPTFA--LERAQDLLYYLREMMNDNQIPANLPVFLDSPMAISA 286 Query: 265 VSVAIDVGIIKKDQLFL------SDESFGLYPREQ-------LIVIATGSQGEPRSALAQ 311 + + + + +I G+ S +A Sbjct: 287 TEIFRRHPECFNPGTREGLQHGADPFALRNLHFTRETSESMGINLIKGGALIMAGSGMAT 346 Query: 312 LSRGEM--RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV-- 367 R R+ E +VIF A G I + + ++ Sbjct: 347 GGRVTHHLRHNIWREDSSVIFVGYAAQG--TLARRIIDGAKTVRIFGEEVHVAASIYTIG 404 Query: 368 --SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 S H ++L Y RP V +HGE ++ G+ PV Sbjct: 405 GFSAHADHDELLAWYGDQRPTRTVLVHGEDNGREGIAKVLRARGLQVDCPV 455 >gi|229180539|ref|ZP_04307881.1| Metallo-beta-lactamase [Bacillus cereus 172560W] gi|228602963|gb|EEK60442.1| Metallo-beta-lactamase [Bacillus cereus 172560W] Length = 239 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MSDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDTFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|290770035|gb|ADD61800.1| putative protein [uncultured organism] Length = 261 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 21/210 (10%) Query: 35 IMIDCGVSFPKD-DLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I++D GVS + D + + P + + IFITH H DH L H+ Sbjct: 25 ILVDAGVSCKRLCDALKANEIDPSV---------IQGIFITHTHSDHVSGLKVFTKKYHI 75 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PV+A + +L A + ++ ++ +G +S+++ H P + I Sbjct: 76 PVFAQRTNLEILAA----DGKLDPSCDVTEVDSGEIAIGDYSVKAFATFHDTPASCGYQI 131 Query: 154 RSPV-GNIVHTGDWKLDDDAILGD--VTDKDSLCAIGNEGIL----ALMCDSTNAMREGT 206 +P + D + + D L + +E +L + Sbjct: 132 NTPDGKKVCVCTDLGTVTNEVDMHLSGCDLVLLESNYDESMLKNGSYPYELKRRIASDHG 191 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 +S + + +M+ ++ S Sbjct: 192 HLSNSDCGEQLKKLMRAGTYKFILGHISQE 221 >gi|167032379|ref|YP_001667610.1| beta-lactamase domain-containing protein [Pseudomonas putida GB-1] gi|166858867|gb|ABY97274.1| beta-lactamase domain protein [Pseudomonas putida GB-1] Length = 477 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 116/388 (29%), Gaps = 40/388 (10%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + +S ++IDCG+ + PG + + + A+ Sbjct: 10 GGTRGVTGSCHQLHVDPSTS---LLIDCGLEQGSEAAPGAESAALGFD-----IQGIRAL 61 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQ 124 ITH H DH G + L + P+ S + LL K ++ Sbjct: 62 VITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLTISSEPAQVARYIDF 121 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D + F V H + R+ + + L Sbjct: 122 IRDLIVPLPFEQWHTLVEHPGLGCRIRLQRAGHLLGSAYVECDMQHGQSNSRYVFSGDLG 181 Query: 185 AIGN---------EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTT 232 A GN E L+ +ST R + + ++ ++ + D + A KG +L+ Sbjct: 182 ACGNPLLRPVQPPERADVLVLESTYGDRLHSHVDDR--RRRLEDAIDRALADKGTILIPA 239 Query: 233 FSSSVSRIRSIIDIAEQ--IGRKI------VLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 FS + R + ++ E + + G + I + + + E Sbjct: 240 FS--LGRTQEVLFELEDILHRKALLGTAGPAPDGEPIDWSQLPIILDSPLAQRITSVYRE 297 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIG 343 + E +A G S L + + + + I GN + + G Sbjct: 298 LHEYWNDEARARVAEGRDPLGFSQLISVDTHARHQQVVNYLKSTGRPAIVIAGNGMCSGG 357 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHP 371 I N L E G P Sbjct: 358 RIVNYLKAMLADPRHEVMFVGYQAKGTP 385 >gi|167037443|ref|YP_001665021.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115856|ref|YP_004186015.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856277|gb|ABY94685.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928947|gb|ADV79632.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 207 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 25/183 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +R+ I+ID P + L + +I + + I +TH H D Sbjct: 14 NCYIVS--DEETRETIVID-----PGEYLSEIQ------DYIGVNKLRVKYILLTHGHFD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGA 133 H G + +L V S +L K VY+++ I GD + G Sbjct: 61 HIGGVEELRKVTQAEVAISKEDAPMLLDPSLNLSKMVYKKIQCSAADILLNGGDILYFGK 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGI 191 ++IE + + I + + TGD D D+L + Sbjct: 121 YAIEVLHTPGHTKGGVCFKIDN----VCFTGDTVFKGSIGRYDFPGGDFDTLMDSIKNKL 176 Query: 192 LAL 194 L L Sbjct: 177 LVL 179 >gi|332971400|gb|EGK10358.1| metallo-beta-lactamase YycJ [Desmospora sp. 8437] Length = 269 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 21/217 (9%) Query: 28 SPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + R I++D G+S ++ L +D+ D + + AI +TH H DH L Sbjct: 17 VETERSRILVDAGLSGKQLENLLRSIDV---DPSTLQ-------AILVTHEHSDHVKGLG 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 +PVY + E F +++ ++ES ++H Sbjct: 67 VFARRYRLPVYMNEATW---ENLPSGVGQIPPEQQHVFATLATLELEDLTVESFPISHDA 123 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDV--TDKDSLCAIGNEGILAL----MCDST 199 E M + D + IL V D + + +L + Sbjct: 124 AEPMGFCFHHEGARLGLVTDTGYINRRILDKVAGCDALIFESNHDVNMLRMGRYPWNVKR 183 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + +I++ + + S Sbjct: 184 RILSDVGHLSNEDAGWALTEILRGNGEDIFLAHLSQD 220 >gi|321476964|gb|EFX87923.1| hypothetical protein DAPPUDRAFT_41973 [Daphnia pulex] Length = 350 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 40/332 (12%) Query: 67 NLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 N+ + F++H H DHY L +L P+Y S L+ K K Sbjct: 26 NVAGVSSYFLSHYHYDHYRGLG---KWLDKPLYCSQVTANLINLKIK----LKPGIVRVL 78 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDS 182 + + + + + NH P ++ + R P ++H GD++ + Sbjct: 79 PLNESRVIESIEVILIDANH-CPGSVMFLFRFPTGKVVLHVGDFRAHPSM--------ER 129 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSR 239 L + I L D+T +++ + I +++ +LV + ++ + Sbjct: 130 LYELKQRPIDELYLDTTYCDEHYELPAQEEVLSYIRRLVRRYALKYQKLLVICGTYTIGK 189 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + + AE++ K+ + + ++ + L ++ + Sbjct: 190 EKVFMMAAEELNSKVWAP-------TEKRRILNCLDDSKISSRLATSPLEASVHVVNMGD 242 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 ++ L LS + L A G + + + Sbjct: 243 VKPANLKNYLDSLSGSFTHILALNPTGWEYDGKMAAKG--------LDAISPKS--YYNS 292 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H +++KR ++ RP+ ++ Sbjct: 293 IFIHGVPYSEHSGFSEMKRFVRFFRPRKIIPT 324 >gi|310825780|ref|YP_003958137.1| metallo-beta-lactamase family protein [Eubacterium limosum KIST612] gi|308737514|gb|ADO35174.1| metallo-beta-lactamase family protein [Eubacterium limosum KIST612] Length = 262 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 11/138 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S+ ++ID G+ ++ + + L I +TH H DH + L Sbjct: 17 VSHSKTKLLIDAGL-----SGKRIEQALCAVDEL---PAQLGGILVTHEHRDHIHGVGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVYA+ + + F+ G +G IE+ +H E Sbjct: 69 SRRYDLPVYANFATWESMRDSL---GKIAEHNVRVFETGQAFVIGDLQIEAFNTSHDAVE 125 Query: 148 TMALVIRSPVGNIVHTGD 165 ++ I S ++ D Sbjct: 126 SVGFTIDSGCSSVGIATD 143 >gi|28209938|ref|NP_780882.1| beta-lactamase superfamily protein [Clostridium tetani E88] gi|28202373|gb|AAO34819.1| beta-lactamase superfamily protein [Clostridium tetani E88] Length = 261 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 16/143 (11%) Query: 28 SPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 S I+ID GV ++ L + + +L AI +TH H DH + Sbjct: 17 VSSKDTKILIDAGVAGKHIENSLKNI----------GENPNSLDAILVTHEHTDHIKGVG 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P+Y+ P EA K I F +++ I ++ H Sbjct: 67 VLSRRYDLPIYSHPLTW---EAMLPSIGKIKD-HNIRFIDEKYINIKDMDIHGYKIPHDA 122 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 + + S D Sbjct: 123 AYPLGFSLNSNNKKFCLATDLGY 145 >gi|229828297|ref|ZP_04454366.1| hypothetical protein GCWU000342_00355 [Shuttleworthia satelles DSM 14600] gi|229792891|gb|EEP29005.1| hypothetical protein GCWU000342_00355 [Shuttleworthia satelles DSM 14600] Length = 534 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 13/107 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + G K ++DCG+ G D+ + I Sbjct: 1 MKITFIGAAHEVTGSCHYVEAG----DKKFLVDCGM------EQGADIY--ENQEIPVNP 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 +L IF+THAH DH G L L+ ++++ L Sbjct: 49 SDLDYIFVTHAHIDHSGLLPLLYVHGFRGTIFSTEATRQLCNIMLKD 95 >gi|254428096|ref|ZP_05041803.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] gi|196194265|gb|EDX89224.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] Length = 257 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 72/234 (30%), Gaps = 29/234 (12%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N L + ++IDCG + + + + + L AI Sbjct: 7 GSGSKG-NATLV----LADDTLVLIDCGFTVKETE--------ARLGRLGLATDQLSAIL 53 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH + L + PVY+S + KR K + G +G Sbjct: 54 VTHEHGDHIRSAGALARKVGCPVYSSFGTASAVHDKRA---TLKGADWQEVRPGRAFSLG 110 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVTDKDSLCAIGNEG 190 A I V V H E + D D L + Sbjct: 111 AMEILPVLVPHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRECDALVLECNHDPQ 170 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +L A ++ + + + + +L ++V R++ ++ Sbjct: 171 LL--------ASGPYPSSLKRRVGGMLGHLSNDQAAALL---RQANVDRLQHLV 213 >gi|218233520|ref|YP_002369066.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218161477|gb|ACK61469.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 209 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|160938044|ref|ZP_02085401.1| hypothetical protein CLOBOL_02937 [Clostridium bolteae ATCC BAA-613] gi|158439038|gb|EDP16793.1| hypothetical protein CLOBOL_02937 [Clostridium bolteae ATCC BAA-613] Length = 265 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 24/182 (13%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+S K G++ + + ++ I ITH H Sbjct: 12 GNCIYIG----SDSTHLLVDAGISN-KRIQQGLNEI-----GLTGN--DVNGILITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +P+Y + + + A K VG +++ Sbjct: 60 DHIKGLGVLSRKYEIPIYGTRETLDEIAAA-GSLGKFDKGLLTPVCPDLDFMVGDLTVKP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 +++H +A +++ ++ D + D +G+ AL+ +S Sbjct: 119 FKIDHDAANPVAYRVQNGEKSVAVATDMG----HFDQYIID-------HLQGLDALLLES 167 Query: 199 TN 200 + Sbjct: 168 NH 169 >gi|160888253|ref|ZP_02069256.1| hypothetical protein BACUNI_00662 [Bacteroides uniformis ATCC 8492] gi|156862199|gb|EDO55630.1| hypothetical protein BACUNI_00662 [Bacteroides uniformis ATCC 8492] Length = 291 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 21/165 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 25 MKVKFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 68 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIPC 120 + + A+F+TH H DH A+ L L++P+Y + G+ + + E++ + Sbjct: 69 GISMEMIRAVFVTHDHADHIKAVGGLGEKLNIPIYTTARIHEGINRSYCMTEKLYSSVRY 128 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + Q + + F IES V H + + I D Sbjct: 129 LEKQ--QPMQLEDFHIESFEVPHDGTDNVGYCIEIGGKVFAFLTD 171 >gi|77919089|ref|YP_356904.1| exonuclease [Pelobacter carbinolicus DSM 2380] gi|77545172|gb|ABA88734.1| predicted exonuclease [Pelobacter carbinolicus DSM 2380] Length = 500 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 72/498 (14%), Positives = 137/498 (27%), Gaps = 76/498 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-DLPGVDLVFPDIT 59 M + G + + + I+IDCG+ + G +P+I Sbjct: 1 MMERFIQICHHGAMDGVTGSCHELRL---VEGPGILIDCGMFQGGEFSAGGASEEYPEIE 57 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYE------ 112 F + + A+ ITH H DH G + L + P+Y S + LL Sbjct: 58 FPVAH---IKALIITHVHLDHVGRIPYLMAAGFAGPIYCSEPSAALLPLVLEDAVKAALT 114 Query: 113 -----------RVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVG 158 ++ +I + + ++D G S + H I + + V Sbjct: 115 TDRQLLDKFLTKLISRIAPVPYGQWLEIDTGTHAQLSFKLQPAGH-ILGS--AFVECRVR 171 Query: 159 NIVHTGDWKLDD---------DAILGDVTDKDSLCAIGNEG------------------I 191 + D D T + I G Sbjct: 172 RCITVADLGPDKVTSPAKIIGTKAPSKKTSVNRDVRILFSGDLGAPYAPLLPAPRSPWRA 231 Query: 192 LALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSII----DI 246 L+ +ST R + K + I + +G +L+ FS + R + ++ DI Sbjct: 232 DLLVLESTYGDRLHEGRRARRAKLQEIVETALRDRGVLLIPAFS--IGRTQELLYELEDI 289 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + R G + + + + + E + RE + G Sbjct: 290 IHRNRRHFAAAGLPWEELEIILDS--PLASRFTTIYRELREFWDREASRRVRAGRHPLSF 347 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIGHIKNRLVEQGVRVIAEDAECPV 365 + + R E + I + + + G I N L + Sbjct: 348 EQMTVIHRHEDHLSAVDYLKRKARPCVVIAASGMCSGGRIVNYLKALLGDSRTDILFVGY 407 Query: 366 HVSGHPYPNDLKRMYQWIRPQ---VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 G + K P V++ + H V + + Sbjct: 408 QARGTAGRDIQKY-----GPHGGYVVIDGKHYDIRARIHTITGYSAHADQRNLVDFVRRM 462 Query: 423 RLFPDPIEIIDEVVHGLF 440 R+ P + ++ H Sbjct: 463 RVSPKEVRLVHGDRHARQ 480 >gi|319792856|ref|YP_004154496.1| beta-lactamase domain protein [Variovorax paradoxus EPS] gi|315595319|gb|ADU36385.1| beta-lactamase domain protein [Variovorax paradoxus EPS] Length = 258 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 16/143 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N AL S +++DCG G+ + + Sbjct: 2 LRFRSLG-SGSTG-NAALVEATSGGRTSRLLVDCG--------FGIRQLDQRLAQAGLVA 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ AIFITH H DH G H L +PV+ S + + Sbjct: 52 GDIDAIFITHEHGDHIGCAHTLSRRNRIPVWMSEGTW------LATGGRDFEGRLNLARD 105 Query: 126 GDKVDVGAFSIESVRVNHSIPET 148 + VG ++ V H E Sbjct: 106 DAEFAVGDIGVQPFTVPHDAREP 128 >gi|317130978|ref|YP_004097260.1| hypothetical protein Bcell_4302 [Bacillus cellulosilyticus DSM 2522] gi|315475926|gb|ADU32529.1| hypothetical protein Bcell_4302 [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 11/143 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++ID G+S + I ++L I +TH H DH + Sbjct: 17 IYVETGNQKLLIDAGLS--------GKKIENCFKQINISPESLDGILVTHEHSDHIKGVG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P+YA+ +E + ++ F+ G+ G +ES V+H Sbjct: 69 ILARRYDLPIYANDKTWKAMEGLLGNIPIEQRFH---FEIGETKLFGDIDVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 E M + + D Sbjct: 126 AEPMFFTFQHSGRKLALVTDTGY 148 >gi|28210685|ref|NP_781629.1| cleavage and polyadenylation specificity factor [Clostridium tetani E88] gi|28203123|gb|AAO35566.1| cleavage and polyadenylation specificity factor [Clostridium tetani E88] Length = 506 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 65/516 (12%), Positives = 146/516 (28%), Gaps = 87/516 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIM 62 ++ F G + + L K I++DCG+ + G + F Sbjct: 1 MKIEFF--GAASCVTGSCHLV----KIKDKKILLDCGLYQGKDEKERGNET----FNF-- 48 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 K + + ++HAH DH G + L+ V + L + +++ Sbjct: 49 -NPKEIDYVILSHAHIDHSGRIPLLYKKGFKGRVICTEGTKDLSSIMLLDSGHIQEMETE 107 Query: 122 S-------------------------------FQAGDKVD-VGAFSIESVRVNHSIPETM 149 + ++ I H + + Sbjct: 108 WTNRKRMRLGQQPVEALYTSKIAELSLYLFDGYPYNQWIELFDGLKIRFRDAGHLLGSAI 167 Query: 150 ALVI---RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 ++ +V++GD I+ D + L+ ++T R Sbjct: 168 VELLINENEKDTKLVYSGDLGNKGKPIIK---DPSIIEE-----ADYLILETTYGDRLHE 219 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG- 258 + +++ + I + V S +V R + ++ + K+ + Sbjct: 220 NLD-TDLRELVDIIKMTFQRGGNVVIPSFAVGRTQEVVYALNKYVENNLLKDIKVYVDSP 278 Query: 259 ---------SSLKRVVSV-AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + A ++ I + L F P E + + + SA Sbjct: 279 LAYESTEVFRKFTKYYDKEACNLLISGDNPLDFEGLKFTKSPEESVQINKIKNGAIIISA 338 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPV 365 G +++ L SS G + I + + + Sbjct: 339 SGMCEAGRIKH-HLKHNLWRKESSIVFVGYQAEGTLGRKILDGAKRVKIFGEEIAINAKI 397 Query: 366 H----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 + +SGH N L + Q + RP+ ++ +HG+P ++ KEL + Sbjct: 398 YNLQGLSGHADKNGLFKWIQAMDRRPKAILLVHGDPESQLSFKELLDSKKYNSFIMKSGD 457 Query: 420 KMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 + + + + + L + + Sbjct: 458 SFIPGQENEEKSMIKENVINLLHSLNDVDNIDKDTL 493 >gi|291522835|emb|CBK81128.1| Zn-dependent hydrolases, including glyoxylases [Coprococcus catus GD/7] Length = 209 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G + N L + +++ +++D P D+ + V + L AI + Sbjct: 11 LGMVATNCYLI--INKENKEALLVD-----PADNALRISNVI------EENGCTLKAILL 57 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLE 106 TH H DH AL+DL +VPVYA +L+ Sbjct: 58 THGHFDHIMALNDLKKRYNVPVYAHEEEEDVLK 90 >gi|74317118|ref|YP_314858.1| hypothetical protein Tbd_1100 [Thiobacillus denitrificans ATCC 25259] gi|74056613|gb|AAZ97053.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 252 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 21/163 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + G+ +++DCG + + + + + Sbjct: 1 MRFASLGSGSE--GNGLVVEAGATR----VLMDCGFGLAESTV--------RLARLGLKP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L AI +TH H DH G + L +PV + + + + + Sbjct: 47 GDLAAIVVTHEHSDHIGGVGRLARKYKLPVRLTAGTLAMAND-------LAGVTVEVIDS 99 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + I+ V H E + V + D Sbjct: 100 HAAFALDDLEIQPFPVPHDAREPVQFVFGDGQRRLGVLTDAGC 142 >gi|189499778|ref|YP_001959248.1| beta-lactamase domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495219|gb|ACE03767.1| beta-lactamase domain protein [Chlorobium phaeobacteroides BS1] Length = 462 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 90/289 (31%), Gaps = 62/289 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F G I + + + I++DCG+ +++ ++ Sbjct: 1 MELEFY--GATSRITGSCHILRI----DGRRILLDCGLVQGREEEEALNREPFPFDPRE- 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL----------------- 105 + A+ ++H H DH G + L PVY P L Sbjct: 54 ----IDAVVLSHGHIDHSGRVPLLVKKGFDGPVYTHPATRDLALVLLQDSARLNERDVRY 109 Query: 106 EAKRVYERVSK--------KIPCISFQAGDKVDVG-------AFSIESVRVNHSIPETMA 150 E + + + + + G +I H I + Sbjct: 110 ENRLRERKNMPLIEPLYTVEDVVRTVNLMQGLKYGVKKEILPGVTIRFQDAGH-ILGSAL 168 Query: 151 LVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + +V +GD D IL D ++ A++ +ST R Sbjct: 169 VELWLTEKGRTVKLVFSGDIGQYDSPILY---DPSTIAE-----ADAVILESTYGDRLHR 220 Query: 207 CISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 +E K I + I + G +LV FS + R + ++ + ++ Sbjct: 221 ERAETLKEIAEVI-RLADREGGNILVPAFS--IGRSQELLYLFAIYHKE 266 >gi|303229374|ref|ZP_07316164.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515910|gb|EFL57862.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 211 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 45/152 (29%), Gaps = 25/152 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + G N + G K +ID + + K Sbjct: 11 MPLGPL---GTNCYVI--GDKEQGKAFIIDP-------------ATIEVLDALKKHNLKP 52 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSK----KIPCI 121 A+ +TH H DH G + + VP+Y + L E K I Sbjct: 53 KAVLLTHGHGDHIGGVQGIVDAYDVPIYIHHNDVKYLSDPELNLSNYSNPSPITVKGRII 112 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 GD + GA + P + + Sbjct: 113 EVHEGDHITYGAIDLTVYETPGHTPGGVCYYM 144 >gi|303230726|ref|ZP_07317473.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514486|gb|EFL56481.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 211 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 25/152 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + G N + G + + +ID ++ + K Sbjct: 11 MPLGPL---GTNCYVI--GDKAQGEAFIIDP----ATTEVL---------EALKKHNLKP 52 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYE----RVSKKIPCI 121 A+ +TH H DH G + + VP+Y + L E ++ K I Sbjct: 53 KAVLLTHGHGDHIGGVQGIVDAYDVPIYIHHNDVKYLSDPELNLSNYSNPTPITVKGRII 112 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 GD + GA + P + + Sbjct: 113 EVHEGDHITCGAIDLTVYETPGHTPGGVCYYM 144 >gi|317152909|ref|YP_004120957.1| beta-lactamase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943160|gb|ADU62211.1| beta-lactamase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 293 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 49/231 (21%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM-AIFITHA 76 G N + + I++D G + G++L+ + IFI+H Sbjct: 23 GGNTTCIE-VRSDAGELIILDAGTGIRE---LGIELMAARP---------VKCHIFISHT 69 Query: 77 HEDHYGALHDLWSFL----HVPVYASPFAIGL--LEA---KRVYERVSK--------KIP 119 H DH L V +Y P + + +EA K++ I Sbjct: 70 HWDHIHGLPFFLPLFTPGNAVTLYGPPDPLAMTGIEAVLSKQMEYPHFPVRVAELRADIA 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + VD+G ++ ++ +NH + +R + TGD + + D Sbjct: 130 YRTLADRQAVDLGFATVSTLLMNHPAMD-FGCKVRCDGKTLFFTGDHEPYYNIYAPGDAD 188 Query: 180 KDSLCAIGNE----------GILALMCDSTNAMR-------EGTCISEKGI 213 + I +E G+ L+ D+ A G E+ + Sbjct: 189 FEEYGRIVDERNKALTDFLRGVDILVADAQYAEEEYRTRRGWGHSTFERTL 239 >gi|228960527|ref|ZP_04122176.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799127|gb|EEM46095.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 239 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEANWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|228941425|ref|ZP_04103976.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974356|ref|ZP_04134925.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228785406|gb|EEM33416.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818206|gb|EEM64280.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942043|gb|AEA17939.1| hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 209 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|228935582|ref|ZP_04098398.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824120|gb|EEM69936.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 221 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 18 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 121 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 166 >gi|228947975|ref|ZP_04110261.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811665|gb|EEM58000.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 239 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + + +GD Sbjct: 139 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASALFSGDVLF 184 >gi|152990668|ref|YP_001356390.1| RNA-metabolising metallo-beta-lactamase [Nitratiruptor sp. SB155-2] gi|151422529|dbj|BAF70033.1| RNA-metabolising metallo-beta-lactamase [Nitratiruptor sp. SB155-2] Length = 462 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 82/277 (29%), Gaps = 58/277 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + + + +IDCG+ D+ + + K + + Sbjct: 8 GAAEVVTGSCHFVKFDDGTKA---LIDCGMFQGLDEWK-------NYEPLGFNAKEIDYL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---------------------KR 109 +TH H DH G + L+ + A+ L++ +R Sbjct: 58 LVTHGHLDHVGRIPLLYKEGFRGKIIATAATFELMKIVLLDTAHLMQEDFETAFRKAQRR 117 Query: 110 VYERVSKKIPCI-------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 E + KK + G + + + I + L I Sbjct: 118 GEEDLVKKPLYTKRDVKAALKLPRRVVKYGQNIKLSPNIAVRYKDAGHIIGSAFLEIEYK 177 Query: 157 VG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 ++ +GD + TD S L +ST R E+ Sbjct: 178 DDGVHKKVIFSGDLGNRQVHLNPPPTDPTSARH--------LFIESTYGDRLHKN-YEES 228 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +K+ IM K V S ++ R + I+ I ++ Sbjct: 229 VKEFKEAIMMTLKRGGNVLIPSFAIERTQQILCILKE 265 >gi|225375610|ref|ZP_03752831.1| hypothetical protein ROSEINA2194_01235 [Roseburia inulinivorans DSM 16841] gi|225212589|gb|EEG94943.1| hypothetical protein ROSEINA2194_01235 [Roseburia inulinivorans DSM 16841] Length = 534 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 14/161 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG E+ + +G +++DCG+ D V+ P Sbjct: 1 MQIEFLGAAHEVTGSCHYVTFGDKH----VLVDCGMEQGPD--LYVNQEIP------VNA 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +F+THAH DH G L L++ ++A+ L ++ ++ Sbjct: 49 AAVDYVFVTHAHIDHSGLLPLLYNHGFRGQIFATEATTQLCNIMLKDSAHI-QMFEAEWR 107 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G + + + + + +IV D Sbjct: 108 NRKAKRAGKPEVVPMYDMNDAMGVLTHFVPCEYNSIVEICD 148 >gi|220934008|ref|YP_002512907.1| beta-lactamase domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995318|gb|ACL71920.1| beta-lactamase domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 260 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 21/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N + G R +M+DCG S + + L Sbjct: 9 IRFASLG-SGSRG-NCLVVQAG----RTRVMVDCGFSVAETERRLARLGLA--------P 54 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ A+ ITH H DH G+ V+ + L + A Sbjct: 55 EDIDAVLITHEHSDHVGSAAAFSRRHRRQVWLTAGTYDALRD-------TDFHALRIIHA 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + +G +I+ V H E V+ + D Sbjct: 108 HEPLALGDLAIDPYPVPHDAREPCQFVLSDGDRRLGLLTD 147 >gi|255530657|ref|YP_003091029.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343641|gb|ACU02967.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 265 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 23/184 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + R+ I++D G+S + + + + + + AIFI+H H Sbjct: 17 GNCYYVG----NEREAILVDVGISCRETEK--------RMFRLGLSMQKVKAIFISHEHT 64 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L + ++PVY SP + E ++ + + +G+ ++ Sbjct: 65 DHVKGLCTLAAKYNLPVYISPGTLSGCRFNLREELINY------LNNNETIQIGSLTVTG 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGILALMC 196 H E + V+ + D D L A + AL+ Sbjct: 119 FLKIHDASEPYSFVVACGETKVGVFTDIGEACDQLIFHFRQCHAAFLEANYD---DALLE 175 Query: 197 DSTN 200 S Sbjct: 176 KSAY 179 >gi|168208636|ref|ZP_02634261.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|170713182|gb|EDT25364.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] Length = 206 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 20/152 (13%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + ++ I++D P ++ ++ V + + Sbjct: 8 VGMYQANCYVV--IDEETKDCIIVD-----PGEEASRIESVI------ESLDAKPRMVLL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ L +P Y ++E K Sbjct: 55 THGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDN 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I+ + P + +I + + TGD Sbjct: 115 YEIKCLETPGHTPGGLCFLIDN----CLFTGD 142 >gi|229123800|ref|ZP_04252994.1| Metallo-beta-lactamase [Bacillus cereus 95/8201] gi|228659621|gb|EEL15267.1| Metallo-beta-lactamase [Bacillus cereus 95/8201] Length = 221 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 18 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 60 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 61 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 120 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 121 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 166 >gi|282899541|ref|ZP_06307505.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505] gi|281195420|gb|EFA70353.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505] Length = 512 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 143/443 (32%), Gaps = 55/443 (12%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 I++DCG + DI I +E + I+HAH DH L L Sbjct: 4 HRILLDCGAA--------------DIPSITQENSPADLVLISHAHPDHCRGLLSLNRAFP 49 Query: 93 -VPVYASPFAIGLLEAKRVYERVSKK-IPCISFQAGDKVDV-GAFSIESVRVNHSIPETM 149 +P+Y S LL ++ C + ++V +E H +P + Sbjct: 50 LLPIYTSEVTSKLLPLNWTELETTENLTFCQALPLRSPIEVEENLVVELFPAGH-LPGAV 108 Query: 150 ALVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-- 203 A+++ +++TGD+ L + ++ D L + + L+ + + Sbjct: 109 AILLTYQGPERDYKLLYTGDFFLSNSRLV----DGLRLEELRGLNLDVLLIEGSYGTSRH 164 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLGS 259 E I + I + + K VL+ T + + + ++ + I + G Sbjct: 165 PHRRHQENQIAERINRAIID-KSSVLLPTPALGLGQELLMLLRSHHNFTGQDIDIWVDGE 223 Query: 260 ---SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA----LAQL 312 + + + ++ + R ++ + S+ L Sbjct: 224 VGTGCDAYLELLSHLPASVQNFARHQPLFWDERVRPRVRRLKVEDLDTLGSSPCIVLTDY 283 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPY 372 + +K + + E + N LV+ ++A+ H Sbjct: 284 KSDLNKYIKHGNGASWVVLFP-----EKMASDLDNPLVQTETYLLAQ----------HSD 328 Query: 373 PNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEII 432 ++ +RPQ +V IHG+P +L L + V G ++ L I Sbjct: 329 GPGTTQLIHNLRPQHVVFIHGDPTYLADLTTLEELQNRYHVHSPPGGTLVELPIGETLIQ 388 Query: 433 DEVVHGLFLKDGFLIGKFADLGI 455 V + + + + + Sbjct: 389 SPVPEANYQGELTELETIITIIL 411 >gi|228916895|ref|ZP_04080457.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929306|ref|ZP_04092331.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830320|gb|EEM75932.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842719|gb|EEM87805.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 239 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 139 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 184 >gi|253998313|ref|YP_003050376.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|253984992|gb|ACT49849.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] Length = 254 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG N S I+ID G +++ + Sbjct: 6 LGCSGGIGGN---LRTTSLLVDDDILIDAGTGVGDLS--------------IEQMAKIDH 48 Query: 71 IFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI--- 121 +F+TH+H DH L + V ++ P + L+ + + Sbjct: 49 VFLTHSHLDHIACLPLMLDTVAGLREAPVTIHGLPETLHALKTHIFNWIIWPDFSAVPSE 108 Query: 122 --------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G V + SI + NH++ + + S G++V TGD Sbjct: 109 TSPLLRYAEVAQGKAVSLSGRSITPLPANHTVA-AVGYWLDSGAGSMVFTGD 159 >gi|257440848|ref|ZP_05616603.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] gi|257196720|gb|EEU95004.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] Length = 262 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N ++ G K+I+ID G GV + + + I +TH H Sbjct: 13 GNCSVVRTG----EKYIIIDMG--------KGVRTTSAALKELGLNISDCAGILVTHEHS 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +PVY + + L+A + + +G + DVG F + Sbjct: 61 DHVKGLATFLKKNPLPVYGADDTLDFLDA----NGIVPASCALRTLSGGEEDVGDFGVTM 116 Query: 139 VRVNHSIPETMALVIRSPVGNIV 161 +H +P + I +P + Sbjct: 117 FPTSHDVP-CVGYRIHTPDNKTM 138 >gi|229129540|ref|ZP_04258511.1| Metallo-beta-lactamase [Bacillus cereus BDRD-Cer4] gi|229152461|ref|ZP_04280653.1| Metallo-beta-lactamase [Bacillus cereus m1550] gi|228631069|gb|EEK87706.1| Metallo-beta-lactamase [Bacillus cereus m1550] gi|228654145|gb|EEL10012.1| Metallo-beta-lactamase [Bacillus cereus BDRD-Cer4] Length = 239 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +++ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEKQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYYT--KEANAVFSGDVLF 184 >gi|291520785|emb|CBK79078.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Coprococcus catus GD/7] Length = 533 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 67/461 (14%), Positives = 141/461 (30%), Gaps = 99/461 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G E+ + + ++ K I+IDCG+ K+ ++ P Sbjct: 1 MKLFFSGAAHEVTGS----KHYLEAAGKKILIDCGMEQGKNLYENQEIPVP--------A 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV-------------- 110 ++ +F+THAH DH G L L++ VY + L + + Sbjct: 49 SDVDYVFLTHAHIDHSGMLPLLYNQGFKGSVYTTEATQQLCQIMLLDSAHIQEFEAEWKN 108 Query: 111 -----------------YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALV 152 + V + + +K+ V I V H + + ++ Sbjct: 109 RKGKRAGIPPVVPIYTTEDAVGILQYFVPCRYEEKIQVCEGIEIRFVDAGH-LLGSASIE 167 Query: 153 IRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + + V +GD + I+ + + ++ +ST R Sbjct: 168 VWVTEQGVTKKLVFSGDIGNTNQPIIKNP--------HYIKDADYVIMESTYGDRSHGPR 219 Query: 209 SE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + K + I G V++ +F+ V R + ++ QI + ++ Sbjct: 220 PDYIKELTAIIQRTFDRG-GNVVIPSFA--VGRTQEMLYFIRQIKAEGLV---KNHDNFE 273 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN-VKLAEK 325 V +D + + + G Y + + +I G L + + ++ Sbjct: 274 VYVDSPLAVEATNVFNRNVPGYYDDDAMALIKQGINPISFPGLKTAVTSDDSIAINVSTT 333 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA--------------------------- 358 VI S+ + H+K+ L ++ Sbjct: 334 PKVIISASGMCDAGRIRHHLKHNLWRPECTILFVGYQSVGTLGRNLVEGATEVKLFGETI 393 Query: 359 ---EDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 + VSGH L + +P+ + +HGE Sbjct: 394 EVQAEITSLAGVSGHADCEGLMKWIGAFEKKPKRVFVVHGE 434 >gi|312868316|ref|ZP_07728516.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] gi|311096061|gb|EFQ54305.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] Length = 269 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 9/155 (5%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++ID G+ + + +I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKLLIDAGL-----SGKKITGLLAEID---RKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEATWKAMEGT-KYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V D D + G V D Sbjct: 130 AAAPQFYRFMKNGKSFVMLTDTGYVSDRLAGIVAD 164 >gi|229081520|ref|ZP_04214019.1| Metallo-beta-lactamase [Bacillus cereus Rock4-2] gi|228701827|gb|EEL54314.1| Metallo-beta-lactamase [Bacillus cereus Rock4-2] Length = 239 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDTFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|254417751|ref|ZP_05031475.1| RNA-metabolising metallo-beta-lactamase family [Brevundimonas sp. BAL3] gi|196183928|gb|EDX78904.1| RNA-metabolising metallo-beta-lactamase family [Brevundimonas sp. BAL3] Length = 504 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 6/84 (7%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + ++DCG F + + ++ +F+THAH DH G L L Sbjct: 4 DTDHGRFLVDCG-MFQGPKTLK----TLNYEAFPFDPASIDGVFLTHAHIDHSGLLPKLV 58 Query: 89 SF-LHVPVYASPFAIGLLEAKRVY 111 P+YA+ L E Sbjct: 59 RAGYRGPIYATRATRDLCEVMLAD 82 >gi|168701682|ref|ZP_02733959.1| beta-lactamase domain protein [Gemmata obscuriglobus UQM 2246] Length = 470 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 73/283 (25%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV-------SFPKDDLPGVDLVFPDITFIMKE 64 G + +M + ++ K +++DCG+ S+ ++ D F Sbjct: 17 GAAQTVTGSM----HRLDAAGKTLLLDCGLFQGKRAESYARNR---------DFPF---R 60 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSK- 116 +++ A+ ++HAH DH G L +L P+Y +P L AK E + Sbjct: 61 TRDIDAVVLSHAHVDHCGNLPNLVRRGFAGPIYCTPATRALAAVMLGDAAKIQEEDANYL 120 Query: 117 -----------------------KIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALV 152 + G +G + H + + + Sbjct: 121 NQKRDRGDAKVQPLYDARDVYRTLTKMQAVPYGKPFHIGKGIEVTFADAGH-LLGSATVH 179 Query: 153 IRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +R + TGD IL D + L+ +ST + Sbjct: 180 LRIGGPAGERRVTFTGDIGRPGLPILR---DPE-----PIPPCDLLITESTYGGHTHEHV 231 Query: 209 SEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 E + + ++ G V++ F+ V R ++++ Q Sbjct: 232 DETADKLGAVVRQTVERG-GRVVIPAFA--VGRTQTVVYFLHQ 271 >gi|114567949|ref|YP_755103.1| hypothetical protein Swol_2443 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338884|gb|ABI69732.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 285 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 22/165 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N L+ +G I++D G+S + + I Sbjct: 1 MKVHVLASGSTG----NAVLFQFG----ESKILVDAGIS--------CRRIENGLQAIGT 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L A+ +TH H DH L +PV+A P ++ ++ + K Sbjct: 45 RAGELDAVLLTHEHTDHIKGLDVFIRKYQLPVFARPATWSKIDCRKKFPGECIK------ 98 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G IE ++H + + V D + Sbjct: 99 ELEGTFSLGKVLIEPFAISHDAIDPVGFCFYYGKRKAVIATDLGM 143 >gi|297544509|ref|YP_003676811.1| beta-lactamase domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842284|gb|ADH60800.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 207 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 25/183 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +R+ I+ID P + + +I + + I +TH H D Sbjct: 14 NCYIVS--DEETRETIVID-----PGEYSSEIQ------DYIGINKLRVKYILLTHGHFD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGA 133 H G + +L V S LL K VY+++ I GD + G Sbjct: 61 HIGGVEELRKVTQAEVAISKEDAPLLLDPSLNLSKMVYKKIQCSAADILLNGGDILYFGK 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGI 191 ++IE + + I + + TGD D D+L + Sbjct: 121 YTIEVLHTPGHTKGGVCFKIDN----VCFTGDTVFKGSIGRYDFPGGDFDTLMDSIKNKL 176 Query: 192 LAL 194 L L Sbjct: 177 LVL 179 >gi|229589005|ref|YP_002871124.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229360871|emb|CAY47730.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 252 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 30/183 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LG + N L + ++++DCG S + + GV Sbjct: 1 MRFAVLGSGSQ--GNGTLVAH----DDTYVLVDCGFSLKETERRLLRLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L AI +TH H DH + L ++PVY S + + Sbjct: 45 --HPAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSRGTLRGMRKPIEPAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+++ +GA SI+ + V H E V D +L + D Sbjct: 97 --AGGEQLQIGALSIDVIAVAHDAQEPTQYVFSDGERRFGVLTDLGSYCAKVLDGYRNLD 154 Query: 182 SLC 184 +L Sbjct: 155 ALM 157 >gi|229047979|ref|ZP_04193555.1| Metallo-beta-lactamase [Bacillus cereus AH676] gi|228723436|gb|EEL74805.1| Metallo-beta-lactamase [Bacillus cereus AH676] Length = 209 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + ++PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFYIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEVFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|322389963|ref|ZP_08063503.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321143399|gb|EFX38837.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 285 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 9/155 (5%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++ID G+ + + +I ++ ++L AI ITH H DH + Sbjct: 35 SFYLETPKKKLLIDAGL-----SGKKITGLLAEID---RKPEDLDAILITHEHSDHIHGV 86 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 87 GVLARKYGMDLYANEATWKAMEGT-KYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHD 145 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V D D + G V D Sbjct: 146 AAAPQFYRFMKDGKSFVMLTDTGYVSDRLAGIVAD 180 >gi|255994595|ref|ZP_05427730.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] gi|255993308|gb|EEU03397.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] Length = 563 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 72/524 (13%), Positives = 139/524 (26%), Gaps = 98/524 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G + + L +++DCG ++ Sbjct: 1 MKIKFC--GAATGVTGSCHLIE----GEGHRVLLDCGQFQGGRAQEKLNAEPFPFD---- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI---- 118 + + ++HAH DH G L L ++ + LL ++ Sbjct: 51 -IDQIEDVVLSHAHIDHCGRLPLLVKRGFTGRIFCTDATADLLGVMLRDSAHIHQMEAEW 109 Query: 119 ---------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPETMA 150 + VD+ I H I + Sbjct: 110 QNRKNERAGRPLVEPLYTMEDAELALKQVVPILYDQLVDINDKMQIVFNDAGH-ILGSAI 168 Query: 151 LVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 I + IV TGD + D IL D T + ++ +ST R Sbjct: 169 TEIWVKERDKTSKIVFTGDLGVKDRPILRDPT--------IIKKADYVIMESTYGNRTHP 220 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + I K + I+ AK V + +V R + +I ++ ++ G L + Sbjct: 221 LRDAR-IDKLVDIIIDTAKKGGSVVIPAFAVGRTQELIYELKRYIKEGGKWGKRLLEIPF 279 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 ++F + ++ + + LS E + + + Sbjct: 280 YVDSPMATSATEIFKRNAQAFDKEARD-YILNGDNPLTIENLRFTLSSKESQAINFNKDP 338 Query: 327 TVIFSSRAI--------------------------PGNEVAIGHIKNRLVEQGVRVIAED 360 VI S+ + ++ + + + + Sbjct: 339 KVIISASGMCEAGRIRHHLKHNAWDPKSSIVFVGYQAQGTLGRNLLDGVKDIKLFGEKIH 398 Query: 361 AECPVH----VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 ++ SGH L +P+ + +HGE K + V Sbjct: 399 VNAKIYNLEGFSGHADMLGLLDWVGGFQRKPKKIFLVHGENESKDYLKGEIEKRYGYDVE 458 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKR 458 + L D IE VH D I + +R Sbjct: 459 AIHEVSEYELVGDSIEGTPSAVHEKT--DEEGI-----EVMRER 495 >gi|188997639|ref|YP_001931890.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932706|gb|ACD67336.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 212 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 33/173 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK + L PL N + +S+ ++ID G D F Sbjct: 1 MKVKTLTVGPL------AENCFIV--FDGNSKDAVVIDPG---------------ADGEF 37 Query: 61 IMKERKN--LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR------VYE 112 I+ E K+ + AI TH H DH G + L L+VP Y + L+ + + + Sbjct: 38 ILNELKDLNVKAILATHGHLDHIGQVGYLKEKLNVPFYMNKKDEFLINNEIFPNFAYIIK 97 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 V P + GD + G + + P + + + I+ GD Sbjct: 98 AVKCPSPDFDVKDGDVLKFGNLEFQVIETPGHTPGS--VCFFNEKEKIIFVGD 148 >gi|296876107|ref|ZP_06900161.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] gi|296432818|gb|EFH18611.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] Length = 285 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 9/155 (5%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++ID G+ + + +I ++ ++L AI ITH H DH + Sbjct: 35 SFYLETPKKKLLIDAGL-----SGKKITGLLAEID---RKPEDLDAILITHEHSDHIHGV 86 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 87 GVLARKYGMDLYANEATWKAMEGT-KYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHD 145 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + V D D + G V D Sbjct: 146 AAAPQFYRFMKDGKSFVMLTDTGYVSDRLAGIVAD 180 >gi|52141236|ref|YP_085592.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|51974705|gb|AAU16255.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] Length = 209 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---KNDQNECVIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDTVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 109 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 154 >gi|293365510|ref|ZP_06612219.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307703468|ref|ZP_07640410.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|291315878|gb|EFE56322.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307622875|gb|EFO01870.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] Length = 269 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K ++ I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKITSL--------LSEINRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|254445243|ref|ZP_05058719.1| metallo-beta-lactamase superfamily, putative [Verrucomicrobiae bacterium DG1235] gi|198259551|gb|EDY83859.1| metallo-beta-lactamase superfamily, putative [Verrucomicrobiae bacterium DG1235] Length = 263 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 19/137 (13%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGALHD 86 + ++ID G F + G+ + + + + AIF+TH H DH + Sbjct: 19 TENCKVLIDAG--FSCKRICGM---------LEERHIKPEEIDAIFVTHEHSDHIAGIST 67 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 ++A+P ++ K K + FQ G + + +IES + H Sbjct: 68 FSKKFGPKLFANPLTAKAIQPKLK-----TKPNWMLFQTGSQFEFRDLTIESFSIPHDAH 122 Query: 147 ETMALVIRSPVGNIVHT 163 + + S G+ + + Sbjct: 123 DPVGYKFTSGRGDDLFS 139 >gi|331266320|ref|YP_004325950.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326682992|emb|CBZ00609.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 269 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K ++ I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKITSL--------LSEINRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|323464368|gb|ADX76521.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 209 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P ++ +D I + K L+AI +THAH DH AL Sbjct: 16 YFVENDTEMILID-----PAGEIDKID------NKIKQSGKQLIAILLTHAHFDHIAALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ + VPVY L AK + A D +G F+I Sbjct: 65 DVLTRYDVPVYMHAEEFSFLTDPQKNGSAKFKDYGLPIITSQAEPHALDEGMQQIGQFNI 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 +++ P ++ V Sbjct: 125 QTLHTPGHSPGSLTYVFDEFA 145 >gi|228987509|ref|ZP_04147628.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772241|gb|EEM20688.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 239 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G V T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKFV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEEDWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 139 HIIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 184 >gi|332886275|gb|EGK06519.1| hypothetical protein HMPREF9456_00393 [Dysgonomonas mossii DSM 22836] Length = 274 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 26/249 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G N G ++ ++ID G+ G+ + + Sbjct: 10 KYKFFSLG-SGSSG-NCYYLG----TNEYGVLIDAGI--------GIRSIQKALREYGVS 55 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI--GLLEAKRVYERVSKKIPCIS 122 ++A+ +TH H DH + L ++PVYA+ + G+L + V + I Sbjct: 56 FDKIIAVLVTHDHADHIKTVGCLGDKYNIPVYATE-TVHNGILRNRAVRASLVHSRKVIE 114 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + F I + V H E + I V D D I + Sbjct: 115 KE--QTFSIREFQITAFDVPHDSIENVGYHIEFDEQTFVLVTDIGRITDTIKEYAAKANH 172 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L N L + ++ I + + + + +S ++ I Sbjct: 173 LVIEANYDEYMLQAG------KYPYYLKQRIGNGMGHLSNRLSAQFIASIYSENLQNI-W 225 Query: 243 IIDIAEQIG 251 + +++ Sbjct: 226 LCHLSQDNN 234 >gi|322391844|ref|ZP_08065309.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321145324|gb|EFX40720.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 269 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 17/181 (9%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + L G G + L + +K I++D G+S K ++ Sbjct: 1 MSDNGFKYSIL-ASGSSGNSFYL-----ETPKKKILVDAGLSGKKITSL--------LSE 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I ++ ++L AI ITH H DH + L + +YA+ +E Y Sbjct: 47 INRKPEDLDAILITHEHTDHIHGVGVLARKYGMDLYANEKTWQAMENS-KYLGKVDPSQK 105 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F+ G G IES V+H + V D + D A + + Sbjct: 106 HIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENA 165 Query: 179 D 179 D Sbjct: 166 D 166 >gi|306825163|ref|ZP_07458505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432599|gb|EFM35573.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 269 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K ++ I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKITSL--------LSEINRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|270292776|ref|ZP_06198987.1| VicX protein [Streptococcus sp. M143] gi|270278755|gb|EFA24601.1| VicX protein [Streptococcus sp. M143] Length = 269 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K ++ I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKITSL--------LSEINRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|196013719|ref|XP_002116720.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens] gi|190580698|gb|EDV20779.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens] Length = 375 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 41/328 (12%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + A F++H H DHY L+ + +Y + L+ E K Sbjct: 64 ITAYFLSHFHSDHYYGLN---KTFNAKLYCNKITANLVSRMLHVE----KQYITILPMHQ 116 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 V V + + NH P + V R +HTGD++ ++ + L + Sbjct: 117 SVVVDDVEVTLLDANH-CPGSAMFVFRLRNGSVHLHTGDFRASEEM--------EKLDIL 167 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN---AKGCVLVTTFSSSVSRIRSI 243 N I L D+T S+K + + + + LV + ++ + + Sbjct: 168 KNSVISELYLDTTYCDPSYDFPSQKFVLDYVLATVTDALKCNKRCLVACGTYTIGKEKVF 227 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + IA + K+ + L + ++ + S ++ I + S Sbjct: 228 LAIARALECKVYAQKNKLG-------TLQCLEIENFKTLFTSDPHSTFLHVLPIWSVSAK 280 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 R+ L Q + + ++ G R + Sbjct: 281 FLRNYLDQNADQFDCAIGFKPTGWTHTNNVTASG--------------IVARQYGSISIY 326 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++++R Q+ +P+ ++ Sbjct: 327 GVPYSEHSSYSEMRRFVQFTKPRKIIPT 354 >gi|46579941|ref|YP_010749.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602645|ref|YP_967045.1| beta-lactamase domain-containing protein [Desulfovibrio vulgaris DP4] gi|46449357|gb|AAS96008.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562874|gb|ABM28618.1| beta-lactamase domain protein [Desulfovibrio vulgaris DP4] gi|311234061|gb|ADP86915.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris RCH1] Length = 536 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 66/521 (12%), Positives = 144/521 (27%), Gaps = 80/521 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + + ++ IDCG+ + ++ D + Sbjct: 1 MKVQFLGAAQTVTGSCYMIE----ANGVRFAIDCGMHQGNTE---IEKRNDDTE--IYRP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++ +THAH DH G L + P+Y + LL +++ +Q Sbjct: 52 SDIAFFLVTHAHIDHTGLLPAMTRNGFTGPIYCTEPTADLLGIMLQDSAHIQEMEA-EWQ 110 Query: 125 AGDKVDVGAF-SIESVRVN----------------HSIPETMALVIRSPVGNIVHTGDWK 167 + G +E + +S + + + + + Sbjct: 111 SRKLSRNGRIKKVEPLYTTEDATRAAEMLRPVDYGNSFEPSPGIRVTYKDAGHILGSAFL 170 Query: 168 LDDDAILGDVTDKDSLCAIGNE------------GILALMCDSTNAMREGTCI--SEKGI 213 + G T +G L +ST R+ S + Sbjct: 171 ELEVTENGRPTRLVFSGDLGRPDALIVNDPQKAAPADYLFLESTYGDRDHKDPRFSRDEL 230 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV------------------ 255 + I N + ++ + + + + GR Sbjct: 231 AEAIAYSYGNGEKVIIPAFAVERTQEVLYTLYLLHKEGRLPADMPVFVDSPLAIRATEIF 290 Query: 256 -----LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ---LIVIATG--SQGEP 305 ++K++V D + + L+ + +I+ A+G + G Sbjct: 291 RKHPKYYDDNMKKLVDSGEDPLALPNLKYTLNTQDSQALNVRSGPAVIISASGMCNAGRI 350 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 + L ++ V R I + + N + +V + Sbjct: 351 KHHLRHNLWRPGASIVFVGYQGVGTPGRKIVDGNATV-RLFNEDIAVKAKVFTIGS---- 405 Query: 366 HVSGHPYPNDLKRMYQWI-RPQV-LVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 S H + + PQ+ + +HGE L + V + + Sbjct: 406 -FSAHAGQSQILEWVSAFAHPQMEVFLVHGEEKAQTTLAGLLRERFNLPVSIPGYLEEVT 464 Query: 424 LFPD--PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLS 462 L P + DE + FL+ + R++L+ Sbjct: 465 LKPGRESLHQTDEARAHPDVDWEFLLAETEGKVAQLRKRLA 505 >gi|166031184|ref|ZP_02234013.1| hypothetical protein DORFOR_00870 [Dorea formicigenerans ATCC 27755] gi|166029031|gb|EDR47788.1| hypothetical protein DORFOR_00870 [Dorea formicigenerans ATCC 27755] Length = 535 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 65/478 (13%), Positives = 134/478 (28%), Gaps = 104/478 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L + I++DCG+ PD + + Sbjct: 1 MKLTFI--GADHEVTGSCHLVEACGKN----ILVDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSK 116 ++ ++ I +THAH DH G + L H + + L + Sbjct: 41 NQEIPVASGDIDYILLTHAHIDHSGKIPMLCKQGFHGEIVTTFATSDLCNIMLRDSAHIQ 100 Query: 117 KIPCISFQAGDKVDVGA--------------------------------FSIESVRVNHS 144 + + G I V H Sbjct: 101 EFEAEWRNRKARRSGGPEYEPLYTMADADAAIKLLAPCDYDQRITLCDGIDIRFTDVGH- 159 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMR 203 + + A+ + G+I + D + + D + ++ +ST R Sbjct: 160 LLGSAAIEMWITEGDISKKIVFSGDVGNLDQPIIKDPKKVTE-----ADYILIESTYGDR 214 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLLGSSLK 262 + + + + + V S +V R + ++ +I + ++ + + Sbjct: 215 VHGDVRPDYVGEFTRILKETFDRGGNVVVPSFAVGRTQELLYFIREIKEKNLLPDYPNFE 274 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVK 321 V + + + + + L +I G L ++ E R + Sbjct: 275 VYVDSPLAIEATNVFNKNVKSC----FDEDALAIIEKGINPLVFPGLKTTITSDESRMIN 330 Query: 322 LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV------------------------- 356 K VI S+ + H+K+ L ++ + Sbjct: 331 FDTKPKVILSASGMCEAGRIRHHLKHNLWKKESTICFVGYQAVGTLGRKLIEGAECVKLF 390 Query: 357 -----IAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + E +SGH N L PQ + +HGE E + Sbjct: 391 GETVEVNAKIESLKGISGHADRNGLLDWLSGFENTPQHVFVVHGEDQVTDTFAEAITE 448 >gi|167045498|gb|ABZ10151.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine microorganism HF4000_APKG10H11] Length = 431 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 73/424 (17%), Positives = 146/424 (34%), Gaps = 55/424 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGV--DLVFPDITFIM 62 L LGG G++ + L S ++D GVS P V + V P + Sbjct: 3 LKMKFLGGAGQVEGSALLL----QSKNSNFLLDYGVSLGNHKGDPPVFPNHVSPKSLSGL 58 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG----LLEA----------- 107 + + DH GA+ L+ H+ Y + + L+ Sbjct: 59 SLSHSHL---------DHCGAIPHLYISGHMKCYITKPTLDQVSLLINDFLKISGNYLTY 109 Query: 108 -KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 ++ E++ ++F K+ F+I+ + H IP + ++I I++TG+ Sbjct: 110 ERKELEKMKSNSHFLNFNDEVKISNSPFTIKLLDAGH-IPGSSQIIINDGKHRILYTGNV 168 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 + + D + G + A++C+ST A +K K + + + Sbjct: 169 NSVETRL-QPTMDLN----YGE--LDAIICESTYAGTYHPER-KKEEKNFVNKVQEIVDN 220 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGR--KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 + + ++ R + I+ I + I + G ++K + + KD L Sbjct: 221 GGVAQIPAFAIGRSQEILLILTENNYKGNIYMDGMAVKAIDLYSTYDKQFVKDPDSLKRA 280 Query: 285 SFG----LYPREQLIVIATGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNE 339 ++ V G P L + + K+ + PG Sbjct: 281 LKRTILIRDSHDRNSVSGPGVIISPAGMLGGGTAIHYLSQIYDNPKNAIFMVGFQAPG-- 338 Query: 340 VAIGHIKNR--LVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEP 395 + + N + +G + + S H N +++++ I+ P V V +HGE Sbjct: 339 TSGYRLLNEKIIYLRGKKRKLKAEPYLFKFSSHIDQNGFEKLFKSIKGNPTVFV-MHGEE 397 Query: 396 LHLV 399 L Sbjct: 398 NKLD 401 >gi|158321392|ref|YP_001513899.1| RNA-metabolising metallo-beta-lactamase [Alkaliphilus oremlandii OhILAs] gi|158141591|gb|ABW19903.1| RNA-metabolising metallo-beta-lactamase [Alkaliphilus oremlandii OhILAs] Length = 546 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 69/469 (14%), Positives = 133/469 (28%), Gaps = 94/469 (20%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKER-----KNLMAIFITHAHEDHYGALHDLWS 89 +++DCG+ F + D+ + KE+ ++ + ++H+H DH G + L Sbjct: 26 VLLDCGL-FQGSE---------DLEELNKEKFHFDPSDIDFLLLSHSHIDHSGRIPKLVK 75 Query: 90 F-LHVPVYASPFAIGLLEAKR------------VYERVSKKIPCISFQAGDKVD------ 130 +Y + L E R K+ + V+ Sbjct: 76 EGFRGKIYCTKATKDLCEIMLVDSAHIQVSDTEWENRKGKRSGKAPVEPLYTVEDALLSL 135 Query: 131 --------------VGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDWKLDDDA 172 S+ H I + + + + IV +GD + + Sbjct: 136 RYFESVLYDQKVQINEEISVRFRDAGH-ILGSSIVELWIEENDDTVKIVFSGDLGMRNKP 194 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 ++ D + + L+ +ST R + EK ++K + I K V Sbjct: 195 LIH---DPEFIEE-----ADYLILESTYGNRTHENV-EKRVEKLVDVINKTVLRGGTVLI 245 Query: 233 FSSSVSRIRSIIDIAEQI-----------GRKIVLLGSSLKRVVSVAIDVGIIKKDQL-F 280 S +V R + +I +Q I + + D Sbjct: 246 PSFAVGRTQELIYELKQYYENNKELEQFMRVPIYIDSPMAISATQIFKRNSYAFNDTAKE 305 Query: 281 LSDESFGLYPREQLIVIA----------TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF 330 L E L + + SA + G +R+ L Sbjct: 306 LILSGDNPLDFENLYFVRDYKESMALNNSDFPKVIISASGMCTAGRIRH-HLKHNLWKAK 364 Query: 331 SSRAIPGNE---VAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPNDLKRMYQWI 383 +S G + +K+ + +H SGH + Q Sbjct: 365 NSVVFVGYQAVGTLGRILKDGATSVKILGENIAVLAEIHSIEGFSGHIDQPGILDWLQGF 424 Query: 384 --RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 +P+ + +HGE L EL + G + D ++ Sbjct: 425 KKKPKKIFLVHGEEDSLSTLSELINERYNIPTVIPNMGYTFEIEKDVLK 473 >gi|328949153|ref|YP_004366490.1| RNA-metabolising metallo-beta-lactamase [Treponema succinifaciens DSM 2489] gi|328449477|gb|AEB15193.1| RNA-metabolising metallo-beta-lactamase [Treponema succinifaciens DSM 2489] Length = 510 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 18/102 (17%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----PKDDLPGVDLVFPDITFIMKE 64 LG E+ + + + IMIDCG +F + D + FP Sbjct: 6 YSLGAAEEVTGS----RHILEIDGRSIMIDCG-AFQGRRAESDKKNREFSFP-------- 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 + ++ +THAH DH G L L +YA+P L Sbjct: 53 ADKVESVVLTHAHYDHCGLLPVLMKNGYDGTIYATPATRDLA 94 >gi|228923013|ref|ZP_04086306.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836646|gb|EEM81994.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 239 Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|319939368|ref|ZP_08013728.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] gi|319811354|gb|EFW07649.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] Length = 267 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 21/177 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G+S K ++ I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKRLLIDAGLSGKKITSL--------LSEIDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H+DH + L H+ +YA+ +E F+ Sbjct: 51 PEDLDAILVTHEHKDHIHGVGVLARKYHLDIYANQETWNAMEVAL---GKIDVSQKHIFE 107 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G IES V+H + + V D + D A + + D Sbjct: 108 MGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGIIENAD 164 >gi|225570711|ref|ZP_03779734.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] gi|225160538|gb|EEG73157.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] Length = 265 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 13/147 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G +++D G+ +D + + + + I ITH H Sbjct: 12 GNCIYVG----DDNTHLLVDTGI-----SKKRIDQGL---HTLGIKGEEIEGILITHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L VP+YA+ I ++ R+ + + D+ +G+ I+ Sbjct: 60 DHIQGLGVFSRKYEVPIYATGGTIEGIKCTNSIGRM-PEGLLHEIEVDDEFLLGSLKIQP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 ++H + I + D Sbjct: 119 FAISHDARQPSGYRIEGDNKAVAVATD 145 >gi|239826190|ref|YP_002948814.1| beta-lactamase [Geobacillus sp. WCH70] gi|239806483|gb|ACS23548.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 244 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 69/203 (33%), Gaps = 47/203 (23%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 GY +++DCG V + + L A+ ++H H DH Sbjct: 21 GYLFEHDEFRLLVDCGSGVLSKLQNYVSV------------EKLNAVIVSHYHHDHVADI 68 Query: 82 GALHD---LWSFLHV-----PVYASPFAIGLLE-AKRVYERVSKKIPCISFQAGDKVDVG 132 G L + L V P+Y PF G E A+ +E + +++ + VG Sbjct: 69 GPLQYARLIKKNLGVQLPVLPIYGHPFDQG--EFARLAHEGI---TEAVAYDPERSLQVG 123 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F I ++ H + A+ I + +V+T D + + Sbjct: 124 PFHITFMKTVHPVT-CYAMRITAGDATVVYTAD--------SSYLPEFAPFAE----NAD 170 Query: 193 ALMCDST-----NAMREGTCISE 210 L+C+ NA G SE Sbjct: 171 LLICECNFYAGQNAAPAGHMTSE 193 >gi|239637643|ref|ZP_04678615.1| putative metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|239596861|gb|EEQ79386.1| putative metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] Length = 207 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +K +++D P + D + + + K L AI +THAH DH GAL Sbjct: 16 YFIENDKKVLLVD-----PSSET---DKIV---KKLNQINKPLEAIILTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQA--GDKVDVGAFSI 136 D+ + +VPVY L K + + I +A +G F+ Sbjct: 65 DIINKYNVPVYMHKEEFDFLNDPEKNGTSKFKQYGMPQVISQAKPEALNEGPAQIGDFTF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P +++ V + + D ++L + + L Sbjct: 125 NVLHTPGHSPGSLSFVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIKDKLFEL 180 >gi|331086151|ref|ZP_08335233.1| hypothetical protein HMPREF0987_01536 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406310|gb|EGG85824.1| hypothetical protein HMPREF0987_01536 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 536 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 76/291 (26%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L + K I+IDCG+ PD + + Sbjct: 1 MKLTFI--GAAHEVTGSCHLLE----VNGKHILIDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------ 110 ++ + + +THAH DH G + L + + L + Sbjct: 41 NQEIPVAVGEIDYVLLTHAHIDHSGLIPLLAKRGFQGQIVTTFATADLCQIMLRDSAHIQ 100 Query: 111 -------------------------YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHS 144 + V+ + K+++ + V H Sbjct: 101 EFEAEWRNRKARRSGAELYEPLYTMEDAVNALQYFVPCDYDQKIELCEGVWVRFTDVGH- 159 Query: 145 IPETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + + ++ I IV +GD + I+ D ++ ++ +ST Sbjct: 160 LLGSASIEIWMCEDNVEKKIVFSGDVGNINQPIIK---DPKTVRE-----ADYVVIESTY 211 Query: 201 AMREGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 R + + I G V++ +F+ V R + ++ + Sbjct: 212 GNRLHGDEIPDYVGEFTRILRETFAKGGNVVIPSFA--VGRTQELLYFIRE 260 >gi|319902163|ref|YP_004161891.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides helcogenes P 36-108] gi|319417194|gb|ADV44305.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides helcogenes P 36-108] Length = 267 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++ F+ L G G N G + + I+ID G++ V + + Sbjct: 1 MKIRFISLASGSSG----NCYYIG----TEKYGILIDAGIA--------VRTIKKGLKEA 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC- 120 + + A+F+TH H DH A+ L LH+P+Y + E +++K+ Sbjct: 45 GISMEMIRAVFVTHDHADHIKAVGGLGEKLHIPIYT---TAQIHEGINKSYCMTEKLHTS 101 Query: 121 -ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F IES V H + + I D Sbjct: 102 AHYLEKQQPMQLEDFHIESFEVPHDGTDNVGYCIEIDGKVFSFLTD 147 >gi|319946570|ref|ZP_08020804.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319746618|gb|EFV98877.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 269 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+ + + +I ++ ++L AI ITH H DH + Sbjct: 19 SFYIETPKKKILVDAGL-----SGKKITGLLAEID---RKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G + G +ES V+H Sbjct: 71 GVLARKYGMDLYANEATWKAMEGS-KYLGKVDDSQKHLFEMGKTLTFGDLDVESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENAD 166 >gi|317050475|ref|YP_004111591.1| beta-lactamase superfamily hydrolase [Desulfurispirillum indicum S5] gi|316945559|gb|ADU65035.1| beta-lactamase superfamily hydrolase [Desulfurispirillum indicum S5] Length = 258 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 55/180 (30%), Gaps = 30/180 (16%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDIT 59 L L G G N AL + + +ID G++ + + GVD Sbjct: 1 MRLTVLASGSKG----NAALVE----TPKTRFLIDAGLNCKSLVQRLNSIGVD------- 45 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ AI ++H H DH VPVYA+ V Sbjct: 46 -----EHSIDAILLSHEHSDHVCGAGVFSRRFRVPVYATQLTGE-----CTVNSVGDFHQ 95 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG-NIVHTGDWKLDDDAILGDVT 178 + +G +E V+H + + I S ++ + D + I Sbjct: 96 FVPLHNSTSFSLGDAGVEVFSVSHDAADPVGFRISSLQNRHLCYVTDTGIYTSLIKQYAI 155 >gi|50550517|ref|XP_502731.1| YALI0D12166p [Yarrowia lipolytica] gi|49648599|emb|CAG80919.1| YALI0D12166p [Yarrowia lipolytica] Length = 603 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 111/365 (30%), Gaps = 54/365 (14%) Query: 68 LMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L I F++H H DHYG L W+ P++ +P L + K + + Sbjct: 225 LEGINLYFLSHFHADHYGGLRKSWNH--GPIFCTPITAALCKMKLGVQDEW----LVPIP 278 Query: 125 AGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 VG + NH P ++ SP VH GD++ + + + ++ Sbjct: 279 IHIPFCVGNDVEVIFFDANH-CPGAAVMLFTSPTKTAVHCGDFRANMNLV------REIK 331 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM----------------KNAKGC 227 + + + D+T S+ + + D ++ G Sbjct: 332 LKLKQRELDEVYLDTTYLGPSHAFPSQNRVVQVCADFCVRLNNLKMEQLEKAQRQSTIGR 391 Query: 228 VLVTTFSSSVSRIRSII----DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 ++ +S V ++R++ + I + ++ + I+K + Sbjct: 392 FFTSSPNSPVHQLRTLFVVGTYTIGKERLAIEIALRLGSKLFADTTKRRILKTFNDPVIS 451 Query: 284 ESFGLYPRE---QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIF-SSRAIPGNE 339 E P E L+ + + + L + V A AI NE Sbjct: 452 ELLTSDPLEAQVHLVPLGQTRKDQLFEHLKSFKPHFSKIVAFAPTGWSYRPPKSAIQANE 511 Query: 340 VA-------------IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 A +++N I + V S H +L+ + Sbjct: 512 QATDLRPSYYDFGDLEYNVENLDRNLERSAIEPVQKYNVPYSEHSSFVELRAFCLNMAAT 571 Query: 387 VLVAI 391 ++ Sbjct: 572 TIIPT 576 >gi|323484245|ref|ZP_08089613.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323694768|ref|ZP_08108926.1| VicX protein [Clostridium symbiosum WAL-14673] gi|323402397|gb|EGA94727.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323501205|gb|EGB17109.1| VicX protein [Clostridium symbiosum WAL-14673] Length = 263 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 13/149 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S I+ID G+S + + I +L I ITH H Sbjct: 10 GNCIYVG----SDETHILIDAGISN--------KRIEKGLNEIGVTGNDLDGILITHEHS 57 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L P+Y++ + + + +G I+ Sbjct: 58 DHIKGLGVLARKYGTPIYSTKETLEEI-GNVKSLGDYPRELFRPICHDVDFYIGDLEIKP 116 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R++H +A +++ ++ D Sbjct: 117 FRIDHDAANPVAYRVQNNRRSVAVATDMG 145 >gi|228980949|ref|ZP_04141252.1| Metallo-beta-lactamase [Bacillus thuringiensis Bt407] gi|228778740|gb|EEM27004.1| Metallo-beta-lactamase [Bacillus thuringiensis Bt407] Length = 239 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|302386457|ref|YP_003822279.1| RNA-metabolising metallo-beta-lactamase [Clostridium saccharolyticum WM1] gi|302197085|gb|ADL04656.1| RNA-metabolising metallo-beta-lactamase [Clostridium saccharolyticum WM1] Length = 532 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 69/477 (14%), Positives = 147/477 (30%), Gaps = 97/477 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + + +G E+ + I++DCG+ D VDL ++ Sbjct: 1 MKLMFIGAAREVTGSCHYLEAAGFK----ILVDCGMEQGIDKFENVDLPV---SYAE--- 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 + + +THAH DH G L +++ V ++ L ++ Sbjct: 51 --IDYVLLTHAHIDHAGMLPFIYARGFRGQVISTVATADLCGIMLKDSAHIQESEAEWKN 108 Query: 120 --------------------------CISFQAGDKVDV-GAFSIESVRVNHSIPETMALV 152 S+ +KV++ +I + V H + + ++ Sbjct: 109 RKARRAGLPEEEPLYGVNDAMGVLELFHSYDYNEKVELEDGITIRFIDVGH-LLGSASIE 167 Query: 153 IRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTC 207 + IV +GD + ++ D + + ++ + T R G Sbjct: 168 MWITEGRDSKKIVFSGDIGNKNKPLIR---DPEYIKE-----ADYVVMECTYGDRLHGVI 219 Query: 208 ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 I I + G V++ F+ V R + ++ + +I + ++ G V Sbjct: 220 PDHVSILAGIVQKTLDRGGNVVIPAFA--VGRTQELLYMFRRIKAEKLVAG---HNGFEV 274 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKD 326 +D + + D Y E ++ G L ++ E +N+ K Sbjct: 275 YVDSPLAVEATQVFKDNLVDCYDEETKELVMKGINPISFPGLKLSVTSEESKNINFNSKP 334 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE--------------------------- 359 VI S+ + H+K+ L ++ Sbjct: 335 KVIISAAGMCDAGRIRHHLKHNLWRPECTIVFTGYQSIGTLGRNLIDGCTEVRLFGETIQ 394 Query: 360 ---DAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 E +S H L +P+ + +HG+ + + ++L +EG Sbjct: 395 VEAHIEKMDGMSSHADMEGLIAWLNAFEEKPRQVFLVHGDDVVCNSFEQLLEKEGYR 451 >gi|255020925|ref|ZP_05292981.1| Metallo-beta-lactamase family protein, RNA-specific [Acidithiobacillus caldus ATCC 51756] gi|254969716|gb|EET27222.1| Metallo-beta-lactamase family protein, RNA-specific [Acidithiobacillus caldus ATCC 51756] Length = 460 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 60/468 (12%), Positives = 127/468 (27%), Gaps = 98/468 (20%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-------LMAI 71 N+ + + K ++IDCG+ +L D + + + + Sbjct: 10 RNVTGSCHLLEARGKRVLIDCGMFQGGREL--------D----EENADDFGFDPRSIDLL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIPC---- 120 +THAH DH G + L + + L A E ++ Sbjct: 58 LLTHAHLDHCGRIPLLAKRGFRGEIITTAATRELTRVVLLDSAHLQEEDAERRQRHANRH 117 Query: 121 ----------------------ISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPV 157 + + G +++ + H I + ++ I + Sbjct: 118 GEASAQPLYTTLDALNALEFFGRTAEYGQSLELAPGLTATFYDAGH-ILGSASIRIEAHG 176 Query: 158 ----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK-- 211 +I+ +GD A+L D +++ ++T R I Sbjct: 177 TGAPKSIIFSGDLGNAGRALLRDPQLPPR--------ADSVVMETTYGDRLHKPIEPSIA 228 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKR 263 + I D ++ G V++ TF+ + R + ++ + + L Sbjct: 229 ELFAAIRDTLQRG-GNVIIPTFA--LERAQELLFYLRRGIEEGELPQRLPVFLDSPMAIS 285 Query: 264 VVSVAIDVGIIKK-----------DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 + D L F + + + + Sbjct: 286 ATEIFRHHPECYGEEVDALFRKGQDPFALPGLRFVRETADSIALNRLVGGAVIMAGSGMA 345 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVHV-- 367 + G +R+ L SS G + + + +H Sbjct: 346 TGGRVRH-HLRHNLWRSDSSVVFVGYAARGTLARLLIDGARTVRLFGDEIPVHAQLHTIN 404 Query: 368 --SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACV 413 S H +L Q +RP + +HG+P + L + Sbjct: 405 GFSAHADQRELLAWQQALRPTRTILVHGDPDSMDTFAALLKDTEVNRP 452 >gi|124505029|ref|XP_001351256.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium falciparum 3D7] gi|3758842|emb|CAB11127.1| cleavage and polyadenylation specificity factor protein, putative [Plasmodium falciparum 3D7] Length = 1017 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 62/448 (13%), Positives = 134/448 (29%), Gaps = 87/448 (19%) Query: 51 VDLVFPDITFIMKERKNL----MAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGL 104 V+ D ++ K + + I+H H DH GAL + S L Sbjct: 149 VNSSITDKEKLINNLKRINEIIDCVIISHFHMDHIGALPFFTEILKYRGIILMSYPTKAL 208 Query: 105 L---------------EAKRVYERVS-----------KKIPCISFQAG------------ 126 E K ++ I CI Sbjct: 209 SPILLLDSCRVTDMKWEKKNFERQIKMLNEKSDELLNYNINCIKKDPWNINEDNIYNCID 268 Query: 127 --------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + ++G SI H + I ++++TGD+ D LG Sbjct: 269 KVIGLQINETFELGDMSITPYYAGH-VLGACIYKIEVRNFSVIYTGDYNTIPDKHLGS-- 325 Query: 179 DKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 I + + +ST A R SE + +++ + G VL+ F+ Sbjct: 326 -----ANIPSLNPEIFISESTYATYVRPTKKASELELCNLVHE-CVHKGGKVLIPVFA-- 377 Query: 237 VSRIRSI------------IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 + R + + I G + + ++ S I+ + ++ L D Sbjct: 378 IGRAQELSILLDDYWKKMKIHYPIYFGCGLTENANKYYKIYSSWINSSCMSNEKENLFDF 437 Query: 285 SF-----GLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN- 338 + Y E+ ++ + G + L+ + + ++ ++ + G Sbjct: 438 ANISPFLNNYLNEKRPMVLFATPGMLHTGLSLKA---FKAWAGNPQNLIVLPGYCVQGTV 494 Query: 339 -EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 I K ++ + + S H N ++++ + + P+ ++ +HGE Sbjct: 495 GHKLIMGEKQISLDGTTYIKVLCKIIYLSFSAHADSNGIQQLIKHVSPKNVIFVHGEKNG 554 Query: 398 LVAHKELALQEGIACVPPVRNGKMLRLF 425 + + + + G+ Sbjct: 555 MQKLAKYISNKHMINSMCPSLGQQCHFD 582 >gi|291529271|emb|CBK94857.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale M104/1] Length = 535 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 141/474 (29%), Gaps = 109/474 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 +G E+ + +G I+IDCG+ D V+ P + Sbjct: 6 IGADREVTGSCHYLTFGDTH----ILIDCGMEQGAD--LYVNQEIP------VNPSLIDY 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YERVSK--- 116 +F+THAH DH G L +++ ++A+ L + K Sbjct: 54 VFVTHAHIDHSGLLPLIYNHGFRGTIFATKATTDLCNIMLKDSAHIQEFEAEWKNRKARR 113 Query: 117 -------KIPCISFQAGDKVDVGAF------------SIESVRVNHSIPETMALVIRSPV 157 + + + V H + + ++ + Sbjct: 114 AGRPEVTPMYNVEDAQNVMQHFTPCDYNSVYEICPGLKVRFVDAGH-LLGSSSIEMWVTE 172 Query: 158 GN----IVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 N IV +GD + + D ++ +ST R + Sbjct: 173 ENVTKKIVFSGDIGNHNRPLIKDPQYVDSA----------DYVVMESTYGDRLHDTPPDY 222 Query: 212 GIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKRVVSVAI 269 ++ + + G +++ FS V R + ++ +I ++ + + + + Sbjct: 223 AVELSKVINATFTRGGNLVIPAFS--VGRTQEMLYFIRRIKTENLLPEHPNFEVYIDSPL 280 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEKDTV 328 V +SD + E + +I+ G L +S E + + +K V Sbjct: 281 AVEATNVFHENVSDC----FDEEAMELISAGINPIKFPGLRVAVSSDESKMINFDKKPKV 336 Query: 329 IFSSR----------------------------AIPGNEVAIGHIKN-----RLVEQGVR 355 I S+ +PG + N +L + + Sbjct: 337 IISASGMCEAGRIRHHLKHNLWRSDSTVLFVGYQVPG--TLGYALLNGAKKVKLFGEEIE 394 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 V A P +SGH N L I +P+ + +HGE + + Sbjct: 395 VRASIVNLP-GISGHADKNQLTEWLGAIKNKPEHVFIVHGEESTAESFANHVHE 447 >gi|73540808|ref|YP_295328.1| Beta-lactamase-like [Ralstonia eutropha JMP134] gi|72118221|gb|AAZ60484.1| Beta-lactamase-like [Ralstonia eutropha JMP134] Length = 262 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 30/240 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L ++ I++DCG G+ + + Sbjct: 2 MRFAFLGSGSE--GNSLLVESREGTTTTRILLDCG--------FGIRETARRLERLGVTP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L A+ +TH H DH G+ + + + VY S L ++ A Sbjct: 52 DQLDAVLVTHEHGDHVGSAYPFAARHDIAVYTSHGTW-LATQHMRGAALAD---VRVCGA 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 +G + V H E + V+ + D ++ + ++ Sbjct: 108 DHVFSIGGLQVLPYTVPHDAREPLQFVLSDGDARLGVLTDIGMETPYVTARLS------- 160 Query: 186 IGNEGILALMCDSTNA-----MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G+ AL+ + + ++ I ++ + +L S ++R+ Sbjct: 161 ----GVDALVLECNHDREMLRNSVYPASLKRRIGGDLGHLANEVAASILAQVSHSGLNRV 216 >gi|229111734|ref|ZP_04241282.1| Metallo-beta-lactamase [Bacillus cereus Rock1-15] gi|228671728|gb|EEL27024.1| Metallo-beta-lactamase [Bacillus cereus Rock1-15] Length = 209 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + ++PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFYIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEVFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|210616269|ref|ZP_03291019.1| hypothetical protein CLONEX_03240 [Clostridium nexile DSM 1787] gi|210149867|gb|EEA80876.1| hypothetical protein CLONEX_03240 [Clostridium nexile DSM 1787] Length = 206 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 30/172 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI-- 58 MK E+ LG + G N L + +++ ++ID + PD Sbjct: 1 MKIEK---YALGSL---GTNCYLVE--NEETKELVIIDP-------------AICPDYMI 39 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVS 115 +++ + AI +TH H DH + +PVY +L + Sbjct: 40 SYVKRIGYEPKAILLTHGHFDHVMGIEGWTKEFDIPVYIYKDEAAILRDPALNLSSMFGT 99 Query: 116 KKIPCISFQ--AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+K+ + ++ E + + ++ +GD Sbjct: 100 SYAYEKVTCLSDGEKLVLAGYTFEVIHTPGHTSGGCCYYV--KDEEVLFSGD 149 >gi|311029469|ref|ZP_07707559.1| Metallo-beta-lactamase family protein [Bacillus sp. m3-13] Length = 247 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 42/241 (17%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N A GY ++IDCG GV + + + + A+ ++H H D Sbjct: 16 NSATSGYLVEHENFKLLIDCGS--------GVLAQLQNYIEVTE----VDAVILSHYHHD 63 Query: 80 H---YGALHD--LWSFL------HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 H G L L SF +P+Y + + I++ Sbjct: 64 HVADIGPLQFARLISFYMGKSVTQLPIYGHQEDMQG----FSTLDHKEYTKGIAYDPSKT 119 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++VG F IE ++ H +P A+ + + G+ V+T D + I Sbjct: 120 LEVGPFKIEFLKTIHPVP-CYAMKVSTDEGSFVYTADTSYQESFIPF------------T 166 Query: 189 EGILALMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 +G L+C+ A ++G + + A+ L+ T + +++ A Sbjct: 167 KGTDLLICECNLYAHQDGKAAGHMNSHDA-AKVAQGAEVPQLLLTHLPHFGEVEQLVEEA 225 Query: 248 E 248 Sbjct: 226 A 226 >gi|313625274|gb|EFR95103.1| metallo-beta-lactamase family protein [Listeria innocua FSL J1-023] Length = 105 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 18/109 (16%) Query: 3 NEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ F L G G N L G + I+IDCG+S + G+ Sbjct: 12 TDQIRFSILASGSSG----NATLVETG----DQKILIDCGLS--GKKMEGL------FAQ 55 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 + ++ +L AI ITH H DH L L +P+YA+ ++ Sbjct: 56 VGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMI 104 >gi|166368779|ref|YP_001661052.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] gi|166091152|dbj|BAG05860.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] Length = 546 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 75/218 (34%), Gaps = 32/218 (14%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-LMAIFITHAHED 79 L G +++DCG++ D+ + + +K + +F +HAH D Sbjct: 30 CLLLTIGPYR----LLLDCGLA--------------DMQPLTQNKKPPVDLVFCSHAHSD 71 Query: 80 HYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD-VGAFSIE 137 H L L +PVYAS + LL + C + + ++E Sbjct: 72 HIRGLMALHQTYPQLPVYASEVTVQLLPLQWPDSAEEIGSFCQGWPWRSPIALFDDLTVE 131 Query: 138 SVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAILGD-VTDKDSLCAIGNEGIL 192 H +P ++ +++TGD+ L + ++ D G + Sbjct: 132 IFPAGH-LPGAAVVLFTYKTPKRTYKVLYTGDFSLSNFQLVEGLSIDLLR----GVSPDV 186 Query: 193 ALMCDSTNAMR-EGTCISEKGIKKNIYDIMKNAKGCVL 229 ++ S R EK + IY + + +L Sbjct: 187 LIIEGSYGTERHPHRRQQEKQLMNRIYHAIAEGQNVLL 224 >gi|148998655|ref|ZP_01826094.1| vicX protein [Streptococcus pneumoniae SP11-BS70] gi|147755492|gb|EDK62540.1| vicX protein [Streptococcus pneumoniae SP11-BS70] Length = 269 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + +S+K +++D G+S + + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETSKKKLLVDAGLS--------GKKIISLLAEINRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|291614746|ref|YP_003524903.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291584858|gb|ADE12516.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 20/148 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + G I++DCG S + + + + Sbjct: 1 MRFALLGSGSE--GNALVVQVGQTR----ILLDCGFSLSET--------VSRLARLGLQA 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L I +TH H DH + L +PV+ + + R + Sbjct: 47 EQLQGIVVTHEHGDHISGVSRLARKFGLPVWLTHGTL------RTQSAAFAGLSITEISP 100 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVI 153 + +G ++ V H E + V Sbjct: 101 HSRFSIGEVQVQPYPVPHDAAEPVQYVF 128 >gi|118444608|ref|YP_877919.1| metallo-beta-lactamase family protein [Clostridium novyi NT] gi|118135064|gb|ABK62108.1| metallo-beta-lactamase family protein [Clostridium novyi NT] Length = 199 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 23/181 (12%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + G+ +ID G D+ +I + ++ I +TH H Sbjct: 12 GANCYILIDGNEGC----IIDPG---GDADML-----IRNIDAL---NIDVKFILLTHGH 56 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER--VSKKIPCISFQAGDKVDVGAFS 135 DH G + +L +VPVY + + L+ ++ + + GD + +G Sbjct: 57 MDHTGGVQELKDRYNVPVYINENDLELMRKHSQVFGPIWNETEEDKTIKDGDVLKLGNLE 116 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGILA 193 I+ + P M+ V++ +V TGD D +L E ++ Sbjct: 117 IKCLETPGHTPGGMSFVVKD----VVFTGDTLFRGSVGRTDFPGGDHSALIRSIKEKLIV 172 Query: 194 L 194 L Sbjct: 173 L 173 >gi|119773637|ref|YP_926377.1| metallo-beta-lactamase family protein [Shewanella amazonensis SB2B] gi|119766137|gb|ABL98707.1| metallo-beta-lactamase family protein [Shewanella amazonensis SB2B] Length = 484 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 139/445 (31%), Gaps = 79/445 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G E+ + L + K +++DCG+ + +L A+ Sbjct: 9 GATEEVTGSCHLLE----LNGKRLLLDCGLLQGGKQQEARNREPFPFD-----PASLDAV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPCI 121 ++HAH DH G L L P+Y + L ER +KK Sbjct: 60 VLSHAHIDHSGRLPLLVKQGFSGPIYTHSATLDLCAILLKDAAMLQGRDTERQNKKRLKQ 119 Query: 122 SFQA----GDKVDVGAFSIESVRVNHSI---PETMALVIRSPVGNIVHTG--DWKLDDDA 172 + D+ DV + + + + P + G+I+ + + +LDD Sbjct: 120 GLEPLEALFDEQDVDIAMTRFIPLEYGMRLDPVPGVTITLRDAGHILGSALLELELDDGQ 179 Query: 173 ILGDVTDKDSLCAIGN---------EGILALMCDSTNAMREGTCISE--KGIKKNIYDIM 221 + L G E ++ +ST R + +K + Sbjct: 180 RQKRLVFSGDLGRAGMPILRDPDLVEAADLVLMESTYGNRLHRSWEATLEELKGIFAKAI 239 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------IVLLGSSLKRVVSVAIDVGI 273 +++G +L+ FS V R + ++ + + + +++ + Sbjct: 240 SDSRGNILIPAFS--VGRAQELLYLFHLNAKDWDLSRWTICLDSPMAIEATKVYIRHFPL 297 Query: 274 IKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LSRG-------E 316 + D + G +P + I + + + + Q + G E Sbjct: 298 MDDDFKRFVRQHPGKHPLLTDVAFIQSTDESIALNEVHQGLIIIAGSGMCNGGRIRCHLE 357 Query: 317 MRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHP 371 + + + PG + + + + + + D +H S H Sbjct: 358 HNLYRPECDVIICGYQAEGTPG-----RALVDGVDKLTINGQSIDVRARIHTVGGLSAHA 412 Query: 372 YPNDLKRMYQWI--RPQVLVAIHGE 394 +L R Y RP LV +HGE Sbjct: 413 DQAELLRWYHHFEGRPP-LVLVHGE 436 >gi|138894248|ref|YP_001124701.1| metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] gi|134265761|gb|ABO65956.1| Metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 244 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 83/245 (33%), Gaps = 40/245 (16%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---YG 82 Y +++DCG G + T + +L A+ ++H H DH G Sbjct: 22 YLFEHDGFRLLVDCGS--------GALAKLQNYTTVE----DLDAVILSHYHYDHIADIG 69 Query: 83 ALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 L + L P+Y E + + + I++ ++ VG F Sbjct: 70 PLQYARLIHKTLGADLPVLPIYGHTEDEEAFE-RLTHNGI---TEGIAYDPKGELAVGPF 125 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 SI ++ H +P A+ I + IV+T D + + +G L Sbjct: 126 SITFLKTVHPVP-CYAMRITAGDNTIVYTADSSYIPEFVPF------------AKGADLL 172 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI 254 +C+ + + + I + A L T + R +I+ A + R + Sbjct: 173 ICECNFYAGQNAAPAGHMTSEEAATIAEGAGVGELWLTHLPHIGRHEQLIEEAGRTFRGV 232 Query: 255 VLLGS 259 + L Sbjct: 233 IRLAR 237 >gi|71027091|ref|XP_763189.1| hypothetical protein [Theileria parva strain Muguga] gi|68350142|gb|EAN30906.1| hypothetical protein TP03_0171 [Theileria parva] Length = 678 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 79/563 (14%), Positives = 146/563 (25%), Gaps = 151/563 (26%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDLPG-- 50 M + ++ LG ++G + + + K ++ DCG +P L G Sbjct: 1 MSSVDITV--LGAGQDVGRSCIVVTF----PSKRVIFDCGAHCGFIDQRRYPDLQLLGDV 54 Query: 51 ---------VDLV---------FPDITFIMKERKN------------------------- 67 ++ V PD F + Sbjct: 55 NEYNYQLQLIESVKKEEFPVKSAPDDPFSHEYSDKGVIKQEFDKDTYMKNALKKALKNVT 114 Query: 68 --LMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAIGLL------------------ 105 + I+H H DH GAL L + P+Y + L Sbjct: 115 NSVDCSVISHFHLDHVGALPFLTEHIGYSGPIYLTYPTRALCPLLLRDSVQVTSTRTVPD 174 Query: 106 ----------------------------EAKRVYERVSKKIPCISFQAGDKVDV------ 131 K S K + Sbjct: 175 DPNTISSINASVKSLLNCHTNTTYNTDKRRKIEERTDPWGYSLNSVAECMKRSIPLQLRA 234 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 G ++ H + + +++TGD+ D LG + Sbjct: 235 TETVGNLNLVPYYAGH-VLGASMFLSECDGFKVLYTGDFNTIPDKHLGP-------AKVP 286 Query: 188 NEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 L+C+ST A R+ +E + ++D + N G VL+ F+ V R + + Sbjct: 287 TLEPDVLICESTYATFVRQSKRATEMELCTTVHDTLING-GKVLIPVFA--VGRAQELAI 343 Query: 246 IAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 I I G ++ + + + R L + Sbjct: 344 ILNNYWNNLSISFPIYFGGGLSEKATNYYKLHSSWTNNNSITNLRENPFSLRNLLQFDQS 403 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA-----IPGN---EVAIGHIKNRLVE 351 L + L ++S IPG + Sbjct: 404 FLNDNRPMVLFATPGMVHTGLSLKA--CKLWSQNPNNLILIPGYCVQGTVGNKLIAGEKT 461 Query: 352 QGVRVIAEDAECPVHV---SGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 + + +C V S H + ++ + IRP+ +V +HGE + + Sbjct: 462 IKTNIGVMNIKCKVRYLSFSAHADSPGILQLIKHIRPKNIVFVHGELESMKRFSKHINNT 521 Query: 409 GIACVPPVRNGKMLRLFPDPIEI 431 V NG+ ++ D + Sbjct: 522 LKIPVYYPCNGQTIKFTKDTSKN 544 >gi|328544305|ref|YP_004304414.1| Beta-lactamase domain protein [polymorphum gilvum SL003B-26A1] gi|326414047|gb|ADZ71110.1| Beta-lactamase domain protein [Polymorphum gilvum SL003B-26A1] Length = 533 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 66/505 (13%), Positives = 137/505 (27%), Gaps = 87/505 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L G+ +++DCG+ F V + + Sbjct: 3 VRLTFCGAARMVTGSCYLLDIGATR----LLVDCGL-FQGSKT--VKEL--NYRPFPFAA 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----- 119 ++ + +THAH DH G + LW PV+ + LL ++ Sbjct: 54 DSIDVVLLTHAHIDHAGLVPKLWRAGFRGPVHMTEGTRDLLSFMLPDSGHIQQYEVENLN 113 Query: 120 --------------------------CISFQAGDKVDVGA-FSIESVRVNHSIPETMALV 152 + VDV H I + ++ Sbjct: 114 RRNLRRGKQTVTPIYTQADAYACQETFQAHDYDVWVDVAPGVRARFWNAGH-ILGSASVE 172 Query: 153 IRSPVGN--------IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + ++ +GD + D ++ GI L+C+ST RE Sbjct: 173 LEIAPSQAGADEPLRLLFSGDIGPEH---KAFHPDPEA-----ASGIDHLICESTYGGRE 224 Query: 205 GTCISE--------KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 +++ + ++ + V + + ++++ + L Sbjct: 225 REHVTDEQRRLVLAREVRSALDSGGVLLIPAFAVERTQELIFDLMTLMESGGLNRVPVFL 284 Query: 257 LG----SSLKRVVSVAIDVGIIKKDQLFLS----DESFGLYPREQLIVIATGSQGEPRSA 308 + + + A D+ + L S + + L I G+ S Sbjct: 285 DSPLAIKATETFNAHADDLEHLSDRPHLLDNRWISYSETVEDSKALNRIGGGAIIIAASG 344 Query: 309 LAQLSRGEMRNVKL--AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + R TV+ P +++ + + Sbjct: 345 MCDAGRIRHHLKNRLWRPNTTVLLVGYQAPA--TLGAILRDGAQSVRIMGEEVKVRADIR 402 Query: 367 ----VSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKE--LALQEGIACVPPVRN 418 SGH +DL + +P + HGE VA ++ + V Sbjct: 403 SIDVYSGHAARDDLLDWVEERKPVRGSIFLTHGEESQSVAMRDALVGHGFAADNVVIPDL 462 Query: 419 GKMLRLFPDPIEIIDEVVHGLFLKD 443 + L P + + D Sbjct: 463 DAVYDLLPGRAIQRRDAAPPRAMPD 487 >gi|148549145|ref|YP_001269247.1| beta-lactamase domain-containing protein [Pseudomonas putida F1] gi|148513203|gb|ABQ80063.1| beta-lactamase domain protein [Pseudomonas putida F1] Length = 476 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 69/427 (16%), Positives = 128/427 (29%), Gaps = 54/427 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + G +S +++DCG+ D PG + + + + A+ Sbjct: 10 GGTRGVTGSCHQLHLGPSTS---LLVDCGLEQGSDAPPGAAS-----APLGFDIQGIQAL 61 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVS--KKIPCISFQAGDK 128 ITH H DH G + L + P+ S + LL P + D Sbjct: 62 VITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLSISSEPAQVARYLDF 121 Query: 129 VD--VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD--DDAILGDVTDKDSLC 184 + + E + G+++ + + D + L Sbjct: 122 IRDLIVPLPFEQWHTVVEYAGLACRIRLQRAGHLLGSAYVECDMQHEHTNTRYVFSGDLG 181 Query: 185 AIGN---------EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTT 232 A GN E L+ +ST R ++ ++ + + + A KG +L+ Sbjct: 182 ACGNPLLRPVQPPERADVLVLESTYGDRLHPQAGDR--RQRLENAIDRALADKGTLLIPA 239 Query: 233 FSSSVSRIRSIIDIAEQ--------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 FS + R + ++ E G + I + + + E Sbjct: 240 FS--LGRTQELLYELEDILHRKALLNTTGPAPDGEPIDWSQLPIILDSPLAQRITRVYRE 297 Query: 285 SFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIG 343 + E +A G S L + + + + I GN + + G Sbjct: 298 LHEYWNAEARARVAAGRDPLGFSQLISVDTHARHQQVVNYLKSTGRPAIVIAGNGMCSGG 357 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPY-------------PNDLKRMYQWIRPQVLVA 390 I N L E G P DL +R + +++ Sbjct: 358 RIVNYLKAMLGDPRHEVMFVGYQAKGTPGAVIQASEGAEGFVQIDLDGDMHDVRAK-VIS 416 Query: 391 IHGEPLH 397 +HG H Sbjct: 417 MHGYSGH 423 >gi|114332094|ref|YP_748316.1| cyclic-AMP phosphodiesterase [Nitrosomonas eutropha C91] gi|114309108|gb|ABI60351.1| cyclic-AMP phosphodiesterase [Nitrosomonas eutropha C91] Length = 254 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 35/177 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG + + + I+ID G L + + Sbjct: 6 LGCGGGIG---SDSHTTAMLLDEDILIDAGTGVGTLTL--------------DDLLRIDH 48 Query: 71 IFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 IF+THAH DH + L + V+A P + L+A + CI Sbjct: 49 IFVTHAHLDHIAFIPFLVDTAGSLRDRPLIVHALPSTLACLQAHIFNWHIWPDFSCIPDA 108 Query: 125 AG-----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 A + V +G+ I + H +P + + S ++V TGD DD Sbjct: 109 AHPYMRYEPVTVGEAVALGSRRITPLPACHIVP-AVGFQLDSGQSSLVFTGDTTADD 164 >gi|325662348|ref|ZP_08150957.1| hypothetical protein HMPREF0490_01696 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471350|gb|EGC74573.1| hypothetical protein HMPREF0490_01696 [Lachnospiraceae bacterium 4_1_37FAA] Length = 536 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 76/291 (26%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L + K I+IDCG+ PD + + Sbjct: 1 MKLTFI--GAAHEVTGSCHLLE----VNGKHILIDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------ 110 ++ + + +THAH DH G + L + + L + Sbjct: 41 NQEIPVAVGEIDYVLLTHAHIDHSGLIPLLAKRGFQGQIVTTFATADLCQIMLRDSAHIQ 100 Query: 111 -------------------------YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHS 144 + V+ + K+++ + V H Sbjct: 101 EFEAEWRNRKARRSGAELYEPLYTMEDAVNALQYFVPCDYDQKIELCEGVWVRFTDVGH- 159 Query: 145 IPETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + + ++ I IV +GD + I+ D ++ ++ +ST Sbjct: 160 LLGSASIEIWMCEDNVEKKIVFSGDVGNINQPIIK---DPKTVRE-----ADYVVIESTY 211 Query: 201 AMREGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 R + + I G V++ +F+ V R + ++ + Sbjct: 212 GNRLHGDEIPDYVGEFTRILRETFAKGGNVVIPSFA--VGRTQELLYFIRE 260 >gi|315641353|ref|ZP_07896429.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482926|gb|EFU73446.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 268 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 66/196 (33%), Gaps = 19/196 (9%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L G G ++ + S +K I+ID G+S K + Sbjct: 2 MKQNAFQVSIL-ASGSTGNSLYI-----ESEKKKILIDAGLSGKKITSL--------MQE 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + K L AIF+TH H DH + L H+P+YA+ EA Sbjct: 48 VGKTPAELDAIFVTHEHRDHIHGVGVLARKYHLPIYANEKTW---EAMAPLIGNVPVEQK 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F G + G IES V+H + V D + D + Sbjct: 105 FIFDMGATLTFGDLDIESFGVSHDAAAPQFYKFNKDGKSFVMLTDTGYCSDHVRGVIRNA 164 Query: 179 DKDSLCAIGNEGILAL 194 + + + + +L + Sbjct: 165 NAYLMESNHDLQMLRM 180 >gi|320535492|ref|ZP_08035598.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] gi|320147684|gb|EFW39194.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] Length = 468 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 18/111 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF----PKDDLPGVDLVFPDITFI 61 + LG E+ + + + +IDCG +F + D D P Sbjct: 3 IKMYSLGAAQEVTGS----KHMLEVDDELYLIDCG-AFQGRRAEADKKNRDFNVP----- 52 Query: 62 MKERKNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVY 111 L A+ +TH H DH G L L +YA+P + + Sbjct: 53 ---ADKLTAVILTHGHYDHCGLLPLLSIHGFKGNIYATPATRDIANLILMD 100 >gi|315613220|ref|ZP_07888130.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315314782|gb|EFU62824.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 269 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKISSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|167040927|ref|YP_001663912.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|300913864|ref|ZP_07131181.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307725452|ref|YP_003905203.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] gi|166855167|gb|ABY93576.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|300890549|gb|EFK85694.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307582513|gb|ADN55912.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] Length = 259 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 15/136 (11%) Query: 35 IMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 I+ID G+S + L + V P K+L AI ITH H+DH L + Sbjct: 24 ILIDAGLSGRTIEKALFNI-GVTP---------KSLSAILITHEHKDHIIGAGVLSRRYN 73 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +P+YA+ ++E K+ + + ++G I + H E + Sbjct: 74 IPIYANKATWEVMEKDIKEISEKNKLYFTTGEE---FEIGDVKIMPFKKPHDAVEPVGFS 130 Query: 153 IRSPVGNIVHTGDWKL 168 + I D Sbjct: 131 FKCGDKKISIATDLGY 146 >gi|298505954|gb|ADI84677.1| RNA exonuclease, beta-lactamase fold [Geobacter sulfurreducens KN400] Length = 475 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + + I+IDCG+ D G P I F + + Sbjct: 7 GGKFGVTGSCHELAI---TDSAAILIDCGLPQGSDGNGG--KRLPFIDF---PLDRVKGL 58 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 +TH H DH G + L P++ S + LL Sbjct: 59 VLTHVHIDHCGRIPHLLGAGFQGPIWCSEASALLL 93 >gi|315221422|ref|ZP_07863343.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] gi|315189541|gb|EFU23235.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] Length = 267 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 21/177 (11%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + L G G N + + +K ++ID G+S K ++ I ++ Sbjct: 7 KYSILASGSTG----NC----FYLETPKKKLLIDAGLSGKKITSL--------LSEIDRK 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++L AI +TH H+DH + L H+ +YA+ +E F+ Sbjct: 51 PEDLDAILVTHEHKDHIHGVGVLARKYHLDIYANQETWNAMEVAL---GKIDVSQKHIFE 107 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 G G IES V+H + + V D + D A + + D Sbjct: 108 MGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGIIENAD 164 >gi|119477024|ref|ZP_01617305.1| Beta-lactamase-like protein [marine gamma proteobacterium HTCC2143] gi|119449831|gb|EAW31068.1| Beta-lactamase-like protein [marine gamma proteobacterium HTCC2143] Length = 254 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 20/153 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N L S+ ++IDCG + + + + + + +++ AI Sbjct: 9 GSGSRG-NATLI----KSANALLLIDCGFTIKETER--------RLHNMGHQPQDIDAIL 55 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH + +PVY + Y+ + K +G Sbjct: 56 VTHEHSDHIKGVGPFARKYQLPVYLTHGTG-------QYDGLKKITRMHHINTHRPFFIG 108 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + V V H E V R D Sbjct: 109 DIEVTPVTVPHDAREPCQFVFRHDNKTAGVLTD 141 >gi|238924601|ref|YP_002938117.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale ATCC 33656] gi|238876276|gb|ACR75983.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale ATCC 33656] Length = 535 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 141/474 (29%), Gaps = 109/474 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 +G E+ + +G I+IDCG+ D V+ P + Sbjct: 6 IGADREVTGSCHYLTFGDTH----ILIDCGMEQGAD--LYVNQEIP------VNPSLIDY 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YERVSK--- 116 +F+THAH DH G L +++ ++A+ L + K Sbjct: 54 VFVTHAHIDHSGLLPLIYNHGFRGTIFATKATTDLCNIMLKDSAHIQEFEAEWKNRKARR 113 Query: 117 -------KIPCISFQAGDKVDVGAF------------SIESVRVNHSIPETMALVIRSPV 157 + + + V H + + ++ + Sbjct: 114 AGRPEVTPMYNVEDAQNVMQHFTPCDYNSVYEICPGLKVRFVDAGH-LLGSSSIEMWVTE 172 Query: 158 GN----IVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 N IV +GD + + D ++ +ST R + Sbjct: 173 ENVTKKIVFSGDIGNHNRPLIKDPQYVDSA----------DYVVMESTYGNRLHDTPPDY 222 Query: 212 GIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKRVVSVAI 269 ++ + + G +++ FS V R + ++ +I ++ + + + + Sbjct: 223 AVELSKVINATFTRGGNLVIPAFS--VGRTQEMLYFIRRIKTENLLPEHPNFEVYIDSPL 280 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEKDTV 328 V +SD + E + +I+ G L +S E + + +K V Sbjct: 281 AVEATNVFHENISDC----FDEEAMELISAGINPIKFPGLRVAVSSDESKMINFDKKPKV 336 Query: 329 IFSSR----------------------------AIPGNEVAIGHIKN-----RLVEQGVR 355 I S+ +PG + N +L + + Sbjct: 337 IISASGMCEAGRIRHHLKHNLWRSDSTVLFVGYQVPG--TLGYALLNGAKKVKLFGEEIE 394 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 V A P +SGH N L I +P+ + +HGE + + Sbjct: 395 VRASIVNLP-GISGHADKNQLTEWLGAIKNKPEHVFIVHGEESTAESFANHVHE 447 >gi|170723134|ref|YP_001750822.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169761137|gb|ACA74453.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 252 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 62/182 (34%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --QASQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 GD + +G + + RV H E + VI D D +L D Sbjct: 97 --ACGDSLSIGCLQVSAARVEHDAYEPLQYVISDGRRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|94501029|ref|ZP_01307553.1| Beta-lactamase-like protein [Oceanobacter sp. RED65] gi|94426776|gb|EAT11760.1| Beta-lactamase-like protein [Oceanobacter sp. RED65] Length = 262 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 50/145 (34%), Gaps = 22/145 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAI 71 G G G N L Y ++ID G + + ++ + P +L AI Sbjct: 7 GSGSKG-NGTLVAY----RSTRVLIDNGFTLKEFENRLARKGLTP---------LDLSAI 52 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 ITH H DH + L +PVYAS Y + F + + Sbjct: 53 LITHEHSDHIKGVGPLARKYRIPVYASHGTA-------QYHGLGDIPSLRIFDSHGDFVI 105 Query: 132 GAFSIESVRVNHSIPETMALVIRSP 156 G I V V H E VI++ Sbjct: 106 GDLQISPVVVPHDAREPTQFVIKNN 130 >gi|78356824|ref|YP_388273.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219229|gb|ABB38578.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 535 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 66/517 (12%), Positives = 140/517 (27%), Gaps = 77/517 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + + G +DCG+ ++ + + Sbjct: 1 MKVQFLGAARTVTGSCYVVESGGVR----FAVDCGMHQGNHEIEKRNYETDVYS-----P 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 + + ITHAH DH G L + PVY + LLE Sbjct: 52 ETIDFFLITHAHIDHTGLLPRMVRDGFTGPVYCTEPTRDLLEIMLQDSANIQEMEAEWQT 111 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM--ALVIRSPVGNIVHTGDWKLD 169 + +K D S V ++ P + + + + + Sbjct: 112 RKQKRKGRKPVDPLYTFADAARVSRFFENVEYNRPFSPVEGVTVTYKDAGHILGSAFLEI 171 Query: 170 DDAILGDVTDKDSLCAIGNEGILA------------LMCDSTNAMREGTCISEK--GIKK 215 + G + +G L L +ST R S + + Sbjct: 172 EVCEHGRCSRLIFSGDLGKPNSLIVRDPEAAAAADYLFVESTYGDRNHKDESNSRQELAE 231 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV-------------------- 255 I + + ++ + + + ++ GR V Sbjct: 232 AIAYSYRQGEKVIIPAFAVERTQEVLYTLFLLQKEGRMPVDMPIFLDSPLAIRATEIFRK 291 Query: 256 ---LLGSSLKRVVSVAID---VGIIKKDQLFLSDESFGLYPREQLIVIATG--SQGEPRS 307 +++++ D + ++ ++ Y +I+ A+G + G + Sbjct: 292 HPRFFDEEMQKLLLSGEDPFAMPSLRLTTKTQESQAINNYTGPAVIISASGMCNAGRIKH 351 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 L ++ V R I +I + + +V Sbjct: 352 HLRHNIWRPGASIVFVGYQAVGTPGRRIVDGARSI-RLFGEEIAIQAKVFTIGG-----F 405 Query: 368 SGHPYPNDLKRMYQ--WIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLF 425 SGH + + + + +HGE A K + ++ V + + L Sbjct: 406 SGHAGQSQILDWVGKFATKEMKVFLVHGEEKAQQALKAILEEKYELSVHSPGYLEEIELE 465 Query: 426 PDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQ 460 P D + L FL+ + + R + Sbjct: 466 PGEAVVTTGDPQRYQPQLNWDFLLSETEARMMQLRAR 502 >gi|295401110|ref|ZP_06811084.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112114|ref|YP_003990430.1| beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294976903|gb|EFG52507.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217215|gb|ADP75819.1| beta-lactamase domain protein [Geobacillus sp. Y4.1MC1] Length = 244 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 69/203 (33%), Gaps = 47/203 (23%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 GY +++DCG GV + + L A+ ++H H DH Sbjct: 21 GYLFEHEGFRMLVDCGS--------GVLAKLQNYVSVE----KLDAVVVSHYHHDHVADI 68 Query: 82 GALHD---LWSFLHV-----PVYASPFAIGLLE-AKRVYERVSKKIPCISFQAGDKVDVG 132 G L + L PVY PF G E A+ +E + I++ + VG Sbjct: 69 GPLQYARLIKKNLGAPLPALPVYGHPFDQG--EFARLAHEGI---TEAIAYDPEQPLQVG 123 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F I ++ H + A+ I + +V+T D + + Sbjct: 124 PFHITFMKTVHPVT-CYAMRITAGDATVVYTAD--------SSYLPEFAPFAKDA----D 170 Query: 193 ALMCDST-----NAMREGTCISE 210 L+C+ NA G SE Sbjct: 171 LLICECNFYAGQNAAPAGHMTSE 193 >gi|196000276|ref|XP_002110006.1| hypothetical protein TRIADDRAFT_21698 [Trichoplax adhaerens] gi|190588130|gb|EDV28172.1| hypothetical protein TRIADDRAFT_21698 [Trichoplax adhaerens] Length = 306 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 119/352 (33%), Gaps = 55/352 (15%) Query: 48 LPGVDLVFPD----ITFIMKER-KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 + G ++ PD I + + + F++H H DH L+ WS + +Y S Sbjct: 1 MIGNGVLIPDTPIAIDYWRERQCNQSKLFFLSHYHADHMEGLNSSWS---LKIYCSEITA 57 Query: 103 GLLEAKRVYER---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 LL + VS + D++ S+ + NH P + + G Sbjct: 58 SLLIHEMSIRSDLVVSLQTGQPHVIPVDEMGCETMSVTLLDANH-CPGAVMFLFEGYFGC 116 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 I++TGD++ DD L ++ + L D+T + + + I + Sbjct: 117 ILYTGDFRYDDQLHLQPGF-------PQSKQVDQLFLDNTYCNPKAQFPTRHDAFQIILN 169 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 I++ ++ + + + + + +A ++ IV+ ++R + ++ + Sbjct: 170 IIQQNPTSNVIIGL-THLGKEKLLEQLAVKLQTMIVVDSKRMQR-------LNLLGCLNV 221 Query: 280 FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE 339 F G + +++ + T+ A+ Sbjct: 222 FTDQMDMGRIIVKYK---------------NEITDSTIERWNQQSGPTIAIIPTAL---- 262 Query: 340 VAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + Q I + VH S H N+L++ ++P + I Sbjct: 263 ---------YIYQDRPPILDKRIYVVHYSDHSNYNELRQFVSVVKPCRITPI 305 >gi|182413381|ref|YP_001818447.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177840595|gb|ACB74847.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 267 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N AL + +++D G S + + + + Sbjct: 3 MRFSILG-SGSSG-NAALL----VTEGARVLVDAGFSARRLGTL--------LAAVGESL 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+F+TH H DH G + L F H+ ++A+ ++A +S + F+ Sbjct: 49 DRIDAVFLTHEHGDHSGGIEGLKKFPHIQIFANAGTARAVQA-----GLSYRPTWHLFET 103 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 G + + + V H E + S + + Sbjct: 104 GARFLFRDLEVTTFSVPHDAQEPVGFRFTSGHDGDLFS 141 >gi|116332713|ref|YP_794240.1| beta-lactamase superfamily hydrolase [Lactobacillus brevis ATCC 367] gi|116098060|gb|ABJ63209.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus brevis ATCC 367] Length = 275 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 22/179 (12%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 ++L L G G + + S + IMID G+ ++ + DI Sbjct: 11 DDLRISVLSSGSTGNV---CYV-----ESPNERIMIDAGL-----SGKKIEKLMGDID-- 55 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ ++ A+ +TH H DH A+ L + VYA+ + +K +++K Sbjct: 56 -RKMADVNALLVTHEHSDHRQAVGILARRYEQLNVYANEGTWDAMSSKIGKVDLAQK--- 111 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 F G +ES V+H E I V D + + G ++D Sbjct: 112 HLFAPDTVQTFGDIDVESFSVSHDAAEPQFYAIHYHGKTFVILTDTGYVSEHVEGIISD 170 >gi|291525271|emb|CBK90858.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale DSM 17629] Length = 535 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 141/474 (29%), Gaps = 109/474 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 +G E+ + +G I+IDCG+ D V+ P + Sbjct: 6 IGADREVTGSCHYLTFGDTH----ILIDCGMEQGAD--LYVNQEIP------VNPSLIDY 53 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YERVSK--- 116 +F+THAH DH G L +++ ++A+ L + K Sbjct: 54 VFVTHAHIDHSGLLPLIYNHGFRGTIFATKATTDLCNIMLKDSAHIQEFEAEWKNRKARR 113 Query: 117 -------KIPCISFQAGDKVDVGAF------------SIESVRVNHSIPETMALVIRSPV 157 + + + V H + + ++ + Sbjct: 114 AGRPEVTPMYNVEDAQNVMQHFTPCDYNSVYEICPGLKVRFVDAGH-LLGSSSIEMWVTE 172 Query: 158 GN----IVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 N IV +GD + + D ++ +ST R + Sbjct: 173 ENVTKKIVFSGDIGNHNRPLIKDPQYVDSA----------DYVVMESTYGNRLHDTPPDY 222 Query: 212 GIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKRVVSVAI 269 ++ + + G +++ FS V R + ++ +I ++ + + + + Sbjct: 223 AVELSKVINATFTRGGNLVIPAFS--VGRTQEMLYFIRRIKTENLLPEHPNFEVYIDSPL 280 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEKDTV 328 V +SD + E + +I+ G L +S E + + +K V Sbjct: 281 AVEATNVFHENVSDC----FDEEAMELISAGINPIKFPGLRVAVSSDESKMINFDKKPKV 336 Query: 329 IFSSR----------------------------AIPGNEVAIGHIKN-----RLVEQGVR 355 I S+ +PG + N +L + + Sbjct: 337 IISASGMCEAGRIRHHLKHNLWRSDSTVLFVGYQVPG--TLGYALLNGAKKVKLFGEEIE 394 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQ 407 V A P +SGH N L I +P+ + +HGE + + Sbjct: 395 VRASIVNLP-GISGHADKNQLTEWLGAIKNKPEHVFIVHGEESTAESFANHVHE 447 >gi|229826222|ref|ZP_04452291.1| hypothetical protein GCWU000182_01594 [Abiotrophia defectiva ATCC 49176] gi|229789092|gb|EEP25206.1| hypothetical protein GCWU000182_01594 [Abiotrophia defectiva ATCC 49176] Length = 215 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 32/210 (15%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G + N+ L Y +++D P D+ + I+ I +++ +AI I Sbjct: 10 LGAVSTNVYLVFYNGNC----LIVD-----PSDEAERI------ISHINEKQVKPLAILI 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH A L + +YA LLE ++ + +A + + G Sbjct: 55 THGHFDHIMAAPVLAEKYGIKIYAGEADRQLLEDSKLNLGQRFLGEDFTMEADEYLKDGD 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 +E E L + G+ V + + DD D ++ + G Sbjct: 115 -ELEF--------EGFRLKVLYTPGHTVGSISFYSDDLE------DNEAFKKVIFSGDSL 159 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 +E ++K + ++ K Sbjct: 160 FAGSIGRVDLP--TGNEATMRKTLEEVFKK 187 >gi|32475492|ref|NP_868486.1| cleavage and polyadenylation specifity factor-related protein [Rhodopirellula baltica SH 1] gi|32446034|emb|CAD75863.1| cleavage and polyadenylation specifity factor-related protein [Rhodopirellula baltica SH 1] Length = 488 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 36/239 (15%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + +++DCG +F +D P+ I + + A+ +TH H DH G + L + Sbjct: 66 DDSQSLLVDCG-TFQGEDARK----KPNPE-IEFSLRGIQALLLTHVHIDHAGRIPYLLA 119 Query: 90 F-LHVPVYASPFAIGLL-------------EAKRVYERVSKKIPC--ISFQAGDKVDV-G 132 P+ S LL +KR+ ++ +I + D G Sbjct: 120 AGFDHPILCSAPTAKLLPLVMEDALKIGFTRSKRLIKKFLGQIRKLLVPLPYHQWHDCPG 179 Query: 133 AFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + + H + + I V +GD + +L + Sbjct: 180 GVKVRLLPAGH-VLGSTMFEIELKDGRRAVFSGDVGAGTNPLLNPPVSPER--------A 230 Query: 192 LALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L+ +ST R +++ + + + + G +V FS + R ++++ Sbjct: 231 DLLVLESTYGDRLHPPKADRQAELEAVIRRTLDDSGVTIVPAFS--LGRTQALLYELNA 287 >gi|254513832|ref|ZP_05125893.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] gi|219676075|gb|EED32440.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] Length = 263 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 30/187 (16%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDITFIMKERKNL 68 G G G N L + + +M+DCG + + VDL +L Sbjct: 5 GSGSRG-NATLI----QTQQSCVMVDCGFTLKEIQRRAAQRQVDL------------GSL 47 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 AI +TH H DH + L H+PVY + R+ + F + Sbjct: 48 DAILVTHEHSDHSSGVAALARCYHIPVYLTHGT-------FASGRIGRCPQIQVFNGDTQ 100 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW--KLDDDAILGDVTDKDSLCAI 186 + +GAF++ +V V H E + S D D D L Sbjct: 101 LHIGAFTVRAVTVPHDAREPVQYCFESAGHRAGVLTDLGSVTSHVRDAFDHCDLLLLEFN 160 Query: 187 GNEGILA 193 + +LA Sbjct: 161 HDRQLLA 167 >gi|332297139|ref|YP_004439061.1| RNA-metabolising metallo-beta-lactamase [Treponema brennaborense DSM 12168] gi|332180242|gb|AEE15930.1| RNA-metabolising metallo-beta-lactamase [Treponema brennaborense DSM 12168] Length = 513 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 18/105 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP----KDDLPGVDLVFPDITFI 61 + LG E+ + ++ + MIDCG +F + D + P Sbjct: 3 ITIYSLGAAEEVTGSKHIFEI----DGRAFMIDCG-AFQGRRNEADRKNRNFEVP----- 52 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 + ++ +THAH DH G L + + +YA+P L Sbjct: 53 ---VDKIESVILTHAHYDHCGLLPLVGKNGYNGNIYATPATRDLA 94 >gi|297571905|ref|YP_003697679.1| beta-lactamase [Arcanobacterium haemolyticum DSM 20595] gi|296932252|gb|ADH93060.1| beta-lactamase domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 209 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 24/151 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L S + ++ID G PG L+ P I+K N+ AI TH H D Sbjct: 15 NCYLL----TSQDETLVIDPG------AQPG--LLLP----ILKN-HNVKAIVATHGHSD 57 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA----KRVYERVSKKIPCISF-QAGDKVDVGAF 134 H GA++++ S PV+ + E S ++ F G + VG Sbjct: 58 HIGAINEIRSEYLCPVFIGKDDAEMARNPIYSGFADEGSSYRVTDCEFVTEGSLITVGEE 117 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + P + L + + ++ TGD Sbjct: 118 VLSVIETPGHTPGS--LCLFNQKNALLFTGD 146 >gi|195451117|ref|XP_002072775.1| GK13503 [Drosophila willistoni] gi|194168860|gb|EDW83761.1| GK13503 [Drosophila willistoni] Length = 652 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 103/327 (31%), Gaps = 51/327 (15%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F++H H DH G L +P+Y SP L+ I + Sbjct: 250 FLSHYHADHYIG----LTRKFSLPIYMSPTTARLVRTFIK----LDDIYINEIDVDQTII 301 Query: 131 VGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + I ++ NH P + + S I+HTGD++ + + + N Sbjct: 302 IDNIEITAIDANH-CPGALMFFFKLSSGQTILHTGDFRANFEMESLPIF-------WNNP 353 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSSVSRIRSII 244 + L D+T + + ++ K+ +L + + + + + Sbjct: 354 QLDVLYLDTTYLNKNYDFSHQSESIDRAVSLVKEFHNKHKDKRILHVCGAYVIGKEKIWL 413 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 +A++ K+ AID + + +L D + + G Sbjct: 414 TVAKEFKLKVWTEPHR-----RAAIDCLHLPDAETYLYD------DPNEANLHVIGLGQI 462 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +L Q L + + + G E + + Sbjct: 463 SYPSLVQYFD-------LYQDKYDMILALRPSGWEKN----------RKPSYGKRISVIG 505 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +L+R ++++P+ +++ Sbjct: 506 IEYSEHSSYKELERFVRFLKPRKVIST 532 >gi|323490434|ref|ZP_08095644.1| hypothetical protein GPDM_13791 [Planococcus donghaensis MPA1U2] gi|323395898|gb|EGA88734.1| hypothetical protein GPDM_13791 [Planococcus donghaensis MPA1U2] Length = 214 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G I N + + ++ D P ++ ++ V K+ +AI + Sbjct: 9 LGPIQTNCYIIS---DDQKNCLIFD-----PGEESTKIEAVV------KKKNLKPLAILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIG-LLEAKRVYERVSKKIPCISFQAGD----- 127 THAH DH GA+ D+ VPVY L +P + D Sbjct: 55 THAHFDHIGAVDDIRERYSVPVYLHHLEKDWLSRPNLNGSGKYPSLPDYRMKDADVLLTD 114 Query: 128 --KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 +++G+F ++ P +++ IV Sbjct: 115 EKTLEIGSFKMDIFHTPGHSPGSVSFSFGKEGFAIV 150 >gi|317055184|ref|YP_004103651.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] gi|315447453|gb|ADU21017.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] Length = 526 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 61/485 (12%), Positives = 145/485 (29%), Gaps = 114/485 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + G K ++D G+ D + + Sbjct: 1 MKITFIGANHEVTGSCTYVEVG----DKRFLVDFGMEQGTD--------------LYENA 42 Query: 66 K------NLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVY------- 111 K + + +THAH DH G L L++ ++A+ L Sbjct: 43 KIPCSPSAIDFVLLTHAHIDHSGLLPLLYAGGFSGNIHATKATCNLCSIMLRDSAHIQEF 102 Query: 112 --------------------------ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 E K+ + ++ G + H + Sbjct: 103 ESEWRSRKGRRKGQEDVEPLYTLADAEGAISKLTPHPYGEMIELCEG-VKVRFTDAGH-L 160 Query: 146 PETMALVIRSPV----GNIVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDST 199 + ++ + IV +GD D + D G + +ST Sbjct: 161 LGSASIELWLTEGSETRKIVFSGDIGNLDQPLIRDPQYID----------GADYAVMEST 210 Query: 200 NAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIA--------E 248 R+ ++ +++ ++++ G V++ +F+ V R + ++ Sbjct: 211 YGNRKHEKVTNYV--EHLAELIQRTFDRGGNVVIPSFA--VGRTQELLYFIRQIKEREMV 266 Query: 249 QIGRKIVLLGSS----------LKR--VVSVAIDVGIIKKDQLFLSDES-FGLYPREQLI 295 + + S ++ A + ++K ++ ++ Sbjct: 267 KNHANFPVYVDSPLAIEATRVFMENKENCFDAEALEYVEKGINPITFPDLHIAVTSDESK 326 Query: 296 VIATGSQGEPRSALAQLSR----GEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN---- 347 +I + + + + L K++++ N + ++ Sbjct: 327 MINFDKTPKIIISASGMCEAGRIKHHLKHNLWHKESLVLFVGYQANNTLGRSLVEGAKTV 386 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELAL 406 +L + + V AE P +SGH + L + + RP+ + HGE + +K Sbjct: 387 KLFGEEISVAAEIRVLP-GISGHADIDGLDKWIDSMERPKTVFINHGEDAVMEEYKRHLE 445 Query: 407 QEGIA 411 ++G Sbjct: 446 EKGYN 450 >gi|75763951|ref|ZP_00743580.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899427|ref|YP_002447838.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228902775|ref|ZP_04066921.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] gi|74488563|gb|EAO52150.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541364|gb|ACK93758.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228856849|gb|EEN01363.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] Length = 209 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + ++PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFYIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|227891718|ref|ZP_04009523.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741] gi|227866521|gb|EEJ73942.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741] gi|300213972|gb|ADJ78388.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus salivarius CECT 5713] Length = 267 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N + + +++D G+S K + + I + Sbjct: 6 MKISVLASGSTG----NATYIE----TPKSKVLVDAGLSGKKIEEL--------MNSIGR 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 K++ ++ +TH H DH + L + +YA+ + AK + +K F Sbjct: 50 TLKDVDSLLVTHEHSDHIKGVGVLARRYGMNIYANQGTWDAMSAKIGKVPLEQK---HIF 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 G + +G IES V+H E + + D D Sbjct: 107 DMGKTLSIGDVDIESFGVSHDAAEPQFYELHHGKSSFAIVTDTGYVPD 154 >gi|145219993|ref|YP_001130702.1| beta-lactamase domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206157|gb|ABP37200.1| beta-lactamase domain protein [Chlorobium phaeovibrioides DSM 265] Length = 464 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 66/486 (13%), Positives = 129/486 (26%), Gaps = 101/486 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + + + +++DCG+ D D F ++ A+ Sbjct: 7 GATERVTGSCHIVHAAGRT----LLLDCGLVQGSD----ADEALNRKPFPFD-ASSIDAV 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------EAKRVYERVSKKI 118 ++HAH DH G + L PVYA L ++ Sbjct: 58 ILSHAHIDHSGRIPLLVRQGFKGPVYAQHATRDLCSVLLLDSAVLSERDALYRQKHPHSA 117 Query: 119 PCISFQA--------------------GDKVDVGAFSIESVRVNHSIPETMALVIR---- 154 + ++ H I + + + Sbjct: 118 SDYHAEPLYSRDDAVLALNLFQGFSYGEQHEIFPGVTVRFQDAGH-ILGSALVELWLQEG 176 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KG 212 +V +GD +L D +++ E ++ +ST R + E Sbjct: 177 EREKKLVFSGDLGQYGSPVLN---DPETI-----ESADVVLIESTYGDRVHRKMEETIAE 228 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRS----IIDIAEQIGRKIVLL----------- 257 I + + + G +++ F+ V R + + E G K + Sbjct: 229 IGE-LISVAGRDGGNIVIPAFA--VGRSQELLYLFAEHYEAWGMKNWQVFLDSPMAIEAS 285 Query: 258 ------------GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 +S+ R V++ + I+IA Sbjct: 286 GIYWNHPELFDAEASVYRNNPVSLPPLHNLHFTPRVEQSQAINSIHSGAIIIAGSGMCNG 345 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L L R + ++F+ G + + E + E V Sbjct: 346 GRILHHLKHTIHR-----PECHILFTGYQADG--TLGRTLVDGAREVYMHGRKYTVEAHV 398 Query: 366 HV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 H S H +D+ R P+ V +HG+P + +L + G Sbjct: 399 HTIGGLSAHGDRDDMLRWASGFSGSPEFFV-VHGDPPAKTSFCDLLRERLGVRAGIPAPG 457 Query: 420 KMLRLF 425 Sbjct: 458 DSYSFT 463 >gi|94987097|ref|YP_595030.1| Zn-dependent hydrolases, including glyoxylases [Lawsonia intracellularis PHE/MN1-00] gi|94731346|emb|CAJ54709.1| Zn-dependent hydrolases, including glyoxylases [Lawsonia intracellularis PHE/MN1-00] Length = 208 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 25/170 (14%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + G + ++ID G + P+D + TFI + + ++ Sbjct: 6 IPLGMLE---TNCYIIQKG----KNALVIDPGGTSPEDLS-----II--TTFITQNKLSI 51 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCI 121 AI TH H DH + L +VPV+AS LL+ K ++ +I Sbjct: 52 QAILCTHLHYDHIFSTAMLHKQTNVPVFASTKDDFLLKTQAKGGIGKLACPKI--EIFQH 109 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 FS E + P + L N + TGD Sbjct: 110 EDLTEGLHTFNTFSCEVINTPGHTPGGVCLYF--KEMNTLFTGDTLFYHT 157 >gi|327312492|ref|YP_004327929.1| metallo-beta-lactamase domain-containing protein [Prevotella denticola F0289] gi|326944901|gb|AEA20786.1| metallo-beta-lactamase domain protein [Prevotella denticola F0289] Length = 251 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 43/221 (19%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 +++ ++IDCG PD + + + + + ITH H DH G + D Sbjct: 39 ETAQTRVIIDCG---------------PDFRQQMLPQPFRKIDGLLITHIHYDHVGGIDD 83 Query: 87 LWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIE 137 + + + VYA+ G L K+ + + +G + Sbjct: 84 VRPYCRLGDIDVYANADTCGGLRHNFPYCFAEHLYPGVPKLNLHALPPHSHIRIGDIEVV 143 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V V H + G + + D D L + EG+ L+ + Sbjct: 144 PVNVMH----GRLPIFGYRFGKLAYITD---------MKTMDDAELPYL--EGVETLVVN 188 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + R S + I + + + +T + V Sbjct: 189 ALRWERPHH--SHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 >gi|228954545|ref|ZP_04116570.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805202|gb|EEM51796.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 252 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 49 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 91 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 92 LAVLLTHAHFDHIGAVDAVRDTFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 151 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 152 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 197 >gi|113867226|ref|YP_725715.1| beta-lactamase superfamily hydrolase [Ralstonia eutropha H16] gi|113526002|emb|CAJ92347.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia eutropha H16] Length = 262 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 64/199 (32%), Gaps = 33/199 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD----DLPGVDLVFPDITFI 61 + F LG E N L ++ +++DCG + + GV PD Sbjct: 2 MRFAFLGSGSE--GNSLLIESREDTTTTRVLLDCGFGIRETARRLERLGV---APD---- 52 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH G+ + + + VY S L + R + Sbjct: 53 -----QLDAVLVTHEHGDHVGSAYAFAARHRLAVYTSHGTW-LATSHL---RGADAADVR 103 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A +G + V H E + V+ + D VT Sbjct: 104 VCGADHAFAIGGLQVLPYTVPHDAREPLQFVLSDGQARLG----VLTDAGMETPYVT--A 157 Query: 182 SLCAIGNEGILALMCDSTN 200 L G+ AL+ + + Sbjct: 158 RLA-----GVDALVLECNH 171 >gi|152984190|ref|YP_001349737.1| hypothetical protein PSPA7_4385 [Pseudomonas aeruginosa PA7] gi|150959348|gb|ABR81373.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 236 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 16/140 (11%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 SS I+IDCG FP + + + + L AI +TH H DH + L Sbjct: 2 SSSDTRILIDCG--FPLRE------IIKRLARLGLSPAQLDAILVTHEHADHIHGVELLA 53 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 +PVY S + + +P +AG ++ + ++ V V+H E Sbjct: 54 RHYQIPVYLSAGTLRGMRR--------PVLPAELLRAGQRLAIRGLEVQVVGVSHDAREP 105 Query: 149 MALVIRSPVGNIVHTGDWKL 168 V+ D + Sbjct: 106 TQFVLTDGQRRFGMLTDLGM 125 >gi|283850621|ref|ZP_06367908.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] gi|283573864|gb|EFC21837.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] Length = 535 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 70/515 (13%), Positives = 142/515 (27%), Gaps = 71/515 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LG G + + + + IDCG+ + + +L D + Sbjct: 1 MKVKF--LGAAGTVTGSCHVIE----TDSARFAIDCGMHQGSEPIERRNL---DTAVYVP 51 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + ITHAH DH G L + +Y +P LL +++ Sbjct: 52 RE--MDFFLITHAHIDHSGLLPRMVKTGFSGKIYCTPPTRDLLGIMLEDSAHIQEMEA-E 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSI-----------------PETMALVIRSPVGNIVHTG- 164 + + G +E++ P + G+I+ + Sbjct: 109 WASRKSRRHGGRMVEALYTRADAAATVDRLVAIPYGQAFSPAPGVTAVYHNAGHILGSAF 168 Query: 165 -DWKLDDDAILGDV---TDKDS----LCAIGNEGILA--LMCDSTNAMREGTCISE--KG 212 + L+ D + D L ++ + A L + T R+ S+ + Sbjct: 169 IELTLEKDGARTRMLFSGDLGRPDQLLVNNPDKPVDADYLFLEGTYGDRDHKDESQSRRE 228 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV----- 267 + + I + ++ I + + + G+ L + ++ Sbjct: 229 LAEAIAYSYERGGKVIIPAFAVERTQEILFCLHLLSKEGKIPADLPVFVDSPLATKATEI 288 Query: 268 -AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQLSRGEM 317 + + + L D L T Q + L + + Sbjct: 289 FKRNPDYLDDETRVLFDRGEDPLSLPNLRFTQTTDQSREINTLKGPAIVISASGMCNAGR 348 Query: 318 RNVKLAEKDTVIFSSRAIPG---NEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGH 370 L +S G I + + + S H Sbjct: 349 VKHHLRHNLWRQDASIVFVGFQAMGTPGRKIVDGAKTIRILGEEVAVNAKIFTIGGFSSH 408 Query: 371 PYPNDLKRMYQWIR---PQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPD 427 + + + PQV + +HGE L L + V + + L P Sbjct: 409 AGQSQILTWLSHFKVNHPQVFL-VHGEQKALTTLAGLVRERFGLTVRIPQYLEEYTLTPG 467 Query: 428 --PIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQ 460 P+ IDE + L+ + R + Sbjct: 468 AEPLVSIDEAKARPRIDWEVLLAEMEGRLARMRER 502 >gi|309390252|gb|ADO78132.1| beta-lactamase domain protein [Halanaerobium praevalens DSM 2228] Length = 272 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 13/131 (9%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 +++D G+S + + + + +L A+ +TH H+DH ++ L +P Sbjct: 26 VLVDAGLS--------GKAIEARMNCLGLDPADLDALLVTHEHKDHIKSIGVLSRRYKIP 77 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 +YA+ G EA + K VG ++H + + + Sbjct: 78 IYANDGTWGAAEADLGKIKAENKRVFT-----GDFLVGNLKFSPYSLSHDAAQPVGYTCQ 132 Query: 155 SPVGNIVHTGD 165 IV D Sbjct: 133 VEDKKIVVATD 143 >gi|313892871|ref|ZP_07826448.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442224|gb|EFR60639.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 268 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITF 60 E+ + G G N + I+ D G+S +D+ Sbjct: 8 EVHVIASGSKG----NCTVI----KKGNSVILHDVGISCRRIVNGLKELHIDM------- 52 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + IFI+H H DH L L +PVY ++ K + K Sbjct: 53 -----AQVEGIFISHEHSDHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKNQL 103 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 I + +G +E V+H + + + + + D + D+IL + D Sbjct: 104 IELT-KGSLTLGNLIVEPFAVSHDAADPIGINVFAGKDKATVVTDTGVISDSILHRMDDT 162 Query: 181 DSL 183 L Sbjct: 163 TLL 165 >gi|301299918|ref|ZP_07206149.1| metallo-beta-lactamase domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852463|gb|EFK80116.1| metallo-beta-lactamase domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 267 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N + + +++D G+S K + + I + Sbjct: 6 MKISVLASGSTG----NATYIE----TPKSKVLVDAGLSGKKIEEL--------MNSIGR 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 K++ ++ +TH H DH + L + +YA+ + AK + +K F Sbjct: 50 TLKDVDSLLVTHEHSDHIKGVGVLARRYGMNIYANQGTWDAMSAKIGKVPLEQK---HIF 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 G + +G IES V+H E + + D D Sbjct: 107 DMGKTLSIGDVDIESFGVSHDAAEPQFYELHHGKSSFAIVTDTGYVPD 154 >gi|289578228|ref|YP_003476855.1| beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289527941|gb|ADD02293.1| beta-lactamase domain protein [Thermoanaerobacter italicus Ab9] Length = 207 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 25/183 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +R+ I+ID P + + +I + + I +TH H D Sbjct: 14 NCYIVS--DEETRETIVID-----PGEYSSEIQ------DYIGINKLRVKYILLTHGHFD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGA 133 H G + +L V S +L K VY+++ I GD + G Sbjct: 61 HIGGVEELRKVTQAEVAISKEDAPMLLDPSLNLSKMVYKKIQCSAADILLNGGDILYFGK 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGI 191 ++IE + + I + + TGD D D+L + Sbjct: 121 YTIEVLHTPGHTKGGVCFKIDN----VCFTGDTVFKGSIGRYDFPGGDFDTLMDSIKNKL 176 Query: 192 LAL 194 L L Sbjct: 177 LVL 179 >gi|254491233|ref|ZP_05104414.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxidans DMS010] gi|224463746|gb|EEF80014.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxydans DMS010] Length = 256 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 12/78 (15%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 ++ + +S+K +++D G P I I + +AI ITH H DH Sbjct: 14 YIWLIQAKNSQKILIVDPG------------DAIPVIEAINQHNLQPVAILITHHHADHI 61 Query: 82 GALHDLWSFLHVPVYASP 99 G + L +VPVY Sbjct: 62 GGIPALLEQFNVPVYGPA 79 >gi|90961029|ref|YP_534945.1| zinc-dependent hydrolase [Lactobacillus salivarius UCC118] gi|90820223|gb|ABD98862.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus salivarius UCC118] Length = 267 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N + + +++D G+S K + + I + Sbjct: 6 MKISVLASGSTG----NATYIE----TPKSKVLVDAGLSGKKIEEL--------MNSIGR 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 K++ ++ +TH H DH + L + +YA+ + AK + +K F Sbjct: 50 TLKDVDSLLVTHEHSDHIKGVGVLARRYGMNIYANQGTWDAMSAKIGKVPLEQK---HIF 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 G + +G IES V+H E + + D D Sbjct: 107 DMGKALSIGDVDIESFGVSHDAAEPQFYELHHGKSSFAIVTDTGYVPD 154 >gi|299534891|ref|ZP_07048220.1| hypothetical protein BFZC1_02637 [Lysinibacillus fusiformis ZC1] gi|298729736|gb|EFI70282.1| hypothetical protein BFZC1_02637 [Lysinibacillus fusiformis ZC1] Length = 281 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 20/156 (12%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHE 78 + YG P + +++ID G+ D++ I+ + + + AI +TH H Sbjct: 40 NIVLYGEPQMKDFVLIDAGMPKSADEI---------ISVVEERYGSKSRPKAIILTHGHF 90 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVG 132 DH G + +L VPVYA I L + Y + + +++G Sbjct: 91 DHVGGIIELIEMWDVPVYAHRLEIPFLSGTQNYPEPDPTVNNGLVAKMSPIFPNEAINLG 150 Query: 133 AFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 +++ + + S+P I +P + H ++ Sbjct: 151 G-NLKVLPSDGSVPFMAGFQWIHTPGHSPGHISLFR 185 >gi|119715244|ref|YP_922209.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614] gi|119535905|gb|ABL80522.1| beta-lactamase domain protein [Nocardioides sp. JS614] Length = 460 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 66/457 (14%), Positives = 127/457 (27%), Gaps = 89/457 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L F LG + + L + ++D G+ DL + T Sbjct: 1 MSSPVLTF--LGAAESVTGSKFLV----DTHSSRTLVDAGL-----YQGLADLRRRNWTP 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYER 113 L ++ +THAH DH G L L P+ SP L+E A E Sbjct: 50 FPVPASGLGSVVVTHAHLDHCGFLPRLVKEGFDGPILCSPDTAELVEIVLRDSAHLQEED 109 Query: 114 VSK------------------KIPCISFQAGDKVDVG-------AFSIESVRVNHSIPET 148 + + + D G E H I + Sbjct: 110 ARQANAGGYSKHRPALPLYDLEDVERTLPLLTPTDFGTAVDLAPDVRAELRPAGH-ILGS 168 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 +++ + + +GD D IL D + ++ +ST R Sbjct: 169 STVLLDAAGRRTLFSGDLGRDHHPILRAPADPPA--------AHVVVVESTYGDRRHPAT 220 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSS-----VSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + + + + G VLV F+ + + +++ E + L R Sbjct: 221 DAEVLASAVRRTIGRG-GTVLVPAFAVDRTELVLLELHRLMEAGEVPRVPVHLDSPMALR 279 Query: 264 VVSVAID-------------------VGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 ++V + +G + D + S L + ++ + Sbjct: 280 ALTVYREALDTGSVQLRPDLDQVRAALGAMHVDAVPDVAGSMRLNRPGKPCIVVSA---- 335 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 S +A R + + + + Sbjct: 336 --SGMATGGRVVHHLAHQLPDPRNTVVLTGYQAVGTRGRQLLDGARQVKMHGRYVPVRAE 393 Query: 365 V----HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 + + S H +D+ P+++ +HGEP Sbjct: 394 IVDVPYFSVHADADDIVGWLGRAPEPPEIVYVVHGEP 430 >gi|15607080|ref|NP_214462.1| hypothetical protein aq_2135 [Aquifex aeolicus VF5] gi|6648043|sp|O67893|Y2135_AQUAE RecName: Full=Uncharacterized protein aq_2135 gi|2984341|gb|AAC07862.1| hypothetical protein aq_2135 [Aquifex aeolicus VF5] Length = 211 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 24/153 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +P VG I +N ++ S + I+ID P + + D Sbjct: 3 IKVIP---VGPIAVNCSVV--ADEKSGEAIIID-----PGAEAEKILEAVKDF------- 45 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER------VSKKIP 119 ++ I TH H DH G + L VP Y +P L+ + V P Sbjct: 46 -KVVGIVATHGHIDHVGQVGKLKELFDVPFYMNPLDKFLINDEIWSGFASYIGAVPCPEP 104 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + GD + VG + + P L Sbjct: 105 DVEISEGDVIRVGDVEFKVLHTPGHTPGLCCLY 137 >gi|296504758|ref|YP_003666458.1| hydroxyacylglutathione hydrolase [Bacillus thuringiensis BMB171] gi|296325810|gb|ADH08738.1| hydroxyacylglutathione hydrolase [Bacillus thuringiensis BMB171] Length = 209 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGLFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|294501964|ref|YP_003565664.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|295707315|ref|YP_003600390.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] gi|294351901|gb|ADE72230.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294804974|gb|ADF42040.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] Length = 264 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 67/217 (30%), Gaps = 17/217 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 +++D G+S + + + + +L I +TH H DH L Sbjct: 17 ILVSDGEHSLLVDAGLSGKQMEAL--------FQQVNRNIPDLSGILVTHEHSDHIKGLG 68 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P++A+ ++ F+ G G +ES V+H Sbjct: 69 VLARKYKLPIFANEKTWNAMDGLI---GNINTEQKFHFEIGQTKSFGQLEVESFGVSHDA 125 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILAL----MCDST 199 E M V + D + D +D + + +L + Sbjct: 126 AEPMFYVFHQGSKKLTLITDTGYVSDRMKGTIKNSDMYVFESNHDVEMLRMGRYPWSIKR 185 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + +S + + D++ + + + S Sbjct: 186 RILSDVGHVSNEDAALAMADVIGDQTKRIYLAHLSQD 222 >gi|150008332|ref|YP_001303075.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides distasonis ATCC 8503] gi|255015488|ref|ZP_05287614.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_7] gi|256839380|ref|ZP_05544889.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides sp. D13] gi|262384549|ref|ZP_06077683.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_33B] gi|298375089|ref|ZP_06985046.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_19] gi|301309158|ref|ZP_07215102.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 20_3] gi|149936756|gb|ABR43453.1| putative metallo-beta-lactamase superfamily hydrolase [Parabacteroides distasonis ATCC 8503] gi|256738310|gb|EEU51635.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides sp. D13] gi|262293842|gb|EEY81776.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_33B] gi|298267589|gb|EFI09245.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_19] gi|300832840|gb|EFK63466.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 20_3] Length = 267 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 55/168 (32%), Gaps = 23/168 (13%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD--IT 59 +L FL L G G N G ++ID G+ + V D I Sbjct: 1 MKLSFLSLASGSSG----NCYYLGTSEFG----MLIDAGIGIRT-----IKKVLKDRSID 47 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 F ++A+ ITH H DH + L L +PVYA+ + K Y + + Sbjct: 48 F-----TKIVAVLITHDHADHIKTVGYLGEKLCIPVYATADVHRGI-DKSRYVEETLCVS 101 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + F I + V H + + I D Sbjct: 102 RKVIEKEVPFLIRDFRITAFEVPHDSTDNVGYHIEYGNHKFTFATDVG 149 >gi|42523665|ref|NP_969045.1| hydroxyacylglutathione hydrolase GloB [Bdellovibrio bacteriovorus HD100] gi|81617111|sp|Q6ML19|GLO2_BDEBA RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|39575872|emb|CAE80038.1| hydroxyacylglutathione hydrolase GloB [Bdellovibrio bacteriovorus HD100] Length = 251 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 25/147 (17%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 ++ +++K + +D P D P +D F+ + +L AI +TH H DH Sbjct: 17 YVFILTDDATQKAVAVD-----PGDAGPVID-------FLRANKLDLAAILLTHHHSDHI 64 Query: 82 GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 G + +L + PVYA + + + GD V G + + + Sbjct: 65 GGVGELKAAFDCPVYAP-----------QKNQKQIPVADQWLKEGDSVTCGPWDFTVMEL 113 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKL 168 +A + + +GD Sbjct: 114 PGHTLGHIAY--WNQKHKWLFSGDVIF 138 >gi|326799928|ref|YP_004317747.1| beta-lactamase [Sphingobacterium sp. 21] gi|326550692|gb|ADZ79077.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 462 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 43/268 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G ++ +M L I+IDCG+++ P V L D + + Sbjct: 7 GAAQQVTGSMHLLEIEGYK----ILIDCGLNY----EPSVSLE--DNEHFPFHPSEIDVL 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------------AKRVYERVSK- 116 +THAH DH G + L + ++ L E KR +R K Sbjct: 57 ILTHAHIDHSGNIPTLIRSGFQGQILSTSPTAALSELLMLDSVNIFLKQEKRKVKRGKKT 116 Query: 117 --------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + A ++ F R+ +I T+ V + Sbjct: 117 FTRYNKPLYLQKHVMDAVERFVTIPFHKPF-RITGNITLTLIPVGHLLGAAAAILEIEEN 175 Query: 169 DDDAILGDVTDKDSLCA------IGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIM 221 + D + L+C+ST R T + I + Sbjct: 176 GQTKKIAFSGDLGRKNYPILPDPQPLPPVDYLVCESTYGGRHHTDQDFTEVLINTIKETC 235 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G +++ FS V R ++++ + Sbjct: 236 IKTPGKLIIPAFS--VGRTQALVYSLNR 261 >gi|312622486|ref|YP_004024099.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] gi|312202953|gb|ADQ46280.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] Length = 540 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 52/511 (10%), Positives = 135/511 (26%), Gaps = 76/511 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +GG + + L+ K ++DCG F G+ + Sbjct: 1 MKITFIGGAQSVTGSCYLF----DLEGKKFLVDCG-MFQG----GLTEELLNYESFPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 + + ++HAH DH G + L+ + + + L Sbjct: 52 SEIEFVILSHAHIDHSGRIPKLYKDGFRGIICTTDATMDLCSIMLPDSAHIQESEIEWKN 111 Query: 106 -EAKRVYERVSKKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETMALV 152 + KR +++ + + S H + + + Sbjct: 112 RKRKREGKKLLLPLYTLEDAENVLKHFRGVKYGQRIQIDKNLSFVFKDAGH-MLGSAIVE 170 Query: 153 IRS----PVGNIVHTGD-------------WKLDDDAILGDVTDKDSL-CAIGNEGILAL 194 + +V +GD D D + + T + L + N+ + Sbjct: 171 LYVKENGKEYKLVFSGDLGNRNVPILKDPTIIDDCDYLFIESTYGNRLHVDVENKSKKLI 230 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR---------IRSIID 245 ST G I +I+ + + + + R + + Sbjct: 231 NIISTTISNGGKVIIPSFAVGRTQEILYEIAKEISTDSEEAKIIRNVEIFVDSPLATSAT 290 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 + +++ + + + + + + I+I++ E Sbjct: 291 AIYKKHIDYFDTEAAMFIKNGIYPLEPPNLRFIKSVDESKWLNEYDKSCIIISSSGMCEA 350 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + + + K + + E Sbjct: 351 GRIKHHL---KHNLWNEKNTVLFVGYQAPNTLGRKLLDGQKKVKIFGEEVEVRAKIEYIE 407 Query: 366 HVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 SGH + L + + +P+ + +HGE + V G++ Sbjct: 408 AYSGHADKSGLFSWIEQMNQKPKKIFVVHGEKEVQFEFAKELQNRFKTDVIVPMRGEVYE 467 Query: 424 LFPDPIEIIDEVVHG-LFLKDGFLIGKFADL 453 + P+ + + + + ++ + ++ Sbjct: 468 IAPEYVTQSERLFSELPSFVNLSVLAQIEEI 498 >gi|197122470|ref|YP_002134421.1| beta-lactamase [Anaeromyxobacter sp. K] gi|196172319|gb|ACG73292.1| beta-lactamase domain protein [Anaeromyxobacter sp. K] Length = 460 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 73/458 (15%), Positives = 131/458 (28%), Gaps = 83/458 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G + + L GS +++D G+ F + P + + R Sbjct: 4 IRF--LGAAGTVTGSRFLVETGSVR----VLVDAGL-FQGHKELRLRNRAP---WPVSPR 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------EAKRVYERVSK 116 L A+ +THAH DH GAL L PV+ +P L + R + Sbjct: 54 D-LAAVVLTHAHVDHSGALPLLARQGFRGPVHCTPATGDLAGLLLPDSGRLQEEEARYAN 112 Query: 117 KIPCISFQAGDKVDVG-----------------------AFSIESVRVNHSIPETMALVI 153 + + +I R H I + + + Sbjct: 113 RKGYSKHAPALPLYTEQDALAVLPRLAPLRYAEPRQIAPGVTIRFHRAGH-ILGSALVEL 171 Query: 154 RS---PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 I+ +GD IL D + AL+ +ST A R S Sbjct: 172 SVGGARGARILFSGDLGRYGAPIL---PDPE-----PGPAADALVLESTYAGRRHEAASP 223 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLGSSL--- 261 + + G ++V F+ V R + I+ ++ V + S + Sbjct: 224 AAALAAEVHAVVRSGGALVVPAFA--VGRTQEILFTLRELEDRGEIPAIPVFVDSPMAVD 281 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR-----------SALA 310 + +A + ++ L P + + S +A Sbjct: 282 ATPIYLAHREDHDDETLRRIAAGEEPLRPAKLTFCRSPDQSKAINDVRGPCVILSASGMA 341 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV--- 367 R + ++N + + V Sbjct: 342 TGGRVLHHLARRLPDPRNTVLLVGFQAGGTRGWRLQNGAETLRIHGEDVPVKARVATLGG 401 Query: 368 -SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHK 402 S H +++R + +P+ +HGEP L A K Sbjct: 402 FSAHADEAEIRRWLATLPAQPRRTFLVHGEPTALAAAK 439 >gi|32475654|ref|NP_868648.1| metal-dependent hydrolase [Rhodopirellula baltica SH 1] gi|32446196|emb|CAD76025.1| conserved hypothetical protein-putative metal-dependent hydrolase [Rhodopirellula baltica SH 1] Length = 268 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 72/231 (31%), Gaps = 35/231 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFIT 74 N GS ++ D G+SF K G D + AI I+ Sbjct: 12 GNCVFVDTGSEC----VLFDAGISFRKVQTRLNEAGRD------------ASEIDAIVIS 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH G L L L+VP++ S L + + F G+ +G Sbjct: 56 HDHRDHIGCLGVLNRKLNVPIHISRRT---LRSTERRVPLGPVHDIQHFVPGETFTIGET 112 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDVTDKDSLCAIGNEGIL 192 +IE++ H + A + + D DD + D + + +E Sbjct: 113 AIETMPTPHDGVDGAAFTLDNGCSRFGLWTDLGCVFDDMLASVNTLDALFIESNYDEN-- 170 Query: 193 ALMCDSTNAMR-------EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 ++ S G IS + + I + + L + Sbjct: 171 -MLATSGYPEFLRDRISGSGGHISNREAAEVISHASDHLQWACLAHLSDEN 220 >gi|218885278|ref|YP_002434599.1| beta-lactamase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756232|gb|ACL07131.1| beta-lactamase domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 536 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 65/529 (12%), Positives = 137/529 (25%), Gaps = 96/529 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG + + + ++ IDCG+ + ++ D + Sbjct: 1 MNIQFLGAAQTVTGSCYMLE----ANGTRFAIDCGMHQGNSE---IEKRNVDTD--IYRP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YERV 114 ++ +THAH DH G L + +Y +P L++ Sbjct: 52 GDIAFFLVTHAHIDHTGLLPRMTREGFKGDIYCTPPTRDLMDIMLQDSAHIQEMEAEWET 111 Query: 115 SKKIPCISFQAGDKVDVG----AFSIESVRVNHSIPETMALVIRSPVGNIVHT-----GD 165 K+ + + + V ++ P A IR + H + Sbjct: 112 RKQSRFGRRKPVEPLYTMADAQNAVRRLRPVEYNAPFEPAPGIRVTYKDAGHILGSAFLE 171 Query: 166 WKLDDDAILGD---VTDKDSLCAI------GNEGILALMCDSTNAMREGTCI--SEKGIK 214 ++ ++ D + L +ST R+ S + Sbjct: 172 IEVTENGTPTRLVFSGDLGRPNQLIVNDPDHPARPDYLFMESTYGDRDHKNSENSRAELA 231 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 + I + + ++ ++ + + Q G+ + + + Sbjct: 232 EAIAYSHGHGEKVIIPAFAVERTQQVLYTLHMLWQEGKLPA----DMPVYIDS-----PL 282 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEKDTVIFSSR 333 + + Y + A G L LS E + + + VI S+ Sbjct: 283 AIRATEIFRKHPRFYDDDLKAAYARGEDPLSLPNLRYTLSSQESQALNGMKGSAVIISAS 342 Query: 334 AI--------------------------PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV 367 + G I + + V Sbjct: 343 GMCNAGRIKHHLRHNLWRQGASIVFVGYQGVGTPGRKIVDGAQTLRLFNEDVAVNAKVFT 402 Query: 368 ----SGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVAHKELALQEGIACVPP------ 415 S H + L + + + +HGE V E + V Sbjct: 403 IGGFSAHAGQSHLLDWVGAFQHKDMEVFLVHGEEKAQVTLSEKLHERYGLTVHVPTYMEE 462 Query: 416 --VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKRRQLS 462 ++ G+ + PD V FL+G R++L+ Sbjct: 463 VTLKPGRTMLTAPDESRAHPRVDW------EFLLGDTEAKVAMLRQRLA 505 >gi|256423978|ref|YP_003124631.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256038886|gb|ACU62430.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 273 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 19/147 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G ++ + ++ID G+S + + + + + + AIFI+H H Sbjct: 14 GNCYYIG----NATEAVLIDAGISCRETER--------RMKRLGLKMDIVKAIFISHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY + + F V +G ++ + Sbjct: 62 DHIRGLEVLSKKYSLPVYITEKTM------LHGGLNLHADNVKVFDEATPVIIGTLTVHA 115 Query: 139 VRVNHSIPETMALVIRSPVGNI-VHTG 164 H E + +I + I V T Sbjct: 116 FSKAHDAIEPHSFMITADEICIGVFTD 142 >gi|302346530|ref|YP_003814828.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] gi|302150482|gb|ADK96743.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] Length = 268 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L FL G G G N L + +MIDCGV G+ + + Sbjct: 2 LKFLSFG-SGSSG-NCYLL----YTDTDCLMIDCGV--------GIRSLKKHFHNYGLQL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH H DH ++ + L +PVY + + R + Q Sbjct: 48 NMVHNVLITHDHADHVKSVGSISGDLQLPVYTTKDVHRGISQNWCVRRKVDQQYVKFVQK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G+++ +G F + V H + + + D Sbjct: 108 GEEITIGEFKVTPFGVPHDSTDCVGYSVEYEGIRFTLITDCG 149 >gi|227486135|ref|ZP_03916451.1| possible beta-lactamase [Anaerococcus lactolyticus ATCC 51172] gi|227235899|gb|EEI85914.1| possible beta-lactamase [Anaerococcus lactolyticus ATCC 51172] Length = 263 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 11/149 (7%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 I++D G S + + + + + L IF+TH H DH L Sbjct: 18 IEHDGTKILVDAGFSGRQIERL--------LESVGESATKLDGIFLTHEHADHAKGAAVL 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P++A+ +A + + F++ + ++ + I + H E Sbjct: 70 AKRFKIPLFANRGTW---KAILPTTKNFSEELIGEFKSNEFLNFKSMDIYPISTYHDANE 126 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + V+ I D + DD I Sbjct: 127 PVGFVLYLGNKKITLLTDTGMIDDKIAYQ 155 >gi|322387746|ref|ZP_08061355.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321141613|gb|EFX37109.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 269 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 13/158 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + +S+K I++D G+S L G I ++ ++L AI ITH H DH Sbjct: 19 SFYLETSKKKILVDAGLSGKKITSLLGE---------INRKPEDLDAILITHEHADHIHG 69 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 + L + +YA+ +E Y F+ G G IES V+H Sbjct: 70 VGVLARKYGMDLYANDKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSH 128 Query: 144 SIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 129 DAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|163942020|ref|YP_001646904.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229135085|ref|ZP_04263888.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST196] gi|163864217|gb|ABY45276.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] gi|228648373|gb|EEL04405.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST196] Length = 209 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + + I+ D G G LV T++ + + Sbjct: 6 MPLGPLQ---TNAYIL---TNDQNECIIFDPG-------HEGEKLV----TYLQEAQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEANWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + +FS E P +++ S N V +GD Sbjct: 109 HIIDEEGTLTISSFSFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|89897763|ref|YP_521250.1| hypothetical protein DSY5017 [Desulfitobacterium hafniense Y51] gi|89337211|dbj|BAE86806.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 270 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 27/144 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + G+ ++ ++DCG+S +L DI + IFITH H Sbjct: 12 GNSIVVGH----EKRNFLVDCGISLKATLH---NLAILDIA-----PSEIEGIFITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-----RVSKKIPCISFQAGDKVDVGA 133 DH + + L +P+YAS AK E K + + D Sbjct: 60 DHIKGVGAVARKLKIPIYAS--------AKIWDELNPSIGKLKDEQRVVVK--DAFTCAG 109 Query: 134 FSIESVRVNHSIPETMALVIRSPV 157 + +H E+ + + Sbjct: 110 LRVRVFPTSHDSQESFGVRVEVEQ 133 >gi|121997619|ref|YP_001002406.1| beta-lactamase domain-containing protein [Halorhodospira halophila SL1] gi|121589024|gb|ABM61604.1| beta-lactamase domain protein [Halorhodospira halophila SL1] Length = 476 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 90/280 (32%), Gaps = 64/280 (22%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV-FP-DITFIMKERKNLM 69 G ++ + L G + ++IDCG+ + FP D T + Sbjct: 7 GATRQVTGSCMLLEAG----GRRVLIDCGLIQGGGKQEARNREPFPFDPTTL-------D 55 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL-----------------LEAKRVY 111 A+ +THAH DH G L L P++ L +E K+ Sbjct: 56 AVVLTHAHLDHSGRLPLLVRSGYDGPIHTHTAGAALVDILLRDAAFLAERDAAIENKKRR 115 Query: 112 ERVSKKIPCI---------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 R + + V ++ H I + + + Sbjct: 116 RRHDEPVEPTYTVADAEQTIEALVGHAYDEPWQPVPGVTVRLRDAGH-ILGSAIVEMWIE 174 Query: 157 V----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE-- 210 +V +GD IL + T +G L+ +ST R+ E Sbjct: 175 ADGERRKVVFSGDLGHAGAPILRNPT------EVGE--ADLLVMESTYGDRDHRSWEETW 226 Query: 211 KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + + I + + + G +LV F+ V R + ++ I + Sbjct: 227 EELGEIIRNA-RASHGNILVPAFA--VGRTQELLYILARH 263 >gi|291613004|ref|YP_003523161.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291583116|gb|ADE10774.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 57/179 (31%), Gaps = 37/179 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L LG G IG N S ++ID G L Sbjct: 1 MRLRI--LGCSGGIGGN---LRTTSMLLDHDVLIDAGTGIGDLSL--------------A 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVP------VYASPFAIGLLEAKRVYERVSKK 117 E + +F+TH+H DH L L + ++A+ + +L + Sbjct: 42 EMCVIDHVFVTHSHLDHIACLPLLVDSVGFMRDQPLVIHATDETLDILRQHVFNWEIWPD 101 Query: 118 IPCISFQAG-----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I + VD+G I + NH +P + I S ++V TGD Sbjct: 102 FTEIPSLHQPILRYERIVLGETVDMGGRKITPLPANHVVP-AVGYQIDSGKTSLVFTGD 159 >gi|212640091|ref|YP_002316611.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] gi|212561571|gb|ACJ34626.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 244 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 80/241 (33%), Gaps = 44/241 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + L+ + ++DCG +D+ + + A+ ++H H D Sbjct: 20 SCYLFEHDGFR----FLVDCGSGALAQLQNVIDI------------EQIDAVIVSHYHHD 63 Query: 80 H---YGALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 H G L + L V P+Y A+ ++ V+K +++ + Sbjct: 64 HVADIGPLQYARLIKKNLGVDLPELPIYGHSLDRDGF-ARLAHKGVTK---AVAYDPNET 119 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + +G F+I + H A+ I + +V+T D + Sbjct: 120 LYIGPFAISFMETEHPAI-CYAMRIEAGGKTVVYTADSSYLPQFVPF------------A 166 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + L+C+ + + + I ++A L+ T + ++ A+ Sbjct: 167 KQAHLLICECNFYAGQHAKQAGHMTSEEAATIARDAGVETLLLTHLPHFGNVEQLVVEAK 226 Query: 249 Q 249 + Sbjct: 227 K 227 >gi|46446103|ref|YP_007468.1| hypothetical protein pc0469 [Candidatus Protochlamydia amoebophila UWE25] gi|46399744|emb|CAF23193.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 259 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 19/161 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 F PL G G N G +S+ ++ID G+S + + I + + Sbjct: 6 FCPL-ASGSKG-NCIYLG----TSQTKVLIDAGIS--------AKAIQNRLAEINVDISD 51 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AI ITH H DH L L L +PV A+ K + E F G+ Sbjct: 52 IDAILITHEHSDHIQGLKVLAYKLGIPVLANHETA-----KGIVEAFRNCPKFKIFSTGE 106 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + + H + +A IR + D Sbjct: 107 TFEFKDIEVHPFTIQHDTIDPVAFTIRLNDLKLGFCTDLGF 147 >gi|222628797|gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group] Length = 517 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 42/328 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y + L++ + + Sbjct: 167 AYFLSHFHHDHYGGLTKKW--CHGPIYCTALTARLVKMCLS----VNPEYICPLELDKEY 220 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + S+ + NH P + R +HTGD++ L + + Sbjct: 221 VIEGVSVTLLEANH-CPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPL--------LQR 271 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-----KGCVLVTTFSSSVSRIRSI 243 I L D+T + ++ + K K ++V +S + + Sbjct: 272 GQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYS--IGKENVY 329 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + I++ + I S +R++ G ++ SD L + + Sbjct: 330 LAISKALQVPIYTDA-SRRRILHA---FGWSDLSKMICSDSQSSSLHVLPLSSLRHENLQ 385 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + L Q R + + ++ GN +L + Sbjct: 386 KYLETLKQ------RFLAVLAFRPTGWTFSEETGN---------QLDLIKPSSRGKITIY 430 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++L+ ++RPQ ++ Sbjct: 431 GVPYSEHSSFSELREFVMFLRPQKVIPT 458 >gi|162452603|ref|YP_001614970.1| hypothetical protein sce4327 [Sorangium cellulosum 'So ce 56'] gi|161163185|emb|CAN94490.1| conserved hypothetical secreted protein [Sorangium cellulosum 'So ce 56'] Length = 283 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 35/149 (23%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-------GVDL-VF 55 ++ + G G N L+ S +++D GV + G D + Sbjct: 1 MKITIIASGS----GGNATLF----ASRGTRVLVDAGVGPRVLEQCLSAANAGGADGRLL 52 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS 115 PD AI ITHAH DH G +P+YAS E + Sbjct: 53 PD------------AIVITHAHADHVGVAARYNKKHKIPIYASEATARAAE-------LG 93 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +F + + VGA + + H Sbjct: 94 DRERVRAFSSREPFAVGALTFSPTPLPHD 122 >gi|56798256|dbj|BAD82911.1| Snm1 [Oryza sativa Japonica Group] Length = 485 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 42/328 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y + L++ + + Sbjct: 167 AYFLSHFHHDHYGGLTKKW--CHGPIYCTALTARLVKMCLS----VNPEYICPLELDKEY 220 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + S+ + NH P + R +HTGD++ L + + Sbjct: 221 VIEGVSVTLLEANH-CPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPL--------LQR 271 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-----KGCVLVTTFSSSVSRIRSI 243 I L D+T + ++ + K K ++V +S + + Sbjct: 272 GQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYS--IGKENVY 329 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + I++ + I S +R++ G ++ SD L + + Sbjct: 330 LAISKALQVPIYTDA-SRRRILHA---FGWSDLSKMICSDSQSSSLHVLPLSSLRHENLQ 385 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + L Q R + + ++ GN +L + Sbjct: 386 KYLETLKQ------RFLAVLAFRPTGWTFSEETGN---------QLDLIKPSSRGKITIY 430 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++L+ ++RPQ ++ Sbjct: 431 GVPYSEHSSFSELREFVMFLRPQKVIPT 458 >gi|115458180|ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group] gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza sativa Japonica Group] gi|113564261|dbj|BAF14604.1| Os04g0401800 [Oryza sativa Japonica Group] gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza sativa Indica Group] Length = 481 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 42/328 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y + L++ + + Sbjct: 167 AYFLSHFHHDHYGGLTKKW--CHGPIYCTALTARLVKMCLS----VNPEYICPLELDKEY 220 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + S+ + NH P + R +HTGD++ L + + Sbjct: 221 VIEGVSVTLLEANH-CPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPL--------LQR 271 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-----KGCVLVTTFSSSVSRIRSI 243 I L D+T + ++ + K K ++V +S + + Sbjct: 272 GQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYS--IGKENVY 329 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + I++ + I S +R++ G ++ SD L + + Sbjct: 330 LAISKALQVPIYTDA-SRRRILHA---FGWSDLSKMICSDSQSSSLHVLPLSSLRHENLQ 385 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + L Q R + + ++ GN +L + Sbjct: 386 KYLETLKQ------RFLAVLAFRPTGWTFSEETGN---------QLDLIKPSSRGKITIY 430 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++L+ ++RPQ ++ Sbjct: 431 GVPYSEHSSFSELREFVMFLRPQKVIPT 458 >gi|113477523|ref|YP_723584.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101] gi|110168571|gb|ABG53111.1| beta-lactamase-like [Trichodesmium erythraeum IMS101] Length = 539 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 70/449 (15%), Positives = 151/449 (33%), Gaps = 48/449 (10%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM-KERKNLMA--IFITHAH 77 L G I++DCG++ +I+ + + ++ L A + +HAH Sbjct: 19 CLLVRIGI----HRILLDCGIT--------------NISLLTNETKQQLPADIVLCSHAH 60 Query: 78 EDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDKVDV-GAF 134 DH G L SF +P+YAS LL + + C +++ Sbjct: 61 SDHAQGLLALHRSFPDLPIYASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGL 120 Query: 135 SIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++E H +P A ++ +++TGD+ L ++ + L + Sbjct: 121 TVELFPAGH-LPGATAFLLTYTQGNRTYKLLYTGDFFLSKSRLVEGLP----LAYLRGLK 175 Query: 191 ILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + L+ + + A E + + IY+ + V++ T + + ++ + Sbjct: 176 LDVLIVEGSYGTAHYPHRRQLENNLAERIYEAIAFGT-SVILPTPPLGLGQELLMLLRSH 234 Query: 249 QIGRKIVLLGSSLKRVV--SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 G L V VA + + + L R Sbjct: 235 HY-----FTGRDLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLR 289 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + +L E+ + +A+KDT + + I + ++ + + + + Sbjct: 290 RSPGKLPDKELPYILIADKDTDL--RQYIINQDNSVLILLPEQPGKTSQELDFAYTETYL 347 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 ++ H ++ +RPQ ++ ++G P +L +L E + + + L Sbjct: 348 LTDHCDGLGTTQLIHNLRPQHVIFVNGSPSYL---ADLTNLEELRNRYQLHSPANGTLVD 404 Query: 427 DPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 PI V L + + I Sbjct: 405 LPIGETFIVPTSLETNYEGELNELNTEVI 433 >gi|160893487|ref|ZP_02074272.1| hypothetical protein CLOL250_01038 [Clostridium sp. L2-50] gi|156864882|gb|EDO58313.1| hypothetical protein CLOL250_01038 [Clostridium sp. L2-50] Length = 210 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 80/218 (36%), Gaps = 27/218 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M E+ LG + G N + + +++ I++D P D+ D + Sbjct: 1 MAELEVKLYQLGDL---GTNCYIVS--NQETKEAIVVD-----PADN---ADFI---YKS 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-----VYERVS 115 + + IF+TH H DH GAL DL V YAS +LE++ ++ Sbjct: 45 LTDAGLTCVGIFLTHGHYDHIGALDDLRKLTGVKAYASEDEKQVLESRTGNLSAMFGHPL 104 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAI 173 + I Q G +V V + + V M G+++ TGD + Sbjct: 105 ETSADIYLQDGQEVAVLGTVVRCISVPGHTVGGMCYYF--AEGHLLFTGDTLFASSVGRS 162 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 ++ L +L L ++ A+ G + + Sbjct: 163 DFPTGNEQDLLEAIETKLLVLPEET--AVYPGHNGTSR 198 >gi|154497025|ref|ZP_02035721.1| hypothetical protein BACCAP_01318 [Bacteroides capillosus ATCC 29799] gi|150273424|gb|EDN00552.1| hypothetical protein BACCAP_01318 [Bacteroides capillosus ATCC 29799] Length = 209 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 17 IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 IG N ++G + ++D P D G+ + + + AIF+TH Sbjct: 19 IGTNCYIFGDDATKMGA--IVD-----PGGDAAGI------LAAVRGLGLTVSAIFLTHG 65 Query: 77 HEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH GAL +L L VPVY P + + + P + + G V VG + Sbjct: 66 HYDHVGALPELRKALPDVPVYLHPAEKAVRDGSL----IPDPGPTVDYGDGSTVAVGGLT 121 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +E + P + L + + TGD Sbjct: 122 VEVIHAPGHTPGGVCLKVGDT----LFTGD 147 >gi|294498331|ref|YP_003562031.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294348268|gb|ADE68597.1| Metallo-beta-lactamase superfamily [Bacillus megaterium QM B1551] Length = 282 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 61/150 (40%), Gaps = 18/150 (12%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 ++++D G+ P ++ + + K AI +THAH DH G++ + Sbjct: 47 NPDKDNSFVLVDAGM--PNSAS----MIIKEAEERFGKGKKPKAIILTHAHFDHIGSIIE 100 Query: 87 LWSFLHVPVYASPFAIGLLEAKRV--------YERVSKKIPCISFQAGDKVDVGAFSIES 138 L +PVYA P + + K+ + K+ + +D+G+ +++ Sbjct: 101 LVEKWQIPVYAHPLELPYVTGKKNYPTPDGTVEGGLVAKLS--PLFPTEAIDLGS-HVQA 157 Query: 139 VRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + S+P I +P + H ++ Sbjct: 158 LPADGSVPHMPQWEWIHTPGHSPGHISLFR 187 >gi|224476654|ref|YP_002634260.1| putative member of metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] gi|222421261|emb|CAL28075.1| putative member of metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] Length = 207 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 22/175 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y +++D P D + I + + K L AI +THAH DH GAL Sbjct: 16 YFIEDENNVLLVD-----PSSDGNKI------IQKLNEINKPLKAIILTHAHFDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 ++ VPVY + AK I + D +G F I Sbjct: 65 EVLEKFDVPVYLHSEEFDFFQDPSKNGSAKFKQYGFKPVISKAQPLSLDEGPNKIGGFEI 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + + P ++ V + + D ++L + I Sbjct: 125 DVLHTPGHSPGSLTYVFNDFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIQDKI 177 >gi|170072495|ref|XP_001870192.1| DNA cross-link repair 1A protein [Culex quinquefasciatus] gi|167868761|gb|EDS32144.1| DNA cross-link repair 1A protein [Culex quinquefasciatus] Length = 730 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 115/336 (34%), Gaps = 49/336 (14%) Query: 64 ERKNLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + F++H H DH G L P+ SP L+ A ++ Sbjct: 340 RYGDIAGVTHYFLSHFHADHYIG----LKKSFDKPLIMSPITASLVAAFI----NVDRVH 391 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVT 178 I + + + I ++ NH P + + + P N++HTGD++ Sbjct: 392 YILLDLHETIVLDGVRITALDANH-CPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEF 450 Query: 179 ---DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D +L + + ++ +++ + +N VL+ S Sbjct: 451 WNMDIHTL------YLDTTYLSTKYCFKDQWESVSDAVREVKTFLGRNIGRNVLIVCGSY 504 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 V + + +++A + G ++ + ++ V ++ + + D ++ Sbjct: 505 LVGKEKVWLELAARTGFRVWTEPNR-RKAVDAVAVECPLQTRGVIVDDPRDAQI---HVL 560 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + + E + + E + + + R G E + + Sbjct: 561 SMGKLAYDELVAYM-----DEH------PERECVLALRPS-GWEKNSRP---QYRGRINI 605 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V + S H ++L+R +++RP+ +++ Sbjct: 606 V-------GIEYSEHSSYDELRRFVRFLRPREVIST 634 >gi|306829562|ref|ZP_07462752.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] gi|304428648|gb|EFM31738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] Length = 269 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I+ID G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILIDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|322375299|ref|ZP_08049812.1| VicX protein [Streptococcus sp. C300] gi|321279562|gb|EFX56602.1| VicX protein [Streptococcus sp. C300] Length = 269 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K I++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKILVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENAD 166 >gi|241895841|ref|ZP_04783137.1| beta-lactamase superfamily I metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313] gi|241870884|gb|EER74635.1| beta-lactamase superfamily I metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313] Length = 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 20/174 (11%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 M N+ ++ L G G N+ + + +++D G+S + G+ + Sbjct: 1 MANDFKVSMLASGSKG----NVTFIE----TPQHNVLVDAGLS--GKKIAGL------MA 44 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 I + ++ A+F+TH H DH + L + +YA+ ++ K Sbjct: 45 QIGRSLTDVDALFVTHEHSDHIAGVGVLARKYGMDIYANQKTWTAMQNKI---GKINPEQ 101 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 F+ G +G IES V+H + D +D I Sbjct: 102 VQLFEPGQTKLMGDLDIESFSVSHDAADPQFYAFHHDNKTFAMLTDTGYVNDRI 155 >gi|227524020|ref|ZP_03954069.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227088759|gb|EEI24071.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 251 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 43/173 (24%) Query: 11 LGG--VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK-- 66 LGG G + L G+ +IDCG + + + + Sbjct: 14 LGGYPANGNGTSSYLLESGNFH----FLIDCGSA--------------ALLSLEEILDPL 55 Query: 67 NLMAIFITHAHEDH---YGALHDLW----SFLH---VPVYASPFAIGLLEAKRVYERV-- 114 L A+ +TH H DH G L W +P+Y K ++ + Sbjct: 56 KLDALILTHYHHDHTADVGVLQYYWQLHEKRYDQKCLPIYGHTL------DKINFDGLSW 109 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGD 165 +++ +++VG FSI +++H +P L I +V T D Sbjct: 110 PDSTKGVAYDPEKQLNVGPFSITFFKMHHPVP-AFGLRITEKATGKVLVFTAD 161 >gi|15924535|ref|NP_372069.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927125|ref|NP_374658.1| hypothetical protein SA1375 [Staphylococcus aureus subsp. aureus N315] gi|49483794|ref|YP_041018.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|57651938|ref|YP_186442.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87159893|ref|YP_494200.1| hypothetical protein SAUSA300_1505 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195352|ref|YP_500156.1| hypothetical protein SAOUHSC_01644 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268029|ref|YP_001246972.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150394097|ref|YP_001316772.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|151221661|ref|YP_001332483.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156979863|ref|YP_001442122.1| hypothetical protein SAHV_1532 [Staphylococcus aureus subsp. aureus Mu3] gi|161509774|ref|YP_001575433.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140035|ref|ZP_03564528.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314916|ref|ZP_04838129.1| hypothetical protein SauraC_01825 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732198|ref|ZP_04866363.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733205|ref|ZP_04867370.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus TCH130] gi|255006331|ref|ZP_05144932.2| hypothetical protein SauraM_07680 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425670|ref|ZP_05602094.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428331|ref|ZP_05604729.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430968|ref|ZP_05607348.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 68-397] gi|257433656|ref|ZP_05610014.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus E1410] gi|257436570|ref|ZP_05612614.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus M876] gi|257793621|ref|ZP_05642600.1| metallo-beta-lactamase [Staphylococcus aureus A9781] gi|258411079|ref|ZP_05681359.1| metallo-beta-lactamase [Staphylococcus aureus A9763] gi|258420117|ref|ZP_05683072.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258437377|ref|ZP_05689361.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|258443583|ref|ZP_05691922.1| metallo-beta-lactamase [Staphylococcus aureus A8115] gi|258446790|ref|ZP_05694944.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6300] gi|258448704|ref|ZP_05696816.1| metallo-beta-lactamase [Staphylococcus aureus A6224] gi|258450626|ref|ZP_05698688.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|258453521|ref|ZP_05701499.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|262051207|ref|ZP_06023431.1| hypothetical protein SA930_1638 [Staphylococcus aureus 930918-3] gi|269203173|ref|YP_003282442.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|282893046|ref|ZP_06301280.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8117] gi|282904127|ref|ZP_06312015.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus C160] gi|282905954|ref|ZP_06313809.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908864|ref|ZP_06316682.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911183|ref|ZP_06318985.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914352|ref|ZP_06322138.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M899] gi|282919321|ref|ZP_06327056.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C427] gi|282920094|ref|ZP_06327819.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9765] gi|282924646|ref|ZP_06332314.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C101] gi|282928178|ref|ZP_06335783.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A10102] gi|283958309|ref|ZP_06375760.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284024604|ref|ZP_06379002.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus 132] gi|293503426|ref|ZP_06667273.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510443|ref|ZP_06669149.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus M809] gi|293530983|ref|ZP_06671665.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M1015] gi|294848576|ref|ZP_06789322.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9754] gi|295406668|ref|ZP_06816473.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8819] gi|295428123|ref|ZP_06820755.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275098|ref|ZP_06857605.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus MR1] gi|297245750|ref|ZP_06929615.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8796] gi|297590911|ref|ZP_06949549.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|304380866|ref|ZP_07363526.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13701343|dbj|BAB42637.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247316|dbj|BAB57707.1| similar to metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Mu50] gi|49241923|emb|CAG40617.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|57286124|gb|AAW38218.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87125867|gb|ABD20381.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202910|gb|ABD30720.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741098|gb|ABQ49396.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149946549|gb|ABR52485.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|150374461|dbj|BAF67721.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721998|dbj|BAF78415.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368583|gb|ABX29554.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723987|gb|EES92716.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728745|gb|EES97474.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus TCH130] gi|257271364|gb|EEV03510.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275172|gb|EEV06659.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278398|gb|EEV09034.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 68-397] gi|257281749|gb|EEV11886.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus E1410] gi|257283921|gb|EEV14044.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus M876] gi|257787593|gb|EEV25933.1| metallo-beta-lactamase [Staphylococcus aureus A9781] gi|257840229|gb|EEV64693.1| metallo-beta-lactamase [Staphylococcus aureus A9763] gi|257843828|gb|EEV68222.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257848582|gb|EEV72570.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|257850989|gb|EEV74932.1| metallo-beta-lactamase [Staphylococcus aureus A8115] gi|257854365|gb|EEV77314.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6300] gi|257857982|gb|EEV80871.1| metallo-beta-lactamase [Staphylococcus aureus A6224] gi|257861784|gb|EEV84583.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|257864252|gb|EEV87002.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|259160844|gb|EEW45864.1| hypothetical protein SA930_1638 [Staphylococcus aureus 930918-3] gi|262075463|gb|ACY11436.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|269941035|emb|CBI49419.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus TW20] gi|282313481|gb|EFB43876.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C101] gi|282317131|gb|EFB47505.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C427] gi|282321533|gb|EFB51858.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M899] gi|282324878|gb|EFB55188.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282327128|gb|EFB57423.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331246|gb|EFB60760.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282589985|gb|EFB95067.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A10102] gi|282594442|gb|EFB99427.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9765] gi|282595745|gb|EFC00709.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus C160] gi|282764364|gb|EFC04490.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8117] gi|283470823|emb|CAQ50034.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ST398] gi|283790458|gb|EFC29275.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817227|gb|ADC37714.1| Hydroxyacylglutathione hydrolase [Staphylococcus aureus 04-02981] gi|290920251|gb|EFD97317.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095092|gb|EFE25357.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466807|gb|EFF09327.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus M809] gi|294824602|gb|EFG41025.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9754] gi|294968415|gb|EFG44439.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8819] gi|295128481|gb|EFG58115.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297177401|gb|EFH36653.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8796] gi|297575797|gb|EFH94513.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|298694827|gb|ADI98049.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ED133] gi|302751377|gb|ADL65554.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340593|gb|EFM06527.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437987|gb|ADQ77058.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH60] gi|312829934|emb|CBX34776.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129823|gb|EFT85813.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS03] gi|315195447|gb|EFU25834.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS00] gi|315198760|gb|EFU29088.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS01] gi|320140570|gb|EFW32424.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144107|gb|EFW35876.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323440443|gb|EGA98155.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O11] gi|323443217|gb|EGB00835.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O46] gi|329314222|gb|AEB88635.1| Beta-lactamase domain protein [Staphylococcus aureus subsp. aureus T0131] gi|329727371|gb|EGG63827.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21172] gi|329728473|gb|EGG64910.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329730841|gb|EGG67219.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 207 Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESEKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ VPVY L+ K + ++ + ++ F Sbjct: 65 DIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSTEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIQDKIFEL 180 >gi|319892592|ref|YP_004149467.1| Hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] gi|317162288|gb|ADV05831.1| Hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] Length = 209 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P ++ +D + K L+AI +THAH DH AL Sbjct: 16 YFVENDTEMILID-----PAGEIDKIDKKI------KQSGKQLIAILLTHAHFDHIAALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ + VPVY L AK + A D +G F+I Sbjct: 65 DVLTRYDVPVYMHAEEFSFLTDPQKNGSAKFKDYGLPIITSQAEPHALDEGIQRIGQFNI 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 +++ P ++ V Sbjct: 125 QTLHTPGHSPGSLTYVFDEFA 145 >gi|312129107|ref|YP_003996447.1| RNA-metabolising metallo-beta-lactamase [Leadbetterella byssophila DSM 17132] gi|311905653|gb|ADQ16094.1| RNA-metabolising metallo-beta-lactamase [Leadbetterella byssophila DSM 17132] Length = 473 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 80/499 (16%), Positives = 146/499 (29%), Gaps = 104/499 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDLVFPDITFIM 62 +L F G ++ +M L + +IDCG L + + + F Sbjct: 1 MKLTFY--GAAQKVAGSMFLLEFEDGYQA---LIDCGSEVEGNPRLTEEEFRYGNFPF-- 53 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------ 109 + + + +THAH DH G + +L+ V + + L E Sbjct: 54 -DASRVNVVILTHAHIDHSGQIPNLYQDGFEGQVLCTSPTMDLTEVLLYDAASLNARVVK 112 Query: 110 ---VYERVSKKIPCISFQ--------AGDKVDVGAFSIE------------SVRVNHSIP 146 R SKK Q + + E H + Sbjct: 113 SVEKSHRKSKKWKSKETQGLYLNRQVEEAMENFVPIAFEQRFKFKDDGFVTFYPAGH-LL 171 Query: 147 ETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 +V+ I +GD + +L D + L+ +ST Sbjct: 172 GAAHVVLEVKEGGEWKKIGFSGDIGRKNFTLLVDP--------KPIPQVDYLVMESTYGQ 223 Query: 203 REGTCI--SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS 260 R + + + I + KG ++V FS V R + ++ R G S Sbjct: 224 RNHEDSGDPAEILGEIIQAACVDVKGRLIVPAFS--VGRTQCLLYTL---NRLYYDKGIS 278 Query: 261 LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL-SRGEMRN 319 +V + + + K + ++ +E L L S E + Sbjct: 279 PIKVFTDS----PLAKASTKIYEKYRNRLNKEAQEFFEETDSLFDFENLHYLESNKESQL 334 Query: 320 VKLAEKDTVIFSSR-AIPGN--EVAIGHIKNRLVEQGVRVIAEDAEC-----------PV 365 V + +I SS I G E I + V + + + Sbjct: 335 VSTHAEPCIIISSSGMIKGGRVEYHIEKNIENPYATILMVGYANEDSVGGKLLSGEQRQL 394 Query: 366 HV-----------------SGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELA 405 H+ SGH +DL + +P + L +HG+ ++ K++ Sbjct: 395 HIRNKKLEVNAKIKKTDIFSGHGDRDDLLAFAKIQKPELLKKLFLVHGDLNAMLNFKQIL 454 Query: 406 LQEGIACVPPVRNGKMLRL 424 + G V + L Sbjct: 455 NESGYEDVELPARYQTFEL 473 >gi|282916815|ref|ZP_06324573.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus D139] gi|283770621|ref|ZP_06343513.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus H19] gi|282319302|gb|EFB49654.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus D139] gi|283460768|gb|EFC07858.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus H19] Length = 207 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESEKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ VPVY L+ K + ++ + ++ F Sbjct: 65 DIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSAEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIQDKIFEL 180 >gi|167749550|ref|ZP_02421677.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] gi|167657474|gb|EDS01604.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] Length = 263 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 12/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 +++D G SF L I F + + A+ +TH H DH AL + VP Sbjct: 25 VLVDAGCSF---KALREGLALCGIPF-----EAVKAVLVTHEHIDHTKALGQITKRTSVP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 VYAS K +++ ++ I + K I+ H E++ ++ Sbjct: 77 VYASDGTA----RKLFSDKLVEQTAVIHPLSEIKSVPVDMDIDFFHTPHDAAESVGYTLK 132 Query: 155 SPVGNIVHTGDWKL 168 + D Sbjct: 133 FGEHKVACCTDLGY 146 >gi|296158997|ref|ZP_06841825.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gi|295890872|gb|EFG70662.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 257 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG S + + +T + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCGFSAKEVER--------RLTRLGASV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI ITH H DH G+ L +P+Y S + A I Sbjct: 51 EGLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DKADIDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G SI V H E + V + + D Sbjct: 105 DEAVAIGDLSILPYTVPHDAREPLQYVFSNGASRLGVLTDVGT 147 >gi|91775194|ref|YP_544950.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91775338|ref|YP_545094.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709181|gb|ABE49109.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709325|gb|ABE49253.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|167042413|gb|ABZ07139.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine microorganism HF4000_ANIW133B20] Length = 257 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 23/163 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N + +++DCG G+ I + + Sbjct: 1 MRFASLG-SGSTG-NGLVIE----QDSTRLLLDCG--------FGLRDAIRRIARLGLQP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPV---YASPFAIGLLEAKRVYERVSKKIPCIS 122 + + I +TH H+DH G + L + +PV Y + L K + + Sbjct: 47 EEINGILVTHEHDDHTGGVFKLANRYRIPVWLTYGTYITSQKLMPKELEFDL------HI 100 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +G I+ V H E + + D Sbjct: 101 IDSHQPFSIGNLQIQPYPVPHDAREPVQFTFEDGKHKLGVLTD 143 >gi|15895540|ref|NP_348889.1| metallo-beta-lactamase superfamily Zn-dependent hydrolase [Clostridium acetobutylicum ATCC 824] gi|15025276|gb|AAK80229.1|AE007728_8 Predicted Zn-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] gi|325509688|gb|ADZ21324.1| Zn-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum EA 2018] Length = 199 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 13/137 (9%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + S + ++ID G D + NL + +TH H D Sbjct: 14 NCYIL--VDEKSNESVVIDPG-----------DAPQAILEAFKDTETNLKFVLLTHGHAD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H A+ +L +V VY + L+E + GD++ G I+ + Sbjct: 61 HTAAVAELKKEYNVDVYMNKDDCKLIENGEYMFGDKSENATKYVDDGDELQFGELKIKCI 120 Query: 140 RVNHSIPETMALVIRSP 156 + P M ++ + Sbjct: 121 KTPGHTPGGMCYLVDNY 137 >gi|312885688|ref|ZP_07745322.1| RNA-metabolising metallo-beta-lactamase [Mucilaginibacter paludis DSM 18603] gi|311301784|gb|EFQ78819.1| RNA-metabolising metallo-beta-lactamase [Mucilaginibacter paludis DSM 18603] Length = 463 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 58/276 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G ++ +M L G I++DCG+ +D ++ FP + + Sbjct: 7 GAAQQVTGSMHLLEVGQYK----ILVDCGLDCERDHHVMLNENFPF------NPGEIDVV 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA---------KRVYE--------- 112 +THAH DH G L L + + +P L E R + Sbjct: 57 ILTHAHIDHSGNLPTLVRMGFNGQILCTPPTADLTEILLLDSVSIFMRKEQTSRKHNRKR 116 Query: 113 ----RVSKKIPCISFQAGDKVDV----------GAFSIESVRVNHSIPETMALVIRSP-- 156 R + D+ G + + V H + A++ Sbjct: 117 PGQGRQPLYLQKHVMDTVDRFITIGFNRPFRINGDIELTFIPVGHLLGAAAAVLTIDDNG 176 Query: 157 -VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG--TCISEKGI 213 I TGD + +L D + L + L+C+ST R ++ + Sbjct: 177 TEKTIAFTGDLGRKNYPVLN---DPEPL-----PPVDYLVCESTYGGRYHTKDKTIDETL 228 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + I G +++ FS + R ++++ + Sbjct: 229 VEVIDRACVKESGRLIIPAFS--IGRTQALVFSLNK 262 >gi|225389087|ref|ZP_03758811.1| hypothetical protein CLOSTASPAR_02833 [Clostridium asparagiforme DSM 15981] gi|225044851|gb|EEG55097.1| hypothetical protein CLOSTASPAR_02833 [Clostridium asparagiforme DSM 15981] Length = 535 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 66/481 (13%), Positives = 143/481 (29%), Gaps = 107/481 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L F+ G E+ + G +++DCG+ + L P Sbjct: 2 QMKLTFI--GADHEVTGSCHYLEVG----NTKLLVDCGMEQGNNVYENAPLPVPY----- 50 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVY 111 + + +THAH DH G L L++ + + L ++ Sbjct: 51 ---NQIDYVLLTHAHIDHAGLLPWLYAKGFKGRIITTYATADLCNIMLVDSAHIQEMESE 107 Query: 112 ERVSK----------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + K K+ + ++ V H + + Sbjct: 108 WKNRKARRAGRSEVEPLYTIDDALGVLKLFEGVAYSQMFKLNSDITLRFTDVGH-LLGSA 166 Query: 150 ALVIRSPVG----NIVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 ++ + + IV +GD + + D+ ++ +ST R Sbjct: 167 SIEVWATEDGVTKKIVFSGDIGNQNKPLIRNPQYIDEA----------DYVIMESTYGNR 216 Query: 204 EGTCISEKG-IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS-L 261 + I + G V++ F+ V R + ++ +I + ++ G Sbjct: 217 HHKKHVDHVPELAQIIQETLDRGGNVVIPAFA--VGRTQELLYFIRRIKEENMIQGHDGF 274 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNV 320 + V + V +L +++ Y E ++ G L ++ E +N+ Sbjct: 275 EVYVDSPLAVEATHVFKLNMAEC----YDDETKALVERGINPIDFPGLKLSITSDESKNI 330 Query: 321 KLAEKDTVIFSS------------------RAIPGN-------EVAIGHIKNRLVEQGVR 355 VI S+ R E +G + V+ Sbjct: 331 NFDTTPKVIISAAGMCDAGRIRHHLKHNLWRPESTIVFAGYQAEGTLGRLLEDGAP-AVK 389 Query: 356 VIAEDAECPVH------VSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 + E+ + H +SGH + L + P+ + +HG+ + + + Sbjct: 390 IFGEEIDVRAHIAHMEGISGHADKDGLLTWLLSFKERPRYVFTVHGDEENCTEFTRVLGE 449 Query: 408 E 408 E Sbjct: 450 E 450 >gi|82751148|ref|YP_416889.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] gi|82656679|emb|CAI81106.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] Length = 207 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESEKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ VPVY L+ K + ++ + ++ F Sbjct: 65 DIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSTEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIQDKIFEL 180 >gi|303229337|ref|ZP_07316127.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515873|gb|EFL57825.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 17/158 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + I+ D G+S + + G+ + D++ + IFI+H H Sbjct: 18 GNCTVI----KKGNSVILHDVGIS-CRRIVNGLKELHIDMS-------QVEGIFISHEHT 65 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY ++ K + K + +++G ++E Sbjct: 66 DHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKHQLVELT-KGSLELGNLTVEP 120 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 V+H + + + + S D + D IL Sbjct: 121 FSVSHDAADPIGINVYSGKDKATVVTDTGVITDDILHR 158 >gi|325265249|ref|ZP_08131974.1| metallo-beta-lactamase family protein [Clostridium sp. D5] gi|324029428|gb|EGB90718.1| metallo-beta-lactamase family protein [Clostridium sp. D5] Length = 536 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 54/401 (13%), Positives = 122/401 (30%), Gaps = 47/401 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + L + I++DCG+ D + PG L P+ Sbjct: 1 MKLTFI--GAAHEVTGSCHLLQAAGKN----ILVDCGMEQGPDLYENPG--LPIPET--- 49 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 ++ +F+THAH DH G L + + + L ++ Sbjct: 50 -----DIDYVFLTHAHIDHSGLLPLITKKGFKGQIITTYATADLCNIMLRDSAHIQEFEA 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ G E + V + + L++ + D I TD Sbjct: 105 -EWRNRKGRRAGQPVFEPIYVLQDALDAIELIVPCQYQERIRICD------GIEVRFTDV 157 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD---IMKNAKGCVLVTTFSSSV 237 L +G+ I + + + + I + A V+ +T+ + V Sbjct: 158 GHL--LGSASIEVWITEGETTKKIVFSGDVGNTNQPIIKDPSYTETADYVVIESTYGNRV 215 Query: 238 S---RIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 +I + D + + G+ + +V ++ + YP ++ Sbjct: 216 HSTEKIDYLKDFTKVLRETFERGGNVVIPSFAVGRTQEMLYFIREIKEKNLLKEYPDFEV 275 Query: 295 IV---IATGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 + +A + + + + + V + + +E + + N + Sbjct: 276 YLDSPLAIEATKVFTKNMRECFDEDAIKLVNQGINPLIFPGLKTSTTSEDS--RMINFIE 333 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + V + A + RP+ + Sbjct: 334 KPKVIISASGM-------CDAGRIRHHLKHNLWRPECTILF 367 >gi|320352973|ref|YP_004194312.1| RNA-metabolising metallo-beta-lactamase [Desulfobulbus propionicus DSM 2032] gi|320121475|gb|ADW17021.1| RNA-metabolising metallo-beta-lactamase [Desulfobulbus propionicus DSM 2032] Length = 462 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 70/490 (14%), Positives = 130/490 (26%), Gaps = 102/490 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L K I+IDCG+ ++ + D F + Sbjct: 1 MRITFHGAARNVTGSCHLVE----CRDKRILIDCGLYQGNREMDEENSN--DFGF---DP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKI 118 ++ + +TH H DH G + L V + L A+ E + Sbjct: 52 ASIDYLLLTHGHLDHCGRIPLLHRLGFRGTVLTTAATRELARLVMLDSARIQEEEARYRN 111 Query: 119 PCISFQAGDKVDVGA-----------------------------FSIESVRVNHSIPETM 149 S + + H I + Sbjct: 112 YKASKRRNREATFEPLYNTLDALNALDAFVDIAAFDQPHDLCPGIRTTFYDAGH-ILGSA 170 Query: 150 ALVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 +++ + ++ +GD D AIL D ++ +ST R Sbjct: 171 CILLELTEGTHQRRVLFSGDLGYDGRAILPDPA--------TPPQADTVIMESTYGDRLH 222 Query: 206 TCISEKGIKKNIYDI--MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-------------- 249 + E I++ I G VL+ +F+ + R + ++ + Sbjct: 223 KRL-EPSIEELFQAINTTIARNGNVLIPSFA--LERTQELLYYLREGIEQQRLPRHLQVY 279 Query: 250 ------------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 R V+S D + ++ + VI Sbjct: 280 LDSPMAISATQIFRRHRECFDEETWAVISAGQDPFELPGLEIIRDTTESMALKHVRGAVI 339 Query: 298 ATG----SQGEPRSAL-AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 G + G R L L R E V + + R I G E + + VE Sbjct: 340 IAGSGMCTGGRIRHHLRHNLWRREASVVFVGYAAEGTLARRIIEGEE--VVRVLQEDVEV 397 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIR-PQVLVAIHGEPLHLVAHKELALQEGIA 411 + S H +L + P+ +HGE + A + Sbjct: 398 NAEIYTIGG-----FSAHADQRELLAWHGRTGSPERTFLVHGEQEAMQALASRLTDTKVE 452 Query: 412 CVPPVRNGKM 421 + + Sbjct: 453 MPGLHESFDL 462 >gi|150388374|ref|YP_001318423.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948236|gb|ABR46764.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 207 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E++V G+ E Y + +S + ++ID G D + + Sbjct: 1 MKFEKIVV----GIEE----ANGYIFYDENSLEAVVIDPG-----------DEAKTFMKY 41 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERV 114 I K + I +TH H DH A L P+ A I L+ KR Y + Sbjct: 42 IDKRYLKPIGIILTHYHYDHIAAAEALKKKYQCPINAHKKEIDGLKDPEINYSKREYAKE 101 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 P + GD + VGA +E + P ++ L + ++ TGD Sbjct: 102 VSITPDVLLSHGDTISVGALQLEVIHTPGHTPGSICLAV--KDEKVIFTGD 150 >gi|258423198|ref|ZP_05686091.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9635] gi|257846648|gb|EEV70669.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9635] Length = 207 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESEKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ + VPVY L+ K + ++ + ++ F Sbjct: 65 DIVNRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSAEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIQDKIFEL 180 >gi|264678255|ref|YP_003278162.1| beta-lactamase [Comamonas testosteroni CNB-2] gi|262208768|gb|ACY32866.1| beta-lactamase-like protein [Comamonas testosteroni CNB-2] Length = 466 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 68/488 (13%), Positives = 126/488 (25%), Gaps = 91/488 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L +IDCG++ + + Sbjct: 1 MNITFHGAAQSVTGSCFLVEAHGCR----FLIDCGMAQGGREADEHNQQAFAFD-----A 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L + +THAH DH G L L + P+YA+ LLE + + Sbjct: 52 AGLDFVVLTHAHIDHSGLLPKLVAQGFKGPIYATLATKDLLEVLLKDSAHIQMMDAERAA 111 Query: 125 AGDKVDVGAF------------------SIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + G +++V HS A+++R + Sbjct: 112 RRRREGRGHEREPTAPLYSLAHVASTLEQVQAVPYGHSFEPHPAVMVRFQDAGHILGSAI 171 Query: 167 KLDDDAILGDVTDKDSLCAIGNEG---------------ILALMCDSTNAMREGTCISEK 211 A T L A G+ G L+ +ST R+ + Sbjct: 172 VELWLADGHGGT--RKLVASGDLGQPGRVILRDPTPILEADLLLIESTYGDRQHKSTGD- 228 Query: 212 GIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRSIIDI----------------------AE 248 +++ + + + A G V++ F+ V R + ++ Sbjct: 229 TLEELVEVVTRTAPHGNVVIPAFA--VGRTQELLYHFLQLIQQQRLPPVEIFVDSPMAVA 286 Query: 249 QIGRKIVLLG------SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + G L V + I +I+ A+G Sbjct: 287 ATDITLRHFGVFDEEARQLLGSVRRLKESPHIHFISDVEDSIKLNRIKSGAVIISASGMC 346 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 L L R + V+ G + + + + + Sbjct: 347 DA-GRVLHHLKNNLSR-----PECAVVICGFQAEG--SLGRRLVDGARQVRLFGDDVEVR 398 Query: 363 CPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 +H S H L PQ +HGE A L + V Sbjct: 399 AGIHTLGGFSAHADQQALLDWAAAFSRPPQQTFVVHGESHASRALATLLHERLHFTVQVP 458 Query: 417 RNGKMLRL 424 + ++ Sbjct: 459 QPAQVFEF 466 >gi|169828655|ref|YP_001698813.1| hypothetical protein Bsph_3172 [Lysinibacillus sphaericus C3-41] gi|168993143|gb|ACA40683.1| Protein yflN [Lysinibacillus sphaericus C3-41] Length = 281 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 12/82 (14%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHE 78 + YG P+++++++ID G+ +++ I+ + + AI +TH H Sbjct: 40 NIVLYGDPNTKEFVLIDAGMPKSAEEI---------ISVVEERFGSNAQPKAIILTHGHF 90 Query: 79 DHYGALHDLWSFLHVPVYASPF 100 DH G + +L ++PVYA Sbjct: 91 DHVGGIIELIKRWNIPVYAHAL 112 >gi|291531466|emb|CBK97051.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium siraeum 70/3] Length = 263 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 12/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 +++D G SF L I F + + A+ +TH H DH AL + VP Sbjct: 25 VLVDAGCSF---KALREGLALCGIPF-----EAVKAVLVTHEHIDHTKALGQITKRTSVP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 VYAS K +++ ++ I + K I+ H E++ ++ Sbjct: 77 VYASDGTA----RKLFSDKLVEQTAVIHPLSEIKSVPVDMDIDFFHTPHDAAESVGYTLK 132 Query: 155 SPVGNIVHTGDWKL 168 + D Sbjct: 133 FGEHKVACCTDLGY 146 >gi|259048132|ref|ZP_05738533.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] gi|259035193|gb|EEW36448.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] Length = 212 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 24/164 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL+ +P+G + E N+ + +++ ++ D G I + Sbjct: 1 MELLSIPVGRLEE---NVY---FLIDENKETVIFDPGAQAEDIKQL-----------IKE 43 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-------KRVYERVSK 116 E +AI +THAH DH GA+ L ++P+Y + L +K Sbjct: 44 EGLKPVAIVLTHAHGDHIGAVDALREEYNIPMYMNELEKVFLHDPELNRSYYSGENITTK 103 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + K VG+F E + P + R I Sbjct: 104 PADGYFPKKMGKWKVGSFEPELAHIPGHSPGGTIFIFRENGFVI 147 >gi|225387503|ref|ZP_03757267.1| hypothetical protein CLOSTASPAR_01256 [Clostridium asparagiforme DSM 15981] gi|225046433|gb|EEG56679.1| hypothetical protein CLOSTASPAR_01256 [Clostridium asparagiforme DSM 15981] Length = 373 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 63/412 (15%), Positives = 120/412 (29%), Gaps = 59/412 (14%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L+ GG GE G + L + ++ M+DCG+ ++ P Sbjct: 1 MYMDRLIVK--GGYGEHGRSCFLIPFA---QGRYYMLDCGIMDTDEN--------PWPEV 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + +F++H H+DH GA L S + A+ + L + Sbjct: 48 EAELLERTEYLFLSHCHKDHSGAFSRLVSRGFRGWLVAAGATVELARIR--------YNK 99 Query: 120 CISFQAGDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD-----D 171 I +G R H + I + ++GD++ D Sbjct: 100 VIQADPLSAWPMGLGRDLHFSCGRSGH-CVGGLWFHIWDSGKSCFYSGDYQPGPLAFAVD 158 Query: 172 AILGDVTDKDSL-CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + G D + CA + A S G CI++ ++ + + + +G L+ Sbjct: 159 QVKGRRADLAIVDCAHPDTQEDARALRSRILEWIGPCIADG--RRVVLPLPRYGRGLELI 216 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + D + V R +++ + Sbjct: 217 ALIKENFPQAEIAADQGFTAAVEQVCGYGEWLRAGREEQIRAFLEEQPEKRLERDVYD-- 274 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 ++ G + L+ E LA VI + R PG + + + Sbjct: 275 -----ILLLGDTHLEQERCRSLAERE-----LARGGLVIITGRVKPGG--FVQTLLDGKK 322 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHK 402 H H D + + Q +V H L Sbjct: 323 AVRA-----------HFPHHQSMGDFMALLEQNNFQTVVPFHNGRRELYFQA 363 >gi|321311964|ref|YP_004204251.1| putative metal-binding hydrolase [Bacillus subtilis BSn5] gi|291484925|dbj|BAI86000.1| hypothetical protein BSNT_03701 [Bacillus subtilis subsp. natto BEST195] gi|320018238|gb|ADV93224.1| putative metal-binding hydrolase [Bacillus subtilis BSn5] Length = 211 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y S + ++ D P + ++ +I ++ +AI +THAH DH GAL Sbjct: 16 YFLISDDQCLIFD-----PGGEGHKIN------QYIKEKGLTPLAILLTHAHFDHIGALD 64 Query: 86 DLWSFLHVPVYASP-----FAIGLLE--AKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 ++ +PVY L V+ K + ++++G F +E+ Sbjct: 65 EVREKWDIPVYLHQNEKNWLTDASLNGSGMLRGIEVTAKPADHLIEGDGELNIGPFHLET 124 Query: 139 VRVNHSIPETMALVIRSPVGNI 160 + P +++ ++ I Sbjct: 125 LFTPGHSPGSVSYYVKDADLVI 146 >gi|238018903|ref|ZP_04599329.1| hypothetical protein VEIDISOL_00763 [Veillonella dispar ATCC 17748] gi|237864387|gb|EEP65677.1| hypothetical protein VEIDISOL_00763 [Veillonella dispar ATCC 17748] Length = 268 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 25/169 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N + I+ D G+S +D+ + IFI+ Sbjct: 18 GNCTVI----KKGNSVILHDVGISCRRIVNGLKELHIDM------------AQVEGIFIS 61 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L L +PVY ++ K + K I + +G Sbjct: 62 HEHSDHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKNQLIELT-KGSLSLGNL 116 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +ES V+H + + + + + D + D+IL + D L Sbjct: 117 VVESFGVSHDAADPIGINVFAGKDKATVVTDTGVISDSILHRMDDTTLL 165 >gi|239816407|ref|YP_002945317.1| beta-lactamase domain protein [Variovorax paradoxus S110] gi|239802984|gb|ACS20051.1| beta-lactamase domain protein [Variovorax paradoxus S110] Length = 258 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 20/145 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N AL S +++DCG F L DI Sbjct: 2 LRFRSLG-SGSTG-NAALVESTSGGRTSRLLVDCG--FGLRQL--------DIRLAKAGL 49 Query: 66 K--NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + ++ A+FITH H DH G H L +PV+ S L R +E Sbjct: 50 EAGDIDAVFITHEHGDHIGCAHSLSRRSRIPVWMSEGTW-LATGARDFEG-----RLNLA 103 Query: 124 QAGDKVDVGAFSIESVRVNHSIPET 148 + + VG ++ V H E Sbjct: 104 RDDAEFAVGDIAVRPFTVPHDAREP 128 >gi|229916278|ref|YP_002884924.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229467707|gb|ACQ69479.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 205 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 48/153 (31%), Gaps = 20/153 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY ++ID PG D P ++ L A+ +THAH DH G + Sbjct: 15 GYVIEKDGTVVVID----------PGTDD--PRFFDTIERFGTLSAVLLTHAHFDHIGGI 62 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG------DKVDVGAFSIES 138 L VPVY L + +P S + D +++G Sbjct: 63 DALRERYQVPVYVHRLEADWLTDGEKNGASAFNLPMPSMKPSEKTYEGDVLEIGNIVFRI 122 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 P ++ L + I GD Sbjct: 123 YHTPGHSPGSVVLYM--DDERIAFCGDLIFKQS 153 >gi|306755663|sp|B0V2S2|DCR1B_DANRE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link repair 1B protein; AltName: Full=SNM1 homolog B gi|169145639|emb|CAQ15298.1| novel protein (zgc:154089) [Danio rerio] Length = 571 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 13/167 (7%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG---DK 128 F++H H DH L WS P+Y SP LL K ++ + I D Sbjct: 28 FLSHMHSDHTCGLSSTWSHR--PIYCSPLTAKLLRLKLQIKQKWIRPLEIGQDHMLMLDD 85 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P + + + G ++TGD++ + Sbjct: 86 LGKERLTVNLIDANH-CPGAVMFLFQGYFGTRLYTGDFRYTPSMLRVPCLQNHI------ 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 I L D+TN S + + I I+++ G +V S Sbjct: 139 -NIDVLYLDNTNCDPTRALPSRQQATQQIKQIIRDHPGYAVVIGLYS 184 >gi|327542031|gb|EGF28529.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47] Length = 465 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 36/239 (15%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + +++DCG +F +D P+ I + + A+ +TH H DH G + L + Sbjct: 43 DDSQSLLVDCG-TFQGEDARK----KPNPE-IEFSLRGIQALLLTHVHIDHAGRIPYLLA 96 Query: 90 F-LHVPVYASPFAIGLL-------------EAKRVYERVSKKIPC--ISFQAGDKVDV-G 132 P+ S LL +KR+ ++ +I + D G Sbjct: 97 AGFDHPILCSAPTAKLLPLVMEDALKIGFTRSKRLIKKFLGQIRKLLVPLPYHQWHDCPG 156 Query: 133 AFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + + H + + I V +GD + +L + Sbjct: 157 GVKVRLLPAGH-VLGSTMFEIELKDGRRAVFSGDVGAGTNPLLNPPVSPER--------A 207 Query: 192 LALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L+ +ST R +++ + + + + G +V FS + R ++++ Sbjct: 208 DLLVLESTYGDRLHPPKADRQAELEAVIRRTLDDSGVTIVPAFS--LGRTQALLYELNA 264 >gi|295398634|ref|ZP_06808659.1| beta-lactamase superfamily I metal-dependent hydrolase [Aerococcus viridans ATCC 11563] gi|294973122|gb|EFG48924.1| beta-lactamase superfamily I metal-dependent hydrolase [Aerococcus viridans ATCC 11563] Length = 271 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 23/154 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFIT 74 N + ++ I++D G F + G++ + ++FIT Sbjct: 21 GNATYIE----TPKRKILVDAG--FSGKKMKELLAGINRDI----------NEIDSLFIT 64 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH + L + VYA+ + +K V + GD + +G Sbjct: 65 HEHSDHIKGMGVLARKYDLNVYANEATWQAIGSKV---GVIPVEKQHVMEQGDILTLGDV 121 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 I S V+H E + D Sbjct: 122 DIVSYGVSHDAAEPQFYAFQKDDRQFTILTDTGY 155 >gi|332295296|ref|YP_004437219.1| hypothetical protein Thena_0447 [Thermodesulfobium narugense DSM 14796] gi|332178399|gb|AEE14088.1| hypothetical protein Thena_0447 [Thermodesulfobium narugense DSM 14796] Length = 261 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 40/174 (22%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK EL L G N L G + +ID GV + ++ Sbjct: 1 MKTVELNVLASSSSG----NSTLLRMGGYT----FLIDIGV---------------NCSY 37 Query: 61 IMK-------ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYE 112 + + +++ A+FITH H DH L ++PV+ + K E Sbjct: 38 LKRSLESLHLRVEDIDAVFITHEHADHVRGLEVFARNYCNIPVF--------IREKCFNE 89 Query: 113 RVSKKIPCISFQ-AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + FQ D+V + H + + + D Sbjct: 90 VLKRVESRNCFQILTDEVKFDNVKVSFFSTPHDAIDPIGYEFSCRDFCFSYITD 143 >gi|297844862|ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp. lyrata] gi|297336154|gb|EFH66571.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp. lyrata] Length = 547 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 121/394 (30%), Gaps = 34/394 (8%) Query: 72 FITHAHEDHYGAL-HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+THAH+DH + + + P+Y++ I LL + + + G V Sbjct: 30 FLTHAHKDHTVGISP--SNIVVFPIYSTSLTISLL---IQRHPQLDESFFVRIEIGQSVI 84 Query: 131 V----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----LDDDAILGDVTDKDS 182 V G F + + NH P + + GNI+HTGD + V + Sbjct: 85 VDDPDGQFKVTAFDANH-CPGAVMFLFEGSFGNILHTGDCRLTLDCLQSLPEKYVGRRHG 143 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + + L C + S+ + + + + N +V + + Sbjct: 144 VAPKCCLDYIFLDCTFGKSSHSQRFPSKHSAIRQVINCIWNHPDAPVVYLACDMLGQEDV 203 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY--PREQLIVIATG 300 +++++ G KI + + + +I + + S +L + Sbjct: 204 LLEVSRTFGSKIYV---DKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYERTSA 260 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 E RS L + + E K R V V E Sbjct: 261 KLAEARSKLQS------EPLIIRPSAQWYV-CDDEDDWESGSIQ-KQRKVRFSEAVKDEF 312 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----HGEPLHLVAHKELALQEGIACVPP 415 V S H +L+ Q + P+ +V+ E ++ + ++ Sbjct: 313 GLWHVCYSMHSSREELESAMQLLSPKWVVSTVPSCRAMELNYVKKNCFISRFSPDDPFWK 372 Query: 416 VRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGK 449 + + + + P V L +I Sbjct: 373 LLDID-MEVSPVAAADTHTVALSCCLMSEEIILD 405 >gi|284035970|ref|YP_003385900.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283815263|gb|ADB37101.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 255 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 21/148 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + R+ ++ID G+S + + + + + + AIF++H H Sbjct: 14 GNCYYVG----NEREAVLIDAGISCRETER--------RMERLGLSLQTVKAIFVSHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-IPCISFQAGDKVDVGAFSIE 137 DH + L +PV+ +P + + P +A + V +G I Sbjct: 62 DHIRGIPQLAKKHQIPVFITPGT-------LNNSGLPQTGFPLRPLRAYEPVWIGELCIT 114 Query: 138 SVRVNHSIPETMALVIRSPVGNI-VHTG 164 + +H + + ++ + V T Sbjct: 115 AFPKHHDASDPHSFLVAGRDTKVGVFTD 142 >gi|229146847|ref|ZP_04275212.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST24] gi|228636675|gb|EEK93140.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST24] Length = 239 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGLFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|206971234|ref|ZP_03232185.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|206734006|gb|EDZ51177.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] Length = 209 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYVQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 109 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 154 >gi|170069015|ref|XP_001869076.1| DNA cross-link repair 1A protein [Culex quinquefasciatus] gi|167865000|gb|EDS28383.1| DNA cross-link repair 1A protein [Culex quinquefasciatus] Length = 757 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 115/336 (34%), Gaps = 49/336 (14%) Query: 64 ERKNLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + F++H H DH G L P+ SP L+ A ++ Sbjct: 367 RYGDIAGVTHYFLSHFHADHYIG----LKKSFDKPLIMSPITASLVAAFI----NVDRVH 418 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVT 178 I + + + I ++ NH P + + + P N++HTGD++ Sbjct: 419 YILLDLHETIVLDGVRITALDANH-CPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEF 477 Query: 179 ---DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 D +L + + ++ +++ + +N VL+ S Sbjct: 478 WNMDIHTL------YLDTTYLSTKYCFKDQWESVSDAVREVKAFLGQNIGRNVLIVCGSY 531 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 V + + +++A + G ++ + ++ V ++ + + D ++ Sbjct: 532 LVGKEKVWLELAARTGFRVWTEPNR-RKAVDAVAVECPLQTRGVIVDDPRNAQI---HVL 587 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + + E + + E + + + R G E + + Sbjct: 588 SMGKLAYDELVAYM-----DEH------PERECVLALRPS-GWEKNSRP---QYRGRINI 632 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V + S H ++L+R +++RP+ +++ Sbjct: 633 V-------GIEYSEHSSYDELRRFVRFLRPREVIST 661 >gi|212703405|ref|ZP_03311533.1| hypothetical protein DESPIG_01448 [Desulfovibrio piger ATCC 29098] gi|212673150|gb|EEB33633.1| hypothetical protein DESPIG_01448 [Desulfovibrio piger ATCC 29098] Length = 536 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 62/292 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----------SFPKDDLPGVDLV 54 + LG + + + K +DCG+ P+ PG Sbjct: 1 MKVQFLGAAQTVTGSCYMIEAC----GKRFCVDCGMHQGNKAIEERNRNPRPYAPG---- 52 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 N+ I +THAH DH G L + P+Y + LL+ Sbjct: 53 ------------NIDFILVTHAHIDHSGLLPLMVREGFSKPIYCTKATSELLDIMLQDSA 100 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVN----------HSI-------PETMALVIRSP 156 +++ E++ H + P V Sbjct: 101 HIQEMEAQWEAKKYSRRGLKNPPEALYTTEDALKTAELLHPVAYHEDFEPAPGIKVTYYD 160 Query: 157 VGNIVHTGDWK-----LDDDAILGDVTDKDSLCAI------GNEGILALMCDSTNAMREG 205 G+I+ +G + D + D A+ + +ST R Sbjct: 161 AGHILGSGSLRLEVTEDDKTTSIIFSGDIGRPQALIVRDPESPPKADYIFMESTYGDRNH 220 Query: 206 TC--ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 IS++ + I + ++ I + + + G+ Sbjct: 221 KNEDISDQELADAIAYSYSKGEKVIIPAFAVERTQEILYCLHVLQSKGKLPA 272 >gi|209521132|ref|ZP_03269860.1| beta-lactamase domain protein [Burkholderia sp. H160] gi|209498442|gb|EDZ98569.1| beta-lactamase domain protein [Burkholderia sp. H160] Length = 257 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S +S +++DCG S + + +T + Sbjct: 1 MRFASLGSGSE--GNALLVEAHSGASTTRVLLDCGFSAREVER--------RLTRLGASA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI ITH H DH G+ L +P+Y S + A + Sbjct: 51 EHLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DEADVDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + + D Sbjct: 105 DEAVAIGELSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGT 147 >gi|254468458|ref|ZP_05081864.1| cAMP phosphodiesterase class-II [beta proteobacterium KB13] gi|207087268|gb|EDZ64551.1| cAMP phosphodiesterase class-II [beta proteobacterium KB13] Length = 256 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 60/192 (31%), Gaps = 38/192 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN F LG G +G + I+ID G D Sbjct: 1 MKNN---FKILGCSGSVGKGGYTTCFQI---NDDILIDAGSGLLDQDF------------ 42 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERV 114 E K + IF+TH+H DH + L + + V+ S I ++ + Sbjct: 43 --DELKKINKIFLTHSHLDHILGIPLLADLVGNYRDQPIEVFGSNDTIINIKKNIFNGVI 100 Query: 115 SKKIPCISFQAGDKVDV-----------GAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 I ++ + F I VNH++ I S I+ + Sbjct: 101 WPDFSVIPTESKPYLKFSSINTEIPKAVDQFKITPFYVNHTV-RCFGYKIESQDQAIIFS 159 Query: 164 GDWKLDDDAILG 175 GD ++ I Sbjct: 160 GDTGPSENLIRM 171 >gi|82524014|emb|CAI78693.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [uncultured gamma proteobacterium] Length = 426 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 62/414 (14%), Positives = 116/414 (28%), Gaps = 79/414 (19%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY--ERVSKKIPCI--- 121 + A+ ++HAH DH G + +L PVYA+P + L + K I + Sbjct: 15 VDAMLVSHAHMDHSGNIPNLVKKGFKGPVYATPPTVDLCQLMLRDSAHLQKKDIDWVNRI 74 Query: 122 ---------------------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 + + H I + ++ Sbjct: 75 RAKHHQPPMEPLYSMDDAEESLHYFQPVEYDKSFEVIPGVQVTFKEAGH-ILGSACILFE 133 Query: 155 SPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 + TGD IL D L + AL+ +ST R IS+ Sbjct: 134 INEKGRRIEMGFTGDLGRAGMPILR---DPVILREL-----DALIIESTYGNRSHDPISD 185 Query: 211 K--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSL 261 + K I ++ A G +++ F+ + R + +I + ++ + + Sbjct: 186 AGEEMAKTIREVAA-AGGKIIIPAFA--IGRTQELIYMLHKLYDQNRIPEIPVFIDSPLA 242 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------S 307 V + F + P ++ S E + S Sbjct: 243 VHATDVFRKYAAYYDREAFRIFLAQHNDPFAFQMLKYVESTEESKRLNGLAFPHIIISAS 302 Query: 308 ALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV-- 365 +A+ R E + E I + + + V Sbjct: 303 GMAEGGRILHHLANNIENPKTLILFVGFAAKETLARKIMDGNETVKIFGEEHRVKARVKI 362 Query: 366 --HVSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIACVP 414 + S H D+ + P + L +HGEP + ++ G V Sbjct: 363 LQNFSAHGDRRDIIEYVKMSSPAKLKNLFLVHGEPDQAIPLRDAFQSMGYQNVQ 416 >gi|320104457|ref|YP_004180048.1| RNA-metabolising metallo-beta-lactamase [Isosphaera pallida ATCC 43644] gi|319751739|gb|ADV63499.1| RNA-metabolising metallo-beta-lactamase [Isosphaera pallida ATCC 43644] Length = 470 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G ++ + L G I++DCG+ D DL P+ + Sbjct: 1 MRITFHGATRQVTGSSHLLDIG----DHRILLDCGL----YDSNRFDLDSPN-RRMPFNP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 ++L A+ ++HAH DH G L L PVY +P ++ Sbjct: 52 RSLDAVIVSHAHNDHIGRLPCLIRDGYTGPVYCTPATAEIMGIMLRD 98 >gi|291550015|emb|CBL26277.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Ruminococcus torques L2-14] Length = 534 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 65/474 (13%), Positives = 142/474 (29%), Gaps = 96/474 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + + + K +++DCG+ D + PG + Sbjct: 1 MKLTFV--GAAHEVTGSC----HFLQVAGKNVLVDCGMEQGPDLYENPG----------L 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +F+THAH DH G L L ++ + L ++ Sbjct: 45 PISATEVDYVFLTHAHIDHSGMLPKLAKDGFKGQIFTTYATADLCGIMLRDSAHIQEFEA 104 Query: 121 -------------------------------ISFQAGDKVDV-GAFSIESVRVNHSIPET 148 + Q G+++ + I V H + + Sbjct: 105 EWRNRKGRRAGKPEYEPVYEMQDALNAIELLVPCQYGERITICEGIQIRFTDVGH-LLGS 163 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 ++ + + + + D + + + ++ +ST R T Sbjct: 164 ASIEVWATEDGVTKKIVFSGDIGNLDQPIIKDPAYTESA----DYIVMESTYGNRLHTQE 219 Query: 209 SEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + I + G V++ +F+ V R + ++ +I K +L + Sbjct: 220 KPDYLGDFTRILKETFDKGGNVVIPSFA--VGRTQELLYFIREIKEKELLKE---YQNFE 274 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEM-RNVKLAEK 325 V +D + + + + + L ++ G L + + + + EK Sbjct: 275 VYLDSPLAIEATKIFTKNMRECFDEDALALVNAGINPLIFDGLKTATTSDDSKMINFIEK 334 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA--------------------------- 358 VI S+ + H+K+ L + ++ Sbjct: 335 PKVIISASGMCDAGRIRHHLKHNLWREECTILFVGYQAMGTLGRRLIEGEKNVKLFGEPI 394 Query: 359 ---EDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQ 407 E +SGH N L + + PQ + +HGE + + Sbjct: 395 EVKARIESLHGISGHADMNGLLKWLGAFKEAPQRVFVVHGEDTVTEEFAKTVEE 448 >gi|319787454|ref|YP_004146929.1| RNA-metabolising metallo-beta-lactamase [Pseudoxanthomonas suwonensis 11-1] gi|317465966|gb|ADV27698.1| RNA-metabolising metallo-beta-lactamase [Pseudoxanthomonas suwonensis 11-1] Length = 457 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 66/435 (15%), Positives = 124/435 (28%), Gaps = 87/435 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP-GVDLVFP-DITFIMKERKNLM 69 G G + +M L + + +++DCG+ ++ G FP D + Sbjct: 7 GAAGGVTGSMHLV----TVAGRRVLLDCGMLQGNREVEAGNAAAFPFDPASL-------D 55 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------------- 111 A+ +HAH DH G L L + P++ LL Sbjct: 56 AVVASHAHIDHVGRLPLLVARGFRGPIWLQRATADLLPVMLEDAASLALSEAERANRRLR 115 Query: 112 ERVSKKIPCISFQAGDKV--------------DVGAFSIESVRVNHSIPETMALVIRSPV 157 + P + Q V + + H I + + + Sbjct: 116 HGEPVRAPLFTMQDVAAVLELLRPLDYDARTTILPGVELALRDAGH-ILGSSIVELWGDA 174 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKK 215 +V +GD IL D T G ++ +ST R+ + + + + Sbjct: 175 RKLVFSGDLGPKGTPILRDPT--------AITGADLVVMESTYGDRDHRERASTVQELGE 226 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------------------GRKIVLL 257 + +G VL+ F+ V R + ++ + G+ + + Sbjct: 227 VFEHAWRE-RGTVLIPAFA--VGRSQELLYWFARYWNEWNLERWRIFLDSPMAGKVVAVY 283 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV--IATGSQGEPRSALAQLSRG 315 + A V K L + + + + I +G+ S +A R Sbjct: 284 ERHHELFDEQARQVWRQKPSPFRLPNLHYTDSTPASIGINAIESGAIVIAGSGMANGGRI 343 Query: 316 EM--RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SG 369 + R+ V+F G + R + +H S Sbjct: 344 QHHLRHRLGRRDTHVVFVGYQAEG--TLGRRLVERAPWVRIHGNDVRVAAQIHTVGGLSA 401 Query: 370 HPYPNDLKRMYQWIR 384 H L Y R Sbjct: 402 HTDQRGLVAWYGQFR 416 >gi|317480395|ref|ZP_07939495.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] gi|316903473|gb|EFV25327.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] Length = 255 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 79/259 (30%), Gaps = 60/259 (23%) Query: 5 ELVFLPLG---GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDLP 49 +L L G GV EIG + P + I+IDCG Sbjct: 3 KLRILGSGTSTGVPEIGCTCPVCTSTDPRDNRLRASSLLHTDDAVILIDCG--------- 53 Query: 50 GVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIG 103 PD M + + + +TH H DH G L DL F +P+Y+ + Sbjct: 54 ------PDFREQMLRASSFEKIDGVLVTHEHYDHVGGLDDLRPFGRFADIPIYSDAYTAA 107 Query: 104 LLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 L A+ +I +AG + + +RV H + I + Sbjct: 108 HLRARMPYCFVDKVYPGVPRIYLQEVEAGQVFHINRTEVLPLRVMHGRLPILGYRIGGRL 167 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 G I TD + E + L NA+R + + I + + Sbjct: 168 GYI-----------------TDMHMMPEESYEQLKGLDVLVMNALRPKPHPTHQSISEAL 210 Query: 218 YDIMKN-AKGCVLVTTFSS 235 + AK + Sbjct: 211 EAAGRIGAKETYFIHMSHH 229 >gi|301605077|ref|XP_002932166.1| PREDICTED: DNA cross-link repair 1B protein isoform 1 [Xenopus (Silurana) tropicalis] gi|301605079|ref|XP_002932167.1| PREDICTED: DNA cross-link repair 1B protein isoform 2 [Xenopus (Silurana) tropicalis] Length = 517 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 89/264 (33%), Gaps = 18/264 (6%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQ 124 + F++H H DH L W+ P+Y SP +L+ K I Sbjct: 24 IRLFFLSHMHSDHTMGLSSTWNR---PLYCSPVTAKVLKYKLQVSNTWINPLEIGEPHML 80 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 D + ++ + NH P ++ + G I++TGD++ + Sbjct: 81 PLDNKGLETLTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRY--SPYMFCYPPLS--- 134 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 I L D+TN E S I +I++ ++ ++ + ++ Sbjct: 135 --NKTKIDVLYLDNTNCDPEQKLPSRLEATNMIKEIIEKHPDHDIMIGVY-NIGKESLLV 191 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 D+A+ +V+ L+ ++ + + ++ + ++ Sbjct: 192 DLAKTFKTWVVVSPQRLE-LLHILEMENVFTIEEGAGRIHLVDQSEVNYINMVRWNRVCP 250 Query: 305 PRSAL--AQLSRGEMRNVKLAEKD 326 + L ++ + ++V + Sbjct: 251 TLAILPTSRKVKLWHKDVHVVPYS 274 >gi|153854688|ref|ZP_01995938.1| hypothetical protein DORLON_01936 [Dorea longicatena DSM 13814] gi|149752792|gb|EDM62723.1| hypothetical protein DORLON_01936 [Dorea longicatena DSM 13814] Length = 535 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 108/377 (28%), Gaps = 82/377 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 L F G E+ + L + I+IDCG+ PD + + Sbjct: 1 MRLSFF--GAAHEVTGSCHLLEACGKN----ILIDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------ 110 ++ + I +THAH DH G + L + + L + Sbjct: 41 NQELPVTPGEVDYILLTHAHIDHSGNIPLLVKKGFSGEIITTFATADLCDIMLRDSAHIQ 100 Query: 111 ----YERVSKKIPCISFQAGDKVDV----------------------GAFSIESVRVNHS 144 R K + V + V H Sbjct: 101 EFEAEWRNRKARRSGEPEYEPIYTVADADAATKLLAPVDYGQKITLCDGIEVRFNDVGH- 159 Query: 145 IPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + + ++ + IV +GD + I+ D + ++ +ST Sbjct: 160 LLGSASIEVWVTEGEVSKKIVFSGDVGNKNQPIIK---DPQLVKE-----ADYVVIESTY 211 Query: 201 AMREGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLL 257 R + + I G V++ +F+ V R + I+ +I + ++ Sbjct: 212 GDRTHGEDIPDYVGEFTRILRETFQKGGNVVIPSFA--VGRTQEILYFIREIKEKNLLPE 269 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGE 316 + V + + + G + + + ++ G L ++ E Sbjct: 270 FPGFEVYVDSPLAIEATNVFNKNVK----GCFDEDAMALVNQGINPLLFQGLKTTITSDE 325 Query: 317 MRNVKLAEKDTVIFSSR 333 R + K VI S+ Sbjct: 326 SRQINFDTKPKVILSAS 342 >gi|187924523|ref|YP_001896165.1| beta-lactamase [Burkholderia phytofirmans PsJN] gi|187715717|gb|ACD16941.1| beta-lactamase domain protein [Burkholderia phytofirmans PsJN] Length = 257 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG S + + +T + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCGFSAKEVER--------RLTRLGASA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI ITH H DH G+ L +P+Y S + A + Sbjct: 51 EGLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DEADVDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G SI V H E + V+ + + D Sbjct: 105 DEAVAIGDLSILPYTVPHDAREPLQYVLSNGASRLGVLTDVGT 147 >gi|296333363|ref|ZP_06875816.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675131|ref|YP_003866803.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149561|gb|EFG90457.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413375|gb|ADM38494.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 211 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + ++ D P + ++ +I ++ +AI +THAH DH GAL Sbjct: 16 YFLINDDQCLIFD-----PGGEGNKIN------QYIKEKGLTPLAILLTHAHFDHIGALD 64 Query: 86 DLWSFLHVPVYASP-----FAIGLLE--AKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 ++ +PVY L V+ K + ++++G F +E+ Sbjct: 65 EVREKWDIPVYLHQNEKNWLTDASLNGSGMLRGIEVTAKPADHLIEGDGELNIGPFHLET 124 Query: 139 VRVNHSIPETMALVIRSPVGNI 160 + P +++ ++ I Sbjct: 125 LFTPGHSPGSVSYYVKDADLVI 146 >gi|299143494|ref|ZP_07036574.1| VicX protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517979|gb|EFI41718.1| VicX protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 265 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 68/223 (30%), Gaps = 20/223 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N Y I+ID G+S K + ++ I + AIF+TH H Sbjct: 16 GNCEYIEY----KNTKILIDAGLSGKKIEEL--------LSSINVSVDEIDAIFVTHEHL 63 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L ++ V+A+ L A + K F+ I Sbjct: 64 DHVKGVGVLSRRHNLKVFANNNT---LNAMLPITKEIKAENTYVFENERPFYFKDLYINP 120 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD-WKLDDDAILGDVTDKDSLCAIGNEGILA---- 193 + H I + T + +D +D L A + +L Sbjct: 121 IGTFHDCSCGSCFSIIGDKKISLVTDTGYINEDILEQIKDSDLYYLEANHDFEMLMNGSY 180 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 +S K + + ++ K V+++ S+ Sbjct: 181 SWSLKQRIASNKGHLSNKNAAEALDKLLNRKKEIVMLSHLSND 223 >gi|196248156|ref|ZP_03146858.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|196212940|gb|EDY07697.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 277 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 83/245 (33%), Gaps = 40/245 (16%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---YG 82 Y +++DCG G + T + +L A+ ++H H DH G Sbjct: 55 YLFEHDGFRLLVDCGS--------GALAKLQNYTTVE----DLDAVILSHYHYDHIADIG 102 Query: 83 ALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 L + L P+Y E + + + I++ ++ VG F Sbjct: 103 PLQYARLIHKTLGADLPVLPIYGHTEDEEAFE-RLTHNGI---TEGIAYDPKGELAVGPF 158 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 SI ++ H +P A+ I + IV+T D + + +G L Sbjct: 159 SITFLKTVHPVP-CYAMRITAGDNTIVYTADSSYIPEFVPF------------AKGADLL 205 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI 254 +C+ + + + I + A L T + R +I+ A + R + Sbjct: 206 ICECNFYAGQNAAPAGHMTSEEAATIAEGAGVGELWLTHLPHIGRHEQLIEEAGRTFRGV 265 Query: 255 VLLGS 259 + L Sbjct: 266 IRLAR 270 >gi|325856405|ref|ZP_08172121.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] gi|325483589|gb|EGC86561.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] Length = 251 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 43/221 (19%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 +++ ++IDCG PD + + + + + ITH H DH G + D Sbjct: 39 ETAQTRVIIDCG---------------PDFRQQMLPQPFRKIDGLLITHIHYDHVGGIDD 83 Query: 87 LWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIE 137 + + + VYA+ G L K+ + + +G + Sbjct: 84 VRPYCRLGDIDVYANADTCGGLRHNFPYCFAEHLYPGVPKLNLHALPPHSHIRIGDIEVV 143 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V V H + G + + D D L + EG+ L+ + Sbjct: 144 PVNVMH----GRLPIFGYRFGELAYITD---------MKTMDDAELPYL--EGVETLVVN 188 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + R S + I + + + +T + V Sbjct: 189 ALRWDRPHH--SHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 >gi|15645432|ref|NP_207606.1| hypothetical protein HP0813 [Helicobacter pylori 26695] gi|2313945|gb|AAD07862.1| conserved hypothetical protein [Helicobacter pylori 26695] Length = 205 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHY--GA-LHDLWSFLHVPVYASPFAI 102 G+D + P + ++++ KN AI ITH H DH GA L L + P+YA + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDGAQLSKLLK--NTPIYAPKDDV 80 Query: 103 GLLEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +LE + + + +++ +I+ P + I Sbjct: 81 FMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG---- 136 Query: 160 IVHTGDWKLDDD--AILGDVTDKDSLCA 185 ++ +GD+ +++ + Sbjct: 137 VIFSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|302039546|ref|YP_003799868.1| putative hydrolase with N-terminal DNA-binding domain [Candidatus Nitrospira defluvii] gi|300607610|emb|CBK43943.1| putative Hydrolase with N-terminal DNA-binding domain [Candidatus Nitrospira defluvii] Length = 287 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 24/161 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E VF +GG + GY + +++D ++ + V + Sbjct: 94 ETVFGSIGGYE-------VKGYVVHDRGEAVLVD--TAYNAGGMLAV---------LAGR 135 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + + VPVY + LL + + Q Sbjct: 136 NLRLRAICLTHGHSDHAEGIEAILKAYPVPVYLGSDDLDLLSWR------PAQQLLHVPQ 189 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ + VG ++ + P + + I GD Sbjct: 190 GGETLQVGGLTVRFMPTPGHTPGGVCYRVEQAGAPICFVGD 230 >gi|225175281|ref|ZP_03729276.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225169033|gb|EEG77832.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 531 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 71/504 (14%), Positives = 146/504 (28%), Gaps = 98/504 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F GG + + L ++ K ++IDCG+ F G L + + Sbjct: 1 MKLTFC--GGARTVTGSAFLLE----AAGKKLLIDCGL-FQG----GKRLRARNFSQYPY 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------- 109 + I +THAH DH G + L V A+P L + Sbjct: 50 NPAEIDYIILTHAHIDHSGLIPRLVKDGFRGRVLATPATTDLAKIMLPDSGHIQMMEAEW 109 Query: 110 -------------------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 + + ++ H + + Sbjct: 110 TNRKNKRAGRPEADPLYTVEDAEKALNYFDSIPYYQQENLSEDIILKFYDAGHILGSAIT 169 Query: 151 LVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-T 206 +I + +V TGD + I+ D D L L+ + T R+ Sbjct: 170 ELIITENGKPETVVFTGDLGKSNQPIIR---DPDVLEE-----ADYLIIEGTYGTRDHEE 221 Query: 207 CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVS 266 + + + N +G ++V +F+ V R + ++ + ++ + + Sbjct: 222 EEQKLEKLQTLIHETVNKQGNIVVPSFA--VGRTQEMLYFMSR-----LMRDHKIPNIPI 274 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKD 326 I ++F QL+ P + Q + E + + Sbjct: 275 YIDSPLAISATEIFSRHPECFDLQMRQLLHSGQDPFHFPEAIFTQ-TAEESQKINRLPGG 333 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA---------------------------- 358 +I S+ + H+K+ L + V+ Sbjct: 334 AMIISASGMADAGRIKHHLKHNLWREESTVLFVGYQAEGTLGRRIREGRKKVKIFGEEIM 393 Query: 359 --EDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVP 414 E S H +L + + P+ ++ +HGE L + ++ Sbjct: 394 VRARIEAIDGFSAHADRTELLKWLGKFQQMPKQVILVHGEEDVLTSFSAEIEKKFEVSTY 453 Query: 415 PVRNGKMLRLF--PDPIEIIDEVV 436 + + L P+ +E +V+ Sbjct: 454 IPNYMETMELKPLPEEVEDTSQVM 477 >gi|258512876|ref|YP_003186310.1| beta-lactamase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479602|gb|ACV59921.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 268 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 17/168 (10%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 G G ++ L S I++D G+S G L +E ++L A+ I Sbjct: 8 SGSNGNSLYL-----ESGDTRILLDAGLS-------GRQLETRLRAQCERELRDLTAVLI 55 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H+DH L L +Y + L AK R+ + + +AG+ +VG Sbjct: 56 THEHDDHVKGLVQLAKKCQASLYMTEGTYAGLPAK---ARLDEPDRVVHIRAGEPFEVGG 112 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 I V+H E +A + G++ D + D L D Sbjct: 113 VRITPFAVSHDAEEPVAFRFDTAEGSLAVVTDLGYVSDRQRELLRGCD 160 >gi|157737542|ref|YP_001490225.1| beta-lactamase-like protein [Arcobacter butzleri RM4018] gi|315637326|ref|ZP_07892544.1| metallo-beta-lactamase [Arcobacter butzleri JV22] gi|157699396|gb|ABV67556.1| beta-lactamase-like protein [Arcobacter butzleri RM4018] gi|315478369|gb|EFU69084.1| metallo-beta-lactamase [Arcobacter butzleri JV22] Length = 197 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 68/219 (31%), Gaps = 27/219 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ P+G N + K I+ID GV +++I Sbjct: 1 MEIKLHPMGDYQ---TNCYIV----TIDNKDIIIDPGVG--------------ALSWIEA 39 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 KN +A+ TH H DH + + + +Y +L + + Sbjct: 40 NAKNPIAVLNTHGHFDHVWSNQIVKETFDIKLYTPKDDSFMLTLNPYNMGMPPSYADVLV 99 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +++++ ++ P + I + + +GD+ D + D Sbjct: 100 NPDEEIELEGIKVKFHHFPGHTPGCSVIEIENS----LFSGDFIFKGTIGRFDFPNSD-- 153 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 + + I ++ N + ++ I + + Sbjct: 154 AKLMKQSINKILTWKNNFHVYPGHGDKTTLQNEIETLKQ 192 >gi|148543266|ref|YP_001270636.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184152677|ref|YP_001841018.1| hydrolase [Lactobacillus reuteri JCM 1112] gi|227364329|ref|ZP_03848422.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri MM2-3] gi|325683528|ref|ZP_08163044.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|148530300|gb|ABQ82299.1| beta-lactamase domain protein [Lactobacillus reuteri DSM 20016] gi|183224021|dbj|BAG24538.1| hydrolase [Lactobacillus reuteri JCM 1112] gi|227070642|gb|EEI08972.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri MM2-3] gi|324977878|gb|EGC14829.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 268 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 17/155 (10%) Query: 29 PSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 + I+ID G+S ++ + +D K++ AIF+TH H DH + Sbjct: 24 ETRNHRILIDAGLSGKRIENLMKKIDRSL----------KDVDAIFVTHEHSDHTHGVGV 73 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 L + VYA+ + K D+G IES V+H Sbjct: 74 LARRYGMDVYANEGTWQAMADKV---GKIPLAQKHIIAPNTVKDLGDMDIESFAVSHDAA 130 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + D + D D Sbjct: 131 QPQFYQVHHNNKTFCIITDTGYVSDRVTGTIRNAD 165 >gi|291556286|emb|CBL33403.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium siraeum V10Sc8a] Length = 263 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 12/134 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 +++D G SF L I F + + A+ +TH H DH AL + VP Sbjct: 25 VLVDAGCSF---KALREGLALCGIPF-----EAVKAVLVTHEHIDHTKALGQITKRTSVP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 VYAS K +++ ++ I + K I+ H E++ ++ Sbjct: 77 VYASDGTA----RKLFSDKLVEQTAVIHPLSEIKSVPVDMDIDFFHTPHDAEESVGYTLK 132 Query: 155 SPVGNIVHTGDWKL 168 + D Sbjct: 133 FGEHKVACCTDLGY 146 >gi|219670911|ref|YP_002461346.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219541171|gb|ACL22910.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 270 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 27/144 (18%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + G+ ++ ++DCG+S +L DI + IFITH H Sbjct: 12 GNSIVVGH----EKRNFLVDCGISLKATLH---NLAILDIA-----PSEIEGIFITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-----RVSKKIPCISFQAGDKVDVGA 133 DH + + L +P+YAS AK E K + + D Sbjct: 60 DHIKGVGAVARKLKIPIYAS--------AKIWDELNPSIGKLKDEQRVVVR--DAFTCAG 109 Query: 134 FSIESVRVNHSIPETMALVIRSPV 157 + +H E+ + + Sbjct: 110 LRVRVFPTSHDSQESFGVRVEVEQ 133 >gi|227543743|ref|ZP_03973792.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri CF48-3A] gi|300908808|ref|ZP_07126271.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri SD2112] gi|227186311|gb|EEI66382.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri CF48-3A] gi|300894215|gb|EFK87573.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri SD2112] Length = 268 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 17/155 (10%) Query: 29 PSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 + I+ID G+S ++ + +D K++ AIF+TH H DH + Sbjct: 24 ETRNHRILIDAGLSGKRIENLMKKIDRSL----------KDVDAIFVTHEHSDHTHGVGV 73 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 L + VYA+ + K D+G IES V+H Sbjct: 74 LARRYGMDVYANEGTWQAMANKV---GKIPLAQKHIIAPNTVKDLGDMDIESFAVSHDAA 130 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + D + D D Sbjct: 131 QPQFYQVHHNNKTFCIITDTGYVSDRVEGTIRNAD 165 >gi|167035172|ref|YP_001670403.1| beta-lactamase domain-containing protein [Pseudomonas putida GB-1] gi|166861660|gb|ABZ00068.1| beta-lactamase domain protein [Pseudomonas putida GB-1] Length = 252 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --SAAQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G+ + +G+ + + RV H E + V+ D D +L D Sbjct: 97 --ACGESLRIGSLEVTAARVEHDAYEPLQYVVSDGQRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|300864833|ref|ZP_07109682.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] gi|300337175|emb|CBN54832.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] Length = 543 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 147/447 (32%), Gaps = 62/447 (13%) Query: 4 EELVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 EL LP G G E G+ L G + I++DCG+ DI+ ++ Sbjct: 1 MELECLPYGAGHAEDGL-CLLVRMG----QHRILLDCGLK--------------DISPLI 41 Query: 63 KERKNLMA--IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKI 118 K+L A +F THAH DH G L SF +P+YAS LL Sbjct: 42 SSEKSLPADLVFCTHAHPDHARGLLALHQSFPQLPIYASEVTTQLLALNWPELAASEHPR 101 Query: 119 PCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAI 173 C + V++ ++ H +P A+++ ++V+TGD+ L + + Sbjct: 102 FCQALPWHSPVELRRGLGVQLFPSGH-LPGAAAILLTYAAPHRTYSLVYTGDFFLSNSRL 160 Query: 174 LGDVT--DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 + + D L +L L A E + + I+ + + V Sbjct: 161 VEGLPLGDLRGL----KPDVLILEGSYGTARHPHRRQLENQLAERIHRAIAD---GYSVL 213 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDESFGL 288 +S++ + ++ + G L V A+ G ++ F + Sbjct: 214 LPTSTLGLGQELLMLLRSHH---YFTGRDLDIWVDGAVAQGCDAYLELLPHFPTAVQNFA 270 Query: 289 YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNR 348 + R L +LS + + A + + + Sbjct: 271 QHQPLFW------DERVRPRLRRLSPEQRGILGKAPCIIITDETADLSLYVTKQNGPWIL 324 Query: 349 LVEQGVRVIAEDAECPVHVSG-----------HPYPNDLKRMYQWIRPQVLVAIHGEPLH 397 L+ Q + + SG H ++ +RPQ ++ +HG P + Sbjct: 325 LLPQKPGYPPKGWPETLQGSGLRSVESYLLAEHSDGPGTTQLIHNLRPQHIIFVHGSPTY 384 Query: 398 LVAHKELALQEGIACVPPVRNGKMLRL 424 L L + G ++ L Sbjct: 385 LADLANLDELRNRYQLHTPAAGTLVEL 411 >gi|307704958|ref|ZP_07641846.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] gi|307621468|gb|EFO00517.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] Length = 269 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K ++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKFLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|198453817|ref|XP_001359351.2| GA10012 [Drosophila pseudoobscura pseudoobscura] gi|198132527|gb|EAL28496.2| GA10012 [Drosophila pseudoobscura pseudoobscura] Length = 686 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 104/328 (31%), Gaps = 53/328 (16%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+TH H DH G L P++ SP L++A ++ + Sbjct: 267 FLTHFHADHYIG----LTKKFAFPLFMSPLTARLVQAFIK----IDEMYIHEIDVDQTIL 318 Query: 131 VGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 V I + NH P + + S I+HTGD++ + + N Sbjct: 319 VDNIQITGIEANH-CPGALMFFFKLSSGECILHTGDFRASFEMESLPIF-------WNNI 370 Query: 190 GILALMCDSTN-AMREGTCISEKGIKKNIYDIMKNAKGC----VLVTTFSSSVSRIRSII 244 I L D+T + C + + + +Y + K + +L S + + + + Sbjct: 371 DIDLLYLDTTYLSGNYDFCHQTESVDRAVYMVQKFHERNPGKRILYVCGSYVIGKEKIWL 430 Query: 245 DIAEQIGRKIVLLG-SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 +AE+ + + + ++ L +I + + Sbjct: 431 TLAEKFSLTVWTEAHRRM--------AIDCLEWPDLQSRLNDDPYQANLHVIGMGKVTYL 482 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 Q + + +S+ G ++I I+ Sbjct: 483 VLAEYFKQFEDQYDMLLAIRP-SGWEKNSKPSYGRRISIIGIE----------------- 524 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+R ++I+P+ +++ Sbjct: 525 ---YSEHSSYKELERFVRFIKPRRIIST 549 >gi|21283226|ref|NP_646314.1| hypothetical protein MW1497 [Staphylococcus aureus subsp. aureus MW2] gi|49486381|ref|YP_043602.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297207736|ref|ZP_06924171.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911817|ref|ZP_07129260.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|21204666|dbj|BAB95362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49244824|emb|CAG43284.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887753|gb|EFH26651.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886063|gb|EFK81265.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] Length = 207 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + + I+ID P + + I + + K L AI +THAH DH GA+ Sbjct: 16 YFIENDKAVILID-----PSGESGKI------IKKLNQINKPLKAILLTHAHFDHIGAVD 64 Query: 86 DLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQ--AGDKVDVGAFSI 136 D+ VPVY L+ K + ++ + ++ F Sbjct: 65 DIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPIITSKVTPEKLNEGSTEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P ++ V + + D ++L + I L Sbjct: 125 NVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIQDKIFEL 180 >gi|328876594|gb|EGG24957.1| DNA repair metallo-beta-lactamase domain-containing protein [Dictyostelium fasciculatum] Length = 922 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 98/320 (30%), Gaps = 41/320 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L +SF + VY + L+ +K + + + + Sbjct: 315 FLTHFHSDHYVGLTKTFSFGN--VYCTEETGKLVHSKL----GVQPNFIKAMPWNRFITI 368 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + + NH P + ++ +HTGD++ + ++ + + Sbjct: 369 EGVRVAMLDANH-CPGSAMILFHVNNEYSLHTGDFRYHHRMKEYPLLKDIAISRLY---L 424 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 CD T ++ + + + I++ V F + I+ + Sbjct: 425 DNTFCDPTYVF-----PPQQEVIQEVVKIIQKENDGRTVFLFGTYTIGKERILMEVSKNQ 479 Query: 252 RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ 311 RK + + K++++ + ++ P L + Sbjct: 480 RKKICVSQDKKQIIACLDLDQTMFTTDETITPF-----------------HAVPMGTL-R 521 Query: 312 LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 R L + + + R G + I ++ V S H Sbjct: 522 FDSLRGRLEALKPRYGRVVAFRPT-GWTQSKKSITHQRYG-------AVTLYSVAYSEHS 573 Query: 372 YPNDLKRMYQWIRPQVLVAI 391 N+L + RP ++ Sbjct: 574 SYNELLQCIDHFRPTEIIPT 593 >gi|260911539|ref|ZP_05918125.1| metallo-beta-lactamase superfamily protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634329|gb|EEX52433.1| metallo-beta-lactamase superfamily protein [Prevotella sp. oral taxon 472 str. F0295] Length = 267 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 24/231 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ LG G G N Y + + ++ID GV G+ + Sbjct: 2 LNFISLG-SGSSG-NC----YYLYTQTEGLLIDAGV--------GIRTLKKHFREYGLSL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH H DH ++ L +P+YA+ +E + Sbjct: 48 AQIQNVLITHDHADHVKSVGSLSRDYGLPIYATHRVHVGIEKNYCVRCKVSPERLKLVEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G +G+F+I V H + + +R D +VTD+ + Sbjct: 108 GVTFRLGSFTITPFNVPHDSLDNVGYEVRYGDIVFCLLTDVG--------EVTDE--MKP 157 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 N ++ + + + +K+ I + T + + Sbjct: 158 FINAANYLVIEANHDVEMLSDGPYPRHLKERILGKTGHLSNMECAETLAQN 208 >gi|149182914|ref|ZP_01861372.1| hypothetical protein BSG1_07494 [Bacillus sp. SG-1] gi|148849363|gb|EDL63555.1| hypothetical protein BSG1_07494 [Bacillus sp. SG-1] Length = 211 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 30/173 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK + L PLG + N ++ ++ D G + I + Sbjct: 1 MKWKRL---PLGPLQ---TNCYCV---WNEKKECVIFDPG---EEAGKL--------IKW 40 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYAS-PFAIGLLEAKRVYERVSKKIP 119 + + +AI +THAH DH GA+ + +P+Y A L++ + Sbjct: 41 LRTNQLKPLAILLTHAHFDHIGAVDKVREAFEIPLYVHEKEAKWLMDPSLNGSQFFAMSE 100 Query: 120 CISFQAGDKV-------DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + D + VG F+ + P +++ P +V +GD Sbjct: 101 LVRMKPADYILTNEKTLSVGDFTFDLYETPGHSPGSISYY--YPEEQVVFSGD 151 >gi|30250218|ref|NP_842288.1| cAMP phosphodiesterase [Nitrosomonas europaea ATCC 19718] gi|30181013|emb|CAD86203.1| cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily [Nitrosomonas europaea ATCC 19718] Length = 254 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 57/179 (31%), Gaps = 37/179 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L LG G IG N + + I+ID G +D + Sbjct: 1 MKLKV--LGCGGGIGSNS---HTTAMLLDEDILIDAGTGV---GTLALDDLL-------- 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 + +F+TH+H DH + L + V+A P + L+ V Sbjct: 45 ---KIDHVFVTHSHLDHIAFIPFLVDTTGSLRDRPLIVHALPATLECLQKHIFNWHVWPD 101 Query: 118 IPCISFQAGDKVDVGAF-----------SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I + F I + H++P + + S ++V TGD Sbjct: 102 FSRIPDAVRPYMRYQPFAVGETIVLGSRRITPLPACHAVP-AVGFQLDSGQASLVFTGD 159 >gi|325269833|ref|ZP_08136443.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] gi|324987806|gb|EGC19779.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] Length = 251 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 43/221 (19%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 + I+IDCG PD + + + + + ITH H DH G + D Sbjct: 39 ETVHTRIIIDCG---------------PDFRQQMLPQPFRKIDGLLITHIHYDHVGGIDD 83 Query: 87 LWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIE 137 + + + VYA+ G L K+ + + +G + Sbjct: 84 VRPYCRLGDIDVYANADTCGGLRHNFPYCFAEHLYPGVPKLNLHALPPHSHIRIGDIEVV 143 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V V H + G + + D D L + EG+ L+ + Sbjct: 144 PVNVMH----GRLPIFGYRFGKLAYITD---------MKTMDDAELPYL--EGVETLVVN 188 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + R S + I + + + +T + V Sbjct: 189 ALRWERPHH--SHQLIPEAVEFSRRIGARRTYLTHLTHQVG 227 >gi|307721979|ref|YP_003893119.1| beta-lactamase domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306980072|gb|ADN10107.1| beta-lactamase domain protein [Sulfurimonas autotrophica DSM 16294] Length = 466 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 85/276 (30%), Gaps = 56/276 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G E+ + ++ G IMIDCG+ D+ D F E ++ + Sbjct: 8 GATKEVTGSCHVFEVGGVK----IMIDCGMFQGLDE----DKNEEAFYF---EPASIDYL 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------------- 105 +THAH DH G + L +YA+ + L Sbjct: 57 LVTHAHLDHVGRIPKLVKEGFKGKIYATSATMDLAQIILMDSAKIMNEDFQTRYRKALRK 116 Query: 106 --EAKRVYERVSKKIPCISFQAGDKVD---------VGAFSIESVRVNHSIPETMALVIR 154 E K +FQ + ++ S H I + + + Sbjct: 117 GREKKLSKPLYEPLDVEKTFQMMEWINPEYDKYYNLCEGVSFIYRNAGH-ILGSAFIELS 175 Query: 155 SPVGNIVHTGDWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGI 213 + HT + D + + + + + +L ++T R+ + I Sbjct: 176 YMEKSDSHTIVFSGDIGNDNGLVMPNLNK-----CDKTQSLYVETTYGDRDH-QPIDATI 229 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 K+ I+K V S +V R + ++ I Sbjct: 230 KEFKDVIVKTLNSHGNVLIPSFAVERTQELLCILRD 265 >gi|255591220|ref|XP_002535469.1| conserved hypothetical protein [Ricinus communis] gi|223523017|gb|EEF26916.1| conserved hypothetical protein [Ricinus communis] Length = 218 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 3/125 (2%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I ++ ++L AI ITH H DH + + H+ +YA+ L++ Sbjct: 18 IDRKPEDLDAILITHEHSDHIKGVGVMARKYHLDIYANEKTWQLMDE-CNMLGKLDASQK 76 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 FQ + G IES V+H + I + V D + D + Sbjct: 77 HIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTGSYPWS 136 Query: 179 DKDSL 183 K + Sbjct: 137 LKQRI 141 >gi|242373849|ref|ZP_04819423.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis M23864:W1] gi|242348403|gb|EES40005.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis M23864:W1] Length = 207 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + D + + + K L A+ +THAH DH GAL Sbjct: 16 YFIENDDSVILID-----PSSES---DKII---KKLNQINKPLKAVLLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ + VPVY L+ K + + + + + ++ F Sbjct: 65 DIVTKYDVPVYMHEDEFDFLQDPEKNGASKFKQYGMPQVVSNAKPLSINEGPAEIKGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + P +++ V + + D ++L + + L Sbjct: 125 NVLHTPGHSPGSLSYVFDEFAVVGDTLFNNGIGRT--DLYKGDYETLVDSIKDKLFEL 180 >gi|288553566|ref|YP_003425501.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Bacillus pseudofirmus OF4] gi|288544726|gb|ADC48609.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Bacillus pseudofirmus OF4] Length = 244 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 71/244 (29%), Gaps = 41/244 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 GY +++DCG + +DL +L + ++H H DH Sbjct: 21 GYLLEHGSTKLLLDCGSGVVSNVQKYIDL------------NDLNGVVLSHYHHDHFADI 68 Query: 82 GALHDL--------WSFLHVPVYASPF-AIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 G L +YA K Y+ + K + + +G Sbjct: 69 GPLQYAQIVNKGMGKRKKDFTIYAHQEDTASF--NKLAYKDLVKSVAYNERAP---LKIG 123 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F+ + H +P A+ I IV+T D L N L Sbjct: 124 PFTFYFFKTQHPVP-CYAMKITCEGKQIVYTADSSY-----------FAGLADFANGCDL 171 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + S + + + + ++++ + ++ E+ R Sbjct: 172 VITECSGYSGDHVGQYGHMNSEDAAKLAVNSGIEKIILSHLPHHGDHEQLKREVEERFNR 231 Query: 253 KIVL 256 ++L Sbjct: 232 IVLL 235 >gi|304310918|ref|YP_003810516.1| Metallo-beta-lactamase superfamily protein [gamma proteobacterium HdN1] gi|301796651|emb|CBL44863.1| Metallo-beta-lactamase superfamily protein [gamma proteobacterium HdN1] Length = 473 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 66/493 (13%), Positives = 142/493 (28%), Gaps = 103/493 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 +L F G E+ + L + I+++CG+ + + D F Sbjct: 3 KLTFY--GAAKEVTGSCYLLE----TRHSRILMECGMHQGGNAAERRN----DEPFPFDP 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------------- 110 R + A+ ++HAH DH G L L H P+YA+ LL Sbjct: 53 RS-IDAVVLSHAHMDHSGLLPKLVKEGFHGPIYATDATRRLLAIMLRDGANLYLRDLENH 111 Query: 111 ------------------YERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMAL 151 + C+S + +G + + H I + + Sbjct: 112 NRRLQRAGKKLLHPRYGLEDVNKALRLCVSVGYHREESIGEDITFQFHNAGH-ILGSAIV 170 Query: 152 VIRSPV------GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + IV +GD + D++L D ++ +ST R+ Sbjct: 171 ELNIQEGGDEKPKKIVFSGDLG-NPDSVLMPTWDT-------LTDADLVLLESTYGDRDH 222 Query: 206 TC--ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-----RKIVLLG 258 ++ + + + K G V++ F+ V R + ++ + R+ + Sbjct: 223 RQIGATKDELAEVLNQACKEG-GNVMIPAFA--VGRAQELLYYLAMLNEEGRLRQPHIFL 279 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 S + + + P + + + R+ + E Sbjct: 280 DSPMAIEVTEVYRDYMSLLDQNDIQRILKKSPNGKSRFLPRQLLPQLRATP---TVEESM 336 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA-------------------- 358 + +++++ + + + H+K L + V+ Sbjct: 337 MINRFPRESIVIAGSGMCNGGRIVHHLKYNLWRRESHVVFVGFQAQGTLGRLLVDGAERV 396 Query: 359 ------EDAECPVHV----SGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELALQ 407 +H S H + L +P + +HGE +A + + + Sbjct: 397 KIFGQEVVVNAKIHTLGGFSAHAGQSQLVEWMSHFQKPVRVCLVHGEEHAQIALQSVLKE 456 Query: 408 EGIACVPPVRNGK 420 G Sbjct: 457 RLALNAEIHAEGD 469 >gi|295657429|ref|XP_002789283.1| endoribonuclease ysh1 [Paracoccidioides brasiliensis Pb01] gi|226283953|gb|EEH39519.1| endoribonuclease ysh1 [Paracoccidioides brasiliensis Pb01] Length = 892 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 39/238 (16%) Query: 37 IDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-- 94 +D G+ K+ P ++ + I+H H DH L + S + Sbjct: 56 LDAGMHPAKEGF----AALPFFDDFD--LSSVDILLISHFHLDHSAGLPYVLSKTNFKGR 109 Query: 95 VYASPFAIGLLEAKR---------------------VYERVSKKIPCISFQAGDKVDVGA 133 V+ + + + E +S + + + Sbjct: 110 VFMTHATKAIYKWLIQDNVRVSNTSSSSDQRTTLYTEEEHLSTLPQIEAIDFNTTHTINS 169 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE-GIL 192 I H + VI NI+ TGD+ ++D L + I Sbjct: 170 IRITPFPAGH-VLGAAMFVISIAGLNILFTGDYSREEDRHLIS-------AEVPKGIKID 221 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ +ST + E+ + I V ++ R + ++ I ++ Sbjct: 222 VLITESTFGISSNPPRLERE-AALMKSITTILNRGGRVLMPVFALGRAQELLLILDEY 278 >gi|295695179|ref|YP_003588417.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] gi|295410781|gb|ADG05273.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] Length = 298 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 18/148 (12%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N+ L G ++ID G S P+ P D V + ++ I +TH H Sbjct: 22 GTNLFLVSDGGEG----LVIDAGYSDPEALRPLTDAV-------RERNLHITGILLTHHH 70 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L PV+ P + R+ + G VG + Sbjct: 71 PDHAAGAGYLAELWDCPVHVHPADAEAVRQYVPEPRLRPDLV-----EGTTRQVGEVRLV 125 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ P L P ++ TGD Sbjct: 126 ALETPGHTPG--HLCFWEPTAKVLFTGD 151 >gi|300856532|ref|YP_003781516.1| putative Zn-dependent hydrolase [Clostridium ljungdahlii DSM 13528] gi|300436647|gb|ADK16414.1| putative Zn-dependent hydrolase [Clostridium ljungdahlii DSM 13528] Length = 199 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 17/200 (8%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + K ++ID P DD+ + I I + + I +TH H D Sbjct: 14 NCYIL--ADEKEGKSVVID-----PGDDVKDI------IDAIDASKTKVEYILLTHGHAD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H A ++ + + P+ S +++++ + I + + G ++++ Sbjct: 61 HTSAAEEIRNKYNAPIAISREDYNMMKSRELMYGKLIDEVDIYIEDNQVFEFGNIKLKAL 120 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 P + N+V TGD D T D +G+ + Sbjct: 121 YTPGHTPGG----VSFLGENMVFTGDTLFKRSVGRTDFTGGDFNAIMGSIKNRLMTLPDE 176 Query: 200 NAMREGTCISEKGIKKNIYD 219 + G ++ +Y+ Sbjct: 177 MVVFPGHGSKTSIKEEKMYN 196 >gi|195568456|ref|XP_002102232.1| GD19792 [Drosophila simulans] gi|194198159|gb|EDX11735.1| GD19792 [Drosophila simulans] Length = 768 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 104/335 (31%), Gaps = 56/335 (16%) Query: 68 LMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + F+TH H DH G L P+Y SP L+ + Sbjct: 290 IEGVTHYFLTHFHADHYIG----LTKKFCHPLYVSPTTARLVRTFIK----LDETHIHEI 341 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +DV + ++ NH P + + S I+HTGD++ D +S Sbjct: 342 DVDQTLDVDGVQVTALEANH-CPGALMFFFKLSSGECILHTGDFRA--------SADMES 392 Query: 183 LCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSS 236 L N I L D+T + + +++ KNA +L+ S Sbjct: 393 LPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVELVRAFLEKNAAKRILIVCGSYV 452 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + + + +A++ K+ + + V + L +I Sbjct: 453 IGKEKIWLALAKEFTMKVWTES-------NRSNAVRCLNWPDLDSVLTEDRRGANLHVIA 505 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + S + + + +S+ G Sbjct: 506 MGKISYPSLVDYFTEFEDQYDMLLGIRP-SGWEKNSKPSYG------------------- 545 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + S H +L+R ++++P+ +++ Sbjct: 546 -KRISTIGIEYSEHSSYKELERFVRFLKPKRVIST 579 >gi|194467425|ref|ZP_03073412.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194454461|gb|EDX43358.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 268 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 17/155 (10%) Query: 29 PSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 + I+ID G+S ++ + +D K++ AIF+TH H DH + Sbjct: 24 ETRNHRILIDAGLSGKRIENLMKKIDRSL----------KDVDAIFVTHEHSDHTHGVGV 73 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 L + VYA+ + K D+G IES V+H Sbjct: 74 LARRYGMDVYANEGTWQAMADKV---GKIPLAQKHIIAPNTVKDLGDMDIESFAVSHDAA 130 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + + D + D A D Sbjct: 131 QPQFYQVHHNNKTFCIITDTGYVSDRVAGTIRNAD 165 >gi|124265259|ref|YP_001019263.1| cAMP phosphodiesterase [Methylibium petroleiphilum PM1] gi|124258034|gb|ABM93028.1| cAMP phosphodiesterases, class-II, metallo-beta-lactamase superfamily [Methylibium petroleiphilum PM1] Length = 267 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 65/230 (28%), Gaps = 58/230 (25%) Query: 1 MKNEELVFLPLGGVGEI--GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M + LG G I G + ++ID G L Sbjct: 1 MSRAPVRLQVLGCSGSIASGSRTTAF-----LLDDNVLIDAGTGVGDLAL---------- 45 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLW-----------SFLHVPVYASPFAIGLLEA 107 + I ++H+H DH A+ L + V+ P + L A Sbjct: 46 ----DAMARVDDILVSHSHLDHVLAIPLLADSVMKLRLAQPERGPIRVHGLPETLAALRA 101 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAF---------------SIESVRVNHSIPETMALV 152 ++ I A + + F +E + +H++P Sbjct: 102 HLFNGQLWPDFTSIPSAAYPIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVP-ACGFA 160 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + S G V++GD ++ A+ I L+ ++ Sbjct: 161 VDSEEGWWVYSGDTG----------SNPALWAALKGRRIAHLIIETAFGD 200 >gi|327408312|emb|CCA30123.1| unnamed protein product [Neospora caninum Liverpool] Length = 1183 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 58/414 (14%), Positives = 117/414 (28%), Gaps = 58/414 (14%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHV------PVYAS--PFAIGLLEAKRVYERVSKK 117 + A +TH H DH GAL +L V V AS L Sbjct: 361 HAVDACVVTHFHLDHCGALPTFTEYLDVWSFEQSDVAASAERATALRLREAWREGG---- 416 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + D + + F + ++ ++V+TGD+ D LG Sbjct: 417 ------ASEDALQLTPFY------AGHVLGAAMFELKIGNTSVVYTGDFNTIPDRHLGS- 463 Query: 178 TDKDSLCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 ++ L+ + T A R E+ ++D + G VL+ F+ Sbjct: 464 ------ASLPCLRPDVLISECTYASFVRPSKRTVERDFCAVVHDTLTKG-GKVLIPVFA- 515 Query: 236 SVSRIRSIIDIAEQI------GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 V R + + + E I G +R K + + Sbjct: 516 -VGRAQELCMLLENYWERMHLHFPIYFAGGMTERANVYYRLYVHWSKANGSVDAGAGDEL 574 Query: 290 PRE-----QLIVIATGSQGEPRSALAQLSRGE-MRNVKLAEKDTVIFSSR---AIPGN-- 338 P ++ + P + + G + L +PG Sbjct: 575 PTSAFSFPHILPFQSSLLSAPTPLVLLATPGMLHGGLALKALKAWAGDQANLVLLPGYCV 634 Query: 339 -EVAIGHIKNRLVEQ----GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + + + + + S H ++++ +P+ +V +HG Sbjct: 635 RGTVGAMLIAGQRQIPLDGHATLNVKCRIRYMSFSAHADSLGIQQLILNTQPRSVVLVHG 694 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLI 447 E + + ++ V G+ + + + + V L + Sbjct: 695 EKDGMEKLANVIRRDFNTPVYTPATGQTISIPVLRRQRVVPVYVHLNFLRAARL 748 >gi|166154080|ref|YP_001654198.1| Zn-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|166154955|ref|YP_001653210.1| Zn-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335284|ref|ZP_07223528.1| Zn-dependent hydrolase [Chlamydia trachomatis L2tet1] gi|165930068|emb|CAP03551.1| Zn-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|165930943|emb|CAP06505.1| Zn-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 262 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 5/116 (4%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++ IF+TH H DH L P+ + L F Sbjct: 46 HPEDIQGIFVTHEHSDHIAGLRSFIKTYRTPIICNIETARSLRQLLDLC-----PTFKIF 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G + + +++ V H + + + + + D I + D Sbjct: 101 TTGHRFSLEDLRVQTFNVPHDAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCD 156 >gi|229192471|ref|ZP_04319434.1| Metallo-beta-lactamase [Bacillus cereus ATCC 10876] gi|228591048|gb|EEK48904.1| Metallo-beta-lactamase [Bacillus cereus ATCC 10876] Length = 239 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYVQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAVRDTFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPAD 138 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 HIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 184 >gi|94958251|gb|ABF47257.1| metallo-beta-lactamase family protein [Staphylococcus xylosus] Length = 207 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I++D P +D DL+ + + K L+A+ +TH H DH GAL Sbjct: 16 YFIENDTSVILVD-----PANDS---DLII---KKLNQINKKLVAVLLTHGHFDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ VPV+ L K + I Q + +V F Sbjct: 65 DIIEKYDVPVFMHKSEFDFLTNVTKNGSEKFKQYGLPNVISNAKPQPLEEGDANVEGFHF 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 + P ++ + Sbjct: 125 NVLHTPGHSPGSLTFIFNEFA 145 >gi|224543293|ref|ZP_03683832.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] gi|224523826|gb|EEF92931.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] Length = 203 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 21/150 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G ++ID P D+ + + I + + I +TH H D Sbjct: 13 NCYIVSCGHTC----VIID-----PGDEANHI------MQEIENDHLEVKGILVTHGHFD 57 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL----EAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H GA+++L ++ H VYA+ ++ E V K I D + + + Sbjct: 58 HIGAVNELKAYYHTDVYATKDTKDMMLNWDENLSVMIGGEKYIVEDVQIIDDTIILEGMN 117 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + N + TGD Sbjct: 118 FKVYETPGHAKGSCLYY--YEQENALFTGD 145 >gi|73662520|ref|YP_301301.1| Zn-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495035|dbj|BAE18356.1| putative Zn-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 207 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +++D P D DL+ + + K L AI +THAH DH GAL Sbjct: 16 YFIENETNVLLVD-----PASDS---DLII---KKLNQINKPLSAILLTHAHFDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQA--GDKVDVGAFSI 136 + VPVY L K + + I ++ Q+ + ++ F Sbjct: 65 AIVEKYQVPVYMHKAEFDFLTDTQKNGSEKFKQYGLPQVISSVTPQSLTEGQTNIANFEF 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 + + P ++ V + Sbjct: 125 NVLHMPGHSPGSLTFVFKDFA 145 >gi|167758776|ref|ZP_02430903.1| hypothetical protein CLOSCI_01118 [Clostridium scindens ATCC 35704] gi|167663516|gb|EDS07646.1| hypothetical protein CLOSCI_01118 [Clostridium scindens ATCC 35704] Length = 536 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 66/501 (13%), Positives = 140/501 (27%), Gaps = 108/501 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + L + I+IDCG+ PD + + + Sbjct: 1 MRLSCIGAAHEVTGSCHLLEACGKN----ILIDCGMEQG-----------PD---LYENQ 42 Query: 66 ------KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------- 111 K + I +THAH DH G + L V + L Sbjct: 43 EIPVTAKEIDYILLTHAHIDHSGKIPLLCRQGFKGDVVTTFATSDLCNIMLRDSAHIQES 102 Query: 112 -----ERVSKKIPCISFQA--------------------GDKVDVGAFSIESVRVNHSIP 146 R +K+ +++ + + H + Sbjct: 103 ESEWRNRKAKRSGEETYEPLYTMEDADAAIKLLAPCDYGQKITLCEGIEVRFNDMGH-LL 161 Query: 147 ETMALVIRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + ++ + I V +GD + I+ D + ++ +ST Sbjct: 162 GSASIEVWITEDGISKKVVFSGDVGNTNQPIIR---DPQKVAE-----ADYVVIESTYGD 213 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-RKIVLLGSSL 261 R I + + + V S +V R + ++ +I ++++ Sbjct: 214 RTHGDEVPDYIGEFTKILKETFDKGGNVVIPSFAVGRTQELLYFIREIKEKRLLPQYQGF 273 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNV 320 + V + + + + E + ++ G L ++ E R + Sbjct: 274 EVYVDSPLAIEATNVFNKNVKSC----FDEEAMALVEKGINPLIFPGLKTTITSDESRMI 329 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC----------------- 363 +K VI S+ + H+K+ L + + + Sbjct: 330 NFDDKPKVIISASGMCEAGRIRHHLKHNLWRRECTICFVGYQAVGTLGRKLIEGAQSVKL 389 Query: 364 -------------PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQE 408 +SGH N L + +P ++ +HGE +L Sbjct: 390 FGENITVNARIVDVKGISGHADMNGLLNWLKGFTHKPDRVIVVHGEDTVTDHFAKLVEDT 449 Query: 409 GIACVPPVRNGKMLRLFPDPI 429 +G + L + I Sbjct: 450 IGCPTFAPYSGGCVDLASNEI 470 >gi|301336282|ref|ZP_07224484.1| hypothetical protein CmurM_00560 [Chlamydia muridarum MopnTet14] Length = 262 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 30/116 (25%), Gaps = 5/116 (4%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + I ITH H DH L P+ + L F Sbjct: 46 HPEEIQGILITHEHSDHIAGLRSFIKSYKTPIICNIETARSLRHLLDLC-----PTFNIF 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G + I++ V H + + + I D I + D Sbjct: 101 TTGHSFSLEDLRIQTFNVPHDAVDPVGFIFHCFGIKIGFCTDLGWGTSWITHLLYD 156 >gi|195152475|ref|XP_002017162.1| GL21672 [Drosophila persimilis] gi|194112219|gb|EDW34262.1| GL21672 [Drosophila persimilis] Length = 637 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 102/327 (31%), Gaps = 51/327 (15%) Query: 72 FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+TH H DH G L P++ SP L+ A ++ + Sbjct: 218 FLTHFHADHYIG----LTKKFAFPLFMSPLTARLVRAFIK----IDEMYIHEIDVDQTIL 269 Query: 131 VGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 V I + NH P + S I+HTGD++ + + N Sbjct: 270 VDNIQITGIEANH-CPGALMFFFKMSSGECILHTGDFRASFEMESLPIF-------WNNI 321 Query: 190 GILALMCDSTN-AMREGTCISEKGIKKNIYDIMKNAKGC----VLVTTFSSSVSRIRSII 244 I L D+T + C + + + +Y + K + +L S + + + + Sbjct: 322 DIDLLYLDTTYLSGNYDFCHQTESVDRAVYMVQKFHERYPGKRILYVCGSYVIGKEKIWL 381 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 +AE+ + I + ++ L +I + + Sbjct: 382 ALAEKFSLTVWTEA-------HRRIAIDCLEWPDLQSRLNDDPYQANLHVIGMGKVTYLV 434 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 Q + + +S+ G ++I I+ Sbjct: 435 LAEYFKQFEDQYDMLLAIRP-SGWEKNSKPSYGKRISIIGIE------------------ 475 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+R ++I+P+ +++ Sbjct: 476 --YSEHSSYKELERFVRFIKPRRIIST 500 >gi|91776480|ref|YP_546236.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91710467|gb|ABE50395.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] Length = 254 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G IG S I+ID G L + + Sbjct: 6 LGCSGGIG---QGLRTTSLLVDGDILIDAGTGVGDLTL--------------AQMSTISH 48 Query: 71 IFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +F+THAH DH L L V V+A P I L+A + I Sbjct: 49 VFLTHAHLDHIAFLPLLLDAVLGKREQPVTVHALPETIASLKAHIFNGHIWPDFNQIPTP 108 Query: 125 AGDKVDVGAFSI-----------ESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ ++ NHS+P + ++ S G++ TGD Sbjct: 109 EQPLLQYAPITVGDEAEIAGRRIVALPANHSVP-AVGYLLGSGSGSLAFTGD 159 >gi|283797774|ref|ZP_06346927.1| VicX protein [Clostridium sp. M62/1] gi|291074452|gb|EFE11816.1| VicX protein [Clostridium sp. M62/1] gi|295092013|emb|CBK78120.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Clostridium cf. saccharolyticum K10] Length = 265 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 13/150 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S +++D G+S + + ++ + L + ITH H Sbjct: 12 GNCIYIG----SDHTHLLVDAGISNRRIEQGLNEIGI--------KGSELDGVLITHEHS 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L VPVY++ + ++ + +++ D +G I+ Sbjct: 60 DHVKGLGVLARKYGVPVYSTRETLEEIKGMKSLGDYPEELLRPVVHDVD-FRIGDLDIKP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +++H +A ++ ++ D Sbjct: 119 FKISHDAANPVAYRVQEGRKSVAVATDMGN 148 >gi|91784214|ref|YP_559420.1| putative metallo-beta-lactamase family protein [Burkholderia xenovorans LB400] gi|91688168|gb|ABE31368.1| Putative metallo-beta-lactamase family protein [Burkholderia xenovorans LB400] Length = 257 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG S + + +T + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCGFSAKEVER--------RLTRLGASV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI ITH H DH G+ L +P+Y S + A I Sbjct: 51 EGLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DEADIDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G SI V H E + V+ + + D Sbjct: 105 DEAVAIGDLSILPYTVPHDAREPLQYVLSNGASRLGVLTDVGT 147 >gi|325262049|ref|ZP_08128787.1| metallo-beta-lactamase family protein [Clostridium sp. D5] gi|324033503|gb|EGB94780.1| metallo-beta-lactamase family protein [Clostridium sp. D5] Length = 206 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 26/170 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E+ V G IG N L + +++ ++D + + ++ Sbjct: 1 MKIEKFVI------GIIGTNCYLVQ--NEETKECFLVDPAICPAEL-----------VSH 41 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + L AI +TH H DH + VPVYA LL + V+ Sbjct: 42 IKSQGLALKAILLTHGHFDHIMGIDGFLKEFQVPVYAHEEEKLLLNDPAMNSSVNYGPGY 101 Query: 121 I-----SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G K+ V IE + I P ++ +GD Sbjct: 102 TFSRAEYLKDGQKLTVAGMEIEVLYTPGHTIGGCCYYI--PDEGVLFSGD 149 >gi|302035708|ref|YP_003796030.1| putative RNA-metabolising metallo-beta-lactamase [Candidatus Nitrospira defluvii] gi|300603772|emb|CBK40104.1| putative RNA-metabolising metallo-beta-lactamase [Candidatus Nitrospira defluvii] Length = 465 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 75/471 (15%), Positives = 133/471 (28%), Gaps = 80/471 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 ++ + I++DCG+ F D F+ + +++ A+ ++HAH Sbjct: 10 RSVTGSRHLLEMPGNRILLDCGL-FQGQRQ-EADRQ---NRFLGFDPRSIQAVLLSHAHI 64 Query: 79 DHYGALHDL-WSFLHVPVYASPFAIGLLEAKR----------------VYERVSKKI--- 118 DH GAL L V+ + + L R K+ Sbjct: 65 DHSGALPVLGKHQFRGNVHMTRATVDLAAVMLEDSARLQENDCAYLNKKENRRGKRCLQP 124 Query: 119 ------------PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVG----NIV 161 + + GD + V + V H I + A+ ++ ++ Sbjct: 125 FYESRDARAIIRRFVGARYGDTIKVTPRVTASFHDVGH-ILGSAAIRLKYSARGNSTTVL 183 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN--IYD 219 +GD IL D T L+ +ST R E +K + Sbjct: 184 FSGDLGRSQMPILRDPT--------PPPSCDVLIIESTYGDRLHEEAGEALTQKAQQLVA 235 Query: 220 IMKNAKGCVLVTTFS-----SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 K K ++V F+ V RI+ ++ I + +V V Sbjct: 236 HAKEHKSKIIVPAFALGRTQDLVMRIKRLVAEGRIDPLPIYIDSPLASKVTDVFRKHPEC 295 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPR--------------SALAQLSRGEMRNV 320 ++ F + S G P + S E + S + + R Sbjct: 296 YDEETFRTFTSEGD-PFAARYIRYVSSPEESKRLNEMKGPCVIIASSGMCEGGRVVHHLK 354 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----SGHPYPNDL 376 + + I + + + I V V S H NDL Sbjct: 355 HGIQDEANIIAIVGFQAEHTLGRRLVEGWDVVPIFGIPTPRRAQVVVFNGLSAHADRNDL 414 Query: 377 KRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 + I P QV V E L + + V + + Sbjct: 415 LAYVRAISPAPQQVFVVHGEEKQALSLGAAIQTEHPGMAVVVPAKDSIYEI 465 >gi|78223151|ref|YP_384898.1| Beta-lactamase-like [Geobacter metallireducens GS-15] gi|78194406|gb|ABB32173.1| Beta-lactamase-like protein [Geobacter metallireducens GS-15] Length = 261 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S ++ID G+S + + + I E +L +FI+H H DH + L Sbjct: 22 VESDGTRVLIDAGLSARE--------IVRRLAVIEVEPADLDGLFISHEHVDHVRGVGVL 73 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PV+ S P + F++G I+ + H + Sbjct: 74 ARKYRLPVHVSYPTHH------EVREGFGDAPVVEFESGYSFGFRDLLIDPFPITHDACD 127 Query: 148 TMALVIRSPVGNIVHTGD 165 + I S G + D Sbjct: 128 PVGFTIESKEGKVGIATD 145 >gi|70726372|ref|YP_253286.1| hypothetical protein SH1371 [Staphylococcus haemolyticus JCSC1435] gi|68447096|dbj|BAE04680.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 208 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 28/181 (15%) Query: 26 YGSPSSRKWIMID-CGVSFPKDDLPGVDLVFPD--ITFIMKERKNLMAIFITHAHEDHYG 82 Y + I+ID G PD + + K L AI +THAH DH G Sbjct: 16 YFIENEESVILIDPAG--------------EPDKIFKKLNQINKPLKAILLTHAHFDHIG 61 Query: 83 ALHDLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAGD--KVDVGA 133 AL D+ + VP+Y + L+ AK + + D + ++ Sbjct: 62 ALDDVVNKYEVPLYMNKEEFSFLKDPDKNGSAKFKQYGMPLITSDVKPNHLDEGEYNIEG 121 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 F + P ++ V + + D ++L + + Sbjct: 122 FEFNVLHTPGHSPGSLTYVFEDFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKLFE 179 Query: 194 L 194 L Sbjct: 180 L 180 >gi|312792969|ref|YP_004025892.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180109|gb|ADQ40279.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 198 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 30/189 (15%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATRIESII------VENDLIPKAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRVYERVSKKIPCIS---FQAGD 127 +TH H DH+ L +PVYA +L A + + +I I F+ GD Sbjct: 51 LTHGHFDHFLGCCYLKQRFKLPVYAHRDEKEVLSNPAYNLSYLIGSEIKIICDGYFEDGD 110 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCA 185 + FS++ + P + + NI+ +GD +K + ++D + Sbjct: 111 VFEFADFSLKVLHTPGHTPGSSCFL----YDNILFSGDTLFKDSYGRGDLPLGNQDKVFE 166 Query: 186 IGNEGILAL 194 E +L L Sbjct: 167 SIKEKLLVL 175 >gi|255086367|ref|XP_002509150.1| predicted protein [Micromonas sp. RCC299] gi|226524428|gb|ACO70408.1| predicted protein [Micromonas sp. RCC299] Length = 671 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 117/326 (35%), Gaps = 31/326 (9%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 F+TH H DHY L V+ S L ++ +R + + G Sbjct: 345 RHWFLTHFHADHYRGLTKSTPPPGCLVWCSRPTAELCASRLGIQRDRLRAVDV----GRT 400 Query: 129 VDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + V + NH P + +V P G ++ TGD + G TD L A+ Sbjct: 401 IVVDGVRCTFIDANH-CPGAVMIVFDGIPAGPVLATGDCRY----HPGMKTDPT-LAALA 454 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIM--KNAKGCVLVTTFSSSVSRIRSIID 245 + ++ D+T + + + D + ++ VL + ++ + R + Sbjct: 455 SRRPAVML-DTTYCSPAHVFPPQCEVLAAVRDAVKAESFNPRVLFLFGTYTIGKERVFFE 513 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 A+ +G+K+ + +K + ++ + +D + D++ L+ ++ + + S G Sbjct: 514 AAKALGKKVYVGKQKMKVLDALGSAIDDADRDMITADDQATNLH----VVPMGSTSFGRM 569 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 ++ L V ++ R ++G + Sbjct: 570 KTILRYYKNRYDTIVAFKPTGWTFEAA-------KKHARATKRT-QRGAMIQYSVP---- 617 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++L+ ++++P+ ++ Sbjct: 618 -YSEHSSFDELRAFVKFLKPRAVLPH 642 >gi|238585297|ref|XP_002390824.1| hypothetical protein MPER_09839 [Moniliophthora perniciosa FA553] gi|215454706|gb|EEB91754.1| hypothetical protein MPER_09839 [Moniliophthora perniciosa FA553] Length = 220 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 33/206 (16%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHV-----PVYASPFAIGLLEAKRVYE--------RV 114 + AI ITH H DH AL + + VY + L + Sbjct: 15 VDAILITHFHLDHAAALTYITEKTNFKDGKGKVYMTHPTKALHKFMMQDFLRMSSSSSDA 74 Query: 115 SKKIPCISFQAGDKVDVG---------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ + + + H + +I I++TGD Sbjct: 75 LFSPLDMTMSLSSIIPISAHQVITPCPGVTFTPYHAGH-VLGACMFLIDIYGLRILYTGD 133 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNA 224 + ++D L I L+ +ST ++ EK ++ + + Sbjct: 134 YSREEDRHLVK-------AEIPPIRPDVLIVESTYGVQSLESRPEKELRFTTLVHSIIRR 186 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQI 250 G VL+ F+ + R + ++ I ++ Sbjct: 187 GGHVLLPQFA--LGRAQELLLILDEY 210 >gi|242398194|ref|YP_002993618.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] gi|242264587|gb|ACS89269.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] Length = 260 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 21/212 (9%) Query: 49 PGVDLVF---PD----ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFA 101 P ++ + PD ++++ + +N+ FITH H DH G L +L F V Y+ Sbjct: 52 PQINALIDPSPDLYYHMSYLNERIENV---FITHPHFDHIGGLPELQVFKKVRFYSHKKI 108 Query: 102 IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE-TMALVIRSPVGNI 160 + L + + ++ +S + D G F ++ V H + ++ I Sbjct: 109 LDLAKHLQETFLGIREWEYVSLEFNRWYDFGKFKVKQFPVVHQPGDVAGGFILEVKGKRI 168 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V TGD + + + L I G L+ + T+ + + G++ I Sbjct: 169 VITGDTG------PEILRNHELLEEI--RGADLLVSEMTH--KYSIPKTHLGVEDAIKFA 218 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 K L S S + + + G Sbjct: 219 QKVEANKTLFVHISHSNYTQEELEEKVGENGM 250 >gi|256075515|ref|XP_002574064.1| DNA cross-link repair protein pso2/snm1 [Schistosoma mansoni] gi|238659258|emb|CAZ30297.1| DNA cross-link repair protein pso2/snm1, putative [Schistosoma mansoni] Length = 431 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 114/340 (33%), Gaps = 32/340 (9%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DH+ +H +Y S LL + + + + Sbjct: 86 FLSHFHFDHFRGIH---KNFKGDIYCSEVTKNLLR-----DAYGSGLVINVLEIEKSTKI 137 Query: 132 GAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDDAILG------DVTDKDSL 183 G + ++ NH P ++ + P +HTGD++ + ++D + Sbjct: 138 GNVEVTALDANH-CPGSLMFLFYVPSKQRTYLHTGDFRYTPSMLTHPSILTNYISDNSAS 196 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRI 240 + I ++ D+T + ++ + ++ ++ +LV S+ + Sbjct: 197 KKLPR--IHSIFLDTTYCSSQYDFPNQVDVIHGALEVTRDYLIKDPTILVVCGMYSIGKE 254 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI--- 297 R + +A ++ K+ L ++ R++ +A G +L + ++ + Sbjct: 255 RFTLGLASELNLKV-WLPNNQNRLIKLAAQGGCSVCKELLQYVVDSSHKAQLHVLPMQQL 313 Query: 298 -ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 G + +L N K I R + + ++ + + Sbjct: 314 NVAGLVQYQKKLGNRLPIDPFHNSPTFPKLRSILGWRPTGWSHRQSNNAQSSIRPPPNGI 373 Query: 357 IAEDAECPVH-----VSGHPYPNDLKRMYQWIRPQVLVAI 391 + E + +H S H +LK+ + P + Sbjct: 374 VLEQKKGDIHIYGAPYSEHSSFLELKQFITRLHPVQVQPT 413 >gi|307706666|ref|ZP_07643472.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307709235|ref|ZP_07645694.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|322376759|ref|ZP_08051252.1| VicX protein [Streptococcus sp. M334] gi|307617910|gb|EFN97071.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307620181|gb|EFN99298.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|321282566|gb|EFX59573.1| VicX protein [Streptococcus sp. M334] Length = 269 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K +++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKLLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|291532340|emb|CBL05453.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Megamonas hypermegale ART12/1] Length = 248 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 14/138 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L I+ID G+S K + + ++L AIFITH H Sbjct: 12 GNCTLI----YDDNNAILIDMGISTRKLKQ--------ALAQLHLNIEDLDAIFITHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +VP+Y+ + + + + ++ K + +D+G +I+ Sbjct: 60 DHIRGLKTLTKNYNVPIYSKTATLKQIAITQKFTDINLK--NCQALTTNNIDIGNLAIKI 117 Query: 139 VRVNHSIPETMALVIRSP 156 ++H + + I Sbjct: 118 FNISHDAIDPVGYTISKY 135 >gi|119715552|ref|YP_922517.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614] gi|119536213|gb|ABL80830.1| beta-lactamase domain protein [Nocardioides sp. JS614] Length = 256 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 6 LVFLPLGGVG-----EIGMNMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDIT 59 + +G G E + L S R W +++D G + G F D Sbjct: 1 MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLG-----NGSLGALHRFADP- 54 Query: 60 FIMKERKNLMAIFITHAHEDHYGAL--HDLWSFL-------HVPVYASPFAIGLLEAKRV 110 + A+ ++H H DH L + + +PV+ R Sbjct: 55 ------LAIDAVLLSHLHADHCLDLCGYYVLRKYHPLGPQPRIPVWGPEGTAD--RMARA 106 Query: 111 YERVSKKIPCISFQAGDKV---DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 Y+ S F+ + +G F +E V VNH +P L + + + +TGD Sbjct: 107 YDLPSDPGMHHEFEFHEWHGAEQIGPFRVEPVAVNHPVP-AYGLRVTADGMTLAYTGD 163 >gi|268680078|ref|YP_003304509.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268618109|gb|ACZ12474.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 464 Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 70/480 (14%), Positives = 131/480 (27%), Gaps = 100/480 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + L S I+IDCG+ + L + + + + Sbjct: 8 GGASMVTGSCHLVEIHSIK----ILIDCGMIQGE-------LWQENYNPFGFNPREIDYL 56 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------------- 109 +THAH DH G + L + A+ + + Sbjct: 57 ILTHAHTDHIGRVPKLVKEGFRGQIIATEATLDIAYIMLLDSAVLLMEEYETQLRKALRR 116 Query: 110 -VYERVSKKIPCISF------------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 V + + Q + + + F S I + + + Sbjct: 117 GEEASVQEPLYTKEHVENVFAQKIRYAQYEETIKIAPFLTMSFHDAGHIIGSAFIQMHFR 176 Query: 157 VGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK- 211 ++ +GD + +L ++T L +ST RE + E Sbjct: 177 EDEVEKSVIFSGDLGSKNRLLLNELT--------PVLEAQTLFIESTYGDREHRALQESI 228 Query: 212 -GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR------------------ 252 K I +K V+ + I ++ G Sbjct: 229 DEFKTVITQTLKEGGNIVIPSFALERTQEILWLLRQMHDEGLLGNCHVFLDSPLAIEATK 288 Query: 253 KIVLLGSSLKRVVSVAIDVG-------IIKKDQLFLSDESFGLYPREQLIVIATG--SQG 303 + + V + + +G ++ Q ++ +I+ +G + G Sbjct: 289 IYQKYPMHMNQTVGLHVSLGDDPFSFPQLRHTQRKKDSMEINDVEKKAIIIAGSGMCTGG 348 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 L Q V R I E I I ++ ++ + Sbjct: 349 RVLHHLKQRIWNPKNAVVFVGFQVKGTLGREIVDGESFI-RIYGEDIKVRAKIYTING-- 405 Query: 364 PVHVSGHPYPNDLKRMYQWIRP----QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNG 419 S H +D+ QWI+P + IHGEP L K + V V+ Sbjct: 406 ---FSAHADRDDM---LQWIKPMEGLNHIYLIHGEPDKLELFKTYLKENTGLKVHIVKRN 459 >gi|255349133|ref|ZP_05381140.1| Zn-dependent hydrolase [Chlamydia trachomatis 70] gi|255503670|ref|ZP_05382060.1| Zn-dependent hydrolase [Chlamydia trachomatis 70s] gi|255507349|ref|ZP_05382988.1| Zn-dependent hydrolase [Chlamydia trachomatis D(s)2923] gi|289525782|emb|CBJ15263.1| Zn-dependent hydrolase [Chlamydia trachomatis Sweden2] gi|296435357|gb|ADH17535.1| Zn-dependent hydrolase [Chlamydia trachomatis E/150] gi|296439074|gb|ADH21227.1| Zn-dependent hydrolase [Chlamydia trachomatis E/11023] Length = 262 Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 5/116 (4%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++ IF+TH H DH L P+ + L F Sbjct: 46 HPEDIQGIFVTHEHSDHIAGLRSFIKTYRTPIICNIETARSLRQLLDLC-----PTFKIF 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G + + +++ V H + + + + + D I + D Sbjct: 101 TTGYRFSLEDLRVQTFNVPHDAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCD 156 >gi|218960612|ref|YP_001740387.1| metallo-beta-lactamase family protein [Candidatus Cloacamonas acidaminovorans] gi|167729269|emb|CAO80180.1| metallo-beta-lactamase family protein [Candidatus Cloacamonas acidaminovorans] Length = 261 Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 16/136 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L + +++D G+ + + + ++ ++ + I ++H H Sbjct: 13 GNCVLI----QTENTALLLDAGI-----SMHRI--MECLESYHIESA-KINGILVSHEHS 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + + L +PVY + + + + + F G+ +G IE Sbjct: 61 DHIKGVGAISRKLKIPVYINRPTL----SSCAERLGDVQDRIVLFNTGNSFTIGDIIIEP 116 Query: 139 VRVNHSIPETMALVIR 154 H E+ V Sbjct: 117 FVSTHDAAESCNFVFY 132 >gi|253573900|ref|ZP_04851242.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846377|gb|EES74383.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 268 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 75/236 (31%), Gaps = 26/236 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L G + +MID G S + + ++ ++L I +TH H Sbjct: 14 GNATLVANGEVT----LMIDAGFSAKRIEELMMERGV--------SGQDLTGILVTHEHS 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L + ++PVYA+ +E G+ D G+ +ES Sbjct: 62 DHIKGLGAVARKYNLPVYANEKTWAAMEKAI---GNLADDQRCILGTGETRDFGSLRVES 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 ++H E + + D + D D L A + Sbjct: 119 FAISHDAAEPVGYNFYDGKEKLSVCTDLGYASDKVKEAIYDADVLVLEANHD-------I 171 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 + R I + + + + +A G ++ + + R + ++ + Sbjct: 172 EMLRMGRYPWNIKRRILGD-LGHLSNDATGELMSEILNGRLKRT-YLAHLSREHNM 225 >gi|227512249|ref|ZP_03942298.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227084527|gb|EEI19839.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] Length = 251 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 43/173 (24%) Query: 11 LGG--VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK-- 66 LGG G + L G+ +IDCG + + + + Sbjct: 14 LGGYPANGNGTSSYLLESGNFH----FLIDCGSA--------------ALLSLEEILDPL 55 Query: 67 NLMAIFITHAHEDH---YGALHDLW----SFLH---VPVYASPFAIGLLEAKRVYERV-- 114 L A+ +TH H DH G L W +P+Y K ++ + Sbjct: 56 KLDALILTHYHHDHTADVGVLQYYWQLHEKRYDQKCLPIYGHTL------DKINFDGLSW 109 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGD 165 +++ ++DVG FSI +++H +P L I + T D Sbjct: 110 PDSTKGVAYDPEKQLDVGPFSITFFKMHHPVP-AFGLRITEKATGKVLAFTAD 161 >gi|323142305|ref|ZP_08077137.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413189|gb|EFY04076.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] Length = 208 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 22/146 (15%) Query: 16 EIGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E GM N + + + ++ D P D P + + I + + ++AI Sbjct: 7 EAGMLATNCYFA--VNEAIGEGVIFD-----PGGDCPTI------LRMIEQAKAKVVAIV 53 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIPCISFQAG 126 +TH H DH GAL +L PVY L + + E + + G Sbjct: 54 LTHGHSDHIGALAELRKATGAPVYIGEDDADCLTQPNRNLSFFIGEELKNEPADHLVHDG 113 Query: 127 DKVDVGAFSIESVRVNHSIPETMALV 152 D +++ E+ Sbjct: 114 DVLELAGMKFEAFATPGHTKGGFCYY 139 >gi|15605471|ref|NP_220257.1| Zn-dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76789478|ref|YP_328564.1| Zn-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|237803168|ref|YP_002888362.1| Zn-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|237805089|ref|YP_002889243.1| Zn-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311569|ref|ZP_05354139.1| Zn-dependent hydrolase [Chlamydia trachomatis 6276] gi|255317870|ref|ZP_05359116.1| Zn-dependent hydrolase [Chlamydia trachomatis 6276s] gi|3329196|gb|AAC68333.1| metal dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76168008|gb|AAX51016.1| Zn-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|231273389|emb|CAX10304.1| Zn-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274402|emb|CAX11197.1| Zn-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|296436284|gb|ADH18458.1| Zn-dependent hydrolase [Chlamydia trachomatis G/9768] gi|296437213|gb|ADH19383.1| Zn-dependent hydrolase [Chlamydia trachomatis G/11222] gi|296438144|gb|ADH20305.1| Zn-dependent hydrolase [Chlamydia trachomatis G/11074] gi|297140645|gb|ADH97403.1| Zn-dependent hydrolase [Chlamydia trachomatis G/9301] gi|297748869|gb|ADI51415.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Chlamydia trachomatis D-EC] gi|297749749|gb|ADI52427.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Chlamydia trachomatis D-LC] Length = 262 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 5/116 (4%) Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +++ IF+TH H DH L P+ + L F Sbjct: 46 HPEDIQGIFVTHEHSDHIAGLRSFIKTYRTPIICNIETARSLRQLLDLC-----PTFKIF 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 G + + +++ V H + + + + + D I + D Sbjct: 101 TTGHRFSLEDLRVQTFNVPHDAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCD 156 >gi|303231362|ref|ZP_07318096.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302513958|gb|EFL55966.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 17/158 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + I+ D G+S + + G+ + D++ + IFI+H H Sbjct: 18 GNCTVI----KKGNSVILHDVGIS-CRRIVNGLKELHIDMS-------QVEGIFISHEHT 65 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY ++ K + K + +++G ++E Sbjct: 66 DHIAGLQQLLKRFDIPVYTKQGTWREIQVKL----IVPKHQLVELT-KGSLELGNLTVEP 120 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 V+H + + + + S D + D IL Sbjct: 121 FSVSHDAADPIGINVFSGKDKATVVTDTGVITDDILHR 158 >gi|15901087|ref|NP_345691.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15903148|ref|NP_358698.1| metal-dependent hydrolase [Streptococcus pneumoniae R6] gi|111657845|ref|ZP_01408560.1| hypothetical protein SpneT_02000968 [Streptococcus pneumoniae TIGR4] gi|116516804|ref|YP_816554.1| vicX protein [Streptococcus pneumoniae D39] gi|148985120|ref|ZP_01818359.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|148989247|ref|ZP_01820627.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|148993835|ref|ZP_01823237.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|149002592|ref|ZP_01827524.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|149007117|ref|ZP_01830786.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|149012276|ref|ZP_01833345.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|149019217|ref|ZP_01834579.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168484879|ref|ZP_02709824.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|168486547|ref|ZP_02711055.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|168489053|ref|ZP_02713252.1| VicX protein [Streptococcus pneumoniae SP195] gi|168493147|ref|ZP_02717290.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|168577196|ref|ZP_02723005.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|169832897|ref|YP_001694656.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|182684047|ref|YP_001835794.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|194397665|ref|YP_002037826.1| VicX protein [Streptococcus pneumoniae G54] gi|221231920|ref|YP_002511072.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225854691|ref|YP_002736203.1| VicX protein [Streptococcus pneumoniae JJA] gi|225859006|ref|YP_002740516.1| VicX protein [Streptococcus pneumoniae 70585] gi|225860941|ref|YP_002742450.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649927|ref|ZP_04524179.1| VicX protein [Streptococcus pneumoniae CCRI 1974] gi|237822524|ref|ZP_04598369.1| VicX protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230884|ref|ZP_06964565.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254365|ref|ZP_06977951.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502779|ref|YP_003724719.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|303254278|ref|ZP_07340387.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|303258860|ref|ZP_07344839.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|303261544|ref|ZP_07347491.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|303264214|ref|ZP_07350134.1| vicX protein [Streptococcus pneumoniae BS397] gi|303266155|ref|ZP_07352048.1| vicX protein [Streptococcus pneumoniae BS457] gi|303268118|ref|ZP_07353918.1| vicX protein [Streptococcus pneumoniae BS458] gi|307067874|ref|YP_003876840.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|307127187|ref|YP_003879218.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|14193096|gb|AAK55819.1|AF219111_3 MicC [Streptococcus pneumoniae] gi|6689278|emb|CAB65440.1| VicX protein [Streptococcus pneumoniae] gi|14972706|gb|AAK75331.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15458730|gb|AAK99908.1| VicX protein [Streptococcus pneumoniae R6] gi|116077380|gb|ABJ55100.1| vicX protein [Streptococcus pneumoniae D39] gi|147759203|gb|EDK66196.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|147761421|gb|EDK68387.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|147763602|gb|EDK70537.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|147922565|gb|EDK73683.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|147925225|gb|EDK76304.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|147927660|gb|EDK78685.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|147931087|gb|EDK82066.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168995399|gb|ACA36011.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|172041983|gb|EDT50029.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|182629381|gb|ACB90329.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|183570428|gb|EDT90956.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|183572535|gb|EDT93063.1| VicX protein [Streptococcus pneumoniae SP195] gi|183576568|gb|EDT97096.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|183577200|gb|EDT97728.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|194357332|gb|ACF55780.1| VicX protein [Streptococcus pneumoniae G54] gi|220674380|emb|CAR68930.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225720567|gb|ACO16421.1| VicX protein [Streptococcus pneumoniae 70585] gi|225723315|gb|ACO19168.1| VicX protein [Streptococcus pneumoniae JJA] gi|225726680|gb|ACO22531.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238374|gb|ADI69505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|301794308|emb|CBW36733.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|301800146|emb|CBW32751.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] gi|301801919|emb|CBW34643.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] gi|302598772|gb|EFL65809.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|302637124|gb|EFL67612.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|302639803|gb|EFL70259.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|302642335|gb|EFL72682.1| vicX protein [Streptococcus pneumoniae BS458] gi|302644325|gb|EFL74579.1| vicX protein [Streptococcus pneumoniae BS457] gi|302646026|gb|EFL76253.1| vicX protein [Streptococcus pneumoniae BS397] gi|306409411|gb|ADM84838.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|306484249|gb|ADM91118.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|327389461|gb|EGE87806.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA04375] gi|332073563|gb|EGI84042.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17570] gi|332074556|gb|EGI85030.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17545] gi|332074835|gb|EGI85307.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41301] gi|332200672|gb|EGJ14744.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41317] gi|332201688|gb|EGJ15758.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA47368] gi|332203073|gb|EGJ17141.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA47901] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + +S+K +++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETSKKKLLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|257462674|ref|ZP_05627083.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|317060322|ref|ZP_07924807.1| Zn-dependent hydrolase [Fusobacterium sp. D12] gi|313685998|gb|EFS22833.1| Zn-dependent hydrolase [Fusobacterium sp. D12] Length = 259 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 18/149 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G N + I+ID G S + + I K Sbjct: 1 MKIAMLGSGS--GGNASYVEENGYG----ILIDAGFS--------CKKIEERLASIGKAA 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +N+ A+ ITH H DH L +P+Y SP ++ + K I Sbjct: 47 ENVKALLITHEHTDHISGAGVLARKYDIPIYISPESLEACKQKL----GKIAENQIHCIQ 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIR 154 D +++ V H T+ I Sbjct: 103 KDFFLNENIYVKAFDVMHDAVRTLGFHIE 131 >gi|156743739|ref|YP_001433868.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235067|gb|ABU59850.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 18/147 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ L G +++DCG+ + + P +T I L AI +TH H Sbjct: 14 GNVLLVRTG----DAALLVDCGL--------PLRTIEPALTRIGIHPAQLSAILLTHEHG 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L VP+ A+ + +E +P G + F + S Sbjct: 62 DHVLSAGALARRYGVPIIANQPTLAAIEQDLAG------VPFQELATGAATMIADFGVRS 115 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 V H E + I + + D Sbjct: 116 FPVPHDAAEPVGYTISAGGWCVGIATD 142 >gi|320333210|ref|YP_004169921.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319754499|gb|ADV66256.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 313 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 46/142 (32%), Gaps = 26/142 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN------LMAIFI 73 N L G P W++ID G+ + I + + AI + Sbjct: 30 NAYLIG---PPGGDWVLIDAGM-------------VLNTRLIRQAARQHHDERPPSAIVL 73 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH G+LH L VPVYA P + L + Y + + G Sbjct: 74 THGHLDHVGSLHALLRIWDVPVYAHPLELPYLTGQHPYPFPDPTVGGVMSALSPAFVPGP 133 Query: 134 FSIESV----RVNHSIPETMAL 151 F + S+P Sbjct: 134 FDFRPNVRTLPADGSVPHLPGW 155 >gi|257453015|ref|ZP_05618314.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|257467425|ref|ZP_05631736.1| metal dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|315918549|ref|ZP_07914789.1| Zn-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|317059555|ref|ZP_07924040.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313685231|gb|EFS22066.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313692424|gb|EFS29259.1| Zn-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 259 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 16/137 (11%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + I+ID G S + + I K +N+ A+ ITH H Sbjct: 11 GGNASYVEENGYG----ILIDAGFS--------CKKIEERLASIGKSAENIKALLITHEH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L ++P+Y SP ++ + K I D ++ Sbjct: 59 TDHISGAGILARKYNLPIYISPESLEVCRQKL----GKIAEDQIHCIQKDFFLNENIYVK 114 Query: 138 SVRVNHSIPETMALVIR 154 V H T+ I Sbjct: 115 PFDVMHDAVRTLGFHIE 131 >gi|74316113|ref|YP_313853.1| metallo-beta-lactamase superfamily protein [Thiobacillus denitrificans ATCC 25259] gi|74055608|gb|AAZ96048.1| metallo-beta-lactamase superfamily protein [Thiobacillus denitrificans ATCC 25259] Length = 474 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 42/137 (30%), Gaps = 30/137 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-------PGVDLVFPDI 58 + LG E+ + L + ++DCG+ + G D D Sbjct: 1 MKLTFLGAAHEVTGSSYLVE----ADGVRFLVDCGMFQGGREAREKNRRPFGFDPAALDF 56 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK 117 + +THAH DH G L L + PV+A+ LL Sbjct: 57 ------------VILTHAHIDHSGLLPRLVADGYRGPVHATRATCDLLAVML------PD 98 Query: 118 IPCISFQAGDKVDVGAF 134 I + + V F Sbjct: 99 SAHIQEKEAEYARVDRF 115 >gi|170694773|ref|ZP_02885924.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] gi|170140404|gb|EDT08581.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] Length = 257 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 55/163 (33%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S + +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGVTTTRVLLDCGFSAKEVER--------RLNRLGSSA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L A+ ITH H DH G+ L +P+Y S + A + Sbjct: 51 EALDAVLITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DEADVDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + + D Sbjct: 105 DEAVAIGDLSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGT 147 >gi|168491146|ref|ZP_02715289.1| VicX protein [Streptococcus pneumoniae CDC0288-04] gi|183574335|gb|EDT94863.1| VicX protein [Streptococcus pneumoniae CDC0288-04] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + +S+K +++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETSKKKLLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|282850561|ref|ZP_06259940.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] gi|282580054|gb|EFB85458.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] Length = 268 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 17/165 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + I+ D G+S + + + + + IF++H H Sbjct: 18 GNCTVI----KKGNSVILHDVGIS--------CRRIVNRLKELQIDMAQVEGIFVSHEHS 65 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY ++ K + K I + +G+ +E Sbjct: 66 DHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKNRLIELT-KGSLTLGSLIVEP 120 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V+H + + + + + D + D IL + D L Sbjct: 121 FSVSHDAADPIGINVFAGNDKATIVTDTGVISDDILRRIDDTTLL 165 >gi|52079508|ref|YP_078299.1| hydrolase [Bacillus licheniformis ATCC 14580] gi|52784873|ref|YP_090702.1| YhfI [Bacillus licheniformis ATCC 14580] gi|52002719|gb|AAU22661.1| putative hydrolase. conserved hypothetical protein [Bacillus licheniformis ATCC 14580] gi|52347375|gb|AAU40009.1| YhfI [Bacillus licheniformis ATCC 14580] Length = 244 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 80/236 (33%), Gaps = 42/236 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S ++IDCG + L + L P + L A+ ++H H DH + Sbjct: 21 GYLFQSGDYSVLIDCGSAV----LSKLQLFLP--------VEELDAVILSHYHHDHIADV 68 Query: 85 H----------DLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L P+Y PF E + +++ + +G Sbjct: 69 GPLQFAKLVGSFLGKGADALPIYGHPFD----EEQFSKLTYKTHTAGLAYDPTQPLAIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 F+ ++ H + + A+ + V ++V+T D + I +EG Sbjct: 125 FTFTFLKTVHPV-DCFAMRVTDGVHSVVYTADSSFQEAFIPF------------SEGADL 171 Query: 194 LMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ + A ++G + I A L+ T + +I+ A+ Sbjct: 172 LISECNFYADQDGRSAGHMNSLEA-GRIAAEAGAGQLLLTHLPHFGEHQKLIEEAQ 226 >gi|289168017|ref|YP_003446286.1| protein VicX [Streptococcus mitis B6] gi|288907584|emb|CBJ22421.1| conserved protein VicX [Streptococcus mitis B6] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + +K +++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETPKKKLLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVILTDTGYVSDRMAGIVENAD 166 >gi|5672631|dbj|BAA82668.1| lactamase_B [Streptomyces griseus] Length = 79 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 4/82 (4%) Query: 474 DNHYNIFGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSA 533 + I G P I G D + + + + Q + L++ + Sbjct: 2 SSSGKIVGGPHIQARGSGIDDNAFAGVTPKIQE----ALDKSAQDGVMEPHQLQQMVRRT 57 Query: 534 LRSLLKKVWGKKPLVTVFINKI 555 + + + ++P++ + ++ Sbjct: 58 VGKWVSDTYRRRPMILPVVVEV 79 >gi|307546168|ref|YP_003898647.1| beta-lactamase-like protein [Halomonas elongata DSM 2581] gi|307218192|emb|CBV43462.1| beta-lactamase-like protein [Halomonas elongata DSM 2581] Length = 263 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N L G + +++DCG + + + + + Sbjct: 11 LRFASLG-SGSKG-NATLVSDGETT----LLVDCGFTLKETEQ--------RLGRLGLHP 56 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L A+ +TH H DH + L VPVY +P + R+ + Sbjct: 57 RQLDALLVTHEHGDHLRGVGPLARKHGVPVYLTPGT-------WLAGRIGELPHRHWITP 109 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 V I+ V V H E + + + + D Sbjct: 110 QSPFRVKGIDIDPVTVPHDAREPVQFRLSAAGRRLGLLTD 149 >gi|238021583|ref|ZP_04602009.1| hypothetical protein GCWU000324_01483 [Kingella oralis ATCC 51147] gi|237866197|gb|EEP67239.1| hypothetical protein GCWU000324_01483 [Kingella oralis ATCC 51147] Length = 214 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N +L +R +++D G + ++ K L AI++TH H D Sbjct: 16 NCSLL--WDDETRDAVLVDVG---GDAEHLLAEV--------NKRSLKLNAIWLTHGHLD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-------KIPCISFQAGDKVDVG 132 H G + L +VPV L S P GD + VG Sbjct: 63 HAGGVPMLLERQNVPVIGPHPDDQFLLDALPETTASYGFPVCPVFAPTRWLHDGDTLSVG 122 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 F+ + + + P +V ++ GD + TD Sbjct: 123 QFTFQVLHIPGHTPG--QVVFYCAAAKLLLAGDVLFYES---IGRTDFPR 167 >gi|148264120|ref|YP_001230826.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146397620|gb|ABQ26253.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 256 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 25/175 (14%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ID G+S + + + I + + A+ I+H H DH L Sbjct: 17 IETGGTKLLIDAGLSAVE--------ILRRLNAIGVDGGEIDAVLISHEHTDHIRGAGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PV S + ER KK + F++G SI+ + H + Sbjct: 69 ARKFKMPVLLSYPT------YKEAERCFKKTEVVEFESGYAFCYKDISIDPFPITHDACD 122 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 + VI+S G + D + L +G L+ +S + Sbjct: 123 PVGFVIKSNEGTVGIATDLGIA-----------TRLVKDKLQGCKVLILESNHDE 166 >gi|328958002|ref|YP_004375388.1| putative metal-binding hydrolase [Carnobacterium sp. 17-4] gi|328674326|gb|AEB30372.1| putative metal-binding hydrolase [Carnobacterium sp. 17-4] Length = 207 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 21/148 (14%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G IG N + K +++D P D+ + V + + + +A+ +T Sbjct: 10 GMIGENCYVI----YQEGKALIVD-----PGDEFVKIKKV------LDELKVTPVAVLLT 54 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIG-----LLEAKRVY-ERVSKKIPCISFQAGDK 128 H H DH GAL ++ +PVY S +L ++ + F+ Sbjct: 55 HTHYDHIGALEEVRKTYSIPVYVSNLEQAWLGNPILNLSIHSGHPITAEPAENEFELLKT 114 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSP 156 D+ F + V P ++ + Sbjct: 115 YDIEGFEFKVVPTPGHSPGGVSFIFADF 142 >gi|281422702|ref|ZP_06253701.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] gi|281403181|gb|EFB33861.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] Length = 295 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N Y + I+ID GV G+ ++ Sbjct: 30 LKFISFG-SGSSG-NC----YYLYTDTDSILIDVGV--------GIRILKKHFHNYGLRF 75 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ + ITH H DH ++ L + H+PVY + +E + + + Sbjct: 76 EDVHHVLITHDHADHVKSVGSLSTDYHLPVYTTRKVHQGIERNYCVRKKIEPNHARVIEK 135 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 +G F I V H + + + N D Sbjct: 136 NVIFTLGEFKITPFGVPHDSTDNVGYFVECGGVNFCLITDVG 177 >gi|323526583|ref|YP_004228736.1| beta-lactamase domain-containing protein [Burkholderia sp. CCGE1001] gi|323383585|gb|ADX55676.1| beta-lactamase domain protein [Burkholderia sp. CCGE1001] Length = 257 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCGFSAKEVER--------RLARLGSSA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI ITH H DH G+ L +P+Y S + A + Sbjct: 51 EGLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DDADVDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + + D Sbjct: 105 DEAVAIGDLSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGT 147 >gi|182412378|ref|YP_001817444.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177839592|gb|ACB73844.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 464 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 19/105 (18%) Query: 6 LVFLPLGGVG-EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----FPDITF 60 + LG G E+ + L +SR I++DCG+ F P D + PD Sbjct: 1 MRITLLGAAGGEVTGSSYLVE----TSRAKILVDCGL-F--QGGPQADALNRAAMPDA-- 51 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL 104 + L A+ +THAH DH G L L PV+A+P + + Sbjct: 52 ----CRALDAVVLTHAHLDHTGRLPLLTRAGFAGPVFATPATVDM 92 >gi|15834736|ref|NP_296495.1| hypothetical protein TC0111 [Chlamydia muridarum Nigg] gi|270284903|ref|ZP_06194297.1| hypothetical protein CmurN_00565 [Chlamydia muridarum Nigg] gi|270288931|ref|ZP_06195233.1| hypothetical protein CmurW_00585 [Chlamydia muridarum Weiss] gi|7190146|gb|AAF38990.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 262 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 47/165 (28%), Gaps = 25/165 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV----FPDITFIMKERKNLMAIFIT 74 N A G + I++D G+S VD + P +++ I IT Sbjct: 13 GNCAYLG----TEACKILVDLGIS----KQAVVDALHSMDIP--------PEDIQGILIT 56 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L P+ + L F G + Sbjct: 57 HEHSDHIAGLRSFIKTYRTPIICNIETARSLRQLLDLC-----PTFKIFTTGHNFSMEDL 111 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I++ V H + + + + + D I + D Sbjct: 112 RIQTFNVPHDAVDPVGFIFQYSGVKLGFCTDLGWGTSWITHLLYD 156 >gi|115526141|ref|YP_783052.1| beta-lactamase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520088|gb|ABJ08072.1| beta-lactamase domain protein [Rhodopseudomonas palustris BisA53] Length = 533 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 10/103 (9%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + L+ +++ ++DCG+ + + + A+ Sbjct: 9 GATRTVTGSCYLF----KTTKGSFLVDCGL-YQGPKTLKA----LNYGAFPFRAAAIDAV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 +THAH DH G L L P+ A+ + L Sbjct: 60 LLTHAHIDHSGLLPKLVRDGFDGPIIATRGTLDLCSYMLPDAG 102 >gi|311030841|ref|ZP_07708931.1| Zn-dependent hydrolase [Bacillus sp. m3-13] Length = 210 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 35/163 (21%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK ++L PLG + N L ++ ++ D G + + ++ Sbjct: 1 MKWKQL---PLGPLQ---TNAYLL---INERKECLIFDPG---SEGEAFN--------SY 40 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + +AI +THAH DH GA+ + VPVY + K + Sbjct: 41 LEENALKPLAILLTHAHFDHIGAVDAVRKHWDVPVY--------VHKKEKSWLGDPSLNG 92 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 +G I + +H I LVI + I+ T Sbjct: 93 -----SQFFQLGP--ITANPADHLIISEEKLVISNFELEILFT 128 >gi|197334722|ref|YP_002156054.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio fischeri MJ11] gi|197316212|gb|ACH65659.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio fischeri MJ11] Length = 330 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 41/223 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGV--DLVFPDIT------F 60 GG+ + N+ + S + ++M+D G + G D++ PD + + Sbjct: 34 GGIQD--GNLTAFLIKSEADSNFVMLDAGSVVNGLIVSEQKGAFKDIIVPDSSPYTKVGY 91 Query: 61 IMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFA-IGLLEAKRV----- 110 ++ + + FI+HAH DH L D P+Y L++ Sbjct: 92 LL--KDRIKGYFISHAHLDHVAGLIISSPDDSKK---PIYGLAATNKDLMKNYFNWSAWP 146 Query: 111 ------YERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV- 161 K + Q + S+ + ++HS ++ +++ G++ Sbjct: 147 NFGNKGEGFKLSKYNYVDLQPGAWSSIAETTMSVMLLPLSHSGGQSTVFILKDSEGDVFA 206 Query: 162 HTGDWKLDD----DAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + GD D+ A+ + S G + + TN Sbjct: 207 YFGDTGPDEVEKSSAMKTAWSALASFVKQGKLKGIIIEVSFTN 249 >gi|312876435|ref|ZP_07736419.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796793|gb|EFR13138.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 198 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 30/189 (15%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G R+ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KREVVIID-----PGDDATRIESII------VENDLIPKAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRVYERVSKKIPCIS---FQAGD 127 +TH H DH+ L +PVYA +L A + + +I F+ GD Sbjct: 51 LTHGHFDHFLGCCYLKQRFKLPVYAHRDEKEVLSNPAYNLSYLIGSEIKITCDGYFEDGD 110 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCA 185 + FS++ + P + + NI+ +GD +K + ++D + Sbjct: 111 IFEFADFSLKVLHTPGHTPGSSCFL----YNNILFSGDTLFKDSYGRGDLPLGNQDKVFE 166 Query: 186 IGNEGILAL 194 E +L L Sbjct: 167 SIKEKLLVL 175 >gi|283797888|ref|ZP_06347041.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|291074577|gb|EFE11941.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|295116118|emb|CBL36965.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [butyrate-producing bacterium SM4/1] Length = 535 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 64/503 (12%), Positives = 143/503 (28%), Gaps = 103/503 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDDLPGVDLVFPDITF 60 + +G E+ + + I+IDCG+ + +LP +++ Sbjct: 1 MRLTFIGADHEVTGSCHYLEACGLN----ILIDCGMEQGSNKYQNQELP--------VSY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + +TH+H DH G L +++ + AS L ++ Sbjct: 49 -----ADIDYVLVTHSHIDHVGMLPFIFARGFSGQIMASRATCDLCNIMLKDCAHIQESE 103 Query: 119 ------------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPE 147 + + + + + I H + Sbjct: 104 AEWKNRKAKRAGRPQEPPLYTMNDAEGVLKHFVPCEYNEIIRLSEGVEIRFTDAGHLLGS 163 Query: 148 TMALVIRSPVGN---IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 V + G IV +GD + + + + ++ +ST R Sbjct: 164 AFIEVWLTEDGCSKKIVFSGDIG---NMNKPLIRNPQYIAQ-----ADYVVMESTYGDRL 215 Query: 205 GTCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSS--- 260 +E + + G V++ F+ V R + ++ +I + ++ G Sbjct: 216 HRHSAEHIEEFARVIQETLDRGGNVVIPAFA--VGRTQEVLYYIRRIKEEGLVTGHGDFD 273 Query: 261 --------------LKRVVSVAIDVGIIKKDQLFLSDESFGLYP-----REQLIVIATGS 301 K+ + + + ++ +F +E + + Sbjct: 274 VYVDSPLAVEATQVFKKNMLDCYNEETKALVKKGINPIAFKGLKLSVSSQESIAINFDDK 333 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI---- 357 SA G +R+ + + + A+G + ++E V Sbjct: 334 PKVIISAAGMCDAGRIRHH--LKHNLWRPECTILFAGYQAVGTLGRSIIEGKKEVKLFGE 391 Query: 358 ----AEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIA 411 E +SGH L +P+ + +HG+ E +E Sbjct: 392 TIDVEAHIEKIEGISGHADQKGLLTFINSFMEKPKQVFVVHGDDEVCTHFAEKLEKEYGL 451 Query: 412 CVPPVRNGKMLRLFPDPIEIIDE 434 +G + L E I E Sbjct: 452 NAFAPFSGTVYNLAEGKFETITE 474 >gi|116267959|ref|NP_001070751.1| DNA cross-link repair 1B protein [Danio rerio] gi|115528190|gb|AAI24810.1| Zgc:154089 [Danio rerio] Length = 571 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 13/167 (7%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG---DK 128 F++H H DH L WS P+Y SP LL K ++ + I D Sbjct: 28 FLSHMHSDHTCGLSSTWSHR--PIYCSPLTAKLLRLKLQIKQKWIRPLEIGQDHMLMLDD 85 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P + + + G ++TGD++ + Sbjct: 86 LGKERLTVNLIDANH-CPGAVMFLFQGYFGTRLYTGDFRYTPSMLRVPCLQNHI------ 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 I L D+TN S + + I I+++ G +V S Sbjct: 139 -NIDVLYLDNTNCDPTRALPSRQQATQLIKQIIRDHPGYAVVIGLYS 184 >gi|26987974|ref|NP_743399.1| beta-lactamase domain protein [Pseudomonas putida KT2440] gi|24982688|gb|AAN66863.1|AE016314_10 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 252 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --SAAQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G+ + + RV H E + V+ D D +L D Sbjct: 97 --ACGQSLHIGSLEVTAARVEHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|330959286|gb|EGH59546.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 252 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 58/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L VPVY S + + F Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYDVPVYLSSGTLRGMRKPVEVAGF--------FA 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ V +G+ IE V V H E V D +L D+L Sbjct: 98 GGESVQIGSLDIEVVSVAHDALEPTQFVFNDGERRFGLLTDLGSYCSNVLQRYHGLDALM 157 >gi|78777465|ref|YP_393780.1| RNA-metabolising metallo-beta-lactamase [Sulfurimonas denitrificans DSM 1251] gi|78498005|gb|ABB44545.1| RNA-metabolising metallo-beta-lactamase [Sulfurimonas denitrificans DSM 1251] Length = 465 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 73/495 (14%), Positives = 142/495 (28%), Gaps = 107/495 (21%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G G + + GS + I+IDCG F + + D F + Sbjct: 2 VSVTSYGAAGTVTGSCHHVKIGSIN----ILIDCG-MFQGNGDNNKNYD--DFEF---DV 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------- 109 + + +THAH DH G + L + A+ + + Sbjct: 52 SKINYLVLTHAHLDHIGRVPKLIKDGFKGKIIATKATKDIAKVMLLDSANILQEEYKTLR 111 Query: 110 -------------------VYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETM 149 + + + + ++ + I H I + Sbjct: 112 RKARRRGEEDTILEPLYTKDDVKNVFEKKWCTLEYFEEHKLKNHIKISFRNAGH-ILGSA 170 Query: 150 ALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 ++I N +V +GD ++ D D + L +ST R+ Sbjct: 171 FVMIDYQEKNKSKRVVFSGDLGS-PQRLIIDNPD-------SVDEADYLFIESTYGDRKH 222 Query: 206 TCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID-------------IAEQIG 251 + E K G V++ +F+ + R + I+ + + Sbjct: 223 KSLDESIDEFKEAIRTTLKKNGNVIIPSFA--LERTQEILWLLHVMHDSGELPKCSIYLD 280 Query: 252 RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP--------------REQLIVI 297 + + + L V + +I SF +E+ I+I Sbjct: 281 SPLAIKATKLYNRYPVYLSDELIYTPGRGGDPFSFNWLKTSTSSDQSIAINKVKERAIII 340 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 A + L + R + K+ +IF + G I + + Sbjct: 341 AGSGMCTGGRIMHHL---KHRLW--SPKNAIIFVGYQVRG--TLGRSIVDGDKHVKIYGE 393 Query: 358 AEDAECPVHV----SGHPYPNDLKRMYQWIRP----QVLVAIHGEPLHLVAHKELALQEG 409 ++ S H D K + W+RP + + IHGE + +E Sbjct: 394 EIAIRAKIYTINGFSAHA---DQKELIDWVRPIEGLKNIFLIHGEEDKMEIFSREIKKEL 450 Query: 410 IACVPPVRNGKMLRL 424 V +G + L Sbjct: 451 GCESKIVEHGVKINL 465 >gi|150388612|ref|YP_001318661.1| RNA-metabolising metallo-beta-lactamase [Alkaliphilus metalliredigens QYMF] gi|149948474|gb|ABR47002.1| RNA-metabolising metallo-beta-lactamase [Alkaliphilus metalliredigens QYMF] Length = 543 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 64/474 (13%), Positives = 134/474 (28%), Gaps = 90/474 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + I++DCG+ ++L + + + K + + ++H H DH G + L Sbjct: 19 ISTDKHKILLDCGMFQGSNELEAL-----NYEPFQYDPKEIDFLLLSHTHIDHSGRIPKL 73 Query: 88 WSF-LHVPVYASPFAIGLLEAKR------------VYERVSKKIPCISFQAGDKVD---- 130 + ++ + L E R K+ + V+ Sbjct: 74 VKEGFNGKIFCTKATKDLSEIMLVDSGHIQQSDVEWENRKRKRSGKPPIKPLYTVEDALS 133 Query: 131 ----------------VGAFSIESVRVNH----SIPETMALVIRSPVGNIVHTGDWKLDD 170 + S+ H SI E IV +GD + + Sbjct: 134 SLRYFDSVLYNQKINLNESISVRFRDAGHVLGSSIIELWITE-EKDTVKIVFSGDLGMKN 192 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL- 229 ++ D + + + L+ +ST R +++ + ++M VL Sbjct: 193 KPLIR---DPEII-----DDADYLILESTYGNRVHEN-----VEQRMDELMSTINKTVLR 239 Query: 230 ---VTTFSSSVSRIRSIIDIAEQI-----------GRKIVLLGSSLKRVVSVAIDVGIIK 275 V S +V R + +I Q I + V Sbjct: 240 GGTVIIPSFAVGRTQELIYELSQYYKANNELDAFMRIPIYIDSPMAISATEVFKKNSYCF 299 Query: 276 KDQLFLSDESFGLY----------PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEK 325 D+ ++ + + + + + + + G L Sbjct: 300 DDETKKLILGGSNPLDFENLHFVRDHKESMRLNESNYPKVIISASGMCTGGRIRHHLKHN 359 Query: 326 DTVIFSSRAIPGNEV--AIGHIKNRLVEQGVRVIAEDAECPVHV-----SGHPYPNDLKR 378 +S G + +G I ++ + E A SGH DL Sbjct: 360 LWKANNSLIFVGYQAQGTLGRILKDGAKKVKLLGEEIAVLSEIYSIEGFSGHADQTDLIE 419 Query: 379 MYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE 430 +P+ + +HGE L L ++ G ++ D ++ Sbjct: 420 WLGHFKKKPKRVFLVHGEDTSLDNLSSLIKEKFDIPTIIPNMGYSFQIEDDVLK 473 >gi|317127183|ref|YP_004093465.1| metallo-beta-lactamase family protein [Bacillus cellulosilyticus DSM 2522] gi|315472131|gb|ADU28734.1| metallo-beta-lactamase family protein [Bacillus cellulosilyticus DSM 2522] Length = 286 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 NM + G +++++D G+ P+ +++ + AI +TH H D Sbjct: 41 NMCVI--GRQDDNEFVLVDAGM--PESANRIIEMTEERFG----KNSKPKAIILTHGHFD 92 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H GA+ +L + +VPVYA Sbjct: 93 HVGAIIELVNHWNVPVYAHQL 113 >gi|269121243|ref|YP_003309420.1| beta-lactamase [Sebaldella termitidis ATCC 33386] gi|268615121|gb|ACZ09489.1| beta-lactamase domain protein [Sebaldella termitidis ATCC 33386] Length = 256 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 13/141 (9%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 K +ID G F + I K ++ I ITH H DH L L Sbjct: 17 IEMGNKRFLIDAG--FSGKKT------IEKLESINKNISDINGILITHEHSDHIQGLGVL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+Y S + ++ K + K + G ++S V H Sbjct: 69 SRKHDLPIYISRQSYYSIKEK-----IGKIEDKNLNFIEQDLIFGECFVKSFDVMHDAER 123 Query: 148 TMALVIRSPVGNIVHTGDWKL 168 + + + D Sbjct: 124 CLGFSFEYNSKKLTYASDIGF 144 >gi|107103128|ref|ZP_01367046.1| hypothetical protein PaerPA_01004197 [Pseudomonas aeruginosa PACS2] Length = 442 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 99/337 (29%), Gaps = 56/337 (16%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------------VYERV 114 + A+ I+HAH DH G L L + P++A+ LLE R Sbjct: 31 IDAVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSAHIQEKDAEWENRW 90 Query: 115 SKKIPCISFQA-------------GDKVDVG-------AFSIESVRVNHSIPETMALVIR 154 +I S + + +G + H I + + ++ Sbjct: 91 RNRIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFHNAGH-ILGSSIVEVQ 149 Query: 155 SPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 +V +GD ++ + +M +ST R+ ++ Sbjct: 150 FHDQVQPRRLVFSGDLGNTCSPLMRAPSPLSR--------ADVVMLESTYGDRDHRDSND 201 Query: 211 K-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 I D G VL+ +F+ V R + ++ + G ++ V + Sbjct: 202 TLEELAAILDQAHRDGGNVLIPSFA--VGRTQDLLYYLGRF----YQEGRLPQQAVFLDS 255 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL--AQLSRGEMRNVKLAEKDT 327 + F RE + T E L + + M ++ Sbjct: 256 PMAARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINRIKSGAV 315 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 +I S G + H K+ L V+ + Sbjct: 316 IIAGSGMCTGG-RIVHHFKHNLWRPECHVVFPGFQAR 351 >gi|239623763|ref|ZP_04666794.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521794|gb|EEQ61660.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 535 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 67/474 (14%), Positives = 143/474 (30%), Gaps = 99/474 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ +G E+ + G ++IDCG+ + +L ++ Sbjct: 1 MQMRLTFIGADHEVTGSCHFLEVG----ETKVLIDCGMEQGNNVYQNAELPV---SYRE- 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + +F+THAH DH G L +++ V A+ + L +++ Sbjct: 53 ----IDYVFLTHAHIDHAGMLPWIYARGFRGRVIATYATVDLCNIMLKDSAHIQEMEA-E 107 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++ G +E++ + + + + ++KL +D + TD Sbjct: 108 WKNRKARRAGRTEVEALYTMEDAED-----VLKHFEGVAYGQEFKL-NDNLTLRFTDVGH 161 Query: 183 L----------------------CAIGNEG------------ILALMCDSTNAMREGTCI 208 L IGN+ ++ +ST R Sbjct: 162 LLGSASIEIWACEGSHTKKIVFSGDIGNKNKPLIRDPQYIDEADYVVMESTYGNRYHKKG 221 Query: 209 SEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSV 267 I + G V++ F+ V R + ++ + I + ++ G Sbjct: 222 VNHVESLARIIQETLDRSGNVVIPAFA--VGRTQELLYLIRHIKDEKLVKGHD----GFD 275 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIA---TGSQGEPRSALAQLSRGEMRNVKLAE 324 + + + E+ ++ + P L+ ++ E +N+ Sbjct: 276 VYVDSPLAVEATHVFKENMLECYDDETKALVEKGINPIDFPGLKLS-ITSEESKNINFDM 334 Query: 325 KDTVIFS-----------------------SRAIPGN--EVAIGHIKNRLVEQGVRVIAE 359 VI S S G E +G + Q V++ E Sbjct: 335 TPKVIISAAGMCDAGRIRHHLKHNLWRPECSIVFAGYQAEGTLGRLIQDGA-QTVKIFGE 393 Query: 360 DAECPVH------VSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELA 405 + + H +SGH + L RP + +HG+ A ++ Sbjct: 394 EIDVRAHIENIEGISGHADRDGLLTWISSFEKRPDYVFVVHGDEESCTAFADML 447 >gi|53804500|ref|YP_113600.1| metallo-beta-lactamase family protein [Methylococcus capsulatus str. Bath] gi|53758261|gb|AAU92552.1| metallo-beta-lactamase family protein [Methylococcus capsulatus str. Bath] Length = 452 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 81/278 (29%), Gaps = 54/278 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F+ G G + + L G I++DCG+ F + P Sbjct: 1 MELGFI--GATGTVTGSRYLVTEGQCR----ILVDCGL-FQGFKQLRLRNREPFPVA--- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------VYERV 114 +L A+ +THAH DH G + L ++ +P L Sbjct: 51 -PDSLAALVLTHAHVDHSGYIPLLARNGFAGRIHCTPATFDLCRILLPDSGHLQEEEAEY 109 Query: 115 SKKIPCISFQAGDKVDV-----------------------GAFSIESVRVNHSIPETMAL 151 + + + G F H I ++ Sbjct: 110 ANRRGFSRHHPALPLYTREDAERCLDLFEPVDYGREVRLGGEFRFRFQPAGH-ILGAASV 168 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 V+R ++ +GD D L+ +ST R +E Sbjct: 169 VLRGLRSSLAFSGDLG--------RPNDPTMRSPASCPAADFLVVESTYGNRRH--AAED 218 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 ++ I + + +V + +V R +S++ + Sbjct: 219 PVETFGDYIGRTFRRGGVVLIPAFAVGRAQSVLYCIHR 256 >gi|297537812|ref|YP_003673581.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297257159|gb|ADI29004.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 259 Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 37/179 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G IG S + I+ID G + Sbjct: 1 MQIKI--LGCSGGIGA---ELRTTSMLVDQDILIDAGTGVGNLSM--------------D 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL------HVPVYASPFAIGLLEAKRVYERVSKK 117 E + I +TH+H DH + L + + V+A+ + L +V Sbjct: 42 ELLKIDHILLTHSHLDHIAFIPFLLDTVMGIRAEPITVHANKETLETLRLHIFNWKVWPD 101 Query: 118 IP-----------CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G+ ++ + NH +P + + S ++V TGD Sbjct: 102 FNAIPSADNPFLRYNEVKLGETLEFNGRKFTPLPANHVVP-AIGYHVDSGEASLVFTGD 159 >gi|325106516|ref|YP_004276170.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] gi|324975364|gb|ADY54348.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] Length = 268 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 22/160 (13%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + I+ID G+S + ++ + + + A+FI+H H Sbjct: 14 GNCYYIG----NKEEAILIDIGLSCKELEI--------RLARLNLYTSKIKAVFISHEHT 61 Query: 79 DHYGALHDLWSFLHVPVYASPFA-IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + +PVY F L E ++ F A + + VG+ I Sbjct: 62 DHIKGIKTFSKKHKIPVY---FTFATLANTNLQLENINY------FDAENPIRVGSLRIT 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + +H + +I I D + + ++ Sbjct: 113 AFEKHHDAAHPHSFIIEDNDLCIGVFTDLGIVCNNLVRYF 152 >gi|302787062|ref|XP_002975301.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii] gi|300156875|gb|EFJ23502.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii] Length = 769 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 42/325 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+TH H DHY L +Y S L+ + ++ Sbjct: 352 FLTHFHSDHYQG---LTKSFRFGKIYCSMITARLVNLRI----GITWDRLHPLNFNERTK 404 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + + + NH P ++ + ++HTGD++ D + I Sbjct: 405 IDGVWVTLLDANH-CPGAAMILFETHDGKFVLHTGDFR--------FCDDMARIMDILPC 455 Query: 190 GILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGC---VLVTTFSSSVSRIRSIID 245 + L+ D+T + E I+ I I + L+ T+S R+ + Sbjct: 456 RLSTLVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNPSTLFLIGTYSLGKERLFLEVA 515 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 + + + + +G + + + + V+ S Sbjct: 516 RVLRKKIYVGAVKRRM---------LGCLDLSDEDMDWITTSEC-ESSIHVVPLWSIAS- 564 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +A +SR + T++ S N Q +I V Sbjct: 565 FKRMASISRHYH-----GKYTTIVSFSPTGWSFSKGKRGTGNGKRWQQGTIIR----YEV 615 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +LK + + P ++ Sbjct: 616 PYSEHSSFTELKTFVKLLSPVEIIP 640 >gi|302822859|ref|XP_002993085.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii] gi|300139085|gb|EFJ05833.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii] Length = 795 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 42/325 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F+TH H DHY L +Y S L+ + ++ Sbjct: 378 FLTHFHSDHYQG---LTKSFRFGKIYCSMITARLVNLRI----GITWDRLHPLNLNERTK 430 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNE 189 + + + NH P ++ + ++HTGD++ D + I Sbjct: 431 IDGVWVTLLDANH-CPGAAMILFETHDGKFVLHTGDFR--------FCDDMARIMDILPC 481 Query: 190 GILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGC---VLVTTFSSSVSRIRSIID 245 + AL+ D+T + E I+ I I + L+ T+S R+ + Sbjct: 482 RLSALVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNPSTLFLIGTYSLGKERLFLEVA 541 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 + + + + +G + + + + V+ S Sbjct: 542 RVLRKKIYVGAVKRRM---------LGCLDLSDEDMDWITTSEC-ESSIHVVPLWSIAS- 590 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +A +SR + T++ S N Q +I V Sbjct: 591 FKRMASISRHYH-----GKYTTIVSFSPTGWSFSKGKRGTGNGKRWQQGTIIR----YEV 641 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +LK + + P ++ Sbjct: 642 PYSEHSSFTELKTFVKLLSPVEIIP 666 >gi|222481275|ref|YP_002567511.1| exonuclease of the beta-lactamase fold class-like protein [Halorubrum lacusprofundi ATCC 49239] gi|222454651|gb|ACM58914.1| exonuclease of the beta-lactamase fold class-like protein [Halorubrum lacusprofundi ATCC 49239] Length = 791 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 68/405 (16%), Positives = 115/405 (28%), Gaps = 61/405 (15%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 I++D G GVDL ++ L+AI +THAH DHY L VP Sbjct: 31 ILVDAG--------DGVDL-----DSLLSPSDKLVAICLTHAHVDHYAELTA-AHRGDVP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCIS------FQAGDKVDVGA-FSIESVRVNHSIPE 147 +Y SP +L+ I D DV I V H +P Sbjct: 77 IYTSPATATILDDVFDVATNKYDITASEAVTSAITPIDDWTDVVPDIEIHPVPAGH-VPG 135 Query: 148 TMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + + R +I+ TGD+ D D + + + +TN Sbjct: 136 AVGFLFRVTDDDDTHHILATGDFTSRRAG-GFPGFDSDGFIDVD----VLFLTGATN--- 187 Query: 204 EGTCISEKGIKKNI-YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 E I + + I G + T S V + + A + + + Sbjct: 188 ---DKFESAITEALGTAISHAHSGSRTLVTASGLVGPQIAYLLTAITAEYDLHVPIRVVG 244 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKL 322 +V + ++ + + E ++ G + +L L Sbjct: 245 QVAKLYDELDYECDHVTSIPEFGHTDECLESGVITIAGPDVPREQSSGRLFG------VL 298 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQW 382 E G + R + +S HP L +++ Sbjct: 299 QEDPNACVVQLIGSG--------------KTPRTTGQCTIHTHTLSNHPTRETLVEVHEA 344 Query: 383 IRPQVLVAIHGEPLHLVAHKELALQEG---IACVPPVRNGKMLRL 424 I P V H +L+ + +G R Sbjct: 345 IDPTETVITHRHHGAKEEFNDLSGVVWGSGDTDEHILYDGSQWRF 389 >gi|90422274|ref|YP_530644.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90104288|gb|ABD86325.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 244 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 63/188 (33%), Gaps = 36/188 (19%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCGVS-FPKDDLPGVDLVFPDIT 59 +L F+ G G G G + +IDCG S P G+ Sbjct: 1 MQLRFVGCGDAFGSG--GRLNTCFHVSGEQVN--FLIDCGASSLPALKRYGI-------- 48 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYE- 112 R ++ + ITH H DH+G + L V A P I L + + Sbjct: 49 ----LRDDIDLVLITHFHADHFGGVPFLLLEAQFGKRKRPLVIAGPPGIELRLTRLMEAM 104 Query: 113 -------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET--MALVIRSPVGNIVHT 163 + ++ ++ + + + GA + + V H A I + + ++ Sbjct: 105 FEHSSSTKQHFELSVVAIEPNETREFGAVKVSAFPVVHGDSGGPFHAYRIEAEGRTLAYS 164 Query: 164 GDWKLDDD 171 GD + + Sbjct: 165 GDTQWTET 172 >gi|317500576|ref|ZP_07958797.1| metallo-beta-lactamase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089323|ref|ZP_08338224.1| hypothetical protein HMPREF1025_01807 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898009|gb|EFV20059.1| metallo-beta-lactamase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405504|gb|EGG85036.1| hypothetical protein HMPREF1025_01807 [Lachnospiraceae bacterium 3_1_46FAA] Length = 534 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 20/165 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + + ++ K I+IDCG+ D + PG L P Sbjct: 1 MKLTFV--GAAHEVTGSC----HFLQAAGKNILIDCGMEQGPDLYENPG--LPIP----- 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +F+THAH DH G L L ++ + L ++ Sbjct: 48 ---ENEIDYVFLTHAHIDHSGMLPKLAKNGFKGQIFTTFATADLCNIMLRDSAHIQEFEA 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ G E V V + + L++ G + D Sbjct: 105 -EWRNRKGRRAGKPEFEPVYVMQDALDAIELLVPCGYGERITICD 148 >gi|253578284|ref|ZP_04855556.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850602|gb|EES78560.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 209 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 23/170 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN EL LG + N L + + + I++D P D L +++ + Sbjct: 1 MKNLELQKCILGP---VYTNCYLL--KNKETGELIIVD-----PADCLEKIEMKISRMN- 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE----AKRVYERVSK 116 +AI +TH H DH A + ++P+YA +L V+ Sbjct: 50 -----GKPVAILLTHGHFDHILAAQAVKEKYNIPIYACRQEEEMLREPSINMTVHYGQGC 104 Query: 117 KIPCISF-QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I F + D + + FS++ + + ++ ++ +GD Sbjct: 105 SIVPDVFLEDLDVIRLAGFSVQMIHTPGHTKGSCCYYLKDEG--VLFSGD 152 >gi|153814533|ref|ZP_01967201.1| hypothetical protein RUMTOR_00747 [Ruminococcus torques ATCC 27756] gi|145848027|gb|EDK24945.1| hypothetical protein RUMTOR_00747 [Ruminococcus torques ATCC 27756] Length = 534 Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 20/165 (12%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + + ++ K I+IDCG+ D + PG L P Sbjct: 1 MKLTFV--GAAHEVTGSC----HFLQAAGKNILIDCGMEQGPDLYENPG--LPIP----- 47 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + +F+THAH DH G L L ++ + L ++ Sbjct: 48 ---ENEIDYVFLTHAHIDHSGMLPKLAKNGFKGQIFTTFATADLCNIMLRDSAHIQEFEA 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ G E V V + + L++ G + D Sbjct: 105 -EWRNRKGRRAGKPEFEPVYVMQDALDAIELLVPCGYGERITICD 148 >gi|288802423|ref|ZP_06407862.1| metallo-beta-lactamase superfamily protein [Prevotella melaninogenica D18] gi|288334951|gb|EFC73387.1| metallo-beta-lactamase superfamily protein [Prevotella melaninogenica D18] Length = 267 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + FL G G G N L + +MIDCGV G+ + + Sbjct: 1 MRFLSFG-SGSSG-NCYLL----YTDTDCLMIDCGV--------GIRSLKKHFHNYGLQL 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + + ITH H DH ++ + L +PVY + + R + Q Sbjct: 47 NMVHNVLITHDHADHVKSVGSISGDLQLPVYTTEDVHRGISQNWCVRRKVDQQYVKFVQK 106 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G+++ +G F + V H + + + D Sbjct: 107 GEEITIGEFKVTPFGVPHDSTDCVGYSVEYEGIRFTLITDCG 148 >gi|258646643|ref|ZP_05734112.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] gi|260404064|gb|EEW97611.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] Length = 361 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 28/220 (12%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ GG G+ G + G R ++D G G+D V PD+T Sbjct: 2 EMDMQITIAGGCGDFGRSCFFVEGG----RHAFIVDAGT-----STDGLDRV-PDLT--A 49 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 ++ +FITH+H DH GA+ S V + ++ K + Sbjct: 50 EQVARAEYLFITHSHRDHTGAIGYFESLGFAGSVLLTNQTYRQMKEK------PGNTMIL 103 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 A + FS R H ++ I + +GD++ DD V D Sbjct: 104 DSTAPELELERDFSFRWGRSGH-CAGSVWYDISCEGKKLFFSGDYRSDD---PFYVCDDA 159 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 + + D+ + + I +++ Sbjct: 160 E-----GKTADVAVLDAAYPGDRTGADMRRSVLDKILELV 194 >gi|238917336|ref|YP_002930853.1| metallo-beta-lactamase family protein [Eubacterium eligens ATCC 27750] gi|238872696|gb|ACR72406.1| metallo-beta-lactamase family protein [Eubacterium eligens ATCC 27750] Length = 537 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 70/507 (13%), Positives = 136/507 (26%), Gaps = 117/507 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD-----DLPGVDLVFPDITF 60 + LG E+ + + I++DCG+ D +LP V Sbjct: 1 MKLTFLGADHEVTGSCHFLQAAGLN----ILVDCGMEQGNDVYENQELPVV--------- 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEA------------ 107 ++ I +THAH DH G + ++ + VY++ L E Sbjct: 48 ----ASDVDCILLTHAHIDHSGLIPLMYVNGFRGQVYSTSATAQLCEIMLRDSAHIQMFE 103 Query: 108 -------------KRVYERVSKKIPCISFQAGDKVDV---------GAFSIESVRVNHSI 145 K + V I V H + Sbjct: 104 AEWRNRKAARSGGKLKEFVPLYDMDAAVNVCKQFVGCEYDRVYDIAEGIKIRFTDVGH-L 162 Query: 146 PETMALVIRSPV--------GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + ++ + + IV +GD + I+ D ++ + Sbjct: 163 LGSASIEVWATEKTENGDVTEKIVFSGDIGNINKPIIKDP--------KHVTDADYVVME 214 Query: 198 STNAMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 ST R + + + G V++ +F+ V R + ++ I +I Sbjct: 215 STYGNRSHGGTPNYVEDLTNIFKRTFERG-GNVVIPSFA--VGRTQELLYIIRKIKED-N 270 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 L+G + + + + + E + ++ G L + G Sbjct: 271 LVGRDFDVYMDSPLAIEATNIFIKNVESC----FDDEAVELVRKGINPLSFPGLKYATTG 326 Query: 316 -EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC----------- 363 E + + VI SS + H+K+ L ++ + Sbjct: 327 DESKQINFDPNPKVIISSSGMCEAGRIRHHLKHNLWRPECTIVFVGYQAVGTTGRIIVDG 386 Query: 364 -------------------PVHVSGHPYPNDLKRMYQW--IRPQVLVAIHGEPLHLVAHK 402 SGH + L +P+ + +HGE Sbjct: 387 AEEIKLFGEPIQIKAEIVQLKGSSGHADKDGLLCWINAFDTKPKKVFVVHGEDSVCDEFT 446 Query: 403 ELALQEGIACVPPVRNGKMLRLFPDPI 429 E +E G D + Sbjct: 447 ECLKEEYGYDAMAPYTGGSYDFIADRV 473 >gi|325298133|ref|YP_004258050.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317686|gb|ADY35577.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 259 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 32/219 (14%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I+IDCG F + L PD + + ITH H DH G L DL Sbjct: 40 IETQGVRILIDCGPDFREQS-----LRLPDFQP-------IDGVLITHEHYDHVGGLDDL 87 Query: 88 WS---FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA-GDKVDVGAFSIESVRVNH 143 F VPVYA + L+ + Y P + + F + Sbjct: 88 RPFCHFRDVPVYAEQYTADRLKTRIPYCFAEHPYPGVPRIPLAEVEPYVPFKVT------ 141 Query: 144 SIPETMALVIRSPVGNIVH----TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 + ++H +++ A + D+T+ + EG+ L Sbjct: 142 ---GGAGQEVEVVPLRVIHGRLPILGFRIGKMAWITDMTEMPAETYACLEGLDCLFM--- 195 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 NA+R + + + + + + + S + Sbjct: 196 NALRLTPHPTHQSLSQALEQVERIRPRKAYFIHASHQLG 234 >gi|325270982|ref|ZP_08137569.1| metallo-beta-lactamase superfamily protein [Prevotella multiformis DSM 16608] gi|324986779|gb|EGC18775.1| metallo-beta-lactamase superfamily protein [Prevotella multiformis DSM 16608] Length = 268 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L FL G G G N L G+ +MIDCGV G+ + + Sbjct: 2 LKFLSFG-SGSSG-NCYLLYTGT----DCLMIDCGV--------GIRSLKKHFHNYGLQM 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 K + + ITH H DH ++ + L +PVY + + R K + Sbjct: 48 KMVHNVLITHDHADHVKSVGSISGDLQLPVYTTEDIHRGISQNWCVRRKIDKALAMCLAK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G+++ +G F++ V H + + I D Sbjct: 108 GEEIKIGEFAVTPFGVPHDSTDCVGYSIVQGGMRFTLVTDCG 149 >gi|319646703|ref|ZP_08000932.1| hypothetical protein HMPREF1012_01969 [Bacillus sp. BT1B_CT2] gi|317391291|gb|EFV72089.1| hypothetical protein HMPREF1012_01969 [Bacillus sp. BT1B_CT2] Length = 245 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 41/236 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S ++IDCG + L + L P + L A+ ++H H DH + Sbjct: 21 GYLFQSGDYSVLIDCGSAV----LSKLQLFLP--------VEELDAVILSHYHHDHIADV 68 Query: 85 H----------DLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L P+Y PF E + +++ + +G Sbjct: 69 GPLQFAKLVGSFLGKGADALPIYGHPFD----EEQFSKLTYKTHTAGLAYDPTQPLAIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 F+ ++ H + + A+ + V ++V+T D + I +EG Sbjct: 125 FTFTFLKTVHPV-DCFAMRVTDGVHSVVYTADSSFQEAFIPF------------SEGADL 171 Query: 194 LMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ + A ++G + + L+ T + +I+ A+ Sbjct: 172 LISECNFYADQDGRSAGHMNSLEVGRIAAEAGATGQLLLTHLPHFGEHQKLIEEAQ 227 >gi|268610791|ref|ZP_06144518.1| metallo-beta-lactamase family protein [Ruminococcus flavefaciens FD-1] gi|268611697|ref|ZP_06145424.1| metallo-beta-lactamase family protein [Ruminococcus flavefaciens FD-1] Length = 261 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 14/128 (10%) Query: 35 IMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I+IDCGVSF + ++ + + A+FITH H DH L L + Sbjct: 25 ILIDCGVSFKRLSAALEINNI---------PLSAVQAVFITHEHSDHVAGLKMLTKKTGM 75 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVY L+ +++S P I G+ + H ++ I Sbjct: 76 PVYGQKRT---LQRLCDSDKISPDSPVIDMTGIAINCAGS-EVRCFNTPHDTIQSCGYRI 131 Query: 154 RSPVGNIV 161 + + Sbjct: 132 HTDDDKLC 139 >gi|295676908|ref|YP_003605432.1| beta-lactamase domain protein [Burkholderia sp. CCGE1002] gi|295436751|gb|ADG15921.1| beta-lactamase domain protein [Burkholderia sp. CCGE1002] Length = 257 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S +S +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALLVEAHSGASTTRVLLDCGFSAREVER--------RLARLGASA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L AI ITH H DH G+ L +P+Y S + A + Sbjct: 51 EHLDAILITHEHSDHIGSALTLARKWSIPLYMSWGTARAVGA------DDADVDLQVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + + D Sbjct: 105 DEAVAIGELSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGT 147 >gi|253997424|ref|YP_003049488.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253984103|gb|ACT48961.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 670 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 40/268 (14%) Query: 6 LVFLPLGGVG-EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F +G G + + + Y + + ++DCG+ + D + Sbjct: 1 MRFRFVGACGGSVTGSCTHFSYNRTNIQ--FLVDCGLIQGEG-----DESIVNSKPFPFR 53 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------AKRVYERVSK 116 + I +THAH DH G + L+ V + + + Sbjct: 54 PSEIEFILLTHAHLDHCGLIPRLYKEGFTGKVICTTATARMAKISLTDSAKHLKDIYSEN 113 Query: 117 KIPCISFQAGDKVD----------VGAFSIESVRVNHSIPETMALVIRSPVGN----IVH 162 + I F+ D+ R H + V + +V Sbjct: 114 DVKKIRFECIDQRKEFGLSRLLPIHTDLFASFSRTAHILGSATITVSWINDADEKASVVM 173 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN------AMREGTCISEKGIKKN 216 +GD + G A++ +ST + + K Sbjct: 174 SGDLGNNTKENPYQPLLASRQGVFG--YPDAIVVESTYGAGVRDSECSDYDARLSALHKV 231 Query: 217 IYDIMKNAKGCVLVTTFSSSVSRIRSII 244 I D + N K +++ FS + R + ++ Sbjct: 232 IQDEVFNKKSLLIIPAFS--IQRTQELL 257 >gi|229086831|ref|ZP_04218993.1| Metallo-beta-lactamase [Bacillus cereus Rock3-44] gi|228696475|gb|EEL49298.1| Metallo-beta-lactamase [Bacillus cereus Rock3-44] Length = 209 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 6 MPLGPLQ---TNAYILS---NDQKECIIFDPGSE-------GEKLV----TYLQEEQLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL--------EAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ + H+PVY L + + ++ K Sbjct: 49 LAVLLTHAHFDHIGAVDTVRDAFHIPVYVHKEEADWLGDANVNGSQIFMMNRSITAKQAD 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + +G+F+ E P +++ + V +GD Sbjct: 109 QIIEGEGTLTIGSFTFEMFETPGHSPGSVSYY--CKEASAVFSGDVLF 154 >gi|118594448|ref|ZP_01551795.1| Beta-lactamase-like protein [Methylophilales bacterium HTCC2181] gi|118440226|gb|EAV46853.1| Beta-lactamase-like protein [Methylophilales bacterium HTCC2181] Length = 256 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 11/143 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + ++IDCG + + + + + + AI +TH HEDH Sbjct: 15 FVVQDKDTSLLIDCGFGLAETEKRLDNQGI--------KAEKITAILLTHEHEDHIRGAF 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L + +P+Y + + K +S +I + ++ + V H Sbjct: 67 SLANKFKIPIYLTHGTYKMCSKKIK---ISFEIEYQFIDGQKPFQIKTIAVTPIVVPHDA 123 Query: 146 PETMALVIRSPVGNIVHTGDWKL 168 E + + V + D Sbjct: 124 REPVQFKFDTGVTSFAIITDLGY 146 >gi|255037492|ref|YP_003088113.1| beta-lactamase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950248|gb|ACT94948.1| beta-lactamase domain protein [Dyadobacter fermentans DSM 18053] Length = 466 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 68/463 (14%), Positives = 133/463 (28%), Gaps = 100/463 (21%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 +++DCG+ G+ + F K + + ++HAH DH G L L Sbjct: 21 TEKGTKVLLDCGL------FQGIQTDEFNQEFGFKPAD-VDYVILSHAHIDHSGLLPRLV 73 Query: 89 SF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC------------------ 120 P+Y + L + ER++K+ Sbjct: 74 RKGFKGPIYCTAATADLCRVMLLDSAHIQEKDLERINKRRQKQGRPLLEELYNAEDAAQA 133 Query: 121 ----ISFQAGDKVDVG---AFSIESVRVNH---------SIPETMALVIRSPVGNIVHTG 164 + + G +G S+ H SIP+ + TG Sbjct: 134 LSLLKTVRYGQTFFLGEENEISVFLTDAAHLLGSAAVHLSIPDGGTF------KQVTFTG 187 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI--SEKGIKKNIYDIMK 222 D D+ ++C+ST R + + + + Sbjct: 188 DIG--------RPEDRILRKPEPFPQADYIICESTYGDRLHEKEIDMHAHLLRIVQETCV 239 Query: 223 NAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDVGIIK 275 +G +++ F+ + R + +I +Q+ + + R ++ + Sbjct: 240 RRRGKLIIPAFA--IDRTQELIYALDQLSSSGQLPQIPVYIDSPLAIRATAIMKEHDECF 297 Query: 276 KDQLFLSDESFGL--------YPREQLIVIATGSQGEPR-----SALAQLSRGEMRNVK- 321 ++ E G Y + IA + EP S +A+ R + Sbjct: 298 NPEILEYIEKDGDAFAFPYLNYISDVQESIALNDRKEPCIIISASGMAEAGRIKHHIKNN 357 Query: 322 -LAEKDTV----IFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 T+ S+ + G N E+ + E SGH +++ Sbjct: 358 IGDPDSTILLVGYASANTLAGALKRGDRQVNIFGER--LDVKCRVETMDSFSGHGDYSEM 415 Query: 377 KRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 P + + +HGE VA K + G + Sbjct: 416 LDFLSCQTPERVKEVFLVHGEYETQVAFKLKLEKAGFRKIHIP 458 >gi|309807100|ref|ZP_07701079.1| hypothetical protein HMPREF9212_0815 [Lactobacillus iners LactinV 03V1-b] gi|308166530|gb|EFO68730.1| hypothetical protein HMPREF9212_0815 [Lactobacillus iners LactinV 03V1-b] Length = 131 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 28/59 (47%) Query: 501 HKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + TT+ + ++ D L++ + + L L K G++P+V + ++++ R Sbjct: 1 MDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKFLYKETGRRPVVLPIVMEVNQNR 59 >gi|297170680|gb|ADI21704.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 259 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK--NLMAIFITHAHEDHYGALHDL 87 + I++D G+S L G + D + L A+F+TH H DH + L Sbjct: 21 TEDATILVDAGLS--AKKLTG---LLAD-----EGLDTGELDAVFLTHEHADHSAGIRGL 70 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P++A+ ++A+ ++ F+ G + ++ V H + Sbjct: 71 SKKASLPIFANQDTANAVQAQLA-----RRPNWQIFETGHTFNFRGLRVQPFSVPHDAYD 125 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + ++ + + L VTD + E I A Sbjct: 126 PVGFYFEWGGEDLFNPLE-------SLAWVTDLGYAPELVKEKIAQASILVIEANHCPRM 178 >gi|313895738|ref|ZP_07829294.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975864|gb|EFR41323.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 251 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 28 SPSSRKWIMIDCGVSFP----KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 +++D G+S GVDL +++ A+ +TH H DH Sbjct: 17 VELDGTRLLVDAGISAARIKKGLARHGVDL------------QSIDAVLVTHEHIDHVRG 64 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L L +P+ A+ + ++ E + ++ ++ +G I+S +H Sbjct: 65 LKTLSKQYRLPILATQGTLENIDG---GEAFADEMHVVTGD----FSIGGVRIQSFATSH 117 Query: 144 SIPETMALVIRSPVGNIVHTG 164 + I + T Sbjct: 118 DAADPCGFRIEGSYCFTLATD 138 >gi|21357063|ref|NP_649548.1| Snm1 [Drosophila melanogaster] gi|7296732|gb|AAF52011.1| Snm1 [Drosophila melanogaster] gi|16198055|gb|AAL13814.1| LD28027p [Drosophila melanogaster] gi|220945898|gb|ACL85492.1| Snm1-PA [synthetic construct] gi|220955582|gb|ACL90334.1| Snm1-PA [synthetic construct] Length = 763 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 105/335 (31%), Gaps = 56/335 (16%) Query: 68 LMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + F+TH H DH G L P+Y SP + L+ + Sbjct: 285 IEGVTHYFLTHFHADHYIG----LTKKFCHPLYVSPISARLVRTFIK----LDETHIHEI 336 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDS 182 +DV + ++ NH P + + S I+HTGD++ D +S Sbjct: 337 DVDQTLDVDGVQVTALEANH-CPGALMFFFKLSSGECILHTGDFRA--------SADMES 387 Query: 183 LCAIGNE-GILALMCDSTNAMREGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSS 236 L N I L D+T + + D++ KNA +L+ S Sbjct: 388 LPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRILIVCGSYV 447 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + + + +A++ ++ + + V + L +I Sbjct: 448 IGKEKIWLALAKEFTMRVWTES-------NRSTAVRCLNWPDLDSVLTEDRSGANLHVIA 500 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + S + + + +S+ G Sbjct: 501 MGKISYPSLVDYFTEFEDQYDMLLGIRP-SGWEKNSKPSYG------------------- 540 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + S H +L+R ++++P+ +++ Sbjct: 541 -KRISTIGIEYSEHSSYKELERFVRFLKPKRVIST 574 >gi|319645029|ref|ZP_07999262.1| YqgX protein [Bacillus sp. BT1B_CT2] gi|317392838|gb|EFV73632.1| YqgX protein [Bacillus sp. BT1B_CT2] Length = 207 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 32/163 (19%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ D G + +I + Sbjct: 1 MPLGPIQ---TNAYILS---NDDGTCLIFDPG---SESGKLNA--------YIKENGLKP 43 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASP-----FA------IGLLEAKRVYERVSKK 117 +A+ +THAH DH GA+ ++ ++PVY LL + ++ + Sbjct: 44 LAVLLTHAHFDHIGAVDNVRKEWNIPVYVHKNEAEWLTDPSLNGSALLTG----QTITAE 99 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +G F++ + P +++ + Sbjct: 100 KADHLIEEEGDLKIGPFTLRMLFTPGHSPGSVSYYAEEENLIV 142 >gi|315925636|ref|ZP_07921846.1| metallo-beta-lactamase superfamily protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621177|gb|EFV01148.1| metallo-beta-lactamase superfamily protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 274 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 19/149 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N +G R +++D G+S + L D V P L I ITH Sbjct: 24 GNCLYVAHG----RTRLLVDAGLSGRKIEQGLVSAD-VLP---------TELDGILITHE 69 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L H+P+YA+ EA F G D+G I Sbjct: 70 HRDHIHGAGVLSRRYHLPIYANAATW---EAMAPELGKIDGANVRFFVTGVPFDIGDLQI 126 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +S ++H E + I S ++ D Sbjct: 127 DSFPISHDAAEPVGFAIDSGNHSLGIATD 155 >gi|239626378|ref|ZP_04669409.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516524|gb|EEQ56390.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 265 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 52/160 (32%), Gaps = 18/160 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G S I++D G+S + L + L D++ I ITH Sbjct: 12 GNCIYIG----SDDTHILVDAGISNKRIQQGLNEIGLTGNDMS----------GILITHE 57 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L L H+PVY + + + A + +G + Sbjct: 58 HSDHIKGLGVLSRKYHIPVYGTRETLDEI-ACSSSLGEFDRELLTPVCPDVDFMLGDLHV 116 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDW-KLDDDAILG 175 + ++H +A +R ++ D D I Sbjct: 117 KPFSIDHDAANPVAYRVRCGSKSVAVATDMGHFDQYIIDN 156 >gi|294794051|ref|ZP_06759188.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] gi|294455621|gb|EFG23993.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] Length = 268 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 25/169 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N + I+ D G+S +D+ + IF++ Sbjct: 18 GNCTVI----KKGNSVILHDVGISCRRIVNGLKELQIDM------------AQVEGIFVS 61 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L L +PVY ++ K + K I + +G+ Sbjct: 62 HEHSDHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKNRLIELT-KGSLTLGSL 116 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +E V+H + + + + + D + D IL + D L Sbjct: 117 IVEPFSVSHDAADPIGINVFAGNDKATIVTDTGVISDDILRRIDDTTLL 165 >gi|326316168|ref|YP_004233840.1| beta-lactamase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373004|gb|ADX45273.1| beta-lactamase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 258 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 54/167 (32%), Gaps = 30/167 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N + + + +++DCG+ + Sbjct: 2 LRFKNLG-SGSSG-NATIVEGRCGTQVRRLLVDCGLG---------------PRQLAGRL 44 Query: 66 -------KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ AIFITH H DH G L + +P + S + A Sbjct: 45 GEAGLAIDDIDAIFITHEHSDHVGGLQKIALRHRIPAWMSHGTHEAIGA------PDLDG 98 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ +D+GAF V H E + L +I D Sbjct: 99 LLHLTADGESIDLGAFEARPFTVPHDAREPLHLRCSDGATHIGLLTD 145 >gi|89100445|ref|ZP_01173308.1| YhfI [Bacillus sp. NRRL B-14911] gi|89084874|gb|EAR64012.1| YhfI [Bacillus sp. NRRL B-14911] Length = 244 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 49/261 (18%) Query: 4 EELVFL-PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L + P GG + N A GY + +++DCG V + I+ Sbjct: 1 MKLTVIGPWGGYPK--GNEASAGYLLEHNGFRLLVDCGSG-----------VLSKMQQII 47 Query: 63 KERKNLMAIFITHAHEDHYGAL----------HDLWSFLHV-PVYASPFAIGLLEAKRVY 111 + + L A+ I+H H DH + L + PVYA E + + Sbjct: 48 Q-PEELDAVIISHYHPDHIADIGVLQHARLIQGFLGKKMDTLPVYAHR------ENPQEF 100 Query: 112 ERVSKK--IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 ++S K ++ +++++G F+I ++ +H P A+ + IV+T D Sbjct: 101 SKLSYKDITEGKEYKPDEELNLGPFTITFLKTDHPAP-CYAMRFEAEGNAIVYTADTSYK 159 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCV 228 ++ + + G L+ + + G + + A Sbjct: 160 EE--------LAAFAS----GASLLVSECNFYGNQNGKNAGHMNSYDA-GRLAEKAGAEQ 206 Query: 229 LVTTFSSSVSRIRSIIDIAEQ 249 LV T + + + + + Sbjct: 207 LVLTHLPHYGELSKLAEESAR 227 >gi|114564754|ref|YP_752268.1| RNA-metabolising metallo-beta-lactamase [Shewanella frigidimarina NCIMB 400] gi|114336047|gb|ABI73429.1| RNA-metabolising metallo-beta-lactamase [Shewanella frigidimarina NCIMB 400] Length = 490 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 97/359 (27%), Gaps = 77/359 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G E+ + L + +++DCG+ + + + A+ Sbjct: 9 GATQEVTGSCHLL----TVKGQQVLLDCGLIQGSKAD-----ALRNHDPFPFDATQIHAV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK------------- 117 ++HAH DH G L L + P+Y L + + ++ Sbjct: 60 VLSHAHIDHSGRLPYLINQGFTGPIYTQKATAQLCDVMLRDAAMLQERDTDRQNKKRAKH 119 Query: 118 ------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS---- 155 + G +V V + I + + + Sbjct: 120 DLELLEPLFTEKDVDQVMAQFVMVDYGQRVQVADAVEVCLSDAGHILGSAVVELWLGNKP 179 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK--GI 213 +V +GD +L D T E ++ +ST R + + Sbjct: 180 EQKKLVFSGDLGRAGMPVLDDPTFI--------EQADLVLMESTYGDRLHRSWEDTLVEL 231 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 K + ++G +L+ FS +G S + + + Sbjct: 232 KSIFKRTTRESRGNILIPAFS----------------------VGRSQELLYLFHLYAKE 269 Query: 274 IKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + +S ++ V + ++S G + AE S Sbjct: 270 WDLSRWRICLDSPMAIKATEVYVNNYPLMDDDFKRFTRMSPGNHPLLSSAEFVCSTEES 328 >gi|209525357|ref|ZP_03273898.1| beta-lactamase domain protein [Arthrospira maxima CS-328] gi|209494208|gb|EDZ94522.1| beta-lactamase domain protein [Arthrospira maxima CS-328] Length = 567 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 128/398 (32%), Gaps = 63/398 (15%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIM-KERKNLMAIFI-THAHEDHYGALHDLWSF-L 91 I++DCG+ DI+ ++ + ++ + I +HAH DH L L Sbjct: 60 ILLDCGLR--------------DISPLLTSSQASIADLVICSHAHADHVRGLLALHESCP 105 Query: 92 HVPVYASPFAIGLLEAKRVYE---RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 +P+YAS LL E K + SI H +P Sbjct: 106 ELPIYASDVTSQLLPINWPEELSSGQMPKFCQPLPLRTEVRLKEGLSITLFPAGH-LPGA 164 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN--AM 202 ++++ + +TGD+ L + ++ + L + L+ + + A Sbjct: 165 TCMLLKYNAPNRTYKLFYTGDFFLSNSRLVEGLP----LGELRGLKPDVLILEGSYGTAR 220 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 E + + IY + + VL+ T + + + ++ + G + Sbjct: 221 YPHRRQLENQLAERIYRAIA-SGYSVLIPTPALGLGQELLMLLRSHHY-----FTGRDID 274 Query: 263 RVVSVAIDVGI------IKKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLS- 313 V + G + + + + E++ E L Q Sbjct: 275 IWVDGQVQTGCDIYLELLPHFPANIQNFAQHQPLFWDERIKPRVRRLSPELLPELEQSPC 334 Query: 314 -------RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + ++ + +F S PG+ I + N E Sbjct: 335 IVIVDDETDIEQYLRYRPRLWTLFLSE-TPGHTREISTLVN---------SGEILLESYF 384 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKEL 404 ++ H ++ +RPQ ++ +HG P++L L Sbjct: 385 LAEHCDGPGTTQLIHNLRPQHVIFVHGSPIYLADLTNL 422 >gi|94970916|ref|YP_592964.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94552966|gb|ABF42890.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 476 Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats. Identities = 67/480 (13%), Positives = 142/480 (29%), Gaps = 90/480 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKW---IMIDCGVSFPKD----DLPGVDLVFPDITFIMK 63 LG G + + L + S ++IDCG+ F + D P Sbjct: 7 LGAAGVVTGSKHLVNTAADESGTRGFQLLIDCGL-FQGQKEWRERNWRDTPIP------- 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSK 116 + + A+ +THAH DH G + L P+YA+ + L E + Sbjct: 59 -AREIDAVVLTHAHLDHTGWIPRLVKEGFTGPIYATSATVDLCGVILPDSGHLQEEDAAF 117 Query: 117 KIPCISFQAGDKVDVGAFS-----------IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 S + + + ++ + PE +R+ + Sbjct: 118 HNKIKSSKHDPALPLYTMQEALDSLKLFKAVDFEKQTDVSPELSFRYVRAAHILGSSMVE 177 Query: 166 WKLDDD---AILGDVTDKDSLC--AIGNEGI-----------LALMCDSTNAMREGTCIS 209 + + ++ D + + + ++ +ST RE Sbjct: 178 LTVKQNGSSKLVLFSGDIGRVRDTEVAPGKVVRSGPYEGESADIVVMESTYGNREHPKND 237 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLK 262 + + G V+V F+ V R + ++ + +Q+ + Sbjct: 238 PRPEMAKLIRDTVGRGGSVVVPAFA--VERTQKLVFMVKQMMENNEIPKVPVHCDSPMAI 295 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFG----------LYPREQLIVIATGSQGEPR---SAL 309 + V + + D+ + +G +++ I + + S + Sbjct: 296 KAVEIFLKHEEEFTDETKRLIDQYGSPLTWPGFYFDTTQQESKKINNSNYPQIIISSSGM 355 Query: 310 AQLSRGEMRNVK--LAEKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGVRVIAE 359 A R + + K+ V+F PG E + I ++V +V Sbjct: 356 ATGGRIQHHLAQRLPDPKNLVLFIGFQAPGTRGRQIKDGEKEV-KIFGQIVPVRAQVAT- 413 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 S H ++L + P +HGEP ++ ++ V + Sbjct: 414 ----LEQFSDHADTSELLEWLHTFKKAPSQTWLVHGEPDAAQKLRDAMIKALHWNVNVAQ 469 >gi|320108414|ref|YP_004184004.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] gi|319926935|gb|ADV84010.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] Length = 356 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 19 MNMALYGYGSPSS-------RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 M M + GS + I++D G+S + + + + + + L AI Sbjct: 1 MRMTVLASGSKGNSAVVSSSGTRILVDAGLSCRE--------LMRRMAMVGENPETLDAI 52 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFA 101 ITH H DH L L +PVY + Sbjct: 53 LITHEHADHVAGLPVLARKFGIPVYFTEAT 82 >gi|261418911|ref|YP_003252593.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|319765728|ref|YP_004131229.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261375368|gb|ACX78111.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|317110594|gb|ADU93086.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 244 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 44/251 (17%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + L+ + +++DCG G + T + NL A+ I+H H D Sbjct: 20 SAYLFEHDGFC----LLVDCGS--------GALAKLQNYTAVE----NLDAVIISHYHYD 63 Query: 80 H---YGALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 H G L + L P+Y ++ + + IS+ Sbjct: 64 HIADIGPLQYARLIHKNLGADLPVLPIYGHVEDEA-AFSRLTHSGI---TEGISYDPNGT 119 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + VG FSI ++ H +P A+ I + +V+T D + + Sbjct: 120 LAVGPFSITFMKTVHPVP-CYAMRITAGGKTVVYTADSSYIPEFLPF------------A 166 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 +G L+C+ + + + I + A+ L T V R +++ A Sbjct: 167 KGADLLICECNFYAGQNAAPAGHMTSEEAAAIAEGARVGELWLTHLPHVGRHEQLVEEAG 226 Query: 249 QIGRKIVLLGS 259 + R ++ L Sbjct: 227 RTFRGVIRLAR 237 >gi|323340913|ref|ZP_08081162.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus ruminis ATCC 25644] gi|323091575|gb|EFZ34198.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus ruminis ATCC 25644] Length = 269 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 19/166 (11%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 ++ L G G N+ + + ++ID G+S K + + I Sbjct: 7 QMKISVLASGSSG----NVTYVE----TEKHKVLIDAGLSGKKIETL--------MNSIG 50 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + K++ ++F+TH H DH + L + VYA+ + K + +K Sbjct: 51 RTLKDVDSLFVTHEHTDHCQGVGVLARRYGMNVYANEGTWDAMSKKVGKIPLDQK---HV 107 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 F+ G + + IES V+H E + + D Sbjct: 108 FKCGSVLSLDDLDIESFGVSHDASEPQFYELHHHDSSFAIVTDTGY 153 >gi|329893758|ref|ZP_08269846.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC3088] gi|328923481|gb|EGG30795.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC3088] Length = 267 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 21/134 (15%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFL 91 ++IDCG S + + + K+L AI +TH H DH G + L Sbjct: 24 VLIDCGFSLKETE-----------RRLATRGLSGKDLTAILVTHEHGDHIGGVGVLSRRF 72 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 +PVY S + R + F AGD + +I+SV V H + Sbjct: 73 KLPVYMSHGTH-------LSGRCEDVYQRVCFDAGDAFRINDLNIQSVLVPHDARQPCQY 125 Query: 152 VIRSPVGNIVHTGD 165 V+ + D Sbjct: 126 VVEHQGLKVGILTD 139 >gi|167462691|ref|ZP_02327780.1| Metallo-beta-lactamase superfamily protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 141 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 22/153 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIM 62 ++ L G G N G I+ID G+ + + + P Sbjct: 1 MDIKILASGSSG----NCIHVQSGETG----ILIDAGLPKTKIEKRLLTNDIDP------ 46 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + AIFITHAH DH L L + +PV+AS + + + Sbjct: 47 ---TAIKAIFITHAHADHIKGLP-LANKYKIPVFASEGEW---KDIDSVDDDLCRFIIKH 99 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 A VD+G + R +H E + I Sbjct: 100 SGAYTAVDLGEIKLSPFRTHHDAYEPLGYAIED 132 >gi|170733447|ref|YP_001765394.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169816689|gb|ACA91272.1| beta-lactamase domain protein [Burkholderia cenocepacia MC0-3] Length = 258 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPG-VDLVFPDITFIMK 63 + F LG E N + S ++ +++DCG S + + G ++L D Sbjct: 1 MRFASLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIAD------ 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L AI ITH H DH G+ L +P+Y S + A + Sbjct: 53 ----LDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 103 WGDETAAIGDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGM 147 >gi|254247813|ref|ZP_04941134.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124872589|gb|EAY64305.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 258 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPG-VDLVFPDITFIMK 63 + F LG E N + S ++ +++DCG S + + G ++L D Sbjct: 1 MRFASLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIAD------ 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L AI ITH H DH G+ L +P+Y S + A + Sbjct: 53 ----LDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 103 WGDETAAIGDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGM 147 >gi|148546512|ref|YP_001266614.1| beta-lactamase domain-containing protein [Pseudomonas putida F1] gi|148510570|gb|ABQ77430.1| beta-lactamase domain protein [Pseudomonas putida F1] Length = 252 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --SAAQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G+ + + RV H E + V+ D D +L D Sbjct: 97 --ACGQSLRIGSLEVTAARVEHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|107028727|ref|YP_625822.1| beta-lactamase-like [Burkholderia cenocepacia AU 1054] gi|116690114|ref|YP_835737.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897891|gb|ABF80849.1| beta-lactamase-like protein [Burkholderia cenocepacia AU 1054] gi|116648203|gb|ABK08844.1| beta-lactamase domain protein [Burkholderia cenocepacia HI2424] Length = 258 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPG-VDLVFPDITFIMK 63 + F LG E N + S ++ +++DCG S + + G ++L D Sbjct: 1 MRFASLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIAD------ 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L AI ITH H DH G+ L +P+Y S + A + Sbjct: 53 ----LDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 103 WGDETAAIGDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGM 147 >gi|116754642|ref|YP_843760.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116666093|gb|ABK15120.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 230 Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 64/213 (30%), Gaps = 19/213 (8%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 +GG G G + Y +ID G+ VD + ++ E Sbjct: 9 RVYAVGGPGITGGDDCCV-YLVDCGADLALIDAGLG------RSVDNILRNVQSAGYEPH 61 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--------AKRVYERVSKKI 118 + I TH H DH G + + + V A +E A + + Sbjct: 62 WIKYIIATHCHIDHIGGIAPIVNLYGPKVIAHELDRKGIEEVHDDLTAADLYGVKYTPTK 121 Query: 119 PCISFQ-AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 IS + + + +G + P +++ I + G ++ D Sbjct: 122 VDISLRGEHEMIRIGDVDFHMIHTPGHTPGSISPFIDTDDGRVLFGQDIH--GPFSPRWG 179 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISE 210 +D E IL+L D G E Sbjct: 180 SDLAKWKE-SMEKILSLNIDVLCEGHAGVYKGE 211 >gi|167759495|ref|ZP_02431622.1| hypothetical protein CLOSCI_01843 [Clostridium scindens ATCC 35704] gi|167663052|gb|EDS07182.1| hypothetical protein CLOSCI_01843 [Clostridium scindens ATCC 35704] Length = 256 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 92/276 (33%), Gaps = 49/276 (17%) Query: 2 KNEELVFLPLGGVGEIGM----NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD 57 K+E++ +G G N A GY + +++DCG GV + Sbjct: 12 KDEKMKITIIGCQ---GAYPDQNQATSGYLIETENVRVLLDCGC--------GVISQIQN 60 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR-------- 109 + + L A+ ITH H DH S L YAS + + K+ Sbjct: 61 YILLEE----LDAVVITHYHPDHC-------SDLGCLQYASMILMQFGKRKKPLAVWGPG 109 Query: 110 VYERVSKKIPC--ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 ER+S + C S+ D +G S + H I V ++V++GD Sbjct: 110 ENERLSYEEYCTGNSYLEEDVFQIGDLVFASQKNVHDILSYAIRVEDRKGSSLVYSGDTG 169 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCD-STNAMREGTCISEKGIKKNIYDIMKNAKG 226 D G +C+ S ++G ++ Sbjct: 170 --------YYEDLSKFAE----GTELFLCECSLYNWQKGKTPGHMCAEETGMAAKNAKAK 217 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLK 262 + +T +R + + ++ + ++VL S + Sbjct: 218 KLCLTHLPPYGNRQQLLEEVGHKYQGELVLASSGMI 253 >gi|52081013|ref|YP_079804.1| hypothetical protein BL01575 [Bacillus licheniformis ATCC 14580] gi|52786390|ref|YP_092219.1| YqgX [Bacillus licheniformis ATCC 14580] gi|52004224|gb|AAU24166.1| conserved protein YqgX [Bacillus licheniformis ATCC 14580] gi|52348892|gb|AAU41526.1| YqgX [Bacillus licheniformis ATCC 14580] Length = 212 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 32/163 (19%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ D G + +I + Sbjct: 6 MPLGPIQ---TNAYILS---NDDGTCLIFDPG---SESGKLNA--------YIKENGLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASP-----FA------IGLLEAKRVYERVSKK 117 +A+ +THAH DH GA+ ++ ++PVY LL + ++ + Sbjct: 49 LAVLLTHAHFDHIGAVDNVRKEWNIPVYVHKNEAEWLTDPSLNGSALLTG----QTITAE 104 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +G F++ + P +++ + Sbjct: 105 KADHLIEEEGDLKIGPFTLRMLFTPGHSPGSVSYYAEEENLIV 147 >gi|325272109|ref|ZP_08138544.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] gi|324102752|gb|EGC00164.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] Length = 252 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --SPAQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G+ + + RV H E + V+ D D +L D Sbjct: 97 --ACGQSLHIGSLQVNAARVEHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|325968394|ref|YP_004244586.1| mRNA 3-end processing factor [Vulcanisaeta moutnovskia 768-28] gi|323707597|gb|ADY01084.1| putative mRNA 3-end processing factor [Vulcanisaeta moutnovskia 768-28] Length = 339 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 26/218 (11%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I + K + A+ ITH H DH + P+ S ++ A+ Sbjct: 23 IDPLRKPSGSFNAVLITHGHRDHV--NPRTLRNVS-PIIMSNETAIIIRARDGE-----N 74 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + I+ G K+ V IES H I +++ V+ + TGD+ ++ +L Sbjct: 75 LRHITISPGSKLAVNNVLIESFNAGHVI-GSLSYVLDFGDLRVGITGDFNVEPSILLD-- 131 Query: 178 TDKDSLCAIGNEG--ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 G +G + L+ ++T + S + + ++++ +V Sbjct: 132 ---------GAKGLDVDILIMEATYGDPDYVFPSRHEVYNELRAVVEDGVKDGVVLLMGQ 182 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI 273 + R + + + + + +V++ A+D+ Sbjct: 183 PLGRGQELTALLKDYPLYVEPS----IKVINNALDLRY 216 >gi|172056914|ref|YP_001813374.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171989435|gb|ACB60357.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 56/187 (29%), Gaps = 26/187 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY K ++ID G +D+ I K + AI +THAH DH G + Sbjct: 15 GYLLFKEGKCLVIDPG----TEDMR-------FFDEIEKRDAKVEAILLTHAHFDHIGGV 63 Query: 85 HDLWSFLHVPVYASP-FAIGLLEAKRVYERVSKKIPCISFQAGD-----KVDVGAFSIES 138 L F P Y P L P A +++G F Sbjct: 64 DMLRRFTSAPAYIHPNETKWLSNPNLNGSIKFNMPPLKVKPAEQLLVSGSLEIGPFQFHV 123 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + P ++ + + GD TD + G++ +L D Sbjct: 124 LETPGHSPGSVTFYFKKEQ--VAFAGDLIFKRSVG---RTDLEG----GDQDVLMRSIDR 174 Query: 199 TNAMREG 205 A Sbjct: 175 VIAEIPH 181 >gi|307823065|ref|ZP_07653295.1| beta-lactamase-like protein [Methylobacter tundripaludum SV96] gi|307735840|gb|EFO06687.1| beta-lactamase-like protein [Methylobacter tundripaludum SV96] Length = 293 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 64/216 (29%), Gaps = 48/216 (22%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN---LMA-IFI 73 G N I++D G I + + + A IFI Sbjct: 23 GGNTTCIEI-RTDDNDLIILDAGTG---------------IHALAQNLLKEMPVQAHIFI 66 Query: 74 THAHEDHYGALHDLWSFL----HVPVYAS--PFAIGLLEAKR-----------VYERVSK 116 TH H DH L H+ +Y P + +++ Sbjct: 67 THTHWDHIQGLPFFIPIFIPNNHIKIYGGIDPVTNETINRALSVQLQYSFFPIREAQLNA 126 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL-------- 168 +I + + G V VG I + ++H + I ++ TGD++ Sbjct: 127 RIEYATVKPGVPVHVGRAVITPIVLSHPVLN-FGYRIDCDGQSVFFTGDYEPQLNIYDPE 185 Query: 169 DDDAILGDVTDKDSLCA--IGNEGILALMCDSTNAM 202 DD+ + + + AL+ DS+ Sbjct: 186 DDEYAEFQSFVDAKWDEVVLAMKDVDALIVDSSYTN 221 >gi|223043180|ref|ZP_03613227.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] gi|222443391|gb|EEE49489.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] Length = 207 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + D + + + K L AI +THAH DH GAL Sbjct: 16 YFIENEESVILID-----PSSES---DKII---KKLNQINKPLKAILLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPC--ISFQAGDKVDVGAFSI 136 D+ S VPVY L+ K + + I S ++ F Sbjct: 65 DIISKYDVPVYMHQEEFDFLQDPEKNGASKFKQYGMPQVISYAKPSKLEEGSKEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + + P ++ V + + D ++L + I L Sbjct: 125 DVLHSPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKIFEL 180 >gi|42518155|ref|NP_964085.1| hypothetical protein LJ0069 [Lactobacillus johnsonii NCC 533] gi|41582439|gb|AAS08051.1| hypothetical protein LJ_0069 [Lactobacillus johnsonii NCC 533] Length = 265 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 28/182 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKVSVLSSGSTG----NSTLIE----TEQHKILMDAGLSGKKTKDLLAQVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKK 117 K++ IFI+H H DH G L L + YA+ L+E+K++ Sbjct: 47 ------KDIDMIFISHDHTDHSGGLGVLMRRYPQISAYANSGTWNYLIESKKI--GNLPV 98 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +F++G G + S +H E V S D + G++ Sbjct: 99 EQINTFESGVTKTFGDLDVTSFATSHDAAEPQYYVFSSGGKRFACLTDTGYVSSNVKGEI 158 Query: 178 TD 179 D Sbjct: 159 KD 160 >gi|227825035|ref|ZP_03989867.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905534|gb|EEH91452.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 262 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 57/173 (32%), Gaps = 30/173 (17%) Query: 1 MKNE-ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT 59 MK ++ L G G N AL G + I+ID G+S + + Sbjct: 1 MKTSFKISVLASGSRG----NAALIQVGPTA----ILIDAGISCRRI-----------VQ 41 Query: 60 FIMKE---RKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVS 115 + + ++L IF+TH H+DH L VP++AS + + R Sbjct: 42 GLKERNLSPRDLGGIFLTHEHKDHIAGLEVFARTYGEVPIFASEKTW----TRLPFRRTM 97 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + VG I+ + H + + I + D Sbjct: 98 NRDQMRVLPRSC--VVGGLRIQPFSIPHDAIDPVGYEIFYNERKCTYLTDCGF 148 >gi|325283829|ref|YP_004256370.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324315638|gb|ADY26753.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 215 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 17/99 (17%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LP G + E N L G +ID P +D G+ L D + + Sbjct: 13 RIWLLPTGPLQE---NCYLVA-GPEHQG--FLID-----PGEDAAGI-LALVDASGV--- 57 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG 103 + AI +TH H DH GA+ + L VPVY P + Sbjct: 58 --QVQAILLTHGHFDHIGAVQAVREALGVPVYLHPGSAA 94 >gi|108563223|ref|YP_627539.1| hypothetical protein HPAG1_0798 [Helicobacter pylori HPAG1] gi|107836996|gb|ABF84865.1| hypothetical protein HPAG1_0798 [Helicobacter pylori HPAG1] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+Y + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLLKTLKDTPIYTPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|56420974|ref|YP_148292.1| hypothetical protein GK2439 [Geobacillus kaustophilus HTA426] gi|56380816|dbj|BAD76724.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 210 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 34/164 (20%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG I N L + R+ +++D G G LV I ++ +AI + Sbjct: 8 VGPIQANAYLLS---SADRQCLIVDPGAE-------GAALV----RRIEEKGLTPLAILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK------------IPCI 121 THAH DH G + D+ + +PVY + K+ + + Sbjct: 54 THAHFDHIGGIPDVLARWDIPVYVHE------KEKQWLQDPALNGSLYFGGPVAVRCEPT 107 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +++G F+++ P +++ NIV +GD Sbjct: 108 CLKGPTVLNIGPFALDVRETPGHSPGSVSYY--CKQANIVFSGD 149 >gi|295703680|ref|YP_003596755.1| metallo-beta-lactamase superfamily [Bacillus megaterium DSM 319] gi|294801339|gb|ADF38405.1| Metallo-beta-lactamase superfamily [Bacillus megaterium DSM 319] Length = 282 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 62/150 (41%), Gaps = 18/150 (12%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 ++++D G+ P ++ + + K AI +THAH DH G++ + Sbjct: 47 NPDKENSFVLVDAGM--PNSAS----MIIKEAEERFGKEKKPKAIILTHAHFDHIGSIIE 100 Query: 87 LWSFLHVPVYASPFAIGLLEAKRV--------YERVSKKIPCISFQAGDKVDVGAFSIES 138 L ++PVYA P + + K+ + K+ + +D+G+ +++ Sbjct: 101 LVEKWNIPVYAHPLELPYVTGKKNYPTPDGTVEGGLVAKLS--PLFPTEAIDLGS-HVQA 157 Query: 139 VRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + S+P I +P + H ++ Sbjct: 158 LPDDGSVPHMPEWEWIHTPGHSPGHISLFR 187 >gi|167646414|ref|YP_001684077.1| beta-lactamase domain-containing protein [Caulobacter sp. K31] gi|167348844|gb|ABZ71579.1| beta-lactamase domain protein [Caulobacter sp. K31] Length = 547 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G G + + A + I+IDCG F L + + F + + + A+ Sbjct: 9 GAAGCVTGSCA----RLQTQEATILIDCG-MFQGSKTLKA-LNYGEFPF---DPRQIDAV 59 Query: 72 FITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 +THAH DH G L L + P+YA+ L ++ Sbjct: 60 LLTHAHVDHCGLLPKLMLAGFEGPIYATAATRDLCAVMLADAGGIQE 106 >gi|325290216|ref|YP_004266397.1| beta-lactamase domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324965617|gb|ADY56396.1| beta-lactamase domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 213 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 20/141 (14%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N L P ++K +++D G G + + +I ++ ++ I +TH H Sbjct: 11 GTNCYLVSC--PETKKALLVDPGA--------GAEGIL---EWISQKNVEVIGILLTHGH 57 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSK----KIPCISFQAGDKVD 130 DH GAL ++ L V VY +L + K + Q D ++ Sbjct: 58 YDHIGALEEVRDALKVKVYIHRDDAPMLADPQKNLSAYGGRNIRVEKGADVLLQENDVLE 117 Query: 131 VGAFSIESVRVNHSIPETMAL 151 +G + + P + L Sbjct: 118 IGQLTYTVLHTPGHTPGCICL 138 >gi|308809045|ref|XP_003081832.1| putative SNM1 (ISS) [Ostreococcus tauri] gi|116060299|emb|CAL55635.1| putative SNM1 (ISS) [Ostreococcus tauri] Length = 374 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 122/353 (34%), Gaps = 41/353 (11%) Query: 49 PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEA 107 PG + + + F+TH H DH+ L +Y + + L+ Sbjct: 17 PGTRFIVDGFEWDLGRGGACETWFLTHFHADHHRG---LTKTFDKGIIYGTKETLELVRM 73 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP----VGNIVHT 163 K + + I A V + + NH P + ++ P ++HT Sbjct: 74 KIQVPALRLRALEIGVPA----RVDGVQVTFIDANH-CPGAVMILFEFPERPDASPVLHT 128 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE---KGIKKNI--Y 218 GD++ A L + A IL L + + E +++ + Sbjct: 129 GDFRF--SARLARDETLVRIAASPKRPILILDTTYCSLEHDAFPTQEYVLNAVREALTHE 186 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 D + A+ L T++ V + + + A +GRK+ + + KR V A+ + +++ Sbjct: 187 DNLDGARKLFLFGTYT--VGKEKVFFEAARTLGRKVYVG--AAKRSVLDALSLTRDEREA 242 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 L D+ L+ +V + +++ + + V FS+ N Sbjct: 243 LTRDDKRTNLH-----VVPMGSTSFSKMASILKYYKSRFDTVVAFRPTGWTFSA-----N 292 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + R + V+ + S H ++L+ ++I P+ + Sbjct: 293 KKTSRASSRRQRGRLVQ-------YGLPYSEHSSLSELRAFIRFINPRSIFPH 338 >gi|15614756|ref|NP_243059.1| hypothetical protein BH2193 [Bacillus halodurans C-125] gi|10174812|dbj|BAB05912.1| BH2193 [Bacillus halodurans C-125] Length = 259 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 14/144 (9%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 + + WI+ID G+ + + + I ++ E AI +TH H DH Sbjct: 16 NIIMIVDSKTSDWILIDTGLFYSEA------FILKKIRRVLGELIPPKAIILTHGHFDHV 69 Query: 82 GAL-HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP---CISFQAGDKVDVGAFSIE 137 GAL L F +VPVYA + L +R Y + +P FS Sbjct: 70 GALRPLLQRFPNVPVYAHELELPFLTGQRHYVKPDPSVPGGLMAKLAWLYPYHAYDFSRI 129 Query: 138 SVRVNHSIPETMALVIRSPVGNIV 161 +P+ L + I Sbjct: 130 ICP----LPDDGTLPFFTDWRWIH 149 >gi|242242817|ref|ZP_04797262.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis W23144] gi|242233718|gb|EES36030.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis W23144] gi|319400883|gb|EFV89102.1| metallo-beta-lactamase superfamily protein [Staphylococcus epidermidis FRI909] gi|329725326|gb|EGG61809.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU144] Length = 207 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + + I + + K L AI +THAH DH GAL Sbjct: 16 YFIENEENVILID-----PSSESQKI------IKKLNQINKPLKAILLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 D+ VPVY S L K +SK + + ++ F Sbjct: 65 DIIEKYQVPVYMSKDEFDFLTDPDKNGSSKFTQYGLSKIESHANPLSLSEGPAEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 + + P +++ V Sbjct: 125 KVLHTPGHSPGSLSFVFNDFA 145 >gi|313497591|gb|ADR58957.1| Beta-lactamase domain-containing protein [Pseudomonas putida BIRD-1] Length = 252 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 30/182 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 + F LG + N L G +I++DCG S + + L GV Sbjct: 1 MRFAVLGSGSQ--GNGTLIASG----DTFILVDCGFSLRETERRLALLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L A+ +TH H DH + L +VPVY S + + Sbjct: 45 --SAAQLSAVLVTHEHADHVHGVGLLSRRYNVPVYLSQGTLRGMRKPVEVAGFL------ 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G + +G+ + + RV H E + V+ D D +L D Sbjct: 97 --ACGQSLRIGSLEVTAARVEHDAYEPLQYVVSDGRRRFGMLTDLGSYDALLLERYQGLD 154 Query: 182 SL 183 +L Sbjct: 155 AL 156 >gi|261839372|gb|ACX99137.1| hypothetical protein HPKB_0537 [Helicobacter pylori 52] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|317182125|dbj|BAJ59909.1| hypothetical protein HPF57_0835 [Helicobacter pylori F57] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|261417697|ref|YP_003251379.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|297529392|ref|YP_003670667.1| beta-lactamase [Geobacillus sp. C56-T3] gi|319767495|ref|YP_004132996.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261374154|gb|ACX76897.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|297252644|gb|ADI26090.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] gi|317112361|gb|ADU94853.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 210 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 34/164 (20%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG I N L + R+ +++D G G LV I ++ +AI + Sbjct: 8 VGPIQANAYLLS---SADRQCLIVDPGAE-------GAALV----RRIEEKGLTPLAILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK------------IPCI 121 THAH DH G + D+ + +PVY + K+ + + Sbjct: 54 THAHFDHIGGIPDVLARWDIPVYVHE------KEKQWLQDPALNGSLYFGGPVAVRCEPT 107 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +++G F+++ P +++ NIV +GD Sbjct: 108 CLKGPTALNIGPFALDVRETPGHSPGSVSYY--CKQANIVFSGD 149 >gi|188527342|ref|YP_001910029.1| hypothetical protein HPSH_02745 [Helicobacter pylori Shi470] gi|217034140|ref|ZP_03439560.1| hypothetical protein HP9810_868g33 [Helicobacter pylori 98-10] gi|188143582|gb|ACD47999.1| hypothetical protein HPSH_02745 [Helicobacter pylori Shi470] gi|216943424|gb|EEC22880.1| hypothetical protein HP9810_868g33 [Helicobacter pylori 98-10] gi|297380012|gb|ADI34899.1| Hypothetical protein HPV225_0828 [Helicobacter pylori v225d] gi|308062133|gb|ADO04021.1| hypothetical protein HPCU_04305 [Helicobacter pylori Cuz20] gi|308063399|gb|ADO05286.1| hypothetical protein HPSAT_02705 [Helicobacter pylori Sat464] gi|315586522|gb|ADU40903.1| metallo-beta-lactamase [Helicobacter pylori 35A] gi|317180576|dbj|BAJ58362.1| hypothetical protein HPF32_0780 [Helicobacter pylori F32] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|317177357|dbj|BAJ55146.1| hypothetical protein HPF16_0549 [Helicobacter pylori F16] Length = 205 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + ++V +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEVENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|224113605|ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1| predicted protein [Populus trichocarpa] Length = 360 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 104/319 (32%), Gaps = 15/319 (4%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS---KKIPCISFQAG 126 A F+TH H DH L W P++ S LL K +S IS G Sbjct: 17 AYFLTHLHTDHTQGLTSKWGK--GPLFCSKLTAKLLPFKFPDFNLSLLRHSFSLISPTTG 74 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 ++ +++ H P + + R G +++TGD++ + D+ L + Sbjct: 75 SQITAHVMALD----THHCPGVVMFLFRGEFGCLMYTGDFQWEVDSKRAKDARSRLLNVL 130 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 NE + L D+T + + + + DI+ + +V + + + +I I Sbjct: 131 KNETVDVLYLDNTYCNPSYDFPTREVAAQQVVDIIASHLEHDIVIGIDT-LGKEELLIHI 189 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + + KI L L+ + +G S P L V R Sbjct: 190 SRVLNIKIWLWLERLQTM----HLLGFHDTFTTKNSLTRVRAVPCYSLSVETLEGLNTMR 245 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + + G +K + D +F S V Sbjct: 246 PTIGIMPSGLPWVLKPVKGDDNLFGSLLTSRY-KKRQPSDKLDGNLAYAERYHQYMFSVP 304 Query: 367 VSGHPYPNDLKRMYQWIRP 385 S H +++ + ++P Sbjct: 305 YSYHLCFAEIQEFIELVQP 323 >gi|284049123|ref|YP_003399462.1| hypothetical protein Acfer_1793 [Acidaminococcus fermentans DSM 20731] gi|283953344|gb|ADB48147.1| conserved hypothetical protein [Acidaminococcus fermentans DSM 20731] Length = 261 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 19/150 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L G + I+ID G+S + + E ++L +F+TH H Sbjct: 17 GNSTLIRAG----QTAILIDAGIS--------CRRIVQGLKRCGLEPEDLSGVFLTHEHR 64 Query: 79 DHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH L VPV+AS L +R + + + ++ G IE Sbjct: 65 DHIAGLDVFARHYDSVPVFASEKTWAQLPVRRQ---LPRPQVRVIPRSCTM---GNLRIE 118 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R+ H + + I + + D Sbjct: 119 PFRIPHDAADPVGYAIFNGDEKCTYLTDCG 148 >gi|270289948|ref|ZP_06196174.1| ribonuclease Z [Pediococcus acidilactici 7_4] gi|304385801|ref|ZP_07368145.1| beta-lactamase superfamily I metal-dependent hydrolase [Pediococcus acidilactici DSM 20284] gi|270281485|gb|EFA27317.1| ribonuclease Z [Pediococcus acidilactici 7_4] gi|304328305|gb|EFL95527.1| beta-lactamase superfamily I metal-dependent hydrolase [Pediococcus acidilactici DSM 20284] Length = 267 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 23/183 (12%) Query: 1 MKNEELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M E L L G G N+ + +++D G+S + G+ + Sbjct: 1 MSEEGLKVSVLSSGSTG----NVTYIE----TPEHKVLVDAGLS--GKKIAGL------M 44 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + ++ + ++F+TH H DH ++ L + VYA+ ++ K Sbjct: 45 ESVGRDIHEVDSLFVTHEHSDHIQSVGVLARKYGINVYANRGTWDAIKNKV---GKIPTE 101 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 F + IES V+H E + V D + D A Sbjct: 102 QKYIFDPNTTKSLDDLDIESFAVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRVAGTIR 161 Query: 177 VTD 179 D Sbjct: 162 NAD 164 >gi|309807957|ref|ZP_07701885.1| hypothetical protein HMPREF9211_0330 [Lactobacillus iners LactinV 01V1-a] gi|308168808|gb|EFO70898.1| hypothetical protein HMPREF9211_0330 [Lactobacillus iners LactinV 01V1-a] Length = 135 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 29/60 (48%) Query: 500 IHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 + + TT+ + ++ D L++ + + L L K G++P+V + ++++ R Sbjct: 1 MMDGASDVIKTTISNNFNHKKFDWTELKQDLHTNLEKFLYKETGRRPVVLPIVMEVNQNR 60 >gi|239818144|ref|YP_002947054.1| beta-lactamase domain protein [Variovorax paradoxus S110] gi|239804721|gb|ACS21788.1| beta-lactamase domain protein [Variovorax paradoxus S110] Length = 267 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 61/271 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGVDLVFPDITFIMKERKN 67 LG G I + + + +++D G +++ G+D V Sbjct: 6 LGCSGAIAKDCRTTSFLIDTD---LLVDAGTGVGDLTLEEMAGIDDV------------- 49 Query: 68 LMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 +TH H DH AL + + V+A I L A + I Sbjct: 50 ----VLTHCHLDHIAALPLMLDAVGGRRTRSLRVHALRATIEALRAHVFNNVIWPDFESI 105 Query: 122 SFQAGDKVDVGAF--------------SIESVRVNHSIPETMALVIRSP-VGNIVHTGDW 166 V IE + H++P V R+ N V TGD Sbjct: 106 PSPEAPFVSFHDIAVGQVLQLGSAAPKRIEVLPAVHTVPACGFAVSRAEGGANWVFTGD- 164 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT------CISEKGIKKNIYDI 220 D + + L+ ++ + RE +S + + + I Sbjct: 165 ----TERNTPFWD-----RLNALDVAMLVIETAFSNREQALAERSLHLSPRALADELAHI 215 Query: 221 MKNAKGCVLVT-TFSSSVSRIRSIIDIAEQI 250 + + +T T + I I+ Sbjct: 216 DPGKQFPIYITHTKPAETEEIMWQIEHLAGH 246 >gi|225856892|ref|YP_002738403.1| VicX protein [Streptococcus pneumoniae P1031] gi|225725120|gb|ACO20972.1| VicX protein [Streptococcus pneumoniae P1031] Length = 269 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 11/157 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + +S+ +++D G+S K + I ++ ++L AI ITH H DH + Sbjct: 19 SFYLETSKNKLLVDAGLSGKKITSLLAE--------INRKPEDLDAILITHEHSDHIHGV 70 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + +YA+ +E Y F+ G G IES V+H Sbjct: 71 GVLARKYGMDLYANEKTWQAMENS-KYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHD 129 Query: 145 IPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D A + + D Sbjct: 130 AVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENAD 166 >gi|74317002|ref|YP_314742.1| cyclic-AMP phosphodiesterase [Thiobacillus denitrificans ATCC 25259] gi|74056497|gb|AAZ96937.1| cAMP phosphodiesterase class-II [Thiobacillus denitrificans ATCC 25259] Length = 254 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 58/177 (32%), Gaps = 35/177 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G IG + I+ID G G+ + D + Sbjct: 1 MKLTVLGCSGGIG---SGRHTTGLLVDDDILIDAGT--------GITTL--DFEQLQA-- 45 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH----VP--VYASPFAIGLLEAKRVYERVSKKIP 119 + +F+THAH DH L L + P V+A P + +L ++ Sbjct: 46 --IDHVFLTHAHLDHVLGLPLLLDSVGDLREAPLIVHALPEVLQVLSDHLFNWQLWPDFR 103 Query: 120 CISFQAGDKVDVGAF-----------SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I + + S + NH +P L + + G IV +GD Sbjct: 104 KIPSEDAPWLRFEPLGFGEVCTVDGRSFRPLPANHVVP-ACGLHVFAEAGGIVFSGD 159 >gi|268318625|ref|YP_003292281.1| hypothetical protein FI9785_126 [Lactobacillus johnsonii FI9785] gi|262397000|emb|CAX66014.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus johnsonii FI9785] Length = 265 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 28/182 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKVSVLSSGSTG----NSTLIE----TEQHKILMDAGLSGKKTKDLLAQVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKK 117 K++ IFI+H H DH G L L + YA+ L+E+K++ Sbjct: 47 ------KDIDMIFISHDHTDHSGGLGVLMRRYPQISAYANSGTWNYLIESKKI--GNLPV 98 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +F++G G + S +H E V S D + G++ Sbjct: 99 EQINTFESGVTKTFGDLDVTSFATSHDAAEPQYYVFSSGGKRFACLTDTGYVSSTVKGEI 158 Query: 178 TD 179 D Sbjct: 159 KD 160 >gi|168187500|ref|ZP_02622135.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] gi|169294607|gb|EDS76740.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] Length = 199 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 23/181 (12%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + G+ +ID G D+ +I + I +TH H Sbjct: 12 GANCYILIDGNEGC----IIDPG---GDADML-----INNIDTFNVH---IKFILLTHGH 56 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER--VSKKIPCISFQAGDKVDVGAFS 135 DH G + +L +VPVY + L+ ++ + + GD + +G Sbjct: 57 MDHTGGVQELKDRYNVPVYINEKDRELMRKHSQVFGPIWNETKEDKTIKDGDVLKLGNLE 116 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGILA 193 I+ + P M+ ++++ +V TGD D L E ++ Sbjct: 117 IKCLETPGHTPGGMSFIVKN----VVFTGDTLFRGSVGRTDFPGGDHSKLIESIKEKLIV 172 Query: 194 L 194 L Sbjct: 173 L 173 >gi|109014448|ref|XP_001110949.1| PREDICTED: DNA cross-link repair 1B protein [Macaca mulatta] Length = 532 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 95/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + I D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIQPLEIGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGRETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + ++ + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLY-NLGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVGHMEICHSNMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I SS + S Sbjct: 246 -----NQTHPTIAILPTSRKIHSSHP--------------------------DIHVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L ++P +V I Sbjct: 275 DHSSYSELCAFVAALKPCQVVPI 297 >gi|208434724|ref|YP_002266390.1| hypothetical protein HPG27_769 [Helicobacter pylori G27] gi|208432653|gb|ACI27524.1| hypothetical protein HPG27_769 [Helicobacter pylori G27] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D V P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFVIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKTLKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|114321460|ref|YP_743143.1| RNA-metabolising metallo-beta-lactamase [Alkalilimnicola ehrlichii MLHE-1] gi|114227854|gb|ABI57653.1| RNA-metabolising metallo-beta-lactamase [Alkalilimnicola ehrlichii MLHE-1] Length = 460 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 112/404 (27%), Gaps = 68/404 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE-----RK 66 GG + + S ++IDCG+ +D P + + Sbjct: 10 GGADGVTGSCHQL---YASPDHSLLIDCGLFQGEDAGP---------DPLAQHTVDFDVD 57 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCI 121 L A+ +TH H DH G L L + P+ S + L ++ Sbjct: 58 TLQALVLTHVHIDHVGRLPYLLAAGYRGPILCSHPSAHLLPLVIDDALRIGFTRDGQLIA 117 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG----------DWKLDDD 171 FQ + + H++ + L ++ + H D + Sbjct: 118 RFQQQVQNQLTPLKYSRW---HTVTDNRHLTLKVRLERAGHILGSAYVKVAIRDKRTGRT 174 Query: 172 AILGDVTDKDS------LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA- 224 D + L+ ++T R ++ + + +++A Sbjct: 175 HRTVFSGDLGAPGSPLLPAPQSPHHADLLVLEATYGDRSHENRDQR--RHRLRQAIEHAV 232 Query: 225 --KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGI--------I 274 G V++ FS + R + ++ E + L+ +V + Sbjct: 233 QDGGTVIIPAFS--IGRTQVLLHELEALTHTAQGPWRHLRIIVDSPLAARFNRVYRRLKP 290 Query: 275 KKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 DQ G +P + S + + + L++G V +A Sbjct: 291 YWDQEARKRARQGRHPLNFSRLHTVDSHAQHQHTVTTLAQGGHPAVVIAASGMC------ 344 Query: 335 IPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 A G + N L G P + + Sbjct: 345 ------AGGRVVNYLKAMLGDPRHHVLFVGYQAEGTPGRDIQRY 382 >gi|288927601|ref|ZP_06421448.1| VicX protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330435|gb|EFC69019.1| VicX protein [Prevotella sp. oral taxon 317 str. F0108] Length = 267 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ LG G G N Y + + ++ID GV G+ + Sbjct: 2 LNFISLG-SGSSG-NC----YYLYTETEGLLIDAGV--------GIRTLKKHFREYGLSL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ + ITH H DH ++ L +P+YA+ +E + Sbjct: 48 AHIQNVLITHDHADHVKSVGSLSRDYGLPIYATHRVHVGIEKNYCVRCKVSPERLKLVEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G +G+F++ V H + + ++ D Sbjct: 108 GVAFRLGSFTVTPFNVPHDSLDNVGYQVQFGDITFCLLTDVG 149 >gi|38637890|ref|NP_942864.1| hypothetical protein PHG226 [Ralstonia eutropha H16] gi|32527228|gb|AAP85978.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 199 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 58/196 (29%), Gaps = 42/196 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG + + Y + R +M+DCG+ F + + + +L Sbjct: 6 LGATDTVTGS----RYVLDTGRDRVMVDCGL-FQGYKTL----RLRNWDPLPVDPASLDG 56 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------------EAKRV 110 + +THAH DH G L L Y + L Sbjct: 57 VVLTHAHLDHSGYLPLLVRNGFRGSAYCTMGTAQLCGILLPDSAHLAAEDAAYANRKGFS 116 Query: 111 YERVSKKIPCISFQAGDKVDVGA------FSI------ESVRVNHSIPETMALVIRSPVG 158 R + + +G F++ E R H I + + + + Sbjct: 117 RHRPTLPPYTSADVEHALRRLGPTHYGQHFTVVPGVEAEFSRAGH-IVGSAIVTLLAQGQ 175 Query: 159 NIVHTGDWKLDDDAIL 174 IV +GD D ++ Sbjct: 176 RIVFSGDLGRQHDLVM 191 >gi|167625216|ref|YP_001675510.1| RNA-metabolising metallo-beta-lactamase [Shewanella halifaxensis HAW-EB4] gi|167355238|gb|ABZ77851.1| RNA-metabolising metallo-beta-lactamase [Shewanella halifaxensis HAW-EB4] Length = 489 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 98/346 (28%), Gaps = 71/346 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + +++DCG+ V + + A Sbjct: 8 LGATQEVTGSCHLL----NIDGQQVLLDCGLIQGSKAD-----VLRNHEPFAFSPSQIHA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P+Y+ + L +R++KK Sbjct: 59 VVLSHAHIDHSGRLPLLVRSGFTGPIYSHKATVELCAVMLKDAAMLQARDIDRLNKKRVK 118 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIRSPV 157 + + + ++ H I + + + Sbjct: 119 NDLPLLEPLFDDADVDRVMQQFVALDYGESTQVIPHLNVCLSDAGH-ILGSAVVELWLGE 177 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKK 215 G + D + D SL ++ +ST R ++ + +K Sbjct: 178 GTSTKKLVFSGDLGREGMPILDDPSLIDTA----DLVLMESTYGNRLHRSWNDTLEELKS 233 Query: 216 NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIK 275 + ++G +L+ FS V R + ++ + Sbjct: 234 IFARTIDQSRGNILLPAFS--VGRAQELLYLFHLY--------------------AKEWD 271 Query: 276 KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVK 321 + + +S Q+ V E +LS G+ + Sbjct: 272 LSRWRVCLDSPMAIRATQIYVENYALMDEDFKRFTRLSPGKHPLLS 317 >gi|147678168|ref|YP_001212383.1| exonuclease [Pelotomaculum thermopropionicum SI] gi|146274265|dbj|BAF60014.1| predicted exonuclease [Pelotomaculum thermopropionicum SI] Length = 516 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 74/497 (14%), Positives = 133/497 (26%), Gaps = 103/497 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGV----SFPKDDLPGVDLVFPDITFIMKERK 66 LG G + + L G +MIDCG+ ++ G LV P + Sbjct: 6 LGAAGTVTGSCFLLDAG----NTRLMIDCGMFQGPKEVRERNYGRFLVPP---------R 52 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------------- 105 ++ I +THAH DH G + + ++A+ + L Sbjct: 53 SVDYILLTHAHIDHSGLIPKIIRHGFKGRIFATAPTVELCAVLLPDSGHIQEMEVERKNR 112 Query: 106 EAKRVYERVSKKIPCISFQAGDKVDVGA------------FSIESVRVNHSIPETMALVI 153 + +R + + I + + H I + + + Sbjct: 113 KNRRAGRPLIEPIYTVDEAYESLAYFRPVGYDEVIQIAPGIRARFLDAGH-ILGSAMIEL 171 Query: 154 RS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TCI 208 + IV +GD D I+ D +D ++ +ST R C Sbjct: 172 WAAEGGREVKIVFSGDIGNRDRPIIKDPSDIAE--------ADYVVMESTYGARLHEHCE 223 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI---------------------- 246 E + G +++ F+ V R + ++ Sbjct: 224 KEVELLHAAIWETYRKGGNLIIPAFA--VERTQDLLYHLGILMETKRMPPMTVYIDSPLA 281 Query: 247 ---AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS-- 301 + + V+ D + + S E +I + S Sbjct: 282 AAATAVFHKHREVFDREASEVIKKGGDPLYLPGVKFTQSTEESRALNNIDRAIIISTSGM 341 Query: 302 --QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G R L V R I E + + + + + Sbjct: 342 CEAGRIRHHLKYNLWRPESTVLFVGYQPQGTLGRQILDGEKTVRIFGDEIAVKADIRSID 401 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACVPPVR 417 S H L + I+ PQ + +HGEP L V Sbjct: 402 C------YSAHADQVGLVNWVKKIKKPPQEVFVVHGEPESAEVLAGLLRSGLGLKVTVPA 455 Query: 418 NGKMLRLFPDPIEIIDE 434 + + L P E +E Sbjct: 456 WQQSVELLPPEAEKREE 472 >gi|317178827|dbj|BAJ56615.1| hypothetical protein HPF30_0518 [Helicobacter pylori F30] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKEDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPSFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|294792186|ref|ZP_06757334.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] gi|294457416|gb|EFG25778.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] Length = 268 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 25/169 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N + I+ D G+S +D+ + IF++ Sbjct: 18 GNCTVI----KKGNSVILHDVGISCRRIVNGLKELHIDM------------AQVEGIFVS 61 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L L +PVY ++ K + K I + +G Sbjct: 62 HEHSDHIAGLQQLLKRFDLPVYTKQGTWREIQDKL----IVPKNRLIELT-KGSLTLGGL 116 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 ++E V+H + + + + + D + D IL + D L Sbjct: 117 TVEPFSVSHDAADPIGINVFAGNDKATVVTDTGVISDDILRRLDDTTLL 165 >gi|320529012|ref|ZP_08030104.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] gi|320138642|gb|EFW30532.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] Length = 251 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 23/141 (16%) Query: 28 SPSSRKWIMIDCGVSFP----KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 +++D G+S D GVDL +++ A+ +TH H DH Sbjct: 17 VELDGTRLLVDAGISAARIKKGLDRHGVDL------------QSIDAVLVTHEHIDHVRG 64 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L L +P+ A+ + ++ + + ++ +G ++ +H Sbjct: 65 LKTLSKQYRLPILATHGTLENIDG---GAAFADDMHIVTGD----FSIGEVRVQPFATSH 117 Query: 144 SIPETMALVIRSPVGNIVHTG 164 + I + T Sbjct: 118 DAADPCGFRIEGSSCFTLATD 138 >gi|207092306|ref|ZP_03240093.1| hypothetical protein HpylHP_04946 [Helicobacter pylori HPKX_438_AG0C1] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKTLKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|288553364|ref|YP_003425299.1| metallo beta-lactamase [Bacillus pseudofirmus OF4] gi|288544524|gb|ADC48407.1| metallo beta-lactamase [Bacillus pseudofirmus OF4] Length = 211 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 29/211 (13%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ ++ D G + P+ I ++ ++ + Sbjct: 6 IPLGPLQ---TNAYVL---MNEKKEAVIFDPGGNGPE-----------FIKWLNDQQISP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL--EAKRVYERVSKKIPCISFQAG 126 +AI +THAH DH GA+ ++ + PVY L AK R + A Sbjct: 49 IAILLTHAHFDHIGAVDEVREAFNCPVYIHEAEKDWLSDAAKNGSGRFLGNASITACAAD 108 Query: 127 DK------VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVT 178 + + +G+FS + + P +++ S +V +GD Sbjct: 109 EIIQEEKTIQLGSFSFDILYTPGHSPGSVSYY--SATEGVVFSGDALFKQSIGRTDLPGG 166 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 D + L + +L L ++ A G + Sbjct: 167 DHNLLLKSIHSKLLELPEETIVASGHGPVTT 197 >gi|217032503|ref|ZP_03437994.1| hypothetical protein HPB128_180g2 [Helicobacter pylori B128] gi|298736516|ref|YP_003729042.1| hypothetical protein HPB8_1021 [Helicobacter pylori B8] gi|216945781|gb|EEC24404.1| hypothetical protein HPB128_180g2 [Helicobacter pylori B128] gi|298355706|emb|CBI66578.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|221482308|gb|EEE20663.1| RNA-metabolising metallo-beta-lactamase domain-containing protein, putative [Toxoplasma gondii GT1] Length = 1090 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 17/106 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV--FPDITFIMK 63 L LG ++G + G R+ ++ DCG G+ FP + Sbjct: 75 LHITVLGAGQDVGRSAVYVRLG----RRCVLFDCGC------HLGMKDARRFPLFDKLAP 124 Query: 64 ER---KNLMAIFITHAHEDHYGALHDLWS--FLHVPVYASPFAIGL 104 + A ++H H DH GAL L PV + L Sbjct: 125 RGILTHAVDACVVSHFHLDHCGALPTLTEFLQYRGPVLMTFPTKAL 170 >gi|238027988|ref|YP_002912219.1| hypothetical protein bglu_1g24370 [Burkholderia glumae BGR1] gi|237877182|gb|ACR29515.1| Hypothetical protein bglu_1g24370 [Burkholderia glumae BGR1] Length = 257 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 16/160 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + S ++ +++DCG S + +D T + Sbjct: 1 MRFTSLGSGSE--GNALVVEAASGTTTTRVLLDCGFSAKE-----IDRRL---TRVGLAS 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI ITH H DH G+ L +P++ S + A + I Sbjct: 51 DELDAILITHEHSDHIGSALTLARRFGLPLFMSWGTARAVGA------DAAGIDLHVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +G +I V H E + V + D Sbjct: 105 DEATPIGDLAIHPYTVPHDAREPLQFVFTDGAARLGVLTD 144 >gi|92114931|ref|YP_574859.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] gi|91798021|gb|ABE60160.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] Length = 263 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 29/164 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD----LPGVDLVFPDITFI 61 L F LG G G N L G +++DCG + + G+ Sbjct: 11 LRFASLG-SGSKG-NATLVSDGETH----VLVDCGFGLRETERRLAQFGL---------- 54 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + L AI +TH H DH + L +PVY + L + + + Sbjct: 55 --HPRQLDAILLTHEHGDHIRGVGPLARRYAMPVYLTAGTW--LSGRLGE---VPRHEWV 107 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + I+ V V H E + R+ ++ D Sbjct: 108 V--PQSRFAIKGLDIDPVTVPHDAREPVQFRFRAHDRHLGVLTD 149 >gi|317012624|gb|ADU83232.1| putative hydrolase [Helicobacter pylori Lithuania75] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|119505653|ref|ZP_01627723.1| beta-lactamase-like protein [marine gamma proteobacterium HTCC2080] gi|119458465|gb|EAW39570.1| beta-lactamase-like protein [marine gamma proteobacterium HTCC2080] Length = 266 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG + N L G +++DCG FP+ + Sbjct: 1 MRFASLGSGSQ--GNGTLVSDG----ETLVLVDCG--FPRRETERRLERL------NVAA 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ AI +TH H DH G + PVY + R+S + A Sbjct: 47 EDIDAIIVTHEHGDHSGGVASFSRHYKTPVYLTHGTAN-------SGRLSGVFQQVLINA 99 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 GD +G+ +V V H E + + + + D Sbjct: 100 GDDFTIGSVHALAVPVPHDAREPVQFKLEASGNTLGLLTD 139 >gi|116493521|ref|YP_805256.1| beta-lactamase superfamily hydrolase [Pediococcus pentosaceus ATCC 25745] gi|116103671|gb|ABJ68814.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Pediococcus pentosaceus ATCC 25745] Length = 267 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 25/184 (13%) Query: 1 MKNE--ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPD 57 M + ++ L G G N+ + + +++D G+S + G+ D V D Sbjct: 1 MSEDGLKVSVLASGSTG----NVTYIE----TPERKVLVDAGLS--GKKIAGLMDSVGRD 50 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I+ + ++F+TH H DH ++ L + +YA+ + K Sbjct: 51 IS-------EVDSLFVTHEHSDHIQSVGVLARKYGIDIYANQGTWDAIGGKI---GKVPT 100 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILG 175 F + IES V+H E + V D + D A Sbjct: 101 EQKFIFDPNTTKSLDDLDIESFSVSHDAAEPQFYEFHHAGKSFVILTDTGYVSDRIAGTI 160 Query: 176 DVTD 179 D Sbjct: 161 RNAD 164 >gi|254443838|ref|ZP_05057314.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium DG1235] gi|198258146|gb|EDY82454.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium DG1235] Length = 765 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 101/350 (28%), Gaps = 72/350 (20%) Query: 53 LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 L P + + + RK + F++HAH DH G + SP L+ + Sbjct: 11 LYLPQLDWHLDARKPVARSFVSHAHFDHMG------KHEE--ILCSPPTAQLIR-----Q 57 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 R+ + G+ ++ + + I + L + + ++TGD+KL Sbjct: 58 RIPGDRKWSIHEFGEPFELEPGTKACLYPAGHIVGSSMLWLEKDGESFLYTGDFKLTPGI 117 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 + L+ ++T + T E + +I + Sbjct: 118 SAEPC---------QPVQVDTLIIETTYGLPRYTFPPENEVYADIIRFCRE--------- 159 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 + G VL G SL + S+ + Sbjct: 160 --------------TLENGDTPVLFGYSLGKSQSILRSL------------------TDA 187 Query: 293 QLIVIATGSQGEPRSALAQLSRG--EMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN--- 347 +L V+ + + + A+L + + S N + IKN Sbjct: 188 KLEVMLHPTALKLTQSCAKLGWTFPSHLPFNERDHQGKVVISPPFQKNAPFLQRIKNPKT 247 Query: 348 ----RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + +S H DL+ + P+ + +HG Sbjct: 248 AIISGWAIDPSSTYRYQTDKAFPLSDHADYLDLQSFVAKVAPKTIYTVHG 297 >gi|317011030|gb|ADU84777.1| hypothetical protein HPSA_03925 [Helicobacter pylori SouthAfrica7] Length = 205 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHY--GA-LHDLWSFLHVPVYASPFAI 102 GVD + P + ++++ KN AI ITH H DH GA L + + P+YA + Sbjct: 23 GVDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDGAQLSKILK--NTPIYAPKDDV 80 Query: 103 GLLEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +LE + + + +++ +I+ P + I Sbjct: 81 FMLENDIFHLGMPVFSPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG---- 136 Query: 160 IVHTGDWKLDDD--AILGDVTDKDSLCA 185 ++ +GD+ +++ + Sbjct: 137 VIFSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|167586778|ref|ZP_02379166.1| beta-lactamase domain protein [Burkholderia ubonensis Bu] Length = 258 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 54/168 (32%), Gaps = 28/168 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + G+D Sbjct: 1 MRFASLGSGSE--GNALVVEAASGATTTRVLLDCGFSAKEVERRLGRLHLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI ITH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVE 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + ++ V H E + V + D Sbjct: 99 LHVLWGDETARIRDLAVLPYTVPHDAREPLQFVFMDGCHRLGVLTDVG 146 >gi|269798322|ref|YP_003312222.1| beta-lactamase [Veillonella parvula DSM 2008] gi|269094951|gb|ACZ24942.1| beta-lactamase domain protein [Veillonella parvula DSM 2008] Length = 268 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 25/169 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N + I+ D G+S +D+ + IF++ Sbjct: 18 GNCTVI----KKGNSVILHDVGISCRRIVNGLKELHIDM------------AQVEGIFVS 61 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH L L +PVY ++ K + K I + +G+ Sbjct: 62 HEHSDHIAGLQQLLKRFDIPVYTKQGTWREIQDKL----IVPKNRLIELT-KGSLTLGSL 116 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 +E V+H + + + + + D + D IL + D L Sbjct: 117 IVEPFSVSHDAADPIGINVFAGNNKATIVTDTGVISDNILRRIDDTTLL 165 >gi|113968883|ref|YP_732676.1| RNA-metabolizing metallo-beta-lactamase [Shewanella sp. MR-4] gi|114048980|ref|YP_739530.1| RNA-metabolising metallo-beta-lactamase [Shewanella sp. MR-7] gi|113883567|gb|ABI37619.1| RNA-metabolizing metallo-beta-lactamase [Shewanella sp. MR-4] gi|113890422|gb|ABI44473.1| RNA-metabolising metallo-beta-lactamase [Shewanella sp. MR-7] Length = 480 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 68/449 (15%), Positives = 138/449 (30%), Gaps = 83/449 (18%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK--DDLPGVDLVFPDITFIMKERKNL 68 LG E+ + L +++DCG+ D+L + D + Sbjct: 8 LGATEEVTGSCHLLTIAGQQ----MLLDCGLIQGGKADELRNHERFSFDPQA-------I 56 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKI 118 A+ ++HAH DH G L L P+Y L ER +KK Sbjct: 57 SAVVLSHAHIDHSGRLPLLVKAGYTGPIYTHKATAELCAIMLKDAAMLQVRDTERNNKKR 116 Query: 119 PCISFQAGDKVD---------VGAFSIESVRVNHSIPETMAL-----VIRSPVGNIVHTG 164 + + + ++E +V IP I + G Sbjct: 117 AKHELEPLEPLFTVEDAEQAVTQFVALEYGQVTQVIPHVDICLSDAGHILGSALVELWLG 176 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNEGI----LALMCDSTNAMREGTCISE--KGIKKNIY 218 + K + + + + N + ++ +ST R ++ +K Sbjct: 177 EGKAQKKLVFSGDLGRAGMPILRNPTLVDTADLVLMESTYGDRFHRSWTDTLAELKAIFA 236 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------IVLLGSSLKRVVSVAID 270 + ++G +L+ FS V R + ++ + + + +++ + Sbjct: 237 KAVTESRGNILLPAFS--VGRAQELLYLFHLYAKDWDLSRWKVCLDSPMAIEATRVYVNN 294 Query: 271 VGIIKKDQLFLSDESFGLYP-REQLIVIATGSQGEPRSALAQ---------LSRG----- 315 ++ D + + G +P + I T + + + Q + G Sbjct: 295 YPLMDDDFKRFTRQHPGQHPLLSNVEFIQTTEESIALNDVHQGLIIIAGSGMCNGGRIRS 354 Query: 316 --EMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----S 368 E + + + PG + + E + + +H S Sbjct: 355 HLEHNLWRPECDVIICGYQALGTPG-----RALVDGAEELTIHGNSIKVAATLHTVGGLS 409 Query: 369 GHPYPNDLKRMYQWI--RPQVLVAIHGEP 395 H +L R Y+ +P LV +HGEP Sbjct: 410 AHADQAELLRWYRHFEDQPP-LVLVHGEP 437 >gi|290968985|ref|ZP_06560520.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290780941|gb|EFD93534.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 313 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 18/147 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N A G I+ID G+ V+ ++ A+F+TH H+ Sbjct: 57 GNCAYIRCG----NTRILIDAGI-----SCRRVETGLRRYG---CTLADIDAVFLTHEHQ 104 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L L +PVY + + V + + VG I Sbjct: 105 DHVSGLRTLLKKSQMPVYTTRETWQAIGNAVVGHQNRF------MPVMRRTQVGEMQIVP 158 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 ++H + + + D Sbjct: 159 FAISHDAARPVGYSVYHEQVKVTLATD 185 >gi|291545649|emb|CBL18757.1| Zn-dependent hydrolases, including glyoxylases [Ruminococcus sp. SR1/5] Length = 209 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 26/160 (16%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G++ N + + + +++D G D + + + I + Sbjct: 11 LGQVFTNCYFL--KNKETGELLIVDPG-----------DYAEKVFQKVSLMQGKPVGILL 57 Query: 74 THAHEDHYGALHDLWSFLHVPVYASP--------FAIGLLEAKRVYERVSKKIPCISFQA 125 TH H DH A+ ++ +PVYA I + + + Sbjct: 58 THGHFDHIMAVKEVKEKYQIPVYACRQEEAMLAEPTINMTAVYGSACSIKPD---VLLDD 114 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G + FSI+ + I+ ++ +GD Sbjct: 115 GQIFEAAGFSIQMFHTPGHTKGSCCYYIKDEG--VLFSGD 152 >gi|291549195|emb|CBL25457.1| Zn-dependent hydrolases, including glyoxylases [Ruminococcus torques L2-14] Length = 206 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 24/158 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E +V +G IG N + + +++ +D P++ + + Sbjct: 1 MKVESIV------LGSIGTNCYIV--TNEETKECFAVDM-AECPQE----------YVNY 41 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY--ERVSKKI 118 I + A+F+TH H DH + D VPVYA + ++E R+ K Sbjct: 42 IKNNGLEMKALFLTHGHFDHIMGIDDFLKAFPVPVYAGEDELPVIEDDRLNVSCMYGPKY 101 Query: 119 PCISFQAG---DKVDVGAFSIESVRVNHSIPETMALVI 153 Q ++ ++ + + Sbjct: 102 AFHGAQPVRDGQVIECAGIEVDVLHTPGHTVGGCCYYL 139 >gi|290968826|ref|ZP_06560363.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290781122|gb|EFD93713.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 213 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 21/145 (14%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITF----IMKERKNL----MAIFITHAHEDHYGALHD 86 +M +C + + + + + + D ++ I + L I +TH H DH GAL D Sbjct: 13 VMTNCYIVYDTETM---EAMVIDPSWSCETIAANLQRLGVTLKRIVLTHGHADHIGALQD 69 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDVGAFSIESVR 140 L VPVY L+ R + + P + GD + VG + + Sbjct: 70 LRQQYQVPVYVGAGDKDLITNSRNNMSLFVGKEIVCDSPDYIAEDGDIIAVGKLQFKVIT 129 Query: 141 VNHSIPETMALVIRSPVGNIVHTGD 165 P + L + +GD Sbjct: 130 TPGHTPGGICLY----GSRTLFSGD 150 >gi|16079535|ref|NP_390359.1| metal-binding hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|221310403|ref|ZP_03592250.1| hypothetical protein Bsubs1_13581 [Bacillus subtilis subsp. subtilis str. 168] gi|221314726|ref|ZP_03596531.1| hypothetical protein BsubsN3_13497 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319649|ref|ZP_03600943.1| hypothetical protein BsubsJ_13418 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323926|ref|ZP_03605220.1| hypothetical protein BsubsS_13552 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731031|sp|P54501|YQGX_BACSU RecName: Full=Uncharacterized protein yqgX gi|1303871|dbj|BAA12527.1| YqgX [Bacillus subtilis] gi|2634913|emb|CAB14410.1| putative metal-binding hydrolase [Bacillus subtilis subsp. subtilis str. 168] Length = 211 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 18/142 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y S + ++ D P + ++ +I ++ +AI +THAH DH GAL Sbjct: 16 YFLISDDQCLIFD-----PGGEGHKIN------QYIKEKGLTPLAILLTHAHFDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIG-LLEAKRVYERVSK------KIPCISFQAGDKVDVGAFSIES 138 ++ +PVY L +A + + K + ++++G F +E+ Sbjct: 65 EVREKWDIPVYLHQNEKNWLADASLNGSGMLRGIEVTAKPADHLIEGDGELNIGPFHLET 124 Query: 139 VRVNHSIPETMALVIRSPVGNI 160 + P +++ ++ I Sbjct: 125 LFTPGHSPGSVSYYVKDADLVI 146 >gi|260886446|ref|ZP_05897709.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|260863828|gb|EEX78328.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] Length = 520 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 64/505 (12%), Positives = 136/505 (26%), Gaps = 89/505 (17%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 S + +++DCG F G + + L + +THAH DH G + L+ Sbjct: 3 ESEERKVLVDCG-MFQG----GRRIRELNYKEFCFNPAELDCVILTHAHIDHCGLVPKLY 57 Query: 89 SF-LHVPVYASPFAIGLLEAKR-------------------------------VYERVSK 116 VYA+ L + + + Sbjct: 58 KEGFKGAVYATKVTCELAHIMLPDSAHIQEHDSEVLNRKIQRSGDTLIRPLYAMEDAEAS 117 Query: 117 KIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + + V + H I + + + + D Sbjct: 118 LKHFVPKSYNELFRVENNIEVRFRDAGH-IIGSAIVEMYVEENGKKTKLVFSGDLGQPDQ 176 Query: 176 DVT-DKDSLCAIGNEGILALMCDSTNAMREG-TCISEKGIKKNIYDIMKNAKGCVLVTTF 233 + D + EG L+ +ST R E + + + D M+ G +++ F Sbjct: 177 PIIKDPTII-----EGADYLLLESTYGDRLHQFYDKETALLEAVQDTMERG-GNLIIPAF 230 Query: 234 SSSVSRIRSIIDIAEQ---------------IGRKIVLLGSSLKRV---------VSVAI 269 + V R ++++ + I ++ + + Sbjct: 231 A--VGRTQTLLYYFYKLWKEGRMEDVPIILDSPMAIAATRVFMENMQEFDETTVELLAKH 288 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 G+ + L + + + A + ++ N+ + T++ Sbjct: 289 GGGLPQMPHLRICETAEESRALNSQASSAVIISASGMADAGRILHHLKHNLW-RPESTIL 347 Query: 330 FSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPNDLKRMYQWI-- 383 F G + + + V + + S H N + I Sbjct: 348 FVGYQAEG--SLGRRLIDGVKRVKVMGEEIAVKANIQMLEGFSAHADMNQILDWLAPIQE 405 Query: 384 -RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIE----IIDEVVHG 438 P + +HGEP + E + G + + E + EV Sbjct: 406 PNPARVFVVHGEPSASESLAEQIEKRFKLKTYIPFFGDSIVMTGREHEIHESHLPEVSVE 465 Query: 439 LFLKDGFLIGKFADLGIAKRRQLSF 463 ++D + +RR+L Sbjct: 466 KEMEDF--LRTVDSTYRQQRRRLLQ 488 >gi|296535548|ref|ZP_06897730.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] gi|296264134|gb|EFH10577.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 33/155 (21%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHA 76 + L + +++D G PD+ + + A+ +TH Sbjct: 27 RSSILIE---DGDGRRLLVDAG---------------PDLRRQLLANRIGRVDALLVTHG 68 Query: 77 HEDHYGALHDLWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 H DH L + +PVYA+P + L+ + Y P A + V Sbjct: 69 HADHIMGLDEFRPLNRALGAAIPVYATPETLAELKRRFDYIFREPTPPVFYRPALTPIAV 128 Query: 132 G--------AFSIESVRVNHSIPETMALVIRSPVG 158 G ++ R +H + ET+ L I Sbjct: 129 GMQDRIEPAGLPVQLFRQDHKVMETLGLRIGRFAY 163 >gi|225420463|ref|ZP_03762766.1| hypothetical protein CLOSTASPAR_06808 [Clostridium asparagiforme DSM 15981] gi|225040894|gb|EEG51140.1| hypothetical protein CLOSTASPAR_06808 [Clostridium asparagiforme DSM 15981] Length = 101 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 12/90 (13%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G S + I++D G+S + D+ + ++ I ITH H Sbjct: 20 GNCIYIG----SDKTHILVDAGISNKRIQQGLNDIGL--------KGGDVDGILITHEHS 67 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 DH L L VP+YA+ + + +K Sbjct: 68 DHIKGLGVLARKYQVPIYATRETLDEIRSK 97 >gi|326520423|dbj|BAK07470.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 434 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 16/156 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y + L++ + + Sbjct: 191 AYFLSHFHNDHYGGLTKKW--CHGPIYCTAITARLVKMLLS----IDSAYVCPLELDTEY 244 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + + + NH P + R S +HTGD++ L + + Sbjct: 245 VIDGVKVTFLEANH-CPGAALIHFRLSDGKTYLHTGDFRASKSMQLHPLLQTGRIS---- 299 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 L D+T + ++ + + + Sbjct: 300 ----LLYLDTTYCNPKYKFPPQEDVIDFVVRTAQRY 331 >gi|288799940|ref|ZP_06405399.1| VicX protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333188|gb|EFC71667.1| VicX protein [Prevotella sp. oral taxon 299 str. F0039] Length = 267 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 13/185 (7%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N Y + + ++ID GV GV + + + I Sbjct: 8 GSGSSG-NC----YFLYTENEGLLIDAGV--------GVRTIKKYFREYGLKLSQINNIL 54 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH A+ L V+++ + + + + G +G Sbjct: 55 ITHDHADHVKAVGALSIETGAKVWSTKPVHIGIMKNFCVRKKVPEDNISIIETGSMFSIG 114 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 +F I+S V H + +++ ++ D I V + + L N I Sbjct: 115 SFDIQSCHVPHDSMDNNGYLVKYENISLGLITDIGSITQDIAHIVANVNYLVVEANHDIN 174 Query: 193 ALMCD 197 L+ Sbjct: 175 LLLSG 179 >gi|226229328|ref|YP_002763434.1| hypothetical protein GAU_3922 [Gemmatimonas aurantiaca T-27] gi|226092519|dbj|BAH40964.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 465 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 49/269 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIMKERKNL 68 G E+ + + G + +++DCG+ + + L P + Sbjct: 7 GAAQEVTGSCHILRVG----NRTVLLDCGMFQGKRSESRAKNMQLPLP--------VDEI 54 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKRVYERVSKK 117 AI ++HAH DH G L L + ++A+ L ++ K + Sbjct: 55 DAIVLSHAHIDHAGRLPYLVAQGYKNNIWATSATRDLCAIMLADSAHIQEKDAEFLARHR 114 Query: 118 IPCIS-----------------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + DV I + ++ + G+ Sbjct: 115 DEIVEPMYRVEDATRTLERMIGMPYHKWFDVTDGVRAMYTDAGHILGSASVTLELREGDT 174 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYD 219 + D + G ++C+ST R+ + + + Sbjct: 175 FRRLVFSGDIGRSGLAII---RDPQPPTTGADVIICESTYGNRDHESVDGAREQLARVVR 231 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 G V++ +F+ V R + ++ Sbjct: 232 ETAARGGRVIIPSFA--VGRTQELVYDLH 258 >gi|85717665|ref|ZP_01048603.1| metallo-beta-lactamase family protein [Nitrobacter sp. Nb-311A] gi|85695521|gb|EAQ33441.1| metallo-beta-lactamase family protein [Nitrobacter sp. Nb-311A] Length = 294 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 19/227 (8%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G EIG S +++D G D G + ++ Sbjct: 8 GTKEIGGTC----IELMSDGARLLLDLGWPLDGDPDDLGAHSAIERLEGGGDLLGLVL-- 61 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDKVD 130 +H H DH+G + +PV + +L+A + + F +G + Sbjct: 62 --SHGHVDHWGLAP--LAGPDLPVALGSATLQILQAAAPFVPRPYVPARPVEFTSGTALQ 117 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 G F + V+HS + A+ + + + ++GD + + L + Sbjct: 118 FGPFRVTPHLVDHSAYDAHAIEVEAGGKRLFYSGDIR----GHGRKAGLFEKLVSHPPND 173 Query: 191 ILALMCDSTNAMREGT---CISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + ++ + ++ R +E +++ + ++ KG LV Sbjct: 174 VDVMLMEGSSFGRLDPDLAFPTETEVEQRLVELFGEIKGLALVAAPE 220 >gi|317014222|gb|ADU81658.1| putative hydrolase [Helicobacter pylori Gambia94/24] Length = 205 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPSFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|284037313|ref|YP_003387243.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283816606|gb|ADB38444.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 322 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 51/150 (34%), Gaps = 26/150 (17%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL-------MAIFITHAHEDHYGAL 84 W+++D G + I K + L AI +TH H DH G+L Sbjct: 45 NHWVLVDAGFM-------------GYASSIKKRAEELFGPGTQPDAIILTHGHADHVGSL 91 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK-VDVGAF----SIESV 139 L +VPVYA + L+ K Y I +G I+++ Sbjct: 92 KTLLEGWNVPVYAHKLELPFLQGKSSYPPPDPAIGGGGMSYMSWVFPIGPMDFGDQIKAL 151 Query: 140 RVNHSIPE-TMALVIRSPVGNIVHTGDWKL 168 + IPE I +P H ++ Sbjct: 152 PDDGKIPELPDWRAIHTPGHAPGHISLFRD 181 >gi|63054513|ref|NP_593231.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe 972h-] gi|19862928|sp|Q10264|PSO2_SCHPO RecName: Full=DNA cross-link repair protein pso2/snm1 gi|159883918|emb|CAA93588.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe] Length = 560 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 23/207 (11%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A F++H H DHYG L W P+Y S L + + + Sbjct: 206 DGVEAYFLSHFHSDHYGGLTPKWKH--GPIYCSEVTGNL----LINVMHVDEQYVKRLKL 259 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKD 181 ++ ++ + NH P + V + N ++H GD++ D ++ V Sbjct: 260 NQPYNIMGITVYVLDANH-CPGSAMFVFETLQSNQTRRVLHCGDFRASKDHVMHPV---- 314 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD----IMKNAKGCVLVTTFSSSV 237 L + D+T + T + + + D I K+ +LV + S+ Sbjct: 315 -LREKTIHKVYL---DTTYLNPKYTFPPQADVVQACADKAISIKKSTDSRLLVVVSTYSI 370 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRV 264 + + + IA+ + +I ++ + + Sbjct: 371 GKEKVAVAIAKSLSSRIYVVPRKMHII 397 >gi|150016498|ref|YP_001308752.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902963|gb|ABR33796.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 235 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 17/142 (11%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + + ++++CG++F + G+D + ITH H+DH A+ Sbjct: 13 SYIIQAEEEILLLECGINFKEIKQ-GLDFDL----------SKVKGCLITHEHKDHSKAI 61 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 D+ + + +Y S + ER S + + + + G F+I V H Sbjct: 62 KDVLAA-GIDIYMSKGTAAGI--NLEDERYSYRFNYLRHKIPKHI--GGFTIIPFSVEHD 116 Query: 145 IPETMALVIRSPVG-NIVHTGD 165 + E + +I P IV D Sbjct: 117 VNEPLGFLIYHPKIGKIVFATD 138 >gi|254785537|ref|YP_003072966.1| chorismate mutase, gamma, beta and epsilon [Teredinibacter turnerae T7901] gi|237686514|gb|ACR13778.1| chorismate mutase, gamma, beta and epsilon [Teredinibacter turnerae T7901] Length = 465 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Query: 1 MKNEEL------VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLV 54 MK ++L F G + + + Y + S +IDCG+ F ++ G D Sbjct: 1 MKTQKLVKHPYPKFEHHGALSGVTGSCH--RYIASPSNH-FLIDCGL-FQGEEGAGGDGS 56 Query: 55 FPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 +I F + + + +TH H DH G + L + P+Y S + LL Sbjct: 57 QHEIDF---DISQVRGLIVTHVHIDHVGRIPYLLAAGFSGPIYTSIPSARLL 105 >gi|91789032|ref|YP_549984.1| beta-lactamase-like protein [Polaromonas sp. JS666] gi|91698257|gb|ABE45086.1| beta-lactamase-like protein [Polaromonas sp. JS666] Length = 262 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N L + ++IDCG+ G+ + + + Sbjct: 7 LRFKSLG-SGSSG-NATLVEALGLLPFR-VLIDCGL--------GLKHLVYRLGQAGLQP 55 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ A+FITH H DH G L +PV+ S + + Sbjct: 56 EDIDAVFITHEHGDHIGCARSLSLRYRIPVWMSHGTHA------ATGSPDFDGLLRTARD 109 Query: 126 GDKVDVGAFSIESVRVNHSIPET 148 G+ +++G + V H E Sbjct: 110 GETIELGGLQLTPFTVPHDAREP 132 >gi|308071604|ref|YP_003873209.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] gi|305860883|gb|ADM72671.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] Length = 268 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 21/164 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITH 75 N + + ++ID G+ +D + + + L I +TH Sbjct: 14 GNATVVR----NEDTTLLIDAGL-----SAKRID------ELLKERDLSGEELDGILVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH L + ++P+YA+ + + G + + Sbjct: 59 EHSDHVKGLGAMARKYNLPIYANEKTWFAISNAV---GQIADDNRRILETGATREFESLR 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +ES ++H E + + D D + ++D Sbjct: 116 VESFGISHDAAEPVGYSFYDGAEKLSVATDLGYVSDKVKQAISD 159 >gi|126441460|ref|YP_001059589.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] gi|126220953|gb|ABN84459.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMK 63 + F LG E N + + ++ +++DCG S + + L +DL Sbjct: 1 MRFASLGSGSE--GNALVVEASNGATTTRVLLDCGFSAKELERRLARIDL---------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L AI +TH H DH G L +P+Y S + A + Sbjct: 49 RVDDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + VG + V H E + V + D + Sbjct: 103 WSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|124383458|ref|YP_001029080.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10229] gi|124291478|gb|ABN00747.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10229] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMK 63 + F LG E N + + ++ +++DCG S + + L +DL Sbjct: 1 MRFASLGSGSE--GNALVVEASNGATTTRVLLDCGFSAKELERRLARIDL---------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L AI +TH H DH G L +P+Y S + A + Sbjct: 49 RVDDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + VG + V H E + V + D + Sbjct: 103 WSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|53719866|ref|YP_108852.1| hypothetical protein BPSL2256 [Burkholderia pseudomallei K96243] gi|53723771|ref|YP_103296.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] gi|67642967|ref|ZP_00441717.1| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] gi|76809136|ref|YP_334082.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] gi|121600703|ref|YP_993490.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126449138|ref|YP_001080998.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|126453263|ref|YP_001066870.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|134277726|ref|ZP_01764441.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|167001774|ref|ZP_02267566.1| metallo-beta-lactamase family protein [Burkholderia mallei PRL-20] gi|167739304|ref|ZP_02412078.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 14] gi|167816519|ref|ZP_02448199.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 91] gi|167824913|ref|ZP_02456384.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 9] gi|167846431|ref|ZP_02471939.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei B7210] gi|167895010|ref|ZP_02482412.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 7894] gi|167903395|ref|ZP_02490600.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei NCTC 13177] gi|167911648|ref|ZP_02498739.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 112] gi|167919646|ref|ZP_02506737.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei BCC215] gi|226198923|ref|ZP_03794486.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|237812981|ref|YP_002897432.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|242318101|ref|ZP_04817117.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|254178289|ref|ZP_04884944.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] gi|254184400|ref|ZP_04890990.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|254191433|ref|ZP_04897937.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254195938|ref|ZP_04902364.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] gi|254200250|ref|ZP_04906616.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|254209328|ref|ZP_04915674.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|254261141|ref|ZP_04952195.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] gi|254297065|ref|ZP_04964518.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|254358002|ref|ZP_04974275.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] gi|52210280|emb|CAH36259.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|52427194|gb|AAU47787.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] gi|76578589|gb|ABA48064.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] gi|121229513|gb|ABM52031.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126226905|gb|ABN90445.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|126242008|gb|ABO05101.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|134251376|gb|EBA51455.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|147749846|gb|EDK56920.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|147750101|gb|EDK57172.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|148027129|gb|EDK85150.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] gi|157807173|gb|EDO84343.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|157939105|gb|EDO94775.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160699328|gb|EDP89298.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] gi|169652683|gb|EDS85376.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] gi|184214931|gb|EDU11974.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|225929023|gb|EEH25047.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|237506604|gb|ACQ98922.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|238524198|gb|EEP87632.1| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] gi|242141340|gb|EES27742.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|243062466|gb|EES44652.1| metallo-beta-lactamase family protein [Burkholderia mallei PRL-20] gi|254219830|gb|EET09214.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMK 63 + F LG E N + + ++ +++DCG S + + L +DL Sbjct: 1 MRFASLGSGSE--GNALVVEASNGATTTRVLLDCGFSAKELERRLARIDL---------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L AI +TH H DH G L +P+Y S + A + Sbjct: 49 RVDDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + VG + V H E + V + D + Sbjct: 103 WSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|149194170|ref|ZP_01871268.1| hypothetical protein CMTB2_03758 [Caminibacter mediatlanticus TB-2] gi|149136123|gb|EDM24601.1| hypothetical protein CMTB2_03758 [Caminibacter mediatlanticus TB-2] Length = 193 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 28/178 (15%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 GE N + + I+ID GV F+ + + AI Sbjct: 8 CGEFYTNCYIV-------DRSIVIDPGVG--------------AFEFVKEHCDEVKAIIN 46 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH + + P+Y LE K P G+ G Sbjct: 47 THGHFDHIWDNKKVKEYYDAPIYIHKDDAFFLENDPFGFNPPKVKPDFLLDEGEVEIAGK 106 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 + P + I N + +GD+ D + ++ + + + Sbjct: 107 -KVLIRHFPGHTPGS----ITIEFENDMFSGDFIFDGSIGRVDFPYSNPEKMKKSIKK 159 >gi|253580435|ref|ZP_04857700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848165|gb|EES76130.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 538 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 13/107 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + Y ++ ++DCG+ D ++ Sbjct: 1 MKITFIGATHEVTGSC----YYLEAAGHKFLVDCGMEQGPDYYENAEIPVA--------L 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 + + +THAH DH G L +++ PVYA+ L + Sbjct: 49 GEIEFVLLTHAHIDHSGNLPAIYAKGFRGPVYATDATSHLCDIMLRD 95 >gi|251772603|gb|EES53168.1| putative metallo-beta-lactamase family protein [Leptospirillum ferrodiazotrophum] Length = 476 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 60/468 (12%), Positives = 125/468 (26%), Gaps = 98/468 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL-------PGVDLVFP 56 +L F G + + G ++DCG+ DD+ G D Sbjct: 13 MKLTFH--GAARRVTGSCHQVSAGGRE----FLVDCGMFQGHDDMSHENSQPLGFD---- 62 Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---- 111 + + A+ +THAH DH G L L P+ ++P L + Sbjct: 63 --------PREISAVLLTHAHLDHCGRLPLLVKQGFRGPIISTPATRDLASIVLLDAAHI 114 Query: 112 ----------ERVSKKIPCISFQAGDKVDVGAFSIES-------------VRVNHSIPET 148 + D + + S+E I + Sbjct: 115 LEEHALHQARHGGKDLPLYTNTDVFDTLRLFQTSVEYGGKVSLAPGVDAIFHDAGHILGS 174 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 ++ I G + + D + + + ++ ++T R Sbjct: 175 ASVQIVERGGGLRTRTLFSGDLGSSGRGFLNPPA----PPVDSDVVVMETTYGDRNHR-S 229 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII------------------------ 244 E I + I + K V + ++ R + I+ Sbjct: 230 YEDSIAELKSKISETFKRGGTVLIPTFALERTQEILYLFREWDGEGFFPAEAKVYLDSPM 289 Query: 245 -----DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 D+ E+ R + + + +I+ + Sbjct: 290 AIRSTDVFERYSRDFSPAIRDMLDRHEDPFHFERLVMARSSDDSRRINSAKGPSIILAGS 349 Query: 300 G--SQGEPRSALAQ-LSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 G S G + + + + + + + G I+ E+ VR+ Sbjct: 350 GMLSGGRMMYHIEREIDNPASSLIFVGYQGEGTLGRTLVDG----ARKIRIFGSERDVRI 405 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIR-PQVLVAIHGEPLHLVAHKE 403 S H DL + + P++ + +HGE + ++ Sbjct: 406 DMAMING---FSAHADQKDLLAWCRSMAVPELAILVHGEDRSMEGFRK 450 >gi|325524401|gb|EGD02483.1| beta-lactamase domain-containing protein [Burkholderia sp. TJI49] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPG-VDLVFPDITFIMK 63 + F LG E N + S ++ +++DCG S + + G ++L D Sbjct: 1 MRFASLGSGSE--GNALVVEATSGTTTTRVLLDCGFSAKEVERRLGRLNLCIGD------ 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L AI ITH H DH G+ L +P+Y S + A + Sbjct: 53 ----LDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGADDAEVDL------HVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 103 WGDETAAIGDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|27468149|ref|NP_764786.1| hypothetical protein SE1231 [Staphylococcus epidermidis ATCC 12228] gi|57867063|ref|YP_188686.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251810961|ref|ZP_04825434.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis BCM-HMP0060] gi|293366494|ref|ZP_06613171.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315695|gb|AAO04830.1|AE016748_64 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637721|gb|AAW54509.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251805471|gb|EES58128.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis BCM-HMP0060] gi|291319263|gb|EFE59632.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735290|gb|EGG71582.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU045] gi|329737336|gb|EGG73590.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU028] Length = 207 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 20/141 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + + I + + K L AI +THAH DH GAL Sbjct: 16 YFIENEENVILID-----PSSESQKI------IKKLNQINKPLKAILLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGD--KVDVGAFSI 136 ++ VPVY S L K +SK + + ++ F Sbjct: 65 NIIEKYQVPVYMSKDEFDFLTDPDKNGSSKFTQYGLSKIESHANPLSLSEGPAEIEGFKF 124 Query: 137 ESVRVNHSIPETMALVIRSPV 157 + + P +++ V Sbjct: 125 KVLHTPGHSPGSLSFVFNDFA 145 >gi|330975303|gb|EGH75369.1| Beta-lactamase-like protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 252 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 58/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRDTER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEIAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|228990187|ref|ZP_04150157.1| Beta-lactamase domain protein [Bacillus pseudomycoides DSM 12442] gi|228769550|gb|EEM18143.1| Beta-lactamase domain protein [Bacillus pseudomycoides DSM 12442] Length = 244 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 46/251 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + GY +++DCG GV +I ++ A+ Sbjct: 10 GGFPEVGEATS--GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAV 55 Query: 72 FITHAHEDHYGALHDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++H H DH + L L P+Y F + + Sbjct: 56 LLSHYHHDHVADIGVLQYARLITSMAKGQLPEL--PIYGHGFDVQG----FSSLTHAPHT 109 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + + + +G FSI ++ H + A+ I IV++ D + I Sbjct: 110 KGIVYNPEETLQIGPFSISFLKTVHPVI-CYAMRITVGDKVIVYSADSSYIPEFIPF--- 165 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C+ + + + DI KNA L+ T Sbjct: 166 ---------TKDADLFICECNMYAHQEAAKAGHMNSTEVADIAKNANVKELLLTHLPHTG 216 Query: 239 RIRSIIDIAEQ 249 I +++ A+Q Sbjct: 217 NISDLVEEAKQ 227 >gi|255017991|ref|ZP_05290117.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL F2-515] Length = 65 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 25/64 (39%) Query: 492 AYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVF 551 Y + G + + + + + + ++ I+ L+ L + ++P++ Sbjct: 2 IYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPI 61 Query: 552 INKI 555 I ++ Sbjct: 62 IMEV 65 >gi|332828948|gb|EGK01631.1| hypothetical protein HMPREF9455_02163 [Dysgonomonas gadei ATCC BAA-286] Length = 252 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 77/242 (31%), Gaps = 45/242 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 ++IDCG PD I +E + + +TH H DH G L Sbjct: 40 VSIDDTRLLIDCG---------------PDFREQIIHEEFAAIDGVLLTHEHYDHVGGLD 84 Query: 86 DLWSFL---HVPVYASPFAIGLLEAK----RVYERVS--KKIPCISFQAGDKVDVGAFSI 136 DL F V +YA+ + L + + + + + + Sbjct: 85 DLRPFCKFADVDIYANDITLDALRKRTPYFFLEHKYPGVPALLLHEVDKDRSFIIKNVEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + + V H ++ +G + D K + + EG+ L+ Sbjct: 145 QPIGVMHY----KLPILGYRIGKFAYLTDVKFIPEEEYSKL-----------EGVDILVI 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R G IS + + + +I K A + S + + ++ + Sbjct: 190 ---NALRMGEHISHLSLSQALEEIEKIAPKRAYLIHMSHGIG-LHDVVQRTLPENVFLSY 245 Query: 257 LG 258 G Sbjct: 246 DG 247 >gi|210135012|ref|YP_002301451.1| hypothetical protein HPP12_0819 [Helicobacter pylori P12] gi|210132980|gb|ACJ07971.1| hypothetical protein HPP12_0819 [Helicobacter pylori P12] Length = 205 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKTLKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPTFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|319647004|ref|ZP_08001230.1| YflN protein [Bacillus sp. BT1B_CT2] gi|317390828|gb|EFV71629.1| YflN protein [Bacillus sp. BT1B_CT2] Length = 264 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-----LMAIFITHA 76 +Y P SR+ ++ID G+ P + + + ++ L I +TH Sbjct: 32 NVYFIFDPDSREAVLIDAGMP---KSAPFI---------LREAKERFGDFRLKGIVLTHG 79 Query: 77 HEDHYGALHDLWSFLHVPVYASP 99 H DH GAL L VPVYA Sbjct: 80 HFDHVGALESLLETWPVPVYAHE 102 >gi|299531727|ref|ZP_07045131.1| beta-lactamase-like protein [Comamonas testosteroni S44] gi|298720286|gb|EFI61239.1| beta-lactamase-like protein [Comamonas testosteroni S44] Length = 466 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 69/490 (14%), Positives = 131/490 (26%), Gaps = 95/490 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L +IDCG++ + + Sbjct: 1 MNITFHGAAQSVTGSCFLVEAHGCR----FLIDCGMAQGGREADEHNQQAFAFD-----A 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV-------------- 110 + L + +THAH DH G L L + P+Y + LLE Sbjct: 52 EGLDFVVLTHAHIDHSGLLPKLVAQGFKGPIYVTLATKDLLEVLLKDSAHIQMMDAERAA 111 Query: 111 ----YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI-PETMALVIRSPVGNIVHTGD 165 + ++ P + + V ++++ HS P V G+I+ + Sbjct: 112 RRQREGKRREREPAVPLYSLAHVASTLEQVQAMPYRHSFEPHPAVTVCFQDAGHILGSA- 170 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEG---------------ILALMCDSTNAMREGTCISE 210 + + + L A G+ G L+ +ST R+ Sbjct: 171 --IVELWLADGHGGSRKLVASGDLGQPGRVILRDPTPIMDADLLLIESTYGDRQHRSTG- 227 Query: 211 KGIKKNIYDIMKNA--KGCVLVTTFSSSVSRIRSIIDI---------------------- 246 + + D++ G V++ F+ V R + ++ Sbjct: 228 -DTLEELVDVVTRTVPHGNVVIPAFA--VGRTQELLYHFLQLIQQQRLPPVEIFVDSPMA 284 Query: 247 AEQIGRKIVLLG------SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 + G L V + I + D R ++I+ Sbjct: 285 VAATDITLRHFGVFDEEARQLLGSVKRLKESPHIH-FISDVEDSIKLNRIRSGAVIISAS 343 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 + L L R + V+ G + + + + Sbjct: 344 GMCDAGRVLHHLKNNLSR-----PECAVVICGFQAEG--SLGRRLVDGARLVRLLGDEVE 396 Query: 361 AECPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 +H S H L PQ +HGEP A L + V Sbjct: 397 VRAGIHTLGGFSAHADQQALLDWAAAFTRPPQQTFVVHGEPQASRALAALLHERLHFSVQ 456 Query: 415 PVRNGKMLRL 424 + G++ Sbjct: 457 VPQPGQVFEF 466 >gi|307729244|ref|YP_003906468.1| beta-lactamase domain-containing protein [Burkholderia sp. CCGE1003] gi|307583779|gb|ADN57177.1| beta-lactamase domain protein [Burkholderia sp. CCGE1003] Length = 257 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALLVEAQSGATTTRVLLDCGFSAKEVER--------RLNRLGSSA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + L AI ITH H DH G+ L +P++ S + A + Sbjct: 51 EALDAILITHEHSDHIGSALTLARKWSIPLFMSWGTARAVGA------DEADVDLHVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V +G S+ V H E + V + V + D Sbjct: 105 DEAVAIGDLSVLPYTVPHDAREPLQYVFSNGVSRLGVLTDVGT 147 >gi|163119289|ref|YP_078008.2| beta-lactamase-like protein YflN [Bacillus licheniformis ATCC 14580] gi|145902795|gb|AAU22370.2| Beta-lactamase-like protein YflN [Bacillus licheniformis ATCC 14580] Length = 264 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-----LMAIFITHA 76 +Y P SR+ ++ID G+ P + + + ++ L I +TH Sbjct: 32 NVYFIFDPDSREAVLIDAGMP---KSAPFI---------LREAKERFGDFRLKGIVLTHG 79 Query: 77 HEDHYGALHDLWSFLHVPVYASP 99 H DH GAL L VPVYA Sbjct: 80 HFDHVGALESLLETWPVPVYAHE 102 >gi|254251997|ref|ZP_04945315.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Burkholderia dolosa AUO158] gi|124894606|gb|EAY68486.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Burkholderia dolosa AUO158] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + D G+D Sbjct: 1 MRFASLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVDRRLGRLNLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI +TH H DH G+ L +P+Y S + A I Sbjct: 52 -------DLDAILVTHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DDADID 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V + ++ V H E + V + D + Sbjct: 99 LHVLWGDETVAIRDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|52784582|ref|YP_090411.1| YflN [Bacillus licheniformis ATCC 14580] gi|52347084|gb|AAU39718.1| YflN [Bacillus licheniformis ATCC 14580] Length = 265 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-----LMAIFITHA 76 +Y P SR+ ++ID G+ P + + + ++ L I +TH Sbjct: 33 NVYFIFDPDSREAVLIDAGMP---KSAPFI---------LREAKERFGDFRLKGIVLTHG 80 Query: 77 HEDHYGALHDLWSFLHVPVYASP 99 H DH GAL L VPVYA Sbjct: 81 HFDHVGALESLLETWPVPVYAHE 103 >gi|332673382|gb|AEE70199.1| metallo-beta-lactamase [Helicobacter pylori 83] Length = 205 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDI---TFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFFSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|312621840|ref|YP_004023453.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202307|gb|ADQ45634.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 198 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 30/189 (15%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G N ++G ++ ++ID P DD ++ + ++ AI Sbjct: 7 EVGDVVTNCYVFG-----KKEVVIID-----PGDDATKIENII------VENDLIPRAIL 50 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA--KRVYERVSKKIPCIS---FQAGD 127 +TH H DH+ L +PVYA +L + + +I I F+ GD Sbjct: 51 LTHGHFDHFLGCCYLKQRFKLPVYAHREEKEVLLNPVYNLSYLIGSEIKMICDGYFEDGD 110 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCA 185 + FS++ + P + + NI+ +GD +K + ++D + Sbjct: 111 VFEFTDFSLKVLHTPGHTPGSSCFL----SDNILFSGDTLFKDSYGRADLPLGNQDMIYK 166 Query: 186 IGNEGILAL 194 E +L L Sbjct: 167 SIKEKLLTL 175 >gi|310644833|ref|YP_003949592.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309249784|gb|ADO59351.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 268 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 21/179 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITH 75 N + + ++ID G+ +D + + + L I +TH Sbjct: 14 GNATVVR----NEDTTLLIDAGL-----SAKRID------ELLKERDLSGEELDGILVTH 58 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH L + ++P+YA+ + + G + + Sbjct: 59 EHSDHVKGLGAMARKYNLPIYANEKTWFAISNAV---GQIADDNRRILETGATREFESLR 115 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 +ES ++H E + + D D + ++D D L N + L Sbjct: 116 VESFGISHDAAEPVGYSFYDGAEKLSVATDLGYVSDKVKQAISDADVLVLEANHDVEML 174 >gi|154505865|ref|ZP_02042603.1| hypothetical protein RUMGNA_03407 [Ruminococcus gnavus ATCC 29149] gi|153793883|gb|EDN76303.1| hypothetical protein RUMGNA_03407 [Ruminococcus gnavus ATCC 29149] Length = 206 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G +G N + + ++++ ++D P P + FI E L I + Sbjct: 8 IGMVGTNCYVV--YNENTKECFVVD-------PAAPSA----PLVEFIQTEGLQLQGILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPF 100 TH H DH + L VPVYAS Sbjct: 55 THGHFDHIMGIDTLRREWSVPVYASAL 81 >gi|120610022|ref|YP_969700.1| beta-lactamase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588486|gb|ABM31926.1| beta-lactamase domain protein [Acidovorax citrulli AAC00-1] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 54/167 (32%), Gaps = 30/167 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F LG G G N + + + +++DCG+ + Sbjct: 2 LRFKNLG-SGSSG-NATVVEGRCGTQVRRLLVDCGLG---------------PRQLAGRL 44 Query: 66 -------KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ AIFITH H DH G L + +P + S + A Sbjct: 45 GEAGLAIDDIDAIFITHEHSDHVGGLQKVALRHRIPAWMSHGTYTAIGA------PDLDG 98 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ +D+GAF V H E + L +I D Sbjct: 99 LLHLTADGESIDLGAFEARPFTVPHDAREPLHLRCSDGATHIGLLTD 145 >gi|9651948|gb|AAF91325.1|AF246294_1 unknown [Bacillus cereus ATCC 10876] Length = 47 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP 49 L + LGGV EIG NM Y ++IDCG FP + L Sbjct: 5 KNNLSIVALGGVNEIGKNMYAIQY----ENDIVVIDCGSKFPDESLL 47 >gi|322419411|ref|YP_004198634.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320125798|gb|ADW13358.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 257 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 46/141 (32%), Gaps = 22/141 (15%) Query: 29 PSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + ++ID G+S + GVD L I +TH H DH + Sbjct: 18 ETDSCRLLIDAGLSGRETITRLCSIGVD------------AATLDGIMVTHEHTDHIRGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L L VPV S + V K I F AG SI+ + H Sbjct: 66 GTLARRLKVPVLGSSRMLAAA------SHVIGKAELIEFDAGSPFVFKGASIDPFPITHD 119 Query: 145 IPETMALVIRSPVGNIVHTGD 165 + + I S G I D Sbjct: 120 ACDPVGFRIESAEGCIGFATD 140 >gi|154496021|ref|ZP_02034717.1| hypothetical protein BACCAP_00304 [Bacteroides capillosus ATCC 29799] gi|150274904|gb|EDN01960.1| hypothetical protein BACCAP_00304 [Bacteroides capillosus ATCC 29799] Length = 262 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 50/142 (35%), Gaps = 34/142 (23%) Query: 35 IMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 I+ID G+S G+D L I ITH H DH L+ L Sbjct: 25 ILIDAGISARRITKSLRELGID------------PSQLSGILITHEHSDHICGLNTLTKQ 72 Query: 91 LHVPVYASPFA-------IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 +PVYAS I LE + +F+ G+ ++G ++ES H Sbjct: 73 FTMPVYASRGTGRQLCYRIAFLEDRIR-----------TFETGNAFEIGGLTVESFATPH 121 Query: 144 SIPETMALVIRSPVGNIVHTGD 165 E++ + + D Sbjct: 122 DTAESVGYAVSAGGRKAAVVTD 143 >gi|331002005|ref|ZP_08325525.1| hypothetical protein HMPREF0491_00387 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411801|gb|EGG91206.1| hypothetical protein HMPREF0491_00387 [Lachnospiraceae oral taxon 107 str. F0167] Length = 220 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 69/202 (34%), Gaps = 26/202 (12%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N + + LG V +Y + S + +++D G D + Sbjct: 1 MNNIGIYVMTLGPVQ-----TNVYIAYNKKSLECLIVD-------PSAQG-DAII---NV 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I + + MAI +TH H DH A++DL ++ VY S +L S Sbjct: 45 IEENKLKPMAILLTHGHFDHIMAVNDLVKRYNIKVYISKHDDEMLSDSHKSGGRSFIGNG 104 Query: 121 ISFQAGDKVDVGAF------SIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDA 172 +A +D G I+ + + I ++ +GD ++ D Sbjct: 105 YITKADVLLDDGDILNLLGTDIKFISTPGHTKGSGCYYI--EDEKLLFSGDTVFREDCGR 162 Query: 173 ILGDVTDKDSLCAIGNEGILAL 194 D S+ E +L L Sbjct: 163 TDLYGGDNPSIIKSIYEKVLTL 184 >gi|124485446|ref|YP_001030062.1| hypothetical protein Mlab_0621 [Methanocorpusculum labreanum Z] gi|124362987|gb|ABN06795.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 280 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 45/149 (30%), Gaps = 17/149 (11%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + I+ID G+ + + + + NL + ITH H Sbjct: 12 GNCIYVG----NDTDSIVIDAGLGY----------LMRTLQSMRLNTDNLRGLCITHEHS 57 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + HVPV+ S + L + + + V G I + Sbjct: 58 DHVRSAKAFVKAAHVPVFGSGGTLDALR---YGNIIPATAERVICREHVPVQAGGLKITT 114 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R H E VI I D Sbjct: 115 FRAYHDAAEPTGFVIDDGDSRIGICLDTH 143 >gi|51246458|ref|YP_066342.1| hypothetical protein DP2606 [Desulfotalea psychrophila LSv54] gi|50877495|emb|CAG37335.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 256 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 21/164 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G ++ + S + I+ID G F + + + I + Sbjct: 1 MRFSVLG-SGSRGNSVYI-----ESGKTAILIDAG--FSGKE------IERRLAVIGRST 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI-SFQ 124 L AI +TH H DH G + L + V+A+ + E + KKI I F+ Sbjct: 47 DCLRAICVTHEHRDHVGGVGVLARRCKMSVWANEGTL------LGSEGIIKKIDNIREFE 100 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 GD + +G + S V H + + +I + + + D Sbjct: 101 TGDILQIGDLELRSFSVMHDSADPVGYIISNGEKTLGYCTDTGY 144 >gi|330836718|ref|YP_004411359.1| beta-lactamase domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748621|gb|AEC01977.1| beta-lactamase domain protein [Spirochaeta coccoides DSM 17374] Length = 560 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 54/409 (13%), Positives = 128/409 (31%), Gaps = 47/409 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G + + + + I+IDCG++ D+ D + Sbjct: 1 MKISFY--GAARHVTGSCFMLSADGMN----ILIDCGLAQGTDERVQGDE-------LPF 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + + +THAH DH G + L +YA+ L E +++ Sbjct: 48 KAETVDVMLLTHAHIDHSGRIPLLVKEGFSGAIYATEATRNLCEIMLADSAHIQQME-TE 106 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV----HTGDWKLDDDAILGDVT 178 +Q + G ++E + ++M L G ++ H +D +LG + Sbjct: 107 WQNRKQRRAGKPAVEPLYTTADAEKSMELFRECRYGEVMELSAHVSVRFIDAGHLLGSAS 166 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI--------YDIMKNAKGCVLV 230 + ++ G E I D N + + K + + + Sbjct: 167 MEITVKENGEERIFVFSGDIGNFDQPLIQDPQYPKKADYVIVESTYGDRLHGGSGSGKPG 226 Query: 231 TTFSSSVSRIRSIIDIAEQI---GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 + +++++R + + DI + G +V+ ++ R + + + +L + Sbjct: 227 SQKATTIARAQDLADIIAETFAQGGNVVIPAFAVGRTQEILYFLRYMLDHKLN-GLQDVP 285 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS--RAIPGNEVAIGHI 345 ++ L V + + E + + ++F S N+ + Sbjct: 286 VFVDSPLSV----KATRIFATSMEFFDDEALELAKKGHNPILFPSLVTITDANDSKALNF 341 Query: 346 KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 +N + RP+ + G Sbjct: 342 RNEPAVIISSSGM----------CEAGRIKHHLKHNLWRPESCIVFSGY 380 >gi|228996281|ref|ZP_04155926.1| Beta-lactamase domain protein [Bacillus mycoides Rock3-17] gi|229003948|ref|ZP_04161754.1| Beta-lactamase domain protein [Bacillus mycoides Rock1-4] gi|228757317|gb|EEM06556.1| Beta-lactamase domain protein [Bacillus mycoides Rock1-4] gi|228763473|gb|EEM12375.1| Beta-lactamase domain protein [Bacillus mycoides Rock3-17] Length = 244 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 82/251 (32%), Gaps = 46/251 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + GY +++DCG GV +I ++ A+ Sbjct: 10 GGFPEVGEATS--GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAV 55 Query: 72 FITHAHEDHYGALHDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++H H DH + L L P+Y F + + Sbjct: 56 LLSHYHHDHVADIGVLQYARLITSMAKGQLPEL--PIYGHGFDVQG----FSSLTHAPHT 109 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 I + + + +G FSI ++ H + A+ I IV++ D + I Sbjct: 110 KGIVYNPEETLQIGPFSISFLKTVHPVI-CYAMRITVGDKVIVYSADSSYIPEFIPF--- 165 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + +C+ + + + D+ KNA L+ T Sbjct: 166 ---------TKDADLFICECNMYAHQEAAKAGHMNSTEVADVAKNANVKELLLTHLPHTG 216 Query: 239 RIRSIIDIAEQ 249 I +++ A+Q Sbjct: 217 NISDLVEEAKQ 227 >gi|167623431|ref|YP_001673725.1| beta-lactamase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353453|gb|ABZ76066.1| beta-lactamase domain protein [Shewanella halifaxensis HAW-EB4] Length = 497 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 62/424 (14%), Positives = 124/424 (29%), Gaps = 70/424 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + SS I+IDCG+ F + D D I + ++ A+ Sbjct: 7 GAVNGVTGSCHQLDINPQSS---ILIDCGL-FQGAET--ADKTAADQLQIEFDLTHITAL 60 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRVYERVSKKIPCISFQAG 126 +TH H DH G + L + + P+YA+ + L +E + + Sbjct: 61 IVTHCHIDHVGRIPYLLAAGFNGPIYATTASAALLPLVIEDALKVGVTRNQRLINLYLKR 120 Query: 127 DKVDVGAFSIESV-------------------RVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + E V I + + I ++ H K Sbjct: 121 LQQLIQPIDYEQWFTLEVKNSDSGYQQAKAQFNVAGHILGSAYVEIELSGSSLNHNCTHK 180 Query: 168 LDDDAILGDVT--------------DKDSLCAIGNEG---------------ILALMCDS 198 + D + G+ G L+ +S Sbjct: 181 NSHKNTDIHNSNSGNRHDDDIKNEKDSHLVVFSGDLGASNTPLLPSPKSPFRADTLVIES 240 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 T + + +++ +++ A G VL+ FS + R + ++ EQ Sbjct: 241 TYGDKNHHNREHR--AESLRHVIERAVSDNGVVLIPAFS--IGRTQELLYELEQ--IIFS 294 Query: 256 LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG 315 + + + + + ID + + L+ E V+A S L + Sbjct: 295 QQHNPIWQSIEIIIDSPMAANFTEQYIEYK-NLWDSEAKAVLAQQRHPLDFSQLYTIDSH 353 Query: 316 EMRNVKLAEKDTVIFSSRAIPGNEV-AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPN 374 + + + + I + + G I N L A+ G + Sbjct: 354 QDHLAVVNYLSSRQKPAIVIAASGMCTGGRIINYLQRFLAEPTADILFVGYQAKGTIGRD 413 Query: 375 DLKR 378 + Sbjct: 414 IQEY 417 >gi|89097475|ref|ZP_01170364.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] gi|89087771|gb|EAR66883.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] Length = 282 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 Y S S W++ID G+ PK + + + AI +TH H DH G Sbjct: 40 YAELSDGSGDWVLIDAGM--PKS----AEKIIEAAEDLYGVGAAPKAIVLTHGHFDHIGG 93 Query: 84 LHDLWSFLHVPVYASPF 100 + L VPVYA Sbjct: 94 IIGLLKTWKVPVYAHEL 110 >gi|15805685|ref|NP_294381.1| hypothetical protein DR_0658 [Deinococcus radiodurans R1] gi|6458361|gb|AAF10237.1|AE001923_4 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 364 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 W+++D G +PG + + + AI +TH H DH GALH L + Sbjct: 94 GDWVLVDTG-------MPGTAGLIRQAAAQVYGARAPQAIVLTHGHFDHIGALHALLAEW 146 Query: 92 HVPVYASP 99 +VPVYA P Sbjct: 147 NVPVYAHP 154 >gi|328954658|ref|YP_004371991.1| beta-lactamase domain protein [Coriobacterium glomerans PW2] gi|328454982|gb|AEB06176.1| beta-lactamase domain protein [Coriobacterium glomerans PW2] Length = 280 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 27/231 (11%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N AL + IMID G S + V + + + + A+ Sbjct: 19 GSGSKG-NCALVE----APEGLIMIDDGFSRRE--------VLARMHRLGLDETRVRALV 65 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH + ++AS +P I F+AGD +++ Sbjct: 66 LTHEHSDHVSGVGVWCRKFDGTIWASAGTA-------EKRSYLACLPFIRFEAGDALEIA 118 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I++ +H + + L I D + +A + ++ D L N + Sbjct: 119 GVRIQTFSTSHDVANPIGLRFSCEEDAIGFVTDTGILSEAAMRELRDVRILALESNHDVA 178 Query: 193 ALMCDS-------TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 L S A G + + + + + + + V + + Sbjct: 179 MLRGGSYPRMLQDRIASSRGHLSNAQAAEAAVDLVGEGTEQIVCMHISLEN 229 >gi|270296409|ref|ZP_06202609.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273813|gb|EFA19675.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 241 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 45/219 (20%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHD 86 + I+IDCG PD M + + + +TH H DH G L D Sbjct: 29 TDDAVILIDCG---------------PDFREQMLRASSFEKIDGVLVTHEHYDHVGGLDD 73 Query: 87 LWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIE 137 L F +P+Y+ + L A+ +I +AG + + Sbjct: 74 LRPFGRFADIPIYSDAYTAAHLRARMPYCFVDKVYPGVPRIYLQEVEAGQAFHINRTEVL 133 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 +RV H + I +G I TD + E + L Sbjct: 134 PLRVMHGRLPILGYRIGGRLGYI-----------------TDMHMMPEESYEQLKGLDVL 176 Query: 198 STNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSS 235 NA+R + + I + + + AK + Sbjct: 177 VMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHH 215 >gi|167769374|ref|ZP_02441427.1| hypothetical protein ANACOL_00700 [Anaerotruncus colihominis DSM 17241] gi|167668342|gb|EDS12472.1| hypothetical protein ANACOL_00700 [Anaerotruncus colihominis DSM 17241] Length = 228 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 L+A+ +TH H DH L L L +P+YA +LE R ++ + +AG Sbjct: 14 LLAVLVTHEHTDHISGLRVLLKKLRIPLYA---TAEVLERLRWDGVIAPDQEAFTVEAGR 70 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPV 157 VG+ I+ H ++ +++P Sbjct: 71 PFSVGSLVIDGFDTPHDSVHSVGYRVQTPD 100 >gi|78222555|ref|YP_384302.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Geobacter metallireducens GS-15] gi|78193810|gb|ABB31577.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Geobacter metallireducens GS-15] Length = 472 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 120/402 (29%), Gaps = 49/402 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMA 70 GG + + S I+IDCG+ D G P I F + Sbjct: 7 GGQYGVTGSCHELVI---SENASILIDCGLFHGHDADTGKGKKHTPFIDF---PLDRVQG 60 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL---------------EAKRVYERV 114 + +TH H DH G + L P++ S + LL E Sbjct: 61 LVLTHVHIDHCGRIPHLMGAGFQGPIWCSEASALLLPLVLEDAVKVGITRDEGLIERFIG 120 Query: 115 SKKIPCISFQAGDKVDVG-----AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + K G +G S+ + H I + + ++ T + D Sbjct: 121 AMKKRLAPLPYGTWRKLGTWDGMDVSLRLQQAGH-ILGSAYAELSVARPSVQETTASRHD 179 Query: 170 DDAILGDVTDKDS-LCAI-----GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 ++ ++ D + + E L+ +ST R ++ +K I++ Sbjct: 180 NETVVVFSGDLGAPFTPLLPDPAPPERADILVLESTYGDRLHEGREQRR-EKLRQVIIRA 238 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ----- 278 + + + S+ R + ++ E ++ + + ++ D I D Sbjct: 239 LENRGALLVPAFSIGRTQELLYEIE----SLIAEHRNDEAATNLPWDDLEIIVDSPLALR 294 Query: 279 -LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMR-NVKLAEKDTVIFSSRAI 335 + D L+ +E V++ G + + + R V A Sbjct: 295 VTEVYDRLRHLWDQEATEVVSQGRHPLSFEQMTVIENHNDHRATVDYLRGTARPCVVIAA 354 Query: 336 PGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLK 377 G A G I N L + G P L+ Sbjct: 355 GGM-CAGGRIVNYLKALMGDPRTDILFVGYQAHGTPGRGILE 395 >gi|221632944|ref|YP_002522167.1| hypothetical protein trd_0950 [Thermomicrobium roseum DSM 5159] gi|221156952|gb|ACM06079.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159] Length = 263 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 59/166 (35%), Gaps = 33/166 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER-KNLMAIFITHAHEDHYG- 82 GY R +++DCG PG+ P + + R NL AI ++H H+DH Sbjct: 21 GYLLECGRTSLLVDCG--------PGI---LP--SLLRYRRLDNLDAIVLSHLHQDHVLD 67 Query: 83 ------ALHD--LWSFLHVPVYASP--------FAIGLLEAKRVYERVSKKIPCI-SFQA 125 AL +P++ P A L + + I F Sbjct: 68 IVPMRYALKYAPALHRRRIPLWVPPGGSLFLQRLAQVLALGSEAADSFFAETFEIAEFDP 127 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++V + I H IP AL + P +V+T D DD Sbjct: 128 QSVLEVPGWEIRFHPTRHWIP-CWALRVTCPHATVVYTADTGWDDT 172 >gi|15611816|ref|NP_223467.1| hypothetical protein jhp0749 [Helicobacter pylori J99] gi|4155325|gb|AAD06340.1| putative [Helicobacter pylori J99] Length = 205 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGL 104 GVD + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GVDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKGTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPTFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|237746767|ref|ZP_04577247.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes HOxBLS] gi|229378118|gb|EEO28209.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes HOxBLS] Length = 260 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 26/190 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N L + ++M+DCG F + + + +L A+ Sbjct: 7 GSGSKG-NSLLVSAKDGLTTTFVMVDCG--FGTRET------VRRLERVGCSPSDLSALI 57 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 +TH H DH G + +PV+ S L +S + GD +VG Sbjct: 58 VTHEHSDHAGGVLAFARRHRIPVWMSYGTFQALGKDFSEIDLSF------CRDGDCFNVG 111 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I + V+H E + + D T L A+ G Sbjct: 112 DLQISAFTVSHDAKEPLQFHMTDGAVKFGMLTDTG---------QTTPHILNAL--SGCD 160 Query: 193 ALMCDSTNAM 202 ALM + Sbjct: 161 ALMVECNYDD 170 >gi|330968862|gb|EGH68928.1| Beta-lactamase-like protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 252 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEIAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|66044796|ref|YP_234637.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] gi|63255503|gb|AAY36599.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] Length = 252 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEIAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|322381708|ref|ZP_08055667.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154332|gb|EFX46649.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 252 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 26/154 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKE 64 + L G G N G I+ID G+ + + + P Sbjct: 3 VKILASGSTG----NCIHIQSGETG----ILIDAGLPKTKIEKRLLENDIDP-------- 46 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + AIFITHAH DH L L + +PVYAS E K + I Sbjct: 47 -TQIKAIFITHAHADHTKGLP-LANKYKIPVYASEG-----EWKDIDSVDDDLCRFIMRH 99 Query: 125 AGDK--VDVGAFSIESVRVNHSIPETMALVIRSP 156 +GD V++G + +H E + I Sbjct: 100 SGDYTAVELGEVKLYPFSTHHDAYEPLGYAIEDR 133 >gi|194014605|ref|ZP_03053222.1| YhfI [Bacillus pumilus ATCC 7061] gi|194013631|gb|EDW23196.1| YhfI [Bacillus pumilus ATCC 7061] Length = 249 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 29/205 (14%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG-- 82 GY S +++DCG +D+ + L A+ ++H H DH Sbjct: 23 GYLFESDGFRLLVDCGSGVLSKLQQYIDI------------EELDAVLLSHYHHDHIADI 70 Query: 83 -------ALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 + +P+Y + + +K ++Q + + +G Sbjct: 71 GPLQYAKLVGYHLGKSSGPLPIYGHTGNQE-AFGRLADDVHTK---AKAYQPEEGIQIGP 126 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAIGNEGIL 192 F I+ ++ H E A+ I++ +V+T D + I D + G Sbjct: 127 FQIDFLKTVHPA-ECYAMRIQAGDAVVVYTADSSYQEAFIPFSKDADLLIAESNFYAGQD 185 Query: 193 ALMCDSTNAMREGTCISEKGIKKNI 217 N+ G E + + I Sbjct: 186 GSSAGHMNSTEVGKLAKEANVGELI 210 >gi|229544282|ref|ZP_04433341.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229325421|gb|EEN91097.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 284 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 24/154 (15%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYG 82 G + ++++D G +PG + + + A+ +TH H DH G Sbjct: 44 IGRAGTDAFVLVDAG-------MPGSAEAI--FSAVRARFGEKAKPKAVLLTHGHFDHVG 94 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRV--------YERVSKKIPCISFQAGDKVDVGAF 134 A+ L VPV+A + L + + KI I + VD+G Sbjct: 95 AIAPLLEKWDVPVFAHRLELPYLTGRETYPDPDPSVEGGLLAKISMI--YPNEPVDLGH- 151 Query: 135 SIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 +++ + + ++P I +P + H ++ Sbjct: 152 AVQPLPEDGTVPFLPGWKWIHTPGHSRGHVSFFR 185 >gi|186681842|ref|YP_001865038.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186464294|gb|ACC80095.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102] Length = 556 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 64/451 (14%), Positives = 135/451 (29%), Gaps = 76/451 (16%) Query: 16 EIGMNMALYGYGSPSSRK-----------WIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+G + Y + I++DCG+ DI+ + K Sbjct: 15 EVGTELECLPYSVQHHDEGVCLLVKMGPHRILLDCGME--------------DISSLAKG 60 Query: 65 RKN----------LMAIFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAK-RVYE 112 + I+HAH DH G L ++ +P+Y S LL + Sbjct: 61 LTKSERGSSSPLPADLVLISHAHPDHSRGLLALHKAYPKLPIYGSEVTSKLLPLNWLDQD 120 Query: 113 RVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRS----PVGNIVHTGDWK 167 C + V+ E H +P +A+++ +++TGD+ Sbjct: 121 AEEISKFCHALPLRSPVEFQDGLVAELFPAGH-LPGAVAILLTYTTKQRTYKLLYTGDFF 179 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDIMKNAK 225 L + ++ + L + + L+ + + E + + I + + Sbjct: 180 LSNSRLVEGL----RLEELRGLDLDVLIIEGSYGTSRHPHRRNQENQLAERINRAIADH- 234 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLS 282 V++ T + + + ++ + G L V A+ G ++ Sbjct: 235 CSVILPTPALGLGQEMLMLLRSHHH-----FTGRDLDIWVDGAVATGCDAYLELLPHLPP 289 Query: 283 DESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPG----N 338 + R + +L + E R V+ S + G Sbjct: 290 SVQNFARHQPLFW------DERVRPRVRRL-QAEHRPTVGKSPCIVLTDSTSDLGKHCQL 342 Query: 339 EVAIGHI-----KNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHG 393 + I + V + + + H ++ +RPQ ++ +HG Sbjct: 343 DTGPWLILLPEKIDIKVNKEYLAPTTVESYLL--AQHSDGPGTTQLIHNLRPQHVIFVHG 400 Query: 394 EPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 P +L L + V ++ L Sbjct: 401 SPAYLADLTSLEELQNRYHVHSPAANTLVEL 431 >gi|319796532|ref|YP_004158172.1| beta-lactamase domain protein [Variovorax paradoxus EPS] gi|315598995|gb|ADU40061.1| beta-lactamase domain protein [Variovorax paradoxus EPS] Length = 286 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 52/177 (29%), Gaps = 40/177 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G I + + + +++D G L E + Sbjct: 25 LGCSGAIAKDCRTTSFLVDTD---LLVDAGTGVGDLTL--------------DEMARIDD 67 Query: 71 IFITHAHEDHYGALHDLWSFLH------VPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 + +TH+H DH AL + + + V+A I L A + I Sbjct: 68 VVLTHSHLDHIAALPLMLDAVGSRRTQPLRVHALRATIEALRAHVFNNVIWPDFESIPSP 127 Query: 125 AGDKVDVGAFSI--------------ESVRVNHSIPETMALVIRSP--VGNIVHTGD 165 V S+ E + H++P +R + V +GD Sbjct: 128 EAPFVSFHNISVGQVLQLGTSAPKLIEVLPAVHTVP-ACGFAVRRATGGAHWVFSGD 183 >gi|308184598|ref|YP_003928731.1| hypothetical protein HPSJM_04120 [Helicobacter pylori SJM180] gi|308060518|gb|ADO02414.1| hypothetical protein HPSJM_04120 [Helicobacter pylori SJM180] Length = 205 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGL 104 GVD + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GVDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKGTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPTFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIGG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|152993758|ref|YP_001359479.1| RNA-metabolising metallo-beta-lactamase [Sulfurovum sp. NBC37-1] gi|151425619|dbj|BAF73122.1| RNA-metabolising metallo-beta-lactamase [Sulfurovum sp. NBC37-1] Length = 466 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 90/280 (32%), Gaps = 56/280 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + L+ I++DCG+ +++ + + + Sbjct: 8 GAAEVVTGSCHLFTIDGGPQ---ILVDCGMFQGQEEER-------NYGPFDFNPSEVDYL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR--------------------- 109 +THAH DH G + L +YA+ L E Sbjct: 58 LVTHAHLDHVGRIPKLVKEGFTGKIYATHATHDLAEIILLDSAKIMKEDFNTKYKKAQRQ 117 Query: 110 -VYERVSKKIP-------CISFQAGDKVDVGAFSIE-----SVRVNHSIPETMALVIRSP 156 E V + + F +F++E + R I + IR Sbjct: 118 GKEEGVMEPLYAEADVEDVFEFGWHYPEYDKSFTLEDGIEITYRDAGHILGAAFIEIRYK 177 Query: 157 VGNIVHTGDWKLD-DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKK 215 + HT + D + + D L +ST R+ + E + + Sbjct: 178 ENGVDHTIVFSGDIGNDTEIVMKDLA-----PCTHADYLYVESTYGDRDHQGV-EDTVTE 231 Query: 216 NIYDIMKNAK--GCVLVTTFSSSVSRIRSIIDIAEQIGRK 253 I+K K G V++ +F+ V R + ++ I +Q+ R+ Sbjct: 232 FKSVIIKTMKDWGNVIIPSFA--VERTQELLCILKQMHRR 269 >gi|146283202|ref|YP_001173355.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501] gi|145571407|gb|ABP80513.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501] Length = 460 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 82/241 (34%), Gaps = 48/241 (19%) Query: 30 SSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 ++IDCG F DD G D + D + + + A+ +TH H DH G + +L Sbjct: 2 DENSSVLIDCG-QFQGDDEAGHEDELALDFS-----VEGVKALIVTHVHIDHVGRIPNLL 55 Query: 89 SF-LHVPVYASPFAIGLL---------------EAKRVYERVSKKIPCISFQAGDKVDVG 132 + P+ S + LL + + + I+ + Sbjct: 56 AAGFDGPILCSEPSARLLPIVLEDAFRLSISRDQDQLERYLKVVEQRIIALPYDHWFTLN 115 Query: 133 A-----FSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSL 183 + H + + + + +V +GD +L D Sbjct: 116 ETDGRACKVRLQPAGH-VLGSAYVELELSEGSDVQRVVFSGDLGAPHSPLL---PDL--- 168 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRI 240 + E L+ +ST R + + ++ + ++ A +G VL+ +FS + R Sbjct: 169 --VPPERADLLILESTYGDRRHEDRAHR--RERLQAAIERALADQGTVLIPSFS--IGRT 222 Query: 241 R 241 + Sbjct: 223 Q 223 >gi|330999269|ref|ZP_08322986.1| metallo-beta-lactamase domain protein [Parasutterella excrementihominis YIT 11859] gi|329575127|gb|EGG56678.1| metallo-beta-lactamase domain protein [Parasutterella excrementihominis YIT 11859] Length = 208 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 53/161 (32%), Gaps = 23/161 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLG + N L Y + + ID G D PG ++ + Sbjct: 7 VAVFPLGPLE---TNCYLVSY----EGQAVAIDVG----GDPAPGSK-------YLKEHG 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-----KKIPC 120 L AI ITH H DH + L + H VY + S K Sbjct: 49 LELKAICITHMHFDHLYGVAALAAETHATVYTPEKDKVIASTVLGQGGSSGFPAVPKFES 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 +S + G+K + + + V P ++A + V Sbjct: 109 VSIEPGNKTEFAGLECKVLSVPGHTPGSVAYYFKKEKCVFV 149 >gi|158290010|ref|XP_311587.4| AGAP010353-PA [Anopheles gambiae str. PEST] gi|157018434|gb|EAA07248.4| AGAP010353-PA [Anopheles gambiae str. PEST] Length = 689 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 111/340 (32%), Gaps = 59/340 (17%) Query: 64 ERKNLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + F+TH H DH G L P+ S L++A + Sbjct: 287 RYGDIEGVTHYFLTHFHADHYIG----LKKTFSKPLIMSSITARLVKAFI----NVAEEF 338 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVT 178 + + + I ++ NH P + + R P N++HTGD++ + Sbjct: 339 YQIVELHQSIVIDDVEIIALDANH-CPGGIMFLFRLPNGSNVLHTGDFRASPEM------ 391 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-IKKNIYDIMKNAKGCV----LVTTF 233 + N I + D+T + S+ + + K + L+ Sbjct: 392 --EEYPEFWNFQIDIIYLDTTYLSSKYAFKSQWESVADARETVSAYLKKHIGVKVLIVCG 449 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGS--SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S + + + +++A G K+ + + ++ + + ++ D + Sbjct: 450 SYLIGKEKVWLELAISTGMKVWTEPNRWKALKAIADSQQLSVLVADPNKANIH------- 502 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 ++ + S E + Q + + G E N + Sbjct: 503 --VLAMNKLSYDELNEYMNQFPDRYESVIAIRP-----------SGWEK------NSKPQ 543 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 R+ E S H ++LKR Q++RP +++ Sbjct: 544 YRGRINIVGIEY----SEHSSFDELKRFVQFLRPHEVIST 579 >gi|322805424|emb|CBZ02988.1| metallo-beta-lactamase family protein,RNA-specific [Clostridium botulinum H04402 065] Length = 502 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 84/519 (16%), Positives = 162/519 (31%), Gaps = 102/519 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEGDK----NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG---------------------------------AFSIESVRVNHSIPETM 149 ++ ++ G I + H + + Sbjct: 108 WKNRKRIRSGLPPIEPLYTLKTAQMSTSLFEGYNYDEYIEIFSNLKIRFLDSGHLLGSAI 167 Query: 150 A-LVIRSPV--GNIVHTGDWKLDDDAILGDVTDKDSLCA-IGNEGILALMCDSTNAMREG 205 L I IV++GD T+ L + + ++ ++T R Sbjct: 168 TELYITENDKEFKIVYSGDLGN---------TNLPILKDPVQVDYADYVLMETTYGNRLH 218 Query: 206 TCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVL 256 I+ + K + I+K+ KG V++ +F+ V R + +I + V Sbjct: 219 DNINSQ--LKQLIHIVKDTFKRKGNVIIPSFA--VGRTQEVIYALNKYVESNILKNIKVY 274 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG- 315 + S L + + D+ G P E + T S E L ++ G Sbjct: 275 VDSPLASEATKIFNEYTTDFDEDAQKLLKEGDNPLEFNGLYFTNSPQESME-LNKIKTGA 333 Query: 316 ---------------EMRNVKLAEKDT----VIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 L K+ V + + G ++ G K +L + + V Sbjct: 334 IIISASGMCEAGRIRHHLKHNLWRKECSIVFVGYQAEGTLGQKILSGAKKIKLFGEEIAV 393 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 AE P +SGH N L + +P+ ++ IHGE K L +++ Sbjct: 394 NAEIYNLP-SLSGHADKNGLLNWLENFKEKPKEVILIHGEKGSRDYFKNLLIEKNYNTFC 452 Query: 415 PVRNGKMLRLFPDPIEIIDE-VVHGLFLKDGFLIGKFAD 452 P + ++ + + VV + Sbjct: 453 P----NIGDIYSSEFKGQRKSVVKNKITNLLNSLEDIDS 487 >gi|304436421|ref|ZP_07396396.1| metallo-beta-lactamase superfamily protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370585|gb|EFM24235.1| metallo-beta-lactamase superfamily protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 247 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 18/167 (10%) Query: 28 SPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 ++ID G+S + + P + + AI +TH H DH L Sbjct: 13 IELDGVRLLIDAGISAARITKALRANEIDP---------QTIDAILLTHEHIDHVRGLKT 63 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 L H+P+ A+ + + VG +I ++H Sbjct: 64 LSKQYHLPILATRGTLAGI-------DGGAVFAEDMHCVSGDFCVGDVTIHPFPISHDAA 116 Query: 147 ETMALVIRSPVGNIVHTG-DWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + + T D + D A + +L Sbjct: 117 DPCGFRVEGSYCCTLATDLGVVTDTVQEAMEGADVLVFEANHDTDLL 163 >gi|89897933|ref|YP_515043.1| beta-lactamase superfamily metal dependent hydrolase [Chlamydophila felis Fe/C-56] gi|89331305|dbj|BAE80898.1| metal dependent hydrolase of the beta-lactamase superfamily I [Chlamydophila felis Fe/C-56] Length = 262 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 71/237 (29%), Gaps = 29/237 (12%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIMKER 65 F PL G G N A G + I+ID G+S L +++ Sbjct: 4 FFPL-ASGSKG-NCAYLG----TDSCKILIDLGISKQQVTQGLLSMNV----------HP 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +++ AIF++H H DH + + P+ + + F Sbjct: 48 EDIHAIFVSHEHSDHISGIKSFIKAYNTPIICNLETARSICQLLDVH-----PTFKIFST 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 G I++ + H + + + + D I ++ D D L Sbjct: 103 GTIFSFCDLKIQTFNLPHDAVDPVGFIFYYRGEKLGFCSDLGWVTSWIAHELYDCDYLLI 162 Query: 186 IGNEGILALMCDS------TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 N + S + + IS + + I+ + + SS Sbjct: 163 EANHDPELVRQSSRPDIYKKRVLSKLGHISNHECGELLQKILTPKIKKIYLAHLSSE 219 >gi|12383082|ref|NP_073747.1| 5' exonuclease Apollo [Homo sapiens] gi|73620756|sp|Q9H816|DCR1B_HUMAN RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link repair 1B protein; AltName: Full=SNM1 homolog B; Short=SNMIB; Short=hSNM1B gi|10436338|dbj|BAB14807.1| unnamed protein product [Homo sapiens] gi|20987357|gb|AAH29687.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|56204942|emb|CAI19076.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|56553109|gb|AAV97812.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo sapiens] gi|119576986|gb|EAW56582.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|325463825|gb|ADZ15683.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [synthetic construct] Length = 532 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 96/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I SS + S Sbjct: 246 -----NQTHPTIAILPTSRKIHSSHP--------------------------DIHVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRAFVAALKPCQVVPI 297 >gi|332968159|gb|EGK07241.1| metallo-beta-lactamase [Desmospora sp. 8437] Length = 288 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 21/159 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHA 76 N+ L G W+++D G +PG DI K AI +TH Sbjct: 45 NVVLVG-NPDPGDHWVLVDTG-------MPGTANRIVDIA--EKRFGENSPPQAIILTHG 94 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC------ISFQAGDKVD 130 H DH G + DL VPVYA + L K Y + + V+ Sbjct: 95 HFDHVGTVVDLVEKWGVPVYAHEAELPFLTGKLSYPEPDGSVEGGLVAKLSPMFPNEPVN 154 Query: 131 VGAFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKL 168 +G+ + ++ + SIP I +P H ++ Sbjct: 155 LGS-HVTALPGDGSIPHMSGWRWIHTPGHTPGHISLFRD 192 >gi|213427089|ref|ZP_03359839.1| hypothetical protein SentesTyphi_16650 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 77 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 269 IDVGIIK-KDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 ID+G IK F+ YP +++++ TGSQGEP +AL++++ G R V+L DT Sbjct: 1 IDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTGSQGEPMAALSRIANGTHRQVQLQPGDT 60 Query: 328 VIFSSRAIPGN 338 VIFSS IPGN Sbjct: 61 VIFSSSPIPGN 71 >gi|55587856|ref|XP_524804.1| PREDICTED: 5' exonuclease Apollo [Pan troglodytes] Length = 532 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 96/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I SS + S Sbjct: 246 -----NQTHPTIAILPTSRKIHSSHP--------------------------DIHVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRAFVAALKPCQVVPI 297 >gi|304382015|ref|ZP_07364568.1| metallo-beta-lactamase superfamily protein [Prevotella marshii DSM 16973] gi|304336813|gb|EFM03036.1| metallo-beta-lactamase superfamily protein [Prevotella marshii DSM 16973] Length = 267 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N Y + ++ ++ID G+ G+ + Sbjct: 2 LKFISFG-SGSCG-NC----YYLYTEKEGLLIDAGI--------GLRTLKKRFQDYGLRL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ I ITH H DH ++ L + +PVY++ ++ ++ + Sbjct: 48 SDIHYILITHDHTDHVKSVGTLSADYSLPVYSTEKVHEGIKNNHYLKKHVAPEYTHIIEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 +G F++ + H + + ++ D Sbjct: 108 NRSFRLGEFTVTPFEIPHDSSDNVGYRVQHGDVVFCLMTDIG 149 >gi|297531138|ref|YP_003672413.1| beta-lactamase [Geobacillus sp. C56-T3] gi|297254390|gb|ADI27836.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] Length = 244 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 40/245 (16%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---YG 82 Y ++++DCG G + T + NL A+ I+H H DH G Sbjct: 22 YLFEHDGFFLLVDCGS--------GALAKLQNYTAVE----NLDAVIISHYHYDHIADIG 69 Query: 83 ALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 L + L P+Y ++ + + +++ + VG F Sbjct: 70 PLQYARLIHKNLGADLPVLPIYGHMEDEA-AFSRLTHSGI---TEGMAYDPNGTLAVGPF 125 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 SI ++ H P A+ I + +V+T D + + +G L Sbjct: 126 SITFMKTVHPAP-CYAMRITAGGKTVVYTADSSYIPEFLPF------------AKGADLL 172 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKI 254 +C+ + + + I + A+ L T V R +++ A + R + Sbjct: 173 ICECNFYAGQNAAPAGHMTSEEAAAIAEGARVGELWLTHLPHVGRHEQLVEEAGRTFRGV 232 Query: 255 VLLGS 259 + L Sbjct: 233 IRLAR 237 >gi|82659698|gb|ABB88926.1| PsoR [Fremyella diplosiphon] Length = 554 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 65/433 (15%), Positives = 145/433 (33%), Gaps = 65/433 (15%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN----------LMA 70 + G I++DCG+ DI+ ++K KN Sbjct: 34 CLVVRMGPYR----ILLDCGLG--------------DISLLVKGLKNSARQRHLPLPADL 75 Query: 71 IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDK 128 + I+HAH DH G L +F ++P+YAS LL + + + C + Sbjct: 76 VLISHAHPDHARGLLQLHQAFPNLPIYASEVTSKLLSLNWLNQDLKSIPQFCQALPLRSP 135 Query: 129 VDVG-AFSIESVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V+ E H +P +A+++ +++TGD+ L + ++ + L Sbjct: 136 VEFKEGLVAELFPAGH-LPGAVAILLTYTSQRRTYRLLYTGDFFLSNSRLVEGL----RL 190 Query: 184 CAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + AL+ ++T E + + I+ + + VL+ T + + + Sbjct: 191 EELRGLDLDALIIEATYGTSRHPHRRNQENQLAERIHRAIAE-RCSVLLPTPALGLGQEL 249 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 ++ + G L V A+ G +L + + + + Sbjct: 250 LMLLRSHHH-----FTGRDLDIWVDGAVATGCDAYLELLPHLPA-SVQNFARHQPLFWDE 303 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI----------KNRLVE 351 + PR + + E R + + ++ + ++ + + Sbjct: 304 RVRPR---VRRLQAEHR-PNIGKSPCIVLTDSTADFSQYCQADTGPWLILLPEKIDIKTK 359 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIA 411 + + + H ++ +RPQ ++ +HG P +L L + Sbjct: 360 KQYPAPTTIESYLL--AQHSDGPGTTQLIHNLRPQHVIFVHGSPAYLADLTGLEELQNRY 417 Query: 412 CVPPVRNGKMLRL 424 + G ++ L Sbjct: 418 HLHSPAAGVLVEL 430 >gi|300933206|ref|ZP_07148462.1| hypothetical protein CresD4_04005 [Corynebacterium resistens DSM 45100] Length = 222 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 26/159 (16%) Query: 8 FLPL-GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L GG ++ N+ + G + +ID + P +D V + Sbjct: 27 VFALDGGEWDVDNNIWILG----DDSECYVIDA----AHNAQPIIDAV---------GDR 69 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I +HAH DH +L L P++ P K +++ ++ G Sbjct: 70 KVKGIICSHAHNDHITVAPELSEKLDAPIFCHPG------DKMLWDETHPEVTPHDLADG 123 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 K V ++ + P + + + P ++ +GD Sbjct: 124 QKFAVSGTELKVINTPGHSPGSCSFYL--PEAKVLFSGD 160 >gi|332237717|ref|XP_003268053.1| PREDICTED: 5' exonuclease Apollo [Nomascus leucogenys] Length = 531 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 96/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I SS + S Sbjct: 246 -----NQTHPTIAILPTSRKIHSSHP--------------------------DIHVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRAFVAALKPCQVVPI 297 >gi|238504410|ref|XP_002383436.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|220690907|gb|EED47256.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 333 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 11/187 (5%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 ++ ++ID +D++ + + P + + + ITH H DHYG L Sbjct: 107 TTEGIVLID--TLDNEDEIKAI--LLPGLQSFGLNGSEIKHVIITHEHADHYGGAKYLQD 162 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 VYAS A + A GD + VG V P + Sbjct: 163 TFKPAVYASELAWKSMAAMGKNATPPVPTKDRILADGDNLSVGGVDFHIVLTPGHTPGCL 222 Query: 150 ALVIRSPVGNIVHTGDWK------LDDDAILGDVTDKDSLCAIGN-EGILALMCDSTNAM 202 +L+ H D + + + I G+ L+ + A Sbjct: 223 SLIFPVSDQGRQHMAGLSGGTGTPADAASREQKIRSQYKFADICQGRGVDVLLSNHQVAD 282 Query: 203 REGTCIS 209 Sbjct: 283 HALFHAD 289 >gi|311069081|ref|YP_003974004.1| putative metal-binding hydrolase [Bacillus atrophaeus 1942] gi|310869598|gb|ADP33073.1| putative metal-binding hydrolase [Bacillus atrophaeus 1942] Length = 212 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 15/113 (13%) Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP-----FA------IGLLEA 107 +I ++ +AI +THAH DH GAL D+ ++PVY GLL Sbjct: 39 RYIKEKGLKPLAILLTHAHFDHIGALDDVRDKWNIPVYLHQKEKEWLTDSSLNGSGLLRG 98 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 V+ K + ++++G F +E++ P +++ +R I Sbjct: 99 ----IEVTAKPADHLIEGDGELNIGPFHLETLFTPGHSPGSVSYYVRDADLVI 147 >gi|163846959|ref|YP_001635003.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524779|ref|YP_002569250.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668248|gb|ABY34614.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448658|gb|ACM52924.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 250 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 26/120 (21%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGAL----HDLW 88 I+ID G PD + + + A+ +THAH DH L Sbjct: 47 ILIDAG---------------PDFRIQALNAGLRRIDAVLLTHAHFDHVAGLDDLRPFCL 91 Query: 89 SFLHVPVYASPFAIGLLEAKRVYE-----RVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 +PV+ S + + + Y + S + + +G ++ + V H Sbjct: 92 RQGSLPVFGSARTLADVRQRFAYAFDDTSQGSSRPSITLHAVEEPFQIGPLTVVPIAVPH 151 >gi|196248908|ref|ZP_03147608.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|196211784|gb|EDY06543.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 210 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 22/158 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG I N L +++D G G LV + +++ +AI + Sbjct: 8 VGPIQANAYLLS---AEDGSCVIVDPGAE-------GAVLV----RRMEEKQLTPLAILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAI------GLLEAKRVYERVSKKIPCISFQAGD 127 THAH DH G + D+ + VPVY L + V + Sbjct: 54 THAHFDHIGGIPDVLARWDVPVYLHENEKQWLQDPALNSSLYFGAPVVVRCEPTCIAGRT 113 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +G F + P +++ IV +GD Sbjct: 114 TLTIGPFVFDVRETPGHSPGSVSYY--CEAAQIVFSGD 149 >gi|59711863|ref|YP_204639.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio fischeri ES114] gi|59479964|gb|AAW85751.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio fischeri ES114] Length = 330 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 76/223 (34%), Gaps = 41/223 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGV--DLVFPDIT------F 60 GG+ + N+ + S + ++M+D G + G D+ PD + + Sbjct: 34 GGIQD--GNLTAFLIKSEADSNFVMLDAGSVVNGLIVSEQKGAFKDITVPDSSPYTKVGY 91 Query: 61 IMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFA-IGLLEAKRV----- 110 ++ + + FI+HAH DH L D P+Y L++ Sbjct: 92 LL--KDKIKGYFISHAHLDHVAGLIISSPDDSKK---PIYGLAATNKDLMKNYFNWSAWP 146 Query: 111 ------YERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV- 161 K + Q + S+ S+ ++HS ++ +++ G++ Sbjct: 147 NFGNKGEGFKLNKYNYVDLQPGVWSPIAETTMSVMSLPLSHSGGQSTVFILKDSEGDVFA 206 Query: 162 HTGDWKLDD----DAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + GD D+ A+ + G + + TN Sbjct: 207 YFGDTGPDEVEKSSAMKTAWSALAPFVKQGKLKGIIIEVSFTN 249 >gi|332665473|ref|YP_004448261.1| RNA-metabolising metallo-beta-lactamase [Haliscomenobacter hydrossis DSM 1100] gi|332334287|gb|AEE51388.1| RNA-metabolising metallo-beta-lactamase [Haliscomenobacter hydrossis DSM 1100] Length = 469 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 66/486 (13%), Positives = 141/486 (29%), Gaps = 92/486 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI--TFI 61 ++ F G E+ + L + I++DCG+ G D D ++ Sbjct: 1 MKIKFC--GAAREVTGSCHLI---TLEDGYKILLDCGL------YQGSDKNLEDFNSRWL 49 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFA----------IGLLEAKRV 110 + + + ++HAH DH G + L ++A+ +++ + V Sbjct: 50 FDPAE-IDCLVLSHAHIDHAGRIPKLVKDGFRGAIHATHATRSLSSLMLLDSAMIQEREV 108 Query: 111 YERVSKKIPCIS-------------------------FQAGDKVDVGAFSIESVRVNHSI 145 + ++ + + DV R I Sbjct: 109 EYKNKRRSKNHNFDDIAYDEPIYTSKDVHATMELFISYPYEKWFDVHPKVKVMFRDAGHI 168 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMRE 204 + ++ ++ V + D + D + + L+C+ST R Sbjct: 169 LGSASVSLKIEENGKVINFGFSGDVGRPHRPILRDP-----LPMPEMDYLICESTYGDRT 223 Query: 205 GTCISEKG--IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ------------- 249 + + I G +L+ FS V R + I+ I ++ Sbjct: 224 HEDAPAETDHFLRIIKQTCIEKGGKLLIPAFS--VGRTQEIVYILDKMANEDLLPRIPVY 281 Query: 250 ------------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 G L +++ + + E + I Sbjct: 282 VDSPLAVNATTIYGSHPECFDEELSDYMAIDENPFGFNGLRYVRKTEDSKKLNYSKEACI 341 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI--FSSRAIPGNEVAIGHIKNRLVEQGVR 355 S G + ++ + +I +++ P ++ IG + +L + + Sbjct: 342 IIASSG--MANAGRIKHHLYHGINDPNNTVLIVGYAAPYTPAGQLRIGAKEIKLFGEFIA 399 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKELALQEGIACV 413 V A+ S H +L + R + + HG+ + + L L G A V Sbjct: 400 VRADVEIMDSF-SAHADKLELVEFLRNQRESVKKIFLTHGDYEVQKSFRGLLLSVGFADV 458 Query: 414 PPVRNG 419 G Sbjct: 459 EIPALG 464 >gi|109947289|ref|YP_664517.1| hypothetical protein Hac_0716 [Helicobacter acinonychis str. Sheeba] gi|109714510|emb|CAJ99518.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 205 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA I + Sbjct: 23 GIDFIIDPGFSSSKWVLENAKNPKAILITHGHYDHVWDSAQLSKILKDTPIYAPKDDIFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPIFSPTFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|20807652|ref|NP_622823.1| Zn-dependent hydrolase, including glyoxylases [Thermoanaerobacter tengcongensis MB4] gi|20516197|gb|AAM24427.1| Zn-dependent hydrolases, including glyoxylases [Thermoanaerobacter tengcongensis MB4] Length = 214 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 25/185 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N+ + +R+ I+ID G + + +I + + I +TH H Sbjct: 17 GANLYVV--WDRDTREGIIIDPGEVYDEIK-----------NYIKENGIKVKHILLTHGH 63 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + ++ +F V S +L + V+++V I + D + Sbjct: 64 FDHIGGVEEIRAFTGGKVAISEEDAPMLLDPSQNLSEMVFKKVICSPADIILKDKDVLGF 123 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G + +E + ++ I + TGD + ++L A E Sbjct: 124 GNYYVEVISTPGHTKGSVCFKIGD----VYFTGDTLFRGSIGRHDFPGGNFETLMASIKE 179 Query: 190 GILAL 194 +L L Sbjct: 180 RLLTL 184 >gi|29375772|ref|NP_814926.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227518451|ref|ZP_03948500.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227552981|ref|ZP_03983030.1| beta-lactamase [Enterococcus faecalis HH22] gi|229546125|ref|ZP_04434850.1| beta-lactamase [Enterococcus faecalis TX1322] gi|229550314|ref|ZP_04439039.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|255973086|ref|ZP_05423672.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255976125|ref|ZP_05426711.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256618780|ref|ZP_05475626.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256762200|ref|ZP_05502780.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256852845|ref|ZP_05558215.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256958689|ref|ZP_05562860.1| vicX protein [Enterococcus faecalis DS5] gi|256962213|ref|ZP_05566384.1| vicX protein [Enterococcus faecalis Merz96] gi|256965403|ref|ZP_05569574.1| MicC [Enterococcus faecalis HIP11704] gi|257077957|ref|ZP_05572318.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|257082846|ref|ZP_05577207.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|257085544|ref|ZP_05579905.1| vicX protein [Enterococcus faecalis Fly1] gi|257086550|ref|ZP_05580911.1| VicX protein [Enterococcus faecalis D6] gi|257089607|ref|ZP_05583968.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415814|ref|ZP_05592808.1| vicX protein [Enterococcus faecalis AR01/DG] gi|257419023|ref|ZP_05596017.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257422892|ref|ZP_05599882.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|293383240|ref|ZP_06629156.1| VicX protein [Enterococcus faecalis R712] gi|293387605|ref|ZP_06632151.1| VicX protein [Enterococcus faecalis S613] gi|294781112|ref|ZP_06746462.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|300859771|ref|ZP_07105859.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|307268691|ref|ZP_07550060.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|307273516|ref|ZP_07554759.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|307274479|ref|ZP_07555662.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|307279015|ref|ZP_07560073.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|307288502|ref|ZP_07568488.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|307291180|ref|ZP_07571065.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|312899668|ref|ZP_07758992.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|312903947|ref|ZP_07763116.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|312907172|ref|ZP_07766163.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|312909791|ref|ZP_07768639.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|312951042|ref|ZP_07769950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|29343233|gb|AAO80996.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227074129|gb|EEI12092.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227177890|gb|EEI58862.1| beta-lactamase [Enterococcus faecalis HH22] gi|229304577|gb|EEN70573.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|229308649|gb|EEN74636.1| beta-lactamase [Enterococcus faecalis TX1322] gi|255964104|gb|EET96580.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255968997|gb|EET99619.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256598307|gb|EEU17483.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256683451|gb|EEU23146.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256711304|gb|EEU26342.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256949185|gb|EEU65817.1| vicX protein [Enterococcus faecalis DS5] gi|256952709|gb|EEU69341.1| vicX protein [Enterococcus faecalis Merz96] gi|256955899|gb|EEU72531.1| MicC [Enterococcus faecalis HIP11704] gi|256985987|gb|EEU73289.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|256990876|gb|EEU78178.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|256993574|gb|EEU80876.1| vicX protein [Enterococcus faecalis Fly1] gi|256994580|gb|EEU81882.1| VicX protein [Enterococcus faecalis D6] gi|256998419|gb|EEU84939.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157642|gb|EEU87602.1| vicX protein [Enterococcus faecalis ARO1/DG] gi|257160851|gb|EEU90811.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257164716|gb|EEU94676.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|291079418|gb|EFE16782.1| VicX protein [Enterococcus faecalis R712] gi|291082937|gb|EFE19900.1| VicX protein [Enterococcus faecalis S613] gi|294451790|gb|EFG20242.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|295112755|emb|CBL31392.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Enterococcus sp. 7L76] gi|300850589|gb|EFK78338.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|306497834|gb|EFM67366.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|306500577|gb|EFM69908.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|306504140|gb|EFM73352.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|306508873|gb|EFM77960.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|306509793|gb|EFM78820.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|306515003|gb|EFM83549.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|310626200|gb|EFQ09483.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|310630997|gb|EFQ14280.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|310632667|gb|EFQ15950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|311289749|gb|EFQ68305.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|311293174|gb|EFQ71730.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|315027750|gb|EFT39682.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2137] gi|315029158|gb|EFT41090.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4000] gi|315031525|gb|EFT43457.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0017] gi|315035059|gb|EFT46991.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0027] gi|315145508|gb|EFT89524.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2141] gi|315147679|gb|EFT91695.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4244] gi|315151381|gb|EFT95397.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0012] gi|315154079|gb|EFT98095.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0031] gi|315157366|gb|EFU01383.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0043] gi|315158429|gb|EFU02446.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0312] gi|315162571|gb|EFU06588.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0645] gi|315165414|gb|EFU09431.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1302] gi|315166592|gb|EFU10609.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1341] gi|315169879|gb|EFU13896.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1342] gi|315172770|gb|EFU16787.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1346] gi|315575744|gb|EFU87935.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309B] gi|315578296|gb|EFU90487.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0630] gi|315579812|gb|EFU92003.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309A] gi|323480430|gb|ADX79869.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] gi|327534822|gb|AEA93656.1| beta-lactamase [Enterococcus faecalis OG1RF] Length = 268 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 +++K +++D G+S K ++ ++ ++L AI +TH H DH + L Sbjct: 23 IETNQKKVLVDAGLSGKKITSLLAEV--------NRKPEDLDAILVTHEHRDHIHGVGVL 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + VYA+ ++ F+ G + +G IES V+H Sbjct: 75 ARKYKLDVYANEKTWQAMDPMI---GKVDVAQKHIFEMGKVLTLGDMDIESFGVSHDAIA 131 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D + D Sbjct: 132 PQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENAD 165 >gi|297664011|ref|XP_002810450.1| PREDICTED: DNA cross-link repair 1B protein-like [Pongo abelii] Length = 532 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 95/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I SS + S Sbjct: 246 -----NQTHPTIAILPTSRKIHSSHP--------------------------DIHVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L ++P +V I Sbjct: 275 DHSSYSELCAFVAALKPCQVVPI 297 >gi|329576536|gb|EGG58043.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1467] Length = 268 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 +++K +++D G+S K ++ ++ ++L AI +TH H DH + L Sbjct: 23 IETNQKKVLVDAGLSGKKITSLLAEV--------NRKPEDLDAILVTHEHRDHIHGVGVL 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + VYA+ ++ F+ G + +G IES V+H Sbjct: 75 ARKYKLDVYANEKTWQAMDPMI---GKVDVAQKHIFEMGKVLTLGDMDIESFGVSHDAIA 131 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D + D Sbjct: 132 PQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENAD 165 >gi|226313456|ref|YP_002773350.1| hypothetical protein BBR47_38690 [Brevibacillus brevis NBRC 100599] gi|226096404|dbj|BAH44846.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 214 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 26/158 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 LG N + + ++ + I+ID G+ + D + + KN+ Sbjct: 10 YALGAFQ---TNAYVV--TNTATNQTIVIDPGM---EPDQL--------LRALAN--KNV 51 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG------LLEAKRVY--ERVSKKIPC 120 +AI +THAH DH G L+ + PVY P L ++R E + + Sbjct: 52 VAILLTHAHLDHIGGLNQVRELTKAPVYIHPLEQEWLTNPDLNGSRRWNLPELIICERAE 111 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 + G +++ F I+ + P + + VI Sbjct: 112 HELEDGQTLELAGFHIQVLHTPGHSPGSCSFVIGQHCF 149 >gi|254779214|ref|YP_003057319.1| putative hydrolase [Helicobacter pylori B38] gi|254001125|emb|CAX29080.1| Putative hydrolase [Helicobacter pylori B38] Length = 205 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKALKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPTFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|168703778|ref|ZP_02736055.1| beta-lactamase domain protein [Gemmata obscuriglobus UQM 2246] Length = 300 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L G + R W+++D G+S + + R AI +TH H D Sbjct: 16 NAYLIGPPLATDRGWVLVDAGLSISRAAIVAA------AAAAFGPRSRPAAIVLTHGHFD 69 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G++ L PVYA P Sbjct: 70 HVGSVKALAELWDAPVYAHPL 90 >gi|161506709|ref|YP_001576659.1| hypothetical protein lhv_0099 [Lactobacillus helveticus DPC 4571] gi|160347698|gb|ABX26372.1| hypothetical protein lhv_0099 [Lactobacillus helveticus DPC 4571] gi|323465652|gb|ADX69339.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus H10] Length = 265 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 18/166 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N +L G + I++D G+S K VD+ DI Sbjct: 1 MKVSVLASGSTG----NTSLIETG----QHKILMDAGLSGKKTKQLLVDVGV-DI----- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ F++H H DH G L L + +A+ L + ++ + + Sbjct: 47 --NDIDMAFLSHDHTDHSGGLGVLMRRYPKIDAFANSGTWQYLLDTQKIGKLPAE-QMNT 103 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + G G + + +H + V S I D Sbjct: 104 IEPGQTKTFGDLDVTAFATSHDAAQPQYYVFTSGGKRIAFLTDTGY 149 >gi|325678959|ref|ZP_08158557.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] gi|324109463|gb|EGC03681.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] Length = 261 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 12/128 (9%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 I+ID GVS + D E K + AIFITH H DH L L Sbjct: 20 DENSGILIDAGVSCKRIVTSLADRGI--------ESKAVQAIFITHTHSDHITGLKVLSK 71 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 L VPVY+ + +L ++VS I V VG F + + H P + Sbjct: 72 KLGVPVYSLRGNLEILAR---NDKVSAASDLIEMNDR-PVQVGGFEVTAFDTPHDTPVSC 127 Query: 150 ALVIRSPV 157 +P Sbjct: 128 GFRATAPD 135 >gi|171321929|ref|ZP_02910819.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] gi|171092776|gb|EDT38050.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + G+D Sbjct: 1 MRFASLGSGSE--GNALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI +TH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILVTHEHSDHVGSALTLARRGSLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|170699300|ref|ZP_02890349.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] gi|170135792|gb|EDT04071.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + G+D Sbjct: 1 MRFASLGSGSE--GNALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI +TH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILVTHEHSDHVGSALTLARRGSLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|172061048|ref|YP_001808700.1| beta-lactamase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993565|gb|ACB64484.1| beta-lactamase domain protein [Burkholderia ambifaria MC40-6] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + G+D Sbjct: 1 MRFASLGSGSE--GNALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI +TH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILVTHEHSDHVGSALTLARRGSLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|115352181|ref|YP_774020.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115282169|gb|ABI87686.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + G+D Sbjct: 1 MRFASLGSGSE--GNALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGID------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI +TH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILVTHEHSDHVGSALTLARRGSLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|73949006|ref|XP_544251.2| PREDICTED: similar to Artemis protein (DNA cross-link repair 1C protein) (SNM1-like protein) (A-SCID protein) (hSNM1C) isoform 1 [Canis familiaris] Length = 693 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 47/342 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSF----LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V +Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPALKRRLECSLKVRLYCSPVTKELLLTSPRYRFWEKRIISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD+++ Sbjct: 87 IETPTQIPLVDEASGEKEDIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRMAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEK-GIKKNIYDIMKNAKGCVL 229 + + + G I ++ D+T + I + + I +++++ Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLRGISELVRSW----- 193 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 +T V ++ G + + S + V + V + + Sbjct: 194 ITRSPYHVV----WLNCKAAYGYEYLFTNLSEEFGVQI--HVDKLDMFRNMPDILHHLTT 247 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 R I + E +L G + ++ I S G ++ Sbjct: 248 DRNTQIHACRHPKAEEYFHWNKLPCGAISKNRIPLHTISIKPSTMWFGERTRKTNVI--- 304 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P + Sbjct: 305 ------VRTGESSYRACFSFHSSYSEIKDFLNYICPVNVYPN 340 >gi|125974812|ref|YP_001038722.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|256004931|ref|ZP_05429904.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281418734|ref|ZP_06249753.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|125715037|gb|ABN53529.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|255991111|gb|EEU01220.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281407818|gb|EFB38077.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|316941932|gb|ADU75966.1| beta-lactamase domain protein [Clostridium thermocellum DSM 1313] Length = 263 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 11/142 (7%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + I+ID G+S G + ++ I ++ L AI ++H H DH Sbjct: 16 IFLSTGKTKILIDAGLS-------GKKITEALVS-IGEKPSELSAILVSHEHSDHIKGAG 67 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + VP+YA+ +E V K+ + + ++G I + H Sbjct: 68 IISRKYDVPIYANENTWAAMENLIGPVSVKNKMYFNTGRE---FEIGDVIINPFPIPHDA 124 Query: 146 PETMALVIRSPVGNIVHTGDWK 167 E + I D Sbjct: 125 VEPVGFNFFVENSKITTATDIG 146 >gi|110635857|ref|YP_676065.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110286841|gb|ABG64900.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 277 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 32/92 (34%) Query: 22 ALYGYGSPSSRKWIMIDCGVS-------------FPKDDLPGVDLVFPDITFIMKERKNL 68 + +G PSS+ W++ID GV+ F P Sbjct: 37 NVLFFGEPSSKDWVLIDTGVAGSAGAIQESAAARFGDGKPPS------------------ 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 AI +TH H DH GAL L +PVYA P Sbjct: 79 -AIVLTHGHFDHVGALQSLLHQWDIPVYAHPL 109 >gi|115616464|ref|XP_001202045.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115621310|ref|XP_796713.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 351 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 97/329 (29%), Gaps = 42/329 (12%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 A F++H H DHYG L +Y S L+ ++ + Sbjct: 17 KAYFLSHFHYDHYGG---LTKHFDQQLYCSKVTGNLVISRL----NVAAEYVKILPMNEP 69 Query: 129 VDVGAFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 V + + NH P + +HTGD++ D + + + Sbjct: 70 CKVDGVEVTLLEANH-CPGAVMFLYKLKSGVIYLHTGDFRAD--------AEMELYPQLS 120 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSII 244 + + L D+T + S+ + + I A L+ + ++ + + Sbjct: 121 SCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKIAVQAVKSNKKTLIVCATYTIGKEKVFR 180 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG--SQ 302 IAE + K+ + L + ++ D L L VIA + Sbjct: 181 AIAEALECKVYVDSRKL-------KVLECLEDDDLMSLLTRDNKTSACGLHVIAMNMLNH 233 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + + L+Q S + + + Sbjct: 234 QKLKEYLSQFSSRYDNILAFKPTGW-------------THSDKVESPSDIKPSKSGKSTI 280 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +++KR Q+I ++ Sbjct: 281 YGIPYSEHSSYSEMKRFVQFISADKILPT 309 >gi|295397618|ref|ZP_06807693.1| beta-lactamase family protein [Aerococcus viridans ATCC 11563] gi|294974081|gb|EFG49833.1| beta-lactamase family protein [Aerococcus viridans ATCC 11563] Length = 201 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 56/137 (40%), Gaps = 18/137 (13%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + ++ ++ID P D ++ + + + N +AI +THAH DH GA+ Sbjct: 17 FIVKGNKDTLIID-----PGDQTETIEQLIA------ENQLNPVAILLTHAHFDHIGAVE 65 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVS--KKIPCISFQAGDKVDVGAFSIESVRVNH 143 D+ ++ V+ ++EA + ++ + K + + V F+ ++ V Sbjct: 66 DIRERYNIDVW-----QHIIEADWLKDKQTRMPKTHTHYWDKMGQQSVAGFTFKTAHVPG 120 Query: 144 SIPETMALVIRSPVGNI 160 P ++ + + Sbjct: 121 HSPGSVVYIFEEDGFVV 137 >gi|169764357|ref|XP_001816650.1| hypothetical protein AOR_1_1286184 [Aspergillus oryzae RIB40] gi|83764504|dbj|BAE54648.1| unnamed protein product [Aspergillus oryzae] Length = 333 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 45/164 (27%), Gaps = 7/164 (4%) Query: 53 LVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 ++ P + + + ITH H DHYG L VYAS A + A Sbjct: 126 ILLPGLQSFGLNGSEIKHVIITHEHADHYGGAKYLQDTFKPAVYASELAWKSMAAMGKNA 185 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK----- 167 GD + VG V P ++L+ H Sbjct: 186 TPPVPTKDRILADGDNLSVGGVDFHIVLTPGHTPGCLSLIFPVSDQGRQHMAGLSGGTGT 245 Query: 168 -LDDDAILGDVTDKDSLCAIGN-EGILALMCDSTNAMREGTCIS 209 D + + + I G+ L+ + A Sbjct: 246 PADAASREQKIRSQYKFADICQGRGVDVLLSNHQVADHALFHAD 289 >gi|134296274|ref|YP_001120009.1| beta-lactamase domain-containing protein [Burkholderia vietnamiensis G4] gi|134139431|gb|ABO55174.1| beta-lactamase domain protein [Burkholderia vietnamiensis G4] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + GVD Sbjct: 1 MRFASLGSGSE--GNALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGVD------- 51 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI ITH H DH G+ L +P+Y S + A + Sbjct: 52 -------DLDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVIPYTVPHDAREPLQFVFMDGSRRLGVLTDVGM 147 >gi|331090617|ref|ZP_08339468.1| hypothetical protein HMPREF9477_00111 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401057|gb|EGG80652.1| hypothetical protein HMPREF9477_00111 [Lachnospiraceae bacterium 2_1_46FAA] Length = 535 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 76/291 (26%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L K I+IDCG+ PD + + Sbjct: 1 MKLTFI--GAAHEVTGSCHLLEAC----NKTILIDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY--ERV 114 ++ ++ + +THAH DH G + L + + L Sbjct: 41 NQELPIVPGDIDCVLLTHAHIDHSGLIPMLCKQGFKGQIVTTFATSDLCNIMLRDSAHIQ 100 Query: 115 SKKIPCISFQ------------------------------AGDKVDVGAFSIESVRVNHS 144 + + + S+ + H Sbjct: 101 EFEAEWRNRKARRAGAALYEPLYEMQDALDAIELLAPCDYDQKIELYDGISVRFTDIGH- 159 Query: 145 IPETMALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + + + I IV +GD + I+ D T + ++ +ST Sbjct: 160 LLGSACVEIWIREEGVEKKIVFSGDVGNINQPIIKDPTQV--------KEADYVVIESTY 211 Query: 201 AMREGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 R + I + I + G V++ +F+ V R + ++ + Sbjct: 212 GNRLHGEETPDYIGEFTRILNETFARGGNVVIPSFA--VGRTQELLYFIRE 260 >gi|289676519|ref|ZP_06497409.1| Beta-lactamase-like protein [Pseudomonas syringae pv. syringae FF5] Length = 252 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEITGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|237748730|ref|ZP_04579210.1| hydroxyacylglutathione hydrolase [Oxalobacter formigenes OXCC13] gi|229380092|gb|EEO30183.1| hydroxyacylglutathione hydrolase [Oxalobacter formigenes OXCC13] Length = 265 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 33/170 (19%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ +++D G + P + + K L AI +TH HEDH G + L Sbjct: 25 IDNRKEAVIVDPGEAGPV------------LAALQKRSLKLCAIVLTHRHEDHIGGVSRL 72 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI-SFQAGDKVDVGAFSIESVRVNHSIP 146 VPVY F + + + ++ + + V Sbjct: 73 LQEYSVPVYGPRF-----------DPIESVTQPVQEGDIVTIFELDNLQLSVLDVPGHTK 121 Query: 147 ETMALVIRSPVGNIVHTGDW-------KLDDDAILGDVTDKDSLCAIGNE 189 +A + + GD ++ + T L A+ ++ Sbjct: 122 GHIAYYAKKE--KWLFCGDMLFGAGCGRMFEGTPEQMWTSLSKLAALPDD 169 >gi|224011619|ref|XP_002295584.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583615|gb|ACI64301.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 352 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHYG + WS +Y S L+ + +R ++ Sbjct: 29 FLTHFHSDHYGGITKNWSE--GTIYCSLPTANLVNDQLGVDRRYLHPLPMNTPTIIASKG 86 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 ++ + NH P + + I+H GD++ + ++ + + + N + Sbjct: 87 TPITVTLLDANH-CPGAIMFLFEVGNKKILHVGDFRW-NSELMLRMPQLRAFSQL-NPRL 143 Query: 192 LALMCDSTNAMREGTCISE---------KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 + D+T + T ++ ++ + K L +++ + + + Sbjct: 144 DEIFLDTTYCNPKYTLPTQEEAIAAAIEVAEREVATAKREKTKTLFLFGSYT--IGKEKI 201 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + +AE++ K+ + + + ++ + ++ + P Q+ Sbjct: 202 YLSVAERLKLKVYVDKRRYRILSALEWPKERMNMFTTNKTESCLWVVPLGQVNFKQMREF 261 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 + + S R V S + ++ + + Sbjct: 262 MDEGNKNNVFSAPYGRVVGFRPTGWTYSSPKKST---KPFSTSPSKKSGRNLISTKTSGR 318 Query: 363 CPVH---VSGHPYPNDLKRMYQWIRPQVLVAI 391 VH S H +L + ++P+ ++A Sbjct: 319 YAVHGVPYSEHSSFPELVDCLRQLKPKKIIAT 350 >gi|205372860|ref|ZP_03225669.1| metal-dependent hydrolase [Bacillus coahuilensis m4-4] Length = 250 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 27/201 (13%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y I++DCG + +I L + ++H H DH + Sbjct: 28 YLLQCDDTSILLDCGSG-ALSHMQ---------EYI--NPLELDGLILSHYHADHVADVG 75 Query: 86 DLWSFLHVPVYASPF-----AIGLL---EAKRVYERVSKK--IPCISFQAGDKVDVGAFS 135 L + + + + E ++ ++R++ K + A V +G FS Sbjct: 76 VLQHAY---LIGNKLNNRNETLSIFGHNENEQEFQRLTYKGVTKGRPYDAHSSVTIGPFS 132 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAIGNEGILAL 194 I+ +R HS+P A+ + IV+T D I + D + G+ A Sbjct: 133 IQFLRTEHSVP-CFAMKVTCKGKVIVYTADSAYQPSFIPFAEYADLLLCESNFYVGMDAK 191 Query: 195 MCDSTNAMREGTCISEKGIKK 215 + G E +KK Sbjct: 192 SAGHMTSREAGFLALESKVKK 212 >gi|281424399|ref|ZP_06255312.1| VicX protein [Prevotella oris F0302] gi|281401668|gb|EFB32499.1| VicX protein [Prevotella oris F0302] Length = 290 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 14/167 (8%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K L F+ G G G N Y + ++ID GV G+ + Sbjct: 20 IKKIMLKFISFG-SGSSG-NC----YYLYTETDGLIIDAGV--------GIRTLKKHFKN 65 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 N+ + ITH H DH ++ L + VY + +E ++ + I Sbjct: 66 YGLHLDNVHHMLITHDHADHVKSVGSLSKDYGLDVYTTHSVHVGIEHNYFVKKKIEPIHV 125 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + G +G F + V H + + + V D Sbjct: 126 KIVEKGVTFKLGEFKVTPFGVPHDSSDNVGYKVCYGDVVFVLMTDIG 172 >gi|150390365|ref|YP_001320414.1| hypothetical protein Amet_2603 [Alkaliphilus metalliredigens QYMF] gi|149950227|gb|ABR48755.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 246 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 35/253 (13%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 N L + + ++++CG++F + G + + ++ +TH H Sbjct: 12 GNCYLLE----NKEETLILECGLTFKKIQEGLGYETI------------KVVGCLVTHEH 55 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 +DH ++ L + + VY S + L + + + +A +K+ VG F+I Sbjct: 56 KDHSKSIEQL-NKNGIDVYTSNGTMQAL-------GLKESYRLKAIKAQEKIRVGGFTIL 107 Query: 138 SVRVNHSIPETMALVIRSPVGN--IVHTGDWKLDD-----DAILGDVTDKDSLCAIGNEG 190 H E + +I+ + T + D I+ + K + E Sbjct: 108 PFDTQHDAEEPLGFLIQHQDMGKLLFITDSYYCKYKFKGLDHIMVECNYKKEILQQNIEK 167 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDI-MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L L C + + + +K+ + + N K VL+ S + + +I Sbjct: 168 GLVLECLKNRITKSHFEL--ENVKEFLRSSDLSNTKNIVLIHLSSQNSDKNLFKEEIERS 225 Query: 250 IGRKIVLLGSSLK 262 GR + + L+ Sbjct: 226 TGRPVYIGSKGLE 238 >gi|330502876|ref|YP_004379745.1| beta-lactamase domain-containing protein [Pseudomonas mendocina NK-01] gi|328917162|gb|AEB57993.1| beta-lactamase domain-containing protein [Pseudomonas mendocina NK-01] Length = 474 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 46/251 (18%) Query: 30 SSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 S +++DCG+ + P G + D + A+ TH H DH G + Sbjct: 2 SQEHALLVDCGLFQGAETSPEGRAGTGNLAIDFP-----LDTIKALVATHVHIDHVGRIP 56 Query: 86 DLWSF-LHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 L + PV S + LL K + R K++ ++ + Sbjct: 57 YLLAAGFSGPVLCSEPSAKLLPIVLEDAFKLGFSRDQKQVERYLKLIEQRIIALPYKQWF 116 Query: 139 VRV-------------NHSIPETMALVIRSPV------GNIVHTGDWKLDDDAILGDVTD 179 V I + + + IV +GD IL Sbjct: 117 TLVDTQQLRARIRLQRAGHILGSAYVEVDLRYPETGEKKRIVFSGDLGAAHAPILS---- 172 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVS 238 L+ +ST R + + + + + + G V++ FS + Sbjct: 173 ----APKAPYKADILVIESTYGDRLHEDRRNRRARLEKVLEHALSNDGTVMIPAFS--IG 226 Query: 239 RIRSIIDIAEQ 249 R + ++ E Sbjct: 227 RTQELLYELED 237 >gi|301063233|ref|ZP_07203782.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300442661|gb|EFK06877.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 310 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 33/167 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI-TFIMKER-KNLMAIFITHAHEDHYG 82 + ++IDCG PD + + + K + A+ I+H H DHY Sbjct: 39 SILLADNDATLLIDCG---------------PDAREQLRRNKVKKIDAVLISHEHNDHYI 83 Query: 83 ALHDL--WSFL-------HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +L + + +PVY + ++E + Y I + G G Sbjct: 84 GLDELFVYKRVLPNEVFSPIPVYLTHETRLVVEVRFAYLEELGVIKFKEIEPGQWFRQGP 143 Query: 134 FSIESVRVNHSIPETMALVIRSPVG-------NIVHTGDWKLDDDAI 173 F I + +H ++ +++T D+ D Sbjct: 144 FRIFPFKTDHGTFAKGSVGFMVQGTRHSGGNARLLYTSDFAEIPDMP 190 >gi|242058371|ref|XP_002458331.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor] gi|241930306|gb|EES03451.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor] Length = 539 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 112/337 (33%), Gaps = 48/337 (14%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 +A F++H H DHY L W V+ S L+ + +S G + Sbjct: 76 VAYFLSHFHSDHYSGLGPSWRR--GLVFCSAPTARLVSSVLS----VPPQLVVSLDVGVR 129 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + V +S+ +V NH P + + SP VHTGD++ + + Sbjct: 130 ITVDGWSVTAVDANH-CPGAVQFLFASPGPSAERYVHTGDFRY--TESMTRDPNLLEFVR 186 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG---------CVLVTTFSSS 236 A+ D+T + T S++ + + +K K L+TT++ Sbjct: 187 -----ADAVFLDTTYCNPKFTFPSQEDSVDYVVNAIKRVKEESSVSGERVLCLITTYA-- 239 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLK--RVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 V + R ++++A + G I + +K V+ + G+ +D G + Sbjct: 240 VGKERILLEVARRCGCSIHVDSRKMKILTVLGFGGENGVFTEDATGTDVHVIGWNILGET 299 Query: 295 IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 P + E + + + V Sbjct: 300 W---------PYFQPNFVKMKE---IMIERGYAKAVGFVPTGWMYET------KKEGFAV 341 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 RV V S H N+L+ +++ P+ ++ Sbjct: 342 RVKDSLEIHLVPYSEHSSYNELRDYIKFLHPKKVIPT 378 >gi|254169281|ref|ZP_04876113.1| hypothetical protein ABOONEI_970 [Aciduliprofundum boonei T469] gi|197621758|gb|EDY34341.1| hypothetical protein ABOONEI_970 [Aciduliprofundum boonei T469] Length = 290 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 97/284 (34%), Gaps = 79/284 (27%) Query: 71 IFITHAHEDHYGALHDLWSFLHVP--------------------------VYASP----- 99 + +THAH DHYG + L +P +Y + Sbjct: 1 MLLTHAHMDHYGMIGYL--RFDIPLVASPETLAIIKAYQDAGKSDNATSVIYGAKREEDS 58 Query: 100 FAIGLLEAK-----RVYERVSKKIPCISFQAGD------------------------KVD 130 ++ +L++K E++ K + + ++ Sbjct: 59 SSMPILKSKGNSIKNNEEKIRKYLMLRRLIPTEELSYEEIDFLCLQSTEERMDYIAEMLE 118 Query: 131 VG-----AFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDA--ILGDVTDKDS 182 G F + + V+HSI + +I I +TGD+++ + T+K Sbjct: 119 FGHLESLPFKVNAHPVDHSIYGAVGYIIEDGNSKKIAYTGDFRMHGERGEETLKFTNKAK 178 Query: 183 LCAIGNEGILALMCDSTNAM--REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 G L+ + T RE +E+ + +N ++ + KG ++ + + R+ Sbjct: 179 -------GSDVLIIEGTRLEDDREHHYTTEQDVFENCSAVVGDEKGLIIADFSARNFERL 231 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 IA++ GR +V+ + + I + + + D+ Sbjct: 232 NMFAKIAKENGRNLVVTDKDAYAITGLLTAGTEIDVENIMVYDK 275 >gi|312891388|ref|ZP_07750905.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] gi|311296082|gb|EFQ73234.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] Length = 315 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 13/142 (9%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ + + W+++D GV + + AI +TH H D Sbjct: 25 NVYMIANRKGVADGWVLVDTGVRGYSRQ------IIKAAEALFGAGTRPEAIILTHGHFD 78 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK------VDVGA 133 H G L +L VPVYA P + L K Y + +D+G Sbjct: 79 HTGNLIELLKHWDVPVYAHPMELPYLTGKSSYPPADPVVGGGLMAWMAWAYPTSPIDLGE 138 Query: 134 FSIESVRVNHSIPETMALVIRS 155 ++++ V+ IPE Sbjct: 139 -KVQALDVSGDIPELPEWKTVH 159 >gi|260584336|ref|ZP_05852083.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] gi|260157854|gb|EEW92923.1| metallo-beta-lactamase [Granulicatella elegans ATCC 700633] Length = 212 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 18/142 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + +++ ++ D G I +E +AI +THAH DH GA+ Sbjct: 17 FLIDENKETLIFDPGAQAEDIKEL-----------IEEEGLKPIAIVLTHAHGDHIGAVD 65 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD-------VGAFSIES 138 +L ++P+Y + L + A +G+F E Sbjct: 66 ELRKAYNIPMYMNEIEKEFLTNTDFNRSLYSNENITVEPADGYYPAELGKWKIGSFEPEL 125 Query: 139 VRVNHSIPETMALVIRSPVGNI 160 + P + + + I Sbjct: 126 ALIPGHSPGSTVFIFKDNGFVI 147 >gi|304439047|ref|ZP_07398966.1| beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372406|gb|EFM25993.1| beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 264 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 17/218 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + I+ID G ++ + DI + + AIF+TH H DH + Sbjct: 14 SIFIEENNTRILIDAG-----HSGKKIESLLKDIDV---DPSTIDAIFVTHEHIDHVKGV 65 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L + V+AS A + FQ IE + + H Sbjct: 66 GVLHRRYKMDVFASEVT---FRAMESQVKKINAENIKIFQNSIGFRYKDLYIEPMEIYHD 122 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS------ 198 E + +I S D + ++ + D N + L+ + Sbjct: 123 CQEGNSFIIHSKDEKATILTDTGWVNTEMMKKMDGSDIYYLEANHNVDMLINGTYPWQTK 182 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + +S + + + +++ +++ SS Sbjct: 183 QRILSNRGHLSNENAGEILNKLLRKKGERIILAHLSSD 220 >gi|145351984|ref|XP_001420339.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580573|gb|ABO98632.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 368 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 110/338 (32%), Gaps = 29/338 (8%) Query: 67 NLMAIFITHAHEDHYGAL-HDLWSFLH-VPVYASPFAIGLLEAKR---VYERVSKKIPCI 121 ++ +TH H DHY L +Y S L+ V ++ Sbjct: 30 DVRCYVLTHFHADHYCGLSGSFGKDGDEAKIYCSEITARLVVEFLGVKRERVVGCELGRG 89 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDDAILGDVTD 179 + G V NH P + R+ ++HTGD++ + D T Sbjct: 90 TTLRGAGTRGDDVEATFVDANH-CPGACLVFFRNKITGETLLHTGDFRA-AARVRNDGTL 147 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSS 236 ++ L + + +M D+T ++ T + + + I ++ + L S S Sbjct: 148 RELLTTCRDGSVDEVMLDTTYCEKKWTFPDQDVVLNKMRQIARDELAREPRTLFLCGSYS 207 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + R+I + + + + K + G + D D+ R Q+ V Sbjct: 208 IGKERAIQAVCQGAQSRASVTARRKKSL----ELSGWWRDDAFVCEDDDAEEAARCQVRV 263 Query: 297 IATGSQGEPRSALAQLSRGEMRN---VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 G R+ + +++ R V + G V I+N + Sbjct: 264 CGLGKGSNHRAMMEIMAKEAPRWRAAVAFSPTGWSYTKKMDEDGFNVNPW-IENEGRTRT 322 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +L+ ++++P+ + Sbjct: 323 YAIPY---------SEHSSYTELREFIKFLKPKKITPT 351 >gi|301765736|ref|XP_002918298.1| PREDICTED: DNA cross-link repair 1B protein-like [Ailuropoda melanoleuca] Length = 543 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 95/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR---VYERVSKKIPCISFQAGDK 128 F++H H DH L W+ P+Y SP L+ + ++ D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAYLVHRHLQVPKEWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGRETMTVTLMDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALKLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + + I ++++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPAWVLPSRQEAARQIVELIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ + +G+ L + I + Sbjct: 196 EFQTWVVLSPRRLE----LVQLLGLADVFTLEEKAGRIHAVDH---MEICHS------AM 242 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L + + I S + S Sbjct: 243 LHW--NQTHPTIAILPTSRKIHRSHP--------------------------DIHIIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRTFVAALKPCQVVPI 297 >gi|306755662|sp|D2H8V8|DCR1B_AILME RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link repair 1B protein; AltName: Full=SNM1 homolog B gi|281339477|gb|EFB15061.1| hypothetical protein PANDA_006715 [Ailuropoda melanoleuca] Length = 529 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 95/323 (29%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR---VYERVSKKIPCISFQAGDK 128 F++H H DH L W+ P+Y SP L+ + ++ D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAYLVHRHLQVPKEWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGRETMTVTLMDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALKLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + + I ++++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPAWVLPSRQEAARQIVELIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ + +G+ L + I + Sbjct: 196 EFQTWVVLSPRRLE----LVQLLGLADVFTLEEKAGRIHAVDH---MEICHS------AM 242 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L + + I S + S Sbjct: 243 LHW--NQTHPTIAILPTSRKIHRSHP--------------------------DIHIIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRTFVAALKPCQVVPI 297 >gi|166031161|ref|ZP_02233990.1| hypothetical protein DORFOR_00847 [Dorea formicigenerans ATCC 27755] gi|166029008|gb|EDR47765.1| hypothetical protein DORFOR_00847 [Dorea formicigenerans ATCC 27755] Length = 223 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 22/98 (22%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDI 58 K ++ PLG + G N L + ++ +++D G F Sbjct: 13 KAMKIEKFPLGIL---GANCYLL--INEETKDTVVVDPGGHSKKF--------------T 53 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVY 96 +I +E+ NL+AI +TH H DH + + ++PVY Sbjct: 54 AYIEEEKLNLVAILLTHGHFDHIMGIDSILENWNIPVY 91 >gi|297526338|ref|YP_003668362.1| hypothetical protein Shell_0331 [Staphylothermus hellenicus DSM 12710] gi|297255254|gb|ADI31463.1| conserved hypothetical protein [Staphylothermus hellenicus DSM 12710] Length = 357 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 102/326 (31%), Gaps = 54/326 (16%) Query: 72 FITHAHEDHYGALHD--LWSFLHVPVYASPFAIGLLEAK----RVYERVSKKIPCISFQA 125 I+HAH DH L D L+S + A+P L+ R+ K + Sbjct: 41 VISHAHYDHIVGLKDSILYSKQ---IVATPPTHDLILTLGYVGGRELRMLYKNKMVRLNY 97 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 ++ G + + +H I + ++I I +TGD+KL ++ + Sbjct: 98 YEEYTYGGEKLVLIP-SHHIIGSAQVLIEIGDLRIGYTGDFKLGENTKIM---------- 146 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIID 245 +G+ L+ +ST + ++ + DI+ + +I+ + Sbjct: 147 ---DGLDILIIESTYGDPSYRRPFKNEVEDLLVDIVLDGLEMYGKVVIFGYHGKIQEAMQ 203 Query: 246 IAEQIGR-KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 I + G + L+ + V +A G + + ++ Sbjct: 204 ILRRNGVKEPFLMPKRIYEVTRIAEKYGYEIGGYYNMRSLKGREILKSNRYIL------- 256 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE-VAIGHIKNRLVEQGVRVIAEDAEC 363 ++ R + I S G E +R Sbjct: 257 ----FEHFNKANHRRL--GNNTLYIVLS----GWEFNGPIKKIDRYTWLVA--------- 297 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLV 389 +S H ++L + P++++ Sbjct: 298 ---LSDHADFDELIEYVEKAEPRLVI 320 >gi|222823901|ref|YP_002575475.1| hydrolase (metallo-beta-lactamase family) [Campylobacter lari RM2100] gi|222539123|gb|ACM64224.1| conserved hypothetical protein, putative hydrolase (metallo-beta-lactamase family) [Campylobacter lari RM2100] Length = 199 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 50/168 (29%), Gaps = 23/168 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + + K I+ID PG + FI + +AI TH H D Sbjct: 14 NCYIIDH----NNKQIIID----------PGENA----YKFIKENTSKPLAILNTHGHYD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +P++ +L+ + + ++ + F + Sbjct: 56 HVYDNAKVKMAYEIPIFIHKDDAFMLKDSF-NYGFEHSNADVLIENENEFSIDEFKFKFH 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 P I +++ +GD+ +D + Sbjct: 115 HFPGHTPGCCM--IELVGEDVLFSGDFLFYRSIGRWDFPYSDATKMKE 160 >gi|167461320|ref|ZP_02326409.1| hypothetical protein Plarl_01958 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 291 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 27/239 (11%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGAL 84 + +++D G+S K + + + + L AIF+TH H DH L Sbjct: 42 VDTGETKLLVDAGLSAKKLEQL-----------MEERGVSGQELNAIFVTHEHSDHIKGL 90 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +P+YA+ L+ + G V+ IES ++H Sbjct: 91 GALSRKHQLPIYANQKTWEQLDKYI---GTITDEHKRFMETGTSVEFENIRIESYGISHD 147 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS------ 198 E + ++ + D + + D D+L N I L Sbjct: 148 AAEPVGYILYQGSRKLSIATDLGYMSSKVKDKIGDSDALILETNHDIEMLRVGHYPWNIK 207 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 + + +S + + + DI+ V + +SR +++D+A R +V Sbjct: 208 RRILSDIGHLSNEAAGEALCDILTEKTKSVYMA----HLSRDHNLMDLARMTIRAVVQD 262 >gi|315125567|ref|YP_004067570.1| RNAse with metallo-beta-lactamase-like domain protein [Pseudoalteromonas sp. SM9913] gi|315014080|gb|ADT67418.1| putative RNAse with metallo-beta-lactamase-like domain protein [Pseudoalteromonas sp. SM9913] Length = 460 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 12/95 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + SS +IDCG+ +D VD D++ I + A+ Sbjct: 7 GAVNGVTGSCHQLIINDQSS---FLIDCGLFQGEDS---VD----DLS-IEFNIDTVRAL 55 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 +TH H DH G + L P++ S + LL Sbjct: 56 IVTHCHIDHVGRIPYLLMAGFKGPIFTSVASASLL 90 >gi|152992883|ref|YP_001358604.1| RNA-metabolising metallo-beta-lactamase [Sulfurovum sp. NBC37-1] gi|151424744|dbj|BAF72247.1| RNA-metabolising metallo-beta-lactamase [Sulfurovum sp. NBC37-1] Length = 467 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 64/280 (22%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + L S I++DCG+ +++ + D K++ + Sbjct: 8 GAAEVVTGSCHLLEI---DSGTRILVDCGMFQGREEH--RNYGLFDFD-----AKSVDYL 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-------AKRVYERVSKK------ 117 +THAH DH G + L + A+ L E + + Sbjct: 58 LVTHAHLDHVGRIPKLVKEGFSGTIVATDATFALAEVVLLDSAKIMKEDYHTHYKKAQRR 117 Query: 118 ----------------------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 + ++ H I + + IR Sbjct: 118 GNEGKVLLPLYEEKDVQAALALPHIMPEYDKPFELCKDVTVTYRNAGH-ILGSAYIEIRY 176 Query: 156 ----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI--S 209 +IV +GD D+D ++ ++ + + L +ST R S Sbjct: 177 KEGEEERHIVFSGDIGNDNDMVIPNL--------VPCKAADFLYVESTYGDRNHKGALES 228 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 E+ + I ++N G V++ +F+ + R + ++ I ++ Sbjct: 229 EEEFRSVITKTLENW-GNVIIPSFA--IERTQELLCILKE 265 >gi|150376141|ref|YP_001312737.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150030688|gb|ABR62804.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 296 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 30/105 (28%) Query: 13 GVGEIGM----------NMALYGYGSPSSRKWIMIDCGV-------SFPKDDLPGVDLVF 55 G EI N+ +G R W++ID GV + G D Sbjct: 24 GTQEIARDLAYRRLAIVNVIFFGEPGCGDRGWVLIDAGVVGTRALIKQAAAERFGSDA-- 81 Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 AI +TH H DH GAL DL VPV+A P Sbjct: 82 -----------RPAAIVMTHGHFDHIGALEDLADEWDVPVFAHPL 115 >gi|27378226|ref|NP_769755.1| hypothetical protein bll3115 [Bradyrhizobium japonicum USDA 110] gi|27351373|dbj|BAC48380.1| bll3115 [Bradyrhizobium japonicum USDA 110] Length = 531 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F G + + L+ ++ ++DCG+ F + Sbjct: 4 TVRFC--GAARTVTGSSYLF----QTATGRFLVDCGL-FQGQKTLKA----LNYGAFPFR 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYER 113 ++ A+ +THAH DH G L L P+ A+ I L Sbjct: 53 PADIQAVLLTHAHIDHSGLLPKLMREGFDGPILATRGTIDLCSWMLPDAG 102 >gi|254281989|ref|ZP_04956957.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] gi|219678192|gb|EED34541.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] Length = 436 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 56/425 (13%), Positives = 117/425 (27%), Gaps = 91/425 (21%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKKIP- 119 + + +THAH DH G + L + A+ ++ L A E + Sbjct: 23 IDYLLLTHAHLDHCGRIPLLAKRGFKGEIIATAASLELARLVMLDSAGLQEEEARYQTRK 82 Query: 120 ----------CISFQAGDKVDVGAFSIESVRVNHS-----IPETMALVI----------- 153 I + F + ++ P A I Sbjct: 83 AQRRRGGRKGDIEPLYTTLDALNCFELMGRHASYDQALQLAPGIKATFIDAGHILGSASI 142 Query: 154 ------RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 +++ +GD AIL D T + A++ ++T R Sbjct: 143 LLSLEEHGRHQSLLFSGDLGYSGRAILRDPT--------PPPEVDAVVMETTYGDRLHKQ 194 Query: 208 ISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 + + + I + + G V++ TF+ + R + II + + + + Sbjct: 195 LQPSIDELYEVINETLARG-GNVIIPTFA--LERAQEIIYYLRE------GVENGQIKYY 245 Query: 266 SVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ--GEPRSALAQLSRGEMRNVKLA 323 + + + + + E L + A GS P + + M ++ Sbjct: 246 TNVFLDSPMAISATEIFERHPECFDNETLKLSADGSDCFAMPGLHFTRETAESMAINQIN 305 Query: 324 EKDTVIFSSRAIPG-------------------------NEVAIGHIKNRLVEQGVRVIA 358 ++ S G N I + + + Sbjct: 306 GGAVIMAGSGMCTGGRVRHHLKHNLWGKQNSVVFVGYAANGTLARRIIDGAKKVRIYGEE 365 Query: 359 EDAECPVHV----SGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELALQEGIACV 413 + VH S H +L ++ P+ +HGE + A + + Sbjct: 366 INVNASVHTIGGFSAHADQAELLAWHKQTGNPKTTFLVHGEDSSMQAFAKQLNNTQVEIP 425 Query: 414 PPVRN 418 + Sbjct: 426 VLYQE 430 >gi|210608670|ref|ZP_03287947.1| hypothetical protein CLONEX_00126 [Clostridium nexile DSM 1787] gi|210152927|gb|EEA83933.1| hypothetical protein CLONEX_00126 [Clostridium nexile DSM 1787] Length = 535 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 76/291 (26%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + L ++ K I+IDCG+ PD + + Sbjct: 1 MKLTFI--GAAHEVTGSCHLLE----TNGKHILIDCGMEQG-----------PD---LYE 40 Query: 64 ERK------NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------ 110 ++ ++ I +THAH DH G + + + + L + Sbjct: 41 NQELPIAPGDIDFILLTHAHIDHSGLIPLMVKNGFKGQIVTTFATADLCDIMLRDSAHIQ 100 Query: 111 ----YERVSK---------KIPCISFQAGDKVDV-------------GAFSIESVRVNHS 144 R K + A D V++ + + H Sbjct: 101 EFEAEWRNRKARRSGEPLYEPLYTMQDAQDAVELLAPCDYEQRIELCKGVEVRFTDIGH- 159 Query: 145 IPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + + + I IV +GD + I+ D + ++ +ST Sbjct: 160 LLGSACIEIWITEEGLSRKIVFSGDVGNINQPIIK---DPKQIKE-----ADYVVIESTY 211 Query: 201 AMREGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 R + + I G V++ +F+ V R + ++ + Sbjct: 212 GDRLHGDERPDYLGEFTRILRDTFQKGGNVVIPSFA--VGRTQELLYFIRE 260 >gi|322381338|ref|ZP_08055341.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154914|gb|EFX47185.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 274 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 27/239 (11%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGAL 84 + +++D G+S K + + + + L AIF+TH H DH L Sbjct: 25 VDTGETKLLVDAGLSAKKLEQL-----------MEERGVSGQELNAIFVTHEHSDHIKGL 73 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L +P+YA+ L+ + G V+ IES ++H Sbjct: 74 GALSRKHQLPIYANQKTWEQLDKYI---GTITDEHKRFMETGTSVEFENIRIESYGISHD 130 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS------ 198 E + ++ + D + + D D+L N I L Sbjct: 131 AAEPVGYILYQGSRKLSIATDLGYMSSKVKDKIGDSDALILETNHDIEMLRVGHYPWNIK 190 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 + + +S + + + DI+ V + +SR +++D+A R +V Sbjct: 191 RRILSDIGHLSNEAAGEALCDILTEKTKSVYMA----HLSRDHNLMDLARMTIRAVVQD 245 >gi|221214744|ref|ZP_03587713.1| beta-lactamase domain protein [Burkholderia multivorans CGD1] gi|221165283|gb|EED97760.1| beta-lactamase domain protein [Burkholderia multivorans CGD1] Length = 258 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 18/164 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 + F LG E N + S ++ +++DCG S + + G + Sbjct: 1 MRFASLGSGSE--GNALVVEATSGTTTTRVLLDCGFSAKEVERRLG---------RLNLC 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +L AI ITH H DH G+ L +P+Y S A + Sbjct: 50 VDDLDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAAGA------DEADVDLRVLW 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 104 GDETAAIGDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|332526971|ref|ZP_08403060.1| beta-lactamase domain protein [Rubrivivax benzoatilyticus JA2] gi|332111410|gb|EGJ11393.1| beta-lactamase domain protein [Rubrivivax benzoatilyticus JA2] Length = 232 Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 32/160 (20%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL----MAIFITH 75 N L + + + I++D G+ D I + L A+ TH Sbjct: 25 NCYL--HATDVPGECILVDPGL---------------DAERIEQALSALALTPRAVVCTH 67 Query: 76 AHEDHYGALHDLWSFLHVPVYASP---FAIG----LLEAKRVYERVSKKIPCISFQAGDK 128 H DH G+ PVY +G LL A R+ RV + P Sbjct: 68 GHFDHAGSAAHFQERHGCPVYLHERDLRTLGASNFLLMAFRIPARVRQPRPERVDDGTPA 127 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 +D+G ++ V P + A+ I + TGD Sbjct: 128 LDIGGLAVRWHPVPGHTPGSCAIEIGKA----LFTGDTLY 163 >gi|154685236|ref|YP_001420397.1| YflN [Bacillus amyloliquefaciens FZB42] gi|154351087|gb|ABS73166.1| YflN [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ + R+ I++D G+ P+ +++ ++ KE L A+ +TH H D Sbjct: 32 NVYFIE-NPSAPREIILVDAGM--PQS----AEMITEEMKRRFKEGYQLKAVILTHGHFD 84 Query: 80 HYGALHDLWSFLHVPVY 96 H GA+ +L F VPVY Sbjct: 85 HVGAIEELLEFWDVPVY 101 >gi|16081753|ref|NP_394139.1| hypothetical protein Ta0668 [Thermoplasma acidophilum DSM 1728] gi|10639954|emb|CAC11806.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 322 Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 15/121 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +ID G+S + I I + K + +FITH H DH G + Sbjct: 33 YRLETDDSAFLIDSGMS--DNS----------IKSIEQNLKKIDFVFITHLHIDHLGGVL 80 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 L +P Y + + L+ K F+ V +E + H + Sbjct: 81 YLHEKYGIPAYMNHLDLDLIMNANEDRDGYIKRHSEIFRVNG---VPPSMVEEIITMHPV 137 Query: 146 P 146 Sbjct: 138 I 138 >gi|302187128|ref|ZP_07263801.1| Beta-lactamase-like protein [Pseudomonas syringae pv. syringae 642] Length = 252 Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNETYVLVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEIAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|260102102|ref|ZP_05752339.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|260084089|gb|EEW68209.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|328466861|gb|EGF37971.1| hypothetical protein AAULH_00604 [Lactobacillus helveticus MTCC 5463] Length = 265 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 18/166 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N +L G + I++D G+S K VD+ DI Sbjct: 1 MKVSVLASGSTG----NTSLIETG----QHKILMDAGLSGKKTKQLLVDVGV-DI----- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ F++H H DH G L L + +A+ L + ++ + + Sbjct: 47 --NDIDMAFLSHDHTDHSGGLGVLMRRYPKIDAFANSGTWQYLLDTQKIGKLPAE-QMNT 103 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + G G + + +H + V S I D Sbjct: 104 IEPGQTKTFGDLDVTAFATSHDAAQPQYYVFTSGGKRIAFLTDTGY 149 >gi|295690915|ref|YP_003594608.1| metallo-beta-lactamase protein [Caulobacter segnis ATCC 21756] gi|295432818|gb|ADG11990.1| metallo-beta-lactamase protein [Caulobacter segnis ATCC 21756] Length = 521 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL-WSFLHV 93 ++IDCG F + E + A+ +THAH DH G L L + Sbjct: 40 VLIDCG-MFQGSKTLKA----LNYQPFPFEVGKVDAVLLTHAHIDHSGLLPKLMLAGFEG 94 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIP 119 P+YA+ L V ++ Sbjct: 95 PIYATAATRDLAAVMLVDAGGIQENE 120 >gi|184200647|ref|YP_001854854.1| hypothetical protein KRH_10010 [Kocuria rhizophila DC2201] gi|183580877|dbj|BAG29348.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 279 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 81/263 (30%), Gaps = 42/263 (15%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + L R W I++D G +DL + AI ++H H Sbjct: 20 SCYLVSGQDAEGRTWRIVLDMGNGALGTLQRYIDL------------HAIDAIMLSHLHP 67 Query: 79 DHY---GAL-------HDLWSFLHVPVYASPFAIGLLEAKRV---YERVSKKIPCISFQA 125 DH G L W+ +P+Y L + ++ + +Q Sbjct: 68 DHCVDVGGLHVAVKWDPRGWNAGTIPLYGPSATHTYLNQLHMLPPEHSMATEFDFHVWQP 127 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDW-KLDDDAILGDVTDK 180 G V VG F++ + VNH PE AL + + + ++GD D+ D Sbjct: 128 GRPVTVGPFTVAAFPVNHPCPEPFALRVEYHGPHGTEVLTYSGDTDSCDELVAAARDADV 187 Query: 181 DSLCAIGNEG-ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR 239 A EG L R G + +++ + + + ++ V Sbjct: 188 FLCEAAYEEGREDHLRGIHLTGRRAGEAATAAHVRRLLLTHLPVWNDPEVTAGEAAEVF- 246 Query: 240 IRSIIDIAEQIGRKIVLLGSSLK 262 + L G S Sbjct: 247 ---------AGPVSVALPGRSYD 260 >gi|220930747|ref|YP_002507656.1| beta-lactamase [Clostridium cellulolyticum H10] gi|220001075|gb|ACL77676.1| beta-lactamase domain protein [Clostridium cellulolyticum H10] Length = 263 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 13/161 (8%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + + I+ID G+S + + I ++ + L AI I+H H DH L Sbjct: 20 TEKTKILIDAGLS--------GKKILEALCSIGEKPEELSAILISHEHVDHVRGAGILSR 71 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + +P+YA+ +E ++ K+ + + ++G I + H E + Sbjct: 72 KVDIPIYANESTWCAMENGIGPVKLENKVAFSTGEE---FEIGDICIRPFAIPHDAAEPV 128 Query: 150 ALVIRSPVGNIVHTGDW--KLDDDAILGDVTDKDSLCAIGN 188 + I D D+ D L + + Sbjct: 129 GFNFFADGKRITTATDIGHMSDELLDSIVGNDLVLLESNHD 169 >gi|158320741|ref|YP_001513248.1| beta-lactamase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140940|gb|ABW19252.1| beta-lactamase domain protein [Alkaliphilus oremlandii OhILAs] Length = 206 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 14/132 (10%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G + K ++D G D VD + + L I +THAH D Sbjct: 14 NCYVI--GDEQTNKAAVVDPG----GD----VDKII---KVLENNDLELKYILLTHAHGD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H G L +L PVY + +L+ V + I A ++ G +E Sbjct: 61 HIGGLVELRERTGAPVYIHQEDLYMLQNSSVNYSQAISGVKIETNADGFLNDGD-RLELG 119 Query: 140 RVNHSIPETMAL 151 + SI T Sbjct: 120 DLTLSIIHTPGH 131 >gi|257485839|ref|ZP_05639880.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330986658|gb|EGH84761.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012928|gb|EGH92984.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 478 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 55/268 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD---LPGVDLVFPDITFIMKERKNL 68 G V + + + S+ ++IDCG + + G D + + Sbjct: 10 GAVDTVTGSCHQLCMDASSN---LLIDCGSVHERGERAVSFGFD------------PETI 54 Query: 69 MAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCI 121 A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 55 RALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQRY 114 Query: 122 SFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIVH 162 ++ F V+H I + ++ +V Sbjct: 115 LELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVVF 174 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIM 221 +GD L E L+ +ST R S + + I D Sbjct: 175 SGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALERIIDKA 226 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 227 LEDNGTVLIPAFS--IGRTQELLYELED 252 >gi|297621652|ref|YP_003709789.1| Metallo-beta-lactamase superfamily protein [Waddlia chondrophila WSU 86-1044] gi|297376953|gb|ADI38783.1| Metallo-beta-lactamase superfamily protein [Waddlia chondrophila WSU 86-1044] Length = 258 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 13/134 (9%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 ++ID G+S G+ + + I + + AI +TH H DH L L +P Sbjct: 25 LLIDAGMS-------GL-AIKRRLEEINVDIDEIDAILVTHEHSDHIQGLRVLAFKHRIP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 V+A+ + + K +++ FSI+ H + +A I+ Sbjct: 77 VFANHETAKGIVNRFHDCPKFKIFSTGESFEYCGLEIHPFSIQ-----HDTLDPVAFTIK 131 Query: 155 SPVGNIVHTGDWKL 168 I D Sbjct: 132 IDNLKIGFCTDLGF 145 >gi|289422488|ref|ZP_06424331.1| beta-lactamase domain protein [Peptostreptococcus anaerobius 653-L] gi|289157060|gb|EFD05682.1| beta-lactamase domain protein [Peptostreptococcus anaerobius 653-L] Length = 266 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 76/235 (32%), Gaps = 31/235 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNL 68 G G G N G S I++D G+S + GVD L Sbjct: 8 GSGSSG-NCHYVG----SKDTNILVDAGLSGKKITGSLEEIGVD------------PTKL 50 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 I +TH H DH + L +P+Y + ++K + F+ Sbjct: 51 DGILVTHEHSDHIKGIGILSRRYKLPIYINYKTWLATKSKI---GKVDENLVNIFENDKA 107 Query: 129 VDVGAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDW--KLDDDAILGDVTDKDSLCA 185 ++ ++ ++H + + I D ++ +D L + Sbjct: 108 YNIKDLLVKPFSISHDASDPVGFRFTNEKDNKISIATDIGHVSENIRKNILGSDLVILES 167 Query: 186 IGNEGILALMCDS----TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 ++ +L + + M + +S + K + D++ N +L+ S Sbjct: 168 NYDKEMLLMGSYTYALKKRVMSDIGHLSNEDAAKFVVDLINNGTEHILLAHLSRE 222 >gi|254479347|ref|ZP_05092684.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] gi|214034713|gb|EEB75450.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] Length = 209 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 25/185 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N+ + +R+ I+ID G + + +I + + I +TH H Sbjct: 12 GANLYVV--WDRDTREGIIIDPGEVYDEIK-----------NYIKENGIKVKHILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDV 131 DH G + ++ +F V S +L + V+++V I + D + Sbjct: 59 FDHIGGVEEIRAFTGGKVAISEEDAPMLLDPSQNLSEMVFKKVICSPADIILKDKDVLGF 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G +S+E + ++ I + TGD + ++L A E Sbjct: 119 GNYSLEVISTPGHTKGSVCFKIGD----VYFTGDTLFRGSIGRHDFPGGNFETLMASIKE 174 Query: 190 GILAL 194 +L L Sbjct: 175 RLLTL 179 >gi|254489121|ref|ZP_05102325.1| RNA-metabolising metallo-beta-lactamase [Roseobacter sp. GAI101] gi|214042129|gb|EEB82768.1| RNA-metabolising metallo-beta-lactamase [Roseobacter sp. GAI101] Length = 531 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 13/153 (8%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + L F G + + + + + ++DCG+ F +L + Sbjct: 1 MPHTTLRFC--GAARTVTGSCYWF----QTDQCNFLVDCGL-FQGPKTLK-EL---NYRP 49 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + + THAH DH G L L S P+Y + LL +++ Sbjct: 50 FPFDPAKIDFVLQTHAHIDHSGLLPKLAISGFKGPIYTTEGTRDLLTFMLPDSGYIQEME 109 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 + + G ++ + + + L Sbjct: 110 -VEQLNLRNLRHGKPEVQPIYTRQDAEDCLGLF 141 >gi|297624908|ref|YP_003706342.1| beta-lactamase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297166088|gb|ADI15799.1| beta-lactamase domain protein [Truepera radiovictrix DSM 17093] Length = 343 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 16/78 (20%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN----LMAIFITHAHEDHYG 82 G P SR W++ID G +PG + AI +TH H DH G Sbjct: 63 GHPGSRNWVLIDAG-------MPGTARRI-----LRVAAARFGGPPKAIILTHGHFDHVG 110 Query: 83 ALHDLWSFLHVPVYASPF 100 AL L VPVYA Sbjct: 111 ALSKLLERWDVPVYAHAL 128 >gi|170720568|ref|YP_001748256.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169758571|gb|ACA71887.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 482 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 9/95 (9%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + S +++DCG+ D PG + I + + A+ Sbjct: 10 GGTRGVTGSCHQLHLDEAHS---LLVDCGLEQGADAAPGAE-----FAPIGFDIGGIQAL 61 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 ITH H DH G + L + P+ S + LL Sbjct: 62 IITHVHLDHVGRIPALLAAGFRGPILCSEPSAKLL 96 >gi|157691749|ref|YP_001486211.1| metal-dependent hydrolase [Bacillus pumilus SAFR-032] gi|157680507|gb|ABV61651.1| possible metal-dependent hydrolase [Bacillus pumilus SAFR-032] Length = 247 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 33/207 (15%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG-- 82 GY S +++DCG +D+ + L A+ ++H H DH Sbjct: 21 GYLFESDGFRLLVDCGSGVLSKLQQYIDI------------EELDAVLLSHYHHDHIADI 68 Query: 83 -------ALHDLWSF--LHVPVYASPFAIGLLEAKRVYERVSKKIPC--ISFQAGDKVDV 131 + +P+Y + + R++ + ++Q + + + Sbjct: 69 GPLQYAKLVGYHLGKSSGPLPIYGHTG------NQEAFGRIADDVHTKAKAYQPKEGIQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAIGNEG 190 G F I ++ H E A+ I++ +V+T D + + D + G Sbjct: 123 GPFQINFLKTVHPA-ECYAMRIQAKDAVVVYTADSSYQEAFVPFSKDADLLIAESNFYAG 181 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNI 217 N+ G E + + I Sbjct: 182 QDGSSAGHMNSTEVGKLAMEANVGELI 208 >gi|332686787|ref|YP_004456561.1| Zn-dependent hydrolase [Melissococcus plutonius ATCC 35311] gi|332370796|dbj|BAK21752.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Melissococcus plutonius ATCC 35311] Length = 268 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 54/154 (35%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + +K I++D G+S K + I ++ + L AIF+TH H DH L + Sbjct: 23 IETKKKKILVDVGLSGKKITNLLAE--------IGRKPEELDAIFVTHEHRDHIHGLGVM 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + +YA+ EA + F+ G + G IES V+H Sbjct: 75 ARKYQLDIYANEKTW---EAMNPLIGIIPTEQKQLFEMGKVMTFGDMDIESFGVSHDAIA 131 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D L D Sbjct: 132 PQFYCFHKENHSFVMLTDTGYCSDHIRGLIRNAD 165 >gi|317009177|gb|ADU79757.1| hypothetical protein HPIN_02535 [Helicobacter pylori India7] Length = 205 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSVQLSKALKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|304408060|ref|ZP_07389710.1| metallo-beta-lactamase family protein [Paenibacillus curdlanolyticus YK9] gi|304343079|gb|EFM08923.1| metallo-beta-lactamase family protein [Paenibacillus curdlanolyticus YK9] Length = 291 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 28/160 (17%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-------LMAIFIT 74 + GSP + W++ID G +PG + I++ + AI +T Sbjct: 53 NVLFVGSPEDQHWMLIDAG-------MPG------SASHIIQAAEQRFGPNCSPRAIVLT 99 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI------PCISFQAGDK 128 H H DH G++ +L + VPVYA P L K+ Y + + + Sbjct: 100 HGHFDHVGSIIELIAHWDVPVYAHPLEFPFLTGKQAYLPADPSVGGGLVSRMSPWFPNEP 159 Query: 129 VDVGAFSIESVRVNHSIPE-TMALVIRSPVGNIVHTGDWK 167 +++G + + + SIP+ I + H + Sbjct: 160 INLGD-KLRRLPADRSIPDLPQWRWIHTKGHTPGHVSLFH 198 >gi|154686742|ref|YP_001421903.1| YqgX [Bacillus amyloliquefaciens FZB42] gi|154352593|gb|ABS74672.1| YqgX [Bacillus amyloliquefaciens FZB42] Length = 212 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 17/113 (15%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--- 116 +I + +AI +THAH DH GAL ++ VPVY E K + + Sbjct: 40 YIKENNLKPLAILLTHAHFDHIGALDEVRDRWDVPVYLHK-----NEEKWLEDSSLNGSG 94 Query: 117 ---------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +D+G F +E++ P +++ ++ I Sbjct: 95 ILRGIAVTARPAERLIEGDGILDIGPFHLETLFTPGHSPGSVSYYVKDADLVI 147 >gi|145553259|ref|XP_001462304.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74830382|emb|CAI39059.1| Putative DNA interstrand cross-link repair protein [Paramecium tetraurelia] gi|124430143|emb|CAK94931.1| unnamed protein product [Paramecium tetraurelia] Length = 471 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 59/415 (14%), Positives = 126/415 (30%), Gaps = 37/415 (8%) Query: 52 DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 +++ D + + F+TH H DHY + + W + ++ S LL K Sbjct: 8 NIIVDDFGYARRNPLKRYIYFLTHMHSDHYQGISNGWDYGQ--IFCSTVTKALLLVKFPG 65 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + IP + + + + NH P + ++ + G I+HTGD + + + Sbjct: 66 VKGVMTIPMKTPTEIELCKKYKVKVTFLDANH-CPGAVMILFQGYFGTILHTGDMRFNME 124 Query: 172 AILGDVTDKDSLCAIGNEG------ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 I I NE I L+ D+T + K + +I+ Sbjct: 125 MIP-KNPQLYPPQNISNENGKCSIDIDELILDNTYCDPIFKFPNRDEAFKMLCEIIDKNP 183 Query: 226 GCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS--- 282 + S V + ++++A+ IV+ + V ++ V D+ Sbjct: 184 NNRVFLCVDS-VGKEELMVELAKHYDTVIVVNEQRYEIVTAMNFYVEYFTLDKTQGWIEV 242 Query: 283 ----DESFGLYPREQLIVIATG------------SQGEPRSALAQLSRGEMRNVKLAEKD 326 + L + + + ATG + +L + VK + Sbjct: 243 IRKGEVEERLKDKNTIAITATGWANTTSYQMPDNRRYVIPYSLHSNFNEMHQFVKSIQPA 302 Query: 327 TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQ 386 + + G I +I + + + L + Y+ I Sbjct: 303 LLQKVVKNNTGKSSKIYNITQFSQYMVTLHHIKQRGFEFFLKNYTDEKRLSQEYRSI--- 359 Query: 387 VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFL 441 + ++EL ++ + + + +V G Sbjct: 360 ----MMDSRKQREINQELGIELSEQDHQIINQTMFQDTNQNIFQKQKQVRKGYKF 410 >gi|6687474|emb|CAB64977.1| YycJ protein [Enterococcus faecalis] Length = 249 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 +++K +++D G+S K ++ ++ ++L AI +TH H DH + L Sbjct: 23 IETNQKKVLVDAGLSGKKITSLLAEV--------NRKPEDLDAILVTHEHRDHIHGVGVL 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + VYA+ ++ F+ G + +G IES V+H Sbjct: 75 ARKYKLDVYANEKTWQAMDPMI---GKVDVAQKHIFEMGKVLTLGDMDIESFGVSHDAIA 131 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 + V D + D + D Sbjct: 132 PQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENAD 165 >gi|65321639|ref|ZP_00394598.1| COG0491: Zn-dependent hydrolases, including glyoxylases [Bacillus anthracis str. A2012] Length = 238 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 26/167 (15%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---KNDKNECVIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASP-------FAIGLLEAKRVYERVSKKIPCI 121 +A+ +THAH DH GA+ H+PVY + + + ++ K Sbjct: 79 LAVLLTHAHFDHIGAVDAXRDAFHIPVYVHKEEDWLGDXXVNGSQIFMMNRSITAKPADH 138 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ + V +GD Sbjct: 139 IIDAEGTLAIGSFNFEIFETPGHSPGSISYY--CKEASAVFSGDVLF 183 >gi|316972306|gb|EFV55989.1| DNA cross-link repair 1A protein [Trichinella spiralis] Length = 517 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 107/348 (30%), Gaps = 49/348 (14%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 ++ F++H H DHY L P+ S L+ K K Sbjct: 175 DIELYFLSHFHYDHYVG---LTRHFDAPICCSQITASLVHLKLK----VPKSFLRVLSVN 227 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + +D+G + + + P + + ++HTGD++ + + + Sbjct: 228 EWIDLGDDNSVILIDANHCPGAVMFLFHLKNDHYVLHTGDFRAERVVLDNPIWSSIR--- 284 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV---LVTTFSSSVSRIRS 242 + L D+T + + I+K + L+ + V + R Sbjct: 285 -----VDYLYLDTTYFNPAYIFPCQMVAITKMISIVKQIQQQHNKLLILVGTYEVGKERI 339 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 +AE + K+ + + + + +L S ++ + ++ Sbjct: 340 FTALAEALDCKVAVEKNKM-------QTLKCFDDKKLSDSLTLLKSSTFLHVVSMGVLNR 392 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA---- 358 + + LA E V + S N + + + N++ G R I Sbjct: 393 QKLTAYLASYPTYEH-LVAIKPTGWEF--SGRTEDNLIDVQKM-NKITILGKRFIFRIYV 448 Query: 359 ---------------EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 A V S H +LK+ +RP+ +V Sbjct: 449 LQYVGCGPESLRNFSGKASARVPYSEHSSFAELKQFVLKLRPKQVVPT 496 >gi|121997107|ref|YP_001001894.1| cyclic-AMP phosphodiesterase [Halorhodospira halophila SL1] gi|121588512|gb|ABM61092.1| cyclic-AMP phosphodiesterase [Halorhodospira halophila SL1] Length = 256 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 44/206 (21%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM 69 LG G IG + W+++D G DL ++ I Sbjct: 5 ALGTSGGIG---QGLRTTALLVDGWLLVDAGSGVG-------DLTAAELGGIRD------ 48 Query: 70 AIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + +THAH DH L + + V+A + L A + I Sbjct: 49 -VLLTHAHLDHIAYLGLMADARIGDDSPPIRVHAPAPTLDALRAHLFNGVLWPDFTAIPT 107 Query: 124 -----------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 V +GA + + H++P + I V TGD Sbjct: 108 REEPVLTLHPLAPDQAVPIGALHVTPLPAQHAVP-AVGYRIEDGHACFVFTGD------- 159 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDS 198 T L E AL+ + Sbjct: 160 TGPCPTFWQRLLEA--EPPDALIIEC 183 >gi|255039354|ref|YP_003089975.1| beta-lactamase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254952110|gb|ACT96810.1| beta-lactamase domain protein [Dyadobacter fermentans DSM 18053] Length = 473 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 78/490 (15%), Positives = 143/490 (29%), Gaps = 100/490 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL-------VFPDITFIMKE 64 G ++ +M L S I+IDCG F D++ G VFP + Sbjct: 7 GATQQVTGSMFLLE----SDDYRILIDCGSDFDLDEI-GKKTRYEQQKSVFPFEPSL--- 58 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----------LEAKR---- 109 + + +THAH DH G + +L+ V + + L L KR Sbjct: 59 ---INTVLLTHAHIDHSGNIPNLYKEGFEGRVVCTEPTMALTSLLLKDAANLHQKRLNSR 115 Query: 110 -----------VYERVSKKIPCISFQAGDKV----------DVGAFSIESVRVNHSIPET 148 + + +A D ++ H + Sbjct: 116 INSKKRSGKKKREVPMDYYVEKHVIEALDNFVPVAFGQRYRIADNVTVTYYAAGHLLGAA 175 Query: 149 MA---LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + +GD + +L D + + L+C+ST R Sbjct: 176 HIVLEVYENGEKKRLCFSGDIGRKNYPLL---IDPQEVPQ-----VDYLICESTYGNRLH 227 Query: 206 T--CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ------IGRKIVLL 257 + + I + G +++ +FS V R ++++ Q V Sbjct: 228 EDQRGPVETLADVIKRTCIDIPGRLIIPSFS--VGRTQALLYTLNQLYLDRSFPFIKVFS 285 Query: 258 GSSLKRVVSVA--IDVGIIKKDQLFLSDESFGLYPREQLIVI-------ATGSQGEPRSA 308 S L + ++ K+ +++ L+ E LI + A + EP Sbjct: 286 DSPLAHSSTKVYQKHARMLNKEAREFKEDNDMLFDFENLIYLESSDASRAVSNYNEPCII 345 Query: 309 LAQLSR------GEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 ++ + T++ A G + N +R Sbjct: 346 ISSSGMVQGGRVEAHVEANIGNPYATILMIGYASEG--TLGWRLLNGQDTISIRGKQHPV 403 Query: 362 ECPV----HVSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIACVP 414 V SGH NDL + P + + +HGE + + + G V Sbjct: 404 LANVEKIDVFSGHGDQNDLINFVKMQDPEKLKGIFLVHGEQQSMAEFQSKIQEIGYHSVE 463 Query: 415 PVRNGKMLRL 424 G L Sbjct: 464 TPLRGTTYEL 473 >gi|89099202|ref|ZP_01172080.1| YqgX [Bacillus sp. NRRL B-14911] gi|89086048|gb|EAR65171.1| YqgX [Bacillus sp. NRRL B-14911] Length = 210 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 40/160 (25%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ID G + +I + Sbjct: 6 IPLGPIQ---TNSYVLS---REDGTCLIIDPG---GEASKL--------AGYIKGNKLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVY---------------ASPFAIGLLEAKRVYER 113 +A+ +THAH DH GAL ++ P Y S F + Sbjct: 49 LAVLLTHAHFDHIGALDEIREEFGCPAYLHKKESSWLRDPSLNGSQF--------FRMGK 100 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 V+ K ++ +GAFS + + P +++ Sbjct: 101 VTAKPADNLLAGDQEMKIGAFSFQIIETPGHSPGSVSFYF 140 >gi|298243555|ref|ZP_06967362.1| beta-lactamase superfamily hydrolase [Ktedonobacter racemifer DSM 44963] gi|297556609|gb|EFH90473.1| beta-lactamase superfamily hydrolase [Ktedonobacter racemifer DSM 44963] Length = 329 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 P R +++D G+ GV ++ + + + L + +TH H DH AL L Sbjct: 20 GPGGRTRLLVDAGL--------GVRVLQARLRSLGVDLSQLRGVLVTHEHSDHVLALPSL 71 Query: 88 WSFLHVPVYASPFAIGLLE 106 VPV + +E Sbjct: 72 LRRYQVPVITNEETFAAIE 90 >gi|254883016|ref|ZP_05255726.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|319641860|ref|ZP_07996537.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] gi|254835809|gb|EET16118.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|317386533|gb|EFV67435.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] Length = 258 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 78/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLDDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGRMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHHTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHIG 234 >gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis] Length = 1360 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 119/393 (30%), Gaps = 68/393 (17%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H DHY L WS ++ S L+ D V Sbjct: 69 AYFLTHFHSDHYSGLSSNWSQ--GMIFCSQITANLVTRIL----NVPSQFVYPLPLNDTV 122 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP----VGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + I + NH P + L+ + VHTGD++ + Sbjct: 123 IIDGSEITLIDANH-CPGAVQLLFKVRSSGTFEMYVHTGDFRY-----------SREMKE 170 Query: 186 IGNE----GILALMCDSTNAMREGTCISEKG-------IKKNIYDIMKNAKGCVLVTTFS 234 +G G A+ D+T + ++ + + I + VL + Sbjct: 171 VGILRDFVGCDAVFLDTTYCNPKFVFPKQQESIDYVVSVIERIGGDFQAMSKRVLFLVAT 230 Query: 235 SSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQL 294 V + R +I+IA++ RK+ + ++ V +G + + ++ Sbjct: 231 YVVGKERILIEIAKRCRRKVHVDRRKME----VLRVLGYGESGVFTEDEGQSDVHVVGWN 286 Query: 295 IVIATGSQGEP-RSALAQLS--RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 ++ T P + + ++ RG R V EV Sbjct: 287 VLGETWPYFRPNFANMKEIMVERGYSRIVGFVPTGWTY---------EVKHNK------- 330 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----------HGEPLHLVA 400 VR V S H ++L+ +++RP+ ++ H Sbjct: 331 FSVRSKDSFEIHLVPYSEHSNYDELREYVKFLRPKRVIPTVGVDIENLDSKHAV-KMQKH 389 Query: 401 HKELALQEGIACVPPVRNGKMLRLFPDPIEIID 433 L + + + + +E+ D Sbjct: 390 FAGLVDEMANKKQFLMVFHRESSESDEKVEMDD 422 >gi|77457600|ref|YP_347105.1| Beta-lactamase-like [Pseudomonas fluorescens Pf0-1] gi|77381603|gb|ABA73116.1| putative hydrolase [Pseudomonas fluorescens Pf0-1] Length = 253 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 30/157 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LG + N L S+ ++++DCG S + + GV Sbjct: 1 MRFAVLGSGSQ--GNGTLI----ASADTYVLVDCGFSLRETEKRLLRLGV---------- 44 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L AI +TH H DH + L ++PVY S + + + + + Sbjct: 45 --NPAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSRGTLRGMR------KPIEPAGFV 96 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 + G+++ +GA +I + V H E V Sbjct: 97 TG--GEQLQIGALNIGVIAVAHDAQEPTQYVFSDQEQ 131 >gi|310642254|ref|YP_003947012.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309247204|gb|ADO56771.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 267 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 16/149 (10%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE-RKNLMAIFITHAHEDHYGAL 84 G P SR W+++D G++ D + I + +AI +TH H DH G++ Sbjct: 33 IGEPGSRSWVLVDTGMTGFTDSI---------IRLAEERFTGPPVAIVLTHGHFDHVGSV 83 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-----IPCISFQAGDKVDVGAFSIESV 139 +L PVYA P + L + Y++ + ISF + I S+ Sbjct: 84 IELVQHWGTPVYAHPLELPYLTGMKDYQKPDPSVGGGLMSGISFLYPNDAIDLDDRITSL 143 Query: 140 RVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + SIP + +P H + Sbjct: 144 PKDGSIPGAPGWKWLHTPGHTPGHVSLFH 172 >gi|56419202|ref|YP_146520.1| hypothetical protein GK0667 [Geobacillus kaustophilus HTA426] gi|56379044|dbj|BAD74952.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 244 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 44/191 (23%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + L+ + +++DCG G + T + NL A+ I+H H D Sbjct: 20 SAYLFEHDGFC----LLVDCGS--------GALAKLQNYTAVE----NLDAVIISHYHYD 63 Query: 80 H---YGALHD---LWSFLHV-----PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 H G L + L P+Y ++ + + I++ Sbjct: 64 HIADIGPLQYARLIHKNLGADLPVLPIYGHVEDEA-AFSRLTHSGI---TEGIAYDPNGT 119 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + VG FSI ++ H +P A+ I + +V+T D + + Sbjct: 120 LAVGPFSITFMKTVHPVP-CYAMRITAGGKTVVYTADSSYIPEFLPF------------A 166 Query: 189 EGILALMCDST 199 +G L+C+ Sbjct: 167 KGADLLICECN 177 >gi|77918933|ref|YP_356748.1| beta-lactamase superfamily hydrolase [Pelobacter carbinolicus DSM 2380] gi|77545016|gb|ABA88578.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Pelobacter carbinolicus DSM 2380] Length = 256 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 25/177 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 ++ ++ID G+S + + + I E + L A+ +TH H DH L Sbjct: 15 IYVETAESRLLIDAGLSARE--------IGRRLQVIGAEPERLDALLVTHEHRDHCCGLG 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +VPV+ L V K ++F +GD + +++V + H Sbjct: 67 PVARRWNVPVHVHQATHEAL------PGVGKLPSTVTFDSGDTFRLRDIEVQTVPITHDA 120 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 ++ + G I D L L A +G L+ +S + Sbjct: 121 VAPTGFILSTSAGKIGIVTDLGLA-----------TRLVADRFKGCRVLVLESNHDE 166 >gi|303244817|ref|ZP_07331146.1| ribonuclease Z [Methanothermococcus okinawensis IH1] gi|302484858|gb|EFL47793.1| ribonuclease Z [Methanothermococcus okinawensis IH1] Length = 314 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + ++ DCG + +++ DI+ + + IFITH H Sbjct: 15 KNRNHSSIGLKFDGEILLFDCG------EGAQRQMIYTDISPM-----KINNIFITHLHG 63 Query: 79 DHYGALHDLWSFLH-------VPVYASPFAIGLLEAKRVYERVSKKIPCISFQ-----AG 126 DH L L + + +Y P +E S ++ Sbjct: 64 DHILGLPGLLQSIGFNGRTEPINIYGPPETKETIENILKIGYHSINFNIKVYELSTKNPM 123 Query: 127 DKVDVGAFSIESVRVNHSIP 146 D + I S +NHS+P Sbjct: 124 KIKDTEKYEIYSYPMNHSVP 143 >gi|168182949|ref|ZP_02617613.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|182673917|gb|EDT85878.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] Length = 502 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPLLYKLGYRGKVISTKATADLCSIMLADSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|115923314|ref|XP_787553.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115975619|ref|XP_001194035.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 599 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 51/371 (13%), Positives = 114/371 (30%), Gaps = 32/371 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++HAH DH L W + P+Y S ++ AK ++ K + D+ Sbjct: 28 FLSHAHSDHTSGLSSTWRY---PIYCSEVTGKVVVAKCGVKQSLIKTLSVGNGHIIPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++ + NH P + G ++TGD++ V + Sbjct: 85 TGKETMTVTLIDANH-CPGATIFLFEGYFGRFLYTGDFRFHPCMFSDTVLGLNR------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + L D+T E E K I +++ +V + + ++DIAE Sbjct: 138 -PVDRLYLDNTYNSPENNFPGEDDCKVKIMEVLAEYPYSNVVLGMHQ-LGKEDLLMDIAE 195 Query: 249 QIGRKIVLLGSSLKRV-------VSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 G KI + L + V + I +++ + + E ++ Sbjct: 196 FYGGKIQVTPERLSIIELLDCKDVFTTSEARIRVIPVHTITNSAVEQWNSEFPTIVII-- 253 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 + + +V + S NE + ++ + V I + Sbjct: 254 PSAIFRSQRRSRLANHPSVFIIP------YSSHSSYNE--LIRFVTQVRPRKVIPIVQPP 305 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 + ++ P ++ ++ +H + + + ++ Sbjct: 306 PSKPSEAALADMSNFDHYLDPTPPTLVTIPSSVQTYMNSHLSVPGEVMRPSLRKRQSITF 365 Query: 422 LRLFPDPIEII 432 R + + Sbjct: 366 ERCVSKIAKGV 376 >gi|213969681|ref|ZP_03397816.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] gi|301384797|ref|ZP_07233215.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato Max13] gi|302060717|ref|ZP_07252258.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato K40] gi|302131945|ref|ZP_07257935.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925489|gb|EEB59049.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] Length = 252 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 60/180 (33%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V + D IL D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSNGTRRFGLLTDLGSYCSNILQRYQGLDALM 157 >gi|327481571|gb|AEA84881.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri DSM 4166] Length = 483 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 82/241 (34%), Gaps = 48/241 (19%) Query: 30 SSRKWIMIDCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 ++IDCG F DD G D + D + + + A+ +TH H DH G + +L Sbjct: 25 DENSSVLIDCG-QFQGDDEAGHEDELALDFS-----VEGVKALIVTHVHIDHVGRIPNLL 78 Query: 89 SF-LHVPVYASPFAIGLL---------------EAKRVYERVSKKIPCISFQAGDKVDVG 132 + P+ S + LL + + + I+ + Sbjct: 79 AAGFDGPILCSEPSARLLPIVLEDAFRLSISRDQDQLERYLKVVEQRIIALPYDHWFTLN 138 Query: 133 A-----FSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSL 183 + H + + + + +V +GD +L D Sbjct: 139 ETDGRACKVRLQPAGH-VLGSAYVELELSEGSDVQRVVFSGDLGAPHSPLL---PDL--- 191 Query: 184 CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRI 240 + E L+ +ST R + + ++ + ++ A +G VL+ +FS + R Sbjct: 192 --VPPERADLLILESTYGDRRHEDRAHR--RERLQAAIERALADQGTVLIPSFS--IGRT 245 Query: 241 R 241 + Sbjct: 246 Q 246 >gi|242077909|ref|XP_002443723.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor] gi|241940073|gb|EES13218.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor] Length = 699 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 115/360 (31%), Gaps = 31/360 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHV--PVYASPFAIGLL--------EAKRVYERVSKKIPCI 121 F+THAH DH + + P+YAS I + A V V + Sbjct: 27 FLTHAHRDHLVGIAATSAVSASSSPIYASRLTILIALRIFPQLDRAAFVELDVGDPPLRV 86 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 G F++ ++ NH P + + P G ++HTGD +L D + Sbjct: 87 PDPD------GDFTVTALDANH-CPGAVMFLFEGPFGAVLHTGDCRLTPDCLTALTP--- 136 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + I L D T A +++ + + + + V + + Sbjct: 137 --PHLARGRIDYLFLDCTFARCALRFPTKEDSIRQVINCVWKHPSAPAVYLVCDMLGQED 194 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGS 301 +I ++ G KI + +R + + + L ++ + Sbjct: 195 VLIGVSRAFGSKIYVDR---ERNSDCHQTLAHVAPEILA-DADAAASTRFHVIPFPRLSE 250 Query: 302 QGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 + ALA+ + + + P A + + + E Sbjct: 251 RATEILALARAAHQPEPLIIRPSSQWYAYYDPPPPEEAAAASQRQQQKPVLTEAMRDEFG 310 Query: 362 ECPVHVSGHPYPNDLKRMYQWIRPQVLV-----AIHGEPLHLVAHKELALQEGIACVPPV 416 V +S H ++L++ ++P+ +V + + ++ H L+ + + Sbjct: 311 VWHVCLSMHSSQDELEQALGILKPKWVVSTTPPCMAVDLSYVRKHCSLSRFGPDDPLWKL 370 >gi|260589629|ref|ZP_05855542.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|331083061|ref|ZP_08332178.1| hypothetical protein HMPREF0992_01102 [Lachnospiraceae bacterium 6_1_63FAA] gi|260539869|gb|EEX20438.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|330405063|gb|EGG84600.1| hypothetical protein HMPREF0992_01102 [Lachnospiraceae bacterium 6_1_63FAA] Length = 210 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 28/173 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L + +G V N + +++ +++D P + + I Sbjct: 1 MKKLMLRGIVVGPVQ---TNCYFL--KNEETQEILIVD-----PGAEQERI------IYA 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + K + + I +TH H DH A+++L +PVYA+ LL + +S Sbjct: 45 LDKLQGKPVGILLTHGHYDHVCAVNELREHYKIPVYAAKEEEPLLAD--SQQNLSAAWSG 102 Query: 121 ISFQ--------AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ +++ F I ++ + I + +GD Sbjct: 103 VPYKVKADALLEDEEEIQAAGFEITTILTPGHTSGSCCYWI--KDEEVCFSGD 153 >gi|148379084|ref|YP_001253625.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932433|ref|YP_001383468.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935549|ref|YP_001387015.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|148288568|emb|CAL82649.1| putative metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152928477|gb|ABS33977.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931463|gb|ABS36962.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] Length = 502 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|58220681|gb|AAW67946.1| putative beta-lactamase fold exonuclease [Desulfovibrio gigas] Length = 546 Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 68/528 (12%), Positives = 132/528 (25%), Gaps = 88/528 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LGG + + + ++ + +DCG+ D+ + + Sbjct: 1 MKIQFLGGAQTVTGSC----HMMEAAGRRFCVDCGMHQGSR-----DIEARNQNTTVYRP 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY------------- 111 + I +THAH DH G L + +YA+ LL Sbjct: 52 AEIDFICMTHAHIDHSGLLPRMVRDGFKGVIYATAPTRDLLAIMLEDSAHIQEMEAEWQS 111 Query: 112 ---ERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 R K+ + D + F + S P V G+I+ + + Sbjct: 112 KKRHRKGKRDVEPLYTIQDAHNTMPRFQVVEYNTPFS-PAPGITVTYKEAGHILGSAFLE 170 Query: 168 LD-------DDAILGDVTDKDSLCAIGNEG---------------ILALMCDSTNAMREG 205 D + T++ L G+ G L +ST R Sbjct: 171 FDIEEPAAPGENGGKGGTNRSRLIFSGDLGRPNALFLRDPEDAAPADYLFVESTYGDRNH 230 Query: 206 T--CISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV-------- 255 S + + I K + ++ + + + + GR Sbjct: 231 KDENASRDELAEAIAYSYKQGEKVIIPAFAVERTQEVIYSLFLLREEGRLPADMPVYVDS 290 Query: 256 -------------LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + + + L + L A Sbjct: 291 PLAIKATEIFRKHPEYFDAETHALLKQGKNPLSLPNLRFTQTREESQAINALRKPAVVIS 350 Query: 303 GEPRSALAQLSRG-EMRNVKLAEK-DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++ + V F +R PG I + + + Sbjct: 351 ASGMCNAGRIKHHLRHNLWRPGASIVFVGFQARGTPG-----RKIVDGIQNLRILGDEVS 405 Query: 361 AECPVHV----SGHPYPNDLKRMYQWI-RPQV-LVAIHGEPLHLVAHKELALQEGIACVP 414 + + S H + + RP + + +HGE L + V Sbjct: 406 VKARIFTIGGFSAHAGQSQILTWLSAFARPGMKVYLVHGENSAQKILAGLIRERFKLDVH 465 Query: 415 PVRNGKMLRLFPDPI--EIIDEVVHGLFLKDGFLIGKFADLGIAKRRQ 460 + L P EI + + +L+ RR+ Sbjct: 466 IPAYLEECVLSPGKPPLEITHPQLAEPRIDWPWLVQDADAKLAELRRR 513 >gi|311254550|ref|XP_003125885.1| PREDICTED: 5' exonuclease Apollo-like [Sus scrofa] Length = 537 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 86/260 (33%), Gaps = 18/260 (6%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W PVY SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWCR---PVYCSPITAYLLHRHLQVSKQWIRALEVGESHILPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V ++ + NH P ++ + G I++TGD++ + Sbjct: 85 VGRETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRFTPSMLKEPALQLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S++ + I ++++ + S + + + +A Sbjct: 138 -PIHTLYLDNTNCNPALVLPSQQEAARQIVELIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ +V + + ++ + + V+ + Sbjct: 196 EFQTWVVLSPRRLE-LVQLLGLADVFTVEEKAGRIHAVDHMEICRSAVLRWNQTHPTIAI 254 Query: 309 L--AQLSRGEMRNVKLAEKD 326 L ++ ++ + Sbjct: 255 LPTSRRIYRSHPDIHIIPYS 274 >gi|39996731|ref|NP_952682.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|39983612|gb|AAR35005.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|298505743|gb|ADI84466.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 256 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 22/142 (15%) Query: 28 SPSSRKWIMIDCGVSFPKD----DLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + I+ID G+S + L GVD L A+FI+H H DH Sbjct: 17 IETGESRILIDAGLSARELVRRLSLIGVD------------AAQLDALFISHEHTDHVRG 64 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L +PV+ S R + F++G ++ R+ H Sbjct: 65 AGVLARKYRIPVHVSYPT------HREISGQIHGVYVTEFESGYSFTFRDLLVDPFRITH 118 Query: 144 SIPETMALVIRSPVGNIVHTGD 165 + + + S G + D Sbjct: 119 DACDPVGFTVESREGKVGIATD 140 >gi|283458298|ref|YP_003362917.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa DY-18] gi|283134332|dbj|BAI65097.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa DY-18] Length = 297 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 38/199 (19%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERK--NLMAIFITHA 76 + + + R W I++D G + G+ + + ++ AI I+H Sbjct: 20 SCYMLTATDFAGRTWRIIMDMG-----NGSLGM---------LQRHIDLSDIDAILISHL 65 Query: 77 HEDHY---GAL-------HDLWSFLHVPVYASPFAIGLLEAKRV---YERVSKKIPCISF 123 H DH L W +P+Y L A +S + ++ Sbjct: 66 HPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGPAAINEYLSATHGLDPEPGMSTEFEYHTW 125 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSL 183 G+ V +G F +E RV H + AL I + D TD Sbjct: 126 TEGEPVQIGPFRVEPFRVVHPSKDPYALRITCNDREGHTVFSYSGD--------TDLCEG 177 Query: 184 CAIGNEGILALMCDSTNAM 202 G +C++ Sbjct: 178 LVKAARGADLFLCEAAYQE 196 >gi|228967325|ref|ZP_04128360.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792360|gb|EEM39927.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] Length = 191 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 21/147 (14%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 ++ I+ D G G LV T++ +E+ +A+ +THAH DH GA+ + Sbjct: 3 DQKECIIFDPG-------HEGEKLV----TYLQEEQLKPLAVLLTHAHFDHIGAVDAVRD 51 Query: 90 FLHVPVYASPF--------AIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 ++PVY + + + ++ K A + + +F+ E Sbjct: 52 AFYIPVYVHKEEADWLGDATVNGSQIFMMNRSITAKPADHIIDAEGTLTIESFNFEIFET 111 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKL 168 P +++ S N V +GD Sbjct: 112 PGHSPGSISYY--SKEANAVFSGDVLF 136 >gi|320323344|gb|EFW79432.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 478 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 82/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + S+ ++IDCG S + G D + Sbjct: 10 GAVDTVTGSCHQLCMDVSSN---LLIDCG-SVQERGERAASFGFD------------PET 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 54 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 113 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 114 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 173 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 174 FSGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALEQIIDK 225 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 226 ALEDNGTVLIPAFS--IGRTQELLYELED 252 >gi|227508147|ref|ZP_03938196.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192376|gb|EEI72443.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 274 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M+N++ + L G G N+ + + I++D G+S K + Sbjct: 8 MENDDMQISVLASGSTG----NVTYVE----TPQHKILLDAGLSGKKIANL--------M 51 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 I ++ ++ + +TH H DH ++ L + VYA+ + ++ + Sbjct: 52 RSIGRDINDVDTLLVTHEHSDHRQSVGVLARKYDLNVYANQGTWDAMRSRI---GKIPEE 108 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 F +D G IES V+H E V + V D + D + Sbjct: 109 EINIFPPDTVMDFGDIDIESFSVSHDAAEPQFYVFHHRNKSFVVLTDTGYVSDRMEGVIK 168 Query: 177 VTD 179 D Sbjct: 169 DAD 171 >gi|154492670|ref|ZP_02032296.1| hypothetical protein PARMER_02305 [Parabacteroides merdae ATCC 43184] gi|154086975|gb|EDN86020.1| hypothetical protein PARMER_02305 [Parabacteroides merdae ATCC 43184] Length = 267 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 25/169 (14%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD--IT 59 +L FL L G G N G ++ID G+ + V D I Sbjct: 1 MKLSFLSLASGSSG----NCYYLGTPEFG----VLIDAGIGIRT-----IKKVLKDKAID 47 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI-GLLEAKRVYERVSKKI 118 F ++A+ ITH H DH + L +PVY + G+ +++ V E + Sbjct: 48 F-----SKIVAVLITHDHADHIKTVGCLGEKHCIPVYTTEAVHRGISKSRYVEETLVSSR 102 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 I + + F I + V H + + I D Sbjct: 103 KVIEKEV--PFMIRDFRITAFEVPHDSTDNVGYYIEYGDHKFTLATDVG 149 >gi|168178518|ref|ZP_02613182.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226948371|ref|YP_002803462.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|182671044|gb|EDT83018.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226841612|gb|ACO84278.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] Length = 502 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|319654322|ref|ZP_08008410.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] gi|317394022|gb|EFV74772.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] Length = 282 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 W+++D G+ PK + + + E AI +TH H DH GA+ DL Sbjct: 45 EKPGDWVLVDAGM--PKS----AEKIMDAAEELFGENARPKAIILTHGHFDHVGAIIDLV 98 Query: 89 SFLHVPVYASPFAIGL 104 VPVYA + + Sbjct: 99 EHWQVPVYAH--TLEM 112 >gi|110598396|ref|ZP_01386669.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Chlorobium ferrooxidans DSM 13031] gi|110340005|gb|EAT58507.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Chlorobium ferrooxidans DSM 13031] Length = 463 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 91/288 (31%), Gaps = 66/288 (22%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFI 61 EL F G G + + + G + +++DCG+ +D+ + D + Sbjct: 1 MELEFY--GATGRVTGSCHILRVGGAT----VLLDCGLIQGSREDEALNAEPFPFDPSA- 53 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR----------- 109 + A+ +TH H DH G L L PVY + L Sbjct: 54 ------VDAVVLTHGHIDHSGRLPLLVKKGFAGPVYTQQATVDLCRVLLLDSASLGERDA 107 Query: 110 --------------------VYERVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPET 148 + V + K ++ I + H I + Sbjct: 108 IFRQKHPQSAGDRHAEPLYTREDAVRALNSFVGLPYHQKQEILPGIIIRFMDAGH-ILGS 166 Query: 149 MALVIRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + G++ V +GD + I+ D +++ A++ +ST R Sbjct: 167 ALVEVWLHEGDVSRKLVFSGDVGQYNTPIMN---DPETIEE-----ADAVIVESTYGDRL 218 Query: 205 GTCI--SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I + + + I G +L+ F+ + R + ++ + Sbjct: 219 HREIALTLAEMGEIIRKAAAGG-GNILIPAFA--IGRSQELLYFFSEH 263 >gi|326794901|ref|YP_004312721.1| beta-lactamase [Marinomonas mediterranea MMB-1] gi|326545665|gb|ADZ90885.1| beta-lactamase domain protein [Marinomonas mediterranea MMB-1] Length = 365 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 24/133 (18%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 +++D G L G PD + NL A+ I+H H+DH G L DL + Sbjct: 32 RLLLDAG-----GSLEG----LPDKGW--NIPDNLDAVLISHDHQDHIGGLPDLDKQ--I 78 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVYA+P +V + K++ + +++ ++ + HS Sbjct: 79 PVYATP---------QVQPYLPKQLTVQTLPNKGTIEIVGIAVTTGNAGHSFGGVWIH-- 127 Query: 154 RSPVGNIVHTGDW 166 + ++GD+ Sbjct: 128 LGIDNGLFYSGDF 140 >gi|325856913|ref|ZP_08172411.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] gi|325483286|gb|EGC86263.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] Length = 266 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 56/169 (33%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L FL G G G N L G+ +MIDCGV I + K Sbjct: 2 LKFLSFG-SGSSG-NCYLLYTGT----DCLMIDCGVG---------------IRSLKKHF 40 Query: 66 KN-------LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 N + + ITH H DH ++ + LH+PVY + + R Sbjct: 41 HNYGLQLSMVHNVLITHDHADHVKSVGSISGDLHLPVYTTEDVHRGISRNWCVRRKIDSQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + G ++ +GAF + V H + + I D Sbjct: 101 LAKNLVKGKEIMIGAFRVTPFGVPHDSTDCVGYSIECGGIRFTLVTDCG 149 >gi|138896015|ref|YP_001126468.1| hydroxyacylglutathione hydrolase [Geobacillus thermodenitrificans NG80-2] gi|134267528|gb|ABO67723.1| Hydroxyacylglutathione hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 265 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 22/158 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG I N L +++D G G LV + +++ +AI + Sbjct: 63 VGPIQANAYLLS---AEDGSCVIVDPGAE-------GAALV----RRMEEKQLTPLAILL 108 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAI------GLLEAKRVYERVSKKIPCISFQAGD 127 THAH DH G + D+ + VPVY L + V + Sbjct: 109 THAHFDHIGGIPDVLARWDVPVYLHENEKQWLQDPALNSSLYFGAPVVVRCEPTCIAGRT 168 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +G F + P +++ IV +GD Sbjct: 169 TLTIGPFVFDVRETPGHSPGSVSYY--CEAAQIVFSGD 204 >gi|219848901|ref|YP_002463334.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543160|gb|ACL24898.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 257 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 26/120 (21%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGAL----HDLW 88 I+ID G PD + + A+ +THAH DH L Sbjct: 47 IVIDAG---------------PDFRLQALAAGLCRIDAVLLTHAHFDHVAGLDDLRPFCL 91 Query: 89 SFLHVPVYASPFAIGLLEAKRV----YERVSKKIPCISFQAGD-KVDVGAFSIESVRVNH 143 VP+Y SP + + + P I+ + +GA +I + + H Sbjct: 92 RQGTVPIYGSPQTLADVRRRFAYAFDESSSGSSRPAITLHPVEAPFQLGALTIVPIAIPH 151 >gi|86138800|ref|ZP_01057372.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] gi|85824447|gb|EAQ44650.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] Length = 338 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 91/308 (29%), Gaps = 40/308 (12%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + + ++DCG + D ++ A+FITH H DH G Sbjct: 4 TVNDRIWLLDCGFGPEANAHF-------DPAWLEGA----DAVFITHDHIDHIGGASHAV 52 Query: 89 SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 +P+YA+ L + + ++ + R H++ Sbjct: 53 EA-GLPIYATAQTAKAL---------PPAAKVHLLPEQGQTLINGVTLTTGRNGHAMGGV 102 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + ++GDW D A + D + R Sbjct: 103 WFHF--DLGEGLFYSGDWSE---ESDWFTFDVPPPAATAILDCSYHLDDVPQSDR----- 152 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-RSIIDIAEQIGRKIVLLGSSLKRVVSV 267 + + ++ +G VL+ S R + + + G + V+L + + Sbjct: 153 -----LEALNALLDRVEGQVLLPVPPS--GRAGEIALHLIRRYGCENVMLDPECQDRLRA 205 Query: 268 AIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDT 327 A+ G + D ++ P EQ + + A R + +L Sbjct: 206 ALHSGAVSADAQEIAPLLH-RGPMEQARFLICDTPNADGGAAWGYVRAWHESGRLGRDAH 264 Query: 328 VIFSSRAI 335 V+F+ Sbjct: 265 VVFTGHMT 272 >gi|291276782|ref|YP_003516554.1| putative hydrolase [Helicobacter mustelae 12198] gi|290963976|emb|CBG39815.1| putative hydrolase [Helicobacter mustelae 12198] Length = 207 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 31/184 (16%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + +ID G+ ++M+E KN AI +TH H Sbjct: 12 GTNCYILCENIDGKDAQWIIDPGMG--------------AFEWVMQECKNPQAILLTHGH 57 Query: 78 EDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSK---KIPCISFQAGDKVDVGA 133 DH + + L +P+Y +LE ++ P +++++ +++ Sbjct: 58 FDHIFDVAKIKQALPEIPIYCPEKDCFMLEEDFFDVGITPCKADKPILNYKSSITINIQG 117 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD---------DDAILGDVTDKDSLC 184 + P + + + +GD+ + Sbjct: 118 LDFIFHHLPGHTPGCSII----EYKDHIFSGDFVFRRSIGRFDFPYSSPKDMKESLQRFR 173 Query: 185 AIGN 188 + Sbjct: 174 ELPK 177 >gi|257870082|ref|ZP_05649735.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804246|gb|EEV33068.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 268 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 19/181 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L G G ++ + S++K I++D G+S K + Sbjct: 2 MKESAFQVSIL-ASGSSGNSLYI-----ESNKKRILVDAGLSGKKITSL--------LDE 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ ++L AI +TH H DH + L + VYA+ ++ V +K Sbjct: 48 VGRKPEDLDAILVTHEHRDHIHGVGVLARKYKLDVYANTKTWQAMDNMVGNIAVEQK--- 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F+ G + +G IES V+H + V D + D + Sbjct: 105 HVFEMGKVLTMGDMDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGA 164 Query: 179 D 179 D Sbjct: 165 D 165 >gi|257865292|ref|ZP_05644945.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257874892|ref|ZP_05654545.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257799226|gb|EEV28278.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257809058|gb|EEV37878.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 267 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 19/181 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L G G ++ + S++K I++D G+S K + Sbjct: 1 MKENAFQVSIL-ASGSSGNSLYI-----ESNKKRILVDAGLSGKKITSL--------LDE 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ ++L AI +TH H DH + L + VYA+ ++ V +K Sbjct: 47 VGRKPEDLDAILVTHEHRDHIHGVGVLARKYKLDVYANTKTWQAMDPMIGNVAVEQK--- 103 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F+ G + +G IES V+H + V D + D + Sbjct: 104 HIFEMGKVLTLGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGA 163 Query: 179 D 179 D Sbjct: 164 D 164 >gi|257783915|ref|YP_003179132.1| beta-lactamase domain-containing protein [Atopobium parvulum DSM 20469] gi|257472422|gb|ACV50541.1| beta-lactamase domain protein [Atopobium parvulum DSM 20469] Length = 280 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 17/152 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L L G G N L + IMIDCG+S + + + Sbjct: 7 LHILASGSKG----NCTLLE----TPDGLIMIDCGISRKE--------ILRRSKELNVNL 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++AIFITH H DH L + VPV+A+ L ++ + V+ + + Sbjct: 51 STIVAIFITHEHTDHVVGLPVVSKTFDVPVFATTGTAAALTGRKSCQNVTFTLIDQAGSV 110 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 I + +H + E M + Sbjct: 111 HID-AAPDIEINTFPTSHDVCEPMGMRFDFLA 141 >gi|28871098|ref|NP_793717.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854348|gb|AAO57412.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331017400|gb|EGH97456.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 252 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGSRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|330989395|gb|EGH87498.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 252 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + VGA I+ V V H E V D +L D+L Sbjct: 98 GGESLQVGALGIDVVSVAHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|194898775|ref|XP_001978943.1| GG12882 [Drosophila erecta] gi|190650646|gb|EDV47901.1| GG12882 [Drosophila erecta] Length = 637 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 104/336 (30%), Gaps = 56/336 (16%) Query: 67 NLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ + F+TH H DH G L P+Y SP L++ Sbjct: 168 DIDGVTHYFLTHFHADHYIG----LTKKFCYPLYVSPTTARLVQTFIK----VDTTYIHE 219 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKD 181 + + V + ++ NH P + + S I+HTGD++ D + Sbjct: 220 IEVDQTLVVNGVQVTALEANH-CPGALMFFFKLSSGECILHTGDFR--------GSADME 270 Query: 182 SLCAIGNE-GILALMCDSTNAMREGTCISEKG-----IKKNIYDIMKNAKGCVLVTTFSS 235 SL N I L D+T + + + I KNA +L+ S Sbjct: 271 SLPIFWNHANIDLLYLDTTYMNKNYDFCHQSESVDRAVYLVRAFIEKNASKRILIVCGSY 330 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + + + + +A++ K+ + + V +K L ++ Sbjct: 331 VIGKEKIWLALAKEFTMKVWTES-------NRSTAVRCLKWPDLDSVLTEDPREANLHVV 383 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 + S + + +S+ G Sbjct: 384 TMGKISYPSLVDYFTLFEDQYDMLLGIRP-SGWEKNSKPSYG------------------ 424 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + + S H +L+R ++++P+ +++ Sbjct: 425 --KRISTIGIEYSEHSSYKELERFVRFLKPKRVIST 458 >gi|163790942|ref|ZP_02185365.1| metallo-beta-lactamase YycJ [Carnobacterium sp. AT7] gi|159873784|gb|EDP67865.1| metallo-beta-lactamase YycJ [Carnobacterium sp. AT7] Length = 270 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N+ S K +++D G+S + + I + Sbjct: 10 KVSILASGSSG----NVTYIE----SKEKKLLVDSGLSGKRVTEL--------LKKIDRN 53 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +L I +TH H DH + L ++ VYA+ + K F+ Sbjct: 54 VADLDGILVTHEHRDHVHGVGVLARKYNLDVYANEQTWAAMSPII---GTIKTEQKYLFE 110 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 G + +G IES V+H V D + D + D Sbjct: 111 MGKTMTIGDIDIESFGVSHDAIAPQFYSFHKDNKKFVMLTDTGYVSDRMRGIVSNADAYL 170 Query: 183 LCAIGNEGILAL 194 + + +L + Sbjct: 171 FESNHDLEMLRM 182 >gi|326798213|ref|YP_004316032.1| beta-lactamase [Sphingobacterium sp. 21] gi|326548977|gb|ADZ77362.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 274 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 23/149 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMKERKNLMAIFITHA 76 N G + R+ ++ID G+S + + + + L P + AIFI+H Sbjct: 14 GNCYYVG----NRREAVLIDAGISCREIERRMTRLGLSIPS----------IKAIFISHE 59 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H DH L L +PVY + + F A D + +G F I Sbjct: 60 HSDHIKGLCRLSLKYRIPVYINQRTLT------ATGFFIAPELLHLFHASDPIQIGDFQI 113 Query: 137 ESVRVNHSIPETMALVIRSPVGNI-VHTG 164 H + + V+ I V T Sbjct: 114 TPFAKYHDAADPYSFVVEGGSIRIGVFTD 142 >gi|261419956|ref|YP_003253638.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|319766770|ref|YP_004132271.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261376413|gb|ACX79156.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|317111636|gb|ADU94128.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 282 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPG-VDLVFPDITFIMKE---RKNLMAIFITH 75 N+ L G+ P R ++++D G +PG D + + + AI +TH Sbjct: 41 NICLVGH--PDDRAFVLVDAG-------MPGSADDIV---SVVEDRFGSGSRPQAIILTH 88 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 H DH GAL +L +VPVYA + L K Y + Sbjct: 89 GHFDHVGALIELIREWNVPVYAHKDELPYLTGKARYPEPDASVEGGLLAKISPF-FPNEP 147 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHT 163 I+ S+P V P + +HT Sbjct: 148 IQLGTHIQSLP-ADGTVPHLPEFHWLHT 174 >gi|260828015|ref|XP_002608959.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae] gi|229294313|gb|EEN64969.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae] Length = 377 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 102/326 (31%), Gaps = 40/326 (12%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHY L + +Y+S L++ K Sbjct: 55 AYFLSHFHYDHYQGLSKHFRHA---IYSSKVTCNLVKKKIR----VADRYLHPLPLNTPC 107 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 DV + + NH P + + + P N++HTGD++ D ++ A+ Sbjct: 108 DVEGVQVTLLEANH-CPGAVMFLFQLPDGKNLLHTGDFRAD-TSMECYP-------ALTG 158 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC---VLVTTFSSSVSRIRSIID 245 + L D+T + ++ + + A L+ S ++ + R Sbjct: 159 CKVHTLYLDTTYCNPAYSFPAQMEVIDFAVGVAVEAVQHNPKTLIVCGSYTIGKERVFFA 218 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 IAE +G K+ K + + + L + + P + L Sbjct: 219 IAEALGCKVCAT-RDKKNTLDCLDSDQVKRLVTLNGRETRLHVLPMKDLKF------NSL 271 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 +S L + +S + N + + Sbjct: 272 KSYLEGYRPQYDSVLAFEPTGWTHNNSVSTVAN-------------IRPKRHGNITVYGI 318 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H ++KR Q+++P ++ Sbjct: 319 PYSEHSSYTEMKRFVQFLQPAKILPT 344 >gi|260428219|ref|ZP_05782198.1| beta-lactamase domain protein [Citreicella sp. SE45] gi|260422711|gb|EEX15962.1| beta-lactamase domain protein [Citreicella sp. SE45] Length = 337 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 86/249 (34%), Gaps = 44/249 (17%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L G+G + AL+ + +++D G + PD++ Sbjct: 3 RLTALSGLGR--KSAALF--LLEIRGRRLLLDMGDGLETGER-------PDLS----GAG 47 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + A+ ++HAH DH G L L + PV+AS + R + + Sbjct: 48 PIDAVLLSHAHVDHAGGLDRLDEIGNPPVFASAETL----------RQLGRGEAHTLPEQ 97 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 V + + R H P + + + G +++TGD+ T+ L Sbjct: 98 GDAVVMGVPLRTGRAGH-APGGIWMRFDTEAGGVLYTGDFS----------TEAPLLTCD 146 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 ++ D++ R E G++ I I A+G ++ + R ++ Sbjct: 147 PFPPTATVLADASYGDR------EDGLRDQIAAIAGFARGGAVLPCPAD--GRGPDMVAA 198 Query: 247 AEQIGRKIV 255 +G + Sbjct: 199 LSAMGLDVA 207 >gi|77359408|ref|YP_338983.1| RNAse [Pseudoalteromonas haloplanktis TAC125] gi|76874319|emb|CAI85540.1| putative RNAse with metallo-beta-lactamase-like domain [Pseudoalteromonas haloplanktis TAC125] Length = 474 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 14/102 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP-DITFIMKE 64 + L G V + + + +S I+IDCG+ +D DL DIT Sbjct: 1 MKILHHGAVNGVTGSCHELVINNSTS---ILIDCGLFQGEDSKT--DLAIGFDIT----- 50 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 N+ A+ +TH H DH G + L + P+Y + + LL Sbjct: 51 --NVTALIVTHCHIDHVGRIPYLLAAGFKGPIYTTKASASLL 90 >gi|330964851|gb|EGH65111.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 252 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLQIGALDIDVVSVAHDALEPTQFVFSDGTRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|237800260|ref|ZP_04588721.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023117|gb|EGI03174.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 252 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ +I++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYILVDCGFSLKETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRHNVPVYLSGGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + +GA I+ V V H E V D +L D+L Sbjct: 98 GGESLRIGALDIDVVSVAHDALEPTQFVFSDGERRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|170755072|ref|YP_001780728.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|169120284|gb|ACA44120.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] Length = 502 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|237710334|ref|ZP_04540815.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] gi|229455796|gb|EEO61517.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] Length = 258 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 79/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCLVCTSSDPRDNRLRCSGLIETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I G +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGKMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHNTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHMG 234 >gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group] Length = 1455 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 119/331 (35%), Gaps = 42/331 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY L W V+ SP LL + + AG +V V Sbjct: 78 FLSHFHSDHYTGLGPSWRR--GLVFCSPLTARLLVSVLS----VPPQLVVVLDAGVRVTV 131 Query: 132 GAFSIESVRVNHSIPETMALVIRS---PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + + +V NH P + + RS VHTGD++ I T+ + L IG Sbjct: 132 DGWCVVAVDANH-CPGAVQFLFRSSGPNAERYVHTGDFRFSQSMI----TEPNLLEFIGA 186 Query: 189 EGI--LALMCDSTNAMREGTCISEKGIK--KNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 + + C+ E + K + + + + VL + V + R ++ Sbjct: 187 DAVFLDTTYCNPKFTFPPQKESLEYVVNSIKRVKEESRASGERVLCLIATYVVGKERILL 246 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI-ATGSQG 303 ++A + G KI + ++ + +GI +D +F D + ++ T Sbjct: 247 EVARRCGCKIHVDSRKME----ILTLLGIGGEDGVFTEDAAATDVHVTGWNILGETWPYF 302 Query: 304 EP-RSALAQLS--RGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 P + ++ RG + V + + + E K+ L V Sbjct: 303 RPNFVKMKEIMVERGYNKAVGFVPTGWMYETKK-----EGFAVRTKDSLEIHLVP----- 352 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H N+L+ +++ P+ ++ Sbjct: 353 ------YSEHSSYNELRDYVKFLHPKRVIPT 377 >gi|330443897|ref|YP_004376883.1| metal dependent hydrolase [Chlamydophila pecorum E58] gi|328807007|gb|AEB41180.1| metal dependent hydrolase [Chlamydophila pecorum E58] Length = 262 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 52/172 (30%), Gaps = 19/172 (11%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 F PL G G N A G + I+ID G+S +LV + + Sbjct: 4 FFPL-ASGSKG-NCAYLG----TKSCKILIDLGIS---KQHVKQELV-----SMGVHPEE 49 Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AI I+H H DH + P+ + L ++ + + F G Sbjct: 50 IQAILISHEHSDHISGIKSFVKAYRTPIICNLETARAL-----FQLIDAPLTFNIFSTGS 104 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 I + + H + + + D I + D Sbjct: 105 AFHFHDLKIHTFNLPHDAVDPVGFIFYYRDEKFGFCTDLGWGTSLIAHQLYD 156 >gi|71733363|ref|YP_273792.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289628951|ref|ZP_06461905.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651067|ref|ZP_06482410.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298486121|ref|ZP_07004185.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71553916|gb|AAZ33127.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159366|gb|EFI00423.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325209|gb|EFW81276.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327796|gb|EFW83804.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868051|gb|EGH02760.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 252 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ANQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + VGA I+ V V H E V D +L D+L Sbjct: 98 GGESLQVGALGIDVVSVAHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQRYQGLDALM 157 >gi|325571473|ref|ZP_08146973.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325155949|gb|EGC68145.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 268 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 19/181 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L G G ++ + S++K I++D G+S K + Sbjct: 2 MKENAFQVSIL-ASGSSGNSLYI-----ESNKKRILVDAGLSGKKITSL--------LDE 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ ++L AI +TH H DH + L + VYA+ ++ V +K Sbjct: 48 VGRKPEDLDAILVTHEHRDHIHGVGVLARKYKLDVYANTKTWQAMDPMIGNVAVEQK--- 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F+ G + +G IES V+H + V D + D + Sbjct: 105 HIFEMGKVLTLGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGA 164 Query: 179 D 179 D Sbjct: 165 D 165 >gi|319942907|ref|ZP_08017190.1| beta-lactamase family protein [Lautropia mirabilis ATCC 51599] gi|319743449|gb|EFV95853.1| beta-lactamase family protein [Lautropia mirabilis ATCC 51599] Length = 268 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 32/151 (21%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW--- 88 I++D G +++ + + +F+TH+H DH AL + Sbjct: 37 DHDILVDAGTGVEDLS--------------VEDMRRIDHVFLTHSHLDHICALPLMLDTV 82 Query: 89 ---SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK-----------VDVGAF 134 + V+A P I L+ + I V +G Sbjct: 83 GSSRERPIIVHALPETIQALKDHIFNWVIWPDFTEIPHFERPWMVYSPLQVGHPVQIGNR 142 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +I + NH++P + I + G++V++GD Sbjct: 143 TIRPITANHTVP-AVGFHIGATAGSLVYSGD 172 >gi|229495604|ref|ZP_04389337.1| metallo-beta-lactamase family protein [Porphyromonas endodontalis ATCC 35406] gi|229317587|gb|EEN83487.1| metallo-beta-lactamase family protein [Porphyromonas endodontalis ATCC 35406] Length = 268 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 36/161 (22%) Query: 19 MNMALYGYGSPSSRKWIMIDCGV------------SFPKDDLPGVDLVFPDITFIMKERK 66 N G ++ID G+ P + Sbjct: 13 GNCYYLSSGEGG----LLIDAGIPTRTIARALAFQGIPIEGH------------------ 50 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 +M + +TH H DH L L H+PVY + I Y + + +P + + G Sbjct: 51 -IMGVLVTHEHADHIKGLSALALQYHLPVYTT-GTIQQAIDSLRYYKKMEGLPRPTVEVG 108 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + F I V H E + R ++ D Sbjct: 109 EAFCLAGFEIVPFNVPHDSTENVGYYFRRGDFSLTLATDVG 149 >gi|163744023|ref|ZP_02151391.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] gi|161382711|gb|EDQ07112.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] Length = 355 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 27/195 (13%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 L G+G+ G S + ++DCG P+ + D ++ A Sbjct: 7 LSGIGDKGPAC----IKLTSDNRIWLLDCGFG-PEANAYF------DPLWLEGA----EA 51 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 +FITH H DH G +P+YA+ L + Sbjct: 52 VFITHDHIDHIGGASYAVEA-GLPIYATAQTAKAL---------PPAAKVHLLPEQGQTV 101 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + ++ + R H++ ++GDW + D D + + Sbjct: 102 IDGVTLTTGRNGHAMGGVWFHF--DLGEGFYYSGDWSEESDWFSFDAPPPAATAILDCSY 159 Query: 191 ILALMCDSTNAMREG 205 L + S Sbjct: 160 HLDDVPQSQRLEAMH 174 >gi|160934231|ref|ZP_02081618.1| hypothetical protein CLOLEP_03102 [Clostridium leptum DSM 753] gi|156866904|gb|EDO60276.1| hypothetical protein CLOLEP_03102 [Clostridium leptum DSM 753] Length = 214 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 22/155 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L S +++ +++D G++ + D D V +NL I +TH H D Sbjct: 14 NCYLVQ--SKKTKETLLVDPGMACDELD----DAVR------ELGAENLKYILLTHGHFD 61 Query: 80 HYGALHDLWSFLHVPVYA----SPFAI--GLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 H G H + S FA L K Y V I+ + D + G Sbjct: 62 HIGGAAYYQRMTHGKIVMFYLESRFAADGALNLGKSFYSPVEPFQSDITLREADTLPFGG 121 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 SI + + + + I+ TGD + Sbjct: 122 ESITVLHTPGHTSGSCVYCLGN----ILFTGDTLM 152 >gi|310658607|ref|YP_003936328.1| beta-lactamase domain-containing protein [Clostridium sticklandii DSM 519] gi|308825385|emb|CBH21423.1| Beta-lactamase domain protein [Clostridium sticklandii] Length = 211 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 28/185 (15%) Query: 16 EIGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G+ N + +S +ID G F DI I +L I Sbjct: 7 EVGVYRVNCYVI--ADKNSMSAAVIDPGADFEN---------IRDI--IEDNGFDLKYII 53 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAG 126 +THAH DH GA++ L + + +LE K++ + G Sbjct: 54 LTHAHGDHIGAINYLKDTYNPKIVIHYLEKEILENPDYNFSKQLGMNSVSSNADLMLHDG 113 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA--ILGDVTDKDSLC 184 D +++G +E + +M +++ I+ +GD D D + Sbjct: 114 DTLELGDLKLEIMHTPGHTKGSMCILVNE----IMFSGDTLFAGSMGRTDLYSGDSDRMK 169 Query: 185 AIGNE 189 A + Sbjct: 170 ASLKK 174 >gi|254492367|ref|ZP_05105539.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxidans DMS010] gi|224462259|gb|EEF78536.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxydans DMS010] Length = 231 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 15/132 (11%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 MIDCG S ++ + + L+ D + AI ITH H DH + + ++PV Sbjct: 1 MIDCGFS-AREAVKRLQLLNIDPASLS-------AILITHEHADHMAGVRVMARKFNLPV 52 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 Y +P G L +F +K + +E V H E V Sbjct: 53 YTTPGTAGCL-------PEDVAPYIHAFNCHEKFVIDDIEVEPFPVPHDAREPSQFVFSD 105 Query: 156 PVGNIVHTGDWK 167 + D Sbjct: 106 GALRVGLLTDVG 117 >gi|152994831|ref|YP_001339666.1| RNA-metabolising metallo-beta-lactamase [Marinomonas sp. MWYL1] gi|150835755|gb|ABR69731.1| RNA-metabolising metallo-beta-lactamase [Marinomonas sp. MWYL1] Length = 477 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 22/103 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV--------SFPKDDLPGVDLVFPDITFIMK 63 G V + + S + +++DCG+ S + +D DI+ Sbjct: 8 GAVQGVTGSCHEL---FVDSDQSVLVDCGLFQGAETSGSGADSNSLEIDF---DISA--- 58 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 + A+ ITH H DH G L L + P+Y S + LL Sbjct: 59 ----VQALVITHVHIDHVGRLPYLLAAGFTGPIYCSKPSAALL 97 >gi|139439221|ref|ZP_01772663.1| Hypothetical protein COLAER_01677 [Collinsella aerofaciens ATCC 25986] gi|133775245|gb|EBA39065.1| Hypothetical protein COLAER_01677 [Collinsella aerofaciens ATCC 25986] Length = 269 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 20/153 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 G G G N AL + IM+D G+S + + + N+ A+ Sbjct: 10 GSGSKG-NCALIE----GPQGLIMVDDGLSRRET--------LKRMAELGLSADNVSALL 56 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 ITH H DH L H P++AS + +P F GD + + Sbjct: 57 ITHEHSDHIKGLDVWCKHWHGPLFASRGT-------LSSKENLSHLPVEEFDPGDTLSIA 109 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +++ +H + + + +I D Sbjct: 110 GIHVQTYSTSHDVINPVGYRFDTLDDSIGFATD 142 >gi|146306887|ref|YP_001187352.1| beta-lactamase domain-containing protein [Pseudomonas mendocina ymp] gi|145575088|gb|ABP84620.1| beta-lactamase domain protein [Pseudomonas mendocina ymp] Length = 488 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 48/252 (19%) Query: 30 SSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 R +++DCG+ + P G + + D + + A+ TH H DH G + Sbjct: 25 DERHGLLVDCGLFQGAETSPEGRAGSERLAIDFS-----LAGIKALVATHVHIDHVGRIP 79 Query: 86 DLWSF-LHVPVYASPFAIGLLEAKRVY---------------ERVSKKIPCISFQAGDKV 129 L + P+ S + LL + ++ Sbjct: 80 YLLAAGFKGPILCSEPSAKLLPIVLKDAFKLGFSRDQKQVERYLKLIEQRIVALPYKQWF 139 Query: 130 DVGAF-----SIESVRVNHSIPETMALVIRSPV------GNIVHTGDWKLDDDAILGDVT 178 ++ I R H I + + + IV +GD IL Sbjct: 140 NLIDTPQLSARIRLQRAGH-ILGSAYVEVDLQYPKTREKKRIVFSGDLGAPHAPILP--- 195 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSV 237 L+ +ST R + + + + + + +G VL+ FS + Sbjct: 196 -----ATKAPYKADILVIESTYGDRLHEDRHSRRARLEKVLEHALSNQGTVLIPAFS--I 248 Query: 238 SRIRSIIDIAEQ 249 R + ++ E Sbjct: 249 GRTQELLYELED 260 >gi|261837957|gb|ACX97723.1| hypothetical protein KHP_0515 [Helicobacter pylori 51] Length = 205 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L + P+YA + + Sbjct: 23 GMDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSAQLSKLLKNTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE + + + +++ +I+ P + I ++ Sbjct: 83 LENDIFHLGMPVFSPNFSVPCNKGCTTLEIENTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|228910095|ref|ZP_04073915.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 200] gi|228849612|gb|EEM94446.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 200] Length = 242 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 30/171 (17%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + ++ I+ D G G LV T++ +E+ Sbjct: 36 MPLGPLQ---TNAYIL---MNDQKECIIFDPG-------HEGEKLV----TYLQEEQLKP 78 Query: 69 M---AIFITHAHEDHYGALHDLWSFLHVPVYASPF--------AIGLLEAKRVYERVSKK 117 + A+ +THAH DH GA+ + H+PVY + + + ++ K Sbjct: 79 LKPLAVLLTHAHFDHIGAVDAVRDAFHIPVYVHKEEADWLGDATVNGSQIFMMNRSITAK 138 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + +G+F+ E P +++ S N V +GD Sbjct: 139 PADHIIDAEGTLTIGSFNFEIFETPGHSPGSISYY--SKEANAVFSGDVLF 187 >gi|145352117|ref|XP_001420404.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580638|gb|ABO98697.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 346 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 112/355 (31%), Gaps = 44/355 (12%) Query: 49 PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 PG + + F+TH H DH+ L + VY + L+ K Sbjct: 7 PGTMFIVDGFEYAASSEARCEHWFLTHFHADHHRGLTRTFDR--GVVYGTRTTTELVRTK 64 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG----NIVHTG 164 + + G V V + +R NH P + P ++HTG Sbjct: 65 I----GVPRERLRVVEFGVVVRVDGVDVTFLRANH-CPGAAMICFEFPHRRDASPVLHTG 119 Query: 165 DWKLDDDAILGDVTDKDSLCA----IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 D++ G D L IL L + + E+ +K + Sbjct: 120 DFRF----HDGMRNDPTLLRITSDPSAPRPILILDTTYCSLEHDDFPTQERVLKAVRDAV 175 Query: 221 MKN----AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKK 276 + + L T++ + + + ++ A+ + RK+ +G + KR V AI + Sbjct: 176 VHEDLLSTRKLFLFGTYT--IGKEKVFLEAAKVLNRKV-YIGKA-KRSVMDAIAL----- 226 Query: 277 DQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 D S + +V + +++ + + V FS++ Sbjct: 227 DPEERSAMTHDDSKTNLHVVPMGSTSFMKMASILKYYKSRFDTVIAFRPTGWTFSAQ--- 283 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 K R + + S H N+L+ +++ P+ + Sbjct: 284 ---------KKTARATSRRQRGRLIQYGLPYSEHSSLNELREFVRFMNPKFIFPH 329 >gi|261884390|ref|ZP_06008429.1| YycJ [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 124 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 8/95 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++D G+S K + T I ++ K L IFITH H DH L Sbjct: 10 IYIENDQNAFLVDVGLSARKMEQQ--------FTAIGRDLKKLSGIFITHEHSDHIKGLG 61 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + VP+YA+ + + ++ Sbjct: 62 AVARKYGVPIYANRKTWEAMNGHVGEIPIEQRFQF 96 >gi|163744208|ref|ZP_02151568.1| metallo-beta-lactamase family protein [Oceanibulbus indolifex HEL-45] gi|161381026|gb|EDQ05435.1| metallo-beta-lactamase family protein [Oceanibulbus indolifex HEL-45] Length = 464 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 60/477 (12%), Positives = 130/477 (27%), Gaps = 95/477 (19%) Query: 20 NMALYGYGSPSSRKWIMIDCGV----SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N+ + + I+IDCG+ ++ G P + + +TH Sbjct: 11 NVTGSCHLLQCAGLRILIDCGMFQGRQHTDEENAGAFGFEP---------SEIDVLLLTH 61 Query: 76 AHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK------------ 116 AH DH G + L + + L E AK E ++ Sbjct: 62 AHLDHCGRIPLLVKRGFKGEIICTAPTRDLAELIMMDSAKIQEEDAARATRQRRRQGKSP 121 Query: 117 --------------KIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMALVIRSPV---- 157 K + + + H I ++VI + Sbjct: 122 ITPLYTIPDVLAALKRFGRVLAYEEPFKISKGVDARFINAGH-ILGAASVVIDAVDEGKS 180 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 IV +GD +L D ++ +ST R+ + IK+ + Sbjct: 181 RRIVFSGDIGNRGHQLLPDP--------TPPPTADYVVVESTYGDRQHR-PLDGSIKELL 231 Query: 218 YDIMKNAK--GCVLVTTFSSSVSRIRSII--------DIAEQIGRKIVLLGSSLKRVVSV 267 + + G V++ TF+ + R + ++ + + L + Sbjct: 232 EAVRETLSRGGNVIIPTFA--LERTQEVLFYLAKGIDEDVFAANTPVFLDSPMAISATEI 289 Query: 268 AIDV-----------GIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 D L + +++ + + G Sbjct: 290 FRAHPEGFRDHLRRGMSRGADPFVLPGLRLTRDVVDSILINRVRGGAIIMAGSGMCTGGR 349 Query: 317 MRNVKLAE----KDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHV----S 368 +R+ + +++F A G I + ++ ++ S Sbjct: 350 VRHHMKQNIWRKECSIVFVGFAALG--TLARDIIDGAKSVRLQGKDMPVNAKIYTINGFS 407 Query: 369 GHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 H +L +P++ +HGE + L+ V +++ + Sbjct: 408 AHADQQELLDWLGTTGKPRMTFLVHGERDGGMEGLRQELESKGLPVRCPELHEVVDI 464 >gi|153940118|ref|YP_001390451.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|152936014|gb|ABS41512.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] Length = 502 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 R + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IRD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|126465383|ref|YP_001040492.1| hypothetical protein Smar_0475 [Staphylothermus marinus F1] gi|126014206|gb|ABN69584.1| conserved hypothetical protein [Staphylothermus marinus F1] Length = 357 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 110/358 (30%), Gaps = 54/358 (15%) Query: 72 FITHAHEDHYGALH---DLWSFLHVPVYASPFAIGLLEAK----RVYERVSKKIPCISFQ 124 I+HAH DH L + A+P L+ R+ K + Sbjct: 41 VISHAHYDHIVGLKDSIYYSKQ----IVATPATHDLIIILGYIGGRELRMLYKNKMVRLN 96 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++ G + V +H I + ++I + I +TGD+KL ++ + Sbjct: 97 YYEEYIYGKEKLVLVP-SHHIIGSAQVLIETNDLRIGYTGDFKLGENTKIM--------- 146 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 +G+ L+ +ST + ++ + DI+ + +I+ + Sbjct: 147 ----DGLDILIIESTYGDPSYRRPFKNEVEDLLVDIVLDGLEIYGKVVIFGYHGKIQEAM 202 Query: 245 DIAEQIG-RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 I + G R+ L+ + V +A G + + + ++ Sbjct: 203 QILRRNGVREPFLMPKRIYEVTRIAEKYGYEIGEYYNMRSLEGREILKSNRYIL------ 256 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 ++ R + GN + ++ ++ + Sbjct: 257 -----FEHFNKARHRRL----------------GNNTLYIVLSGWEFDEPIK-KLDRYTW 294 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKM 421 V +S H ++L + P++++ + A + G + + Sbjct: 295 LVALSDHADFDELIEYVEKAEPRLVIVDGSRQGNAEALARELNKRGWRSIVLPGPRVL 352 >gi|320327541|gb|EFW83553.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 478 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 82/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + S+ ++IDCG S + G D + Sbjct: 10 GAVDTVTGSCHQLCMDVSSN---LLIDCG-SVQERGERAASFGFD------------PET 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 54 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 113 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 114 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 173 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 174 FSGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALEQIIDK 225 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 226 ALEDNGTVLIPAFS--IGRTQELLYELED 252 >gi|257871620|ref|ZP_05651273.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257805784|gb|EEV34606.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 268 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 19/181 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK L G G ++ + S++K I++D G+S K + Sbjct: 2 MKENAFQVSIL-ASGSSGNSLYI-----ESNKKRILVDAGLSGKKITSL--------LDE 47 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ ++L AI +TH H DH + L + VYA+ ++ V +K Sbjct: 48 VGRKPEDLDAILVTHEHRDHIHGVGVLARKYKLDVYANTKTWQAMDPMIGNVAVEQK--- 104 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 F+ G + +G IES V+H + V D + D + Sbjct: 105 HIFEMGKVLTLGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGA 164 Query: 179 D 179 D Sbjct: 165 D 165 >gi|218261560|ref|ZP_03476326.1| hypothetical protein PRABACTJOHN_01993 [Parabacteroides johnsonii DSM 18315] gi|218223953|gb|EEC96603.1| hypothetical protein PRABACTJOHN_01993 [Parabacteroides johnsonii DSM 18315] Length = 267 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 25/169 (14%) Query: 4 EELVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD--IT 59 +L FL L G G N G ++ID G+ + V D I Sbjct: 1 MKLSFLSLASGSSG----NCYYLGTPEFG----VLIDAGIGIRT-----IKKVLKDKAID 47 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI-GLLEAKRVYERVSKKI 118 F ++A+ ITH H DH + L +PVY + G+ +++ V E++ Sbjct: 48 F-----SKIIAVLITHDHADHIKTVGCLGEKHCIPVYTTEAVHRGINKSRYVEEKLVGSR 102 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 I + + F I + V H + + I D Sbjct: 103 KVIEKEV--PFMIRDFRITAFEVPHDSTDNVGYYIEYGDHKFTLATDVG 149 >gi|242075620|ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor] gi|241938929|gb|EES12074.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor] Length = 496 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 100/332 (30%), Gaps = 50/332 (15%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y S L++ + Sbjct: 182 AYFLSHFHHDHYGGLTKKW--CHGPIYCSALTARLVKMCLS----VNSDYIYPLELDTNY 235 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P + + S +HTGD++ L + + Sbjct: 236 VIEGVTVTLLEANH-CPGAALIHFQLSDGKTYLHTGDFRASKSMQLHPLLQRGR------ 288 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYD-----IMKNAKGCVLVTTFSSSVSRIRSI 243 + + D+T + ++ + + + K K ++V +S Sbjct: 289 --VNLVYLDTTYCNPKYKFPPQEDVIDFVVRTAQRYLKKQPKTLIVVGAYS--------- 337 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQG 303 + + +S A++V I SFG + I + +Q Sbjct: 338 ---IGKENVYLA---------ISQALEVPIYTDASRRRILHSFGWSDLSKR--ICSCNQS 383 Query: 304 EPRSALAQLSRGEMRNVK----LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 P L L N+K + + G + L Sbjct: 384 SPLHVLP-LGSVNHENLKKYLETLSGRFLAVLAFRPTGWTFSEA-TGKHLDLIKPSCNGS 441 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H +L+ ++RPQ ++ Sbjct: 442 VTIYGVPYSEHSSFTELRDFVMFLRPQKVIPT 473 >gi|198275439|ref|ZP_03207970.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] gi|198271068|gb|EDY95338.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] Length = 265 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 31/238 (13%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGAL 84 + I+IDCG PD M + + + ITH H DH G L Sbjct: 40 VEVNGVRILIDCG---------------PDFREQMLRLNDFRAIDGVLITHEHYDHVGGL 84 Query: 85 HDLW---SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVR 140 DL F +PVYA + L+ + Y P + + + G F + Sbjct: 85 DDLRPFCKFRDIPVYAEDYTATRLKNRMPYCFTENLYPGVPHIPLNYIKEGEPFVVS--N 142 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 V + E + + I+ +++ + +TD L + + L C N Sbjct: 143 VAGNQVEVIPFRVMHGKLPIM---GFRI---GKMAWITDMLHLPESSYDYLKGLDCLVMN 196 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 A+R + + + + ++ A G S + + + + + G Sbjct: 197 ALRIEYHWTHQSLSAALEQTVRIAAGKTYFIHMSHQIG-LHAEVQEQLPENVFLAYDG 253 >gi|160939118|ref|ZP_02086469.1| hypothetical protein CLOBOL_04012 [Clostridium bolteae ATCC BAA-613] gi|158438081|gb|EDP15841.1| hypothetical protein CLOBOL_04012 [Clostridium bolteae ATCC BAA-613] Length = 535 Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats. Identities = 62/454 (13%), Positives = 128/454 (28%), Gaps = 83/454 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ +G E+ + G ++IDCG+ + +L Sbjct: 1 MQMRLTFIGADHEVTGSCHFLEVG----NTKVLIDCGMEQGNNIYQNAELPV-------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + +THAH DH G L + + V + L +++ Sbjct: 49 GYHEIDYVLLTHAHIDHAGMLPWIHARGFRGQVITTYATADLCSIMLKDSAHIQEMEA-E 107 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD---WKLDDDAILGDVTD 179 ++ G +E++ + + G + D + D L Sbjct: 108 WKNRKARRAGRGEVEALYTMQDAEDVLKHFEGVAYGQVFKLNDNLTLRFTDVGHLLGSAS 167 Query: 180 KDSLC-------------AIGNEG------------ILALMCDSTNAMREGTCISEK-GI 213 + IGN+ ++ +ST R Sbjct: 168 IEIWATEGASKKKIVFSGDIGNKNKPLIRDPQYITEADYVVMESTYGNRYHKKDVNHVDS 227 Query: 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS-SLKRVVSVAIDVG 272 I + +G V++ F+ V R + ++ + I + ++ G S + V + V Sbjct: 228 LARIIQETLDRQGNVVIPAFA--VGRTQELLYLIRHIKEERLVAGHDSFEVYVDSPLAVE 285 Query: 273 IIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDTVIFS 331 + + + Y E ++ G L ++ E +N+ VI S Sbjct: 286 ATHVFKDNMLEC----YDEETKALVERGINPIDFPGLKLSITSEESKNINFDMTPKVIIS 341 Query: 332 SRAIPGNEVAIGHIKNRLVEQGVRVIA------------------------------EDA 361 + + H+K+ L V+ Sbjct: 342 AAGMCDAGRIRHHLKHNLWRPECSVVFAGYQAEGTLGRILQDGAQTVKIFGEEIDVRAHI 401 Query: 362 ECPVHVSGHPYPNDLKRMYQWI--RPQVLVAIHG 393 E +SGH + L +P + +HG Sbjct: 402 ETMDGISGHADRDGLISWISAFEKKPDYVFVVHG 435 >gi|327314526|ref|YP_004329963.1| metallo-beta-lactamase domain-containing protein [Prevotella denticola F0289] gi|326945939|gb|AEA21824.1| metallo-beta-lactamase domain protein [Prevotella denticola F0289] Length = 266 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 56/169 (33%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L FL G G G N L G+ +MIDCGV I + K Sbjct: 2 LKFLSFG-SGSSG-NCYLLYTGT----DCLMIDCGVG---------------IRSLKKHF 40 Query: 66 KN-------LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 N + + ITH H DH ++ + LH+PVY + + R Sbjct: 41 HNYGLQLSMVHNVLITHDHADHVKSVGSISGDLHLPVYTTEDVHRGISRNWCVRRKIDSQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + G ++ +GAF + V H + + I D Sbjct: 101 LAKNLVKGKEIMIGAFHVTPFGVPHDSTDCVGYSIECGGIRFTLVTDCG 149 >gi|227892269|ref|ZP_04010074.1| metallo-beta-lactamase superfamily domain protein [Lactobacillus salivarius ATCC 11741] gi|227865910|gb|EEJ73331.1| metallo-beta-lactamase superfamily domain protein [Lactobacillus salivarius ATCC 11741] Length = 279 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 10/111 (9%) Query: 52 DLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY 111 D V D + + IF++H+H DH + + VY S + + Sbjct: 47 DRVLKDF-----KMDRVRGIFVSHSHYDHVMDVPYFAVKCNADVYGSQSTLNVARG---- 97 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 K+ SF + ++G F I+ HS P + + + +H Sbjct: 98 -GGVKENVIHSFDDSLEYEIGNFKIKVFHSKHSKPTAINNDLGQTIDYPLH 147 >gi|70728838|ref|YP_258587.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens Pf-5] gi|68343137|gb|AAY90743.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens Pf-5] Length = 252 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 30/164 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFI 61 + F LG + N L S+ +++DCG S + + GVD Sbjct: 1 MRFAVLGSGSQ--GNGTLI----VSADTCVLVDCGFSLRETERRLLRLGVD--------- 45 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 L AI +TH H DH + L ++PVY S + + + Sbjct: 46 ---PAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSQGTLRGMRKPVEVAGFVRG---- 98 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ + +GA I+ + V H E V D Sbjct: 99 ----GESLQIGALRIDVIAVAHDAQEPTQFVFSDGQRRFGLLTD 138 >gi|193212282|ref|YP_001998235.1| beta-lactamase domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085759|gb|ACF11035.1| beta-lactamase domain protein [Chlorobaculum parvum NCIB 8327] Length = 469 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 87/279 (31%), Gaps = 52/279 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F G + + + G + +++DCG+ D+ + Sbjct: 1 MEIEFY--GATKRVTGSCHILRAGGYT----VLLDCGLVQGSH-----DVEVLNREPFPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE--RV 114 E ++ A+ ++H H DH G L L P+Y I L A R Sbjct: 50 EPSDIDAVVLSHGHIDHSGRLPQLVKRGFKGPIYTHHGTIDLCRVLLRDSAMLSEHDARF 109 Query: 115 SKKIPCISFQAGDKVD--------------------VGAFSIESVRVNHSIPETMALVIR 154 +K + VD + ++ H I + + + Sbjct: 110 MRKHGHQHAEPLYTVDEALQCVRNMTGVGYGERREILPGIAVTLYDAGH-ILASAFVKLE 168 Query: 155 SPVGNIVHTGDWKLDDDAILGDV-TDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 G T + D + D +++ ++ +ST R + Sbjct: 169 ITEGENTRTVVFSGDLGQYDSPILNDPEAIGQ-----ADTVIVESTYGDRLHRDFDKTVT 223 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 + + I ++ G +L+ FS + R + ++ + + Sbjct: 224 ELGEIIETACRDC-GNILIPAFS--IGRSQELLYLFGEH 259 >gi|295134377|ref|YP_003585053.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] gi|294982392|gb|ADF52857.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] Length = 256 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 35/222 (15%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHY 81 I+IDCG PD + L AI TH H DH Sbjct: 36 VSVMVEWEGLNILIDCG---------------PDFRMQMLANNFARLDAILFTHEHNDHV 80 Query: 82 GAL----HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA-FSI 136 L + ++P+YA + L+ + Y V++ + + + F I Sbjct: 81 AGLDDIRPFFFRQGNIPIYAHERVLNALKKRFDYIFVTENKYPGAPGVNEHIVTDNDFEI 140 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + + + + + + +TD S+ E + L Sbjct: 141 QGKHIT------PVSYLHNQLQVYGY-------RMGGFAYLTDIKSISETEAEKLKNLEV 187 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +A+R S + + + I K +T S + Sbjct: 188 VVVSALRVEPHHSHFNLAEALEFIEKIKPNKTYLTHISHLLG 229 >gi|317057212|ref|YP_004105679.1| beta-lactamase domain-containing protein [Ruminococcus albus 7] gi|315449481|gb|ADU23045.1| beta-lactamase domain-containing protein [Ruminococcus albus 7] Length = 261 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 28/145 (19%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDITFIMKERKNLMAIFIT 74 N G + I++D GVS K + G+ + A+ +T Sbjct: 13 GNCTYIG----DEKSGILVDAGVSCKKICTALENAGIGT------------SAVKAVLVT 56 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLL--EAKRVYERVSKKIPCISFQAGDKVDVG 132 H H DH L L L VPVY+ + LL + K V +++ + +G Sbjct: 57 HTHTDHISGLKVLTKKLKVPVYSVSGNLELLAEKDKVCEGCVLEELGEGTED------IG 110 Query: 133 AFSIESVRVNHSIPETMALVIRSPV 157 F + + H P + I P Sbjct: 111 GFGVTAFMTPHDTPVSCGFRITVPG 135 >gi|292670801|ref|ZP_06604227.1| metallo-beta-lactamase superfamily protein [Selenomonas noxia ATCC 43541] gi|292647422|gb|EFF65394.1| metallo-beta-lactamase superfamily protein [Selenomonas noxia ATCC 43541] Length = 260 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 17/141 (12%) Query: 25 GYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + ++ID G+S + + P ++L A+ +TH H DH Sbjct: 23 SIYVELNGAHLLIDAGISAACITERLKEHGIEP---------QSLDAVLVTHEHIDHVRG 73 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L L H+P+ A+ + + D +G ++ ++H Sbjct: 74 LKTLAKQYHLPIIATRGTLAGI-------DGGAAFADNMQSITDDFTIGDVTVRPFAISH 126 Query: 144 SIPETMALVIRSPVGNIVHTG 164 E I + T Sbjct: 127 DAAEPCGFRIEGGYCCTIATD 147 >gi|323342088|ref|ZP_08082321.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464513|gb|EFY09706.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 209 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 14/159 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y S + ++ID + + ++L+ P + ++ + +TH H DH + Sbjct: 16 YYLSSGNQMLIIDPCL---DPNQNTINLLKPTQDY------EVIGVLLTHGHFDHISGVD 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIPCISFQAG----DKVDVGAFSIESVR 140 + + PVY I L+ + + I + + VG F + V+ Sbjct: 67 VIAERFNCPVYMYHEEIHYLKDMSYNLSNQTPEPFTIKTNPIAIDLEPLTVGPFECDVVK 126 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 +++ V + + + + + + Sbjct: 127 TAGHTSGSISYVFDDFIFDGDFIFEQSIGRTDLPTGNMN 165 >gi|323345179|ref|ZP_08085403.1| metallo-beta-lactamase superfamily protein [Prevotella oralis ATCC 33269] gi|323094449|gb|EFZ37026.1| metallo-beta-lactamase superfamily protein [Prevotella oralis ATCC 33269] Length = 267 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 16/161 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N Y + +MID GV G+ ++ Sbjct: 2 LKFISFG-SGSSG-NC----YCLFTENDGLMIDSGV--------GIRILKKHFREYGLSL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-AKRVYERVSKKIPCISFQ 124 + I ITH H DH ++ + ++PVYA+ +E V +++ + I + Sbjct: 48 SAIHHILITHDHTDHVKSVGSISRDYNLPVYATHKVHVGIEQNYCVRNKIAPERVEIVEK 107 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + VG F + V H + + I D Sbjct: 108 DVS-IQVGEFIVTPFEVPHDSSDNVGYKIEHGGITFCLITD 147 >gi|218438429|ref|YP_002376758.1| beta-lactamase [Cyanothece sp. PCC 7424] gi|218171157|gb|ACK69890.1| beta-lactamase domain protein [Cyanothece sp. PCC 7424] Length = 550 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 70/436 (16%), Positives = 141/436 (32%), Gaps = 38/436 (8%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +L P G E L G I++DCG+ DI + Sbjct: 12 QNQLSCFPYGVGHENEGICLLVEMGPYR----ILLDCGLE--------------DIQPLQ 53 Query: 63 KERKNLMA-IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK-KIP 119 + + +F +HAH DH G L +F +P+YAS + LL + R + Sbjct: 54 TDSNSPAHLVFCSHAHSDHARGLLALHQAFPQMPIYASHVTVELLPLNWLDHRSEEISDF 113 Query: 120 CISFQAGDKVD-VGAFSIESVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAIL 174 C Q V+ S E H +P A+++ + +TGD+ L + L Sbjct: 114 CQGLQWRTPVNLFKDLSAEIFPAGH-LPGAAAILLTYKTPKRTYKVFYTGDFSL-SNFQL 171 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL-VTT- 232 + + L + + +L + EK + IY + N + +L V T Sbjct: 172 VEGLSVELLRGLAPD-VLIIEGSYGTMRHPHRRQQEKNLMMRIYQALANGQSILLPVPTL 230 Query: 233 -FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 + ++ I + G + + ++ + + + + + Sbjct: 231 GLGQEILKLLRSHHQFTGKDLDIWVDG---DVTTACDAYLQLLSEFPVSVQNFAKHQSLF 287 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 + + P + + E+ S + H NRL Sbjct: 288 WDERICPRMRRLTPTAIPQLAINPSIVVTDKFEELGKYCLSNGRSWLILIPSHWHNRLDH 347 Query: 352 QGVRVIAEDAE---CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQE 408 ++ + ++ H + ++ +RPQ ++ +HG P +L L + Sbjct: 348 SPLKELKYCPFVSIETYLLAEHSDSRNTTQLIHNLRPQHVIFVHGSPNYLADLTSLEELQ 407 Query: 409 GIACVPPVRNGKMLRL 424 + + ++ L Sbjct: 408 NRYQLHSPQVQTLVEL 423 >gi|189425749|ref|YP_001952926.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422008|gb|ACD96406.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 256 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 51/150 (34%), Gaps = 24/150 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G ++ID G+S + D + +++ A+ +TH H Sbjct: 12 GNCLFIETGGVR----LLIDAGLSLKEITTRLTDSAL--------DPESIHAVLVTHEHI 59 Query: 79 DHYGALHDLWSFLHVPV---YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS 135 DH + VPV YA+ A ER +K + F+ G Sbjct: 60 DHIRSAGSFARRYKVPVLVSYATRQAA---------ERYLQKTQLVEFETGYSFSFRNIM 110 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGD 165 I+ V+H + + V+ S G D Sbjct: 111 IDPFPVSHDCCDPVGFVLESREGRTGSATD 140 >gi|119946225|ref|YP_943905.1| beta-lactamase domain-containing protein [Psychromonas ingrahamii 37] gi|119864829|gb|ABM04306.1| beta-lactamase domain protein [Psychromonas ingrahamii 37] Length = 465 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 68/480 (14%), Positives = 137/480 (28%), Gaps = 81/480 (16%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 G + + L + I+IDCG + + K Sbjct: 4 IQSFGAAETVTGSCHLLQL---KNGSNILIDCGYFQGSKEEQT-------FEPFGFDPKK 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE-------- 112 + + ITHAH DH G + L + V AS ++ L E AK E Sbjct: 54 VDILLITHAHLDHVGRIPKLIKEGFNGKVIASRASMDLAEVILMDSAKIAEEDYKIALKK 113 Query: 113 --------------------RVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL 151 + + Q + + + H I + + Sbjct: 114 AKRSGNEKQVRPPIYSIDDAKAVFDLTIQYAQYNKSIQLTPEVKVTFRNAGH-ILGSATV 172 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I + + + D LG D + AL +ST R+ + E Sbjct: 173 QIEFTEAGLSKSVVFSGD----LGGRRDLIMPAPSFAKQADALYIESTYGDRDHRGLKET 228 Query: 212 --GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI--------GRKIVLLGSSL 261 K+ I + N KG VL+ +F+ + R + I+ + +Q+ + + ++ Sbjct: 229 VDEFKEIIIKTLNN-KGNVLIPSFA--IERTQEILLLLKQMYYDKELPKCQVFLDSPMAM 285 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL---------AQL 312 + + + L + ++ L + + + + Sbjct: 286 RATQIYTRYHSELNEPAKKLLERDGTIFDFPYLQYALKNQDSMLINNIESGCIIIAGSGM 345 Query: 313 SRGEMRNVKLAEKDTVIFSSRAIPGNEVA---IGHIKNRLVEQGVRVIAEDAECPVH--- 366 G + +S G +V + + + +H Sbjct: 346 CTGGRILQHFKHRLWDARNSVIFVGYQVQDTLGRKMIDGAETIQLYHENIKVNAQIHMIN 405 Query: 367 -VSGHPYPNDLKRMYQWI-RPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRL 424 S H +DL + + IHGEP K++ ++ V+ + + + Sbjct: 406 GFSAHADQSDLLAWISEFEKLDKVFLIHGEPDKQAIFKQIIEEQLHKPTHIVKYAEQIYI 465 >gi|325291404|ref|YP_004267585.1| hypothetical protein Sgly_3321 [Syntrophobotulus glycolicus DSM 8271] gi|324966805|gb|ADY57584.1| hypothetical protein Sgly_3321 [Syntrophobotulus glycolicus DSM 8271] Length = 262 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 19/148 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L G +IDCG++ + +++ + E L I +TH H Sbjct: 12 GNAILVG----GQEGSFLIDCGIAMKN--------ILKNLSTLDIEPAGLKGIIVTHEHT 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGL-LEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L L +P+YA GL E ++ + + + + + Sbjct: 60 DHVKGIGPLARKLGIPIYA---TAGLWAEMNGSIGKIGSEQRVVVEREM---MLAGMQVN 113 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD 165 +H E+ + IR + D Sbjct: 114 LFETSHDSRESYGIKIREGRLALGIATD 141 >gi|291543358|emb|CBL16467.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus sp. 18P13] Length = 260 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 13/127 (10%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 ++ID GVS + D P + IFITH H DH L + L VP Sbjct: 25 VLIDAGVSCKRLMQALGDCGIP--------ESAIRGIFITHDHSDHIKGLRMVTKRLKVP 76 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 VYA LE E ++ P + V G + + + H ++ IR Sbjct: 77 VYAQAQT---LEKLIAGEHLAPGCPAQVME--GAVTAGDAELTAFDIPHDTVQSCGYRIR 131 Query: 155 SPVGNIV 161 + G Sbjct: 132 TGDGRTC 138 >gi|295318535|gb|ADF98912.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 454 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 R + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IRD-IDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|255326295|ref|ZP_05367381.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa ATCC 25296] gi|255296749|gb|EET76080.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa ATCC 25296] Length = 297 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 44/202 (21%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERK--NLMAIFITHA 76 + + + R W I++D G + G+ + + ++ AI I+H Sbjct: 20 SCYMLTATDFAGRTWRIIMDMG-----NGSLGM---------LQRHIDLSDIDAILISHL 65 Query: 77 HEDHY---GAL-------HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC------ 120 H DH L W +P+Y + E + Sbjct: 66 HPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGP---AAINEYLSATHGLDPDPGMSTEFEY 122 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDK 180 ++ G+ V +G F +E RV H + AL I + D TD Sbjct: 123 HTWTEGEPVQIGPFRVEPFRVVHPSKDPYALRITCNDREGHTVFSYSGD--------TDL 174 Query: 181 DSLCAIGNEGILALMCDSTNAM 202 G +C++ Sbjct: 175 CEGLVKAARGADLFLCEAAYQE 196 >gi|308174272|ref|YP_003920977.1| metal-binding hydrolase [Bacillus amyloliquefaciens DSM 7] gi|307607136|emb|CBI43507.1| putative metal-binding hydrolase [Bacillus amyloliquefaciens DSM 7] Length = 207 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 17/113 (15%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--- 116 +I + +A+ +THAH DH GAL ++ VPVY E K + + Sbjct: 35 YIKENNLKPLAVLLTHAHFDHIGALDEVRDRWDVPVYLHK-----NEEKWLEDSSLNGSG 89 Query: 117 ---------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +D+G F +E++ P +++ ++ I Sbjct: 90 ILRGIAVTARPADRLIEGDGVLDIGPFHLETLFTPGHSPGSVSYYVKDADLVI 142 >gi|296273150|ref|YP_003655781.1| beta-lactamase-like protein [Arcobacter nitrofigilis DSM 7299] gi|296097324|gb|ADG93274.1| beta-lactamase-like protein [Arcobacter nitrofigilis DSM 7299] Length = 197 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 18/147 (12%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + K +ID PGV+ + +I + N + I TH H DH + Sbjct: 15 CYIASIDNKDFIID----------PGVNAI----EWIKQNVTNPVVILNTHGHFDHVWSN 60 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +++ + +Y +LE ++ P I ++ D ++ Sbjct: 61 YEVSQEFGLKIYCPKDDAFMLEKDPYGFGMTPSHPDILVNEDEEFDFDGTIVKYHFFPGH 120 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDD 171 P A+ I + +GD+ Sbjct: 121 TPGCSAIEINGN----LFSGDFIFKGT 143 >gi|226323676|ref|ZP_03799194.1| hypothetical protein COPCOM_01451 [Coprococcus comes ATCC 27758] gi|225207860|gb|EEG90214.1| hypothetical protein COPCOM_01451 [Coprococcus comes ATCC 27758] Length = 539 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 64/462 (13%), Positives = 130/462 (28%), Gaps = 97/462 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + I+IDCG+ D + P Sbjct: 1 MKLTFI--GAAHEVTGSCHYLEACGKH----ILIDCGLEQGPD--LYENQEIP------I 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YE 112 + I +THAH DH G + L + + L Sbjct: 47 NPSMIDYILLTHAHIDHSGKIPLLVKNGFKGEIICTFATSDLCSIMLRDSAHIQESEAEW 106 Query: 113 RVSK---------KIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMA 150 R K + A + V + + V H + + Sbjct: 107 RNRKALRSGAPLYEPLYTVQDAMNAVALLAPIDYNQTIQLCKGIELRFTDVGH-LLGSSC 165 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVT-DKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + + + + D I + D + L+ +ST R + + Sbjct: 166 IEVWITEDGVSKKIVFSGDVGNIDQPIIKDPQ-----HVDAADYLVIESTYGNRVHSTVK 220 Query: 210 EKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKRVVS 266 IK + G V++ +F+ V R + ++ +I ++ + + V Sbjct: 221 PDYIKDLTRVLRETFAKGGNVVIPSFA--VGRTQELLYFIREIKENNLLPEYQNFEVYVD 278 Query: 267 VAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMRNVKLAEK 325 + + Q + + + + +I+ G L ++ E + + +K Sbjct: 279 SPLAIEATNVFQKNV----QSCFDEDAMALISKGINPLLFQGLKTTITSEESKMINFNDK 334 Query: 326 DTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC---------------------- 363 VI S+ + H+K+ L + ++ + Sbjct: 335 PKVIISASGMCEAGRIRHHLKHNLWRKECTILFVGYQAVGTLGRKLVESKPESVRLFGEN 394 Query: 364 ---------PVHVSGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 +SGH N L +P + +HGE Sbjct: 395 VEVNARIEVLAGISGHADMNGLLNWIDGFKEKPSHIFVVHGE 436 >gi|213408198|ref|XP_002174870.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces japonicus yFS275] gi|212002917|gb|EEB08577.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces japonicus yFS275] Length = 573 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 101/339 (29%), Gaps = 31/339 (9%) Query: 67 NLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + + F++H H DHYG L W H P+Y S LLE K Sbjct: 216 KIDGVEAYFLSHFHSDHYGGLSSSW--CHGPIYCSSVTGRLLENIL----HVDKKYIKCL 269 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILGDVTD 179 + +V ++ + NH P + + + ++HTGD++ I + Sbjct: 270 SENEPHNVYGVTVFVIPANH-CPGSSIFLFETIHSEGTKRVLHTGDFRACRAHIEHPL-- 326 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK----GCVLVTTFSS 235 + ++ I L D+T + ++ + + + + +LV + Sbjct: 327 ------LRDKHIHRLYLDTTYLDPKYMLPAQSEVVNACAEKCRLLQEADASRLLVVVSTY 380 Query: 236 SVSRIRSIIDIAEQIGRKIVLLG--SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 S+ + + + IA+ + I + + + ++ D S + Sbjct: 381 SIGKEKVAVAIAKALKTLIYVDDRKRKILDQLEDEELQQLLTDDPNTASVHMATMMQTHP 440 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAE-KDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 + + + R ++ + + + S R + Sbjct: 441 EAL--SDYLNKRRPTFDRIVSFRVTGWEYRPKGKKLSVVSNLNSILTSPPAPFGPRDLRM 498 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H DL + V++ Sbjct: 499 ARGSSPSCVSFLAPYSEHSSFYDLSVFCSALDVDVIIPT 537 >gi|16332017|ref|NP_442745.1| hypothetical protein sll0514 [Synechocystis sp. PCC 6803] gi|2496795|sp|Q55470|Y514_SYNY3 RecName: Full=Uncharacterized protein sll0514 gi|1001329|dbj|BAA10816.1| sll0514 [Synechocystis sp. PCC 6803] Length = 554 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 130/377 (34%), Gaps = 37/377 (9%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH- 92 I++DCG+ +D P L+ D + +F +HAH DH L LW F Sbjct: 39 RILLDCGL---EDLTP---LLAADPG-------TVDLVFCSHAHRDH--GLG-LWQFHQQ 82 Query: 93 ---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +P+ AS LL E V + +++ +V G ++E + H +P Sbjct: 83 FPHIPILASEVTQRLLPLNWPDEFVPPFCRVLPWRSPQEVLPG-LTVELLPAGH-LPGAA 140 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR--EGTC 207 +++ G+ ++ + D + D +L + L+ + R Sbjct: 141 LILLEYHNGDRLYRVIYTGDYCLSHLQLVDGLALTPLRGLKPDVLILEGHYGNRRLPHRR 200 Query: 208 ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSR--IRSIIDIAEQIGRKI-VLLGSSLKRV 264 EK + I ++ + +L+ +++ ++ + + GR++ + G S+ R Sbjct: 201 QQEKQFIQAIETVLAKGRN-ILLPVPPLGLAQEILKLLRTHHQFTGRQVNLWAGESVARG 259 Query: 265 VSVAIDVGIIKKDQLFL------SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMR 318 GII + + L + SA + + Sbjct: 260 CDAYQ--GIIDHLPDNVRNFAQHQPLFWDDKVYPHLRPLTDDQGELSLSAPSIVITTTWP 317 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKR 378 + + +P + N Q + + ++ H + + Sbjct: 318 AFWPSPAALPGLWTVFMPQLLTLPSCLVN-FAWQDLEEFPKYELEDYLLADHSDGRNTTQ 376 Query: 379 MYQWIRPQVLVAIHGEP 395 + +RPQ LV +HG+P Sbjct: 377 LIHNLRPQHLVFVHGQP 393 >gi|150390119|ref|YP_001320168.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949981|gb|ABR48509.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 206 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 23/154 (14%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G+N + + K ++D G D D + I + L I +TH H Sbjct: 12 GVNCYVIS--DDETGKAAVVDPG----GD----ADKIL---ELIKDNQFELTHILLTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF------QAGDKVDV 131 DH GA+++L PVY + +L+ + P ++ + G+ + + Sbjct: 59 GDHIGAVNELHEKTKAPVYVHEDDLYILKDANINYSARMGGPVVTIDTDVFLKDGEVLTI 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G + + P + + +V TGD Sbjct: 119 GNLKLHVLHTPGHSPGGVCI----RGEGVVFTGD 148 >gi|150004778|ref|YP_001299522.1| putative hydrolase [Bacteroides vulgatus ATCC 8482] gi|149933202|gb|ABR39900.1| metal-dependent hydrolase [Bacteroides vulgatus ATCC 8482] Length = 258 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 78/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLSILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGRMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHHTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHIG 234 >gi|225386907|ref|ZP_03756671.1| hypothetical protein CLOSTASPAR_00655 [Clostridium asparagiforme DSM 15981] gi|225046919|gb|EEG57165.1| hypothetical protein CLOSTASPAR_00655 [Clostridium asparagiforme DSM 15981] Length = 217 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 16/99 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + + LG V N + + +S++ +++D P D+ P + + Sbjct: 1 MSDLRIKTCVLGAVS---TNCYIL--YNCTSKEAVIVD-----PGDNAPYI------MNK 44 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP 99 + +A+ +TH H DH A+ +L HVPVYAS Sbjct: 45 CRELDVKPVAVALTHGHFDHILAVPELSRSFHVPVYASA 83 >gi|94269022|ref|ZP_01291351.1| Beta-lactamase-like [delta proteobacterium MLMS-1] gi|93451375|gb|EAT02235.1| Beta-lactamase-like [delta proteobacterium MLMS-1] Length = 261 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 65/202 (32%), Gaps = 42/202 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL------PGVDLVFPDI 58 EL F LGG + N GS ++ID G F +L GV+ Sbjct: 3 ELKFAVLGGGSK--GNATYVEAGS----SRLLIDAG--FSGRELESRLAALGVE------ 48 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 L AI ++H H DH L H+P+ + + + K + Sbjct: 49 ------PGQLTAILLSHEHGDHIRGAGVLSRRHHLPLLLNKATLAAA-----GRELGKPV 97 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 F G G F I ++H E + ++R+ + H D + Sbjct: 98 AIQEFTTGRSFTCGDFQIHPFALSHDAAEPVGFLLRAGGRTLGHCTDLGV---------- 147 Query: 179 DKDSLCAIGNEGILALMCDSTN 200 L G AL+ + + Sbjct: 148 -VSRLVRHRLSGCQALVLECNH 168 >gi|94971352|ref|YP_593400.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94553402|gb|ABF43326.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 265 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 +++D G+S K+ L + D T + AI ITH H DH L+ L L +P Sbjct: 24 LLVDAGLS-CKETLIRLRASGCDQTSLS-------AILITHEHSDHIAGLNVLAKKLRIP 75 Query: 95 VYASPFA-IGLLEAKRVYERVSKKIPCISFQAGDK-VDVGAFSIESVRVNHSIPETMALV 152 V+ + L R + ++ + + +G +I + H + + Sbjct: 76 VFITASTQRAYLRMARDSQGNKVRLERVENFEAGRSFQIGDIAITPFTIPHDAADPVGFT 135 Query: 153 IRSPVGNIVHTGDWKL 168 R+ D Sbjct: 136 FRAEGIKAAIATDLGY 151 >gi|317154502|ref|YP_004122550.1| beta-lactamase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944753|gb|ADU63804.1| beta-lactamase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 208 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 37/191 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+ + LG E N L G + ++ID GV D Sbjct: 1 MQKLTVETFVLG-PDE--TNCYLLSAG----GEAVVIDAGV---------------DPAR 38 Query: 61 IMKERKN----LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK 116 + + L +++TH H DH G +L PVY SP L+ + + Sbjct: 39 LAARIEEQELALRGVYLTHFHIDHAGGAGELRERFGAPVYVSPLD-DFLKDISLEAGGVR 97 Query: 117 KIPCISFQAGDKVDVGAFSIESVR-----VNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++ + + G ++ P +++ P V GD Sbjct: 98 ELAQYLDFPSEPLGPGRRTVLGQPMVVLDTPGHTPGSLSFFF--PAAGCVFVGDLLF--- 152 Query: 172 AILGDVTDKDS 182 I TD Sbjct: 153 MIAVGRTDLPR 163 >gi|269140169|ref|YP_003296870.1| hydroxyacylglutathione hydrolase [Edwardsiella tarda EIB202] gi|267985830|gb|ACY85659.1| hydroxyacylglutathione hydrolase [Edwardsiella tarda EIB202] gi|304560002|gb|ADM42666.1| Hydroxyacylglutathione hydrolase [Edwardsiella tarda FL6-60] Length = 251 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 31/180 (17%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HV 93 +++D GV+ P + ++ + R AI +TH H DH G + ++ + Sbjct: 25 LIVDPGVA------------APVLHYLTENRITPKAILLTHHHNDHIGGVAEIVQAYPEL 72 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVY GL GD + I + + + Sbjct: 73 PVYGPAETQGL-------------GSTQIVADGDTFSLLGCQISVMALPGHTLGHVGYYS 119 Query: 154 --RSPVGNIVHTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGTCISE 210 G+ + + + + D + + + + C Sbjct: 120 APYLFCGDTLFSAGCGRLFEGSAQQMFDSLQRIMQLPDN--TLVCCAHEYTESNLRFARH 177 >gi|114319651|ref|YP_741334.1| beta-lactamase domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226045|gb|ABI55844.1| beta-lactamase domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 463 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 76/287 (26%), Gaps = 63/287 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F G ++ + L G + +++DCG+ + Sbjct: 1 MQIEFF--GAARQVTGSCFLIHCG----KSRVLVDCGLIQGGRKQEERNREPFPFD---- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVS------- 115 L A+ +THAH DH G + L +Y L Sbjct: 51 -PTRLDAMVLTHAHLDHSGRIPQLVEAGFQGRIYTQRATRDLCRIMLKDAGFLAEKDAEI 109 Query: 116 --------------KKIPCISFQAGDKVDV------------GAFSIESVRVNHSIPETM 149 K + + H I + Sbjct: 110 ENRKRQRQHLPPDVKPTYTVEQAEASIRSFRAVDYDQVIDVADGVRLRLQEAGH-ILGSA 168 Query: 150 ALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + +GD D IL + + E ++ +ST R Sbjct: 169 VAELWLEQGGKRRKVAFSGDLGHSDAPILC---NPARI-----EDADLVILESTYGDRLH 220 Query: 206 TCISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 E + + I + +G +LV F+ V R + ++ + + Sbjct: 221 RSWDETWNELGEIIANARAE-RGNILVPAFA--VGRTQELLYVLGRN 264 >gi|312796679|ref|YP_004029601.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Burkholderia rhizoxinica HKI 454] gi|312168454|emb|CBW75457.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Burkholderia rhizoxinica HKI 454] Length = 258 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 17/164 (10%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G N L ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSD---GNSLLVEAQDGTTTTRVLLDCGFSARELER--------RLARLDVT 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI ITH H DH G+ + +P+Y S + A ++ + Sbjct: 50 LDALHAIVITHEHADHIGSALAVARRASIPLYMSWGTAQAVGA-----DDARGVEWRVLW 104 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G+ V +G V H E + V + D Sbjct: 105 GGEPVGIGDLEWLPYTVPHDAREPLQFVFGDGQHRVGVLTDVGT 148 >gi|91975269|ref|YP_567928.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] gi|91681725|gb|ABE38027.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 244 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 36/188 (19%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDIT 59 +L F+ G G G G + S+ +IDCG + P G+ Sbjct: 1 MQLRFVGCGDAFGSG--GRLNTCFHVSGESAN--FLIDCGATTLPALKRYGI-------- 48 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYE- 112 R L I ITH H DH+G L L V A P I + + + Sbjct: 49 ----SRDALDLILITHFHGDHFGGLPFLLLDAQFAKRKRPLVIAGPLGIDIRLTRLMEAL 104 Query: 113 -------RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV--IRSPVGNIVHT 163 + + + ++ + GA ++ V H I + + ++ Sbjct: 105 FEHSSATKPTFDLQVVALEPAVPQTFGAVTVTPFPVVHGDSGGPFFAYRIEAEGRTLAYS 164 Query: 164 GDWKLDDD 171 GD + D Sbjct: 165 GDTQWTDT 172 >gi|328554219|gb|AEB24711.1| YqgX [Bacillus amyloliquefaciens TA208] Length = 212 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 17/113 (15%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--- 116 +I + +A+ +THAH DH GAL ++ VPVY E K + + Sbjct: 40 YIKENNLKPLAVLLTHAHFDHIGALDEVRDRWDVPVYLHK-----NEEKWLEDSSLNGSG 94 Query: 117 ---------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +D+G F +E++ P +++ ++ I Sbjct: 95 ILRGIAVTARPADRLIEGDGVLDIGPFHLETLFTPGHSPGSVSYYVKDADLVI 147 >gi|300728185|ref|ZP_07061556.1| lipoate-protein ligase B [Prevotella bryantii B14] gi|299774611|gb|EFI71232.1| lipoate-protein ligase B [Prevotella bryantii B14] Length = 261 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 74/247 (29%), Gaps = 48/247 (19%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGAL- 84 I+ID G PDI + + + A+ +THAH DH G + Sbjct: 44 IEDEHTRILIDAG---------------PDIRQQLLQVPFRKIDAVLVTHAHYDHVGGMD 88 Query: 85 ---HDLWSFLHVPVYASPFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVG 132 +F + ++ + AI L Y K+ S + +K+ G Sbjct: 89 DLRPYCKAFGDINIFGNETAIVSLRQMLPYCFPKDASLLYPGVPKLKLHSIKPHEKLSFG 148 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 I + V H ++ G + D K D+ ++ G+ Sbjct: 149 EIEITPISVMHD----KLPILGYRFGKFAYITDMKSMDNEEYTYLS-----------GVK 193 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 L+ ++ + S + + I K V + + + I + G Sbjct: 194 VLVVNALRFDKPHH--SHQLVDDAIALAQKINAQKVYLIHVTHDIG-IHCEANKKLPEGI 250 Query: 253 KIVLLGS 259 G Sbjct: 251 CFAYDGM 257 >gi|332878360|ref|ZP_08446084.1| metallo-beta-lactamase domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683685|gb|EGJ56558.1| metallo-beta-lactamase domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 255 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 90/280 (32%), Gaps = 60/280 (21%) Query: 6 LVFLPLG-----GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSFPKDDL 48 + LG GV +IG + + + + I++DCG P Sbjct: 1 MKITFLGTGTSTGVPQIGCSCKVCRSTDARDKRLRTSVLVETEQTRILLDCG---PDFRQ 57 Query: 49 PGVDLVFP-DITFIMKERKNLMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAIGL 104 + P D + A+ +TH H DH G + DL F V +YAS G Sbjct: 58 ----QILPLDFR-------RIDAVLLTHEHYDHVGGIDDLRPFGVFGDVQLYASERTGGQ 106 Query: 105 LEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 L ++ + + + VG + + V H ++ VG Sbjct: 107 LRQSLPYCFVEHKYPGVPQLRLHAVRPHEAFRVGELQVTPIEVMH----ARLPILGYRVG 162 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + + D K D+ L + +G+ L+ N +R S + I++ Sbjct: 163 RMAYITDMKTIADSELDYL-----------QGLDLLI---LNGLRHEPHYSHQTIEEACA 208 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + + + ++ D G ++ G Sbjct: 209 FARRLCVPRTYLIHMGHHID-LHAVEDDRLPEGVRMAYDG 247 >gi|331082836|ref|ZP_08331958.1| hypothetical protein HMPREF0992_00882 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400165|gb|EGG79814.1| hypothetical protein HMPREF0992_00882 [Lachnospiraceae bacterium 6_1_63FAA] Length = 535 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 71/371 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + ++ K ++DCG+ D D+ Sbjct: 1 MKLTFI--GAAHEVTGSCYFLE----AAGKKFIVDCGMEQGPDQYENQDIPVA------- 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV------------ 110 L +THAH DH G + + P+YA+ L + Sbjct: 48 -ASELDFALLTHAHIDHSGNFPLIHARGFRGPIYATAATCDLCDIMLRDSAHIQMFEAEW 106 Query: 111 -------------------YERVSKKIPCISFQAGDKVDV-GAFSIESVRVNHSIPETMA 150 + + + + + + V H + + + Sbjct: 107 RNRKAKRNGQTEFVPAYTMEDALGVIQQFVECNYNQVIQIAEGIKVRFVDAGH-LLGSAS 165 Query: 151 LVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + IV +GD + ++ D DS ++ +ST R Sbjct: 166 IELWITEDGEERKIVFSGDIGNTEQPLIKDPEYLDS--------ADYVVMESTYGDRSHG 217 Query: 207 CISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGR-KIVLLGSSLKR 263 + + + + K G V++ +F+ V R + ++ +I ++ + + Sbjct: 218 EKPDYVTELVEILRKTFKRG-GNVVIPSFA--VGRTQEMLYFLRKIKEDNMLPEFAGFEV 274 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKL 322 V + V + S+ Y E + +I G L ++ E R + Sbjct: 275 YVDSPLAVQATSIFKEHYSEC----YDEEAMELINKGINPIAFPGLKLSITSDESRAINF 330 Query: 323 AEKDTVIFSSR 333 E VI S+ Sbjct: 331 NETPKVILSAS 341 >gi|328912614|gb|AEB64210.1| hypothetical protein LL3_02677 [Bacillus amyloliquefaciens LL3] Length = 214 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 17/113 (15%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK--- 116 +I + +A+ +THAH DH GAL ++ VPVY E K + + Sbjct: 42 YIKENNLKPLAVLLTHAHFDHIGALDEVRDRWDVPVYLHK-----NEEKWLEDSSLNGSG 96 Query: 117 ---------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + +D+G F +E++ P +++ ++ I Sbjct: 97 ILRGIAVTARPADRLIEGDGVLDIGPFHLETLFTPGHSPGSVSYYVKDADLVI 149 >gi|167720307|ref|ZP_02403543.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei DM98] gi|217420366|ref|ZP_03451871.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] gi|217395778|gb|EEC35795.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] Length = 258 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMK 63 + F LG E N + + ++ +++DCG S + + L +DL Sbjct: 1 MRFASLGSGSE--GNGLVVEASNGATTTRVLLDCGFSAKELERRLARIDL---------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L AI +TH H DH G L +P+Y S + A + Sbjct: 49 RVDDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + VG + V H E + V + D + Sbjct: 103 WSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|156341423|ref|XP_001620755.1| hypothetical protein NEMVEDRAFT_v1g147152 [Nematostella vectensis] gi|156206058|gb|EDO28655.1| predicted protein [Nematostella vectensis] Length = 71 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 55 FPDITFIM---KERKNLMAIFITHAHEDHYGALHDLWSF--LHVPVYASPFAIGL 104 FPD +I K ++L + I+H H DH GAL P+Y + + Sbjct: 3 FPDFDYITRSGKLTEHLDCVLISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAI 57 >gi|332707235|ref|ZP_08427288.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Lyngbya majuscula 3L] gi|332353969|gb|EGJ33456.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Lyngbya majuscula 3L] Length = 543 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 60/444 (13%), Positives = 138/444 (31%), Gaps = 58/444 (13%) Query: 2 KNEELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 +++ L P G G + L G I++DCG+ +D + P Sbjct: 12 QDDRLTCFPYGVGHGAEGV---CLLVQMGP----HRILLDCGLE--DISPLQIDGIPPA- 61 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVY---ERV 114 + +HAH DH L L +P+YAS LL E + Sbjct: 62 ----------DLVLCSHAHSDHSQGLLALHQTFPQLPIYASEVTTQLLLLNWPELPPEDI 111 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDWKLDD 170 + + + G + + H +P A ++ + +++TGD+ L + Sbjct: 112 LPFCQALPWVTPVEFCEG-LTAQLFPAGH-LPGAAAFLLTYTTRHRTYRLLYTGDFFLSN 169 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGCV 228 ++ ++ L ++ ++ + + A E + + I + V Sbjct: 170 SRLVEGLS----LESLRGTQPDVVIVEGSYGTARHPHRRQQENQLVERIEQAIATNNSVV 225 Query: 229 LVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDES 285 L ++ + I+ + G L V+ + G ++ F S Sbjct: 226 L---PVPTLGLGQEILMLLRSHH---HFTGRDLDIWVNGNVAAGCNAYLELLSHFPSSVQ 279 Query: 286 FGLYPREQLIVIATGSQGEPRSALAQLSRGEMR-----NVKLAEKDTVIFSSRAIPGNEV 340 + + + + G+ ++ + ++ +R+ + Sbjct: 280 NFARHQALFWDERVRPRVRRLDLQHRDAIGKSPCIILTDLNMDWREYWQQENRSWVVLQP 339 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 + + ++ H ++ +RPQ ++ +HG P +L Sbjct: 340 EHLKSLD-----PIDEYGSLKVETYLLAQHGDCLGTTQLIHNLRPQHVIFVHGSPTYLAD 394 Query: 401 HKELALQEGIACVPPVRNGKMLRL 424 L + + G ++ L Sbjct: 395 LAGLEELQNRYHLHTPAAGTLVEL 418 >gi|326497347|dbj|BAK02258.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326532736|dbj|BAJ89213.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 638 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 100/327 (30%), Gaps = 34/327 (10%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+THAH DH VYA+ + L + + + + G ++V Sbjct: 27 FLTHAHRDHLVGAAGAGPGGGGAVYATRLTLSLA---LRHFPQLDQGEFVEVEEGRTIEV 83 Query: 132 ----GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 GAFS+ + NH P + + G+I+HTGD +L D + G Sbjct: 84 DDPAGAFSVTAYDANH-CPGAVMFLFEGEFGSILHTGDCRLTPDCAQNLP--LKYIAKKG 140 Query: 188 NEGI---LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 E + + D T + S++ + + + V + ++ Sbjct: 141 KENVCRLDFVFLDCTFSKCFLKLPSKELAIQQVIACIWKHPDAPFVYLACDLLGHEEILV 200 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 +++ G KI + R + + + + Sbjct: 201 EVSRTFGSKIYVDVR---RNSDCFKALSLTAPEIITDDPSCRFQIV----------GFHH 247 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 ++ G L + I S N+ + Sbjct: 248 LYDNASKKLEG--ARASLQPEPLFIRPSTQWYACGR------NQKPSLTEAQQDDFGIWH 299 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H ++L++ Q ++PQ +++ Sbjct: 300 VCFSIHSSRDELEQAMQLLQPQWVIST 326 >gi|326803511|ref|YP_004321329.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651108|gb|AEA01291.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 212 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 73/217 (33%), Gaps = 40/217 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + +++ ++ID G S + + I K + +A+ ITH H D Sbjct: 15 NTYLV--YNEQNKEALIIDPGSSAGRIR-----------SEIQKLQLKPLAVLITHGHCD 61 Query: 80 HYGALHDLWSFLHVPVY---------------ASPFAIGLLEAKRVYERVSKKIPCISFQ 124 H GAL D+ + +PVY SPF IGL ++ + +Q Sbjct: 62 HIGALDDIRQYYQIPVYINQAESPWLSDPMYNMSPF-IGL-------GHLTFQAADSYYQ 113 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDS 182 + +G+ S + + L + + TGD D + Sbjct: 114 DDQEQSIGSISFTPIHTPGHTHGSTCLFFNNSDHPFMMTGDTLFKGTIGRTDFPGGDSQA 173 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + + L + + G S ++ + + Sbjct: 174 IMQSIPRKLFTLPDQTL--VYPGHYGSSTIAEEKLTN 208 >gi|194038276|ref|XP_001926907.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Sus scrofa] Length = 515 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 68/362 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L L+ DS NA ++ ++ + ++ Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSR-----PSLLITDSFNATYVQPRRKQRD-EQLLTNV 223 Query: 221 MK--NAKGCVLVTTFSS----SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 ++ G VL+ ++ ++++ I + G + + ++ Sbjct: 224 LETLRGDGSVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALL 269 Query: 275 KKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + S ++L+ + P + ++ V+ +S Sbjct: 270 NNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLAS 329 Query: 333 RA 334 + Sbjct: 330 QP 331 >gi|94264292|ref|ZP_01288085.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] gi|93455258|gb|EAT05468.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [delta proteobacterium MLMS-1] Length = 530 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ELV+ GG + ++ + S +ID G D + + Sbjct: 27 ELVYFGRGGQQTVSGSLHVL----KSPDGLYLIDVGRFIGDDG--------ANYPWPEDI 74 Query: 65 R-KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 + A+FITH H DH G L L P+ S + + Sbjct: 75 PVGEIKAVFITHTHADHIGRLPLLLRQGYRGPILLSRASYEIARLNL 121 >gi|257457788|ref|ZP_05622949.1| metallo-beta-lactamase family protein [Treponema vincentii ATCC 35580] gi|257444838|gb|EEV19920.1| metallo-beta-lactamase family protein [Treponema vincentii ATCC 35580] Length = 321 Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 61/214 (28%), Gaps = 30/214 (14%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G IG N + I+ D G + G++L + + + +F + Sbjct: 56 GTIGGNTTCVEVETEEGNH-IIFDAGTGIRE---LGINLQN-RFDYFDRPQTY--HLFFS 108 Query: 75 HAHEDHYGALHDLWSFLH----VPVYASPFAIGLLEAKRVYERVSKKIPCISF------- 123 H H DH L + VY++ + + P F Sbjct: 109 HFHWDHVQGLPFFGPAYDSRNTIIVYSTRP---KMREFLEEQMKWPYFPITMFGKGGFTA 165 Query: 124 --------QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + +G I RV H +A I I+ + D +L Sbjct: 166 KFEFRCIAPDEPYIHIGNTKIGWHRVRHP-GGCVAYSIFDNQKKIIFSTDTELRPQDFEK 224 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + T+ + I A + + + G S Sbjct: 225 NDTNIAFYSDVELLIIDAQYTMTDSIEKIGWGHS 258 >gi|260587065|ref|ZP_05852978.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|260542555|gb|EEX23124.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] Length = 535 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + ++ K ++DCG+ D D+ Sbjct: 1 MKLTFI--GAAHEVTGSCYFLE----AAGKKFIVDCGMEQGPDQYENQDIPVA------- 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 L +THAH DH G + + P+YA+ L + Sbjct: 48 -ASELDFALLTHAHIDHSGNFPLIHARGFRGPIYATAATCDLCDIMLRD 95 >gi|296208908|ref|XP_002751323.1| PREDICTED: DNA cross-link repair 1B protein [Callithrix jacchus] Length = 545 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 86/263 (32%), Gaps = 24/263 (9%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRHLQVSKQWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGRETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 I L D+TN S + I +++ + S + + + +A Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEAAHQIIQLIRKHPQHNIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV--IATGSQGEPR 306 + +VL L+ + +G+ + + ++ + +Q P Sbjct: 196 EFQTWVVLSPRRLE----LVQLLGLADVFTVEENAGRIHAVDHMEICYSNMLHWNQTHPT 251 Query: 307 SAL---AQLSRGEMRNVKLAEKD 326 + ++ R ++ + Sbjct: 252 IGILPTSRKIRSSHPDIHVIPYS 274 >gi|126311625|ref|XP_001382039.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 567 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 14/159 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP + L+ + + + + D+ Sbjct: 28 FLTHLHADHTEGLSSTWAR---PLYCSPLSARLVHRRLQVSKQWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + +G Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLQEPA------LRLGK 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 + I L D+TN S + I ++++ Sbjct: 138 Q-IHTLYLDNTNCDPSLVLPSRQEATHQITELIRQHPQH 175 >gi|268609242|ref|ZP_06142969.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Ruminococcus flavefaciens FD-1] Length = 532 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 109/372 (29%), Gaps = 75/372 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +G E+ + K ++D G+ +D V + Sbjct: 1 MKMTFIGATHEVTGSCTYIEAC----GKKFLVDFGMEQGEDIYENVQIPTA--------P 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLL-----------------EA 107 N+ + +THAH DH G L L++ ++A+ L + Sbjct: 49 GNIDFVLLTHAHIDHSGLLPLLYAGGFKGEIHATDATANLCSVMLRDSAHIQEFEAEWRS 108 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG--------- 158 ++ R + + + F + I E + + R Sbjct: 109 RKAERRGEQPYEPLYTMDDALGAIELFVPHRYETSVDICEGINVYFRDAGHLLGSSSIIL 168 Query: 159 ---------NIVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 IV +GD + + D+ ++ +ST R Sbjct: 169 TLTEDGVTKKIVFSGDIGNTNQPLIRDPQYIDEA----------DYVVMESTYGNRVHDR 218 Query: 208 ISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 ++ K + + + + G V++ +F+ V R + ++ +I L R Sbjct: 219 PTDYVKALAQVLQETFDRG-GSVIIPSFA--VGRTQEMLYFLRKIKVD------GLVRNH 269 Query: 266 SV--AIDVGIIKKDQLFLSDESFGL-YPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVK 321 + + + + Y E L + G L + +S + R + Sbjct: 270 DGFPVYVDSPLANEATDIFISNRESCYDEEALSYVRQGINPLFFDDLIRTVSSDDSRAIN 329 Query: 322 LAEKDTVIFSSR 333 + VI S+ Sbjct: 330 SDSRPKVIISAS 341 >gi|195062921|ref|XP_001996278.1| GH22402 [Drosophila grimshawi] gi|193899773|gb|EDV98639.1| GH22402 [Drosophila grimshawi] Length = 623 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 101/326 (30%), Gaps = 49/326 (15%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY L P+Y SP L+E V V Sbjct: 271 FLSHYHADHYVG---LTRKFAHPLYMSPITARLVEKFI----PIDSQFVHEIDVDKSVVV 323 Query: 132 GAFSIESVRVNHSIPETMALVI-RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + ++ NH P + L+ S I+HTGD++ + + Sbjct: 324 KDIEVTAIDANH-CPGAIMLLFKFSTGKCILHTGDFRASFEMESLPIF-------WNEPN 375 Query: 191 ILALMCDSTN-AMREGTCISEKGIKKNIYDIM----KNAKGCVLVTTFSSSVSRIRSIID 245 I L D+T A C I + KNA +L S + + + + Sbjct: 376 IDLLYLDTTYLAKNYDFCHQSDSIYSACSLVQKFHEKNASKRILHVCGSYLIGKEKVWLA 435 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 +AE+ G ++ + + +L L +I + S + Sbjct: 436 LAEEFGLRVWTEP-------HRRKAIDCLNWPELQLVLSDDPFDANLHVIGMGKISYPQL 488 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 Q + + +S+ G +++ ++ Sbjct: 489 DQYFKQFESQFDMLLGIRP-SGWEKNSKPSYGKRISVIGVE------------------- 528 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+R ++++P +++ Sbjct: 529 -YSEHSSYKELERFVRFLKPTNVIST 553 >gi|154503853|ref|ZP_02040913.1| hypothetical protein RUMGNA_01679 [Ruminococcus gnavus ATCC 29149] gi|153795452|gb|EDN77872.1| hypothetical protein RUMGNA_01679 [Ruminococcus gnavus ATCC 29149] Length = 536 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 72/503 (14%), Positives = 151/503 (30%), Gaps = 110/503 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKD--DLPGVDLVFPDITFI 61 +L F+ G E+ + L + I+IDCG+ D + PG+ + ++ + Sbjct: 1 MKLTFI--GAAHEVTGSCHLLQAAGKN----ILIDCGMEQGPDLYENPGLPIAAGEVDY- 53 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP- 119 +F+THAH DH G L L + + L ++ Sbjct: 54 ---------VFLTHAHIDHSGLLPLLCKNGFKGQILTTFATADLCNIMLRDSAHIQEFEA 104 Query: 120 ------------------------------CISFQAGDKVDV-GAFSIESVRVNHSIPET 148 + G+++ + I V H + + Sbjct: 105 EWRNRKGRRAGVPEFEPLYVMADAEAAINLFVPCGYGERLHICDGVEIRFTDVGH-LLGS 163 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAI--LGDVTDKDSLCAIGNEGILALMCDSTNAM 202 ++ + IV +GD + I TD ++ +ST Sbjct: 164 ASIEVWITEGEISRKIVFSGDVGNVNQPIIKDPRCTDTA----------DYVVVESTYGN 213 Query: 203 REGTCISEKGIKK--NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK-IVLLGS 259 R + + + I +A G V++ +F+ V R + ++ +I ++ S Sbjct: 214 RVHSSEKIDYVSEFTRILKETFDAGGNVVIPSFA--VGRTQEMLYFIREIKEHGLLPEYS 271 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL-AQLSRGEMR 318 + + + + K + + + E + ++ G L ++ + + Sbjct: 272 DFEVYLDSPLAIEATKVFTKNMREC----FDEEAIKLVDEGINPLVFPGLKTSVTSDDSK 327 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV---------------------- 356 + EK VI S+ + H+K+ L + + Sbjct: 328 LINFIEKPKVIISASGMCDAGRIRHHLKHNLWRKECTILFVGYQANGTLGRRLLEGEKNI 387 Query: 357 --------IAEDAECPVHVSGHPYPNDLKRMYQWIR-P-QVLVAIHGEPLHLVAHKELAL 406 + E +SGH N L + + P Q + +HGE + Sbjct: 388 KLFGEPIEVHARIESLHGISGHADMNGLIAWLKGFKTPLQHVFVVHGEDTVTEEFAQKVE 447 Query: 407 QEGIACVPPVRNGKMLRLFPDPI 429 + + L + I Sbjct: 448 ETLGCPTWAPFPNGEVDLAANEI 470 >gi|15225548|ref|NP_182094.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana] gi|3386625|gb|AAC28555.1| hypothetical protein [Arabidopsis thaliana] gi|20197051|gb|AAM14896.1| hypothetical protein [Arabidopsis thaliana] gi|28973723|gb|AAO64178.1| unknown protein [Arabidopsis thaliana] gi|29824257|gb|AAP04089.1| unknown protein [Arabidopsis thaliana] gi|110736829|dbj|BAF00373.1| hypothetical protein [Arabidopsis thaliana] gi|330255495|gb|AEC10589.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana] Length = 723 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 105/324 (32%), Gaps = 43/324 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K G KV++ Sbjct: 419 FLTHFHLDHYQGLT--KSFSHGKIYCSLVTAKLVNMKI----GIPWERLQVLDLGQKVNI 472 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + NH P ++ ++ + ++HTGD++ ++ + Sbjct: 473 SGIDVTCFDANH-CPGSIMILFEPANGKAVLHTGDFRYSEEMSNW----------LIGSH 521 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I +L+ D+T + E I+ + I A K L+ +++ R+ + Sbjct: 522 ISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVAR 581 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + +++ + +++ D + E+ + P Sbjct: 582 VLR------------EKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVV-----PL 624 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 LA R + + + ++I + G + V Sbjct: 625 WTLASFKRLKHVANRYTNRYSLIVAFSPT-GWTSGKTK---KKSPGRRLQQGTIIRYEVP 680 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVA 390 S H +LK Q + P+V++ Sbjct: 681 YSEHSSFTELKEFVQKVSPEVIIP 704 >gi|289626928|ref|ZP_06459882.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 474 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 83/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + + S+ ++IDCG S + G D + Sbjct: 6 GAVDTVTGSCHQLCMDASSN---LLIDCG-SVQERGERAASFGFD------------PET 49 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 50 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 109 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 110 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 169 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 170 FSGDLGASHTPFLP--------APKPPERANVLILESTYGDRLHEDRSIRQQALEQIIDK 221 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 222 ALEDNGTVLIPAFS--IGRTQELLYELED 248 >gi|224367586|ref|YP_002601749.1| hypothetical protein HRM2_04710 [Desulfobacterium autotrophicum HRM2] gi|223690302|gb|ACN13585.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 238 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 15/146 (10%) Query: 35 IMIDCGVSFPK-DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I++D G+S + + G + P ++L A+ +TH H DH A L ++ Sbjct: 8 ILVDAGLSGVELERRMGSRNLLP---------EDLSAVVVTHEHTDHIQAAGVLSRRYNL 58 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 P+Y + K + F+ G + I ++H + + + + Sbjct: 59 PIYINSKTYAAAAKKL-----GRVDRITLFECGSAFHINDLEITPFSISHDAVDPLGMTV 113 Query: 154 RSPVGNIVHTGDWKLDDDAILGDVTD 179 + D + + + D Sbjct: 114 EFDRVKLGIATDLGIATHLVKQHLHD 139 >gi|167837129|ref|ZP_02464012.1| metallo-beta-lactamase family protein [Burkholderia thailandensis MSMB43] Length = 258 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMK 63 + F LG E N + + ++ +++DCG S + + L VDL Sbjct: 1 MRFASLGSGSE--GNALVVEASNGATTTRVLLDCGFSAKELERRLARVDL---------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 +L AI +TH H DH G L +P+Y S + A + Sbjct: 49 RVDDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA------DEADVDLRVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + VG + V H E + V + D + Sbjct: 103 WGDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|299140860|ref|ZP_07033998.1| VicX protein [Prevotella oris C735] gi|298577826|gb|EFI49694.1| VicX protein [Prevotella oris C735] Length = 267 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 14/162 (8%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F+ G G G N Y + ++ID GV G+ + Sbjct: 2 LKFISFG-SGSSG-NC----YYLYTETDGLIIDAGV--------GIRTLKKHFKNYGLHL 47 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N+ + ITH H DH ++ L + VY + +E ++ + + Sbjct: 48 DNVHHMLITHDHADHVKSVGSLSKDYGLDVYTTHSVHVGIEHNYFVKKKIEPTHVKIVEK 107 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 G +G F + V H + + + V D Sbjct: 108 GVTFKLGEFKVTPFGVPHDSSDNVGYKVCYGDVVFVLMTDIG 149 >gi|240102275|ref|YP_002958583.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] gi|239909828|gb|ACS32719.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] Length = 255 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 17/187 (9%) Query: 56 PDITF-IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRV-- 110 PD+ + + + K + + ITH H DH L +L F + Y+ A+ + + A+ Sbjct: 51 PDLHYHLERLNKRVERVLITHGHFDHIFGLPELQVFKRLKFYSHREALEVAKSLARLAFG 110 Query: 111 -YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + ++ VG + V H++ VI I TGD Sbjct: 111 SESPEGHEWSYNKLEFWEETRVGKMKVVHFPVTHTVT-AGGFVIEVGGKRIAITGDTGP- 168 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + EG L+ + T+ RE S G+++ I + G + Sbjct: 169 EILKDERAIKL-------MEGADLLIAEMTH--REAIPGSHLGVREAIELAKRVGAGYTV 219 Query: 230 VTTFSSS 236 S S Sbjct: 220 FAHISHS 226 >gi|167563317|ref|ZP_02356233.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis EO147] gi|167570489|ref|ZP_02363363.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis C6786] Length = 258 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + + ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALVVEASNGATTTRVLLDCGFSAKELER--------RLARLDLRV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI +TH H DH G L +P+Y S + A + + Sbjct: 51 DELDAILVTHEHGDHVGCALTLARRASLPLYMSWGTARAVGA------DDADVDLHVLWS 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 GD+ +G + V H E + V + D + Sbjct: 105 GDEAALGDLCVLPYTVPHDAREPLQFVFSDGAARLGVLTDVGM 147 >gi|326911096|ref|XP_003201898.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Meleagris gallopavo] Length = 714 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 99/349 (28%), Gaps = 61/349 (17%) Query: 69 MAIFITHAHEDHYGAL--HDLWSF----LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V +Y SP LL YE I + Sbjct: 27 RAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNSKYEFWENHIVALE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD+ Sbjct: 87 VETPTQISLVDETTGEKEDIEVTLLPAGH-CPGSVMFLFQGENGTVLYTGDF-------- 137 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 L ++ + K I+ D + + Sbjct: 138 -------RLAK----------GEAARMELLHSGTRVKDIQSVYLDTTFCDPRFYHIPSRE 180 Query: 235 SSVSRIRSII-DIAEQIGRKIVLLG-SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 ++ I ++ +V L + + I++ ++ ++ E Sbjct: 181 ECLNGILELVRSWTSLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNRLDMFKNMPE 240 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV----------IFSSRAIPGNEVAI 342 L I T + + R +L T I S G + Sbjct: 241 ILYHITTDRYTQIHACRHPKDDDYFRGNRLPCGITCQNGTPLHVISIKPSTMWFGERIKK 300 Query: 343 GHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 ++ V ++ S H +++K +I P + Sbjct: 301 TNVI---------VRTGESTYRACFSFHSSYSEIKDFLSYICPVNVYPN 340 >gi|257483919|ref|ZP_05637960.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331013150|gb|EGH93206.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 252 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 59/180 (32%), Gaps = 24/180 (13%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ANQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G+ + VGA I+ V V H E V D +L D+L Sbjct: 98 GGESLQVGALGIDVVSVAHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQHYQGLDALM 157 >gi|6831520|sp|Q56686|CPDP_VIBFI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase; Short=3':5'-CNP; Short=PDEase; Flags: Precursor gi|388363|gb|AAA27513.1| cpdP [Aliivibrio fischeri] Length = 330 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 41/223 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK---DDLPGV--DLVFPDIT------F 60 GG+ + N+ + S + ++M+D G + G D+ PD + + Sbjct: 34 GGIQD--GNLTAFLIKSEADSNFVMLDAGSVVNGLIVSEQKGAFKDITVPDSSPYTKVGY 91 Query: 61 IMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFA-IGLLEAKRV----- 110 ++ + + FI+HAH DH L D P+Y L++ Sbjct: 92 LL--KDRIKGYFISHAHLDHVAGLIISSPDDSKK---PIYGLAATNKDLMKNYFNWSAWP 146 Query: 111 ------YERVSKKIPCISFQA--GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV- 161 K + Q V S+ S+ ++HS ++ +++ G++ Sbjct: 147 NFGNKGEGFKLNKYNYVDLQPGVWSPVAETTMSVVSLPLSHSGGQSTVFILKDSEGDVFA 206 Query: 162 HTGDWKLDD----DAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + GD D+ A+ + G + + TN Sbjct: 207 YFGDTGPDEVEKSSAMRTAWSVLAPFVKQGKLKGIIIEVSFTN 249 >gi|308182969|ref|YP_003927096.1| hypothetical protein HPPC_04100 [Helicobacter pylori PeCan4] gi|308065154|gb|ADO07046.1| hypothetical protein HPPC_04100 [Helicobacter pylori PeCan4] Length = 205 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 50 GVDLVF-PDIT---FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGL 104 G+D + P + ++++ KN AI ITH H DH L L P+YA + + Sbjct: 23 GIDFIIDPGFSSSEWVLENAKNPKAILITHGHYDHVWDSIQLSKTLKDTPIYAPKDDVFM 82 Query: 105 LEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 LE+ + + + +++ +I+ P + I ++ Sbjct: 83 LESDIFHLGMPVFSPTFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VI 138 Query: 162 HTGDWKLDDD--AILGDVTDKDSLCA 185 +GD+ +++ + Sbjct: 139 FSGDFIFYRSIGRYDFPYSNEKDMKE 164 >gi|218883420|ref|YP_002427802.1| RNA procession exonuclease-like protein [Desulfurococcus kamchatkensis 1221n] gi|218765036|gb|ACL10435.1| exonuclease of the beta-lactamase fold involved in RNA processing-like protein [Desulfurococcus kamchatkensis 1221n] Length = 362 Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 83/240 (34%), Gaps = 18/240 (7%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS---KKIPCISFQAGDK 128 ITHAH DH G L + + + + A+ + L+E+ ++ ++ + Sbjct: 40 VITHAHVDHLGGLEESIKYSKM-IIATSITLDLIESLNYVDKYLLPYYRLKKKPLNYKEC 98 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + + + IP + + + +TGD+KLD + Sbjct: 99 LVIDDNETLCLFQASHIPGAAQVYVEYRELRLGYTGDFKLDGKTQVM------------- 145 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + + L+ +ST + G+ + +++ +++ + I Sbjct: 146 KDLDVLVMESTYGNPNYRRPFKDGVPELFASLVEEGLYRYKRVYVYGYHGKVQEAMIILR 205 Query: 249 QIGRKIVLLGSS-LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRS 307 + G + + S + V GI + + D GL P E+ ++ + E R Sbjct: 206 EKGIEAPFILPSKIYHSTRVLEKYGIKIGNYMHEEDMLRGLNPGEKAVIFKHMNVAEYRR 265 >gi|314933717|ref|ZP_07841082.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] gi|313653867|gb|EFS17624.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] Length = 207 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 22/178 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + D + + + K AI +THAH DH GAL Sbjct: 16 YFIENEESVILID-----PSSES---DKII---KKLNQINKPFKAILLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPC--ISFQAGDKVDVGAFSI 136 D+ S VPVY L+ K + + I S ++ Sbjct: 65 DIISKYDVPVYMHQEEFDFLQDPVKNGASKFKQYGMPQVISYAKPSKLEEGSKEIEGLKF 124 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + + P ++ V + + D ++L + I L Sbjct: 125 DVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKIFEL 180 >gi|170758548|ref|YP_001786487.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169405537|gb|ACA53948.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 502 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-TYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPLLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|224026015|ref|ZP_03644381.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] gi|224019251|gb|EEF77249.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] Length = 220 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 74/219 (33%), Gaps = 32/219 (14%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGAL 84 + I+IDCG PD M + + A+ ITH H DH G L Sbjct: 2 VEVNGVRILIDCG---------------PDFREQMIRMDDYRPIDAVLITHEHYDHVGGL 46 Query: 85 HDLWSFL---HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVR 140 DL F +PVYA + L+A+ Y P + ++ G F++ Sbjct: 47 DDLRPFCRFGDIPVYAEAYTADRLQARIPYCFTENLYPGVPHIPLHVIEAGKPFTVS-NS 105 Query: 141 VNHSIPETMALVIRSPVGNIVH-TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 HS+ V+ + + + G+ D + L + C Sbjct: 106 YGHSVEILPFRVMHGKLPIMGYRIGEMAWITDMLTMPAASYACLKNLD--------CLVI 157 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 NA+R+ + + +++ + I + S + Sbjct: 158 NALRQEQHPTHQTVREALAQISCIQPEEAFLIHASHQIG 196 >gi|269123219|ref|YP_003305796.1| beta-lactamase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314545|gb|ACZ00919.1| beta-lactamase domain protein [Streptobacillus moniliformis DSM 12112] Length = 252 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 16/180 (8%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G +++D G S + + I + +++ A+FITH H Sbjct: 12 GNSTFVEVGGVK----LLVDIGFS--------LKKTIEKLESINERLEDIYAVFITHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH +L L ++ VY + ++++K I F +V + + + Sbjct: 60 DHVKSLGPLLRKTNILVYIHEDSYNMIKSKL----GKYDEERIIFLNKREVYIKNACVIN 115 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + H + V+ D A+ + D + N LM S Sbjct: 116 FDLTHDSEHCLGFSFIENNKKFVYITDAGYVTKAMELQCQNADVIAIESNYDYDLLMSGS 175 >gi|223934878|ref|ZP_03626797.1| beta-lactamase domain protein [bacterium Ellin514] gi|223896331|gb|EEF62773.1| beta-lactamase domain protein [bacterium Ellin514] Length = 283 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + W+++D G+ + + D F AI +TH H D Sbjct: 27 NTYMV---ANRDGSWVLVDAGLFYSTAKILRA----ADHWF---RGTKPSAIVLTHGHFD 76 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP--------CISFQAGDKVDV 131 H GAL L + PVYA + L K + + +D+ Sbjct: 77 HRGALKKLAAHWDAPVYAHEEEMPFLTGK--EDYPAPDPTAGGGLMTLMSWMFPRRAIDI 134 Query: 132 GAFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKL 168 ++ + N S+P I +P H + Sbjct: 135 SG-RVQPLPANGSVPGMKEWRWIHTPGHTRGHVSFFHD 171 >gi|71735253|ref|YP_275801.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555806|gb|AAZ35017.1| metallo-beta-lactamase family, beta-CASP subfamily [Pseudomonas syringae pv. phaseolicola 1448A] Length = 478 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 82/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + S+ ++IDCG S + G D + Sbjct: 10 GAVDTVTGSCHQLCMDVSSN---LLIDCG-SVQERGERAASFGFD------------PET 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 54 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 113 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 114 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRLV 173 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 174 FSGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALEQIIDK 225 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 226 ALEDNGTVLIPAFS--IGRTQELLYELED 252 >gi|330897212|gb|EGH28631.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 477 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 80/270 (29%), Gaps = 57/270 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDDLPGVDLVFPDITFIMKERK 66 G V + + SS ++IDCG ++ G D + Sbjct: 10 GAVDTVTGSCHQLHIDVSSS---LLIDCGSVQERGRPSENASFGFD------------PE 54 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIP 119 + A+ I+H H DH G + +L + P+ S + LL K + ++ Sbjct: 55 AIRALLISHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDLLKIEFAHDPGQVA 114 Query: 120 CISFQAGDKVDVGAFSIES--------------VRVNH-----SIPETMALVIRSPVGNI 160 ++ F R H I + + + Sbjct: 115 RYLDVINKRIIALPFDDWFSLIDNESVHCRVRLQRAGHILGSAYIECDLQYPAQGRSVRV 174 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 V +GD L E L+ +ST R + + + + I D Sbjct: 175 VFSGDLGASHTPFLP--------APKPPERADVLVLESTYGNRVHEDRNIRQLGLERIID 226 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 227 KALEDNGTVLIPAFS--IGRTQELLYELED 254 >gi|237746599|ref|ZP_04577079.1| hydroxyacylglutathione hydrolase [Oxalobacter formigenes HOxBLS] gi|229377950|gb|EEO28041.1| hydroxyacylglutathione hydrolase [Oxalobacter formigenes HOxBLS] Length = 265 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 22/44 (50%) Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP 99 P ++ + K L AI +TH HEDH G + L VPVY Sbjct: 41 PVLSTLKKRSLKLSAILLTHRHEDHIGGVARLLQEADVPVYGPR 84 >gi|167762359|ref|ZP_02434486.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] gi|167700002|gb|EDS16581.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] Length = 254 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHD 86 + I+IDCG PD M + + + ITH H DH G L D Sbjct: 42 TDDAVILIDCG---------------PDFRTQMLRASVYERIDGVLITHEHYDHVGGLDD 86 Query: 87 LWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSI 136 L F +PVY+ + L A+ Y V KK P + +V+ G F + Sbjct: 87 LRPFCRFSEIPVYSDAYTAAHLRARMPYCFVDKKYPGVPRIYLQEVEAGRPFYV 140 >gi|23099371|ref|NP_692837.1| hypothetical protein OB1916 [Oceanobacillus iheyensis HTE831] gi|22777600|dbj|BAC13872.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 207 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 23/182 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G+ I++D G +L ++ I + ++ AI +THAH D Sbjct: 14 NCYILKKGTNG----IIVDPG---GDAELI--------LSIIKEHHLDINAILLTHAHFD 58 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA-------KRVYERVSKKIPCISFQAGDKVDVG 132 H GAL + + PVY L K + E + S + +G Sbjct: 59 HIGALEKIRQKTNAPVYLHQAEHEWLSDPNLNGSHKLIGESILATPADFSVDE-GGLTIG 117 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 FS++ P +++ + I ++ D L E + Sbjct: 118 EFSMQVYHTPGHSPGSVSYIFPDQKIVISGDVLFQRGIGRTDLPGGDLAILEHSIREKLY 177 Query: 193 AL 194 L Sbjct: 178 QL 179 >gi|67473862|ref|XP_652680.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56469553|gb|EAL47293.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 396 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 99/330 (30%), Gaps = 44/330 (13%) Query: 67 NLMA---IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV-YERVSKKIPCIS 122 + ++H H DHY L W + + + + L+ K IP + Sbjct: 38 QIKGYKYFLLSHFHSDHYLGLSSRWK-CGI-IIGTEITLNLVRYKFKVENEYLYVIPLNT 95 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRS--PVGNIVHTGDWKLDDDAILGDVTDK 180 + + + + ++ H P + VI+ +H GD++ D + Sbjct: 96 PTYFEGSNNDGYIVTAIEAGH-APGSCCFVIKRISDGIIYLHVGDFRFDSTLQNDKNWKE 154 Query: 181 DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI 240 I L D+T + + I I+K + G L + ++ + Sbjct: 155 YVFTQH----INTLFLDTTYCDPQYKFKERQIICNEAVKIVKQSMGKTLFIVQTYTIGKE 210 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 + +IA Q G KI + + V D+ + ++ L + + + Sbjct: 211 MFVEEIARQTGIKIHVDENKYSIVKLCKRDLSLYTLEESSLEIRTSTSNSSITSLTVE-- 268 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 L+QL R + + + E Sbjct: 269 --------LSQLPNKYDRIIIFQPTGW---------------------AKKTTCKGSFEV 299 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 E + S H N+L Y+ I ++ Sbjct: 300 KEYKMPYSEHSSFNELIDCYKMIHADHVIP 329 >gi|257125889|ref|YP_003164003.1| beta-lactamase [Leptotrichia buccalis C-1013-b] gi|257049828|gb|ACV39012.1| beta-lactamase domain protein [Leptotrichia buccalis C-1013-b] Length = 257 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 12/144 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 K +ID G S + + I K +++ IF+TH H DH L + Sbjct: 17 IEMGNKKFLIDAGFS--------GKKIVEKLNNIGKRIEDIKGIFVTHEHSDHIQGLGVI 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +P+Y + + ++F DK+ + I + V H + Sbjct: 69 SRKYDIPIYLHEVTYNV----IKDKIGKIDKKNLNFIRNDKIKIENCVINNFEVMHDAKK 124 Query: 148 TMALVIRSPVGNIVHTGDWKLDDD 171 + + + D ++ Sbjct: 125 CLGYTFEYEGKKLSYASDVGCVNN 148 >gi|221198398|ref|ZP_03571444.1| beta-lactamase domain protein [Burkholderia multivorans CGD2M] gi|221208925|ref|ZP_03581922.1| beta-lactamase domain protein [Burkholderia multivorans CGD2] gi|221171208|gb|EEE03658.1| beta-lactamase domain protein [Burkholderia multivorans CGD2] gi|221182330|gb|EEE14731.1| beta-lactamase domain protein [Burkholderia multivorans CGD2M] Length = 258 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 18/164 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 + F LG E N + S ++ +++DCG S + + G + Sbjct: 1 MRFASLGSGSE--GNALVVEATSGTTTTRVLLDCGFSAKEVERRLG---------RLNLC 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +L AI +TH H DH G+ L +P+Y S A + Sbjct: 50 VDDLDAILVTHEHSDHVGSALTLARRASLPLYMSWGTARAAGA------DEADVDLRVLW 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 104 GDETAAIGDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|116621949|ref|YP_824105.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225111|gb|ABJ83820.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 469 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 65/455 (14%), Positives = 128/455 (28%), Gaps = 69/455 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G G + +M L G K ++DCG++ + D ++ F ++ A+ Sbjct: 7 GAAGTVTGSMHLVETG----GKRYLLDCGLAQGRRKE--ADAKNRNLPF---SGSSIDAV 57 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFA------------------IGLLEAKRVYE 112 ++HAH DH G L L P+Y++P + L + Sbjct: 58 VLSHAHIDHSGNLPSLVKHGFSGPIYSTPASNDLCGWMLRDTAHIQEKDAEFLNKRLEKR 117 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT--GDWKLDD 170 + + D DV V + P ++ + + H + Sbjct: 118 HAAGLPNGVVEPLYDTADVERTLPLFAPVPYHTPLAISDHLSYESYDAGHILGSSCVILH 177 Query: 171 DAILGDVTDKDSLCAIGNEGI------------LALMCDSTNAMREGTCISEKGIKKNIY 218 D +G G+ L+ +ST R S I K Sbjct: 178 DTAGSVPVRLAFSGDVGRPGLPIIRDPEVMPPADYLIMESTYGGRLHKQ-SGHVINKLAD 236 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLKRVVSVAIDV 271 + + AK + + +V R + ++ + Q+ I + V +V Sbjct: 237 VVTRTAKRGGRIIVPAFAVGRTQQLVLLLHQLFNEKRIPNIPIFVDSPLALNVTAVHRAH 296 Query: 272 GIIKKDQLFLSDESFGL-YPREQLIVIATGSQGEPRSALA------------QLSRGEMR 318 + + +L I S+ + + L + R Sbjct: 297 PECFDEDTRRYLTDGEDPFGFRRLQYIREASESKKLNDLHGPFVVVSSSGMCEAGRILHH 356 Query: 319 NVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH----VSGHPYPN 374 E + + + E + + +SGH N Sbjct: 357 LRNNIEDPRNTILITGFQAQDTLGRKLVEKWPEVKIFGEPMRVRAEISSLDELSGHADQN 416 Query: 375 DLKRMYQWIRP--QVLVAIHGEPLHLVAHKELALQ 407 +L + + P + + +HGE +L Sbjct: 417 ELLEWIRPMVPALRKVFLVHGEAQQSQTLAKLLHD 451 >gi|325570536|ref|ZP_08146262.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325156382|gb|EGC68562.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 206 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 51/170 (30%), Gaps = 34/170 (20%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + L G V E N L ++ID G + I I K Sbjct: 1 MKIIGLVTGPVQE---NCYLI----WKEDVLLIIDPG---AEAARL--------IAEIEK 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI-- 121 AI +TH H DH GA+ L + +PVY SP + Sbjct: 43 TGAKPAAILLTHTHYDHIGAVDHLRDYYQIPVYVSPL----------EQGWLSDPMKNLS 92 Query: 122 -SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + E + I V+ +P +I + + D+ Sbjct: 93 GRHPELGTITARPAEFELELKEYEIAGMSFKVVATPGHSIG-SVSFIFDN 141 >gi|114563984|ref|YP_751498.1| beta-lactamase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335277|gb|ABI72659.1| beta-lactamase domain protein [Shewanella frigidimarina NCIMB 400] Length = 521 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHV 93 +IDCG+ F + G D I + +++ A+ ITH H DH G + L + + Sbjct: 40 YLIDCGL-FQGAETAG--KSSADQLQITFDIQHIKALIITHCHIDHVGRIPYLLAAGFNQ 96 Query: 94 PVYASPFAIGLL 105 P+YA+ LL Sbjct: 97 PIYATTATAALL 108 >gi|294673338|ref|YP_003573954.1| phnP protein [Prevotella ruminicola 23] gi|294473995|gb|ADE83384.1| putative phnP protein [Prevotella ruminicola 23] Length = 253 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 44/246 (17%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + I ITH+H DH G + Sbjct: 40 VETDNTRILIDCG---------------PDFRAQILPQPFRKIDGILITHSHYDHMGGMD 84 Query: 86 DLWSFLH---VPVYASPFA----IGLLEAKRVYERVS--KKIPCISFQAGDKVDVGAFSI 136 D+ + + VYA+ A + +L R I + + +G + Sbjct: 85 DIRPYCQFGAINVYANKLAKQSMLEMLPYCFAENRYPGVPAIGLHEIEPHVPLQIGNLEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 ++V H ++ +G + + D K DD L + EG L+ Sbjct: 145 LPIQVMH----GKLPILGYKIGKLTYITDMKTIDDGELTYL-----------EGTELLVV 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 ++ + S + + I K L+ V + ++ G + Sbjct: 190 NALRFDKPHH--SHQLMDDAIAFARKVGAKQTLIIHVCHDVG-LHEEVNKLLPEGIDLAY 246 Query: 257 LGSSLK 262 G + Sbjct: 247 DGQEIY 252 >gi|307719349|ref|YP_003874881.1| hypothetical protein STHERM_c16700 [Spirochaeta thermophila DSM 6192] gi|306533074|gb|ADN02608.1| hypothetical protein STHERM_c16700 [Spirochaeta thermophila DSM 6192] Length = 393 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 29/161 (18%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 Y Y S + K ++ID P D P + + ++ A+ TH H DH Sbjct: 180 TNAYVYVSQVTGKALLID-----PGADAPRI------VDWLEDLGILPSALLCTHGHIDH 228 Query: 81 YGALHDLWSFLH----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQA----------- 125 GA+ L LH +PV+ + LLE +R I Sbjct: 229 VGAIGHLLDRLHHDRTIPVFLHEADLPLLEEAFDLQRAWLHSAGIPTADLDRPPVSSIRP 288 Query: 126 -GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 D ++ + + + P + + + +P ++ +GD Sbjct: 289 LTDGKELDPWGLRLLHTPGHSPGS--ICLYAPEEGVLFSGD 327 >gi|265751142|ref|ZP_06087205.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] gi|263238038|gb|EEZ23488.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] Length = 258 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 79/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I G +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGKMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHNTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHMG 234 >gi|237794390|ref|YP_002861942.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|229261339|gb|ACQ52372.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 502 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 14/130 (10%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F LG + + L K I++DCG ++ D G D + +F Sbjct: 1 MEIKF--LGAASCVTGSCHLL----KIKDKNILLDCG-AYQGKDDEG-DR---NFSFKFD 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + + ++HAH DH G + L+ V ++ L + + Sbjct: 50 IKD-IDCVILSHAHIDHSGRIPLLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-VE 107 Query: 123 FQAGDKVDVG 132 ++ ++ G Sbjct: 108 WKNRKRIRSG 117 >gi|71896183|ref|NP_001026765.1| protein artemis [Gallus gallus] gi|71153324|sp|Q5QJC2|DCR1C_CHICK RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair 1C protein; AltName: Full=SNM1 homolog C; Short=chSNM1C; AltName: Full=SNM1-like protein gi|47835016|gb|AAR27406.1| artemis [Gallus gallus] Length = 714 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 102/361 (28%), Gaps = 66/361 (18%) Query: 57 DITFIMKERKNLMAIFITHAHEDHYGAL--HDLWSF----LHVPVYASPFAIGLLEAKRV 110 D + A F++H H+DH L L L V +Y SP LL Sbjct: 20 DYDNLRAR-----AYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNSK 74 Query: 111 YERVSKKIPCISFQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 Y I + + ++ + + + H P ++ + + G +++ Sbjct: 75 YAFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGH-CPGSVMFLFQGENGTVLY 133 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK 222 TGD+ L ++ + S K I+ D Sbjct: 134 TGDF---------------RLAK----------GEAARMELLHSGTSVKDIQSVYLDTTF 168 Query: 223 NAKGCVLVTTFSSSVSRIRSII-DIAEQIGRKIVLLG-SSLKRVVSVAIDVGIIKKDQLF 280 + + +S I ++ +V L + + I++ ++ Sbjct: 169 CDPRFYHIPSREECLSGILELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVH 228 Query: 281 LSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV----------IF 330 ++ E L I T + + +R +L T I Sbjct: 229 VNKLDMFKNMPEILYHITTDRYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISIK 288 Query: 331 SSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 S G + ++ V ++ S H +++ +IRP + Sbjct: 289 PSTMWFGERIKKTNVI---------VRTGESTYRACFSFHSSYSEIMDFLSYIRPVNVYP 339 Query: 391 I 391 Sbjct: 340 N 340 >gi|196231624|ref|ZP_03130482.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428] gi|196224477|gb|EDY18989.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428] Length = 894 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 108/323 (33%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++HAH DH + AS L++A+ ER + G Sbjct: 29 FVSHAHADHIARHPEF--------IASAGTARLMQARLGGER-----QGHILEFGQPASF 75 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 F I + H I + +I S G++++TGD+KL + + T+ Sbjct: 76 RDFQITLLPAGH-IFGSAQSLIESEHGSLLYTGDFKL-RRGLSAEPTEW--------RHA 125 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRIRSIIDIAEQI 250 L+ ++T + + + + + + + + + S+ + + I+ + Sbjct: 126 ETLIMETTYGLPKYRLPPTEAVMARMVAFCQESLEDGAVPVLLGYSLGKAQEILCAILKA 185 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 G +L G ++ ++ + + D E + E ++I S L Sbjct: 186 GLTPMLHG-AVYQMTEIYRQLKPDFPDG----YERYSAGKVEGKVLICPPSANRTI-MLT 239 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 ++ + + ++ G + + +S H Sbjct: 240 RIKN-------------------------RRVAVLTGWALDPGATYRYQC-DAAFPLSDH 273 Query: 371 PYPNDLKRMYQWIRPQVLVAIHG 393 DL R ++P+ ++ +HG Sbjct: 274 ADYTDLVRYVDLVQPKRVLTLHG 296 >gi|313202861|ref|YP_004041518.1| RNA-metabolising metallO-beta-lactamase [Paludibacter propionicigenes WB4] gi|312442177|gb|ADQ78533.1| RNA-metabolising metallo-beta-lactamase [Paludibacter propionicigenes WB4] Length = 467 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 62/494 (12%), Positives = 152/494 (30%), Gaps = 104/494 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F+ G E+ + L + + K I++DCG F D + ++ F Sbjct: 1 MKIKFI--GAAREVTGSKHLI---TTNEGKRILLDCG-MFQGKG-LETDSMNRNLMF--- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK----- 117 + ++ + ++HAH DH G + +++ V + L ++ Sbjct: 51 DPASIDYLILSHAHIDHSGLIPYMYNLGFRGSVVCTNATRDLCAIMLADSGHIQELDNKW 110 Query: 118 ----------------IPCISFQAGDKVDVG-----------AFSIESVRVNHSIPETMA 150 I + ++ +G +++ H + + Sbjct: 111 FNKKRDKQGLPPVEPIYNQIDSEKCMELFIGVAYDRRFQINDKINVKFTNSGH-MLGSAV 169 Query: 151 LVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG- 205 + + ++ +TGD + I+ T L+ +ST R Sbjct: 170 VNLELLENGKKVHLAYTGDIGRPHNRIIHPPT--------AFPQCDYLITESTYGNRLHA 221 Query: 206 -TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ-IGRKIVLLGSSLKR 263 SE+ + K + + + +G +++ +FS + R + I+ + + ++ + Sbjct: 222 EEKESEEDLLKIVRETCVDNRGKLIIPSFS--IGRTQEIVFVLNNLYNKGLLP------K 273 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKL 322 + + +F ++ V+ T ++L + E + + Sbjct: 274 IEVFVDSPLSVNATDVFRMHTECMNVDVKE--VLKTDDDPFGFNSLHYIKNVDESKALND 331 Query: 323 AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH---------------- 366 + +I SS + H+ N + ++ P Sbjct: 332 YNEPCIIISSSGMLEAGRIKHHVANNISNWRNTILMVGYCSPTSLGARIQEPGLRFISIF 391 Query: 367 ---------------VSGHPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQE 408 SGH N++K P + +HGE +++ + + Sbjct: 392 GEMHEINARIARIEAFSGHGDYNEMKSFLSCQNPVEIKKTFLVHGEYKVQLSYADELKKA 451 Query: 409 GIACVPPVRNGKML 422 G + G+ Sbjct: 452 GFHDIEIPEAGQEF 465 >gi|331701034|ref|YP_004397993.1| beta-lactamase domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329128377|gb|AEB72930.1| beta-lactamase domain protein [Lactobacillus buchneri NRRL B-30929] Length = 246 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 63/199 (31%), Gaps = 35/199 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y S ++IDCG L ++ V + L A+ ++H H DH Sbjct: 21 SYLLESGDFKLLIDCGSG----ALLSLEQVV---DPL-----KLNAVILSHYHHDHTADV 68 Query: 82 GALHDLWSFLH-------VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L W +P+Y + E K I++ + VG F Sbjct: 69 GVLQYYWQLHEKRYSEPVLPIYGH--TLD--EINFKGLSWPKSTKGIAYDPSQTLTVGPF 124 Query: 135 SIESVRVNHSIPETMALVIRS--PVGNIVHTGDWKLDD------DAILGDVTDKDSLCAI 186 +I + +H +P A+ I+ +V T D +TD + Sbjct: 125 TITFFKTHHPVP-AFAMRIQESSTGKVLVFTADTAYFPELTQFVHDADLLMTDTNFFATK 183 Query: 187 GNEGILALMCDSTNAMREG 205 + +S +G Sbjct: 184 TGQKWHMTSTESGQLAHDG 202 >gi|325279424|ref|YP_004251966.1| beta-lactamase domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311233|gb|ADY31786.1| beta-lactamase domain protein [Odoribacter splanchnicus DSM 20712] Length = 263 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 37/218 (16%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 K I+ID G PD + + + K+L AI +TH H+DH G L D Sbjct: 41 DIKGKKIIIDAG---------------PDFRYQMLRSQVKDLRAILLTHGHKDHIGGLDD 85 Query: 87 L-----WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 + V VY + ++ Y + + P + +D F I+ Sbjct: 86 VRAFNWVKQGAVDVYGNEGTREVVYKDFSYAFAAFRYPGVPEINYHVIDDRPFYID---- 141 Query: 142 NHSIPETMALVIRSPVGNIVH-TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 I V+ + + G++ DA + + L +G+ L+ N Sbjct: 142 --DIQVVPIPVLHYKMPVLGFRIGNFAYITDAKTIPASSMERL-----KGVEYLVI---N 191 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 A+R+ +S +++ + I + +T + Sbjct: 192 ALRKELHMSHFNLEEALTMIARIQPKSAFLTHIGHQMG 229 >gi|289649429|ref|ZP_06480772.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 476 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 83/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + + S+ ++IDCG S + G D + Sbjct: 8 GAVDTVTGSCHQLCMDASSN---LLIDCG-SVQERGERAASFGFD------------PET 51 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 52 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 111 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 112 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 171 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 172 FSGDLGASHTPFLP--------APKPPERANVLILESTYGDRLHEDRSIRQQALEQIIDK 223 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 224 ALEDNGTVLIPAFS--IGRTQELLYELED 250 >gi|326202270|ref|ZP_08192139.1| beta-lactamase domain protein [Clostridium papyrosolvens DSM 2782] gi|325987388|gb|EGD48215.1| beta-lactamase domain protein [Clostridium papyrosolvens DSM 2782] Length = 263 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 11/138 (7%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + + ++ID G+S + + I + L AI I+H H DH L Sbjct: 20 TEKTKLLIDAGLS--------GKRILEALCSIGESPAELSAILISHEHSDHVRGAGILSR 71 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +P+YA+ +E ++ K+ + G + ++G + + H E + Sbjct: 72 KADIPIYANESTWCAMETGLGPVKLENKVAFCT---GQQFEIGDICVRPFSIPHDAAEPV 128 Query: 150 ALVIRSPVGNIVHTGDWK 167 + I D Sbjct: 129 GFNFFAEGKRITTATDIG 146 >gi|119872485|ref|YP_930492.1| putative mRNA 3-end processing factor [Pyrobaculum islandicum DSM 4184] gi|119673893|gb|ABL88149.1| putative mRNA 3-end processing factor [Pyrobaculum islandicum DSM 4184] Length = 314 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 62/180 (34%), Gaps = 18/180 (10%) Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 ++++ + +TH H DH + L V A+ + + S I+ Sbjct: 27 KRDVDFVLVTHGHSDHIS--RYVLRQL---VVATQETFVAMYIRL----GSLPTRRITVA 77 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 G +++ I + H I ++ ++ ++ TGD+ + TD Sbjct: 78 PGKFLELDGVHIAVLEAGH-ILGSVMYLVEIDDLQVLFTGDFNTTGTIL----TD----A 128 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSII 244 A + L+ D+T + + + D+++ V + + + + + Sbjct: 129 AEPVDKPDILVMDATYGDPAYIFPNRAEVYNELLDVVERYTTSGKVAIVAYPLGKAQEVA 188 >gi|323698361|ref|ZP_08110273.1| beta-lactamase-like protein [Desulfovibrio sp. ND132] gi|323458293|gb|EGB14158.1| beta-lactamase-like protein [Desulfovibrio desulfuricans ND132] Length = 293 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 65/212 (30%), Gaps = 44/212 (20%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA--IFITH 75 G N +++D G + G +LV + A +FITH Sbjct: 23 GGNTTCIE-VRADDGNLLILDAGTGIRE---LGRELV----------QDGPAACDVFITH 68 Query: 76 AHEDHYGALHDLWSFL----HV-------PVYASPFAIGLLEAK------RVYERVSKKI 118 H DH L V P+ + L ++ I Sbjct: 69 THWDHISGLPFFLPLFVPGSRVTLHGPADPLNMTGIEAALARQMEYPFFPVRTAELAADI 128 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 + G+ VD+G + + +NH P ++R + TGD + + Sbjct: 129 GYRTLAEGETVDLGFAEVTPLLMNHPSPN-FGYLVRCDGRTLFFTGDHEPFGNIYAPGDE 187 Query: 179 DKDSLCAIGNE----------GILALMCDSTN 200 D ++ A+ E G+ L+ D+ Sbjct: 188 DYEAYEALVAERNHIVLDQLRGVDLLVIDAQY 219 >gi|239817960|ref|YP_002946870.1| beta-lactamase domain protein [Variovorax paradoxus S110] gi|239804537|gb|ACS21604.1| beta-lactamase domain protein [Variovorax paradoxus S110] Length = 350 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 12/148 (8%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV---SKKIPCISF 123 + + +TH H DHYG L V S + E + + + IS Sbjct: 155 QIKYVIVTHGHGDHYGGASYLAQKYRARVVMSEADWTMTETRLEFATPIWGAPPKRDISV 214 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVI--------RSPVGNIVHTGDWKLDDDAILG 175 + GD++ +G S+ T++ V + ++ D + Sbjct: 215 KDGDRITLGDTSVTLYLTPGHTMGTISPVFDVSAGGRKHRAMLWGGTGFNFGKDVPRLDA 274 Query: 176 DVTDKDSLCAIGNEG-ILALMCDSTNAM 202 + + AI I ++ + +N Sbjct: 275 YIGATQRMGAIAQSQRIDVMLSNHSNID 302 >gi|187778240|ref|ZP_02994713.1| hypothetical protein CLOSPO_01832 [Clostridium sporogenes ATCC 15579] gi|187775168|gb|EDU38970.1| hypothetical protein CLOSPO_01832 [Clostridium sporogenes ATCC 15579] Length = 502 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 78/523 (14%), Positives = 155/523 (29%), Gaps = 101/523 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-IM 62 E+ F LG + + L K I++DCG ++ D G D + Sbjct: 1 MEIKF--LGAACCVTGSCHLL----KIKDKNILLDCG-TYQGKDEVG------DRNYSFK 47 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIPCI 121 + K++ + ++HAH DH G + L+ V ++ L + + Sbjct: 48 FDVKDIDCVILSHAHIDHSGRIPLLYKLGYRGKVISTKATADLCSIMLPDSGHILESE-V 106 Query: 122 SFQAGDKVDVG---------------------------------AFSIESVRVNHSIPET 148 ++ ++ G I + H + Sbjct: 107 EWKNRKRIRSGLDPIEPLYTLKIAQMSTSLFEGYNYNEYIEIFPNLKIRFLDSGHLLGSA 166 Query: 149 MA-LVIRSPV--GNIVHTGDWKLDDDAILGDVTDKDSLCA-IGNEGILALMCDSTNAMRE 204 + L I IV++GD T+ L + + L+ ++T R Sbjct: 167 ITELYITENDKEFKIVYSGDLGN---------TNLPILKDPVQVDYADYLLMETTYGNRV 217 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI------GRKIVLLG 258 I +K+ I+ I K V S +V R + +I + V + Sbjct: 218 HDNI-NSQLKQLIHIIKDTFKRGGNVIIPSFAVGRTQEVIYALNKYVESNILKNIKVYVD 276 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR------------ 306 S L + + I D+ + G P E + T S E Sbjct: 277 SPLASEATKIFNEYTIDFDEDAQKLLNKGDNPLEFNGLYFTNSPQESMELNKIKTGAIII 336 Query: 307 --SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 S + + R + + + A G + +++ +V E Sbjct: 337 SASGMCEAGRIRHHL----KHNLWRKECSIVFVGYQAEGTLGQKILSGAKKVKLFGEEIA 392 Query: 365 VHV--------SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 V+ SGH N L + +P+ ++ IHGE + L +++ Sbjct: 393 VNAEIYNLPSLSGHADKNGLLNWLESFREKPKEVILIHGEKDSRDYFRNLLIEKNYNTFC 452 Query: 415 PVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 P + ++ + + + + + D + Sbjct: 453 P----NIGDIYSSEFKGQRKSEIKNKITNLLSSIEDIDSLNKE 491 >gi|89097941|ref|ZP_01170828.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] gi|89087443|gb|EAR66557.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] Length = 269 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+A P R WI++D GV P + + +A+ +THAH D Sbjct: 26 NIAFLTGLGPKGRDWILVDAGV--PLSGGF----IIRFAEKMFGRESRPLAVLMTHAHFD 79 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAK 108 H G L + S VPVYA + L K Sbjct: 80 HIGGLRAILSKWDVPVYAHRAELPYLTGK 108 >gi|195952855|ref|YP_002121145.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932467|gb|ACG57167.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 212 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 24/166 (14%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M+ ++ +P + E N + + +++ I+ID P D+ + D Sbjct: 1 MEKLKIETIPTKPIDE---NCIVI--KNEDTKEAIVID-----PGSDIQAILETIGDF-- 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV------YERV 114 L+AI TH H DH G + L +VP Y LL + Sbjct: 49 ------KLVAILATHGHYDHIGQVATLKERYNVPFYMHKEDEFLLNDELFPGFSIYLNAK 102 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + P + GDK+ + + IE + P + S I Sbjct: 103 TPPKPDFYIKDGDKLSIASVDIEIIHTPGHTPGGCCFYLPSQNTLI 148 >gi|253682453|ref|ZP_04863250.1| metallo-beta-lactamase family protein [Clostridium botulinum D str. 1873] gi|253562165|gb|EES91617.1| metallo-beta-lactamase family protein [Clostridium botulinum D str. 1873] Length = 201 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 31/156 (19%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP--DITFIMKERKN----LMAI 71 G N I+ID ++ + G ++ P D + + I Sbjct: 12 GANCY------------ILID------EETMVGC-IIDPGGDADRLANIIDELNIEIKFI 52 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER--VSKKIPCISFQAGDKV 129 +TH H DH G + L +VPVY + L+E K + + + Sbjct: 53 LLTHGHMDHVGGVEVLREKYNVPVYINGKDKELMEKGTQVFGRIWGKTPEDKELKDEEII 112 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +G+ I + P M+ ++ + +V TGD Sbjct: 113 KLGSLDIRCIETPGHTPGGMSFLVNN----VVFTGD 144 >gi|303284621|ref|XP_003061601.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456931|gb|EEH54231.1| predicted protein [Micromonas pusilla CCMP1545] Length = 698 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 104/327 (31%), Gaps = 37/327 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L V+ S L + + K + G V Sbjct: 368 FLTHFHADHYAGLTRSTPSEGCVVWCSRPTARLCQLRL----GISKSRLRAVDVGRDFIV 423 Query: 132 GAFSIESVRVNHSIPETMALVIRSP---VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V NH P + +V G ++ TGD + L + Sbjct: 424 EGVKCRFVHANH-CPGAVMIVFDDIPGGGGPVLATGDCRFHASMTLDPG--LLRIQERRP 480 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMK----NAKGCVLVTTFSSSVSRIRSII 244 A+M D+T + ++ + K + +K N K L T++ + + R Sbjct: 481 ----AVMLDTTYCDPKHAFPPQEEVLKAVAVAVKAENFNPKCLFLFGTYT--IGKERVFF 534 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + A+ +G+K+ +G ++V+ D D+ ++ + +V + Sbjct: 535 EAAKALGKKV-YVGKQKRQVLDALGDA----IDKTYMDSVTTDDTETNLHVVPMGSTSFA 589 Query: 305 PRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + + + V + F E A + Sbjct: 590 RMKTILRYYKNRYDTVIAFKPTGWTF--------EKAAK----TARATKRTQRGSLIQYA 637 Query: 365 VHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + S H +L+ +W++P+ ++ Sbjct: 638 LPYSEHSSFTELRAFMRWLKPRAILPH 664 >gi|212638742|ref|YP_002315262.1| Zn-dependent hydrolase [Anoxybacillus flavithermus WK1] gi|212560222|gb|ACJ33277.1| Zn-dependent hydrolase [Anoxybacillus flavithermus WK1] Length = 210 Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 27/167 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E + PLG + N + + + ++ D G + + I + Sbjct: 1 MKWERI---PLGPLQ---TNAYVLVH---ENGTCLIFDPG---SEGEKL--------IHY 40 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I +A+ +THAH DH GA+ D+ + +PVY L + Sbjct: 41 IETNGWTPLAVLLTHAHFDHIGAVDDVKNKWSIPVYVHKKEQHWLTDPMKNGSLLFMGEA 100 Query: 121 ISFQAGD-------KVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 I+ D + +G FS++ P +++ I + Sbjct: 101 ITTNDADVLLEGEKTLTIGDFSLQVFETPGHSPGSVSYYIEDAQVIV 147 >gi|57641813|ref|YP_184291.1| metallo-beta-lactamase superfamily protein [Thermococcus kodakarensis KOD1] gi|57160137|dbj|BAD86067.1| Alkylphosphonate utilization protein PhnP homolog, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 56 PDITFIMKERK-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-- 112 PD+ + ++ + +FITHAH DH +L F + VY+ AI + + Sbjct: 52 PDLHYHLERLNRKVEKVFITHAHFDHIAGFPELQVFKRIDVYSHRQAIDMAKHLSAIFLG 111 Query: 113 ---RVSKKIPCISFQAGDKVDVGAFSIESVRVNH-SIPETMALVIRSPVGNIVHTGD 165 ++ + G ++ + R H SI + I TGD Sbjct: 112 GAAPENRDWGYHELEFGKWYEIDGMKVHHFRTTHRSIENAGGFLFEIKGKRIAVTGD 168 >gi|222055978|ref|YP_002538340.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221565267|gb|ACM21239.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 14/138 (10%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + +++D G+S + + + I E + AI I+H H+DH L Sbjct: 17 IENGETKLLLDAGLSAVE--------ILRRLHAIGVEGSEINAIMISHEHQDHIRGAGAL 68 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 L +PV S + R K I F++G +I+ + H + Sbjct: 69 ARKLKIPVILSYPT------HKEASRYLAKTQVIEFESGYSFCFRDLAIDPFPITHDACD 122 Query: 148 TMALVIRSPVGNIVHTGD 165 + VI S G + D Sbjct: 123 PVGFVIESSDGAMGVATD 140 >gi|308805462|ref|XP_003080043.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] gi|116058502|emb|CAL53691.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] Length = 517 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 121/402 (30%), Gaps = 24/402 (5%) Query: 67 NLMAIFITHAHEDHY---GALHDLWSFLHVPVYASPFAIGLLEAKR-VYERVSKKIPCIS 122 N+ A F+THAH DH GA L +Y +L +K R K + Sbjct: 31 NIRAYFLTHAHADHVVGLGARRWSPETLGARIYCDEITREILVSKWPTLGRHVKALERNR 90 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + H P ++ + + P G +VHTGD++ +D + + Sbjct: 91 GHGVRLTRETTIEVTLIDAGH-CPGSVVVCVEGPNGRLVHTGDFRRED-----WIAREAL 144 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 A+ + L D+T + ++I + G +V S + + Sbjct: 145 PRAMTRAPVDYLFLDNTYCHPKHAFPGRAEATEDIVRFCVSNPGRAIVLGIDS-LGKEDL 203 Query: 243 IIDIAEQIGRKIV-----LLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 +I ++E IG + L SS R ++ + +++ V Sbjct: 204 VIAVSEAIGAPVEIPDERFLPSSYTRFLTGHRACERENFIRRSMNESLDVTRRTHVRCVP 263 Query: 298 ATGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 + AL + R + + + + G V+ + + Sbjct: 264 KQHVRPSTLRALVKGLRHDDAPPLAILPTGWSAIERQRGEGAGVSGPSEHDPIDSVVEFD 323 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 V S H ++L+ + +RP + + A E V Sbjct: 324 DEAGRIVAVPYSLHAPYDELEAFVRALRPACVF----GNTRVDADAEAPRD---PAVWFE 376 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKR 458 +++ + L + D + R Sbjct: 377 SLCSQKDTQLKLAAYQEDLERAMHLDEPIGDVVIEDAVLKSR 418 >gi|60682330|ref|YP_212474.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|253564790|ref|ZP_04842246.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|265766234|ref|ZP_06094275.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|60493764|emb|CAH08554.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|251946255|gb|EES86632.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|263253902|gb|EEZ25367.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|301163804|emb|CBW23359.1| putative hydrolase [Bacteroides fragilis 638R] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 59/261 (22%) Query: 4 EELVFLPLG---GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSFPKDDL 48 ++ L G GV EIG A+ + I++DCG Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPRDCRLRTSALVYTDDATILLDCG-------- 52 Query: 49 PGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAIG 103 PD + + A+ I+H H DH G L DL F VP+YA + Sbjct: 53 -------PDFREQMLRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPIYAETYTAE 105 Query: 104 LLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 L ++ IP + V + +RV H ++ + Sbjct: 106 RLRSRMPYCFVEHSYPGVPNIPLREIEPNRPFLVNHTEVLPLRVMH----GKLPILGYRI 161 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 G + + D + D +S + +L + NA+R + + + + + Sbjct: 162 GKLGYITDMLT--------MPD-ESFEQLQGIEVLVM-----NALRIAPHNTHQSLSEAL 207 Query: 218 YDIMKNAKGCVLVTTFSSSVS 238 + + + S + Sbjct: 208 EAVKRIGAKETWLIHMSHHIG 228 >gi|171056881|ref|YP_001789230.1| beta-lactamase domain-containing protein [Leptothrix cholodnii SP-6] gi|170774326|gb|ACB32465.1| beta-lactamase domain protein [Leptothrix cholodnii SP-6] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 40/182 (21%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G I ++ + ++ID G L E + Sbjct: 6 LGCSGSIALDCRTTSFLL---NDRVLIDAGTGVGDLAL--------------DELAQIDH 48 Query: 71 IFITHAHEDHYGALHDL----------WSFLH-VPVYASPFAIGLLEAKRVYERVSKKIP 119 I I+H+H DH + L + V+A P I L + Sbjct: 49 ILISHSHLDHVLGIPLLADSVMQRRLAREDYKPIQVHALPATIDALRRHIFNNVIWPDFT 108 Query: 120 CISFQAGDKVDVG-----------AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +++ IE + +H++P + + G ++TGD Sbjct: 109 RLPTPERPIIELVTLEVGQRLSLCNLPIEVLPASHTVP-ACGFGVATTSGWWIYTGDTGP 167 Query: 169 DD 170 + Sbjct: 168 NP 169 >gi|153808231|ref|ZP_01960899.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] gi|149129134|gb|EDM20350.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 41/240 (17%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETGDARILIDCG---------------PDFRTQVLRLPFERIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 DL F VP+YA + L + Y V + P + ++ VG + Sbjct: 85 DLRPFCRFGSVPIYAEQYVSDALRLRMPYCFVDHRYPGVPDIPLQEISVG--QKFFINTT 142 Query: 143 HSIP----ETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 IP ++ +G + + D + + L GI L+ Sbjct: 143 EVIPLRVMHGRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLIV-- 189 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 NA+R + + +++ + + S + + + ++ + G Sbjct: 190 -NALRIAPHPTHQDLEEALAVAQRIRAKKTYFIHMSHDMG-LHAEVERKLPENIHLAYDG 247 >gi|325124355|gb|ADY83878.1| enzyme with metallo-hydrolase/oxidoreductase domain [Acinetobacter calcoaceticus PHEA-2] Length = 214 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK----NLMAIFITH 75 N +L +++ ++ID G D + + KE + + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAG---------------GDASVLKKEVEALGLKVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L +VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWNVPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P ++ + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPG--HVIFYNKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|294778355|ref|ZP_06743778.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] gi|294447617|gb|EFG16194.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 78/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGRMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHHTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHIG 234 >gi|290991717|ref|XP_002678481.1| beta-lactamase family exonuclease [Naegleria gruberi] gi|284092094|gb|EFC45737.1| beta-lactamase family exonuclease [Naegleria gruberi] Length = 658 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 74/500 (14%), Positives = 154/500 (30%), Gaps = 95/500 (19%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 E+ F G G + + + YGS ++ +IDCG+ +L + I+ Sbjct: 119 EISFF--GASGTVTGSKHMITYGSLNA----LIDCGMYQGLKELRERNWKL--ISSSKPV 170 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSKK 117 AI ITH+H DH G L + + P+Y + L + A+ E Sbjct: 171 ETMCDAIIITHSHLDHTGYLPRMVALGFTGPIYMTEQTFNLTKLILLDSARLQEEDAHYA 230 Query: 118 IPCISFQAGDKVDV------------------------------GAFSIESVRVNHSIPE 147 + + + + FS + H + Sbjct: 231 NHKETTKHEVALPLYSEEDVLNCFKLVRTVKYGEKIVVKSRLDEDKFSFKYFNAGHLLGS 290 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT- 206 + + I+ +GD + G ++C++T + Sbjct: 291 SFVEITLDTKEKIIFSGDLGTFHTSTPMQQ------QPQLPMGADYVICEATYGGKSHID 344 Query: 207 -----------CISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQIGR 252 I E +K + +++ G +L+ F+ + R ++I + Sbjct: 345 FATGRAAEDQDYIIETKVKPALKQAVEHIVENDGVILIPAFA--IGRSQTIAYHLLK--M 400 Query: 253 KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQL 312 +L ++ + V + Q +L DE VI S E + +L Sbjct: 401 MREKEIPTLPVHMNSPMSVEALDFYQQYLLDEHQKDAHEILRDVICHNSAKESKELHKKL 460 Query: 313 SRGEMRNVK-----LAEKDTVIFSSRAIPGNEVAI-------------GHIKNRLVEQGV 354 G + V + +F + +E + + N + + + Sbjct: 461 KDGYSKCVIISSSGMMTGGRCLFHFEELAPHEKNVLLLSGFQAEGTRGRDLLNGVRDIKL 520 Query: 355 RVIAEDAECPV----HVSGHPYPNDLKRMYQWI---RPQVLVAIHGEPLHLVAHKELALQ 407 + +C V +S H +D+ + + +P+++ +HGEP L + Sbjct: 521 LGKTVNVKCQVMQVQGLSAHGDTDDVIKWIEAAKNPKPKMVFVVHGEPTSLRSMAREICV 580 Query: 408 EGIACVPPVRNGKMLRLFPD 427 E + G + + Sbjct: 581 ELDVNALVPKRGTTFHMRTE 600 >gi|255526673|ref|ZP_05393578.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296187178|ref|ZP_06855575.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255509653|gb|EET85988.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296048213|gb|EFG87650.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 201 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 19/177 (10%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ I++D G ++ I I +E + I +TH H D Sbjct: 16 NCYIV--IDQETKDCIVMDPG---GDEEDL--------IKIIKEENVQVKYILLTHGHLD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA L P+ S ++ + GD VG+ I+ + Sbjct: 63 HTGAAVSLKKEFKAPICISNEDYKMISKGASMYGDIDNNVDQFIKEGDIFKVGSMEIKCI 122 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGILAL 194 P ++ ++ + TGD + D +++ E ++ L Sbjct: 123 HTPGHTPGSLCFLMGDS----IFTGDTLFAGSIGRTDLEAGDFNAIVKNIKEKLMIL 175 >gi|254468140|ref|ZP_05081546.1| metallo-beta-lactamase family protein [beta proteobacterium KB13] gi|207086950|gb|EDZ64233.1| metallo-beta-lactamase family protein [beta proteobacterium KB13] Length = 250 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 69/192 (35%), Gaps = 23/192 (11%) Query: 7 VFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 F LG E N L + + +M+DCG ++ + + +L D+TF Sbjct: 3 SFASLGSGSE--GNSFLV----KTDKSIVMVDCGFNYKETENRLSEL---DLTF-----S 48 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 ++ I ITH HEDH A+ + ++ + S +++ G Sbjct: 49 DIDHILITHEHEDHMRAIKMIIKKENIRISCSYGTA---------KKIGIIDEVNIVNPG 99 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 D ++ IE V V H E + + I D+ I+ ++ + L Sbjct: 100 DMLEENDLQIEVVPVPHDAREPCHYIFKKDALKIGIITDFGSLTPKIIESYSNLNYLVIE 159 Query: 187 GNEGILALMCDS 198 N LM S Sbjct: 160 ANHDASLLMKSS 171 >gi|42527049|ref|NP_972147.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] gi|41817473|gb|AAS12058.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] gi|325474103|gb|EGC77291.1| metallo-beta-lactamase [Treponema denticola F0402] Length = 320 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 78/272 (28%), Gaps = 36/272 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVF-PDITFIMKERKNLMAIFI 73 G IG N A + ++ D G + G+DL+ PD + +F Sbjct: 56 GTIGSNTACVEVETDDGGH-LIFDAGTGIRE---LGIDLMKRPDYG-----KNTTYHLFF 106 Query: 74 THAHEDHYGALHDLWSFLHVP----VYAS-PFAIGLLEA----------KRVYERVSKKI 118 +H H DH L VY++ A LE + Sbjct: 107 SHFHWDHIQGLPFFNPAYDPRNKIIVYSTRKKAKEFLEDQMKYPYFPISMLGEDGFGASF 166 Query: 119 PCISFQAGD-KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + V++G I RV H A + I+++ D +L + Sbjct: 167 EFKYIEPDQKYVEIGDTKIGWHRVRHP-GGCTAYSVIEKGKKIIYSTDTELRPRDFERNE 225 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK---KNIYDIMKNAKGCVLVTTFS 234 + + I A + + ++EG S + ++I A T Sbjct: 226 QNAEFYTDAEMLIIDAQYTLTDSILKEGWGHSTFSVAIDFAAGWNIKSIALFHHEPTYHD 285 Query: 235 SSVSRIRSIIDIAEQI------GRKIVLLGSS 260 V ++ D I G S Sbjct: 286 KKVFSLKQTADWYRDCSRAPDIKIFIAQEGRS 317 >gi|56420291|ref|YP_147609.1| hypothetical protein GK1756 [Geobacillus kaustophilus HTA426] gi|56380133|dbj|BAD76041.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 282 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 16/93 (17%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPG-VDLVFPDITFIMKE---RKNLMAIFITH 75 N+ L G P ++++D G +PG D + + + AI +TH Sbjct: 41 NICLV--GRPDDHAFVLVDAG-------MPGSADDIV---SVVEDRFGSGSRPQAIVLTH 88 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 H DH GA+ +L +VPVYA P + L K Sbjct: 89 GHFDHVGAIVELVKHWNVPVYAHPAELPYLTGK 121 >gi|257876963|ref|ZP_05656616.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257811129|gb|EEV39949.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 206 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 20/97 (20%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + L G V E N L ++ID G + I I K Sbjct: 1 MKIIGLVTGPVQE---NCYLI----WKEDYLLIIDPG---AEAARL--------IAEIEK 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 AI +TH H DH GA+ L + +PVY SP Sbjct: 43 TGAKPAAILLTHTHYDHIGAVDHLRDYYQIPVYVSPL 79 >gi|78066868|ref|YP_369637.1| Beta-lactamase-like [Burkholderia sp. 383] gi|77967613|gb|ABB08993.1| Beta-lactamase-like protein [Burkholderia sp. 383] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPG-VDLVFPDITFIMK 63 + F LG E N + S ++ +++DCG S + + G ++L D Sbjct: 1 MRFSSLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIGD------ 52 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 L A+ ITH H DH G+ L +P+Y S + A + Sbjct: 53 ----LDAVLITHEHSDHVGSALTLARRGSLPLYMSWGTARAVGA------DEADVDLHVL 102 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + V + ++ V H E + V + D + Sbjct: 103 WGDETVAIRDLAVMPYTVPHDAREPLQFVFMDGASRLGVLTDVGM 147 >gi|312871260|ref|ZP_07731358.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 3008A-a] gi|311093274|gb|EFQ51620.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 3008A-a] Length = 272 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 56/177 (31%), Gaps = 26/177 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITF 60 + L G G N L S +++D G+S K GVD+ Sbjct: 9 RISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------- 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 54 -----KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 109 NIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 164 >gi|259500802|ref|ZP_05743704.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus iners DSM 13335] gi|309804117|ref|ZP_07698198.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 11V1-d] gi|315654105|ref|ZP_07907021.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|259167496|gb|EEW51991.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus iners DSM 13335] gi|308163885|gb|EFO66151.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 11V1-d] gi|315488801|gb|EFU78447.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] Length = 272 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 56/177 (31%), Gaps = 26/177 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITF 60 + L G G N L S +++D G+S K GVD+ Sbjct: 9 RISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------- 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 54 -----KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 109 NIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 164 >gi|212694000|ref|ZP_03302128.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|237723872|ref|ZP_04554353.1| metal-dependent hydrolase [Bacteroides sp. D4] gi|212663532|gb|EEB24106.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|229437698|gb|EEO47775.1| metal-dependent hydrolase [Bacteroides dorei 5_1_36/D4] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 79/267 (29%), Gaps = 67/267 (25%) Query: 6 LVFLPLG-----GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 + LG GV EIG + P + I+IDCG Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLRILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKERKN---LMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAI 102 PD M + L + ITH H DH G L DL F VPVYA + Sbjct: 53 -------PDFREQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRFRDVPVYAEQYTA 105 Query: 103 GLLEAKR------VYERVSKKIPCISFQAGDKVDVGA-----FSIESVRVNHSIPETMAL 151 L + +I G +G + +RV H + Sbjct: 106 ERLRQRIPYCFAEHLYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGY 165 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I W D + G D +G+ L+ NA+R + + Sbjct: 166 RIGKMA--------WITDMLTMPGAEYDL-------LQGLDVLVM---NALRPQPHHTHQ 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +K+ + + + G S + Sbjct: 208 NLKEALDNAQRIGAGETYFIHMSHHMG 234 >gi|237718355|ref|ZP_04548836.1| hydrolase [Bacteroides sp. 2_2_4] gi|293372865|ref|ZP_06619239.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|299146577|ref|ZP_07039645.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] gi|229452288|gb|EEO58079.1| hydrolase [Bacteroides sp. 2_2_4] gi|292632154|gb|EFF50758.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|298517068|gb|EFI40949.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETDDARILIDCG---------------PDFRTQVLRLPFEKIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + ++ VG + Sbjct: 85 DLRPFCRFGSVPIYAENYVAQGLRLRMPYCFVDHRYPGVPDIPLQEISVGQAFSVNHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L GI L+ Sbjct: 145 LPLRVMH----GRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLVV 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R T + + +++ + + S + + + ++ + + Sbjct: 190 ---NALRIATHPTHQNLEEALAVAQRIQAKKTYFIHMSHDMG-LHAEVEKSLPENIHLAF 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGLDIY 251 >gi|227511170|ref|ZP_03941219.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227523376|ref|ZP_03953425.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227085652|gb|EEI20964.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227089482|gb|EEI24794.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 274 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M+N++ + L G G N+ + + I++D G+S K + Sbjct: 8 MENDDMQISVLASGSTG----NVTYVE----TPQHKILLDAGLSGKKIANL--------M 51 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 I ++ ++ + +TH H DH ++ L + VYA+ + ++ + Sbjct: 52 CSIGRDINDVDTLLVTHEHSDHRQSVGVLARKYDLNVYANQGTWDAMRSRI---GKIPEE 108 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 F +D G IES V+H E V + V D + D + Sbjct: 109 EINIFPPDTVMDFGDIDIESFSVSHDAAEPQFYVFHHRNKSFVVLTDTGYVSDRMEGVIK 168 Query: 177 VTD 179 D Sbjct: 169 DAD 171 >gi|319950976|ref|ZP_08024847.1| hypothetical protein ES5_15198 [Dietzia cinnamea P4] gi|319435358|gb|EFV90607.1| hypothetical protein ES5_15198 [Dietzia cinnamea P4] Length = 219 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 26/159 (16%) Query: 8 FLPL-GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L GG E+ N+ + G + +ID P +D V + Sbjct: 24 IFALDGGEWEVDNNIWILG----DDSEVFVIDA----AHTAQPIIDAV---------GGR 66 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I +HAH DH +L P+ P K +++ + Q G Sbjct: 67 KVKGILCSHAHNDHITVAPELSEKFDAPILVHPG------DKMLWDETHPDVSHGELQDG 120 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ ++ + P + V P ++ +GD Sbjct: 121 QQFEIAGTRVDVMNTPGHSPGS--CVFHVPEAGVLFSGD 157 >gi|317486835|ref|ZP_07945650.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] gi|316921911|gb|EFV43182.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia 3_1_6] Length = 209 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + ++ L AI TH H DH + L PVY LL + P Sbjct: 44 LKEQNLTLRAILCTHFHFDHLYGVAALHEATGAPVYGPAGDASLLGTELGGSGAWGFPPV 103 Query: 121 ISFQAGD----KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AIL 174 +F+ D G+ E + P ++++ P N + TGD Sbjct: 104 TTFKWEDLKEGPHTFGSIKCEVLTTPGHTPGSLSIYF--PELNSIMTGDLLFYHSVGRTD 161 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + +++L ++ I L ++ A+ G + + + + Sbjct: 162 FPGSSQEALRKSLHKKIFILPQET--AVYPGH-GPNTNVGEELAN 203 >gi|312872779|ref|ZP_07732844.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2062A-h1] gi|325912252|ref|ZP_08174649.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 143-D] gi|311091821|gb|EFQ50200.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2062A-h1] gi|325475911|gb|EGC79080.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 143-D] Length = 265 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 26/178 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 + L G G N L S +++D G+S K GVD+ Sbjct: 1 MRISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 47 ------KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 101 INIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 157 >gi|302190748|ref|ZP_07267002.1| hypothetical protein LineA_01905 [Lactobacillus iners AB-1] gi|309804837|ref|ZP_07698899.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 09V1-c] gi|312873303|ref|ZP_07733358.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2052A-d] gi|325913657|ref|ZP_08176019.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 60-B] gi|329919739|ref|ZP_08276690.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 1401G] gi|308165776|gb|EFO67997.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 09V1-c] gi|311091183|gb|EFQ49572.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2052A-d] gi|325477016|gb|EGC80166.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 60-B] gi|328937086|gb|EGG33514.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 1401G] Length = 265 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 26/178 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 + L G G N L S +++D G+S K GVD+ Sbjct: 1 MRISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 47 ------KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 101 INIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 157 >gi|204789669|gb|ACI02045.1| hypothetical protein [uncultured bacterium] Length = 208 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 18/146 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ I+ D P D G+ ++K + AI +TH H D Sbjct: 16 NCYFV--YDDEKKEAIVFD-----PAADGVGI------YNALLKNEIKVSAIMLTHGHFD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL---EAKRVYERVSKKI--PCISFQAGDKVDVGAF 134 H ++L V +YAS LL E + + + +KV + Sbjct: 63 HIMGANELREKAGVKIYASELEKDLLASSELNVSNQIGRNYTVEADVYLKDNEKVTINGI 122 Query: 135 SIESVRVNHSIPETMALVIRSPVGNI 160 I+ + + +I I Sbjct: 123 EIKMISTPGHTAGSCCYLIEGEKLLI 148 >gi|53714274|ref|YP_100266.1| putative hydrolase [Bacteroides fragilis YCH46] gi|52217139|dbj|BAD49732.1| metal-dependent hydrolase [Bacteroides fragilis YCH46] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 59/261 (22%) Query: 4 EELVFLPLG---GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSFPKDDL 48 ++ L G GV EIG A+ + I++DCG Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPRDYRLRTSALVYTDDATILLDCG-------- 52 Query: 49 PGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAIG 103 PD + + A+ I+H H DH G L DL F VP+YA + Sbjct: 53 -------PDFREQMLRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPIYAETYTAE 105 Query: 104 LLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 L ++ IP + V + +RV H ++ + Sbjct: 106 RLRSRMPYCFVEHSYPGVPNIPLREIEPNRPFLVNHTEVLPLRVMH----GKLPILGYRI 161 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 G + + D + D +S + +L + NA+R + + + + + Sbjct: 162 GKLGYITDMLT--------MPD-ESFEQLQGIEVLVM-----NALRIAPHNTHQSLSEAL 207 Query: 218 YDIMKNAKGCVLVTTFSSSVS 238 + + + S + Sbjct: 208 EAVKRIGAKETWLIHMSHHIG 228 >gi|309809755|ref|ZP_07703609.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 2503V10-D] gi|308169934|gb|EFO71973.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 2503V10-D] Length = 265 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 26/178 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 + L G G N L S +++D G+S K GVD+ Sbjct: 1 MRISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 47 ------KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 101 INIFAPETTKI-FDDLEVYSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 157 >gi|294501241|ref|YP_003564941.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294351178|gb|ADE71507.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] Length = 210 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 24/159 (15%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ ++ D G G LV F+ K+ Sbjct: 6 IPLGPIQ---TNCYVV---ANEKKECLVFDPGAQ-------GKQLV----EFLEKQTYKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG-LLEAKRVYERVSKKIPCISFQAGD 127 +AI +THAH DH G + ++ + +P+Y L + + + A D Sbjct: 49 LAILLTHAHFDHIGGVDEVMNHYSIPLYVHKNEKEWLHNSDLNGSKFFDLGEITAPDATD 108 Query: 128 KV------DVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + +G+F E P +++ + + Sbjct: 109 IISVEGNLTIGSFQFEVYETPGHSPGSVSYYFKLGNFVV 147 >gi|253572233|ref|ZP_04849636.1| hydrolase [Bacteroides sp. 1_1_6] gi|251838008|gb|EES66096.1| hydrolase [Bacteroides sp. 1_1_6] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETEDARILIDCG---------------PDFRAQVLHLPFEKIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + ++++G + Sbjct: 85 DLRPFCRFGAVPIYAEEYVARALRLRMPYCFVDHRYPGVPDIPLQEIEIGHAFSIHHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + EGI L+ Sbjct: 145 VPLRVMH----GRLPILGYRIGRLGYITDMLTMPEESYEQL-----------EGIDVLIM 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + +++ + + S + + ++ + Sbjct: 190 ---NALRIAPHPTHQNLEEALKAAERIRAKETYFIHMSHDMG-LHKKVEKELPENIHLTY 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGMEII 251 >gi|226358161|ref|YP_002787900.1| metallo-beta-lactamase superfamily [Deinococcus deserti VCD115] gi|226319804|gb|ACO47798.1| putative metallo-beta-lactamase superfamily [Deinococcus deserti VCD115] Length = 312 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 10/81 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ L G W+++D G+ PG + + + AI +TH H D Sbjct: 36 NVYLLGLPGEP---WVLVDAGL-------PGTAGLIQAAARKIHGERPPEAIVLTHGHLD 85 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H GAL L +VPVYA Sbjct: 86 HIGALKALKVAWNVPVYAHSL 106 >gi|309806465|ref|ZP_07700470.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167138|gb|EFO69312.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 03V1-b] Length = 272 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 56/177 (31%), Gaps = 26/177 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITF 60 + L G G N L S +++D G+S K GVD+ Sbjct: 9 RISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------- 53 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 54 -----KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQI 108 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 109 NIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 164 >gi|257869959|ref|ZP_05649612.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804123|gb|EEV32945.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 205 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 20/97 (20%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + L G V E N L ++ID G + + + I K Sbjct: 1 MKIIGLVTGPVQE---NCYLV----WQDGHLLIIDPGA--------EAERIIAE---IEK 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 AI +TH H DH GA+ L + +PVY SP Sbjct: 43 TEAKPSAILLTHTHYDHIGAVDHLRDYYSIPVYVSPL 79 >gi|149276321|ref|ZP_01882465.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] gi|149232841|gb|EDM38216.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] Length = 460 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 70/482 (14%), Positives = 153/482 (31%), Gaps = 97/482 (20%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER------ 65 G ++ +M L I+IDCG+ + K+ T+ + + Sbjct: 7 GAARQVTGSMHLL----QLKDYNILIDCGLDYEKE------------TYQEENQYFPFDP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------------- 105 +L + +THAH DH G L L + +P L Sbjct: 51 ADLDVVILTHAHIDHSGNLPTLVRMGFQGQILCTPPTADLSELLLLDSVNIFLSKQQKRS 110 Query: 106 EAKRVYERVSK-KIPCISFQAGDKVDVGAF----------SIESVRVNHSIPETMALVIR 154 + K + ++ F ++ + V H + ++ Sbjct: 111 KGKNRSSGPKPLYLQKHVMDTVERFVTVGFHKQFRINDQVTLCFIPVGHLLGAAAIVLTI 170 Query: 155 S---PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-- 209 + I TGD + +L D + + + L+C+ST + + + Sbjct: 171 NDEGREKKIAFTGDIGRKNYPVLV---DPEVIPE-----VDFLVCESTYGGKFHSKLETL 222 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLGSSLK 262 E+ + + I + G +++ FS + R ++++ QI KI + + Sbjct: 223 EQKLVQTINEACVKFPGRLIIPAFS--IGRTQALVYALNQIFSKGLLPPVKIFVDSPLAE 280 Query: 263 RVVSVAIDVGIIKKDQL--------FLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR 314 V + + D Y +++ ++ + EP ++ Sbjct: 281 FATDVYRRHHDLLNEDAKAFYRSKGDEFDFDELSYVQDKKESMSVSNYHEPCIIISSAGM 340 Query: 315 ------GEMRNVKLAEKDT----VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP 364 + + + + ++ G+ + G RL + + V A + Sbjct: 341 LEGGRIQDHLYYNIQNYYCTILFIGYCAKGTLGHRLLRGDPIIRLRNRDLMVYATIQQTD 400 Query: 365 VHVSGHPYPNDLKRMYQWIRPQV--LVAIHGEPLHLVAHKELALQEGIACVPPVRNGKML 422 + +SGH DL Q + + + +HGEP + + + + V G++ Sbjct: 401 L-LSGHGDHEDLMNTVQQQKVENTRIFLVHGEPKSMQSLSDALTEARYR-VDVPEKGEVF 458 Query: 423 RL 424 L Sbjct: 459 EL 460 >gi|46199561|ref|YP_005228.1| hydrolase [Thermus thermophilus HB27] gi|46197187|gb|AAS81601.1| probable hydrolase [Thermus thermophilus HB27] Length = 207 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 22/151 (14%) Query: 6 LVFLP--LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + P LG + E N L G ++ID G D P L T + Sbjct: 1 MRVFPVTLGPLQE---NAYLVETGEGP----VLIDPG------DEPEKLLALFQTTGLT- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 AI +THAH DH GA+ L L +PVY P + L E + R Sbjct: 47 ----PRAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARAWGLAIPKPP 102 Query: 124 QAGDKVD--VGAFSIESVRVNHSIPETMALV 152 ++ +G F + + + P +A Sbjct: 103 LPVRPLEEGMGLFGFQVLHLPGHSPGHVAFY 133 >gi|257868074|ref|ZP_05647727.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257874404|ref|ZP_05654057.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257802157|gb|EEV31060.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257808568|gb|EEV37390.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 206 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 20/97 (20%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + L G V E N L ++ID G + I I K Sbjct: 1 MKIIGLVTGPVQE---NCYLI----WKEDFLLIIDPG---AEAARL--------IAEIEK 42 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 AI +TH H DH GA+ L + +PVY SP Sbjct: 43 TGAKPAAILLTHTHYDHIGAVDHLRDYYQIPVYVSPL 79 >gi|86158201|ref|YP_464986.1| RNA-metabolising metallo-beta-lactamase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774712|gb|ABC81549.1| RNA-metabolising metallo-beta-lactamase [Anaeromyxobacter dehalogenans 2CP-C] Length = 460 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 12/101 (11%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G + + L GS +++D G+ F + P + + R Sbjct: 4 IRF--LGAAGTVTGSRFLVETGSVR----VLVDAGL-FQGHKELRLRNRAP---WPVSPR 53 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 L A+ +THAH DH GAL L PV+ +P L Sbjct: 54 S-LTAVVLTHAHVDHSGALPLLGRQGFRGPVHCTPATRDLA 93 >gi|319650137|ref|ZP_08004286.1| YhfI protein [Bacillus sp. 2_A_57_CT2] gi|317398318|gb|EFV79007.1| YhfI protein [Bacillus sp. 2_A_57_CT2] Length = 244 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 41/198 (20%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY ++IDCG GV + + L A+ I+H H DH + Sbjct: 21 GYLLEHDGFHLLIDCGS--------GVLSKMQNFFQPEE----LDAVIISHYHPDHIADI 68 Query: 85 H----------DLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L P+Y + + + + + G Sbjct: 69 GVLQHARLIQSFLGRKTDTLPIYGHSLD----QYEFAKFTYKDITKGVCYDPDGTLFAGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 F I ++ NH +P A+ I + +++T D K+ L A +E Sbjct: 125 FQIRFLKTNHPVP-CYAMRIEADGKTLIYTADTSY-----------KEELAAF-SENADL 171 Query: 194 LMCDST-NAMREGTCISE 210 L+C+ + G Sbjct: 172 LVCECNFYGHQNGKNAGH 189 >gi|94264884|ref|ZP_01288658.1| Beta-lactamase-like [delta proteobacterium MLMS-1] gi|93454654|gb|EAT04922.1| Beta-lactamase-like [delta proteobacterium MLMS-1] Length = 261 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 64/202 (31%), Gaps = 42/202 (20%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL------PGVDLVFPDI 58 EL F LGG + N GS ++ID G F +L GV+ Sbjct: 3 ELKFAVLGGGSK--GNATYVEAGS----SRLLIDAG--FSGRELESRLAALGVE------ 48 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 L AI ++H H DH L H+P+ + + + + Sbjct: 49 ------PGQLTAILLSHEHGDHIRGAGVLSRRHHLPLLLNKATLAAA-----GRELGRPA 97 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 F G G F I ++H E + ++R+ + H D + Sbjct: 98 AIQEFTTGRSFTCGDFQIHPFALSHDAAEPVGFLLRAGGRTLGHCTDLGV---------- 147 Query: 179 DKDSLCAIGNEGILALMCDSTN 200 L G AL+ + + Sbjct: 148 -VSRLVRHRLSGCQALVLECNH 168 >gi|332884345|gb|EGK04613.1| hypothetical protein HMPREF9456_00940 [Dysgonomonas mossii DSM 22836] Length = 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 40/216 (18%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 K I+IDCG F + + +E ++ + +TH H DH G L DL F Sbjct: 44 DKRILIDCGPDFREQIMY-------------EEFAHIHGVLLTHEHYDHVGGLDDLRPFC 90 Query: 92 ---HVPVYASPFAIGLLEAK----RVYERVS--KKIPCISFQAGDKVDVGAFSIESVRVN 142 V +Y++ + L+ + R +G I+ +++ Sbjct: 91 RFDDVDIYSNAITLDALKIRIPYSFREHRYPGVPTFRLHEVSHEASFSIGDIEIQPIKIM 150 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAM 202 H + + I + + D I + +K + + L+ S Sbjct: 151 HHMLPILGYRINNFA--------YLTDVKHIPEEEYNK-------LKDLDTLVISSLRIE 195 Query: 203 REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + IS + + + +I K + +T S + Sbjct: 196 KH---ISHLNLVEALEEIKKISPKKAYLTHMSHQMG 228 >gi|66817282|ref|XP_642494.1| DNA repair metallo-beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] gi|74861596|sp|Q86KS1|DCR1_DICDI RecName: Full=DNA cross-link repair 1 protein gi|60470572|gb|EAL68551.1| DNA repair metallo-beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] Length = 920 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 53/332 (15%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY + WSF + +Y + L+ K + + + +++ Sbjct: 287 FLTHFHSDHYVGITKTWSFGN--IYCTEETGKLVSHKL----GVDQRYIVKCEWNKLIEI 340 Query: 132 GAFSIESVRVNHSIPETMALVIRSP----------VGNIVHTGDWKLDDDAILGDVTDKD 181 + + NH P + ++ P +I+HTGD++ + + Sbjct: 341 QGVKVAFLDSNH-CPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPL---- 395 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS-VSRI 240 + I L D+T + + I K + I++ + F + + + Sbjct: 396 ----LKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKE 451 Query: 241 RSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 R +++IA+Q G+ + + S ++ + + ++ + V + Sbjct: 452 RILLEIAKQEGKPVHV---SNEKYAILCCLSTCLD-----INKFTTNELITPFRAVTMSM 503 Query: 301 SQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 +L S + R + N Sbjct: 504 LSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLN------------------RGP 545 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V S H N+L+ RP ++ Sbjct: 546 TTFYSVAYSEHSSFNELRDCIDHFRPTQIIPT 577 >gi|156937718|ref|YP_001435514.1| RNA-metabolising metallo-beta-lactamase [Ignicoccus hospitalis KIN4/I] gi|156566702|gb|ABU82107.1| RNA-metabolising metallo-beta-lactamase [Ignicoccus hospitalis KIN4/I] Length = 367 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 115/398 (28%), Gaps = 96/398 (24%) Query: 38 DCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 D GV PGVD V +THAH DH VYA Sbjct: 2 DAGV------EPGVDKVI-----------------LTHAHLDHSLMAP------GKEVYA 32 Query: 98 SPFAIGLLEAKRVYER-VSKKIPC------------ISFQAGDKVDVGAFSIESVRVNHS 144 + + L + + + ++ +P G VG ++ H Sbjct: 33 TLPTLALAKELWLDAKSLNPDLPWEATDVQKTLNSSFRVPYGRPFKVGDATVTLFNAGH- 91 Query: 145 IPETMALVIRSPVGNIVHTGD-----WKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 + + +++ +++TGD + LD + D L+ +S+ Sbjct: 92 VLGSAMVLVECEGKRLLYTGDLGTSSFLLDHWSKEVPQAD-------------VLVTESS 138 Query: 200 NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 ++ ++ + + + +G VL+ + V +++ +I +I L Sbjct: 139 YLCKDRPSAKKEWSRLLYFLKQRLREGPVLIAANA--VGKVQEVIKFLMNYKEQIGL--- 193 Query: 260 SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN 319 + +G + DE ++ G++ + S R Sbjct: 194 ----NAVIVEGMGFRA---TKIYDEMIEYLKESEVTAWLNGNRRRLTDFVTFPSSLRERL 246 Query: 320 VKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE-------------------- 359 V+ S ++ G +K V Sbjct: 247 DMARPGTAVVAPSGSLSGGMSVWWALKGVPYVLLGHVFEPASSLLAGGEVTLKDPLGNEG 306 Query: 360 ---DAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 E + +S H +L + + + + +HG+ Sbjct: 307 VVRPPELHLQISRHATRQELLQFISLTKAKEVYLVHGD 344 >gi|307596627|ref|YP_003902944.1| putative mRNA 3-end processing factor [Vulcanisaeta distributa DSM 14429] gi|307551828|gb|ADN51893.1| putative mRNA 3-end processing factor [Vulcanisaeta distributa DSM 14429] Length = 338 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 18/197 (9%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I + K + A+ ITH H DH + P+ S + ++ A R Sbjct: 23 IDPLRKPSRPFSAVLITHGHRDHV--NPRALRNVS-PIIMSGETVAIIRA-----RDGDY 74 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + I+ G ++ + IES H + +++ V+ + TGD+ ++ +L Sbjct: 75 LRHIAVSPGSRLIINDVLIESFNAGH-VVGSLSYVLDFGDLRVGVTGDFNVESSILL--- 130 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 D + L+ ++T + S I + I ++ + + Sbjct: 131 -DGAK-----GLNVDVLIMEATYGDPDYVFPSRHEIYNELMAIAEDGIRDGITVFMGQPL 184 Query: 238 SRIRSIIDIAEQIGRKI 254 R + + + + + Sbjct: 185 GRGQELTALLKDYPIYV 201 >gi|307720814|ref|YP_003891954.1| beta-lactamase domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978907|gb|ADN08942.1| beta-lactamase domain protein [Sulfurimonas autotrophica DSM 16294] Length = 197 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 19/168 (11%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + K +ID GV +++ N +AI TH H DH + Sbjct: 15 CYIATIDGKDFIIDPGVG--------------ATKWVLDNVTNPVAILNTHGHFDHVWSN 60 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 +L L + +Y + LL++ + IP ++ + +++D ++ Sbjct: 61 AELQEKLGIKLYTPKDDVFLLQSSEWMPDLPPSIPDVAVEGDEEIDFDGVKVKFTHFPGH 120 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD-----KDSLCAIG 187 + I + + + + + I Sbjct: 121 SRGCSTIEIGNAMFSGDFIFNRSIGRTDFPYSSPQDMKKSLQKFKQIP 168 >gi|309807782|ref|ZP_07701714.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 01V1-a] gi|312874739|ref|ZP_07734758.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2053A-b] gi|308168884|gb|EFO70970.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 01V1-a] gi|311089484|gb|EFQ47909.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2053A-b] Length = 265 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 26/178 (14%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 + L G G N L S +++D G+S K GVD+ Sbjct: 1 MRISILSSGSAG----NTTLIE----SEHHKVLLDAGLSGKKIANLLAQRGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 K++ +F++H H DH G L L + YA+ L+ ++ K+ Sbjct: 47 ------KDIDMVFLSHDHTDHSGGLGVLMRRYSQLNAYANEGTWKYLQESNKIGKIPKEQ 100 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I K+ + S +H E V S D ++ Sbjct: 101 INIFAPETTKI-FDDLEVHSFATSHDAAEPQYYVFCSGGKRFACLTDTGYVSSSVKMQ 157 >gi|218194787|gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indica Group] Length = 418 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 16/156 (10%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHYG L W H P+Y + L++ + + Sbjct: 167 AYFLSHFHHDHYGGLTKKW--CHGPIYCTALTARLVKMCLS----VNPEYICPLELDKEY 220 Query: 130 DVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + S+ + NH P + R +HTGD++ L + + Sbjct: 221 VIEGVSVTLLEANH-CPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPL--------LQR 271 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA 224 I L D+T + ++ + K Sbjct: 272 GQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRY 307 >gi|116628746|ref|YP_813918.1| beta-lactamase superfamily hydrolase [Lactobacillus gasseri ATCC 33323] gi|282852395|ref|ZP_06261737.1| metallo-beta-lactamase domain protein [Lactobacillus gasseri 224-1] gi|116094328|gb|ABJ59480.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri ATCC 33323] gi|282556137|gb|EFB61757.1| metallo-beta-lactamase domain protein [Lactobacillus gasseri 224-1] Length = 265 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKVSVLSSGSTG----NSTLIE----TPQHKILMDAGLSGKKTKELLAQVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKK 117 K++ +FI+H H DH G L L + YA+ L+E+ ++ Sbjct: 47 ------KDIDMVFISHDHTDHSGGLGVLMRRYPKISAYANSGTWNYLIESNKI--GKLPV 98 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +F++G G + S +H + V S D + G++ Sbjct: 99 EQINTFESGITKTFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEI 158 Query: 178 TD 179 D Sbjct: 159 RD 160 >gi|332531164|ref|ZP_08407077.1| cyclic-AMP phosphodiesterase [Hylemonella gracilis ATCC 19624] gi|332039271|gb|EGI75684.1| cyclic-AMP phosphodiesterase [Hylemonella gracilis ATCC 19624] Length = 281 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 49/160 (30%), Gaps = 36/160 (22%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ LG G I + + I++D G + Sbjct: 1 MKVRV--LGCSGAIARGSRTTSFLIDTD---ILVDAGTGVGDLT--------------VG 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERVSKK 117 E + +FITHAH DH AL + V V+A P I + A + Sbjct: 42 EMLRIDHVFITHAHLDHITALPLMLDAMGARRRQPVMVHALPQTIEAMRAHIFNNLIWPD 101 Query: 118 IPCISFQAGDKVDVGAF-----------SIESVRVNHSIP 146 I +A + IE++ H++P Sbjct: 102 FSRIPSEAAPFMRFAPIETGEVVEIGGRRIEALPAQHTVP 141 >gi|302878924|ref|YP_003847488.1| beta-lactamase domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581713|gb|ADL55724.1| beta-lactamase domain protein [Gallionella capsiferriformans ES-2] Length = 295 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 40/207 (19%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N + I++D G +FP ++K IF TH+H Sbjct: 23 GGNTTCIEI-RSDDNQLIILDGGTG-----------IFPLAQSLLKNLPVTAHIFNTHSH 70 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAK----------------------RVYERVS 115 DH L +P++ I L A+ + Sbjct: 71 WDHIQGLPFF-----IPIFIPGNTIKLYGARDPVTGDGPERIINVQLQYSFFPVREAEIQ 125 Query: 116 KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + +S + +G +I +NH + + I +I TGD + + Sbjct: 126 SRFEYVSLMPNTPLTLGDATITPTLLNHPVIN-LGYRIDCNGKSIFFTGDHEAHFNIYDL 184 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAM 202 + A+ +E LA++ Sbjct: 185 EDEGYAEYQALIDEQCLAIVNAVRGVD 211 >gi|227552544|ref|ZP_03982593.1| beta-lactamase superfamily I metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257888225|ref|ZP_05667878.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896887|ref|ZP_05676540.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|293378483|ref|ZP_06624646.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] gi|227178293|gb|EEI59265.1| beta-lactamase superfamily I metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257824279|gb|EEV51211.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257833452|gb|EEV59873.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|292642812|gb|EFF60959.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] Length = 269 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N S +K +++D G+S K + I + Sbjct: 9 KISILASGSSG----NSLYIE----SEKKRLLVDAGLSGKKITSL--------MAQIDRT 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L I +TH H DH + L H+ V+A+ +E F+ Sbjct: 53 PDQLDGILVTHEHRDHIHGVGVLARKYHLDVFANQQTWEAMEPLI---GNVPVEQKHLFE 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 G G IES V+H + V D + D + + D Sbjct: 110 MGKVRTFGDIDIESFGVSHDAAAPQFYRFHKENHSFVMLTDTGYCSDYMRGVIENADGYL 169 Query: 183 LCAIGNEGILAL 194 + + + +L + Sbjct: 170 MESNHDLEMLRM 181 >gi|330817628|ref|YP_004361333.1| hypothetical protein bgla_1g27620 [Burkholderia gladioli BSR3] gi|327370021|gb|AEA61377.1| hypothetical protein bgla_1g27620 [Burkholderia gladioli BSR3] Length = 258 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 30/167 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + S ++ +++DCG S + + + Sbjct: 1 MRFTSLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKE---------------LDRRL 43 Query: 66 KNL-------MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + AI ITH H DH G+ + +P++ S + A S + Sbjct: 44 TRVGLGSCELDAILITHEHSDHIGSALTVARRFGIPLFMSWGTAKAVGA------DSAAV 97 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + +G I V H E + V + D Sbjct: 98 DLHVLWGDETTPIGDLQILPYTVPHDAREPLQFVFSDGAARLGVLTD 144 >gi|119511400|ref|ZP_01630512.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414] gi|119463945|gb|EAW44870.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414] Length = 601 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 71/424 (16%), Positives = 136/424 (32%), Gaps = 53/424 (12%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 L G I++DCG+ L T + + + + ++HAH DH Sbjct: 84 CLLVRMGP----HRILLDCGLG-DGSSLL---------TSLAESQMPADVVLVSHAHPDH 129 Query: 81 YGALHDLWSFLH-VPVYASPFAIGLLEAK-RVYERVSKKIPCISFQAGDKVDV-GAFSIE 137 L DL +P+YAS LL + C + V++ +E Sbjct: 130 ARGLLDLHHTFPLLPIYASEVTSKLLPLNWLDQDPQKISQLCHALPLRSPVEIQEGLVVE 189 Query: 138 SVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 H +P +A+++ +++TGD+ L + ++ + L + + Sbjct: 190 LFPAGH-LPGAVAILLTYTTAERSYKLLYTGDFFLSNSRLVEGL----RLEELRGLELNV 244 Query: 194 LMCDSTNAMR--EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG 251 L+ + T E + + I + + + VL+ T + + + ++ + Sbjct: 245 LIIEGTYGTSRHPHRRHQENQLAERINRAIAD-RCSVLLPTPALGLGQELLMLLRSHHH- 302 Query: 252 RKIVLLGSSLKRVVSVAIDVGIIKKDQL--FLSDESFGLYPREQLIVIATGSQGEPRSAL 309 G L V A+ G +L L + L R + Sbjct: 303 ----FTGRDLDIWVDGAVATGCDAYLELLSHLPPSVQNFARHQPLF-----WDERVRPRV 353 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGN----EVAIGHI-----KNRLVEQGVRVIAED 360 +L + E R V+ S A E I + V + Sbjct: 354 RRL-QAEHRATVGKSPCIVLTDSTANLNQYCQKETGPWLILLPEKIDIKVNKKYLATT-- 410 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 + ++ H ++ +RPQ +V +HG P +L L + V G Sbjct: 411 TDESYLLAQHSDGPGTTQLIHNLRPQHVVFVHGSPAYLADLTSLEELQNRYHVHSPAAGT 470 Query: 421 MLRL 424 + L Sbjct: 471 FVEL 474 >gi|148252379|ref|YP_001236964.1| hypothetical protein BBta_0796 [Bradyrhizobium sp. BTAi1] gi|146404552|gb|ABQ33058.1| hypothetical protein BBta_0796 [Bradyrhizobium sp. BTAi1] Length = 244 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 61/198 (30%), Gaps = 37/198 (18%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +L F+ G G G G + + S+ ++IDCG S P P + Sbjct: 1 MQLRFVGCGDAFGSG--GRSNTCFHLTGISTN--LLIDCGASSP-----------PALKR 45 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPV------YASPFAIGLLEAK 108 + ++ I ITH H DH+ L L V A+ ++EA Sbjct: 46 LGIACNDVSLILITHFHGDHFAGLPFLLLDAQFSKRTQPLVIAGPAGIATRLT-QVMEAL 104 Query: 109 RVYERVSKKIPC---ISFQAGDKVDVGAFSIESVRVNHSIPETM--ALVIRSPVGNIVHT 163 + + + I G + V H I + I +T Sbjct: 105 FEHSSSTPRTFELAVIELAPECTTRFGDIGVTPFAVVHGGSGGPFLGYRIAAEGRVIAYT 164 Query: 164 GDWKL-DDDAILGDVTDK 180 D + D LG D Sbjct: 165 ADTEWTDSLIPLGRDADL 182 >gi|207108758|ref|ZP_03242920.1| hypothetical protein HpylH_04839 [Helicobacter pylori HPKX_438_CA4C1] Length = 175 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%) Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS-- 115 ++++ KN AI ITH H DH L L P+YA + +LE + + Sbjct: 4 EWVLENAKNPKAILITHGHYDHVWDSAQLSKTLKDTPIYAPKDDVFMLENDIFHLGMPVF 63 Query: 116 -KKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--A 172 + +++ +I+ P + I ++ +GD+ Sbjct: 64 SPNFSVPCNKGCTTLEIANTTIKYWHFPGHTPGCSIIEIEG----VIFSGDFIFYRSIGR 119 Query: 173 ILGDVTDKDSLCA 185 +++ + Sbjct: 120 YDFPYSNEKDMKE 132 >gi|117918991|ref|YP_868183.1| aspartate kinase [Shewanella sp. ANA-3] gi|117611323|gb|ABK46777.1| Aspartate kinase [Shewanella sp. ANA-3] Length = 480 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 70/462 (15%), Positives = 137/462 (29%), Gaps = 107/462 (23%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG E+ + L + K +++DCG+ + + + A Sbjct: 8 LGATEEVTGSCHLL----TVAGKQMLLDCGLIQGGKADELRNHEPFSFDPLA-----ISA 58 Query: 71 IFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY---------ERVSKKIPC 120 + ++HAH DH G L L P++ L ER +KK Sbjct: 59 VVLSHAHIDHSGRLPLLVKAGYTGPIFTHKATAELCAIMLKDAAMLQVRDTERTNKKRAK 118 Query: 121 ISFQAGDKVD-----------------------VGAFSIESVRVNHSIPETMALVIR--- 154 + + + I H I + + + Sbjct: 119 HELDPLEPLFTVEDAEQAITQFVSLEYGQVTRVIPHVDICLSDAGH-ILGSALVELWLGE 177 Query: 155 -SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--K 211 +V +GD IL + T D+ ++ +ST R ++ Sbjct: 178 GKAQKKLVFSGDLGRAGMPILRNPTLVDT--------ADLVLMESTYGNRFHRSWTDTLA 229 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRK--------IVLLGSSLKR 263 +K + + G +L+ FS V R + ++ + ++ + +++ Sbjct: 230 ELKAIFAKAVTESHGNILLPAFS--VGRAQELLYLFHLYAKEWDLSRWKVCLDSPMAIEA 287 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYP-------------------REQLIVIATGS--- 301 + ++ D + + G +P + ++I GS Sbjct: 288 TRVYVNNYPLMDDDFKRFTRQHPGQHPLLSNVEFIQTTEESIALNDVHKGLIIIAGSGMC 347 Query: 302 -QGEPRSALAQLSRGEMRNVKLAEKD-TVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 G RS L E + + + PG + + + E + + Sbjct: 348 NGGRIRSHL------EHNLWRPECDVIICGYQALGTPG-----RALVDGVEELTIHGNSI 396 Query: 360 DAECPVHV----SGHPYPNDLKRMYQWIRPQ-VLVAIHGEPL 396 +H S H +L R Y+ Q LV +HGEP Sbjct: 397 KVAAKLHTVGGLSAHADQAELLRWYRHFESQPPLVLVHGEPE 438 >gi|227484950|ref|ZP_03915266.1| possible hydroxyacylglutathione hydrolase [Anaerococcus lactolyticus ATCC 51172] gi|227237105|gb|EEI87120.1| possible hydroxyacylglutathione hydrolase [Anaerococcus lactolyticus ATCC 51172] Length = 200 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 13/168 (7%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + K ++DC +P L FI + + I +TH H DH L Sbjct: 15 SYLVHENGKGFIVDC--PYPSSAL---------DKFIEDNKIKIEFIILTHTHFDHVTGL 63 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVY--ERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 +V VYAS + + E +S I D ++I++++ Sbjct: 64 KYYKDKFNVDVYASEDSKEVAENPNFNLAYHISNLEVPIDHYLKDGEVFSKYNIKAIKTP 123 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++M+ ++ + + G D+ I G Sbjct: 124 GHTIDSMSYILGDVIFTGDTLFRLSVGRTDFPGGSFDEIKDSIINKLG 171 >gi|242309649|ref|ZP_04808804.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523650|gb|EEQ63516.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 232 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 39/189 (20%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L S + ++ID G+ ++++ KN +AI TH H D Sbjct: 22 NCYLV--LSKEKEESLIIDPGIGAS--------------QWVLENAKNPLAILNTHGHFD 65 Query: 80 HYGALHDLWSFLH-----VPV----------YASPFAIG----LLEAKRVYERVSKKIPC 120 H + +L L P+ + + L+ AK + Sbjct: 66 HVWSNAELKEKLPNTPLLCPLEDAFMLKSDCFGTGLTESKADILVGAKADESPIESTANT 125 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWKLDDD--AILGD 176 + + + G F ++ V P ++I + +GD+ Sbjct: 126 ANLKRENNYYFGDFEVKFVCYPGHTPGCSVIIISHKKSKQKTMFSGDFIFYRSIGRSDFP 185 Query: 177 VTDKDSLCA 185 +D +++ A Sbjct: 186 YSDSETMKA 194 >gi|170290131|ref|YP_001736947.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174211|gb|ACB07264.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 217 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 L + + ++ID G P D+V I + L AI ITH H DH Sbjct: 32 CYLIENKAEKNS--LLIDAGC-------PAEDIV----RLIEERGLKLEAILITHTHFDH 78 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISFQAGDKVDVGAFSIESV 139 L ++ + A P + +L + +I I G ++ +G S ++ Sbjct: 79 LLGLGEIVRATNCRALAHPMDLEMLPLYWKEDFGTLPRIEPIE--DGMRIKLGELSFLAI 136 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGD 165 P + S V TGD Sbjct: 137 HTPGHTPGSTCYY--SSEIGSVFTGD 160 >gi|253577655|ref|ZP_04854963.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842947|gb|EES70987.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 236 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 18/96 (18%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ LG + N L + I+ID G PG + I + Sbjct: 31 KIESFSLGPLQ---TNAYLLR--GEDENRAIIIDPG------SNPG--PLLRRIEGLE-- 75 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF 100 + AI +THAH DH G L + + PVY P Sbjct: 76 ---IEAILLTHAHFDHIGGLDQIRKAKNCPVYVHPL 108 >gi|30263065|ref|NP_845442.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47528408|ref|YP_019757.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|30257698|gb|AAP26928.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47503556|gb|AAT32232.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] Length = 281 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 41 GNPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + + +D+G SI+ Sbjct: 92 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 150 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 151 VLPTDGTVPHVPGFRWIHTPGHTPGHISLFR 181 >gi|307108579|gb|EFN56819.1| hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis] Length = 520 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 23/196 (11%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 A F+TH H DH L P+Y SP LL + + I Sbjct: 29 RAFFLTHMHSDHTTG---LSRSFSAGPIYCSPITARLLR---CDMGIRPDLIRILPLDLP 82 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 G + + NH P + + R+P I+HTGD + A+ Sbjct: 83 TTICG-VEVVPIDANH-CPGAVMFLFRAP-TTILHTGDVRWQAGMAQH--------AALT 131 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNI-----YDIMKNAKGCVLVTTFSSSVSRIRS 242 + LM D+T + R+ T ++ + + + + G VL S + + R+ Sbjct: 132 GRQVDVLMLDTTYSQRKWTFPPQEEVVELMVQAMAREAAAGPPGAVLFVVGSYHIGKERA 191 Query: 243 IIDIAEQIGRKIVLLG 258 + +G ++ Sbjct: 192 YLGAGAALGWRVHCSP 207 >gi|320094144|ref|ZP_08025957.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978946|gb|EFW10476.1| metallo-beta-lactamase [Actinomyces sp. oral taxon 178 str. F0338] Length = 470 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 77/267 (28%), Gaps = 55/267 (20%) Query: 11 LGGVGEIGMNMALYGYGSPSSR--------KWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 LGG + + L P + I++DCG+ F L + Sbjct: 8 LGGARTVTGSKYLLSIDPPGGAPDRPGAGPRRILVDCGL-FQGMK----KLRRANWAPFP 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------- 110 + ++ + +THAH DH G L L ++ + L E Sbjct: 63 VDPASIDDVLLTHAHMDHTGYLPRLVKHGFRGSIWGTDATQALTEIVLRDSAYLQERDAD 122 Query: 111 ---YERVSKK----------------IPCISFQAGDKVDVGA-FSIESVRVNHSIPETMA 150 S+ S + +D+G R H I + + Sbjct: 123 FANEHGFSRHEKALPLYRIGDVAKTLPLMRSVEFHRPLDLGDGIEATWHRAGH-ILGSAS 181 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG-TCIS 209 + + +P G+++ +GD T G + +ST RE S Sbjct: 182 IRVATPDGSVLFSGDLG--------RTTHPVLRSREIPPGADVALIESTYGDREHIEPAS 233 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + G VLV F+ Sbjct: 234 PHEAFAAAIRRTVSLGGSVLVPAFAVD 260 >gi|330996961|ref|ZP_08320826.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329572035|gb|EGG53706.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 255 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 88/280 (31%), Gaps = 60/280 (21%) Query: 6 LVFLPLG-----GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSFPKDDL 48 + LG GV +IG + + + + I++DCG P Sbjct: 1 MKITFLGTGTSTGVPQIGCSCKVCRSTDARDKRLRTSVLVETEQTRILLDCG---PDFRQ 57 Query: 49 PGVDLVFP-DITFIMKERKNLMAIFITHAHEDHYGALHDLWS---FLHVPVYASPFAIGL 104 + P D + A+ +TH H DH G + DL F V +YAS G Sbjct: 58 ----QILPLDFR-------RIDAVLLTHEHYDHVGGIDDLRPFGVFGDVQLYASERTGGQ 106 Query: 105 LEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 L ++ + + + VG + + V H ++ VG Sbjct: 107 LRQSLPYCFVEHKYPGVPQLRLHAVRPHEAFRVGELQVTPIEVMH----ARLPILGYRVG 162 Query: 159 NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + + +TD ++ + + L N +R S + I++ Sbjct: 163 RMAY--------------ITDMKTIADCELDYLQGLELLVLNGLRHEPHYSHQTIEEACA 208 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + + + ++ D + G ++ G Sbjct: 209 FARRLRVPRTYLIHMGHHID-LHAVEDASLPEGVRMAYDG 247 >gi|74188762|dbj|BAE28111.1| unnamed protein product [Mus musculus] Length = 412 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 117/362 (32%), Gaps = 68/362 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L L+ DS NA ++ ++ + ++ Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSR-----PSLLITDSFNATYVQPRRKQRD-EQLLTNV 223 Query: 221 MK--NAKGCVLVTTFSS----SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 ++ G VL+ ++ ++++ I + G + + ++ Sbjct: 224 LETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALL 269 Query: 275 KKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + S ++L+ + P + ++ V+ +S Sbjct: 270 NNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLAS 329 Query: 333 RA 334 + Sbjct: 330 QP 331 >gi|95930093|ref|ZP_01312832.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95133787|gb|EAT15447.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 258 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 17/142 (11%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 S + I+ID G+S + + I + +L A+F+TH H DH L L Sbjct: 17 IESEKTRILIDAGLS--------ALQISCRLEQIGVDADSLDAVFVTHEHSDHCRGLGPL 68 Query: 88 WSFLHVPVYASPFA-IGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 +P++ P +++ +V ER F G+ V I+ + H Sbjct: 69 SRRHKLPIFFHPDTHAAIVKLGKVEERF--------FDIGETVVFQDVLIQPFPITHDAA 120 Query: 147 ETMALVIRSPVGNIVHTGDWKL 168 + V+ + G I D + Sbjct: 121 APVGFVVDTCDGKIGVATDMGI 142 >gi|154175388|ref|YP_001408056.1| thioredoxin reductase [Campylobacter curvus 525.92] gi|112802864|gb|EAU00208.1| thioredoxin reductase (trxr) (general stress protein 35)(Gsp35) [Campylobacter curvus 525.92] Length = 200 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%) Query: 48 LPGVDLVFPDI-----TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAI 102 PG D+V D ++ + K+ AI TH H DH + L L +PVY + Sbjct: 20 TPGGDIVI-DPGEGAKEWVKQNAKDAKAILCTHGHFDHIFDVKALKDELGLPVYINENDA 78 Query: 103 GLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVH 162 ++++ ++ +G S+ + P + I + Sbjct: 79 FMVQSDVFGYGYECFTADALISGDKEIMIGDMSVRFYLFSGHTPGCSMIQIGEA----MF 134 Query: 163 TGDWKLDDD---AILGDVTDKDSLCAIGNEGIL 192 +GD+ D + +D + ++ L Sbjct: 135 SGDFLFKDSIGRWDFPYSSKEDMIKSLEKCKNL 167 >gi|121593426|ref|YP_985322.1| beta-lactamase domain-containing protein [Acidovorax sp. JS42] gi|120605506|gb|ABM41246.1| beta-lactamase domain protein [Acidovorax sp. JS42] Length = 260 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 14/147 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L S + + +++DCG+ G+ + + L A+FITH H Sbjct: 13 GNATLVEGRSGAHTRRLLVDCGL--------GIRQLQWRLEAAGTAPAQLDAVFITHEHS 64 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH G + L +PV+ S L A G VD+G+F Sbjct: 65 DHVGCVLKLALRERIPVWMSEGTYDALGA------PDLDGLLHVACDGVPVDMGSFCAHP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 V H E + L +I D Sbjct: 119 FSVPHDAREPLHLRCSDGATHIGLLTD 145 >gi|114567275|ref|YP_754429.1| Zn-dependent hydrolase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338210|gb|ABI69058.1| Zn-dependent hydrolase including glyoxylases [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 229 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 61/211 (28%), Gaps = 18/211 (8%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +ID G + +++ I +L I +TH H DH G L Sbjct: 28 YLIDGGGESALIDAGAG-RSASMIWSNIIATGID-----VSSLKHIVVTHGHIDHIGGLA 81 Query: 86 DLWSFLHVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQ---AGDKVDVGAFSI 136 L L V A + +E + V+ + + ++ +G + Sbjct: 82 FLKEKLQAQVIAHSLELPAIEEGLPQLTAASWYGVTYEKVKVEQVLKGEEQRLKLGQVEL 141 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 P ++ + ++ D +D I + +L L Sbjct: 142 ICPHTPGHTPGGISPYVDITGKRVLFGQDIH--GPFNQQWGSDLKEW-RISMQKLLELEA 198 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D G ++K I ++ Sbjct: 199 DILCEGHFGIYSPAAAVRKYIEGYLRQYSRK 229 >gi|326330806|ref|ZP_08197107.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Nocardioidaceae bacterium Broad-1] gi|325951336|gb|EGD43375.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Nocardioidaceae bacterium Broad-1] Length = 256 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 25/208 (12%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + L R W I++D G + GV + D + A+ ++H H Sbjct: 24 SCYLVEADDSEGRTWRIVLDMG-----NGALGVLQRYVDPLL-------IDAVLLSHLHA 71 Query: 79 DHYGAL--HDLWSFLH-------VPVYASPFA-IGLLEAKRVYERVSKKIPCISFQAGDK 128 DH + + + H +PVY L +A + +R + Sbjct: 72 DHCVDMTSYYVLRKWHPTGPQPPIPVYGPKGTGRRLAKAYDLPKRPGMREEFAFSTYTGP 131 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDKDSLCAIG 187 + +G F I V H + + L I + I ++GD + + D A Sbjct: 132 IHLGPFVITPTAVEHPV-DAYGLRIEAHGKVIAYSGDTAETEALLDIATEADLFLCEAAF 190 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKK 215 +G+ + G ++ +KK Sbjct: 191 RDGVENPPGVHITGVHAGEYATKAHVKK 218 >gi|297828291|ref|XP_002882028.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327867|gb|EFH58287.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 721 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 105/324 (32%), Gaps = 43/324 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K G KV++ Sbjct: 417 FLTHFHLDHYQGLT--KSFSHGKIYCSLVTAKLVNMKI----GIPWERLQVLDLGQKVNI 470 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + NH P ++ ++ + ++HTGD++ ++ + Sbjct: 471 AGIDVTCFDANH-CPGSIMILFEPTNGKAVLHTGDFRYSEEMSDW----------LIGSQ 519 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I +L+ D+T + E I+ + I A K L+ +++ R+ + Sbjct: 520 INSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVAR 579 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + +++ + +++ D + E+ + P Sbjct: 580 VLR------------EKIYINPSKLKLLECLGFSKEDMQWFTVKEEESHIHVV-----PL 622 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 LA R + + + ++I + G + + V Sbjct: 623 WTLASFKRLKHIANRYTNRYSLIVTFSPT-GWTSSKTK---KKSPGRRLQQGTIIRYEVP 678 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVA 390 S H +LK Q P+V++ Sbjct: 679 YSEHSSFTELKEFVQKASPEVIIP 702 >gi|298492287|ref|YP_003722464.1| beta-lactamase domain-containing protein ['Nostoc azollae' 0708] gi|298234205|gb|ADI65341.1| beta-lactamase domain protein ['Nostoc azollae' 0708] Length = 571 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 62/432 (14%), Positives = 131/432 (30%), Gaps = 55/432 (12%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---NLMAIFITHAH 77 L G I++DCG++ L G IT + + + I+HAH Sbjct: 35 CLLVRMGP----HRILLDCGLA-DISSLYG------GITTSVHRGNLPPPVDLVLISHAH 83 Query: 78 EDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSK-KIPCISFQAGDKVDV-GAF 134 DH L L +P+YAS LL + C + V++ Sbjct: 84 ADHARGLLSLNQAFPMLPIYASEVTSKLLPLNWPEQDPEDIPAFCHALPLRSPVEIQENL 143 Query: 135 SIESVRVNHSIPETMA----LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 +E H +P +A ++ +++TGD+ L + ++ + L + Sbjct: 144 IVELFPAGH-LPGAVAILLTYHTQNRDYKLLYTGDFFLSNSRLVEGL----RLEELRGLN 198 Query: 191 ILALMCDSTNAMR--EGTCISEKGIKKNIYDIM-----KNAKGCVLVTTFSSSVSRIRSI 243 + L+ + + E + + I + + V + ++ + + Sbjct: 199 LNVLLIEGSYGTSRHPHRRNQENQLAERINRAITTGAPEMNADHCSVILPTPALGLGQEL 258 Query: 244 IDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDESFGLYPREQLIVIATG 300 + + G L V A+ G ++ + + Sbjct: 259 LMLLRSHH---HFTGRDLDIWVDGAVATGCDAYLELLPHLPASVQNFARHQPLFW----- 310 Query: 301 SQGEPRSALAQLSRGEMRNVKLAE-------KDTVIFSSRAIPGNEVAIGHI-KNRLVEQ 352 R + +L ++ + + R G + + + V Q Sbjct: 311 -DERVRPRVRRLKAEDLATLGSTPCIVLTDSTADLSKYCRPNTGPWLILLPEKIDIKVNQ 369 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIAC 412 + + H ++ +RPQ +V +HG P +L L + Sbjct: 370 EYLAPTTFESYLL--AQHSDGPGTTQLIHNLRPQHVVFVHGSPAYLADLTSLEELQNRYH 427 Query: 413 VPPVRNGKMLRL 424 + G ++ L Sbjct: 428 IHSPAAGILVEL 439 >gi|222110136|ref|YP_002552400.1| beta-lactamase domain-containing protein [Acidovorax ebreus TPSY] gi|221729580|gb|ACM32400.1| beta-lactamase domain protein [Acidovorax ebreus TPSY] Length = 260 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 14/147 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N L S + + +++DCG+ G+ + + L A+FITH H Sbjct: 13 GNATLVEGRSGAHTRRLLVDCGL--------GIRQLQWRLEAAGTAPAQLDAVFITHEHS 64 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH G + L +PV+ S L A G VD+G+F Sbjct: 65 DHVGCVLKLALRERIPVWMSEGTYDALGA------PDLDGLLHVACDGVPVDMGSFCAHP 118 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 V H E + L +I D Sbjct: 119 FSVPHDAREPLHLRCSDGATHIGLLTD 145 >gi|254173232|ref|ZP_04879905.1| ATP-binding protein phnp [Thermococcus sp. AM4] gi|214032641|gb|EEB73470.1| ATP-binding protein phnp [Thermococcus sp. AM4] Length = 255 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 17/187 (9%) Query: 56 PDITFIMKERKN-LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE--AKRV-- 110 PD+ + ++ + + ITH H DH L +L F + Y+ A+ + + A+ Sbjct: 51 PDLHYHLERLNREVEQVLITHGHFDHVFGLPELQVFKRISFYSHREALEVAKSLARLAFG 110 Query: 111 -YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + + ++ +G + V H++ VI I TGD Sbjct: 111 SESPEGHEWAYNELEFWEETRIGKMRVVHFPVTHTVT-AGGFVIEVKGKRIAITGDTGP- 168 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 KD +G L+ + T+ RE S G+++ I + G + Sbjct: 169 -------EILKDEKAIKLMKGADLLIAEMTH--REAIPGSHLGVREAIELAKRVGAGYTV 219 Query: 230 VTTFSSS 236 S S Sbjct: 220 FAHISHS 226 >gi|167770103|ref|ZP_02442156.1| hypothetical protein ANACOL_01446 [Anaerotruncus colihominis DSM 17241] gi|167667735|gb|EDS11865.1| hypothetical protein ANACOL_01446 [Anaerotruncus colihominis DSM 17241] Length = 544 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 71/470 (15%), Positives = 138/470 (29%), Gaps = 105/470 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSF-PKDDLPGVDLVFPDITFIMKERKNLM 69 LG E+ + + + K I+IDCG+ P + + P + Sbjct: 16 LGAAHEVTGSC----HYLQACGKKILIDCGMQQGPDEYEHQEMPLAP---------GEVD 62 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------------------EAK 108 + +THAH DH G L L H + A+ L + K Sbjct: 63 FVLLTHAHIDHSGRLPLLAKNGFHGTICATDATCDLCGIMLRDSAHIQEFEAEWKNRKGK 122 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAF------------SIESVRVNHSIPETMALVIRSP 156 R + + + + F ++ V V H + + ++ + Sbjct: 123 RAGRDPIEPLYTVDDAETAIGLLSPFVYNQVEQLCDGIAVRFVDVGH-LLGSASIEVWVT 181 Query: 157 VG----NIVHTGDWKLDDDAI---LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 IV +GD + + +TD ++ +ST R Sbjct: 182 EDGNTTKIVFSGDIGNLNQPLLRDPAYITD-----------ADYIVVESTYGNRLHEPPP 230 Query: 210 EKGI-KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 + I I + G V++ +F+ V R + ++ I + ++ G V Sbjct: 231 DYSINLAQIIQRTFDRGGNVVIPSFA--VGRTQEMLYFLRDIKARGLVHGHD---NFPVY 285 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVKLAEKDT 327 +D + + + + E + ++ G L ++ E R + Sbjct: 286 VDSPLAIEATTIFQENRVDCFDDEAMELVKHGINPITFLGLELSVTSEESRAINFDNTPK 345 Query: 328 VIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA----------------------------- 358 VI S+ + H+K+ L + V+ Sbjct: 346 VIISASGMCDAGRIKHHLKHNLWRRDSTVVFVGYQAVGTLGRSLLEGAKSVKLFGETIEV 405 Query: 359 -EDAECPVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELA 405 + VSGH L R + P+ + +HGE + Sbjct: 406 EAEITSLQGVSGHADQAGLLRWLDAFQTPPRRIFVVHGESSVCEEFAGIV 455 >gi|134298573|ref|YP_001112069.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051273|gb|ABO49244.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 525 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 65/508 (12%), Positives = 133/508 (26%), Gaps = 113/508 (22%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN--- 67 LG + + L G+ +++DCG+ + I + Sbjct: 6 LGAAQTVTGSCFLVEAGATR----LLVDCGLFQGSKE-------------IKERNYRNFP 48 Query: 68 -----LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR---------VYE 112 + I +THAH DH G L V A+ + L E E Sbjct: 49 LAPSSVDFILLTHAHIDHSGLLPKFIKQGFKGKVIATSATVDLCEILLPDCGHIQEMEVE 108 Query: 113 RVSKKIPCISFQAGDKVDVG-----------------------AFSIESVRVNHSIPETM 149 R ++K + + + + H I + Sbjct: 109 RKNRKYRRQGRKLIEPIYTAEDGERALNYFERANYNEIITISSDIRVCFRDAGH-ILGSS 167 Query: 150 ALVIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + +V +GD + + D + ++ +ST R Sbjct: 168 MIEMWVKENGKETKLVFSGDIG---NTNQPFIKDPSFIVD-----ADYVIMESTYGNRVH 219 Query: 206 TCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIG-------RKIVLL 257 K + + + G +++ F++ R + I+ ++ I + Sbjct: 220 QDSDNKLELLQRAIKDTYHRGGKLIIPAFAA--GRTQDILYSINKLHVQRAIPEMPIYID 277 Query: 258 GSSLKRVVSVAIDVGIIKKDQLFLSDESFGL---YPREQLIVIATGSQGEPR-------- 306 R + + + + P + + S+ Sbjct: 278 SPMAIRATEIFRNNSQLYDRETRELIAQGHNPLEMPNIKTSLTVEESRELNFFKGRAIII 337 Query: 307 --SALAQLSRGEM--RNVKLAEKDTVIFSSRAIPGN--------EVAIGHIKNRLVEQGV 354 S + R + R+ + V+F G E A+ I + Sbjct: 338 SASGMCDAGRIKHHLRHNLWRPECMVLFVGYQAEGTLGRRILSGEKAV-RIHGEEIVVKA 396 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRP--QVLVAIHGEPLHLVAHKELALQEGIAC 412 + D S H L + P + + +HGE L G Sbjct: 397 DIRHIDG-----YSAHADQPALLNWVKQFSPELKKVFVVHGEAKAADNLAALIRD-GGTE 450 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLF 440 + + L P + + EV+ + Sbjct: 451 TYVPGWLEKVELTPGEQKQVPEVLVQTW 478 >gi|256420462|ref|YP_003121115.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256035370|gb|ACU58914.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 467 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 70/474 (14%), Positives = 131/474 (27%), Gaps = 116/474 (24%) Query: 30 SSRKWIMIDCGV-------SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 ++ K I++DCG+ + ++ G D ++ + ++HAH DH G Sbjct: 22 TNGKRILLDCGMFQGMGRETDAMNEEFGFD------------AASVTHVILSHAHIDHSG 69 Query: 83 ALHDLWSF-LHVPVYASPFAIGLLE------------------AKRVYERVSKKIPCISF 123 + L +Y +P L E K E + P + Sbjct: 70 LIPLLVKRGFKGTIYCTPATKDLTEILLLDSAKIQEDDTKFTNKKLRKEGKPEITPLYTI 129 Query: 124 Q-------------AGDKVDV-GAFSIESVRVNHSIPETMALVIRSPVG----NIVHTGD 165 V + H I + A+ +R I +GD Sbjct: 130 DDAKKSINALKKVNYNTWFQVDDNVEVYFTDAGH-IIGSAAVHLRITENGKTTQITFSGD 188 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG--IKKNIYDIMKN 223 +DAIL D ++ +ST + + K I+D K Sbjct: 189 IGRYNDAIL-RSPDV-------FPQADYILMESTYGSTLHAEAAPSDDLLIKYIHDTCKV 240 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 KG +++ FS V R + ++ + L + ++ + Sbjct: 241 KKGKLIIPAFS--VGRTQELLYALNRAELDGKLP-------KVDIFVDSPLSREATDVVR 291 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKLAEKDTVIFSSRAIPGNEVA- 341 + + ++ L +S E + + E VI S+ G A Sbjct: 292 HHPETFNKTVKKLLERDDDPFDFPGLHYISTVDESKALNFREAPCVIISAS---GMAEAG 348 Query: 342 -----IGHIKNRLVEQGVRVIAEDAECP---------------------------VHVSG 369 I + N + V + + +S Sbjct: 349 RVKHHIANNINDSRNTILIVGYCEPQSLGGRLMRGAKEVSIYGTRYEVRADVGVIRSMSA 408 Query: 370 HPYPNDLKRMYQWIRP---QVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 H DL + P + L +HGE + L++G + Sbjct: 409 HGDYEDLSQWLSCQDPREVKKLFLVHGEYEVQTIFRNWLLKKGFQDIEIPERHS 462 >gi|119383829|ref|YP_914885.1| beta-lactamase domain-containing protein [Paracoccus denitrificans PD1222] gi|119373596|gb|ABL69189.1| beta-lactamase domain protein [Paracoccus denitrificans PD1222] Length = 372 Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 17/94 (18%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 G+G G + A + + + I++D G + PG PD+ I + Sbjct: 5 TAFSGLG--GKSPAAF--LLEIAGRRILMDLG----EGPTPG---QRPDLDGI----GRV 49 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVP-VYASPFA 101 AIF++HAH DH GA+ DLW L P V+AS Sbjct: 50 DAIFLSHAHIDHVGAI-DLWPRLGCPSVFASRTT 82 >gi|291460326|ref|ZP_06599716.1| metallo-beta-lactamase family protein YycJ [Oribacterium sp. oral taxon 078 str. F0262] gi|291417081|gb|EFE90800.1| metallo-beta-lactamase family protein YycJ [Oribacterium sp. oral taxon 078 str. F0262] Length = 265 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG--LLEAKRVYERVSKKIPCISFQ 124 ++ IF+TH H DH A+ + +P+Y + + LL + Sbjct: 48 DINGIFLTHEHIDHIRAVGTISRRYGIPIYGTLATLRETLLSKSL---GDFDRGLLHPIL 104 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + + I ++H + +A +RS T D DD I G + D D+ Sbjct: 105 PDQSIRIASLEILPFSIDHDAADPVAYRVRSGEKCAAVTTDLGHFDDYICGHLRDLDA 162 >gi|289550684|ref|YP_003471588.1| Hydroxyacylglutathione hydrolase [Staphylococcus lugdunensis HKU09-01] gi|315658179|ref|ZP_07911051.1| metallo-beta-lactamase [Staphylococcus lugdunensis M23590] gi|289180216|gb|ADC87461.1| Hydroxyacylglutathione hydrolase [Staphylococcus lugdunensis HKU09-01] gi|315496508|gb|EFU84831.1| metallo-beta-lactamase [Staphylococcus lugdunensis M23590] Length = 207 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 24/179 (13%) Query: 26 YGSPSSRKWIMID-CGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + I+ D G VD + + + K L A+ +THAH DH GAL Sbjct: 16 YFVENDHSVILFDPAG---------EVDKI---FKKLNQINKPLQAVLLTHAHFDHIGAL 63 Query: 85 HDLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAGD--KVDVGAFS 135 ++ + VP+Y + L K + + + ++ F Sbjct: 64 DEVLAKYPVPLYMNDEEFSFLTTPEKNGSEKFQQYGMPIVVSTAKPKPLQEGHANIQGFE 123 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILAL 194 + + P +++ V + + D ++L + + L Sbjct: 124 FDVLHTPGHSPGSLSYVFNDFAIVGDTLFNNGIGRT--DLYRGDYETLVDSIKDKLFEL 180 >gi|282876029|ref|ZP_06284896.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|281295054|gb|EFA87581.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] Length = 161 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + I+ID P + + I + + K L AI +THAH DH GAL Sbjct: 16 YFIENEENVILID-----PSSESQKI------IKKLNQINKPLKAILLTHAHYDHIGALD 64 Query: 86 DLWSFLHVPVYASP 99 ++ VPVY S Sbjct: 65 NIIEKYQVPVYMSK 78 >gi|69247568|ref|ZP_00604402.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257880372|ref|ZP_05660025.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882233|ref|ZP_05661886.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257891030|ref|ZP_05670683.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|260562327|ref|ZP_05832841.1| metallo-beta-lactamase YycJ [Enterococcus faecium C68] gi|261208374|ref|ZP_05923024.1| metallo-beta-lactamase YycJ [Enterococcus faecium TC 6] gi|289566833|ref|ZP_06447243.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Enterococcus faecium D344SRF] gi|293553008|ref|ZP_06673653.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1039] gi|293559837|ref|ZP_06676352.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1162] gi|293567709|ref|ZP_06679052.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1071] gi|293570845|ref|ZP_06681892.1| metallo-beta-lactamase YycJ [Enterococcus faecium E980] gi|294616681|ref|ZP_06696451.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1636] gi|294619186|ref|ZP_06698672.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1679] gi|294623106|ref|ZP_06701992.1| metallo-beta-lactamase YycJ [Enterococcus faecium U0317] gi|314939993|ref|ZP_07847188.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|314943536|ref|ZP_07850301.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|314948946|ref|ZP_07852313.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] gi|314950765|ref|ZP_07853841.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|314994101|ref|ZP_07859418.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|314998032|ref|ZP_07862924.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|68194792|gb|EAN09269.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257814600|gb|EEV43358.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257817891|gb|EEV45219.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257827390|gb|EEV54016.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|260073251|gb|EEW61592.1| metallo-beta-lactamase YycJ [Enterococcus faecium C68] gi|260077435|gb|EEW65154.1| metallo-beta-lactamase YycJ [Enterococcus faecium TC 6] gi|289161364|gb|EFD09254.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Enterococcus faecium D344SRF] gi|291589644|gb|EFF21449.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1071] gi|291590435|gb|EFF22174.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1636] gi|291594568|gb|EFF25959.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1679] gi|291597475|gb|EFF28640.1| metallo-beta-lactamase YycJ [Enterococcus faecium U0317] gi|291602814|gb|EFF33021.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1039] gi|291606201|gb|EFF35620.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1162] gi|291609113|gb|EFF38388.1| metallo-beta-lactamase YycJ [Enterococcus faecium E980] gi|313587962|gb|EFR66807.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|313591468|gb|EFR70313.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|313597045|gb|EFR75890.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|313597774|gb|EFR76619.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|313640763|gb|EFS05343.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|313644645|gb|EFS09225.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] Length = 269 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N S +K +++D G+S K + I + Sbjct: 9 KISILASGSSG----NSLYIE----SEKKRLLVDAGLSGKKITSL--------MAQIDRT 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L I +TH H DH + L H+ V+A+ +E F+ Sbjct: 53 PDQLDGILVTHEHRDHIHGVGVLARKYHLDVFANQQTWEAMEPLI---GNVPVEQKHLFE 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 G G IES V+H + V D + D + + D Sbjct: 110 MGKVRTFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYL 169 Query: 183 LCAIGNEGILAL 194 + + + +L + Sbjct: 170 MESNHDLEMLRM 181 >gi|257899656|ref|ZP_05679309.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|257837568|gb|EEV62642.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] Length = 269 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N S +K +++D G+S K + I + Sbjct: 9 KISILASGSSG----NSLYIE----SEKKRLLVDAGLSGKKITSL--------MAQIDRT 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L I +TH H DH + L H+ V+A+ +E F+ Sbjct: 53 PDQLDGILVTHEHRDHIHGVGVLARKYHLDVFANQQTWEAMEPLI---GNVPVEQKHLFE 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 G G IES V+H + V D + D + + D Sbjct: 110 MGKVRTFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYL 169 Query: 183 LCAIGNEGILAL 194 + + + +L + Sbjct: 170 MESNHDLEMLRM 181 >gi|229084191|ref|ZP_04216477.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] gi|228699119|gb|EEL51818.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] Length = 244 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 40/236 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 GY +++DCG + P ++ A+ ++H H DH Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVLLSHYHHDHVADI 68 Query: 82 GALHDLW--------SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 G L +P+Y F + + I + + + +G Sbjct: 69 GVLQYARLITSMTKGQLPQLPIYGHGFDVQGFASLTHE----PYTKGIVYNPEETMQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 FSI ++ H + A+ I + +V++ D + + + Sbjct: 125 FSISFLKTVHPVT-CYAMRITAGDKVVVYSADSSYIPEFVPF------------TKDADL 171 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +C+ + + + + DI K A L+ T +++ A+Q Sbjct: 172 FICECNMYVHQEAAKAGHMNSTEVADIAKKANVKELLLTHLPHAGNTSDLVEEAKQ 227 >gi|302878566|ref|YP_003847130.1| hydroxyacylglutathione hydrolase [Gallionella capsiferriformans ES-2] gi|302581355|gb|ADL55366.1| hydroxyacylglutathione hydrolase [Gallionella capsiferriformans ES-2] Length = 257 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 21/111 (18%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + + +++D G D V P + ++ + L IF TH H DH G + L + Sbjct: 20 NDSEAVVVDPG-----------DAV-PVLAYLAENNLKLTGIFCTHRHHDHVGGIEKLRA 67 Query: 90 FLHVPVYASP------FAIGLLEA---KRVYERVSKKIPCISFQAGDKVDV 131 +V VY LLE + + I I D + Sbjct: 68 VYNVAVYGRRHEKNPHITHALLEGEQVRLDAFGLVFDIMEIPGHLDDHIAF 118 >gi|330894758|gb|EGH27419.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 252 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 24/161 (14%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ ++++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYVLVDCGFSLRETER--------RLARLGVA 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L AI +TH H DH + L +VPVY S + + + Sbjct: 46 ANQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRKPVEVAGLL--------A 97 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ + VGA I+ V V H E V D Sbjct: 98 GGESLQVGALGIDVVSVAHDALEPTQFVFNDGKRRFGLLTD 138 >gi|182412591|ref|YP_001817657.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177839805|gb|ACB74057.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 273 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 17/31 (54%) Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASP 99 AI +TH H DH G L L VPV+A P Sbjct: 64 RAIVLTHGHFDHVGGLPWLLQRWQVPVFAHP 94 >gi|169335502|ref|ZP_02862695.1| hypothetical protein ANASTE_01916 [Anaerofustis stercorihominis DSM 17244] gi|169258240|gb|EDS72206.1| hypothetical protein ANASTE_01916 [Anaerofustis stercorihominis DSM 17244] Length = 262 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 19/145 (13%) Query: 28 SPSSRKWIMIDCGVSFPK----DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 S I++D G+ P ++L +D+ D + AI ITH H DH Sbjct: 17 VESENTKILVDAGL--PGSTIVNELKKIDVEISD----------IDAILITHEHSDHIKG 64 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 L +P+Y A + K+ + + + S + H Sbjct: 65 AGVLSRRADIPIYLHRAACDTV---LKKVGRVKEENIYRIEEEIPFYINDVLVNSFSIPH 121 Query: 144 SIPETMALVIRSPVGNIVHTGDWKL 168 + I D + Sbjct: 122 DAVAPIGFTIDDGKTKCGVATDMGM 146 >gi|56478766|ref|YP_160355.1| putative metallo-beta-lactamase family protein [Aromatoleum aromaticum EbN1] gi|56314809|emb|CAI09454.1| putative metallo-beta-lactamase family protein [Aromatoleum aromaticum EbN1] Length = 484 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 123/384 (32%), Gaps = 56/384 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPG---VDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 +G ++ +++DCG+ F + G D + D ++ A+ +TH H DH G Sbjct: 23 HGPGGAKGGMLVDCGI-FQGSEAAGRSNADELAVDFP-----LAHIRALIVTHVHIDHVG 76 Query: 83 ALHDLWSF-LHVPVYASPFAIGLLEAKRVYE---------RVSKKIPCISFQAGDKVDVG 132 + L + P+ SP + +L R+ +++ V G Sbjct: 77 RIPHLLAAGFDGPILCSPPSALMLPEILEDALKIGFTRDTRLIERVLDRIRARIVPVPFG 136 Query: 133 AFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG- 190 + L IR G+I+ + + D + + + G+ G Sbjct: 137 QWHTVFND------GAGRLAIRLQRAGHILGSAYVECDATTVAER----ERIVFSGDLGA 186 Query: 191 --------------ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA---KGCVLVTTF 233 L+ ++T R + + + + ++++A G VL+ F Sbjct: 187 PDSPLLPEPRPPERADRLVIEATYGDRNHEDRATR--RHRLQAVLEHALADGGTVLIPAF 244 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 + + R + ++ E I + + + + +D + + L + E Sbjct: 245 A--IGRTQELLYEIEGIIFEAGDDPR--WKELDIVVDS-PLAAEFTRLYRNLKPYWDEEA 299 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIGHIKNRLVEQ 352 + G L L R E + I G+ + A G + N L Sbjct: 300 TARVRQGRHPLSFDQLLVLDRHEDHLKAVDYLTRTGHPCVVIAGSGMCAGGRVVNYLKAM 359 Query: 353 GVRVIAEDAECPVHVSGHPYPNDL 376 + +G P + L Sbjct: 360 LGDARNDVLFVGYQAAGTPGRDIL 383 >gi|331002176|ref|ZP_08325695.1| hypothetical protein HMPREF0491_00557 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411270|gb|EGG90686.1| hypothetical protein HMPREF0491_00557 [Lachnospiraceae oral taxon 107 str. F0167] Length = 532 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + G K ++D G+ + L P Sbjct: 1 MKLEFI--GADHEVTGSCHYVEVG----DKKFLVDYGMEQGINVYENAPLPVP------- 47 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 + +F+THAH DH G + L + +Y+S + L + Sbjct: 48 -PAQIDYLFVTHAHIDHTGMIPQLVARGFKGEIYSSNATMELCKIMLRD 95 >gi|302342335|ref|YP_003806864.1| beta-lactamase [Desulfarculus baarsii DSM 2075] gi|301638948|gb|ADK84270.1| beta-lactamase [Desulfarculus baarsii DSM 2075] Length = 268 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 21/160 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L F L G G N I++D G+S + + ++ Sbjct: 3 LRFCVL-ASGSKG-NATYIE----GDGGAILVDAGLSARE---LQRRMAMAELD-----P 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 + A+ +TH H DH + L L VPV A+P ++ K K + QA Sbjct: 49 GEIQAVVLTHEHGDHCRGVRVLARRLGVPVLATPKTWAQVQDK-------KGVAFEPIQA 101 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G ++ ++ V+H + + L I + D Sbjct: 102 GQALEYCGLHLQPFSVSHDAADPIGLTIGCGGARLGLCTD 141 >gi|81427694|ref|YP_394692.1| beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78609334|emb|CAI54380.1| Putative metal-dependent hydrolase, beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 268 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 13/154 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + I++D G+S + + I ++ K + ++ +TH H DH + L Sbjct: 23 IETPTQKILVDAGMSGKRVQDL--------MHSIGRDLKEVDSLLVTHEHRDHSSGVGVL 74 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 + VYA+ + + F+ G +G +ES V+H Sbjct: 75 ARRYGIDVYANQPTWDAMASII---GTVPDEHKHVFEMGKTKTLGDIDVESYGVSHDAAA 131 Query: 148 TMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 D + D + D Sbjct: 132 AQFYQFHHNNRAFAILTDTGYVSDQIRGTIENAD 165 >gi|49185906|ref|YP_029158.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|65320372|ref|ZP_00393331.1| COG0491: Zn-dependent hydrolases, including glyoxylases [Bacillus anthracis str. A2012] gi|165868835|ref|ZP_02213495.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167631957|ref|ZP_02390284.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167637443|ref|ZP_02395723.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170684812|ref|ZP_02876037.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170704974|ref|ZP_02895439.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177650098|ref|ZP_02933099.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190564690|ref|ZP_03017611.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227814085|ref|YP_002814094.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229602953|ref|YP_002867336.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254685655|ref|ZP_05149514.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254723066|ref|ZP_05184854.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254738120|ref|ZP_05195823.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254742708|ref|ZP_05200393.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254752436|ref|ZP_05204472.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254760954|ref|ZP_05212978.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|49179833|gb|AAT55209.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164715561|gb|EDR21078.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167514950|gb|EDR90316.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167532255|gb|EDR94891.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170129829|gb|EDS98691.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170671072|gb|EDT21810.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172084050|gb|EDT69109.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190564007|gb|EDV17971.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227004530|gb|ACP14273.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229267361|gb|ACQ48998.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 285 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHVPGFRWIHTPGHTPGHISLFR 185 >gi|90425563|ref|YP_533933.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90107577|gb|ABD89614.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 532 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 61/280 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + L + S ++DCG+ F +L + + A+ Sbjct: 9 GATRTVTGSCYLLKTSAGS----FLVDCGL-FQGPKTLK-EL---NYRAFPFRAAAIDAV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP----------- 119 +THAH DH G L L P+ A+ + L ++ Sbjct: 60 LLTHAHIDHSGLLPKLVREGFKGPILATRGSRDLCSYMLPDAGSIQESEVLALNRRNAAR 119 Query: 120 --------------------CISFQAGDKVDVGA-FSIESVRVNH-----SI-PETMALV 152 V+V H SI E Sbjct: 120 GRGEVEPIYTQADAVASLAGFRPVDYESWVEVIPGVRARFWNAGHLLGSASIEIECAGEG 179 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 R ++ +GD D + D ++ G ++C+ST RE I+ + Sbjct: 180 ARGAPLRLLASGDIGPDAKLL---QPDPEAPA-----GFDYVLCESTYGDRERPPITPEQ 231 Query: 213 IKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDIAEQ 249 + + + ++ A +G +L+ F+ V R + +I + Sbjct: 232 RRVRLAEEVRAAAERRGALLIPAFA--VERTQELIVDLIE 269 >gi|307565645|ref|ZP_07628123.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] gi|307345677|gb|EFN91036.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] Length = 257 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 59/234 (25%) Query: 1 MKNEELVFLPLG-----GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSF 43 MK+ + LG GV IG N + + +++DCG Sbjct: 1 MKHN-MKVTFLGTGTSNGVPFIGCNCEVCKSTDPHDKRLRTSALIETENTRLLVDCG--- 56 Query: 44 PKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHDLWSFL---HVPVYAS 98 PD + + + + +TH H DH G + DL +F + +Y++ Sbjct: 57 ------------PDFRQQILPYPFRKIDGVLLTHIHYDHVGGIDDLRAFCSLGDIDIYSN 104 Query: 99 PFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 L K+ + K +G F IE + V H + Sbjct: 105 KHTCDGLRHNMPYCFTDHLYPGVPKLNLHCIEPHQKFSIGDFEIEPIEVIH----GKLPI 160 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + +G + + D K +V +G+ L+ + R Sbjct: 161 LAYRIGTLAYITDMK---TINPVEVPSL--------KGVKTLIINGLRWERPHH 203 >gi|227499573|ref|ZP_03929680.1| possible hydroxyacylglutathione hydrolase [Anaerococcus tetradius ATCC 35098] gi|227218332|gb|EEI83586.1| possible hydroxyacylglutathione hydrolase [Anaerococcus tetradius ATCC 35098] Length = 200 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 19/147 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 NM + ++DC ++P + +I + + N+ I TH H D Sbjct: 14 NMYVVS---DDDNDGFLVDC--AYPSKRVE---------EYIKENKINIKFIIQTHTHFD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA-GDKVDVGAFSIES 138 H L + V VYAS A + K S + + D ++I + Sbjct: 60 HVLGLEYFKNLYKVDVYASEDAKEIANDKDYNLAYSFDLHVPIDKYLKDGEIFSEYNIMA 119 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ ++M+ I I+ +GD Sbjct: 120 IKTPGHTLDSMSYKIGD----IIFSGD 142 >gi|257885428|ref|ZP_05665081.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257821284|gb|EEV48414.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] Length = 269 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 ++ L G G N S +K +++D G+S K + I + Sbjct: 9 KISILASGSSG----NSLYIE----SEKKRLLVDAGLSGKKITSL--------MAQIDRT 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 L I +TH H DH + L H+ V+A+ +E F+ Sbjct: 53 PDQLDGILVTHEHRDHIHGVGVLARKYHLDVFANQQTWEAMEPLI---GNIPVEQKHLFE 109 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDS 182 G G IES V+H + V D + D + + D Sbjct: 110 MGKVRTFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYL 169 Query: 183 LCAIGNEGILAL 194 + + + +L + Sbjct: 170 MESNHDLEMLRM 181 >gi|255039316|ref|YP_003089937.1| beta-lactamase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254952072|gb|ACT96772.1| beta-lactamase domain protein [Dyadobacter fermentans DSM 18053] Length = 322 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 23/92 (25%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVS--FPK-----DDLPGVDLVFPDITFIMKER 65 G+ +I +N+ L + + W+++D G+ FPK +L G D+ Sbjct: 20 GIKDIMVNVYLI---ANPDKSWVLVDAGLKSAFPKIKKAAAELFGEDV------------ 64 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 +A+ +TH H DH G+L + HVPVYA Sbjct: 65 -PPVAVILTHGHFDHVGSLEAVLREWHVPVYA 95 >gi|328850728|gb|EGF99889.1| hypothetical protein MELLADRAFT_40002 [Melampsora larici-populina 98AG31] Length = 471 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 22/237 (9%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 N+ A F++HAH DHY L W VY S L+ KK + Sbjct: 115 NITAYFLSHAHADHYTRLSHTWDH--GFVYCSQTTANLICHNL----GVKKQWVKPLKDN 168 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVI-----RSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V + + NH P + + + +H GD++ + Sbjct: 169 EPTMVDGVKVTVLDANH-CPGSSLFLFEGVKPQGKPFRYLHCGDFRASPAQLRHP----- 222 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 A+ ++ I D+T + +++ + D++K+ +LV + ++ + R Sbjct: 223 ---ALKDKKIDICYLDTTYLNPKYCFPAQEQVINACSDLVKSRDESILVLIGTYTIGKER 279 Query: 242 SIIDIAEQIGRKIVLLGSS--LKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + IA+ IG KI + + + ++ D L+ + ++ Sbjct: 280 IVKQIAKSIGSKIYCDTRKSLIFKCIEDPELHELMTDDPFKAQVHVTNLFAIKNEML 336 >gi|227824348|ref|ZP_03989180.1| beta-lactamase [Acidaminococcus sp. D21] gi|226904847|gb|EEH90765.1| beta-lactamase [Acidaminococcus sp. D21] Length = 207 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-ERKNLMAIFITHAHE 78 N L + + + I+ID P D+ + + + K K + AIFITH H Sbjct: 14 NCYLI--KNEETGEGIIID-----PGDEALKI------MEAVKKAGIKKITAIFITHGHG 60 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLE 106 DH AL ++ VY S +L Sbjct: 61 DHISALDEVKKLTGAKVYMSREDAPMLR 88 >gi|152974651|ref|YP_001374168.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023403|gb|ABS21173.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 244 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 40/236 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 GY +++DCG GV +I ++ A+ ++H H DH Sbjct: 21 GYLFEHDGFRLLVDCGS--------GVLAQL--QKYIA--PSDIDAVLLSHYHHDHVADI 68 Query: 82 GALHDLW--------SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 G L +P+Y F + + I + + + +G Sbjct: 69 GVLQYARLITNATKGQLPQLPIYGHGFDVQGFASLTHE----PHTKGIVYHPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILA 193 FSI ++ H + A+ I + +V++ D + I + Sbjct: 125 FSISFLKTVHPVT-CYAMRIAAGDKVVVYSADSSYIPEFIPF------------TKDADL 171 Query: 194 LMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +C+ + + +I K+A LV T + +++ A+Q Sbjct: 172 FICECNMYAHQEAAKAGHMNSIEAANIAKHANVKKLVLTHLPHIGNPADLVEEAKQ 227 >gi|229160159|ref|ZP_04288159.1| Beta-lactamase domain protein [Bacillus cereus R309803] gi|228623293|gb|EEK80119.1| Beta-lactamase domain protein [Bacillus cereus R309803] Length = 244 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG GV +I ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFQSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGDDIVVYSADSSYIPEFIPF 165 >gi|330889338|gb|EGH21999.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 455 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 37/209 (17%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 31 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 90 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 91 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 150 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 151 FSGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALERIIDK 202 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 203 ALEDNGTVLIPAFS--IGRTQELLYELED 229 >gi|311113411|ref|YP_003984633.1| beta-lactamase superfamily hydrolase [Rothia dentocariosa ATCC 17931] gi|310944905|gb|ADP41199.1| beta-lactamase superfamily hydrolase [Rothia dentocariosa ATCC 17931] Length = 295 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 75/240 (31%), Gaps = 38/240 (15%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + L + W +++D G + GV +I + AI I+H H Sbjct: 20 SCYLLSATDYAGHTWRVLMDMG-----NGSLGVLQ-----RYID--LAEIDAILISHLHP 67 Query: 79 DHY---GAL-------HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC------IS 122 DH L W +P+Y + E + + Sbjct: 68 DHCIDLSGLHVAVKWDPRGWPKGRIPLYGP---AAINEYLSATHGLDPDPGMSTEFEYHT 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDW-KLDDDAILGDV 177 + G KV++G F++E RV H + AL I + ++GD D Sbjct: 125 WDEGHKVEIGPFTVEPFRVLHPAKDPYALRITCNSRDGRTLFAYSGDTDTCDGLIKAARG 184 Query: 178 TDKDSLCAIGNEGI-LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D A EG AL R G E G++ + + + T + S Sbjct: 185 ADLFLCEAAYQEGRDDALRGIHLTGKRAGEAAQEAGVRNLLLTHLPVWNDPDIARTEAQS 244 >gi|332532385|ref|ZP_08408265.1| metallo-beta-lactamase family protein, RNA-specific [Pseudoalteromonas haloplanktis ANT/505] gi|332038252|gb|EGI74698.1| metallo-beta-lactamase family protein, RNA-specific [Pseudoalteromonas haloplanktis ANT/505] Length = 458 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 91/265 (34%), Gaps = 49/265 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + + + ++IDCG+ +D D++ I ++ A+ Sbjct: 7 GAVNGVTGSCHEL---VVNEQTSVLIDCGLFQGEDSK-------ADLS-IEFNITHVTAL 55 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGL----LEAKRV-------------YER 113 +TH H DH G + L + P++ S + L +E Sbjct: 56 IVTHCHIDHVGRIPYLLAAGFKGPIFTSIASASLLPLVIEDALKVGVTRDPKIIAACLSL 115 Query: 114 VSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVI-----RSPVGNIVHTGD 165 ++K+I + ++ ++ R H I + + I + +V +GD Sbjct: 116 LNKRIVAVDYKTWFELPCKGPSKAKARFQRAGH-ILGSAYVEIDVTNSNNNKHRVVFSGD 174 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-IKKNIYDIMKNA 224 +L L+ +ST + E+ K+I + + Sbjct: 175 LGAPYTPLLPSP--------KPPYKADTLVIESTYGDKNHQGRKERTQTLKSIIERAVSD 226 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VLV FS + R + ++ EQ Sbjct: 227 NGVVLVPAFS--IGRTQELLYELEQ 249 >gi|260887824|ref|ZP_05899087.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|330838609|ref|YP_004413189.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|260862430|gb|EEX76930.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|329746373|gb|AEB99729.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 213 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 19/149 (12%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG +G+N + S++ I ID G ++ I ++ NL AI Sbjct: 10 VGALGVNCYILH--EEGSKEAIAIDPG---GSEETV--------WQHIQEDGLNLKAILN 56 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGD 127 THAH DH GA+ L +Y +L + + + I + G+ Sbjct: 57 THAHADHIGAIDFLREKTGAKLYIHEADAPMLLDAQKNLSAFMGTPIMTRPADILLKGGE 116 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSP 156 +++G + P + ++ Sbjct: 117 VLEIGGMKFTVLHTPGHSPGGVCYLMEDR 145 >gi|226314362|ref|YP_002774258.1| hypothetical protein BBR47_47770 [Brevibacillus brevis NBRC 100599] gi|226097312|dbj|BAH45754.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 286 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 24/159 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHA 76 N+AL G ++ W+++D G+ + G+ + AI +TH Sbjct: 44 NIALVG----DAKSWVLVDAGMPQSAKQIIGI---------AQERFGEGAKPRAILLTHG 90 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI------PCISFQAGDKVD 130 H DH GA+ +L VPVYA I L + Y + + +D Sbjct: 91 HFDHVGAVIELVKAWRVPVYAHSLEIPYLTGQTYYPEPDGTVEGGLLAMISPLFPNEPID 150 Query: 131 VGAFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKL 168 +G+ + + + S+PE I +P + H ++ Sbjct: 151 LGS-HVHPLPEDGSVPEMPGWRWIHTPGHSPGHISFFRD 188 >gi|28868959|ref|NP_791578.1| hypothetical protein PSPTO_1753 [Pseudomonas syringae pv. tomato str. DC3000] gi|28852199|gb|AAO55273.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331016849|gb|EGH96905.1| hypothetical protein PLA106_12440 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 480 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 114/402 (28%), Gaps = 62/402 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + + SS ++IDCG S + G +++ + + + A+ Sbjct: 10 GAVDTVTGSCHQLRMDASSS---LLIDCG-SVQERGASG------EVSPFGFDPEAIRAL 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQ 124 ITH H DH G + +L + P+ S + LL K + ++ Sbjct: 60 LITHVHNDHVGRIPELLASGYEGPILCSEPSAHLLPLVMEDSLKIQFAHDPEQAERHLAL 119 Query: 125 AGDKVDVGAF--------------SIESVRVNH-----SIPETMALVIRSPVGNIVHTGD 165 ++ F + R H I + + +V +GD Sbjct: 120 INKRIIALPFDNWFSLVDRESLHCRVRLQRAGHILGSAYIECDLHYPLEGCSMRVVFSGD 179 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNA 224 L E L+ +ST R S + + I D Sbjct: 180 LGASHTPFLP--------APKPPEHADILVLESTYGDRLHEDRSIRQQELERIIDRALED 231 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 G VL+ FS + R + ++ E I R+ + G + + D Sbjct: 232 NGTVLIPAFS--IGRTQELLYELEDILRRKMPSGDAAHSSARLNEDDVPPADWSRLPIIL 289 Query: 285 SFGL------------YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS- 331 L ++ + + +P ++ + Sbjct: 290 DSPLASRFTRAYQSFEDYWDEGARLRLDAGRKPLGFDQLITINTHEEHLRTVNYLASTAR 349 Query: 332 -SRAIPGNEV-AIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 + I GN + A G I N L G P Sbjct: 350 PAIVIAGNGMCAGGRIVNYLKAMLGDPRHNVVFVGYQGKGTP 391 >gi|66826811|ref|XP_646760.1| beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] gi|74858209|sp|Q55BS1|CPSF2_DICDI RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|60474609|gb|EAL72546.1| beta-lactamase domain-containing protein [Dictyostelium discoideum AX4] Length = 784 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 54/188 (28%), Gaps = 40/188 (21%) Query: 6 LVFLPLGGV-GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F L G E + Y I++DCG+S+ D + + K Sbjct: 5 IKFTALSGAKDE-----SPPCYLLEIDDFCILLDCGLSYNLDFSL--------LEPLEKV 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAI--------GLLEAKRVYERV 114 K + A+ ++H+ H G L + +Y + + L E K E Sbjct: 52 AKKIDAVLLSHSDTTHIGGLPYVVGKYGLTGTIYGTTPVLKMGTMFLYDLYENKMSQEEF 111 Query: 115 SKKIPCISFQAGDKVDV---------------GAFSIESVRVNHSIPETMALVIRSPVGN 159 + + SI H+I I + Sbjct: 112 QQYSLDNIDSCFGEDRFKELSFSQHYSLSGKGKGISITPYLAGHTI-GASVWKITKGTYS 170 Query: 160 IVHTGDWK 167 IV+ D+ Sbjct: 171 IVYAIDYN 178 >gi|74194185|dbj|BAE24650.1| unnamed protein product [Mus musculus] Length = 396 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 117/362 (32%), Gaps = 68/362 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L L+ DS NA ++ ++ + ++ Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSR-----PSLLITDSFNATYVQPRRKQRD-EQLLTNV 223 Query: 221 MK--NAKGCVLVTTFSS----SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 ++ G VL+ ++ ++++ I + G + + ++ Sbjct: 224 LETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALL 269 Query: 275 KKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + S ++L+ + P + ++ V+ +S Sbjct: 270 NNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLAS 329 Query: 333 RA 334 + Sbjct: 330 QP 331 >gi|28377008|ref|NP_783900.1| hydrolase [Lactobacillus plantarum WCFS1] gi|254555224|ref|YP_003061641.1| hydrolase [Lactobacillus plantarum JDM1] gi|300769139|ref|ZP_07079028.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179225|ref|YP_003923353.1| hydrolase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28269839|emb|CAD62736.1| hydrolase [Lactobacillus plantarum WCFS1] gi|254044151|gb|ACT60944.1| hydrolase [Lactobacillus plantarum JDM1] gi|300493379|gb|EFK28558.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308044716|gb|ADN97259.1| hydrolase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 271 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 19/166 (11%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + ++ L G G N+ + +++D G+S K + I Sbjct: 9 DMKVSILASGSTG----NVTYIE----TPEHKVLVDAGLSGKKIANL--------MASID 52 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 ++ + ++FI+H H DH + L + VYA+ + K C Sbjct: 53 RDINEVDSLFISHEHTDHCHSAGILARKYGMDVYANQGTWDAMAHKI---GNVPAELCHV 109 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 F + +G +ES V+H E + + V D Sbjct: 110 FDPNTTLGLGDLDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGY 155 >gi|8393762|ref|NP_058552.1| cleavage and polyadenylation specificity factor subunit 2 [Mus musculus] gi|18202027|sp|O35218|CPSF2_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|2331036|gb|AAB66830.1| cleavage and polyadenylation specificity factor [Mus musculus] gi|15489017|gb|AAH13628.1| Cleavage and polyadenylation specific factor 2 [Mus musculus] gi|148686924|gb|EDL18871.1| cleavage and polyadenylation specific factor 2 [Mus musculus] Length = 782 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 117/362 (32%), Gaps = 68/362 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L L+ DS NA ++ ++ + ++ Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSR-----PSLLITDSFNATYVQPRRKQRD-EQLLTNV 223 Query: 221 MK--NAKGCVLVTTFSS----SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 ++ G VL+ ++ ++++ I + G + + ++ Sbjct: 224 LETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALL 269 Query: 275 KKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + S ++L+ + P + ++ V+ +S Sbjct: 270 NNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLAS 329 Query: 333 RA 334 + Sbjct: 330 QP 331 >gi|196250908|ref|ZP_03149592.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|196209549|gb|EDY04324.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 282 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPG-VDLVFPDITFIMKERKNLMAIFITHAHE 78 N+ L G P R ++++D G +PG D + + E AI +TH H Sbjct: 41 NICLV--GRPDDRTFVLVDAG-------MPGSADDIISVVEQRFGENSRPQAIILTHGHF 91 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 DH GA+ +L +V VYA P + L K Sbjct: 92 DHVGAIVELVKHWNVTVYAHPAELPYLTGK 121 >gi|328956409|ref|YP_004373795.1| putative metallo-hydrolase [Carnobacterium sp. 17-4] gi|328672733|gb|AEB28779.1| putative metallo-hydrolase [Carnobacterium sp. 17-4] Length = 270 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 64/194 (32%), Gaps = 25/194 (12%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP--KDDLPGVDLVFPDITFIM 62 ++ L G G N+ S +K I++D G+S + L +D D Sbjct: 10 KVSILASGSSG----NVTYIE----SEKKKILVDSGLSGKKITELLKKIDRDVAD----- 56 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 L I +TH H DH + L H+ VYA+ EA K Sbjct: 57 -----LDGILVTHEHRDHVHGVGVLARKYHLDVYANEQTW---EAMTPIIGTIKTEQKYL 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDK 180 F+ G + +G +ES V+H V D + D + D Sbjct: 109 FEMGKTMTIGDIDVESFGVSHDAIAPQFYSFHKDNKCFVMLTDTGYVSDRMRGIVSNADA 168 Query: 181 DSLCAIGNEGILAL 194 + + +L + Sbjct: 169 YLFESNHDLEMLRM 182 >gi|198435618|ref|XP_002127104.1| PREDICTED: similar to Bacterially-derived sulfatase required for use of alkyl- and aryl-sulfates as sulfur sources; Bds1p [Ciona intestinalis] Length = 588 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 26/199 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 NMA+ I++D + P+ L V I K + AI +TH H D Sbjct: 70 NMAMIE----GRDGIIIVDSTLG-PESAL----KVLAAFRNITD--KPIKAILVTHFHAD 118 Query: 80 HYGALHDLWSFL--HVPVYASPFAIG-LLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 H G L + + + VY+ L E+ + +++ V F+ Sbjct: 119 HTGGLDAVLQTVEKGIDVYSHKLTKDQLSESFLTRQGATERTSRQFGMKLPSSKVPNFTF 178 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +V H+ + + L I + HT D +I + ++G+L Sbjct: 179 TAVHPTHTFDKELTLNIAGVKIQLFHTPGETNDHCSI-----------WLPDKGVL-FSA 226 Query: 197 DSTNAMREGTCISEKGIKK 215 D+ + I++ Sbjct: 227 DNLYSSFPNIYPVRGEIRE 245 >gi|196032088|ref|ZP_03099502.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228946708|ref|ZP_04109016.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195994839|gb|EDX58793.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228813005|gb|EEM59318.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 285 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 22/149 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S +I++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFILVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 + +L + VPVYA I L ++ Y + + + F E + + + Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPL----FPNEPIDLGN 151 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDA 172 SI + G + H D++ Sbjct: 152 SI------KVLPTDGTVPHMPDFRWIHTP 174 >gi|295108480|emb|CBL22433.1| Zn-dependent hydrolases, including glyoxylases [Ruminococcus obeum A2-162] Length = 209 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 40/161 (24%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + + ++ID P D+ ++ I++ + N +AI +TH H D Sbjct: 17 NCYFL--KNKETGEMLIID-----PGDNAEKIE------QKILEMQGNPVAILLTHGHFD 63 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG------------- 126 H A + +P+YAS E+ + Sbjct: 64 HILAAEAIRDRYQIPIYASQ----------KEEKTLQDPKINLTAYHMNSYTLKADVYLT 113 Query: 127 --DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + FS++ + + ++ ++ +GD Sbjct: 114 DLQVARLAGFSVQMIETPGHTVGSCCYYLKDEG--VLFSGD 152 >gi|157822735|ref|NP_001100223.1| cleavage and polyadenylation specificity factor subunit 2 [Rattus norvegicus] gi|149025374|gb|EDL81741.1| cleavage and polyadenylation specific factor 2 (predicted) [Rattus norvegicus] Length = 782 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|300362616|ref|ZP_07058792.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus gasseri JV-V03] gi|300353607|gb|EFJ69479.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus gasseri JV-V03] Length = 265 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKVSVLSSGSAG----NSTLIE----TPQHKILMDAGLSGKKTKDLLAQVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKK 117 K++ +FI+H H DH G L L + YA+ L+E+ ++ Sbjct: 47 ------KDIDMVFISHDHTDHSGGLGVLVRRYPKISAYANSGTWNYLIESNKI--GKLPV 98 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +F++G G + S +H + V S D + G++ Sbjct: 99 EQINTFESGITKTFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEI 158 Query: 178 TD 179 D Sbjct: 159 KD 160 >gi|325276945|ref|ZP_08142629.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] gi|324097920|gb|EGB96082.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] Length = 448 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 80/240 (33%), Gaps = 42/240 (17%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVP 94 ++DCG+ D PG + + + A+ +TH H DH G + L + P Sbjct: 2 LVDCGLEQGTDAAPGAESAPLSFD-----IQGIRALIVTHVHLDHVGRIPALLAAGYRGP 56 Query: 95 VYASPFAIGLLEAKRVY-----------------ERVSKKIPCISFQAGDKVDVGA---F 134 + S + LL ERV+ I + F+ +V + Sbjct: 57 IICSEPSARLLPLVLEDAYRVGINREPAQVARYLERVTSLIVPLPFEQWHEVVMEPGLQC 116 Query: 135 SIESVRVNHSIPETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 I R H + V +GD + +L + + Sbjct: 117 RIRLQRAGHLLGSAYVECDLLHGSINTRYVFSGDLGNGANPLLRPLRPPER--------A 168 Query: 192 LALMCDSTNAMREGTC--ISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L+ +ST R ++ ++ I + + KG +L+ FS + R + ++ E Sbjct: 169 DVLVLESTYGDRLHPVKGGRQQQLEAAIDRALAD-KGTILIPAFS--LGRTQELLYEIED 225 >gi|225429732|ref|XP_002280362.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081740|emb|CBI20745.3| unnamed protein product [Vitis vinifera] Length = 723 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 114/336 (33%), Gaps = 40/336 (11%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++ R++ F+TH H DHY L SF H +Y S L+ K + Sbjct: 406 FRYL---RRDCSHWFLTHFHLDHYQGLT--RSFCHGKIYCSAITARLVNMKI---GIPWD 457 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGD 176 I K+++ + + NH P ++ ++ S ++HTGD++ ++ Sbjct: 458 RLQI-LPLNQKINIDGVDVTCLDANH-CPGSIIILFEPSNGKAVLHTGDFRFSEEMTS-- 513 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 + + I L+ D+T + E I+ I I A Sbjct: 514 ------MSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFN-------PR 560 Query: 236 SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 ++ I S E++ ++ + K+V A + I++ + D + ++ Sbjct: 561 TLFLIGSYTIGKERLFLEVARVLR--KKVYVNAAKLHILECLEFQKEDMQWFTLNEQESH 618 Query: 296 VIATGSQGEPRSALAQLSRGEM-RNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGV 354 + P LA R + N ++ S R +QG Sbjct: 619 IHVV-----PMWTLASFKRLKHISNQYAGRFSLIVAFSPTGWTFGKGKKKTPGRRWQQGT 673 Query: 355 RVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + E S H +L+ +++ P ++ Sbjct: 674 IIRYEVP-----YSEHSSFTELREFVKFVSPVNIIP 704 >gi|120435804|ref|YP_861490.1| metallo-beta-lactamase domain-containing protein [Gramella forsetii KT0803] gi|117577954|emb|CAL66423.1| metallo-beta-lactamase domain protein [Gramella forsetii KT0803] Length = 253 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 35/222 (15%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHY 81 + I+IDCG PD + + L AIF TH H DH Sbjct: 36 VSILITWNDLNILIDCG---------------PDFRQQMLANNVQKLDAIFYTHEHNDHT 80 Query: 82 GAL----HDLWSFLHVPVYASPFAIGLLEAKRVY-ERVSKKIPCISFQAGDKVDVGAFSI 136 L + +PV+A + L + Y K P ++ FS Sbjct: 81 AGLDDIRPFFFRQGDIPVFAHQRVLTALRKRFDYIFTTENKYPGAPGVTEHIIENKPFSF 140 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 + V + + D+ +TD ++ E + L Sbjct: 141 HGLTVT-----PVEFMHNRLQVFGFRVEDF--------AYLTDLKTIEEQEIEKLRDLKV 187 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 +A+R S +++ + I K +T S + Sbjct: 188 LVVSALRIEPHHSHFNLEEALEFIEKVQPEKAYLTHISHMLG 229 >gi|74183852|dbj|BAE24504.1| unnamed protein product [Mus musculus] Length = 493 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|325679426|ref|ZP_08159011.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] gi|324109023|gb|EGC03254.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] Length = 214 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 12/113 (10%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-------AKRVYER 113 + + L IF+TH H DH GA+ DL VY P +L A Sbjct: 42 LEFYKCKLKKIFLTHGHFDHIGAVADLVEKTGCEVYIHPLDEKMLRNGDAMLAAHFRSRG 101 Query: 114 VSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ F D + + + + P ++ + G ++ TGD Sbjct: 102 YKTYNGDVTLFTENDILRLDELEFDVLETPGHTPGSVCFI----CGEVMFTGD 150 >gi|228928164|ref|ZP_04091208.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831581|gb|EEM77174.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 285 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGIVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPGFRWIHTPGHTPGHISLFR 185 >gi|147679022|ref|YP_001213237.1| Zn-dependent hydrolases [Pelotomaculum thermopropionicum SI] gi|146275119|dbj|BAF60868.1| Zn-dependent hydrolases [Pelotomaculum thermopropionicum SI] Length = 228 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 71/247 (28%), Gaps = 45/247 (18%) Query: 1 MKN-EEL--VFLPLGG---VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----- 49 MK +++ +GG E + + Y + ++D G+ F + Sbjct: 3 MKKPDKVYERVYLVGGPEITDE--RDCCV--YLVDGGSELALVDAGLGFSGRQILDNIRS 58 Query: 50 -GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 G+D L + TH H DH G L + L V + Sbjct: 59 SGIDPSL------------LKYVVATHGHIDHIGGL-HFFQSLGAKVVCHELEKKAVSEG 105 Query: 109 R----VYERVSKKIPCISFQ-----AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 R + K ++ G+ + VG + + P ++L + Sbjct: 106 RPELTAEWYYNVKYRPVNPDLILSGDGEDLPVGDLKLHCLFTPGHTPGGVSLYLDVGGTR 165 Query: 160 IVHTGDWK--LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 I+ D D D D + +L L D G +K I Sbjct: 166 ILFGQDIHGPFDPSW----GADTDEWKKSMKK-LLELKADILCEGHYGIYRPASRVKDYI 220 Query: 218 YDIMKNA 224 +++ Sbjct: 221 ESCLRSH 227 >gi|295091903|emb|CBK78010.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Clostridium cf. saccharolyticum K10] Length = 352 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 89/295 (30%), Gaps = 69/295 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDDLPGVDLVFPDITF 60 + +G E+ + + I+IDCG+ + +LP +++ Sbjct: 1 MRLTFIGADHEVTGSCHYLEACGLN----ILIDCGMEQGSNKYQNQELP--------VSY 48 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKI- 118 ++ + +TH+H DH G L +++ + AS L ++ Sbjct: 49 -----ADIDYVLVTHSHIDHVGMLPFIFARGFSGQIMASRATCDLCNIMLKDCAHIQESE 103 Query: 119 ------------------------------PCISFQAGDKVDV-GAFSIESVRVNHSIPE 147 + + + + + I H + Sbjct: 104 AEWKNRKAKRAGRPQEPPLYTMNDAEGVLKHFVPCEYNEIIRLSEGVEIRFTDAGHLLGS 163 Query: 148 TMALVIRSPVGN---IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 V + G IV +GD + + + + ++ +ST R Sbjct: 164 AFIEVWLTEDGCSKKIVFSGDIG---NMNKPLIRNPQYIAQ-----ADYVVMESTYGDRL 215 Query: 205 GTCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 +E + + G V++ F+ V R + ++ +I + ++ G Sbjct: 216 HRHSAEHIEEFARVIQETLDRGGNVVIPAFA--VGRTQEVLYYIRRIKEEGLVTG 268 >gi|149708883|ref|XP_001495792.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Equus caballus] Length = 533 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 107/323 (33%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP + LL + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPISAYLLHRHLQVSKRWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + +G Sbjct: 85 IGRETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPA------LRVGK 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+TN S++ + I ++++ + S + + + +A Sbjct: 138 Q-IHTLYLDNTNCNPALVLPSQQEAARQIVELIRKHPQHHIKIGLYS-LGKESLLEQLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ + +G+ + +++ ++ + + + + + Sbjct: 196 EFQTWVVLSPRRLE----LVQLLGLADVF--TVEEKAGRIHAVDHVEICHS-------AM 242 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L + + I S + S Sbjct: 243 LHW--NQTHPTIAILPTSRKICRSHP--------------------------DIHIIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRAFVSALKPCQVVPI 297 >gi|308809469|ref|XP_003082044.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] gi|116060511|emb|CAL55847.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] Length = 607 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 54/413 (13%), Positives = 120/413 (29%), Gaps = 53/413 (12%) Query: 72 FITHAHEDHYGALHDLWS---------------------FLHVP-VYASPFAIGLLEAKR 109 +TH H DHY L + P +Y S L+ Sbjct: 35 VLTHFHADHYCGLTSSYGRAETTTRATTTGDGVDASSAIDGRAPKIYCSKITARLVIEVL 94 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS--PVGNIVHTGDWK 167 + ++ + + + + NH P + R+ ++HTGD++ Sbjct: 95 GVR--ASRVEALEVGETTILGDTEIEVTFIDANH-CPGACLVFFRNVRTNETLLHTGDFR 151 Query: 168 LDDDAILGDVTDKDS-LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 + + L + G + D+T ++ T + + + + I + Sbjct: 152 A--ARRVREDVHLARCLARCVDGGPDEVHLDTTYCEKKWTFPDQDVVLEAMRKIAEEESK 209 Query: 227 C---VLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSD 283 L S SV + R+I + + + + + +V + D D Sbjct: 210 REPRTLFLCGSYSVGKERAIRAVCQGARTRASVTSRRKRSLVLSEW----WRDDLFVCED 265 Query: 284 ESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN---VKLAEKDTVIFSSRAIPGNEV 340 ++ R ++ V G R+ + + R V + S G Sbjct: 266 DNPEEAARCRVRVCGLGKGSNHRAMMDIIKNEAPRWGAVVAFSPTGWSYRKSMEKDGEFR 325 Query: 341 AIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 I+N + V S H +L+ ++++P+ + Sbjct: 326 VEPWIENEGRTRTYAVPY---------SEHSSYTELREFIKFLKPKRITPT-VNASTENE 375 Query: 401 HKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADL 453 ++L + + V + K + + + D ++ D Sbjct: 376 REKLVNKHFLDLVDLKYDVKRIDFY---FKNGGVAEKKQKTSDVIVVIDSEDE 425 >gi|260881145|ref|ZP_05893320.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] gi|260849641|gb|EEX69648.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] Length = 222 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 11/79 (13%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 Y Y ++ +ID G K + I ++ + AI +TH H DH Sbjct: 25 TNAYIYADNETKHGFLIDPGAQAGKL-----------LELICEKGLTIEAILLTHGHFDH 73 Query: 81 YGALHDLWSFLHVPVYASP 99 GA+ +L L +PVY Sbjct: 74 IGAVSELQETLKIPVYMGK 92 >gi|327441769|dbj|BAK18134.1| Zn-dependent hydrolase, including glyoxylase [Solibacillus silvestris StLB046] Length = 331 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 27/203 (13%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK---ERKNLM 69 G+G I N +Y + + +ID G+ + + + + E + Sbjct: 23 GLGSI--NCYVY----QNGEDYTLIDAGIKNEEFEQF-------FYRKLKEYNIEINQIT 69 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAI-------GLLEAKRVYERVSKKIPCIS 122 I +TH H DH G ++ + + +PVYAS AI L+ K + + + Sbjct: 70 RIILTHFHNDHIGVVNQIANEYPIPVYASEIAIPRLKCEDDYLQQKLSFYYELYEQYGVP 129 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 A +++ H + L + + D++ Sbjct: 130 EFARERMA--KMENTLQNKEHVMIYPPILKLEDGQAIGGLRVMTAPGHSPDSICLFDEE- 186 Query: 183 LCAIGNEGILALMCDSTNAMREG 205 G L TNA+ + Sbjct: 187 -TGWLFAGDFLLATGMTNALIDH 208 >gi|237748899|ref|ZP_04579379.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes OXCC13] gi|229380261|gb|EEO30352.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes OXCC13] Length = 260 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 22/163 (13%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N L + +M+DCG G+ + + E Sbjct: 1 MRFTSLG-SGSKG-NSLLVSTEDGLTSTTVMVDCG--------FGIREMTRRLNRAGCEP 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS--- 122 +L AI +TH H DH G+ L +P++ S ++ + K + Sbjct: 51 ADLSAIIVTHEHSDHAGSALTLAKRYQIPLWMSYGT---------FQSLGKDFSGVELNF 101 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + GD V F + + V+H E + I D Sbjct: 102 CRDGDSFSVNDFQVNAFTVSHDAREPLQFSIDDGHAKFGMLTD 144 >gi|300856328|ref|YP_003781312.1| putative phage-like hydrolase [Clostridium ljungdahlii DSM 13528] gi|300436443|gb|ADK16210.1| putative phage-related hydrolase [Clostridium ljungdahlii DSM 13528] Length = 242 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 28/155 (18%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L L G G N L + + ++I+CG+S+ + + F ++ Sbjct: 1 MKLKVLGSGSSG----NCYLL----QNKDETLIIECGLSY--------KTILKGLNFDLR 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ I+H H+DH A++D+ + + VY S + + K Sbjct: 45 N---VVGCLISHEHKDHSKAVNDVLNNA-IDVYTSEETLKAINIK--------NYRAKII 92 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG 158 +A ++ ++G F+I ++ H + + +I Sbjct: 93 RAEEQFNIGQFTILPIKTQHDAADPLGFLIYHSDF 127 >gi|227871729|ref|ZP_03990138.1| possible hydroxyacylglutathione hydrolase [Oribacterium sinus F0268] gi|227842438|gb|EEJ52659.1| possible hydroxyacylglutathione hydrolase [Oribacterium sinus F0268] Length = 210 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 13/88 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++R+ ++ID P D+ + + I +ER NL AI +TH H D Sbjct: 15 NCYLV--WNKATREGVLID-----PGDEAERI------CSAIAEERVNLKAILLTHGHFD 61 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA 107 H +L VP+YAS +LE Sbjct: 62 HILVAEELKEKYDVPLYASKEEKEMLEN 89 >gi|206560527|ref|YP_002231292.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] gi|198036569|emb|CAR52466.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] Length = 258 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 28/169 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD------LPGVDLVFPDIT 59 + F LG E N + S ++ +++DCG S + + GV Sbjct: 1 MRFASLGSGSE--GNALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLGV-------- 50 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 +L AI ITH H DH G+ L +P+Y S + A + Sbjct: 51 ------ADLDAILITHEHSDHVGSALTLARRASLPLYMSWGTARAVGA------DEADVD 98 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + ++ V H E + V + D + Sbjct: 99 LHVLWGDETAAIRDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGM 147 >gi|297472828|ref|XP_002686220.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Bos taurus] gi|296489426|gb|DAA31539.1| DNA cross-link repair 1B [Bos taurus] Length = 542 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 103/323 (31%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLTHMHSDHTVGLTSTWTR---PLYCSPITAYLLHRHLQVSKQWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V ++ + NH P ++ + G I++TGD++ + +G Sbjct: 85 VGRETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPA------LRLGK 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+TN + S++ + I ++++ + S + + + +A Sbjct: 138 Q-IHTLYLDNTNCNPDLVLPSQEEAARQIVELIRKHPQHNIKIGLYS-LGKESLLERLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSAMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I+ S + S Sbjct: 246 -----NQTHPTIAILPTSRKIYRSHPNI--------------------------HVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRVFVAALKPCQVVPI 297 >gi|297625345|ref|YP_003687108.1| exonuclease of the beta-lactamase fold involved in RNA processing [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921110|emb|CBL55657.1| exonuclease of the beta-lactamase fold involved in RNA processing [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 464 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 63/473 (13%), Positives = 128/473 (27%), Gaps = 90/473 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M LG + + + + + +M+D G F + Sbjct: 1 MSKPVATLTFLGAARTVTGS----KFLLDLNERRLMVDAG-MFQGAR-----------EW 44 Query: 61 IMKERKN-------LMAIFITHAHEDHYGALHDLWSF-LHVPVYASP----FAIGLLEA- 107 + + + + ITHAH DH G + L H ++ +P +L Sbjct: 45 RRRNWDDFPVDPATITDLLITHAHMDHSGYIPALVKHGFHGRIHCTPQTRELTAIVLRDS 104 Query: 108 ---KRVYERVSKKIPCISFQAGDKVDV-----------------------GAFSIESVRV 141 + R + + + G R Sbjct: 105 ANLQVNEARDAARGGYSKHNPPLPLYDEADVERSLPLFHDVAFDRDLDLGGGVHARFTRA 164 Query: 142 NHSIPETMALVIR---SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 H I + ++ + P +++ +GD D +L EG +++ +S Sbjct: 165 GH-ILGSASIRVWLADDPQISVLFSGDLGRDQHPVLRR--------REEPEGATSVLIES 215 Query: 199 TNAMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTFSSS----VSRIRSIIDIAEQIGR 252 T RE E + G VL+ F+ + ++ + A +I Sbjct: 216 TYGNREHPTGDEEDHEALAGLIRRTIARGGSVLIPAFAVDRTEILIKVLGEMQHAGRIPP 275 Query: 253 KIVLLGSSLKR-VVSVAIDVGIIKKDQLFLSDESFGLYP-----REQLIVIATGSQGEPR 306 + + S + + V G + + + + P R + +A +P Sbjct: 276 VPIFINSPMGSAALDVYQGTGAHAELRADIDISALLNLPTLRDVRTKEESVALNRPAQPC 335 Query: 307 -----SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 S +A R + + + + Sbjct: 336 IIISASGMATGGRVVHHLRHMLPDPRNAVVFTGYQALGTRGRSLVEGAKQIKMYGRYVPV 395 Query: 362 EC----PVHVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQE 408 + S H +L + PQV+ +HGEP + +E Sbjct: 396 KAEVLLDTAFSVHADAPELLEWLAALSPAPQVVYCVHGEPKSAEHLADTISEE 448 >gi|297465541|ref|XP_589521.4| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Bos taurus] Length = 507 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 103/323 (31%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + D+ Sbjct: 28 FLTHMHSDHTVGLTSTWTR---PLYCSPITAYLLHRHLQVSKQWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 V ++ + NH P ++ + G I++TGD++ + +G Sbjct: 85 VGRETMTVTLLDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPA------LRLGK 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+TN + S++ + I ++++ + S + + + +A Sbjct: 138 Q-IHTLYLDNTNCNPDLVLPSQEEAARQIVELIRKHPQHNIKIGLYS-LGKESLLERLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 EFQTWVVLSPRRLE-------LVQLLGLADVFTVEEKAGRIHAVDHMEICHSAMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I+ S + S Sbjct: 246 -----NQTHPTIAILPTSRKIYRSHPNI--------------------------HVIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRVFVAALKPCQVVPI 297 >gi|150378309|ref|YP_001314903.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150032856|gb|ABR64970.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 300 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 20/85 (23%) Query: 20 NMALYGYGSPSSRKWIMIDCGV-------SFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 N+ +G R+W++ID GV + ++ G + AI Sbjct: 33 NVVSFGKPGADDREWVLIDAGVIGTTGLITGAAEERFG-------------PKSRPAAIV 79 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYA 97 +TH H DH GAL +L PVY Sbjct: 80 MTHGHFDHVGALEELSERWQAPVYT 104 >gi|118579576|ref|YP_900826.1| beta-lactamase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502286|gb|ABK98768.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379] Length = 256 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 18/147 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G ++ID G+S ++ + ++ D + + + +TH H Sbjct: 12 GNCLYLETG----DTRVLIDAGLSL-RETVLRMEGRAIDASG-------VHGVLVTHEHI 59 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + VP+ AS L++ K E+ K I F++G +++ I+ Sbjct: 60 DHIRSAGSFARKFKVPILASH----LVQHKM--EKQFKNCRVIPFESGSELNFRDIRIDP 113 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGD 165 + H + + V+ S G D Sbjct: 114 FPITHDTCDPVGFVLESREGRCGSATD 140 >gi|301611547|ref|XP_002935298.1| PREDICTED: protein artemis-like [Xenopus (Silurana) tropicalis] Length = 697 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 58/410 (14%), Positives = 124/410 (30%), Gaps = 46/410 (11%) Query: 69 MAIFITHAHEDHYGAL--HDLWSF----LHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V +Y SP LL Y ++ I Sbjct: 27 RAYFLSHCHKDHMKGLRAPFLKRRLQNSLKVHLYCSPVTKELLLTNPKYAFWENRMISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 ++ + + + H P ++ + + G +++TGD++L + Sbjct: 87 IDTPTQISLVDEATGYKEDVVVTLLPAGH-CPGSVMFLFQGNSGTVLYTGDFRLAKGEVA 145 Query: 175 GDVTDKDSLCAIGN--EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 L GN + I ++ D+T + I + + + I++ + + ++ Sbjct: 146 RME-----LLHSGNRVKDIESVYLDTTFCDPKYYQIPSRE--ECLSGILELVRSWITLSP 198 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 F ++ G + + S + + V + + S R Sbjct: 199 FH------VVWLNCKAAYGYEYLFTNLSEE--FGAKVHVNKLDMFKNMPEILSHITTDRR 250 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 I E + ++ G + + I S G ++ Sbjct: 251 TQIHACRHPVNEEFTRANRMPCGMFSDDGIPLHVISIKPSTIWFGERTRRTNVI------ 304 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE-----LALQ 407 V ++ S H +++K +I+P + A + H E L Sbjct: 305 ---VRTGESSYRACFSFHSSYSEIKDFLGYIKPMNVYANVIPMGKSIEHVEKILKPLCRS 361 Query: 408 EGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 + V + L+ + L D + + + Sbjct: 362 YSDSSVITYKPLGALKRVRCVDSQDTDKSCIDALFDDYPLTHVRNKISRD 411 >gi|218904237|ref|YP_002452071.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|218539157|gb|ACK91555.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 285 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S +I++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFILVDAGMPKCANEI---------ISVAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPEFRWIHTPGHTPGHISLFR 185 >gi|294637715|ref|ZP_06715992.1| hydroxyacylglutathione hydrolase [Edwardsiella tarda ATCC 23685] gi|291089145|gb|EFE21706.1| hydroxyacylglutathione hydrolase [Edwardsiella tarda ATCC 23685] Length = 251 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 70/255 (27%), Gaps = 40/255 (15%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 R +++D GV+ P + ++ + R AI +TH H DH G + ++ Sbjct: 21 QRHCLIVDPGVA------------APVLHYLTENRITPKAILLTHHHNDHVGGVAEIVQA 68 Query: 91 L-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +PVY D++ + + + V + Sbjct: 69 YPDLPVYGPAETRAA-------------GCNQVVADNDRLSLLGLEVTVLAVPGHTLGHV 115 Query: 150 ALVI--RSPVGNIVHTGDWKLDDDAILGDVTD-KDSLCAIGNEGILALMCDSTNAMREGT 206 A G+ + + + + D + + + + C Sbjct: 116 AYYSAPYLFCGDTLFSAGCGRLFEGTAQQMFDSLQRILQLPDN--TLVCCAHEYTESNLR 173 Query: 207 CISEKGIKKNIYDIMKN------AKGCVLVTT---FSSSVSRIRSIIDIAEQIGRKIVLL 257 + + + + AK V T ++ D Q Sbjct: 174 FARHVLPQNRLIETYQQHAAALRAKHQPTVPTTLQIEKEINPFLRCYDDDLQRNVGFPTQ 233 Query: 258 GSSLKRVVSVAIDVG 272 + + RV + D+ Sbjct: 234 PNEIWRVFACLRDMK 248 >gi|149376781|ref|ZP_01894538.1| putative metallo-beta-lactamase family protein [Marinobacter algicola DG893] gi|149358902|gb|EDM47369.1| putative metallo-beta-lactamase family protein [Marinobacter algicola DG893] Length = 465 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 112/375 (29%), Gaps = 51/375 (13%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHV 93 I+IDCG+ ++ + I F + + A+ +TH H DH G + L + Sbjct: 27 ILIDCGLFQGEEAGSSANASDLSIDFPISH---IRALVVTHVHIDHVGRIPYLLAAGFEG 83 Query: 94 PVYASPFAIGLLEAKRVYE-----------------RVSKKIPCISFQAGDKVDVGA--- 133 P+ S + +L + ++ + ++ V G Sbjct: 84 PIICSEPSAIMLPEILEDALKIGFTRDRALIERVLGLIRSRLVPVPYEQWHSVFDGKDES 143 Query: 134 FSIESVRVNHSIPETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 S+ R H + IV +GD +L + + Sbjct: 144 LSVRLQRAGHILGSAYVECEAESDGEFERIVFSGDLGAPHAPLLPEPQPPER-------- 195 Query: 191 ILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI--- 246 ++ +ST ++ E+ + K + + G VLV FS + R + ++ Sbjct: 196 ADRVVIESTYGDKDHESREERRYRLKAVLEHALEDGGTVLVPAFS--IGRTQELLYEIES 253 Query: 247 -AEQIGRKIVLLG---SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 + G V L+ VV + + + + E +++ G Sbjct: 254 LIHEFGSDEVAPDLPWRDLEIVVDS-----PLAATFTRIYRDLKPFWDAEAAELVSQGRH 308 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEV-AIGHIKNRLVEQGVRVIAEDA 361 L + E + + G+ + A G + N L + Sbjct: 309 PLSFEQLTLIDSHEDHLNAVDYLTKSHRPCVVLAGSGMCAGGRVVNYLKAMLASERNDVL 368 Query: 362 ECPVHVSGHPYPNDL 376 G P + L Sbjct: 369 FVGYQAKGTPGRDIL 383 >gi|71042373|pdb|1ZKP|A Chain A, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042374|pdb|1ZKP|B Chain B, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042375|pdb|1ZKP|C Chain C, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042376|pdb|1ZKP|D Chain D, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease Length = 268 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 45 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 92 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 93 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 146 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A I + +V++ D + I Sbjct: 147 GPFSISFLKTVHPVT-CFAXRITAGNDIVVYSADSSYIPEFIPF 189 >gi|328769438|gb|EGF79482.1| hypothetical protein BATDEDRAFT_1998 [Batrachochytrium dendrobatidis JAM81] Length = 346 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 16/141 (11%) Query: 70 AIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 A F+TH H DHYG L + P+Y S L+ + + + + Sbjct: 29 AYFLTHFHSDHYGG---LKKSFNSGPIYCSHITANLVAQQL----GVDRSMLHTIPLNTR 81 Query: 129 VDVGAFSIESVRVNHSIPETMALVI-------RSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ + + NH P ++ ++ N++HTGD+++ Sbjct: 82 TEIQGIQVTFIDANH-CPGSVIILFEIPSVDAMQNNRNVLHTGDFRVHSSHFTHPSFLSK 140 Query: 182 SLCAIGNEGILALMCDSTNAM 202 L + + C+ Sbjct: 141 PLIRLDEIYLDTTYCNPKYIF 161 >gi|260220932|emb|CBA28994.1| hypothetical protein Csp_A09910 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 304 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 80/268 (29%), Gaps = 57/268 (21%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVS-FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 G N + + I++D G FP + P + + ITH+ Sbjct: 32 GGNTTCIEI-RTDNNELIILDAGTGIFPLSQTLLAE--MP----VTAN------VLITHS 78 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGL-----------LEAKR-----------VYERV 114 H DH L +P + + L +E E + Sbjct: 79 HWDHIQGLPFFIPNF-IP--GN--TLRLHGGFDPVSGKGIEQVMAVQLQYSYFPVREEEM 133 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL------ 168 +I ++ + +G+ ++ +NH + + I ++ TGD + Sbjct: 134 KARIEYVTLMPDQPIQIGSATVTPCLLNHPVVD-FGYRIECNGKSVFFTGDHEPPYNIYE 192 Query: 169 --DDDAILGDVTDKDSLCAI--GNEGILALMCDSTNAMREGTC---ISEKGIKKNIYDIM 221 D+ + +I +G+ + D++ E +I Sbjct: 193 LGDEGFADYQAFVDEKNKSILEAIKGVDVYIADTSYTDAEYPAKKGWGHGTFSTSI--AS 250 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +A G ++ +R +++A Sbjct: 251 AHAAGAKVLFCTHHEPTRSDDALEMAFA 278 >gi|242049406|ref|XP_002462447.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor] gi|241925824|gb|EER98968.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor] Length = 963 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 111/322 (34%), Gaps = 37/322 (11%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K +K+ + Sbjct: 656 FLTHFHVDHYQGLT--RSFCHGKIYCSSITASLVHHKI----GIPWDRLHVLTLNEKLTI 709 Query: 132 GAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 G S+ NH P ++ ++ P ++HTGD++ + V + + Sbjct: 710 GGVSLTCFDANH-CPGSIIILFEPPNGKAVLHTGDFRFSSEMANNPV--------LQSSH 760 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS-SVSRIRSIIDIAE 248 I L+ D+T R E I+ I I A + S ++ + R +++A Sbjct: 761 IHTLILDTTYCNPRYDFPSQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLFMEVAR 820 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +KI + + L+ + + + I+ ++ + P L + Sbjct: 821 LLQKKIYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPMWTLA------SFKRMKY 874 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 L+ G+ + F + +QG + E S Sbjct: 875 LSNQYAGQFDLIVAFCPTGWAFG--------KGRKKTPGKRWQQGSIIRYEVP-----YS 921 Query: 369 GHPYPNDLKRMYQWIRPQVLVA 390 H +L+ ++I P+ ++ Sbjct: 922 EHSSFTELQEFVKFISPEHIIP 943 >gi|330805557|ref|XP_003290747.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum] gi|325079097|gb|EGC32714.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum] Length = 341 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 108/326 (33%), Gaps = 47/326 (14%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY + W+F + +Y + L+ K K +V Sbjct: 27 FLTHFHSDHYTGITKTWAFGN--IYCTEETGRLVSHKL----GVDKKYIKGISFNKTFEV 80 Query: 132 GAFSIESVRVNHSIPETMALVIRSPV-----GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + + NH P + ++ + NI+HTGD++ + Sbjct: 81 EGVKVTFLDANH-CPGSAIVLFEVKMPNGEIENILHTGDFRYHPSMKQYPH--------L 131 Query: 187 GNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS-VSRIRSIID 245 + I L D+T E T + I K + DI++ + F + + + + +++ Sbjct: 132 EGKEISKLYLDNTFCNPEYTFPPQHEIIKQVKDIVRKENNGKTLFLFGTYVIGKEKILLE 191 Query: 246 IAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 +++Q G+ I + + + + P + + G + Sbjct: 192 VSKQEGKPIGVTKEKFE-------ILNCLDSIDQTKFTLDLTCTPFRAVSMGLLG--FQS 242 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 L + S G+ V S ++I +G V V Sbjct: 243 MMNLLEESNGKYTKVIGFRPTGWSQSKKSIT------------YQNRGPTVFYS-----V 285 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAI 391 S H N+L+ +RP+ ++ Sbjct: 286 AYSEHSSFNELRDCIDQLRPKEIIPT 311 >gi|238852960|ref|ZP_04643359.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri 202-4] gi|238834410|gb|EEQ26648.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri 202-4] Length = 265 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N L + + I++D G+S K GVD+ Sbjct: 1 MKVSVLSSGSTG----NSTLIE----TPQHKILMDAGLSGKKTKELLAQVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKK 117 K++ +FI+H H DH G L L + YA+ L+E+ ++ Sbjct: 47 ------KDIDMVFISHDHTDHSGGLGVLMRRYPKISAYANSGTWNYLIESNKI--GKLPV 98 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 +F++G G + S +H + V S D + G++ Sbjct: 99 EQINTFESGITKTFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEI 158 Query: 178 TD 179 D Sbjct: 159 KD 160 >gi|157692976|ref|YP_001487438.1| hypothetical protein BPUM_2209 [Bacillus pumilus SAFR-032] gi|157681734|gb|ABV62878.1| hypothetical protein BPUM_2209 [Bacillus pumilus SAFR-032] Length = 214 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 25/167 (14%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK +PLG V N + ++ D G + I++ Sbjct: 1 MKMNWRR-MPLGYVQ---ANAY---IWKNEHGECLIFDPG---GEAQKL--------ISY 42 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP-----FAIGLLE--AKRVYER 113 + +++ +A+ +THAH DH GA ++ + VP+Y L A+ + Sbjct: 43 VKEKQLTPLAVLLTHAHFDHIGAADEVRAEWGVPLYVHENEKEWLTNAELNGSARLIGNG 102 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 ++ K + + +G+F++E P +++ I Sbjct: 103 ITVKEAEKLITSEGTLQIGSFTLEMFHTPGHSPGSVSYYSAEEGFVI 149 >gi|319651536|ref|ZP_08005664.1| YqgX protein [Bacillus sp. 2_A_57_CT2] gi|317396851|gb|EFV77561.1| YqgX protein [Bacillus sp. 2_A_57_CT2] Length = 211 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 58/162 (35%), Gaps = 29/162 (17%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDD--LPGVDLVFPDITFIMKERK 66 +PLG + N + ++ ++ D G ++ L G+ I ++ Sbjct: 6 IPLGPLQ---TNCYVLS---NETKDCLIFDPG----EESGKLSGI---------IEQKGL 46 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASP------FAIGLLEAKRVYERVSKKIPC 120 +A+ +THAH DH GA+ ++ +PVY L + K Sbjct: 47 KPLAVILTHAHFDHIGAVDEIRDAFSIPVYIHEKEAAWLPDPALNGSHLFKIGKLIKARP 106 Query: 121 --ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 ++ +G F+++ + P +++L + Sbjct: 107 ADHIITGEQELSIGEFNLKILETPGHSPGSISLYFEDADLVV 148 >gi|325662330|ref|ZP_08150939.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086133|ref|ZP_08335215.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471332|gb|EGC74555.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406292|gb|EGG85806.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 207 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 9/143 (6%) Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 F+ +E A+ +TH H DH L L VPVY GL+ + ++ Sbjct: 40 EFLREEGLKPQAVLLTHGHFDHIMGLDALLEEYPVPVYVHEAEKGLIADPKTNLSLTYTN 99 Query: 119 PCISFQ-----AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDD 171 + G K+ + E + + N++ +GD ++ Sbjct: 100 GYVFEDATYVTDGQKIAAAGVTFEVLFTPGHTSGGCCYYAETE--NMLFSGDTLFRCSVG 157 Query: 172 AILGDVTDKDSLCAIGNEGILAL 194 D+ +L E +L L Sbjct: 158 RSDLPTGDETTLIRSIKEKLLVL 180 >gi|255690069|ref|ZP_05413744.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] gi|260624346|gb|EEX47217.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] Length = 252 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 74/242 (30%), Gaps = 45/242 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETEDARILIDCG---------------PDFREQVLHLPFEKIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSI 136 DL F VP+YA + L ++ IP AG + + Sbjct: 85 DLRPFCQFGSVPIYAEEYVARGLRSRMPYCFVEHSYPGVPNIPLQEIVAGQPFYINHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L G+ L+ Sbjct: 145 LPLRVMH----GRLPILGYRIGKLGYITD------MLTMPEESYEQLA-----GVDVLIV 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + ++ + + S + + + + + Sbjct: 190 ---NALRIAPHPTHQNLEAALAVARRIQAKKTYFIHMSHDMG-LHAEAERRLPENIHLAF 245 Query: 257 LG 258 G Sbjct: 246 DG 247 >gi|327440603|dbj|BAK16968.1| Zn-dependent hydrolase, including glyoxylase [Solibacillus silvestris StLB046] Length = 278 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 12/78 (15%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYG 82 Y P S +++ID G+ +++ I+ K AI +TH H DH G Sbjct: 44 YSCPGSNDFVLIDAGMPKSAEEI---------ISVAEKRFGKNAKAKAIILTHGHFDHVG 94 Query: 83 ALHDLWSFLHVPVYASPF 100 A+ +L VPV+A Sbjct: 95 AIIELVEHWQVPVFAHKL 112 >gi|303237770|ref|ZP_07324329.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] gi|302482056|gb|EFL45092.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] Length = 258 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 40/240 (16%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + + I+IDCG F + LP P + + I +TH H DH G + DL Sbjct: 45 VETDQTRILIDCGPDFRQQILP-----LPY--------RKIDGILVTHIHYDHVGGIDDL 91 Query: 88 WSFL---HVPVYASPFAIGLLEAKRVYERVSKKIPCIS------FQAGDKVDVGAFSIES 138 + + ++ + L Y P + Q + +G +I+ Sbjct: 92 RPYCWLGDIDIFTNEDTCQGLRHNLPYCFKENPYPGVPVLNLHAVQPHEVFTIGDCAIQP 151 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS 198 + V H ++ +G +V+ D + L + EGI L+ + Sbjct: 152 IEVMH----GRLPILGYRIGKLVYITD---------MKTINPSELPYL--EGIETLVVSA 196 Query: 199 TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 +E S + IK I + +T + + + + G Sbjct: 197 LRWEKEHH--SHQLIKDAIAFSQQIHAKQTYLTHLTHQIG-LHDDASNLLPENVHLAYDG 253 >gi|325283677|ref|YP_004256218.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324315486|gb|ADY26601.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 313 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 W+++D G +PG + + + AI +TH H DH GALHDL Sbjct: 44 GEPGGPWVLVDAG-------MPGTAELILRAAREIHGARPPAAIVMTHGHFDHVGALHDL 96 Query: 88 WSFLHVPVYASPF 100 VPVYA Sbjct: 97 LRHWPVPVYAHEL 109 >gi|255321269|ref|ZP_05362435.1| metallo-beta-lactamase family protein [Acinetobacter radioresistens SK82] gi|262380047|ref|ZP_06073202.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301823|gb|EET81074.1| metallo-beta-lactamase family protein [Acinetobacter radioresistens SK82] gi|262298241|gb|EEY86155.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 214 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ +++ I+ID G + ++ N+ A+++TH H D Sbjct: 15 NCSIV--WDAETKEAILIDAG---GDAEKLKAEV--------EALGINVKALWLTHGHLD 61 Query: 80 HYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVG 132 H GA+ +L + VPV F + +++ P Q G+ + +G Sbjct: 62 HAGAVGELANTWDVPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGETLKLG 121 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 E P ++ + ++ TGD TD Sbjct: 122 KSEFEVRFTPGHTPG--HVIFYNAQHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|291299062|ref|YP_003510340.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290568282|gb|ADD41247.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 252 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 60/220 (27%), Gaps = 55/220 (25%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK--NLMAIFITHAHEDHYG 82 Y + +++D G G + + L AI +TH H DH Sbjct: 21 SYLVEADGYTLLLDFG-----SGSLGA---------LQRHTDPYKLDAILLTHLHADHIM 66 Query: 83 -ALHDLW--------SFLHVPVYASPFAIGLLEAKRVYERV---------SKKIPCISFQ 124 A + F VP+Y E + + + Sbjct: 67 DACPYVVMRRYAPGAPFPQVPLYGPEGT----ERRLAAAYGGAGEAACPSLSDVYDVHTL 122 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++G + +V H I ET + I +V++ D + L Sbjct: 123 QPSTFNMGPLKVTVDKVCHPI-ETYGVRIEHDGRTLVYSSDTG--------QCEVLERLA 173 Query: 185 AIGNEGILALMCDSTNAM----REGTCISEKGIKKNIYDI 220 G +C+++ G ++ + + Sbjct: 174 KKG----DVFLCEASYLEGRPNPPGVHLTGREAGECATKA 209 >gi|229075113|ref|ZP_04208109.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] gi|228708008|gb|EEL60185.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] Length = 285 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 12/83 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYG 82 +GSP + ++++D G+ D++ I+ AI +TH H DH G Sbjct: 44 FGSPQANDFVLVDAGMPKSADEI---------ISVAEDRFGANSRPKAIILTHGHFDHVG 94 Query: 83 ALHDLWSFLHVPVYASPFAIGLL 105 + +L VPVYA I L Sbjct: 95 GIIELVKHWDVPVYAHQMEIPFL 117 >gi|163853551|ref|YP_001641594.1| beta-lactamase domain-containing protein [Methylobacterium extorquens PA1] gi|163665156|gb|ABY32523.1| beta-lactamase domain protein [Methylobacterium extorquens PA1] Length = 299 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G+ R W+++D G+ P E AI +TH H D Sbjct: 42 NVVFVGFPGAGDRNWVLVDAGI--PGSKAAIRSAAAARFG----EGARPAAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G L DL PVYA Sbjct: 96 HVGVLEDLAEEWDAPVYAHGL 116 >gi|329955847|ref|ZP_08296650.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] gi|328525227|gb|EGF52277.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] Length = 254 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 79/255 (30%), Gaps = 50/255 (19%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 +L L G GV EIG + + I+IDCG Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADLRDNRLRASALLHTDDATILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAI 102 PD M + + + ITH H DH G L DL F +P+Y+ + Sbjct: 53 -------PDFRTQMLRAAVYERIDGVLITHEHYDHVGGLDDLRPFCRFSEIPIYSDAYTA 105 Query: 103 GLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIV 161 L + Y V KK P + +V+ G FS+ I Sbjct: 106 AHLRVRMPYCFVDKKYPGVPRIYLREVEAGKPFSV------------RGTEILPVAVMHG 153 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 LG VTD ++ E + L NA+R + + I + + Sbjct: 154 RLPILGYRIGGRLGYVTDMLTMPDASYEQLQGLDVLVINALRPQPHPTHQSISEALAAAE 213 Query: 222 KN-AKGCVLVTTFSS 235 + AK + Sbjct: 214 RIGAKETYFIHMSHH 228 >gi|15615383|ref|NP_243686.1| hypothetical protein BH2820 [Bacillus halodurans C-125] gi|10175441|dbj|BAB06539.1| BH2820 [Bacillus halodurans C-125] Length = 211 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 73/199 (36%), Gaps = 41/199 (20%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I+ D G + + IT++ + +AI +THAH DH GA+ D+ + Sbjct: 21 DQGEGIIFDPG---GEVEKL--------ITWLRDRQITPLAILLTHAHFDHIGAVEDVRN 69 Query: 90 FLHVPVY---------------ASPFAI--GLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 H+PVY S I ++A+ ++ + + +G Sbjct: 70 TFHIPVYIHENEKEWLIDPQRNGSSLFIPGSSIKAREAEHLITGE---------QDLSIG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEG 190 +FS + + P +++ + IV +GD D L ++ Sbjct: 121 SFSYQVLETPGHSPGSLSYY--AKEDKIVFSGDALFAGSIGRTDLPGGDHQLLLDSIHDK 178 Query: 191 ILALMCDSTNAMREGTCIS 209 +L L D+T A G + Sbjct: 179 LLELPEDTTVASGHGPTTT 197 >gi|196042743|ref|ZP_03109982.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|229185316|ref|ZP_04312500.1| Metallo-beta-lactamase [Bacillus cereus BGSC 6E1] gi|196026227|gb|EDX64895.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|228598236|gb|EEK55872.1| Metallo-beta-lactamase [Bacillus cereus BGSC 6E1] Length = 285 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S +I++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFILVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPE-TMALVIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHIPDFRWIHTPGHTPGHISLFR 185 >gi|89898551|ref|YP_515661.1| beta-lactamase superfamily metal dependent hydrolase [Chlamydophila felis Fe/C-56] gi|89331923|dbj|BAE81516.1| metal dependent hydrolase of the beta-lactamase superfamily I [Chlamydophila felis Fe/C-56] Length = 271 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 22/81 (27%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGAL- 84 + K +ID G PD + + L +F+TH H DH G + Sbjct: 49 VEWAEKKFLIDVG---------------PDFRQQMLENNIQKLDGVFLTHPHYDHIGGID 93 Query: 85 ----HDLWSFLHVPVYASPFA 101 + +PV S F Sbjct: 94 DLRVWYVLHQRSLPVVLSAFT 114 >gi|309388963|gb|ADO76843.1| beta-lactamase domain protein [Halanaerobium praevalens DSM 2228] Length = 208 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 22/152 (14%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + K ++ID P + + ++ + L I TH H DH GA Sbjct: 15 CYILSENGKALIID-----PGAEGEKI------YNYLKENNLKLKYIINTHGHFDHIGAN 63 Query: 85 HDLWSFLHVPVYASP--------FAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 L + + A P ++ L E ++ + + GD ++ ++ Sbjct: 64 QFLKTKTDAKILAHPKANLKFEDPSLNLSTI-LKREEITSPALDRALKDGDSINFEGLNL 122 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 E + + +++ ++ ++ +GD Sbjct: 123 EIITTPGHSEDGISIYLKEKA--MLFSGDCIF 152 >gi|295706588|ref|YP_003599663.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] gi|294804247|gb|ADF41313.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] Length = 210 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 24/153 (15%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +PLG + N + + ++ ++ D G G LV F+ K+ Sbjct: 6 IPLGPIQ---TNCYVV---ANEKKECLVFDPGAQ-------GKQLV----QFLEKQTYKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG-LLEAKRVYERVSKKIPCISFQAGD 127 +AI +THAH DH G + ++ + +P+Y L + + + A D Sbjct: 49 LAILLTHAHFDHIGGVDEVMNHYSIPLYVHKNEKEWLHNSDLNGSKFFDLGEITAPDATD 108 Query: 128 KV------DVGAFSIESVRVNHSIPETMALVIR 154 + +G+F E P +++ + Sbjct: 109 IISIEGNLTIGSFQFEVYETPGHSPGSVSYYFK 141 >gi|229016385|ref|ZP_04173328.1| Beta-lactamase domain protein [Bacillus cereus AH1273] gi|229022614|ref|ZP_04179140.1| Beta-lactamase domain protein [Bacillus cereus AH1272] gi|228738705|gb|EEL89175.1| Beta-lactamase domain protein [Bacillus cereus AH1272] gi|228744905|gb|EEL94964.1| Beta-lactamase domain protein [Bacillus cereus AH1273] Length = 244 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E + I++ + + V Sbjct: 69 GVLQYARLIMSGAKGQLPEL--PIYGHSFD----ENGFHSLTHAPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 165 >gi|188583823|ref|YP_001927268.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179347321|gb|ACB82733.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 299 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G R W+++D G+ P E AI +TH H D Sbjct: 42 NVVFVGSPGAGDRNWVLVDAGI--PGSKAAIRRAAEARFG----EGARPSAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G L DL VPVYA Sbjct: 96 HVGVLEDLAEEWDVPVYAHEL 116 >gi|255010441|ref|ZP_05282567.1| putative hydrolase [Bacteroides fragilis 3_1_12] gi|313148245|ref|ZP_07810438.1| hydrolase [Bacteroides fragilis 3_1_12] gi|313137012|gb|EFR54372.1| hydrolase [Bacteroides fragilis 3_1_12] Length = 252 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 90/281 (32%), Gaps = 60/281 (21%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 ++ L G GV EIG A+ P + +++DCG Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPKDHRLRTSALVQTGDATLLLDCG-------- 52 Query: 49 PGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAIG 103 PD + + A+ I+H H DH G L DL F VP+YA + Sbjct: 53 -------PDFREQMLHVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPIYAETYTAE 105 Query: 104 LLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 L ++ IP + V + +RV H ++ + Sbjct: 106 RLRSRMPYCFVEHTYPGVPNIPLREIEPNRPFLVNHTEVLPLRVMH----GKLPILGYRI 161 Query: 158 GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNI 217 G + + D + D +S + +G+ L+ NA+R + + + + + Sbjct: 162 GKLGYITDMLT--------MPD-ESFEQL--QGVDVLVM---NALRVAPHNTHQSLSEAL 207 Query: 218 YDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + S + +++ ++ G Sbjct: 208 EAVKRIGAKETWFIHMSHHIG-LQADVEKLLPPHVHFAFDG 247 >gi|229149396|ref|ZP_04277632.1| Beta-lactamase domain protein [Bacillus cereus m1550] gi|228634038|gb|EEK90631.1| Beta-lactamase domain protein [Bacillus cereus m1550] Length = 244 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I + + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + G +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDGAVVYSADSSYIPEFIPF 165 >gi|315231189|ref|YP_004071625.1| metal-dependent hydrolase [Thermococcus barophilus MP] gi|315184217|gb|ADT84402.1| metal-dependent hydrolase [Thermococcus barophilus MP] Length = 251 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 11/201 (5%) Query: 56 PDITFIMKERK-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV 114 PD+ + ++ ++ +FITHAH DH L +L F V Y+ +A+ + + Sbjct: 53 PDLHYHLEHLNMDVKRVFITHAHFDHIAGLPELQIFKGVKFYSHEYAVNTAKHLQELFLG 112 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + I + D G ++ I VI I TGD Sbjct: 113 ERDWEYIPLEFNRWYDFGFRVYHFPTIHQPIKAAGGFVIEIGKKKIAITGDTG------P 166 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + D++++ +G L+ + T + + G++ I K + S Sbjct: 167 EILGDENAIEI--MKGSDLLIAEMT--KKHSVPKTHLGVEDAIKLAQKVEAKKTVFAHIS 222 Query: 235 SSVSRIRSIIDIAEQIGRKIV 255 S + D+ G I Sbjct: 223 HSNYTQERLEDMVRDHGYIIA 243 >gi|126653941|ref|ZP_01725780.1| YqgX [Bacillus sp. B14905] gi|126589544|gb|EAZ83685.1| YqgX [Bacillus sp. B14905] Length = 214 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 36/158 (22%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ I+ D G ++ + + +AIF+THAH D Sbjct: 15 NCYIVS---NKDKECIVFDPG----EEAERLIKTI-------RSNGLKPLAIFLTHAHFD 60 Query: 80 HYGALHDLWSFLHVPVY----------------ASPFAIGLLEAKRVYERVSKKIPCISF 123 H GA+ + +VPV+ +S +A RV+ Sbjct: 61 HIGAVDAVREAFNVPVWIHEKEVSWLGDPEKNGSSKYAA------LPDYRVAAPDQDTII 114 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + + ++ F ++V P +++ V + IV Sbjct: 115 KKEQQFEISNFVFQAVFTPGHSPGSISYVFENDGFAIV 152 >gi|242240259|ref|YP_002988440.1| hydroxyacylglutathione hydrolase [Dickeya dadantii Ech703] gi|242132316|gb|ACS86618.1| hydroxyacylglutathione hydrolase [Dickeya dadantii Ech703] Length = 250 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 58/208 (27%), Gaps = 40/208 (19%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 Y + + +++D G P ++ I K + N AI +TH H DH G Sbjct: 13 YIWLLEHENQCVIVDPG----DAS--------PVLSAIEKRQLNPAAILLTHHHNDHTGG 60 Query: 84 LHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN 142 + L +PVY +K G + + Sbjct: 61 VTALKERFASIPVYGPEET-------------RQKGATQIVHEGGVILLLGSEFSVF--- 104 Query: 143 HSIPETMALVIRSPVGNIVHTGDW-------KLDDDAILGDVTDKDSLCAIGNEGILAL- 194 S+P A + + GD ++ + L + +E ++ Sbjct: 105 -SVPGHTAGHLAYYSAPYLFCGDTLFSAGCGRIFEGTPEQMWGSVSRLAQLPDETLVCCA 163 Query: 195 --MCDSTNAMREGTCISEKGIKKNIYDI 220 S E I+ + I Sbjct: 164 HEYTQSNLEFAHHIWPEETDIRDYLLKI 191 >gi|157129880|ref|XP_001661798.1| DNA cross-link repair protein pso2/snm1 [Aedes aegypti] gi|108872037|gb|EAT36262.1| DNA cross-link repair protein pso2/snm1 [Aedes aegypti] Length = 778 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 108/335 (32%), Gaps = 49/335 (14%) Query: 64 ERKNLMAI---FITHAHEDH-YGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 ++ + F++H H DH G L P+ SP L++A E + Sbjct: 376 RYGDIEGVSHYFLSHFHADHYIG----LKRSFAKPLIMSPITSRLVKAFINVE----ESY 427 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVT 178 + + + I ++ NH P + + + P NI+HTGD++ + + + Sbjct: 428 YQLIDLHETIVIDNVRITALDANH-CPGAVMFLFQLPTGTNILHTGDFRA--SSEMEEYP 484 Query: 179 DKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + ++ I + + S A + + +N VL+ S + Sbjct: 485 EFWNM-EIHSIYLDTTYLSSKYAFKSQWESITDACDVVRTILNRNIGARVLIVCGSYLIG 543 Query: 239 RIRSIIDIAEQIGRKIVLLG--SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIV 296 + + ++A Q K+ V + + +D F + Sbjct: 544 KEKVWAELAAQFNYKVWTEPNRRKALVAVDDPLQQQWLVEDPKFADIHVLSMNKL----- 598 Query: 297 IATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRV 356 S E S + Q + L G E + + V Sbjct: 599 ----SYDELVSYVEQFPDRYDLLIALRP-----------SGWEKNSRP---QYRGRINIV 640 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 E S H N+LKR +++RPQ +++ Sbjct: 641 GVE-------YSEHSSFNELKRFVRYLRPQEVIST 668 >gi|91216317|ref|ZP_01253284.1| putative hydrolase [Psychroflexus torquis ATCC 700755] gi|91185455|gb|EAS71831.1| putative hydrolase [Psychroflexus torquis ATCC 700755] Length = 258 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 73/267 (27%), Gaps = 62/267 (23%) Query: 1 MKNEELVFLPLG-----GVGEIG--------MN----MALYGYGSPSSRKWIMIDCGVSF 43 MKN L LG GV IG N +IDCG Sbjct: 1 MKNNVLKVTFLGTGTSQGVPIIGSDHPVCLSKNPKDKRLRVSVLLEWEDFSYVIDCG--- 57 Query: 44 PKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYA 97 PD + K + I TH H DH L + ++ +Y+ Sbjct: 58 ------------PDFRQQMLANNVKKIDGILFTHEHNDHVIGLDDIRPFYFRQGNISIYS 105 Query: 98 SPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 + L+ + + + +G + + V H PE Sbjct: 106 HKRVLESLKQRFQYVFETENKYPGAPTLDTTIIDDSPFLIGNKEVIPMNVYH--PELQVY 163 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 R V D++ + L +G+ L+ NA+R+ S Sbjct: 164 GFRFGDFAYVTDAKIIPDEE--------LEKL-----KGVKTLV---LNALRKEEHRSHL 207 Query: 212 GIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + + + T S + Sbjct: 208 NLSQALDVVDYLKPERAYFTHISHHMG 234 >gi|297625453|ref|YP_003687216.1| Beta-lactamase-like [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921218|emb|CBL55768.1| Beta-lactamase-like [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 214 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 62/168 (36%), Gaps = 28/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 +P G N + S+ + +++D G P L+ ++ ++ Sbjct: 7 VPFGSYQ---ANCYVL----TSAGRALVVDPGAEAP--------LLLA---WLAGR--DV 46 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPF-AIGLLEAKR---VYERVSKKIPCISF- 123 + + +TH+H DH GA +++ VP+ A + + E + I Sbjct: 47 VGVVLTHSHSDHIGAANEVARAFGVPIMCGRADAAAMADPHLTGFDEEGSDYAVTRIDRA 106 Query: 124 -QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 GD ++ G +++ + P + + + S ++ TGD Sbjct: 107 LDEGDLIEFGDDTVQVLETPGHTPGS--ICLWSSAQGVLLTGDTLFAQ 152 >gi|228934364|ref|ZP_04097203.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825532|gb|EEM71326.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 285 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPGFRWIHTPGHTPGHISLFR 185 >gi|259417676|ref|ZP_05741595.1| metallo-beta-lactamase domain protein [Silicibacter sp. TrichCH4B] gi|259346582|gb|EEW58396.1| metallo-beta-lactamase domain protein [Silicibacter sp. TrichCH4B] Length = 356 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 26/144 (18%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 ++DCG P+ + F K + A+F+TH H DH G +P+ Sbjct: 28 LLDCGFG-PE----------ANANFDPKWLDGVDAVFVTHDHIDHIGGAAYAVEA-GLPI 75 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 YA+ + + + + + + R H++ Sbjct: 76 YATRRT---------SQALPPSAQVRELPERGETLIDGIRLTTGRNGHALGGVWFHF--D 124 Query: 156 PVGNIVHTGDWKLDDDAILGDVTD 179 + ++GDW D Sbjct: 125 LGEGLFYSGDWSE---ESDWFAFD 145 >gi|300741331|ref|ZP_07071352.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia dentocariosa M567] gi|300380516|gb|EFJ77078.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia dentocariosa M567] Length = 295 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 72/233 (30%), Gaps = 38/233 (16%) Query: 20 NMALYGYGSPSSRKW-IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + L + W +++D G + GV +I + AI I+H H Sbjct: 20 SCYLLSATDYAGHTWRVLMDMG-----NGSLGVLQ-----RYID--LAEIDAILISHLHP 67 Query: 79 DHY---GAL-------HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC------IS 122 DH L W +P+Y + E + + Sbjct: 68 DHCIDLSGLHVAVKWDPRGWPKGRIPLYGP---AAINEYLSATHGLDPDPGMSTEFEYHT 124 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDW-KLDDDAILGDV 177 + G KV++G F++E RV H + AL I + ++GD D Sbjct: 125 WDEGHKVEIGPFTVEPFRVLHPAKDPYALRITCNSRDGRTLFAYSGDTDTCDGLIKAARG 184 Query: 178 TDKDSLCAIGNEGI-LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 D A EG AL R G E G++ + + + Sbjct: 185 ADLFLCEAAYQEGRDDALRGIHLTGKRAGEAAQEAGVRNLLLTHLPVWNDPDI 237 >gi|29346777|ref|NP_810280.1| putative hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|29338674|gb|AAO76474.1| hydrolase, metal-dependent [Bacteroides thetaiotaomicron VPI-5482] Length = 252 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETEDARILIDCG---------------PDFRAQVLHLPFEKIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + +++VG + Sbjct: 85 DLRPFCRFGAVPIYAEEYVARALRLRMPYCFVDHRYPGVPDIPLQEIEVGHAFSIHHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + EGI L+ Sbjct: 145 VPLRVMH----GRLPILGYRIGRLGYITDMLTMPEESYEQL-----------EGIDVLIM 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + +++ + + S + + ++ + Sbjct: 190 ---NALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHDMG-LHKKVEKELPENIHLTY 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGMEII 251 >gi|99080382|ref|YP_612536.1| beta-lactamase-like [Ruegeria sp. TM1040] gi|99036662|gb|ABF63274.1| beta-lactamase-like protein [Ruegeria sp. TM1040] Length = 356 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 23/137 (16%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 ++DCG + D +++ + A+F+TH H DH G +P+ Sbjct: 28 LLDCGFGPEANATF-------DPDWLIG----VDAVFVTHDHIDHIGGAAYAVEA-GLPI 75 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 YA+ L I+ + + + + R H++ Sbjct: 76 YATRRTAQAL---------PPSAQVIALPEQGETHLDGICLTTGRNGHALGGVWMHF--D 124 Query: 156 PVGNIVHTGDWKLDDDA 172 + ++GDW + Sbjct: 125 LGAGLFYSGDWSEESQW 141 >gi|298488024|ref|ZP_07006061.1| Metallo-beta-lactamase family protein, RNA-specific [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157303|gb|EFH98386.1| Metallo-beta-lactamase family protein, RNA-specific [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 478 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 81/269 (30%), Gaps = 57/269 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDL----PGVDLVFPDITFIMKERKN 67 G V + + + S+ ++IDCG S + G D + Sbjct: 10 GAVDTVTGSCHQLCMDASSN---LLIDCG-SVQERGERAASFGFD------------PET 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 54 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 113 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V H I + + +V Sbjct: 114 YLELINKRIIALPFDNWFSLVEHEKLHCRVRLQRAGHILGSAYIECDLHYPAQGRSLRVV 173 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 174 FSGDLGASHTPFLP--------APKPPERADVLILESTYGDRLHEDRSIRQQALEQIIDK 225 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 226 ALEDNGTVLIPAFS--IGRTQELLYELED 252 >gi|289677168|ref|ZP_06498058.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Pseudomonas syringae pv. syringae FF5] Length = 477 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 80/270 (29%), Gaps = 57/270 (21%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGV-----SFPKDDLPGVDLVFPDITFIMKERK 66 G V + + SS ++IDCG + G D + Sbjct: 10 GAVDTVTGSCHQLHIDVSSS---LLIDCGSVQERGRQSESASFGFD------------PE 54 Query: 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIP 119 + A+ I+H H DH G + +L + P+ S + LL K + ++ Sbjct: 55 AIRALLISHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDLLKIEFAHDPGQVA 114 Query: 120 CISFQAGDKVDVGAFSIES--------------VRVNH-----SIPETMALVIRSPVGNI 160 ++ F R H I + ++ + Sbjct: 115 RYLDVINKRIIALPFDDWFSLIDNESVHCRVRLQRAGHILGSAYIECDLQYPVQGRSVRV 174 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYD 219 V +GD L E L+ +ST R + + + + I D Sbjct: 175 VFSGDLGASHTPFLP--------APKPPERADVLVLESTCGNRVHEDRNIRQLGLERIID 226 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 227 KALEDNGTVLIPAFS--IGRTQELLYELED 254 >gi|284097296|ref|ZP_06385433.1| metallo-beta-lactamase family protein [Candidatus Poribacteria sp. WGA-A3] gi|283831194|gb|EFC35167.1| metallo-beta-lactamase family protein [Candidatus Poribacteria sp. WGA-A3] Length = 434 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 6/105 (5%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 + + + L + +TH H DH G L + S VPVY LL K + Sbjct: 280 LAERQATLAGVCLTHGHMDHAGGLDRILSEWPVPVYLGEGDFPLLPWK------PPQASL 333 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + VG +E + P + +++ + GD Sbjct: 334 VVTGDARVLAVGDLGVECLATPGHTPGGICYRVQTQGRALCFVGD 378 >gi|238922252|ref|YP_002935766.1| hydroxyacylglutathione hydrolase [Eubacterium eligens ATCC 27750] gi|238873924|gb|ACR73632.1| hydroxyacylglutathione hydrolase [Eubacterium eligens ATCC 27750] Length = 207 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 18/148 (12%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +G + N L + + + I++D P D + +++ AI + Sbjct: 9 LGPVATNCYLI--INKDNNESIIVD-----PADSPESI------YDMVVRSASKPQAILL 55 Query: 74 THAHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVS-KKIPCISFQAGDK 128 TH H DH GA +++ + +YAS +S + + GD Sbjct: 56 THGHFDHIGAANEVREHYGIKIYASCDEEKLLASPARNLSNAYGMSLRVTADVLHNDGDI 115 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSP 156 +++ I+++ I S Sbjct: 116 LELAGLKIKAIHTPGHTAGGTCYYIESD 143 >gi|153952693|ref|YP_001393458.1| hydrolase [Clostridium kluyveri DSM 555] gi|219853364|ref|YP_002470486.1| hypothetical protein CKR_0021 [Clostridium kluyveri NBRC 12016] gi|146345574|gb|EDK32110.1| Predicted hydrolase [Clostridium kluyveri DSM 555] gi|219567088|dbj|BAH05072.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 287 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 8/139 (5%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + K +IDCG+++ L +I ++ + + L I ++H+H DH A+ Sbjct: 17 FLILGKDKTALIDCGMAYCASSL------IRNIQQVLNDERKLDYILLSHSHYDHISAVP 70 Query: 86 DLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L V V A+ +A +L K + K++ S + + ++V+H Sbjct: 71 YLRKVWPDVKVMAAEYAQNILTKKSAL-KTIKELNNQSVLYYGSSQLIDYDDTLMKVDHK 129 Query: 145 IPETMALVIRSPVGNIVHT 163 I E +L + + +++ T Sbjct: 130 ISEGDSLNLGNTNIDVLET 148 >gi|126700357|ref|YP_001089254.1| putative hydrolase [Clostridium difficile 630] gi|255101913|ref|ZP_05330890.1| putative hydrolase [Clostridium difficile QCD-63q42] gi|255307782|ref|ZP_05351953.1| putative hydrolase [Clostridium difficile ATCC 43255] gi|115251794|emb|CAJ69629.1| putative hydrolase beta-lactamase-like [Clostridium difficile] Length = 204 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 25/180 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G+N + G ++K +ID G S + ++F+ + N+ I +TH H Sbjct: 12 GVNTYVL--GDEKTKKCAVIDPGGSLVET-----------LSFVKENELNIEYIILTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDV 131 DH G + D+ V A LL K + I DK+++ Sbjct: 59 GDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVNDKDKLEL 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G + + M + + + TGD D + + + Sbjct: 119 GELKMTFLHTPGHTQGCMCIRVEDE----MFTGDTLFAGSIGRTDLYSGDFNQMEKSLKK 174 >gi|289523396|ref|ZP_06440250.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503088|gb|EFD24252.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 214 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 49/168 (29%), Gaps = 27/168 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPD--ITFIMKERK 66 PLG + G L +D PG D PD I I Sbjct: 6 FPLGALFANG---YLV---YDEDGNAFFVD----------PGGD---PDDVIAVIEGNSL 46 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPC 120 L I +TH H DH + L PV G+L E V Sbjct: 47 ELKIILLTHGHVDHIAGVKALQDRYDCPVAVHEDDSGMLANPMKNLSQFAGESVKVDGRV 106 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 G+ +++G+ I + P ++ ++ +GD Sbjct: 107 KPLSDGESINIGSILIRVIHTPGHTPGSVCYRASHEGEEVLFSGDTIF 154 >gi|260173816|ref|ZP_05760228.1| putative hydrolase [Bacteroides sp. D2] gi|315922079|ref|ZP_07918319.1| hydrolase [Bacteroides sp. D2] gi|313695954|gb|EFS32789.1| hydrolase [Bacteroides sp. D2] Length = 252 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETDDARILIDCG---------------PDFRTQVLHLPFEKIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + ++ VG + Sbjct: 85 DLRPFCRFGSVPIYAENYVAQGLRLRMPYCFVDHRYPGVPDIPLQEIAVGQAFSVNHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L GI L+ Sbjct: 145 LPLRVMH----GRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLVV 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R T + + +++ + S + + + ++ + + Sbjct: 190 ---NALRIATHPTHQNLEEALAVARCIQAKKTYFIHMSHDMG-LHAKVEKSLPENIHLAF 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGLDIY 251 >gi|205374023|ref|ZP_03226823.1| YqgX [Bacillus coahuilensis m4-4] Length = 210 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 27/167 (16%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK ++ PLG + N + ++ ++ D G + +D Sbjct: 1 MKWMKI---PLGPLQ---TNCYIV---YNDQKECVIFDPG-EEAAKLMAKIDG------- 43 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP--FAI--GLLEA---KRVYER 113 +R +AI +THAH DH GA+ + + VPVY ++ + Sbjct: 44 ---QRLKPLAILLTHAHFDHIGAVDKIRNQYKVPVYIHKQEETWLSDGMKNGSQNFLQYS 100 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 ++ ++ F I + P +++ + + Sbjct: 101 ITAAAAEHVISEETQLTFNDFVIHVMETPGHSPGSVSFYLEKEEIVV 147 >gi|313897451|ref|ZP_07830994.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] gi|312957821|gb|EFR39446.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] Length = 203 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 21/87 (24%) Query: 26 YGSPSSRKWIMIDCG-----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 Y +++D G + D GV + AI +TH H DH Sbjct: 17 YLLWEENHVLIVDPGSKSHKLQETIDSQNGV----------------VDAIVLTHGHFDH 60 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEA 107 + L H PVY + + +L+ Sbjct: 61 IAGVDALVKKYHCPVYINELDMAMLQD 87 >gi|303247167|ref|ZP_07333441.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] gi|302491326|gb|EFL51214.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] Length = 203 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 49/140 (35%), Gaps = 17/140 (12%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 + +++DCG PG LV I + + L+A+ +TH H DH + L Sbjct: 13 KEDGRAVVVDCG------GRPG--LVL---EEIGRRKLTLVAVLLTHLHHDHVLGVARLV 61 Query: 89 SFLHVPVYASPFAIGLLEAKRVYER---VSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 PVYAS L + VS G + +G + V Sbjct: 62 RETGAPVYASSADSFLARDGILSPGGRLVSPSFSFEDIAPGRHLFLGE-PCLVLPVPGHT 120 Query: 146 PETMALVIRSPVGNIVHTGD 165 P MA P + TGD Sbjct: 121 PGHMAYFF--PHSLVAFTGD 138 >gi|121604101|ref|YP_981430.1| beta-lactamase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593070|gb|ABM36509.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 257 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 14/115 (12%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I+IDCG+ G+ + + + +++ A+FITH H DH G L + Sbjct: 27 RILIDCGL--------GIRQLVLRLAEVDLRPEDIHAVFITHEHGDHIGCALTLALRHRI 78 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 PV+ S + A + + + +D+G + V H E Sbjct: 79 PVWMSQGTHSAIGA------PDFEGLLHTARDEKAIDLGGLQLMPFTVPHDAREP 127 >gi|260592422|ref|ZP_05857880.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] gi|260535658|gb|EEX18275.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] Length = 242 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 46/141 (32%), Gaps = 8/141 (5%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 MIDCGV GV + + + + I ITH H DH ++ + L +PV Sbjct: 1 MIDCGV--------GVRSLKKSFHNYGLQMQMVHNILITHDHADHVKSVGSISGDLRLPV 52 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 Y + + R ++V +G F + V H + + IR Sbjct: 53 YTTSEVHAGISRNWCVRRKIDHELARELVKNEEVQIGEFYVTPFTVPHDSSDCVGYSIRH 112 Query: 156 PVGNIVHTGDWKLDDDAILGD 176 D D I Sbjct: 113 DDICFTLVTDCGHITDEIAHY 133 >gi|223936291|ref|ZP_03628204.1| beta-lactamase domain protein [bacterium Ellin514] gi|223895153|gb|EEF61601.1| beta-lactamase domain protein [bacterium Ellin514] Length = 459 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 63/449 (14%), Positives = 132/449 (29%), Gaps = 104/449 (23%) Query: 17 IGMNMALYGYGSPSSRKWIMIDCGVSFPKD---DLPGVDLVFPDITFIMKERKNLMAIFI 73 IG + +++D GV ++ LP +LV +++ + AI I Sbjct: 12 IGASAWFLE----LEGHRLLMDAGVHPKREGRASLPLYNLV---------DKEEVDAIAI 58 Query: 74 THAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRV-----------YERVSKKIPCI 121 TH H DH G+L + V + + L+E + + Sbjct: 59 THCHHDHVGSLPVALRYFPKAHVLMTELSYFLVERVLHNSVNVMTRQRDEMGIKEYPLYT 118 Query: 122 SFQAGDKVD-VGAFSI---------------------ESVRVNHSIPETMALVIRSPVGN 159 Q D F E H++ + +++R Sbjct: 119 HDQVDDIAPVFQGFKYNREVDWAAFHKTRAGLPSPTLEFYDAGHAL-GSAGVMVRGGKQT 177 Query: 160 IVHTGDWKL-DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 + +TGD D + G + +L + N + +++ Sbjct: 178 VFYTGDVCFQDQTILKG-----ARFEDV-KADVLVMETTRGNREVQKDFTRAAELERLCQ 231 Query: 219 DIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 I + K + + ++ R + I+ + + L+ S R+ I +G + + Sbjct: 232 AIERVQKRKGCILIPTFALGRTQEILAM-------LALMTRS-GRIRQQPIYIGGLGRVF 283 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGN 338 + D R+ + Q L L +G+ +N+KL+ + ++ + N Sbjct: 284 TEIYDLEAHRTHRQ-----LSNLQLREALNLVVLEKGQAQNMKLSGGRIFVMTAGMMSEN 338 Query: 339 EVAI---GHIKNRLVEQGVRVIAEDAE------------------------------CPV 365 A + + V D + Sbjct: 339 TAAHDLAARMIGDERQAIFFVGYADGDTPGGRLKAAKPGETFVFSGSAGEVTRKCELEDF 398 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGE 394 ++ H DL + P ++ HG+ Sbjct: 399 DLTAHANREDLLDFVSRVSPHTVLLGHGD 427 >gi|296422077|ref|XP_002840589.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636808|emb|CAZ84780.1| unnamed protein product [Tuber melanosporum] Length = 950 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 100/344 (29%), Gaps = 39/344 (11%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHY L W P++ S L+ K + K + F+ V Sbjct: 588 AYFLSHFHSDHYVGLTSKWDH--GPIWCSRATANLVRMKLRVD--PKYVQEFPFEEWTDV 643 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPV------GNIVHTGDWKLDDDAILGDVTDKDSL 183 G + + NH P +M + I+H GD++ + L Sbjct: 644 VDG-IRVRGLDANH-CPGSMLFLFEQDCVGRLGKQRILHCGDFRASAKHLNHP------L 695 Query: 184 CAIGNEGI-----LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL------VTT 232 G +G+ ++ D+T + S+K + K ++ + Sbjct: 696 LRPGKDGVKGQKLDSVYLDTTYLNPKYAFPSQKSVIKACEELCVGLNKESIDGQGGTFAK 755 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSS-LKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 ++ ++R+ + G + S L+++ + I+ + Sbjct: 756 TATLMNRMGKFGSSSLLWGPIVSEKRKSELQKLFAPKSSHHKIRSKFASVHMTPLMKINP 815 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 E L + +++ + S N + K Sbjct: 816 ETL----RDYLNKFNPHFSRIVGLRPSGWSYRPPSNRLTDS-PSVNNVLHSASWKGEYRL 870 Query: 352 QGVRVIA----EDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + E V S H +L + + ++ Sbjct: 871 SELLPQHGSTRESKCYSVPYSEHSSFRELTMFCCALNIRKIIPT 914 >gi|30577696|emb|CAD18987.1| putative beta-lactamase [Streptomyces cattleya] Length = 329 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%) Query: 71 IFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 I +TH H DH G L + PV A+ LL A + I + G+ + Sbjct: 118 ILLTHGHYDHIGDLPYVMRKFPSAPVVATETHAHLLTAM-----GAPTDRVIWARGGEYL 172 Query: 130 DVGAFSIESVRVNHSI-PETMALV 152 D G F++ + HS+ P+ Sbjct: 173 DFGDFAVRVLPSLHSMGPDHRYFA 196 >gi|195109660|ref|XP_001999401.1| GI24489 [Drosophila mojavensis] gi|193915995|gb|EDW14862.1| GI24489 [Drosophila mojavensis] Length = 662 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 108/368 (29%), Gaps = 69/368 (18%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 ++D G F P+ T F++H H DHY L Sbjct: 245 VEDTTFVVD-GFQFGD---------IPNATHY----------FLSHYHADHYVG---LTR 281 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P+Y SP L+ + G+ + + + ++ NH P + Sbjct: 282 KFAHPLYMSPITAKLVRTFI----PIDNQYMHEIEVGESITLNEIEVTAIDANH-CPGAI 336 Query: 150 ALVI-RSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 L+ + I+HTGD++ + + I L D+T + Sbjct: 337 MLMFKFTTGKCILHTGDFRASFEMESLPIF-------WNEPQIDVLYLDTTYLSKNYDFC 389 Query: 209 SEKGIKKNIYDIMKN-----AKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + I ++ A +L S + + + + + E+ ++ Sbjct: 390 HQSDSIDRIRTAVRQFHEKNADKRILHVCGSYLIGKEKVWLALVEEFSLRVWTEP----- 444 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + + +L LS L +I + S + + Sbjct: 445 --HRRKAIDCLDWPELQLSLCDNPLEANLHVINMGKISYPSLDQYFKAFEGHYDMLLGIR 502 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 +S+ G +++ ++ S H +L+R +++ Sbjct: 503 P-SGWEKNSKPSYGKRISVIGVE--------------------YSEHSSYKELERFVRFL 541 Query: 384 RPQVLVAI 391 +P +++ Sbjct: 542 KPNKVIST 549 >gi|187761556|dbj|BAG31977.1| hypothetical protein [Mycobacterium intracellulare] Length = 219 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 28/146 (19%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM----AIFITH 75 N L G+P + +++D G+ D + K+ +L A+ TH Sbjct: 19 NTYLLASGAP--GRCVIVDPGL---------------DSASLEKKLNDLDWAPEAVLCTH 61 Query: 76 AHEDHYGALHDLWSFLHVPVY-------ASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 H DH G L S H+PVY A+ + ++ A ++ +R+ + + Sbjct: 62 GHFDHVGGAAQLQSQHHIPVYLCAADIKAAKMSNFMMAAFKIEKRIELPDFQVIEGEDSR 121 Query: 129 VDVGAFSIESVRVNHSIPETMALVIR 154 ++ G S V P + + + Sbjct: 122 LECGGRSFLFHSVPGHTPGSAVIEVD 147 >gi|300312571|ref|YP_003776663.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300075356|gb|ADJ64755.1| metal-dependent hydrolases of the beta-lactamase superfamily I protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 28/168 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGS----PSSRKWIMIDCGVSFPKDDL----PGVDLVFPD 57 + F LG E N L + PSS +M+DCG + + + G+D Sbjct: 1 MKFASLGSGSE--GNALLISAAAGDQRPSSGTTVMLDCGFTLREAERRMLRLGLD----- 53 Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++ AI +TH H DH + +PV+ S + + Sbjct: 54 -------PSDVSAIVVTHEHSDHVSGVFKFARRYRIPVWLSYGTWQAV------ADQATD 100 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + G K+ +G + V H E + V + D Sbjct: 101 VDVQFCADGQKLAIGDLELSPYTVPHDAREPIQYVAGDGDRRLGVLTD 148 >gi|161524356|ref|YP_001579368.1| beta-lactamase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189350890|ref|YP_001946518.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|160341785|gb|ABX14871.1| beta-lactamase domain protein [Burkholderia multivorans ATCC 17616] gi|189334912|dbj|BAG43982.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] Length = 258 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 18/164 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK-DDLPGVDLVFPDITFIMKE 64 + F LG E N + S ++ +++DCG S + + G + Sbjct: 1 MRFASLGSGSE--GNALVVEATSGTTTTRVLLDCGFSAKEVERRLG---------RLNLC 49 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ 124 +L AI +TH H DH G+ L +P+Y S + + Sbjct: 50 VDDLDAILVTHEHSDHVGSALTLARRASLPLYMSWGTAR------AAGADAADVDLRVLW 103 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + +G ++ V H E + V + D + Sbjct: 104 GDETAAIGDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGM 147 >gi|228906825|ref|ZP_04070694.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 200] gi|228852829|gb|EEM97614.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 200] Length = 244 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + VG Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQVGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 165 >gi|228921762|ref|ZP_04085079.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837974|gb|EEM83298.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 285 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 14/83 (16%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER----KNLMAIFITHAHEDHYG 82 G+P + ++++D G+ ++ I I + R AI +TH H DH G Sbjct: 45 GNPHTDDFVLVDAGMPKCANE----------IISIAENRFGTNSRPKAIILTHGHFDHVG 94 Query: 83 ALHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 95 GIIELIKYWDVPVYAHQMEIPFL 117 >gi|76802077|ref|YP_327085.1| hydrolase ( hydroxyacylglutathione hydrolase ) 10 [Natronomonas pharaonis DSM 2160] gi|76557942|emb|CAI49526.1| hydrolase (probable hydroxyacylglutathione hydrolase) 10 [Natronomonas pharaonis DSM 2160] Length = 232 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 27/183 (14%) Query: 17 IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 +G N L + ++D GV FP+ L G ++ + ++ + +TH Sbjct: 20 VGANAYLV-----DDGEVTLVDAGVPFPRRSLSG------ELRSLGYSLDDIDRVLVTHY 68 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAK----RVYERVSKKIPCISFQAGDKVDVG 132 DH G L + + VPVY L+ + + + + D+ Sbjct: 69 DIDHVGGLARI--DIDVPVYIGALDRRLVRRAWSPPWRHHKGVFHRVVRRWYSLSDYDLR 126 Query: 133 AFS-------IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV---TDKDS 182 + P + ++ W D + D Sbjct: 127 PVEDDDTIGAFRTFHTPGHNPGHTVYIHDETETAMLGDLVWATDGGFVPPPWLDSYDTAR 186 Query: 183 LCA 185 L Sbjct: 187 LAE 189 >gi|308069216|ref|YP_003870821.1| YflN protein [Paenibacillus polymyxa E681] gi|305858495|gb|ADM70283.1| YflN protein [Paenibacillus polymyxa E681] Length = 267 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 18/155 (11%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE-RKNLMAIFITHAHE 78 NM G P SR W+++D G++ D + I + +AI +TH H Sbjct: 29 NMCFI--GKPGSRSWVLVDTGMAGFTDSI---------IRLAEERFAGPPIAIVLTHGHF 77 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-----IPCISFQAGDKVDVGA 133 DH G++ +L PVYA P + L + Y++ + ISF + Sbjct: 78 DHVGSVIELVQHWGTPVYAHPLELPYLTGMKDYQKPDPSVGGGLMSGISFLYPNDAIDLD 137 Query: 134 FSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 I S+ + S+P + +P H + Sbjct: 138 DRITSLPPDGSVPGAPGWKWLHTPGHTPGHVSLFH 172 >gi|254976337|ref|ZP_05272809.1| putative hydrolase [Clostridium difficile QCD-66c26] gi|255093722|ref|ZP_05323200.1| putative hydrolase [Clostridium difficile CIP 107932] gi|255315474|ref|ZP_05357057.1| putative hydrolase [Clostridium difficile QCD-76w55] gi|255518137|ref|ZP_05385813.1| putative hydrolase [Clostridium difficile QCD-97b34] gi|255651253|ref|ZP_05398155.1| putative hydrolase [Clostridium difficile QCD-37x79] gi|260684317|ref|YP_003215602.1| putative hydrolase [Clostridium difficile CD196] gi|260687976|ref|YP_003219110.1| putative hydrolase [Clostridium difficile R20291] gi|306521096|ref|ZP_07407443.1| putative hydrolase [Clostridium difficile QCD-32g58] gi|260210480|emb|CBA64955.1| putative hydrolase [Clostridium difficile CD196] gi|260213993|emb|CBE06107.1| putative hydrolase [Clostridium difficile R20291] Length = 204 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 25/180 (13%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G+N + G ++K +ID G S + ++F+ + N+ I +TH H Sbjct: 12 GVNTYVL--GDEKTKKCAVIDPGGSLVET-----------LSFVKENELNIEYIILTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDV 131 DH G + D+ V A LL K + I DK+++ Sbjct: 59 GDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVSDKDKLEL 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G + + M + + + TGD D + + + Sbjct: 119 GELKMTFLHTPGHTQGCMCIRVEDE----MFTGDTLFAGSIGRTDLYSGDFNQMEKSLKK 174 >gi|108803964|ref|YP_643901.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108765207|gb|ABG04089.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 214 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 19/144 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G +S ++D P D+ + L + + I +THAH D Sbjct: 14 NCYIL--GDEASGSGALVD-----PGDEAVRIALAV------EQTGLEIEKILLTHAHID 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCISFQAGDKVDVGA 133 H GA+ L PV A + LLE + ++V+VG Sbjct: 61 HVGAVASLVEEYGCPVLAHRESEPLLEQLPTQALMMGLRFGKVPRLDGYIEDRERVEVGG 120 Query: 134 FSIESVRVNHSIPETMALVIRSPV 157 ++E++ P +A + S Sbjct: 121 LTLEALYTPGHAPGHLAFYLESEG 144 >gi|78484479|ref|YP_390404.1| cyclic-AMP phosphodiesterase [Thiomicrospira crunogena XCL-2] gi|78362765|gb|ABB40730.1| cyclic-AMP phosphodiesterase [Thiomicrospira crunogena XCL-2] Length = 259 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 32/157 (20%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 + +++D G GV+ + T+ +E + + AI +TH+H DH L L + L Sbjct: 24 DQTVLLDAGT--------GVESL----TY--EEMQQVEAIVLTHSHLDHISHLPFLLNNL 69 Query: 92 ------HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFS---------- 135 + VY I L+ + + + V + Sbjct: 70 IGGSHQTIQVYGLSHTIDALKKHIFNDIIWPDFTTLPSHDCPCVQLNIVKYGDVLSLAGK 129 Query: 136 -IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 + + +HS+P I + +GD +DD Sbjct: 130 QVVVLPAHHSVPTA-GYWIGNDDAAFAFSGDCSENDD 165 >gi|52144224|ref|YP_082604.1| metal-dependant hydrolase [Bacillus cereus E33L] gi|51977693|gb|AAU19243.1| conserved hypothetical protein; metal-dependant hydrolase [Bacillus cereus E33L] Length = 244 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 34/177 (19%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+G + GY +++DCG + P ++ A+ Sbjct: 10 GGFPEVGEATS--GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAV 55 Query: 72 FITHAHEDHYGALHDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 ++H H DH + L L P+Y F E Sbjct: 56 VLSHYHHDHVADIGVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHT 109 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 I + + + +G FSI ++ H + A+ I + +V++ D + I Sbjct: 110 KGIPYNPEETLQIGPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|315641035|ref|ZP_07896118.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315483204|gb|EFU73717.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 206 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 26/136 (19%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-IMKERKNLMAIFITHAHE 78 N L + + +++D PG D I+ I K +AI +TH H Sbjct: 14 NCYLL----WQNNELLVVD----------PGADA--KKISAAIKKTAATPLAIILTHTHY 57 Query: 79 DHYGALHDLWSFLHVPVYAS--------PFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 DH GA+ + +PVY S L ++ + F+ D + Sbjct: 58 DHIGAVDAIRDEYQIPVYVSSDEQEWLQSPPKNLSGRHPELGPITARNAEHEFELNDTLT 117 Query: 131 VGAFSIESVRV-NHSI 145 +G+FS E V HSI Sbjct: 118 IGSFSFEVVPTPGHSI 133 >gi|291166505|gb|EFE28551.1| metallo-beta-lactamase family protein [Filifactor alocis ATCC 35896] Length = 208 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 23/152 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + P ++K +ID G++ G L+ F+ N+ IF+TH H D Sbjct: 14 NSYVL--YDPETKKAYVIDPGLN-------GSALI----QFLKGNNLNVEMIFLTHGHGD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ------AGDKVDVGA 133 H + + +YA L E+ F+ GD + +G Sbjct: 61 HISDVPMILEHYDAKIYAHRADSVLFESAEKNHSPLISGKFTEFKIDFFVDEGDSITLGK 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ + + + ++ TGD Sbjct: 121 KHMDVIHTPGHTKGGVCFHFEN----MLFTGD 148 >gi|254283853|ref|ZP_04958821.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] gi|219680056|gb|EED36405.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] Length = 264 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 21/144 (14%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDL---VFPDITFIMKERKNLMAIFITHAHEDHY 81 G S ++IDCG FP+ + + P N+ AI +TH H DH Sbjct: 14 GTLVASDSTTLLIDCG--FPRREAERRIARRGIAP---------SNIDAILVTHEHADHA 62 Query: 82 GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 + + +PVY + R++ F + D VG ++ SV V Sbjct: 63 AGVAAISRAHGIPVYLTHGTAA-------TGRITGAHRLHRFNSDDSFVVGDIAVTSVTV 115 Query: 142 NHSIPETMALVIRSPVGNIVHTGD 165 H E + + S + D Sbjct: 116 PHDAREPVQYRLASGDCGVGVLTD 139 >gi|167771533|ref|ZP_02443586.1| hypothetical protein ANACOL_02903 [Anaerotruncus colihominis DSM 17241] gi|167666173|gb|EDS10303.1| hypothetical protein ANACOL_02903 [Anaerotruncus colihominis DSM 17241] Length = 214 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 29/182 (15%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG +G N + G + +ID G F + L I+F+ ++ I + Sbjct: 8 VGTMGTNCYIAADGDVCA----VIDPG--FQAEKL---------ISFLRGQKLRPEYILL 52 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV----YERVSKKIPCISFQAG--- 126 TH H DH GA+ L + +L ++ ++ + ++ Sbjct: 53 THGHYDHIGAVRALRDTFGCKLAIGRGDEEMLADRKKSLAIMRGMTDEDYILTPDERLDE 112 Query: 127 -DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSL 183 D+V VG + E + P A + G+++ TGD + D I D + + Sbjct: 113 GDRVTVGGMTFEVIDT----PGHTAGGVTYRCGDVLFTGDTLFAGDIGRIDLYGGDYEEM 168 Query: 184 CA 185 A Sbjct: 169 MA 170 >gi|75759370|ref|ZP_00739466.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904014|ref|ZP_04068120.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 4222] gi|74493137|gb|EAO56257.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228855610|gb|EEN00164.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 4222] Length = 244 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + VG Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQVGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + G +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDGAVVYSADSSYIPEFIPF 165 >gi|313886306|ref|ZP_07820032.1| metallo-beta-lactamase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332299794|ref|YP_004441715.1| metallo-beta-lactamase superfamily protein [Porphyromonas asaccharolytica DSM 20707] gi|312924251|gb|EFR35034.1| metallo-beta-lactamase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332176857|gb|AEE12547.1| putative metallo-beta-lactamase superfamily protein [Porphyromonas asaccharolytica DSM 20707] Length = 269 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 18/156 (11%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + F+ L G G N + ++ID G++ G++ + Sbjct: 2 IRFMSLASGSTG----NCYYLEHDGQG----LLIDAGIALYDIKT-GLE------QAALS 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ AI +TH H DH + L + +PVYA+ L+ R ER+ Sbjct: 47 LEHDVQAILLTHNHADHARTVGKLANRYGLPVYATHPVQCGLDYMRGMERIKHDRRYAIE 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +G + V H + + I S G Sbjct: 107 PEVPFELIG-LVVTPFSVPHDSADNVGYHISSEDGF 141 >gi|225181182|ref|ZP_03734628.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168151|gb|EEG76956.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 264 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 35/226 (15%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + + ++ID G+S G L +T I + +L A+ ++H H DH Sbjct: 16 IYVATEQTKLLIDAGLS-------GKKLAAA-LTEIDVDPFSLDALLLSHDHNDHTCGAG 67 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + +P+YA+ K + C + + ++ ++ES + H Sbjct: 68 IMARRYRMPLYATGPTWQAAACKM---GPVPEEMCRTLPSFGEMQFADLTVESFPIPHDA 124 Query: 146 PETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS-----TN 200 + V R +I D + D + N L L + N Sbjct: 125 AGPVGFVFRQAEKSIALVTDLG---------MITPDIFQMLQNVNCLVLEANHDEEMLKN 175 Query: 201 AMREGT----------CISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 +S + DI+ V++ S Sbjct: 176 GTYPWPLKKRILSSRGHLSNHHAADFLTDIISPVTTHVVLAHLSEH 221 >gi|114566729|ref|YP_753883.1| RNA-metabolising metallo-beta-lactamase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337664|gb|ABI68512.1| RNA-metabolising metallo-beta-lactamase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 530 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 89/286 (31%), Gaps = 64/286 (22%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ F LG + + L + + +DCG+ F + ++ Sbjct: 1 MKIRF--LGAAKTVTGSFFLVE----TEKIRFAVDCGL-FQGPKS------IQERNYLDF 47 Query: 64 ERK--NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL--------------- 105 ++ + +THAH DH G + L +Y S L Sbjct: 48 SIDPVSIDFLLLTHAHIDHIGLIPKLCKKGFRGTIYCSHATEELASILLPDSGYIQESEI 107 Query: 106 -----EAKRVYERVSKKIPCISF-----------QAGDKVDVGA-FSIESVRVNHSIPET 148 + KR + + + I + + + + + H I + Sbjct: 108 ERKNRKLKRSDQALLEPIYTVEDSLQCLPQFRSLNMDEIIGLAPGIEVRLRDAGH-ILGS 166 Query: 149 MALVIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + I +V +GD +D I+ D E L+ +ST R Sbjct: 167 CIVEIWVEEAGEKTKLVFSGDLGNNDQPIVKDPAVI--------ESADYLIVESTYGDRL 218 Query: 205 GTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 I E+ + K + D G +++ F+ V R + ++ + Sbjct: 219 HPQIGERNQQLKEVIDETMGKGGNLIIPAFA--VERTQDLLYDLLK 262 >gi|326335502|ref|ZP_08201689.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692268|gb|EGD34220.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 296 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 77/239 (32%), Gaps = 42/239 (17%) Query: 17 IGMNMALYGYGSPSSRKW---IMIDCGVSFPKDDLPGVDLVF---PDITF--IMKERKNL 68 IGMN + ++ +++ G GV++ PD + + ++L Sbjct: 57 IGMNTPVARSKDKKDKRLRTSVLLSWG---------GVNVNIDCSPDFRQQMLRHKVQHL 107 Query: 69 MAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFAIGLLEAKR-----VYERVSKKIP 119 AI TH H DH L + +P+Y P I L + R + Sbjct: 108 EAILFTHEHADHTAGLDDIRPFVLKQGDMPIYGLPRVIEQLRIRFAYIFAKENRYAGAPS 167 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D F + + SI +I +GN+ + D + Sbjct: 168 VKVTEIEDYTPFLLFGKKVTPI--SIQHGTLPIIGYRIGNLAYITD---------AKYIN 216 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + L L L NA+R+ + + + + I + +T S ++ Sbjct: 217 EKELSKFYKVDTLVL-----NALRKAPHPTHLNLDEALTIIREVCPRQAFLTHMSQTMG 270 >gi|300309651|ref|YP_003773743.1| cAMP phosphodiesterase-like protein [Herbaspirillum seropedicae SmR1] gi|300072436|gb|ADJ61835.1| cAMP phosphodiesterases protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 17/101 (16%) Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLH----VPV--YASPFAIGLLEAKRVYERVSK 116 + + + +FITHAH DH L + + P+ +A+ + ++ + Sbjct: 42 ERLQAIDHVFITHAHLDHIACLPLMIDSVGDMRPTPITMHATAATLEIIRKHIFNWHIWP 101 Query: 117 KIPCI-----------SFQAGDKVDVGAFSIESVRVNHSIP 146 I + + G V +G SI ++ H++P Sbjct: 102 DFSVIPSAEQPFLRFATIEPGQTVALGQRSITALPAAHTVP 142 >gi|229195399|ref|ZP_04322168.1| Beta-lactamase domain protein [Bacillus cereus m1293] gi|228588098|gb|EEK46147.1| Beta-lactamase domain protein [Bacillus cereus m1293] Length = 244 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E+ I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ESGFQSLTHKPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|114800462|ref|YP_760377.1| hypothetical protein HNE_1669 [Hyphomonas neptunium ATCC 15444] gi|114740636|gb|ABI78761.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 333 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 112/363 (30%), Gaps = 68/363 (18%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 +TH H DH H V A+P + ++EA+ G+ V+V Sbjct: 34 IVTHGHADH-------ARAGHGRVIATPETLAIMEARYGPTEGWP------VAYGETVEV 80 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDVTDKDSLCAIGNE 189 G + H + + +++ ++ TGD+K D Sbjct: 81 GDVRVTLYPAGH-VLGSAQVLLERAGERVIVTGDFKRAADPTCPPFVPI----------- 128 Query: 190 GILALMCDSTNAMREGTCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ ++T + I K + + ++ + CVLV ++ + + + +I Sbjct: 129 ACDVLITEATFGLPVFRHPPASDEIAKVMERLAESPERCVLVGAYA--LGKAQRVICHLR 186 Query: 249 QIG--RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + G + I L G +++++ ++ G+ + + + R Sbjct: 187 EAGYDKPIYLHG-AMEKLCALYEAHGVALGELRSATGAEAAEMAGH----VVVAPPSALR 241 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 R + + +S ++ RV + + P+ Sbjct: 242 ----------DRWARRLPDPVLAMAS---------------GWLQVRQRVRQNNIDLPLV 276 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFP 426 +S H +L R + + P + HG + L + + + R Sbjct: 277 ISDHADWEELTRTIREVAPSEVWVTHG------SEAGLLRWCELNQIRARALHMVGRTDE 330 Query: 427 DPI 429 Sbjct: 331 GEA 333 >gi|322434543|ref|YP_004216755.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] gi|321162270|gb|ADW67975.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] Length = 346 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + S R +++D G+S + + + + ++ + L AI ITH H Sbjct: 12 GNSTVI----ASERTRVLVDAGLSCRE--------LLRRMAVVGEDPEKLDAILITHEHL 59 Query: 79 DHYGALHDLWSFLHVPVYASPFA 101 DH L L L +PV+ + Sbjct: 60 DHVAGLAVLARRLKIPVFFTEQT 82 >gi|307637503|gb|ADN79953.1| hypothetical protein hp908_0827 [Helicobacter pylori 908] gi|325996092|gb|ADZ51497.1| hypothetical protein hp2018_0795 [Helicobacter pylori 2018] gi|325997688|gb|ADZ49896.1| hypothetical protein hp2017_0794 [Helicobacter pylori 2017] Length = 204 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 24/166 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y S +ID G F + ++++ KN AI ITH H DH Sbjct: 16 YIVKLSSGDFIIDPG--FSSSE------------WVLENAKNPKAILITHGHYDHVWDSA 61 Query: 86 DLWSFL-HVPVYASPFAIGLLEAKRVYERVS---KKIPCISFQAGDKVDVGAFSIESVRV 141 L L P+YA + +LE + + + +++ + +I+ Sbjct: 62 QLSKALKDTPIYAPKDDVFMLENDIFHLGMPVFSPSFSVPCNKGCTTLEIASTTIKYWHF 121 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 P + I ++ +GD+ +++ + Sbjct: 122 PGHTPGCSIIEIEG----VIFSGDFIFYRSIGRYDFPYSNEKDMKE 163 >gi|169829077|ref|YP_001699235.1| hypothetical protein Bsph_3619 [Lysinibacillus sphaericus C3-41] gi|168993565|gb|ACA41105.1| Hypothetical yqgX protein [Lysinibacillus sphaericus C3-41] Length = 214 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 36/158 (22%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ I+ D G + + + I +AIF+THAH D Sbjct: 15 NCYIVS---NKDKECIVFDPG---EEAERL--------LKTIRSNGLKPLAIFLTHAHFD 60 Query: 80 HYGALHDLWSFLHVPVY----------------ASPFAIGLLEAKRVYERVSKKIPCISF 123 H GA+ + ++PV+ +S +A RV+ Sbjct: 61 HIGAVDAVREAFNIPVWIHEKEVSWLGDPEKNGSSKYAA------LPDYRVAAPAQDTII 114 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + + ++ F ++V P +++ V IV Sbjct: 115 KKEQQFEISNFVFQAVFTPGHSPGSISYVFEKDGFAIV 152 >gi|125605833|gb|EAZ44869.1| hypothetical protein OsJ_29509 [Oryza sativa Japonica Group] Length = 967 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 106/325 (32%), Gaps = 43/325 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K +K+ + Sbjct: 660 FLTHFHVDHYQGLT--KSFCHGKIYCSSVTANLVHYKI----GIPWDRLHVLPLNEKITI 713 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++ NH P + ++ S ++HTGD++ + V + + Sbjct: 714 AGVNLTCFDANH-CPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRV--------LQSSP 764 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I L+ D+T R E I+ I I A K L+ +++ R+ + Sbjct: 765 IHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLYMEVAR 824 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 Q K++ A + I+K L + + + P Sbjct: 825 LLQ------------KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVV-----PM 867 Query: 307 SALAQLSRGEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 LA R + + + D ++ R +QG + E Sbjct: 868 WTLASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVP---- 923 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +L+ ++I P+ ++ Sbjct: 924 -YSEHSSFTELREFVRFISPEHIIP 947 >gi|125563862|gb|EAZ09242.1| hypothetical protein OsI_31515 [Oryza sativa Indica Group] Length = 966 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 106/325 (32%), Gaps = 43/325 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K +K+ + Sbjct: 659 FLTHFHVDHYQGLT--KSFCHGKIYCSSVTANLVHYKI----GIPWDRLHVLPLNEKITI 712 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++ NH P + ++ S ++HTGD++ + V + + Sbjct: 713 AGVNLTCFDANH-CPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRV--------LQSSP 763 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I L+ D+T R E I+ I I A K L+ +++ R+ + Sbjct: 764 IHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLYMEVAR 823 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 Q K++ A + I+K L + + + P Sbjct: 824 LLQ------------KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVV-----PM 866 Query: 307 SALAQLSRGEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 LA R + + + D ++ R +QG + E Sbjct: 867 WTLASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVP---- 922 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +L+ ++I P+ ++ Sbjct: 923 -YSEHSSFTELREFVRFISPEHIIP 946 >gi|115479355|ref|NP_001063271.1| Os09g0439000 [Oryza sativa Japonica Group] gi|113631504|dbj|BAF25185.1| Os09g0439000 [Oryza sativa Japonica Group] Length = 966 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 106/325 (32%), Gaps = 43/325 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K +K+ + Sbjct: 659 FLTHFHVDHYQGLT--KSFCHGKIYCSSVTANLVHYKI----GIPWDRLHVLPLNEKITI 712 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++ NH P + ++ S ++HTGD++ + V + + Sbjct: 713 AGVNLTCFDANH-CPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRV--------LQSSP 763 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I L+ D+T R E I+ I I A K L+ +++ R+ + Sbjct: 764 IHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLYMEVAR 823 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 Q K++ A + I+K L + + + P Sbjct: 824 LLQ------------KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVV-----PM 866 Query: 307 SALAQLSRGEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 LA R + + + D ++ R +QG + E Sbjct: 867 WTLASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVP---- 922 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +L+ ++I P+ ++ Sbjct: 923 -YSEHSSFTELREFVRFISPEHIIP 946 >gi|51091343|dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group] gi|51091393|dbj|BAD36136.1| putative SNM1 [Oryza sativa Japonica Group] Length = 1024 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 106/325 (32%), Gaps = 43/325 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L SF H +Y S L+ K +K+ + Sbjct: 717 FLTHFHVDHYQGLT--KSFCHGKIYCSSVTANLVHYKI----GIPWDRLHVLPLNEKITI 770 Query: 132 GAFSIESVRVNHSIPETMALVIR-SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 ++ NH P + ++ S ++HTGD++ + V + + Sbjct: 771 AGVNLTCFDANH-CPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRV--------LQSSP 821 Query: 191 ILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA---KGCVLVTTFSSSVSRIRSIIDI 246 I L+ D+T R E I+ I I A K L+ +++ R+ + Sbjct: 822 IHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLYMEVAR 881 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 Q K++ A + I+K L + + + P Sbjct: 882 LLQ------------KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVV-----PM 924 Query: 307 SALAQLSRGEMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 LA R + + + D ++ R +QG + E Sbjct: 925 WTLASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVP---- 980 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVA 390 S H +L+ ++I P+ ++ Sbjct: 981 -YSEHSSFTELREFVRFISPEHIIP 1004 >gi|332223568|ref|XP_003260944.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform 1 [Nomascus leucogenys] Length = 782 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|328768987|gb|EGF79032.1| hypothetical protein BATDEDRAFT_12823 [Batrachochytrium dendrobatidis JAM81] Length = 719 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 81/269 (30%), Gaps = 41/269 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKE 64 + F + G + G L +++DCG S + K Sbjct: 5 VKFTAILGAHDQGPLCYLLEI----DEAKLLLDCGWSESTDPSQL---------AALEKV 51 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFA--------IGLLEAKR--VYE 112 + + A+ ++HA DH GA L PV+A+ L++AK Sbjct: 52 ARQIDALLLSHADLDHLGAFPYAAKHLGLTCPVFATTPVHDMGQACMHDLIQAKLNQEEF 111 Query: 113 RVSKKIPCISFQAGDKV-----------DVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 + K + A + ++ + H+I I+ IV Sbjct: 112 HLFTKDDIDTAFAKTTILRYSQPTVLTGKCQGITVSAFSAGHTI-GGTIWKIKKDTEEIV 170 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 + D+ + L L L+ D+ N + ++ I I Sbjct: 171 YAVDYNHRKERHLNGT---VLLSTDTLIRPTLLITDAFNTLMPDPAPRKQRDAALIESIA 227 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 V S S +R+ ++ + +Q Sbjct: 228 TVLSEHGNVLIPSDSSTRVLELLYMLDQH 256 >gi|167748552|ref|ZP_02420679.1| hypothetical protein ANACAC_03324 [Anaerostipes caccae DSM 14662] gi|167652025|gb|EDR96154.1| hypothetical protein ANACAC_03324 [Anaerostipes caccae DSM 14662] Length = 535 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 65/501 (12%), Positives = 137/501 (27%), Gaps = 103/501 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + +G E+ + K ++D G+ K+ +L Sbjct: 1 MTMKLMFIGADHEVTGSCHYVEAC----GKRFLVDYGMEQGKNVYENAELPV-------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------YERV 114 + + +THAH DH G L L++ V A+ L + Sbjct: 49 NPSEIDFVLLTHAHIDHSGLLPLLYANGFRGSVIATKATKDLCDIMLRDSAHIQEFEAEW 108 Query: 115 SKKIPCISFQAGDK------------------------VDVGAFSIESVRVNHSIPETMA 150 + S + + S+ + H + + + Sbjct: 109 KNRKARRSGKPEEPPLYTMDDAVSVMEQFKGCQYNEKLEVSRGISVRFTDIGH-LLGSAS 167 Query: 151 LVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + IV +GD ++ ++ D E ++ +ST R Sbjct: 168 IEVWLTEADTQKKIVFSGDIGNNNQPLIKDP--------HYTESADYVVMESTYGDRFHE 219 Query: 207 CISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA--EQIGRKIVLLGSSLK 262 + + I G V++ +F+ V R + ++ + R++ G Sbjct: 220 SHPDYVGELAGLIQKTFDRG-GNVVIPSFA--VGRTQELLYYIRQIKEERRVKNHG-DFA 275 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVK 321 V + V Q + D + + + +I G S L ++ + + + Sbjct: 276 VYVDSPLAVEATNVFQENIHDT----FDEDAMALINQGINPITFSNLKLSITSNDSKAIN 331 Query: 322 LAEKDTVIFSSRAI-PGNEVAIGHIKNRLVEQGVRVIAEDAECPV--------------- 365 E+ VI S+ + + N + V Sbjct: 332 FDEERKVIISASGMCEAGRIRHHLKHNLWKPENTIVFVGYQAYGTLGRALVEGAKEVRLF 391 Query: 366 --------------HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEG 409 +SGH L + + P+ +HGE + + E Sbjct: 392 GETIKVEADVVRLEGMSGHADKKGLSVWAEAFKDQPEKFFIVHGEDETCDSFAQYLESEC 451 Query: 410 IACVPPVRNGKMLRLFPDPIE 430 +G + L E Sbjct: 452 GRKAEAPYSGDIFDLAAGEWE 472 >gi|91203673|emb|CAJ71326.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 468 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 81/481 (16%), Positives = 150/481 (31%), Gaps = 112/481 (23%) Query: 26 YGSPSSRKWIMIDCGV-----SFPKDDL--PGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + +SR +++DCG+ + +D K L AI ++HAH Sbjct: 18 HLIRTSRASVLLDCGLFQGHRKEADEKNRNFSID------------GKQLDAIVLSHAHI 65 Query: 79 DHYGALHDLWSF-LHVPVYASPFAIGLLEAKR----------VYE------RVSKKIPCI 121 DH GAL ++ P+YA+P L R +K + + Sbjct: 66 DHSGALPCIFKNGYRGPIYATPATRDLCSPMLMDTAWIMKGDAEHIQKLISRGAKHLDPV 125 Query: 122 SFQAGDKVDVG------------------AFSIESVRVNHSIPETMALVIRSPVG----N 159 G++ G S+ H + + VI Sbjct: 126 EPLYGERDVAGTLSQFIGIPYHRKQTIAPGISLSFFDAGH-VLGSAISVIDVEDDGQKVR 184 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 + TGD IL D + +GI L+ +ST R E I+ Sbjct: 185 LAFTGDLGRKHLPILR---DPEI-----PDGISCLLTESTYGDRLH-APIELTIEALAEV 235 Query: 220 IMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG-IIKKDQ 278 I + K + S ++ R + II +++ KR+ S+ + + + Sbjct: 236 INRTGKKGGKIVIPSFALERAQEIIYALKKLH--------DQKRIPSIPVYIDSPLTVKL 287 Query: 279 LFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSR-GEMRNVKLAEKDTVIFSSR---- 333 + Y E ++ + + L +S + + + + + +++ S+ Sbjct: 288 TDVFKLHPECYDTEAFALLHSENSPFEFPGLKYISSVEDSKKISSSTEPSIVISASGMCE 347 Query: 334 -------------------AIPGNEVAI---GHIKNRLVEQGVRVIAEDAECPVHV---- 367 I G + + + E + + E V V Sbjct: 348 GGRILHHLAATIGDARNTVIIVGYQAEHTLGRRLVEKRPEVKIYGVMRRLEAEVVVLNGF 407 Query: 368 SGHPYPNDLKRMYQWIRPQ----VLVAIHGEPLHLVAHKELALQEGIACVPPVRNGKMLR 423 SGH N L R +R + ++ +HGEP K G V G +++ Sbjct: 408 SGHADQNGLLRFADALRSKGHLEKVILVHGEPKSQETLKTKLSDHGFQSVDIPGPGDVIK 467 Query: 424 L 424 L Sbjct: 468 L 468 >gi|317470615|ref|ZP_07930001.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316901906|gb|EFV23834.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 535 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 65/501 (12%), Positives = 136/501 (27%), Gaps = 103/501 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + + +G E+ + K ++D G+ K+ +L Sbjct: 1 MTMKLMFIGADHEVTGSCHYVEAC----GKRFLVDYGMEQGKNVYENAELPV-------- 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV--------YERV 114 + + +THAH DH G L L++ V A+ L + Sbjct: 49 NPSEIDFVLLTHAHIDHSGLLPLLYANGFRGSVIATKATKDLCDIMLRDSAHIQEFEAEW 108 Query: 115 SKKIPCISFQAGDK------------------------VDVGAFSIESVRVNHSIPETMA 150 + S + + S+ + H + + + Sbjct: 109 KNRKARRSGKPEEPPLYTMDDAVSVMEQFKGCQYNEKLEVSRGISVRFTDIGH-LLGSAS 167 Query: 151 LVIR----SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGT 206 + + IV +GD ++ ++ D E ++ +ST R Sbjct: 168 IEVWLTEADTQKKIVFSGDIGNNNQPLIKDP--------HYTESADYVVMESTYGDRFHE 219 Query: 207 CISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA--EQIGRKIVLLGSSLK 262 + + I G V++ +F+ V R + ++ + R++ G Sbjct: 220 SHPDYVGELAGLIQKTFDRG-GNVVIPSFA--VGRTQELLYYIRQIKEERRVKNHG-DFA 275 Query: 263 RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQ-LSRGEMRNVK 321 V + V Q + D + + + +I G S L ++ + + + Sbjct: 276 VYVDSPLAVEATNVFQENIHDT----FDEDAMALINQGINPITFSNLKLSITSNDSKAIN 331 Query: 322 LAEKDTVIFSSRAI-PGNEVAIGHIKNRLVEQGVRVIAEDAECPV--------------- 365 E+ VI S+ + + N + V Sbjct: 332 FDEERKVIISASGMCEAGRIRHHLKHNLWKPENTIVFVGYQAYGTLGRALVEGAKEVRLF 391 Query: 366 --------------HVSGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEG 409 +SGH L + + P+ +HGE + E Sbjct: 392 SETIKVEADVVRLEGMSGHADKKGLSVWAEAFKDQPEKFFIVHGEDETCDNFAQYLESEC 451 Query: 410 IACVPPVRNGKMLRLFPDPIE 430 +G + L E Sbjct: 452 GRKAEAPYSGDIFDLAAGEWE 472 >gi|225863051|ref|YP_002748429.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|229183400|ref|ZP_04310626.1| Beta-lactamase domain protein [Bacillus cereus BGSC 6E1] gi|225790860|gb|ACO31077.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|228600076|gb|EEK57670.1| Beta-lactamase domain protein [Bacillus cereus BGSC 6E1] Length = 244 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 44/188 (23%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG GV +I ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G FSI ++ H + A+ I + +V++ D + I + + Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGSDAVVYSADSSYIPEFIPF------------TKDV 169 Query: 192 LALMCDST 199 +C+ Sbjct: 170 DLFICECN 177 >gi|160882261|ref|ZP_02063264.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] gi|156112350|gb|EDO14095.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] Length = 219 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 7 VETDDARILIDCG---------------PDFRTQVLRLPFEKIDGVLITHEHYDHVGGLD 51 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + ++ VG + Sbjct: 52 DLRPFCRFGSVPIYAENYVAQGLRLRMPYCFVDHRYPGVPDIPLQEISVGQAFSVNHTEV 111 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L GI L+ Sbjct: 112 LPLRVMH----GRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLVV 156 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R T + + +++ + + S + + + ++ + + Sbjct: 157 ---NALRIATHPTHQNLEEALAVAQRIQAKKTYFIHMSHDMG-LHAEVEKSLPENIHLAF 212 Query: 257 LGSSLK 262 G + Sbjct: 213 DGLDIY 218 >gi|311033070|ref|ZP_07711160.1| metallo-beta-lactamase family protein [Bacillus sp. m3-13] Length = 278 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 16/92 (17%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN---LMAIFITHA 76 N+ +YG +S W++ID G+ ++ V + AI +TH Sbjct: 40 NICIYG----NSEDWVLIDTGMPKSAREILSV---------VENHLGKGARPKAIILTHG 86 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 H DH GA DL VPVYA + L K Sbjct: 87 HFDHVGASVDLVRHWDVPVYAHELELPYLTGK 118 >gi|55981592|ref|YP_144889.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] gi|260656160|pdb|2ZWR|A Chain A, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 gi|260656161|pdb|2ZWR|B Chain B, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 gi|283135305|pdb|2ZZI|A Chain A, Crystal Structure Of Ttha1623 In A Di-Iron-Bound Form gi|283135306|pdb|2ZZI|B Chain B, Crystal Structure Of Ttha1623 In A Di-Iron-Bound Form gi|55773005|dbj|BAD71446.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] Length = 207 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 65/186 (34%), Gaps = 30/186 (16%) Query: 6 LVFLP--LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + P LG + E N L G ++ID G D P L T ++ Sbjct: 1 MRVFPVTLGPLQE---NAYLVETGEGP----VLIDPG------DEPEKLLALFQTTGLI- 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE----AKRVYERVSKKIP 119 +AI +THAH DH GA+ L L +PVY P + L E A R + K P Sbjct: 47 ----PLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARAWGLAIPKPP 102 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDV 177 + + + F + HS + P G V +GD Sbjct: 103 LPVRPLEEGMRLFGFQV-LHLPGHS---PGHVAFYDPEGAQVFSGDLLFRGSVGRYDLPG 158 Query: 178 TDKDSL 183 D +L Sbjct: 159 ADPKAL 164 >gi|293376826|ref|ZP_06623045.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] gi|292644520|gb|EFF62611.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] Length = 208 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 8/81 (9%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I + + L AI +TH H DH GA+++L + VP+YA K + Sbjct: 37 IRHLKTKGLELEAILLTHGHFDHIGAVNELATHYQVPIYAHK--------KEKEYFENPD 88 Query: 118 IPCISFQAGDKVDVGAFSIES 138 + V F + Sbjct: 89 VNLSPMIYERLVLNPNFDYQF 109 >gi|28461235|ref|NP_787002.1| cleavage and polyadenylation specificity factor subunit 2 [Bos taurus] gi|1706103|sp|Q10568|CPSF2_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|599683|emb|CAA53535.1| Cleavage and Polyadenylation specificity factor (CPSF) 100kD subunit [Bos taurus] gi|296475169|gb|DAA17284.1| cleavage and polyadenylation specificity factor subunit 2 [Bos taurus] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|325837270|ref|ZP_08166348.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] gi|325491044|gb|EGC93339.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] Length = 208 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 8/81 (9%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I + + L AI +TH H DH GA+++L + VP+YA K + Sbjct: 37 IRHLKTKGLELEAILLTHGHFDHIGAVNELATHYQVPIYAHK--------KEKEYFENPD 88 Query: 118 IPCISFQAGDKVDVGAFSIES 138 + V F + Sbjct: 89 VNLSPMIYERLVLNPNFDYQF 109 >gi|257887578|ref|ZP_05667231.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896074|ref|ZP_05675727.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|293377490|ref|ZP_06623686.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] gi|293571928|ref|ZP_06682942.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|257823632|gb|EEV50564.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257832639|gb|EEV59060.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|291607946|gb|EFF37254.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|292643859|gb|EFF61973.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] Length = 208 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G I N L + ++ID P +D + K + +AI +T Sbjct: 9 GMIEENCYLV----YNEEALLIID-----PGEDAEQIKQEI------KKTNQQPVAILLT 53 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH GA+ L ++ +PVY SP LE K + + + + V Sbjct: 54 HTHYDHIGAVEPLRAYYQIPVYVSP-----LEQKWLGDPILNLSGLGRHDDIADIIVSPA 108 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E +++ V+ +P +I + + DD Sbjct: 109 EYEFEMKTYTLGNMSFRVVPTPGHSIG-SVSFIFDD 143 >gi|225568637|ref|ZP_03777662.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] gi|225162565|gb|EEG75184.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] Length = 211 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 + I E + A+ +TH H DH L VPVY L++ + + Sbjct: 44 MGHIKSEGLKIEAVLLTHGHFDHIMGLDGFLKEYDVPVYLHRDDEQLIKDPGLNQSGVYT 103 Query: 118 IPC-----ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + F + + P + + ++ +GD Sbjct: 104 SGYTFGSATYIEDNETLKTAGFEFKVLHTPGHTPGGVCYY--AEAEKVLFSGD 154 >gi|149275712|ref|ZP_01881857.1| metal-dependent hydrolase [Pedobacter sp. BAL39] gi|149233140|gb|EDM38514.1| metal-dependent hydrolase [Pedobacter sp. BAL39] Length = 254 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 78/248 (31%), Gaps = 48/248 (19%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHY 81 + K I+ID G PD + + + K+L AI TH H+DH Sbjct: 36 VSVLIETDDKTIVIDSG---------------PDFRYQMLRAKVKDLDAILFTHEHKDHV 80 Query: 82 GAL------HDLWSFLHVPVYASPFAIGLLEAKR-----VYERVSKKIPCISFQAGDKVD 130 L + L ++ +YA+ L+ + + I + Sbjct: 81 AGLDDIRPFNYLLKK-NIDIYATERVQDALKREFSYIFSEHHYPGLPQIDIHTITNEPFF 139 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 +G I + + H + I GD+ +TD ++ E Sbjct: 140 IGKTEIIPLDIMHYKLPILGYRI----------GDFT--------YITDAKTISETSVEK 181 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 ++ NA++ IS +++ I + T S ++ + ++ Sbjct: 182 VMGTKILVVNALQHEQHISHFTLQEAIDFSARIGAEQTYFTHISHNLG-LHEDVEKELPK 240 Query: 251 GRKIVLLG 258 K+ G Sbjct: 241 NVKLAYDG 248 >gi|5031436|gb|AAD38170.1|AF152397_1 beta-lactamase-like protein [Mycobacterium phlei] Length = 243 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 ++ID G FP D V + + +L AI +THAH DH G+ P Sbjct: 32 VLIDAG--FPGHR----DDVLASLRQLGFGPDDLRAILLTHAHVDHLGSAIWFAKNHGTP 85 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 VY +G + + + + + +Q Sbjct: 86 VYCHAAEVGHAKREYLEQVSPLDVAKHIWQP 116 >gi|49477083|ref|YP_035339.1| metal-dependant hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328639|gb|AAT59285.1| conserved hypothetical protein, metal-dependant hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 244 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|116753510|ref|YP_842628.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116664961|gb|ABK13988.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 245 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 65/195 (33%), Gaps = 16/195 (8%) Query: 56 PDITF--IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPVYASPFAIGLLEAKRVYE 112 PD+ + I + A+ THAH DHY D HVPVYA+ + + + + Sbjct: 55 PDLRWQLIKMGISKVDAVIWTHAHYDHYAGFGDFHRVQNHVPVYATRSTLDYVISYLYFL 114 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL---D 169 R + + ++ VNH ETM +++ + +V T D + Sbjct: 115 R----PQRHDVEPLEPFEIAGMEFTLFEVNHPPVETMGVLVSAGGKRVVITSDTNDALSE 170 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR----EGTCISEKGIKKNIYDIMKNAK 225 + + D AI G NA + + + ++ + Sbjct: 171 ESLDIMRDADLFIADAIMPPGYKL--NKHMNADEAISLAHRLNARQTVLTHLSHLYPPHD 228 Query: 226 GCVLVTTFSSSVSRI 240 V + + I Sbjct: 229 EAVKRWPLAHDMMSI 243 >gi|225462815|ref|XP_002266168.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1468 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 138/419 (32%), Gaps = 53/419 (12%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY L WS + ++ S L V + V + Sbjct: 116 FLSHFHSDHYSGLSPKWS--NGIIFCSNTTARL----LVEVLGVSSLFVYPLAVSQPVLI 169 Query: 132 GAFSIESVRVNHSIPETMALVIRSPV-----GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + + NH P + + + P VHTGD++ + L Sbjct: 170 DGCEVALLDANH-CPGAVQFLFKVPGVDGRFERYVHTGDFRFCESMKLEPC--LGEFV-- 224 Query: 187 GNEGILALMCDSTNAMREGTCISEKG----IKKNIYDIMKNAKGCV-----LVTTFSSSV 237 G A+ D+T + S+ I + I I KG + LV T+ + Sbjct: 225 ---GSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGLMKSVLFLVATYV--I 279 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 + R +++I+ + KI + G + SV +G + ++ ++ Sbjct: 280 GKERILLEISRRRNCKIHVDGRKM----SVLRVLGYEDGGVFTEDESKSDVHVVGWNVLG 335 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 T P +M+ + + + + G + N+ + Sbjct: 336 ETWPYFRPNFV-------KMKEIMIERGYSKVVGFVPT-GWTYEVKR--NKFAMRTKDSF 385 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHL--VAHKELALQE--GIACV 413 V S H ++L+ +++RP+ ++ G + H + G+ Sbjct: 386 EIHL---VPYSEHSNYDELREYVKFLRPKRVIPTVGLDIEKLDSKHANAMRKHFAGLVDE 442 Query: 414 PPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAKR--RQLSFVGHLSVN 470 +++ + +E + V + + + +KR ++ + G L+V+ Sbjct: 443 MAIKHEFLKGFQRGCLEADENVENNTRTVLNKELDAEKHVTFSKRKTKESTESGFLAVS 501 >gi|126459656|ref|YP_001055934.1| putative mRNA 3-end processing factor [Pyrobaculum calidifontis JCM 11548] gi|126249377|gb|ABO08468.1| putative mRNA 3-end processing factor [Pyrobaculum calidifontis JCM 11548] Length = 319 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 18/176 (10%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + + +TH H DH ++ L V A+ +E K + G Sbjct: 34 VDFVLVTHGHSDHVS--RYMFKHL---VVATAETFKAIEVKF----GGVPPRRLVTAPGR 84 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 +VG + H I ++ ++ I+ TGD+ + + TD A Sbjct: 85 VFEVGGVEVAVFDAGH-IVGSVMYLVELDGVQILITGDYSVYGSIL----TD----GAEP 135 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSI 243 E L+ ++T ++ + + D+++ G V + + + + + Sbjct: 136 VEKPDILITEATYGDPAYVFPNKADVYNELLDLVERHAGERGVAIAAYPLGKAQEV 191 >gi|331700444|ref|YP_004397403.1| beta-lactamase domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329127787|gb|AEB72340.1| beta-lactamase domain protein [Lactobacillus buchneri NRRL B-30929] Length = 267 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 19/181 (10%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M N+++ L G N+ + ++ D G+S K + + Sbjct: 1 MNNDDMKISVL--ASGSGGNVTYIE----TPDHKVLCDAGLSGKKIEAL--------MNS 46 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPC 120 I ++ ++ ++F+TH H DH L + VYA+ + + Sbjct: 47 IGRDLSDVDSLFVTHEHSDHRLGAGVLARKYGIQVYANEGTWNAMAPRI---GKVADDQK 103 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVT 178 +D+G +ES V+H E V + V D + D + Sbjct: 104 NIIAPDSVMDMGDLDVESFSVSHDAAEPQFYVFHHNNKSFVILTDTGYVSDRMEGVIKDA 163 Query: 179 D 179 D Sbjct: 164 D 164 >gi|148675641|gb|EDL07588.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform CRA_c [Mus musculus] Length = 541 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|74216024|dbj|BAE23700.1| unnamed protein product [Mus musculus] Length = 541 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|70778966|ref|NP_598626.2| 5' exonuclease Apollo isoform a [Mus musculus] gi|73620758|sp|Q8C7W7|DCR1B_MOUSE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link repair 1B protein; AltName: Full=SNM1 homolog B gi|74141057|dbj|BAE22098.1| unnamed protein product [Mus musculus] gi|74152210|dbj|BAE32389.1| unnamed protein product [Mus musculus] gi|169158670|emb|CAQ12169.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Mus musculus] Length = 541 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|65318470|ref|ZP_00391429.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Bacillus anthracis str. A2012] Length = 242 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 19 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 66 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 67 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 120 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 121 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 163 >gi|325982780|ref|YP_004295182.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] gi|325532299|gb|ADZ27020.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] Length = 254 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 37/184 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L LG G +G + + ++ID G ++ Sbjct: 1 MKLRV--LGCSGGVG---SGAHTTAMLLDDDVLIDAGTGVGNLT--------------IE 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH------VPVYASPFAIGLLEAKRVYERVSKK 117 E + + +THAH DH + L + + ++A P + +L+ + Sbjct: 42 EMVRIDHVLVTHAHLDHVAFIPFLVDTVGSMRAKPIIIHAIPATLDILQKHLFNWYLWPD 101 Query: 118 IPCISFQAG-----------DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 I + + I + +H+IP + + S ++V TGD Sbjct: 102 FTKIPVATMPYMRYEALALNQTLCLNQRKITPLPAHHTIP-AVGYQLDSGQASLVFTGDT 160 Query: 167 KLDD 170 +D Sbjct: 161 TTND 164 >gi|149737455|ref|XP_001497134.1| PREDICTED: similar to Cleavage and Polyadenylation specificity factor (CPSF) 100kD subunit isoform 1 [Equus caballus] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|16125064|ref|NP_419628.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] gi|221233791|ref|YP_002516227.1| metallo-beta-lactamase protein [Caulobacter crescentus NA1000] gi|13422058|gb|AAK22796.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] gi|220962963|gb|ACL94319.1| metallo-beta-lactamase protein [Caulobacter crescentus NA1000] Length = 530 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 6/84 (7%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 + + R ++IDCG F + + + A+ +THAH DH Sbjct: 15 TGFCARLVTPRTTVLIDCG-MFQGSKTLKA----LNYQPFPFDAGQVDAVLLTHAHIDHS 69 Query: 82 GALHDL-WSFLHVPVYASPFAIGL 104 G L L + P+YA+ L Sbjct: 70 GLLPKLMLAGFEGPIYATAATRDL 93 >gi|315425048|dbj|BAJ46721.1| metallo-beta-lactamase family protein [Candidatus Caldiarchaeum subterraneum] Length = 218 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + Y +R+ ++ID G D ++ + + R + A++ TH H D Sbjct: 14 SSNSYIVYDEETREAVIIDAG----DDAWLLLET-------LQERRLRVNAVYATHGHFD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL-------EAKRVYERVSKKIPCISFQAGDKVDVG 132 H A+ DL L +P Y + +L + P + G + VG Sbjct: 63 HVMAVDDLKQALKIPFYIHRLDLEILSMAREMTRRFLGIDVGDPPSPDGYIEDGQTIQVG 122 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 S++ + P ++ ++ +GD Sbjct: 123 GKSLKVIHTPGHSPGSVCFY----GDGVLFSGDLLF 154 >gi|291561449|emb|CBL40248.1| Zn-dependent hydrolases, including glyoxylases [butyrate-producing bacterium SS3/4] Length = 214 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 25/160 (15%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG +G N L Y + R ++ D G + V L AI + Sbjct: 11 VGMVGTNCYLV-YDHETKRAAVI-DPGDGAGQIANMAVSLGL-----------KPEAILL 57 Query: 74 THAHEDHYGALHDLWSFLHVPVYASP-----FA---IGLLEAKRVYERVSKKIPCISFQA 125 TH H DH A +L +VP+YA L+ P ++ + Sbjct: 58 THGHFDHIMAAKELKETWNVPIYACEKEIDVLTDGRKSLVAGYFREPYTI--TPDVTVKE 115 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 GD++ + F+ + + I ++ +GD Sbjct: 116 GDELSIAGFTWKVFETPGHTIGSCCYYIEKEE--VLFSGD 153 >gi|291406601|ref|XP_002719640.1| PREDICTED: cleavage and polyadenylation specific factor 2 [Oryctolagus cuniculus] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|115379150|ref|ZP_01466272.1| myofibrillogenesis regulator 1 [Stigmatella aurantiaca DW4/3-1] gi|310820414|ref|YP_003952772.1| beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|115363845|gb|EAU62958.1| myofibrillogenesis regulator 1 [Stigmatella aurantiaca DW4/3-1] gi|309393486|gb|ADO70945.1| beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 220 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 16/133 (12%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 M+ +Y G+ + + +++D P D+P ++ ++ K L+ F++H H+ Sbjct: 16 MDNFVYLVGAADAPEVLVVD-----PAWDVPAIERAMA------EDGKRLVGAFVSHCHK 64 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH L +L S VPVYA + E R + + G+ + VG + + Sbjct: 65 DHINGLPELLSRHDVPVYAQREEVAFSEDLRALGGALRPVG-----PGEALTVGPRTFLA 119 Query: 139 VRVNHSIPETMAL 151 + P + L Sbjct: 120 LHTPGHTPGSHCL 132 >gi|296215760|ref|XP_002754257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Callithrix jacchus] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|118476689|ref|YP_893840.1| metal-dependant hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118415914|gb|ABK84333.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 244 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG GV +I ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|109084634|ref|XP_001092942.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform 2 [Macaca mulatta] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|34101288|ref|NP_059133.1| cleavage and polyadenylation specificity factor subunit 2 [Homo sapiens] gi|114654441|ref|XP_001147277.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform 3 [Pan troglodytes] gi|114654443|ref|XP_001147356.1| PREDICTED: cleavage and polyadenylation specific factor 2 isoform 4 [Pan troglodytes] gi|51338827|sp|Q9P2I0|CPSF2_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|119601886|gb|EAW81480.1| cleavage and polyadenylation specific factor 2, 100kDa, isoform CRA_a [Homo sapiens] gi|119601888|gb|EAW81482.1| cleavage and polyadenylation specific factor 2, 100kDa, isoform CRA_a [Homo sapiens] gi|193786082|dbj|BAG50953.1| unnamed protein product [Homo sapiens] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|307107345|gb|EFN55588.1| hypothetical protein CHLNCDRAFT_134115 [Chlorella variabilis] Length = 886 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 109/347 (31%), Gaps = 43/347 (12%) Query: 54 VFPDITFIMKERKNL------MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 + P +F++ NL F+TH H DHY L F +Y SP L++ Sbjct: 550 LVPGTSFVVDRFSNLPQQSPHRHWFLTHFHADHYKGLTG--RFDRGTLYCSPPTALLVQQ 607 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG-NIVHTGDW 166 + K + V + + NH P + ++ P ++HTGD Sbjct: 608 QLR----VKPACIRCVPLNSPILVEGVRVTFLDANH-CPGAVMILFEPPGCRPVLHTGDC 662 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG 226 + ++ ++ + +L A+ G ++ D+T E S++ + + D Sbjct: 663 R-----LIPEMQHEAALAAV--RGQADIILDTTYCSPEYAFPSQQEVLRFAIDA------ 709 Query: 227 CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF 286 V + + + R + L+R + V+ + Sbjct: 710 ---VKAEAFNPKTLFLFGSYTIGKERLFLEAARVLQRRIYVSAAKRKV---------LDC 757 Query: 287 GLYPREQLIVIATGSQ-GEPRSALAQLSRGEM--RNVKLAEKDTVIFSSRAIPGNEVAIG 343 P+E ++ T + + + + +K G Sbjct: 758 LELPQEYASLLTTDDHTTNLHAVPLWMVSQKHMAKLLKHYRGRFSTAVGFQPTGWTHQRD 817 Query: 344 HIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + + + V S H ++L++ W RP ++ Sbjct: 818 ASQAGARGRRRQKGT-IITYQVPYSEHSSFSELRQFVDWFRPVSIIP 863 >gi|222094815|ref|YP_002528875.1| hypothetical protein BCQ_1153 [Bacillus cereus Q1] gi|221238873|gb|ACM11583.1| conserved hypothetical protein [Bacillus cereus Q1] Length = 244 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFQSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTIHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|194017744|ref|ZP_03056354.1| YqgX [Bacillus pumilus ATCC 7061] gi|194010644|gb|EDW20216.1| YqgX [Bacillus pumilus ATCC 7061] Length = 212 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP-----FAIGLLE--AKRV 110 I+++ +++ +A+ +THAH DH GA ++ + VP+Y L A+ + Sbjct: 38 ISYVKEKQLTPLAVLLTHAHFDHIGAADEVRAEWGVPLYVHENEKEWLTNAELNGSARLI 97 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 ++ K + + +G+F++E P +++ I Sbjct: 98 GNGITVKEAEKLITSEGTLQIGSFTLEMFHTPGHSPGSVSYYSAEEGFVI 147 >gi|149531954|ref|XP_001507374.1| PREDICTED: similar to Cleavage and Polyadenylation specificity factor (CPSF) 100kD subunit [Ornithorhynchus anatinus] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLKKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|71895649|ref|NP_001026671.1| 5' exonuclease Apollo [Gallus gallus] gi|73620753|sp|Q5QJC3|DCR1B_CHICK RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link repair 1B protein; AltName: Full=SNM1 homolog B gi|38731581|gb|AAR27405.1| SNM1B [Gallus gallus] Length = 457 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 18/194 (9%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DH L WS P+Y SP LL + + G V Sbjct: 28 FLSHMHSDHTVGLSSTWSR---PLYCSPLTARLLHHRLK----VPTRWIRPLEVGQSHAV 80 Query: 132 G-AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 G ++ + NH P ++ + G I++TGD++ A+ Sbjct: 81 GEEVTVTLLDANH-CPGSVMFLFEGAFGTILYTGDFRYSPAM--------QREPALSGRR 131 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 I L D+TN G S +++ +V S + + ++D+A + Sbjct: 132 IDRLYLDNTNCRPHGALPSRSRAALQAAQLIRRHPQHRVVIGVYS-LGKEELLVDLALEF 190 Query: 251 GRKIVLLGSSLKRV 264 G +V+ S L+++ Sbjct: 191 GTWVVVSPSRLEQM 204 >gi|224092047|ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|222855429|gb|EEE92976.1| predicted protein [Populus trichocarpa] Length = 740 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 112/343 (32%), Gaps = 41/343 (11%) Query: 55 FPDITFIMKERKNLMA----IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 P F + K L F+TH H DHY L SF H +Y S L+ K Sbjct: 413 IPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLT--RSFCHGKIYCSLITAKLVNLKI- 469 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 K+ + + + NH P ++ ++ P ++HTGD++ Sbjct: 470 ---GIPWDSLHVLPLNQKICIAGVDVTCLDANH-CPGSIIILFEPPNGKAVLHTGDFRFS 525 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGCV 228 + + V + I L+ D+T + E I+ I I A Sbjct: 526 EKMVTMPV--------LQMSSIHTLILDTTYCNAQYDFPKQEAVIQFVIEAIQAEAFNPK 577 Query: 229 LVTTFSS-SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 + S ++ + R +++A + +K+ + ++ + + + + + Sbjct: 578 TLFLIGSYTIGKERLFLEVARVLHKKVYV-------NMAKFRLLECLGFPEEDMRWITLN 630 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 P LA R + + + A + T+I + G G Sbjct: 631 EQESH--------IHVVPMWTLASFKRLKHLSSQYAGRFTLIVAFSPT-GWTFGKGK--- 678 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + V S H +L+ +++ P+ ++ Sbjct: 679 KKSPGRRCQQGTIIRYEVPYSEHCSFTELREFVKFVSPENIIP 721 >gi|195391946|ref|XP_002054620.1| GJ24554 [Drosophila virilis] gi|194152706|gb|EDW68140.1| GJ24554 [Drosophila virilis] Length = 654 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 47/368 (12%), Positives = 109/368 (29%), Gaps = 69/368 (18%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 ++D G F P+ T F++H H DHY L Sbjct: 242 VEDTTFVVD-GFQFGD---------IPNATHY----------FLSHYHGDHYVG---LTR 278 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P+Y SP L+ + + + ++ NH P + Sbjct: 279 KFAHPLYMSPITARLVRTFI----PIDSQYLHEIAVDQSITLNDIEVTAIDANH-CPGAI 333 Query: 150 ALVIRS-PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 L+ + I+HTGD++ + + I L D+T + Sbjct: 334 MLIFKFSTGKCILHTGDFRASFEMESLPIF-------WNQPNIDLLYLDTTYLSQNYDFC 386 Query: 209 SEKGIKKNIYDIM-----KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKR 263 + + ++ K+A +L S + + + + + E+ ++ + Sbjct: 387 HQSDSIYRVCSLVRQFHEKHASKRILHVCGSYLIGKEKVWLALVEEFRLRVWTEPN---- 442 Query: 264 VVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLA 323 + + +L S +I + S + Q + + Sbjct: 443 ---RRKAIDCLDWPELKHSLCDDPFEANLHVINMGKISYPQLDQYFKQFEGHYDMLLGIR 499 Query: 324 EKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWI 383 +S+ G +++ ++ S H +L+R +++ Sbjct: 500 P-SGWEKNSKPSYGKRISVIGVE--------------------YSEHSSYKELERFVRFL 538 Query: 384 RPQVLVAI 391 +P+ +++ Sbjct: 539 KPKNVIST 546 >gi|183598379|ref|ZP_02959872.1| hypothetical protein PROSTU_01771 [Providencia stuartii ATCC 25827] gi|188020555|gb|EDU58595.1| hypothetical protein PROSTU_01771 [Providencia stuartii ATCC 25827] Length = 215 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 24/184 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ + +++D G + + I I + L I +TH H D Sbjct: 14 NCQVI--WDENTMEAVIVDPG---GEAEKL--------IAAIEERGLKLTKILLTHGHAD 60 Query: 80 HYGALHDLWSFLHVPVYAS-PFAI----GLLE--AKRVYERVSKKIPCISFQAGDKVDVG 132 H GA + P+Y L E A E P + G V G Sbjct: 61 HIGATAIISKHFSAPIYGPQKEDAFWIEALAEQHAMFNIEGGPSFTPDYWLEEGQTVHCG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEG 190 + + + P ++ + ++ GD +K D +L A Sbjct: 121 TMAFDVLHCPGHTPG--HIIFVNHADKLISMGDVLFKGGVGRSDFPRGDHQALIASIKNK 178 Query: 191 ILAL 194 +L L Sbjct: 179 VLPL 182 >gi|330902434|gb|EGH33477.1| Beta-lactamase-like protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 105 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 16/103 (15%) Query: 6 LVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F LG G G S+ +I++DCG S + + + + Sbjct: 1 MRFAVLGSGSRGNG-------TLVASNDTYILVDCGFSLRETER--------RLARLGVS 45 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 L AI +TH H DH + L +VPVY S + + Sbjct: 46 ASQLSAILVTHEHADHVHGVGLLSRRYNVPVYLSSGTLRGMRK 88 >gi|317056336|ref|YP_004104803.1| hydroxyacylglutathione hydrolase [Ruminococcus albus 7] gi|315448605|gb|ADU22169.1| hydroxyacylglutathione hydrolase [Ruminococcus albus 7] Length = 215 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 15/129 (11%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYE----- 112 + L IF+TH H DH GA+ DL VY P +L + Sbjct: 42 LENNNCTLKKIFLTHGHFDHIGAVADLVEATGCEVYIHPLDEKMLRSGDEMLAVHFRSRG 101 Query: 113 RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 S F D + + + + P ++ + G+++ TGD + Sbjct: 102 YKSYNGDVKLFTENDIIRLDELEFDILETPGHTPGSVCYI----CGDVMFTGDTLFNRS- 156 Query: 173 ILGDVTDKD 181 TD + Sbjct: 157 --IGRTDLE 163 >gi|152990791|ref|YP_001356513.1| hypothetical protein NIS_1046 [Nitratiruptor sp. SB155-2] gi|151422652|dbj|BAF70156.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 197 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 24/172 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + K ++D GV ++++ KN +AI TH H D Sbjct: 14 NCYIV----TINGKDFIVDPGVG--------------ATSWVLANVKNPIAILNTHGHFD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +L L++P+ L+ + ++ K P I +D+ I + Sbjct: 56 HVWSNAELKEKLNIPIVIHEKDAFFLQKDQFGMQMPKSEPDILVHGDQTLDIAGEKITFI 115 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 P + +GD+ + +D + + A + Sbjct: 116 HFPGHTPGCSVIDFGDFWC----SGDFIFKGSIGRVDFPYSDPEDMKASLKK 163 >gi|73962293|ref|XP_537353.2| PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 1 [Canis familiaris] Length = 782 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|312898879|ref|ZP_07758267.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] gi|310620041|gb|EFQ03613.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] Length = 211 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 28/194 (14%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 LPLG + N + ++ +ID P D +D D+ + L Sbjct: 8 LPLGPLE---TNCYIV--YDDVEKEAFLID-----PAWDYEQIDKAL-DVLGVT-----L 51 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKIPCIS 122 +F+TH H DH GAL ++ + VPVY + L+ + + + P Sbjct: 52 RFVFLTHGHADHIGALQEVRNHKDVPVYIGKGDVDLIANSRNNLSMFLGKEIVITSPEHI 111 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDK 180 G+ ++ + + P + L ++ GD ++ D Sbjct: 112 VTDGEVINFAGVPFKVIETPGHTPGGLCLY----GAGLLFAGDTLFRCSVGRTDFYGGDS 167 Query: 181 DSLCAIGNEGILAL 194 L + E ++ L Sbjct: 168 HVLVSSIEEKLMKL 181 >gi|324325214|gb|ADY20474.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 244 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E+ I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ESGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|123367345|ref|XP_001296993.1| DNA repair metallo-beta-lactamase family protein [Trichomonas vaginalis G3] gi|121876902|gb|EAX84063.1| DNA repair metallo-beta-lactamase family protein [Trichomonas vaginalis G3] Length = 356 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 23/222 (10%) Query: 72 FITHAHEDHYGALHDLWSFLHVP--VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 F++HAH DH + P ++ +P ++ Y R++K I + Sbjct: 39 FLSHAHSDHIAGIP----SFKPPRVLHCTPITAKII--LLRYPRLAKCIQIHE--YNSEF 90 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + A +I + NH+ P + + +P I+HTGD++ D+ +S+ Sbjct: 91 IIDAITIRIINANHT-PGSCMFLFETPLGRKILHTGDFRADNTL-------IESIKKFCP 142 Query: 189 EGILALMCDSTNAMREGTCISEKGIKK-NIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 + L D T A + +S + I +++N K L + ++ + ++ I+ Sbjct: 143 --VNQLFIDCTYATSKLLFLSRQECINWTIERVIENMKSNTLTLIGTYTLGKEELVLAIS 200 Query: 248 EQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 ++ I + + I G + +Y Sbjct: 201 NKLSIPI-YAPKDRYKGIVEMIKCGYCSESCFTNDPTKTRVY 241 >gi|73962299|ref|XP_848582.1| PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 2 [Canis familiaris] Length = 776 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|86152045|ref|ZP_01070257.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86153407|ref|ZP_01071611.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613616|ref|YP_001000498.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005434|ref|ZP_02271192.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315124331|ref|YP_004066335.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840830|gb|EAQ58080.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85843133|gb|EAQ60344.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249341|gb|EAQ72301.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315018053|gb|ADT66146.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 198 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 20/151 (13%) Query: 21 MALYG---YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 +Y Y + + +ID PG D + FI K K +AI TH H Sbjct: 8 CGVYETNCYILFTPKGEFIID----------PGTDALL----FIKKHVKKPLAILNTHGH 53 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + ++P+Y +L + D +++ + Sbjct: 54 YDHIWDNAKVKKEYNIPIYIHKNDAFMLHDDF-NQGYDSSDADFLVDNEDILNICGVDFK 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P I NI+ +GD+ Sbjct: 113 FHFLPGHTPGCTM--IEIVGKNIMFSGDFLF 141 >gi|149276938|ref|ZP_01883081.1| hypothetical protein PBAL39_16199 [Pedobacter sp. BAL39] gi|149232607|gb|EDM37983.1| hypothetical protein PBAL39_16199 [Pedobacter sp. BAL39] Length = 249 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 78/249 (31%), Gaps = 40/249 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N L + G G N + S I+IDCG + L G + + Sbjct: 7 NNALQIIGCGDAFASGGNFHT-CFHLRSGETNILIDCGAT----TLHG-------LRRLQ 54 Query: 63 KERKNLMAIFITHAHEDHYGALHDLW-------SFLHVPVYASPFAIGLLEAKRVYERVS 115 + + I I+H H DHY + L + + ++A Sbjct: 55 IDPDQIDIILISHLHGDHYAGIPFLLMDAAVRKRQRKLKIITPNTGKARIKALLQLLYPG 114 Query: 116 KK------IPCISFQAGDKVDVGAFSIESVRVNHS-IPETMALVIRSPVGNIVHTGDWKL 168 + I +++ + + + +++ V HS + L I + ++GD Sbjct: 115 SDKTEQLPVEYIEYKSYEILQLDGIQVQAYPVVHSKAALSHGLRITIGHQVLSYSGDTSW 174 Query: 169 DDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCV 228 D+ I ++G +C+ + + + I + + Sbjct: 175 TDNLIPL------------SDGADLFICECN--FYNTSTPTHMNYLDLVSKISQLNFNKI 220 Query: 229 LVTTFSSSV 237 L+T S + Sbjct: 221 LLTHLSEEM 229 >gi|313885402|ref|ZP_07819152.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619132|gb|EFR30571.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 208 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 21/149 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + ++ D G + D I I +AI +TH H D Sbjct: 14 NTYVLS---DEIGQALIFDPG---DQADQL--------INQIEAAGLKPIAICLTHCHFD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIG-------LLEAKRVYERVSKKIPCISFQAGDKVDVG 132 H GA+ L +PVYA L A V + +Q +G Sbjct: 60 HIGAVDALRDHFEIPVYAPELEADWLSDPNLNLSAGMGLPPVIQAPADYLWQEMGPQTIG 119 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIV 161 +F+ E V P + + Sbjct: 120 SFNFELAHVPGHSPGHLIYHFAQEDLVVC 148 >gi|227551306|ref|ZP_03981355.1| hydroxyacylglutathione hydrolase [Enterococcus faecium TX1330] gi|227179586|gb|EEI60558.1| hydroxyacylglutathione hydrolase [Enterococcus faecium TX1330] Length = 221 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G I N L + ++ID P +D + K + +AI +T Sbjct: 22 GMIEENCYLV----YNEEALLIID-----PGEDAEQIKQEI------KKTNQQPVAILLT 66 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH GA+ L ++ +PVY SP LE K + + + + V Sbjct: 67 HTHYDHIGAVEPLRAYYQIPVYVSP-----LEQKWLGDPILNLSGLGRHDDIADIIVSPA 121 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E +++ V+ +P +I + + DD Sbjct: 122 EYEFEMKTYTLGNMSFRVVPTPGHSIG-SVSFIFDD 156 >gi|196037225|ref|ZP_03104536.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|229090142|ref|ZP_04221392.1| Beta-lactamase domain protein [Bacillus cereus Rock3-42] gi|196031467|gb|EDX70063.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|228693219|gb|EEL46930.1| Beta-lactamase domain protein [Bacillus cereus Rock3-42] Length = 244 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|298386576|ref|ZP_06996132.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] gi|298260953|gb|EFI03821.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] Length = 247 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 35 VETEDARILIDCG---------------PDFRAQVLHLPFEKIDGVLITHEHYDHVGGLD 79 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + +++VG + Sbjct: 80 DLRPFCRFGAVPIYAEEYVARALRLRMPYCFVDHRYPGVPDIPLQEIEVGHAFSIHHTEV 139 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + EGI L+ Sbjct: 140 VPLRVMH----GRLPILGYRIGRLGYITDMLTMPEESYEQL-----------EGIDVLIM 184 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + +++ + + S + + ++ + Sbjct: 185 ---NALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHDMG-LHKKVEKELPENIHLTY 240 Query: 257 LGSSLK 262 G + Sbjct: 241 DGMEII 246 >gi|30261204|ref|NP_843581.1| hypothetical protein BA_1088 [Bacillus anthracis str. Ames] gi|47526362|ref|YP_017711.1| hypothetical protein GBAA_1088 [Bacillus anthracis str. 'Ames Ancestor'] gi|49184037|ref|YP_027289.1| hypothetical protein BAS1016 [Bacillus anthracis str. Sterne] gi|165871834|ref|ZP_02216477.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167635358|ref|ZP_02393672.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|167640192|ref|ZP_02398458.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|170688074|ref|ZP_02879286.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|170707677|ref|ZP_02898129.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|177654171|ref|ZP_02936144.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190566596|ref|ZP_03019513.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227816062|ref|YP_002816071.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228926238|ref|ZP_04089313.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229601914|ref|YP_002865631.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254682736|ref|ZP_05146597.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254734153|ref|ZP_05191866.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254740203|ref|ZP_05197895.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254753542|ref|ZP_05205578.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254758640|ref|ZP_05210667.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|30254818|gb|AAP25067.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47501510|gb|AAT30186.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177964|gb|AAT53340.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|164712411|gb|EDR17945.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167511793|gb|EDR87173.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|167529186|gb|EDR91939.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|170127452|gb|EDS96327.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|170667969|gb|EDT18720.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|172080878|gb|EDT65958.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190562148|gb|EDV16116.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227006722|gb|ACP16465.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228833491|gb|EEM79053.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266322|gb|ACQ47959.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 244 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818] Length = 1437 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 56/353 (15%) Query: 72 FITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 F++H H DHYG L PVY S L+ A + + + Sbjct: 31 FLSHFHADHYG---KLNKDWQWGPVYCSQTTAKLVAAVLEVDANYLRPLPLDTWVD---V 84 Query: 131 VGAFSIESVRVNHSIPETMALVIRSP------VGNIVHTGDWKLDDDAILGDVTDKDSLC 184 + + NH P + +H+GD + + Sbjct: 85 TATCRVALIDANH-CPGAAMFLFHVRETEGGLEHWYLHSGDCRYTPAWKQHPL------- 136 Query: 185 AIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKG-----------CVLVTTF 233 + N + L D+T + T ++ + + + D + LV T+ Sbjct: 137 -LQNVALDILFLDTTYCDPKHTFPPQEQVVRFVSDTVSQYMHEDQQRADGVDTLFLVATY 195 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSS--LKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 S V + + + + + + +V+ + + + + V + + + Sbjct: 196 S--VGKEKILTQLVKDQHKPLVVSEKKRLMMQQLDLDWPVPFDEMFTSDHLASNVHVVGW 253 Query: 292 EQLIVIATG------SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA-------IPGN 338 L +A G + R V ++ + Sbjct: 254 HMLGTMAAGGWTFLPDYETLHDMIDHYKPRYHRIVAFVPTGWTYVIAKEHQRRQALAQHD 313 Query: 339 EVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 E +G + ++ ++ V V S H +L+ W++P +V Sbjct: 314 EEVLGVLHHKETKRNVTVFTVP------YSEHSNYLELREFVAWLKPARVVPT 360 >gi|198447194|emb|CAQ53840.1| metallo-beta-lactamase AIM-1 [Pseudomonas aeruginosa] Length = 303 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 12/138 (8%) Query: 26 YGSPSSRKWIMI--DCGVSFPKDDLPGV-DLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 Y +++ D G P + +I + +++ AI +H H DH G Sbjct: 52 YVGTCGISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAG 111 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRVY---------ERVSKKIPCISFQAGDKVDVGA 133 +L +L PVYA AI L+ E V+ ++ V VG Sbjct: 112 SLAELQKATGAPVYARAPAIDTLKRGLPDRTDPQFEVAEPVAPVANIVTLADDGVVSVGP 171 Query: 134 FSIESVRVNHSIPETMAL 151 ++ +V P + Sbjct: 172 LALTAVASPGHTPGGTSW 189 >gi|156399461|ref|XP_001638520.1| predicted protein [Nematostella vectensis] gi|156225641|gb|EDO46457.1| predicted protein [Nematostella vectensis] Length = 300 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 15/194 (7%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER---VSKKIPCISFQAGDK 128 F++HAH DH L W+ +Y S +L K V+ + D+ Sbjct: 28 FLSHAHADHTQGLTSSWTKYK--IYCSEITKRILMHKLNVNEDLLVALPLGEPVVLPLDE 85 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++ + NH P + + G I++TGD++ +L + ++ Sbjct: 86 EGREMLTVTLLDANH-CPGAVMFLFEGYFGTILYTGDFRFKPAMLLHE--------SLKG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+T ++ K I+DI++ G ++ ++ + ++ IA Sbjct: 137 KQIDKLYLDNTYCHPSCNFPTKTKTMKLIFDIIRRRLGDDII-IPLRTLGKEDLLVKIAL 195 Query: 249 QIGRKIVLLGSSLK 262 + I + ++ Sbjct: 196 EFNCWIGVTPKKME 209 >gi|71908970|ref|YP_286557.1| Beta-lactamase-like [Dechloromonas aromatica RCB] gi|71848591|gb|AAZ48087.1| Beta-lactamase-like protein [Dechloromonas aromatica RCB] Length = 255 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 43/200 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSS---RKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +L LG G IG + +S I+ID G + Sbjct: 1 MKLRV--LGCSGGIGG-----RHQRTTSFLVDHDILIDAGTGVGELS------------- 40 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYERV 114 + E + +F+THAH DH +L + + VY + + L + Sbjct: 41 -IAEMAAIDHVFLTHAHLDHIVSLPLMIDSVGDRRRKPLMVYGTQAVLDTLRQHIFNWSI 99 Query: 115 SKK-----------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 + + + G V +G I ++ V+H++P + + S ++V + Sbjct: 100 WPDFSVLPRADQPFMRYQTIETGATVTLGDRGISALPVDHTVP-AVGYCLDSGAASLVFS 158 Query: 164 GDWK-LDDDAILGDVTDKDS 182 GD D + D Sbjct: 159 GDTGPCDAFWQGLNRLDNLR 178 >gi|47228753|emb|CAG07485.1| unnamed protein product [Tetraodon nigroviridis] Length = 386 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 107/344 (31%), Gaps = 65/344 (18%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR---VYERVSKKIPCISFQAGDK 128 F++H H DH L WS P+Y S LL K ++ D Sbjct: 30 FLSHMHSDHTVGLTSTWSHR--PIYCSAITAALLRLKLQVKERWIHPLELDEPCVLPLDD 87 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW----------KLDDDAILGDVT 178 + ++ + NH P ++ + + G+I++TG W + + L Sbjct: 88 IGKETMTVTLMDANH-CPGSVMFLFQGYFGSILYTGQWDARTGLHLQLIFRNISNLFFAG 146 Query: 179 DKD----SLCAIG---NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVT 231 D L N I L D TN + S + + I +I++ +V Sbjct: 147 DFRYTPSMLREPCLRTNITIDVLYLDDTNCDPNRSIPSRQSATQQIKEIIRRHPTHCVVI 206 Query: 232 TFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPR 291 +G++ +LL +++ + + V ++ + + F P Sbjct: 207 GLY--------------ALGKESLLLELAMEFKTWIEVSVDRMETLKALELPDVFTTDPG 252 Query: 292 EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVE 351 I + S+ + + K ++ +SR + Sbjct: 253 AGRIRVVEQSEIRAAAF--------HQWNKEEPTLAILPTSRPL---------------- 288 Query: 352 QGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEP 395 V V S H +L+ ++P +V I G Sbjct: 289 ----VSFHPNIYVVPYSDHSSYQELEDFVSALQPTDVVPIVGNH 328 >gi|224373547|ref|YP_002607919.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] gi|223588994|gb|ACM92730.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] Length = 193 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 28/174 (16%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 GE N + + I+ID PGVD F+ + K+ +AI Sbjct: 8 CGEFYTNCYIV-------DRKIIID----------PGVDA----FEFVKEHVKDPLAIIN 46 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH + + +P+Y +L K I +G Sbjct: 47 THGHFDHMWDDKKIKEYYGIPIYIHKNDAFMLTEDPFGYNPPKVEADILMDE-GVYKIGD 105 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 + +E P ++ + I + +GD+ D + ++ + Sbjct: 106 YDVEIKHFPGHTPGSITIEIGDE----MFSGDFIFDGSIGRVDFPYSNPKDMKK 155 >gi|149182231|ref|ZP_01860712.1| metallo-beta-lactamase family protein [Bacillus sp. SG-1] gi|148850090|gb|EDL64259.1| metallo-beta-lactamase family protein [Bacillus sp. SG-1] Length = 269 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 S +++++D G+ P + ++ + AI +TH H DH GAL Sbjct: 36 NPRESNEFVLVDAGM--PDSESM---IMEAAKERFGENAV-CKAIILTHGHFDHVGALKG 89 Query: 87 LWSFLHVPVYASPF 100 L VPVYA Sbjct: 90 LLKKWDVPVYAHSL 103 >gi|283957208|ref|ZP_06374670.1| putative hydrolase [Campylobacter jejuni subsp. jejuni 1336] gi|283791280|gb|EFC30087.1| putative hydrolase [Campylobacter jejuni subsp. jejuni 1336] Length = 198 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 21 MALYG---YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 +Y Y + + +ID PG D + FI + KN +AI TH H Sbjct: 8 CGVYETNCYILFTPKGEFIID----------PGTDALL----FIKQHVKNPLAILNTHGH 53 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + ++P+Y +L + D +++ + Sbjct: 54 YDHIWDNAKVKKEYNIPIYIHKNDAFMLHDNF-NQGYDSSDADFLVDNEDILNICGIDFK 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P I NI+ +GD+ Sbjct: 113 FHFLPGHTPGCTM--IEIVGKNIMFSGDFLF 141 >gi|315144784|gb|EFT88800.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2141] Length = 208 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I++ K AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEIIRLGKKPAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|163789467|ref|ZP_02183906.1| metallo-beta-lactamase family protein [Carnobacterium sp. AT7] gi|159875321|gb|EDP69386.1| metallo-beta-lactamase family protein [Carnobacterium sp. AT7] Length = 204 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 29/152 (19%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLM----A 70 G I N + K +++D P D+ I K L A Sbjct: 10 GRIEENCYVV----YQEGKALIVD-----PGDE----------FVAIKKVLDRLNVTPTA 50 Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPF------AIGLLEAKRVYERVSKKIPCISFQ 124 I +TH H DH GAL ++ +PVY S L + + + F+ Sbjct: 51 ILLTHTHYDHIGALEEVRKTYTIPVYVSDLEQAWLGNAILNLSINSGHPFTAEPAEYEFE 110 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 D+ F + V P ++ V Sbjct: 111 LFKTYDIEGFQFKVVPTPGHSPGGVSFVFADF 142 >gi|123476407|ref|XP_001321376.1| hypothetical protein [Trichomonas vaginalis G3] gi|121904201|gb|EAY09153.1| hypothetical protein TVAG_363680 [Trichomonas vaginalis G3] Length = 700 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 15/101 (14%) Query: 1 MKNEE--LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDI 58 M+++ + F PL G + + Y ++DCG + D DI Sbjct: 1 MESDTTSISFQPLSGAQ----STTPFAYLLHVDEFTFLLDCGWT--------EDFRLEDI 48 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYAS 98 ++ ++ A+ ++HA +H GAL L S L P++A+ Sbjct: 49 QTQIEICSHVNAVLLSHASIEHIGALPYLCSHGLSAPIFAT 89 >gi|330964805|gb|EGH65065.1| hypothetical protein PSYAC_09147 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 480 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 49/266 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + + SS ++IDCG S + G V P F + + + A+ Sbjct: 10 GAVDTVTGSCHQLRMDASSS---LLIDCG-SVQERGASG--EVAP-FGF---DPEAIRAL 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQ 124 +TH H DH G + +L + P+ S + LL K + ++ Sbjct: 60 LVTHVHNDHVGRIPELLASGYEGPILCSEPSAHLLPLVMEDSLKIQFAHDPEQAERYLAL 119 Query: 125 AGDKVDVGAF--------------SIESVRVNH-----SIPETMALVIRSPVGNIVHTGD 165 ++ F + R H I + + +V +GD Sbjct: 120 INKRIIALPFDNWFSLVDRESLHCRVRLQRAGHILGSAYIECDLHYPLEGRSMRVVFSGD 179 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS--EKGIKKNIYDIMKN 223 L E L+ +ST R S + +++ I +++ Sbjct: 180 LGASHTPFLP--------APKPPEHADILVLESTYGDRLHEDRSIRQHELERIIDRALED 231 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 232 -NGTVLIPAFS--IGRTQELLYELED 254 >gi|227873619|ref|ZP_03991857.1| conserved hypothetical protein [Oribacterium sinus F0268] gi|227840537|gb|EEJ50929.1| conserved hypothetical protein [Oribacterium sinus F0268] Length = 410 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 59/201 (29%), Gaps = 47/201 (23%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + I++D G+ L +I + A +TH HEDH GAL + Sbjct: 154 ESNDGSLIVVDGGLKTNAPYL---------AKYIKDRGGKVAAWLLTHPHEDHVGALAVI 204 Query: 88 WSF---------LHV-P--VYAS--PFA----------IGLLEAKRVYERVSKKIPCISF 123 ++ P +Y P A I +++ Sbjct: 205 LEQQKKEGHPDYYNIDPGQIYYGFAPLAFYEQYEPAHRIPMMKEIMEDLAQYDSAKRHES 264 Query: 124 QAGDK-VDVGAFSIESVRVNHSIP------ETMALVIRSPVGNIVHTGDW-------KLD 169 G ++E + +SIP ++ +I ++ TGD ++ Sbjct: 265 SPAGTSFTYGNVAVEVLNTPYSIPIDSGNNSSVCYMITINGKKLLITGDLPYEAAGKLME 324 Query: 170 DDAILGDVTDKDSLCAIGNEG 190 + D + G G Sbjct: 325 ERGADKLKADIVQMAHHGQHG 345 >gi|225865069|ref|YP_002750447.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|225786676|gb|ACO26893.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] Length = 285 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GHPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVY I L ++ Y + + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYGHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPGFRWIHTPGHTPGHISLFR 185 >gi|332158416|ref|YP_004423695.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] gi|331033879|gb|AEC51691.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] Length = 257 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 6/116 (5%) Query: 56 PDITFIMKERK-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPF----AIGLLEAKR- 109 PD+ + ++ + + ITHAH DH + DL F + + ++ A L Sbjct: 52 PDLHYHLERIDSEVKLVLITHAHFDHIFGIPDLQVFKRLKIASNKLGIETAKALARLAFN 111 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + I + + + V HSI + +I I TGD Sbjct: 112 DEMPKGYEWEYIELEFFKEYKFDDVKVMHFPVPHSIEMSGGFLIEINNKRIAVTGD 167 >gi|228470247|ref|ZP_04055151.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] gi|228307990|gb|EEK16865.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] Length = 269 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 18/156 (11%) Query: 6 LVFLPL--GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 + F+ L G G N + ++ID G++ L + + ++ Sbjct: 2 IRFMSLASGSTG----NCYYLEHDGQG----LLIDAGIA-----LYDIKAGLEQASLSIE 48 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 ++ AI +TH H DH + L + +PVYA+ L+ R ER+ Sbjct: 49 H--DVQAILLTHNHADHARTVGKLANRYQLPVYATLPVQCGLDHMRGMERIQHDRRYAIE 106 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 +G + V H + + I S G Sbjct: 107 PEVPFELIG-LVVTPFSVPHDSADNVGYHISSEDGF 141 >gi|224029987|gb|ACN34069.1| unknown [Zea mays] Length = 438 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 60/403 (14%), Positives = 131/403 (32%), Gaps = 25/403 (6%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F+TH H+DH L + + H P+Y SP LL + S P + Sbjct: 17 AYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDASLLRPLAPGASASIY 76 Query: 130 DVGA-------FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + ++ H P ++ + R +G +++TGD++ + +D Sbjct: 77 LFSPSSGQSLSLHVTAIPALH-CPGSLMYLFRGDLGCMLYTGDFRWELGCDEARRAKQDL 135 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+ + I L D+T + + + DI+++ ++ + + + Sbjct: 136 LDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRSHPDHEVIIGVDT-LGKEDL 194 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 ++ I+ + KI + L+ + + ID S PR + + + Sbjct: 195 LLHISRALQTKIWVWPQRLQTIHLLGIDENR-DIFTTQTSLTRIRAVPRYSVTIDNLEAL 253 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVI---FSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 + L K +E S ++I + G + + + Sbjct: 254 NTVCPTIGILPSAIPCLWKSSEGKAKSKGRSSVKSIRSSGRGEGLTEMDCNPLSPPKLFD 313 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVA-------IHGEPLHLVAHKELALQEGIAC 412 + S H ++L+ +RP V+ + P H H L L + Sbjct: 314 KDSYTLPYSEHACFSELEDFMHTVRP-WTVSGIVSSSFCYVNPRHHFRH--LCLDNNVND 370 Query: 413 VPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGI 455 + + D ++ + + + + + Sbjct: 371 ETDMTP--IKNKGRDNDKLTPKRWRNGSVTPKERKVRISSSSL 411 >gi|115522748|ref|YP_779659.1| beta-lactamase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516695|gb|ABJ04679.1| beta-lactamase domain protein [Rhodopseudomonas palustris BisA53] Length = 244 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 73/266 (27%), Gaps = 50/266 (18%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCGVS-FPKDDLPGVDLVFPDIT 59 +L F+ G G G G + +IDCG S P G+ Sbjct: 1 MQLRFVGSGDAFGSG--GRLNTCFHVSGQQVN--FLIDCGASSLPALKRYGI-------- 48 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGLLEAKRVYER 113 R ++ + ITH H DH+G + L V A P I L + + Sbjct: 49 ----SRDDIDLVLITHFHGDHFGGVPFLLLEAQFAKRKRPLVIAGPHGIDLRLTRLMEAL 104 Query: 114 VSKKIPCISFQAGDKV--------DVGAFSIESVRVNHSIPETMALV--IRSPVGNIVHT 163 + + GA ++ V H I + + ++ Sbjct: 105 FENSSLTKQHFELSVIGLDPGVPQNFGAATVTPYPVLHGDSGGPFFAYRIEAEGRTLAYS 164 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 GD + D + + + R +K + + Sbjct: 165 GDTQWTDTLVDAGH------------DADLFISECYTYDRPVKN--HLSLKTLETHLPEI 210 Query: 224 AKGCVLVTTFSSSVSRIRSIIDIAEQ 249 V++T S + R ++ Sbjct: 211 NPKRVVLTHMSDEMLRKLDSVNHTVA 236 >gi|282859632|ref|ZP_06268734.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] gi|282587550|gb|EFB92753.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] Length = 257 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 41/190 (21%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + ++IDCG PD + + + + + +TH H DH G + Sbjct: 44 IETENTRLLIDCG---------------PDFRQQILPQPFRKIDGVLLTHIHYDHVGGID 88 Query: 86 DLWSFL---HVPVYASPFAIGLLEAKR------VYERVSKKIPCISFQAGDKVDVGAFSI 136 DL +F + VYA+ L K+ S + K+ +G F + Sbjct: 89 DLRAFCALGDIDVYANKHTCEGLHHNIPYCFTDHLYPGVPKLNLHSVEPHQKLHIGDFEV 148 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 E V H ++ +G++ + D K + DK+ L +GI L+ Sbjct: 149 EPFEVIH----GKLPILGYRIGSLAYITDMKSIE--------DKELLS---LKGIKTLII 193 Query: 197 DSTNAMREGT 206 + R Sbjct: 194 NGLRWDRPHH 203 >gi|229028873|ref|ZP_04184974.1| Beta-lactamase domain protein [Bacillus cereus AH1271] gi|228732444|gb|EEL83325.1| Beta-lactamase domain protein [Bacillus cereus AH1271] Length = 244 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEQDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + VG Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQVGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDAVVYSADSSYIPEFIPF 165 >gi|257898710|ref|ZP_05678363.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|257836622|gb|EEV61696.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] Length = 208 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G I N L + ++ID P +D + K + +AI +T Sbjct: 9 GMIEENCYLV----YNEEALLIID-----PGEDAERIKQEI------KKTNQQPVAILLT 53 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH GA+ L ++ +PVY SP LE K + + + + V Sbjct: 54 HTHYDHIGAVEPLRAYYQIPVYVSP-----LEQKWLGDPILNLSGLGRHDDIADIIVSPA 108 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E +++ V+ +P +I + + DD Sbjct: 109 EYEFEMKTYTLGNMSFRVVPTPGHSIG-SVSFIFDD 143 >gi|229042931|ref|ZP_04190664.1| Beta-lactamase domain protein [Bacillus cereus AH676] gi|228726396|gb|EEL77620.1| Beta-lactamase domain protein [Bacillus cereus AH676] Length = 244 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I + + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|26339774|dbj|BAC33550.1| unnamed protein product [Mus musculus] Length = 541 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEASQQIVQLIRQFPQHNI 177 >gi|114565865|ref|YP_753019.1| RNA-metabolising metallo-beta-lactamase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336800|gb|ABI67648.1| RNA-metabolising metallo-beta-lactamase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 525 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 64/481 (13%), Positives = 138/481 (28%), Gaps = 92/481 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F LG + + L G +DCG+ L + F + Sbjct: 1 MKLKF--LGAAKTVTGSFFLVETGDFR----FAVDCGLFQGSKSLQQRNYQ----DFPVD 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE---------------- 106 + + +THAH DH G + L P+Y S L + Sbjct: 51 PAS-INFVILTHAHIDHSGLIPKLCKKGFTGPIYCSQITEQLCQVLLPDSGYIQESEVER 109 Query: 107 --AKRVYERVSKKIPCISFQA-------------GDKVDVGAFSIESVRVNHSIPETMAL 151 K + P + + + + + +R I + Sbjct: 110 KNRKLKRSGLKLLEPIYTAKDALNCLPQFRPLNTDEIIKINCHISIRLRTAGHILGATIV 169 Query: 152 VIRSPVG----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + +V +GD + ++ D + E L+ +ST R Sbjct: 170 EVWVEEDGKKSKLVFSGDLGNINQPLVK---DPSII-----ESADFLVIESTYGNRLHDY 221 Query: 208 ISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVV 265 ++ + + I + M G +++ F+ V R + +I +G + L + ++ + Sbjct: 222 SMDRAEQLLQVINETMAKG-GNLIIPAFA--VERTQDLIYDLIMLGYEKKLDPN-MQIYI 277 Query: 266 SVAIDVGIIKKDQLFLSDESF-------GLYPREQLIVIATGSQGEPR------------ 306 + + + P + + + T ++ E Sbjct: 278 DSPLAIAATEIFVKNRDSYEDTTRAFMTKGDPWQYINLNLTRTREESMQLNDSVSKSIII 337 Query: 307 --SALAQLSRGEMRNVK--LAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 S + + R + + T++F G I + + Sbjct: 338 SASGMCEAGRIKHHLKHNLWRPESTILFVGYQAAG--SLGRRILEGEQIVTIHGEKVAVK 395 Query: 363 CPVH----VSGHPYPNDLKRMY--QWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + S H + L ++P+ + +HGE +A E+ Q+ + Sbjct: 396 ADIRRIVAYSAHADKDGLIDWLMSFVVKPRDIFIVHGEEEAQLALAEVIQQKLNVPIFIP 455 Query: 417 R 417 Sbjct: 456 D 456 >gi|327395216|dbj|BAK12638.1| hypothetical protein PAJ_2558 [Pantoea ananatis AJ13355] Length = 389 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 38/234 (16%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + ++ D G P+ PGV PD+T ++ AI +TH+H DH GAL Sbjct: 45 FLLEIQGYRLLWDLGAG-PE---PGVR---PDLTV----TGHVDAICLTHSHGDHTGAL- 92 Query: 86 DLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 D W L PVYA+ L E + + VG ++ + R HS Sbjct: 93 DSWQALGSPPVYATELTWQQL-----GECPVPGRSRHALPLRGQCAVGPLNLFTGRSGHS 147 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 P ++ + G I + GDW + + D + L+ D++ R Sbjct: 148 -PGSVWFHLAVAGG-ITYMGDWSRESLLLPFDRPPRARW----------LITDASYGDR- 194 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + + + +++ A+ +VT R + G +VL Sbjct: 195 -----HQRLNQQVDALIQAARHGAVVTAPLH--GRGPEMALRLRAKGLPVVLCP 241 >gi|315453526|ref|YP_004073796.1| putative hydrolase [Helicobacter felis ATCC 49179] gi|315132578|emb|CBY83206.1| putative hydrolase [Helicobacter felis ATCC 49179] Length = 205 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 33/190 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ G N Y + + +ID G + ++++ Sbjct: 1 MQIKVKAFG-------NTQTNCYIASLEQGDFIIDPGFG--------------ALEWVLE 39 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYER----VSKKI 118 + +AI ITH H DH H L + L VP+YA I +L + + K I Sbjct: 40 NTQKPLAILITHGHYDHIWDAHALKNALPSVPLYAPSEDIFMLTSDCFSLGLTPCLEKDI 99 Query: 119 PCISFQ-AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILG 175 I+ ++G I P + + + +GD+ Sbjct: 100 HPIACHKDTFTFEIGNVPITYWHFPGHTPGCSMIELGG----VFFSGDFIFQRSIGRYDF 155 Query: 176 DVTDKDSLCA 185 ++ + Sbjct: 156 PYSNPADMKE 165 >gi|291618865|ref|YP_003521607.1| Hypothetical Protein PANA_3312 [Pantoea ananatis LMG 20103] gi|291153895|gb|ADD78479.1| Hypothetical Protein PANA_3312 [Pantoea ananatis LMG 20103] Length = 349 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 38/234 (16%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 + ++ D G P+ PGV PD+T ++ AI +TH+H DH GAL Sbjct: 5 FLLEIQGYRLLWDLGAG-PE---PGVR---PDLTV----TGHVDAICLTHSHGDHTGAL- 52 Query: 86 DLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 D W L PVYA+ L E + + VG ++ + R HS Sbjct: 53 DSWQALGSPPVYATELTWQQL-----GECPVPGRSRHALPLRGQCAVGPLNLFTGRSGHS 107 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 P ++ + G I + GDW + + D + L+ D++ R Sbjct: 108 -PGSVWFHLAVAGG-ITYMGDWSRESLLLPFDRPPRARW----------LITDASYGDR- 154 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + + + +++ A+ +VT R + G +VL Sbjct: 155 -----HQRLNQQVDALIQAARHGAVVTAPLH--GRGPEMALRLRAKGLPVVLCP 201 >gi|299537708|ref|ZP_07050997.1| hypothetical protein BFZC1_16879 [Lysinibacillus fusiformis ZC1] gi|298726687|gb|EFI67273.1| hypothetical protein BFZC1_16879 [Lysinibacillus fusiformis ZC1] Length = 213 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 24/152 (15%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ I+ D G ++ + + +AIF+THAH D Sbjct: 14 NCYIVS---NKEKECIVFDPG----EEAERLIKTI-------RSNGLKPLAIFLTHAHFD 59 Query: 80 HYGALHDLWSFLHVPVYASP--------FAIGLLEAK--RVYERVSKKIPCISFQAGDKV 129 H GA+ + VPV+ RV+ + ++ Sbjct: 60 HIGAVDAVREVFDVPVWIHEKEVSWLADPTKNGSSKYPALPDYRVAAPAQDTIIKKEQQI 119 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 ++ F ++V P +++ + + IV Sbjct: 120 EMSNFVFQAVFTPGHSPGSISYIFENDGFAIV 151 >gi|283954382|ref|ZP_06371903.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283794181|gb|EFC32929.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 198 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + + +ID PG+D + FI + KN +AI TH H DH Sbjct: 15 CYILFTEKGEFIID----------PGIDALL----FIKQHVKNPLAILNTHGHYDHIWDN 60 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + ++P+Y +L S + D +++ + + Sbjct: 61 AKVKKEYNIPIYIHKNDAFMLHDDFNKGYDSSDADFLVDNE-DILNICGVDFKFHFLPGH 119 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVT 178 P I NI+ +GD+ + D Sbjct: 120 TPGCTM--IEIIGKNIMFSGDFLFYRNIGRWDFP 151 >gi|229120712|ref|ZP_04249955.1| Beta-lactamase domain protein [Bacillus cereus 95/8201] gi|228662717|gb|EEL18314.1| Beta-lactamase domain protein [Bacillus cereus 95/8201] Length = 244 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITVGNDIVVYSADSSYIPEFIPF 165 >gi|153004903|ref|YP_001379228.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028476|gb|ABS26244.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 461 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 83/286 (29%), Gaps = 70/286 (24%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G + + L GS +++D G+ + +L + Sbjct: 4 IRF--LGAAGTVTGSRFLVESGSVR----VLVDAGLFQGQKEL-----------RLRNRA 46 Query: 66 ------KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------------- 105 ++ A+ +THAH DH GAL L + +P L Sbjct: 47 PWPVPPSSIDAVVLTHAHVDHTGALPLLVRDGFRGLAHCTPATRDLAGLLLPDSGRLQEE 106 Query: 106 EAKRVYERVSKKIPCISFQ-------------------AGDKVDVGAFSIESVRVNHSIP 146 EA+ R K + ++ + R H I Sbjct: 107 EARFANRRGYSKHAPHAAPLYSEADALAALPRLSPLPYDEERAIAPGVRVRFRRAGH-IL 165 Query: 147 ETMALVIRSPV---GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + + + ++ +GD IL D AL+ +ST A + Sbjct: 166 GSALVELALDGPRPLRLLFSGDLGRYGAPILPDP--------DPGSPADALVLESTYAGK 217 Query: 204 EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 S A G V++ F+ + R + ++ Sbjct: 218 AHPDASPAAALAEEIRRAVRAGGAVIIPAFA--IGRTQEVLFTLRA 261 >gi|288819083|ref|YP_003433431.1| beta-lactamase family protein [Hydrogenobacter thermophilus TK-6] gi|288788483|dbj|BAI70230.1| beta-lactamase family protein [Hydrogenobacter thermophilus TK-6] gi|308752666|gb|ADO46149.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6] Length = 210 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 29/164 (17%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 L +P+G + +N ++ K ++ID G D I + Sbjct: 3 LKVIPVGILS---VNCSVI--LDEEEGKAVVIDPG---------------ADAERIEEAM 42 Query: 66 K--NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-------KRVYERVSK 116 L AI TH H DH G + L VP Y + L+ K++ + Sbjct: 43 DGFELQAIICTHGHIDHVGQVKTLKEKYRVPFYMHRSDLFLINDPIWPGFEKQIGCALPC 102 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 P + G ++ VG+ S+E + P L ++ I Sbjct: 103 PEPDEFLEDGSEIKVGSISLEVLYTPGHTPGLCCLYMKDHGVLI 146 >gi|315426584|dbj|BAJ48213.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 218 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + Y +R+ ++ID G D ++ + + R + A++ TH H D Sbjct: 14 SSNSYIVYDEETREAVIIDAG----DDAWLLLET-------LQERRLRVNAVYATHGHFD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL-------EAKRVYERVSKKIPCISFQAGDKVDVG 132 H A+ DL L +P Y + +L + P + G + VG Sbjct: 63 HVMAVDDLKQALKIPFYIHRLDLEILSMAREMTRRFLGIDVGDPPSPDGFLEDGQTIQVG 122 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 S++ + P ++ ++ +GD Sbjct: 123 GKSLKVIHTPGHSPGSVCFY----GDGVLFSGDLLF 154 >gi|257463298|ref|ZP_05627696.1| metallo-beta-lactamase family protein [Fusobacterium sp. D12] gi|317060878|ref|ZP_07925363.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313686554|gb|EFS23389.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 206 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ I+ID G S P+ ++ +F + + AI +THAH D Sbjct: 15 NCYVL----IQEKQSIIIDPGFS-PEK----IESMFEGTSPL--------AILLTHAHLD 57 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRV--YERVSKKIPCISFQAGDKVDVGAFSIE 137 H A+ L +P+Y S +L+ ++ +G F E Sbjct: 58 HVNAVKALHQKYQLPIYMSKKDDAILKLTTSAPEGYHRDFEAEYFDLQEGRLQIGNFCFE 117 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 + ++ + N + TGD ++ + + Sbjct: 118 IIATPGHTEGSLCI----RYENHLFTGDTLFRGTIGRTDIFSSNPEKMQK 163 >gi|251780861|ref|ZP_04823781.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085176|gb|EES51066.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 237 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 16/155 (10%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + + ++++ G++F + + ++ ITH H+DH + Sbjct: 13 SYIIQAREEILLLELGINFKNIK-----------KALNYDLSKVVGALITHEHKDHCKCV 61 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 D+ + +Y S ++ K E + ++ + + +G F I H Sbjct: 62 DDVIKA-GIDIYMSKGTSEGIKYKVSEEAIKNRVHY--LKHAESYKIGGFLIVPFNAQHD 118 Query: 145 IPETMALVIRSP--VGNIVHTGDWKLDDDAILGDV 177 + E + +I + T + L + D Sbjct: 119 VNEPLGFLIYHKYIGKIVFATDTYYLKNTFRDIDH 153 >gi|329576550|gb|EGG58057.1| hypothetical protein HMPREF9520_01465 [Enterococcus faecalis TX1467] Length = 65 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 23/59 (38%) Query: 501 HKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKISRQR 559 K V V + + L++ I L L + ++P++ I + ++++ Sbjct: 1 MKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYLFEQTKRRPVILPVIMEATQRK 59 >gi|226951881|ref|ZP_03822345.1| beta-lactamase domain-containing protein [Acinetobacter sp. ATCC 27244] gi|294649138|ref|ZP_06726580.1| metallo-beta-lactamase [Acinetobacter haemolyticus ATCC 19194] gi|226837421|gb|EEH69804.1| beta-lactamase domain-containing protein [Acinetobacter sp. ATCC 27244] gi|292825021|gb|EFF83782.1| metallo-beta-lactamase [Acinetobacter haemolyticus ATCC 19194] Length = 214 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ +++ I+ID G + ++ + A+++TH H D Sbjct: 15 NCSIL--WDSETKEAILIDAG---GDAAVLKKEV--------EDLGLKVKALWLTHGHLD 61 Query: 80 HYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVG 132 H GA+ +L +PV F + +++ P Q G+ + +G Sbjct: 62 HAGAVGELAEAWKIPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVNQWLEGGEVLKLG 121 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 E P + + ++ TGD TD Sbjct: 122 EDEFEVRFAPGHTPGHVMFY--NKKHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|237750615|ref|ZP_04581095.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229373705|gb|EEO24096.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 201 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 21/146 (14%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y ++D G + +++K KNL AI ITH H DH Sbjct: 16 YILQFDDFEFVVDPGFN--------------ATEWVLKNTKNLQAILITHGHFDHIWDTA 61 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSK---KIPCISFQAGDKVDVGAFSIESVRVN 142 L VY +LE+ ++ + + + +++ ++ Sbjct: 62 KLQEQTKAKVYCPIQDSFMLESDCFNLGLTPCKADVYIENDKDSKSLNINGINVTYWHFP 121 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKL 168 P + + + +GD+ Sbjct: 122 GHTPGCSIIEV----CGHIFSGDFIF 143 >gi|73981038|ref|XP_848274.1| PREDICTED: similar to DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Canis familiaris] Length = 530 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP L+ + + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLVHRQLQVSKRWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGRETMTVTLMDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALKLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 I L D+TN S + + I ++++ + Sbjct: 138 -QIHTLYLDNTNCNPARVLPSRQEAARQIVELIRKHPQHNI 177 >gi|34541698|ref|NP_906177.1| metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis W83] gi|188994033|ref|YP_001928285.1| probable metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis ATCC 33277] gi|34398016|gb|AAQ67076.1| metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis W83] gi|188593713|dbj|BAG32688.1| probable metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis ATCC 33277] Length = 269 Score = 60.9 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 12/158 (7%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N Y + + ++ID G+ D P N++ + +TH H Sbjct: 13 GNC----YYLSNGNQALLIDAGIPLRSISKALKDHQLP-------IEGNVVGVLVTHDHA 61 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 DH + L H+PV+A+ + + R + + Q + + F I + Sbjct: 62 DHIRTIGCLGEKFHLPVFATERVHNGINSSRYMDHLPLLSRRNILQE-ETFRLAGFDITA 120 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + H E + I +P + D D I Sbjct: 121 FPIPHDATENVGYHITAPGFSFTLCTDVGHITDTISHY 158 >gi|229056818|ref|ZP_04196218.1| Beta-lactamase domain protein [Bacillus cereus AH603] gi|228720513|gb|EEL72080.1| Beta-lactamase domain protein [Bacillus cereus AH603] Length = 244 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y+ F E + I++ + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYSHSFD----ENGFNSLTHAPHTKGIAYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGDDVVVYSADSSYIPEFIPF 165 >gi|159906130|ref|YP_001549792.1| ribonuclease Z [Methanococcus maripaludis C6] gi|254808648|sp|A9AB37|RNZ_METM6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|159887623|gb|ABX02560.1| ribonuclease Z [Methanococcus maripaludis C6] Length = 308 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 23/134 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + DCG ++ + +F D++ + + IFI+H H DH L Sbjct: 21 SISLKFDGEIFLFDCG----ENTQRQI--IFTDVSPM-----KINNIFISHLHGDHILGL 69 Query: 85 HDLWSFL-------HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ-----AGDKVDVG 132 L + + +Y +LE S P ++ + Sbjct: 70 PGLLQSVAFQGRTKPLNIYGPEETAKMLENILNVGYHSIDYPINVYEISSKTPEKIISTD 129 Query: 133 AFSIESVRVNHSIP 146 + + S V HS+P Sbjct: 130 NYEVYSFPVVHSVP 143 >gi|296268926|ref|YP_003651558.1| beta-lactamase domain-containing protein [Thermobispora bispora DSM 43833] gi|296091713|gb|ADG87665.1| beta-lactamase domain protein [Thermobispora bispora DSM 43833] Length = 251 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 69/220 (31%), Gaps = 37/220 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY + +M+D G + G + +L A+ +TH H DH L Sbjct: 21 GYLVEAEGFRLMMDFG-----NGALGA---LQRFLGLY----DLDAVLLTHLHADHCLDL 68 Query: 85 --HDLWSFL--------HVPVYASPFAIGLLEAK--RVYERVSKKIPCISFQAGDKVDVG 132 + + VPVY L A +E V + +G Sbjct: 69 CAYHVVRTYTPDGPLPGKVPVYGPRDTAQRLNAAYGMPHEPVLENSFEFIPVTTGVRRIG 128 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F + + +NH + ET I ++V++GD + + L Sbjct: 129 PFEVTAAPMNHPV-ETYGYRITYGGRSVVYSGDTG--------ESAELVELARDA----D 175 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 L+C+++ G + + A LV T Sbjct: 176 LLLCEASFLDAPGQPPGLHLNGRQAAEHAARAGVGTLVLT 215 >gi|293610180|ref|ZP_06692481.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827412|gb|EFF85776.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 214 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P +V + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPG--HVVFYNKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|114654445|ref|XP_001147204.1| PREDICTED: cleavage and polyadenylation specific factor 2 isoform 2 [Pan troglodytes] Length = 731 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|330877033|gb|EGH11182.1| hypothetical protein PSYMP_16301 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 480 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 84/265 (31%), Gaps = 47/265 (17%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + + SS ++IDCG S + G ++T + + + A+ Sbjct: 10 GAVDTVTGSCHQLRMDASSS---LLIDCG-SVQERGASG------EVTPFGFDPEAIRAL 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQ 124 +TH H DH G + +L + P+ S + LL K + ++ Sbjct: 60 LVTHVHNDHVGRIPELLASGYEGPILCSEPSAHLLPLVMEDSLKIQFAHDPEQAERYLAL 119 Query: 125 AGDKVDVGAF--------------SIESVRVNH-----SIPETMALVIRSPVGNIVHTGD 165 ++ F + R H I + + +V +GD Sbjct: 120 INKRIIALPFDNWFSLVDRESLHCRVRLQRAGHILGSAYIECDLHYPLEGRSIRVVFSGD 179 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNA 224 L E L+ +ST R S + + I D Sbjct: 180 LGASHTPFLP--------APKPPEHADILVLESTYGDRLHEDRSIRQQELERIIDRALED 231 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 232 NGTVLIPAFS--IGRTQELLYELED 254 >gi|311705723|gb|ADQ01127.1| artemis [Callicebus cupreus] Length = 692 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 103/341 (30%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELLLTSPKYRFWEKRIMSIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQIPLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T R I + + + I++ + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDRRFYQIPSRE--ECLSGILELV--GSWI 194 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 T V ++ G + + S + V V V + + Sbjct: 195 TQSPYHVV----WLNCKAAYGYEYLFTNLSEEFGVQV--HVDKLDMFRNMPDILRHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I E +L G ++ I S G ++ Sbjct: 249 RNTQIHACRHPNAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPN 340 >gi|89900770|ref|YP_523241.1| beta-lactamase-like protein [Rhodoferax ferrireducens T118] gi|89345507|gb|ABD69710.1| beta-lactamase-like [Rhodoferax ferrireducens T118] Length = 295 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 52/222 (23%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVS-FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 G N + + I++D G FP +L + +FI+H+ Sbjct: 23 GGNTTCIEI-RTDNNELIILDAGTGIFPLSQTLLAEL------PVTAN------VFISHS 69 Query: 77 HEDHYGALHDLWSFLHVPVYASPFAIGL------LEAK----------------RVYERV 114 H DH L +P + + L + K + Sbjct: 70 HWDHIQGLPFFIPNF-IP--GN--TLRLHGAFDPVSGKGVEQVMAVQLQYSYFPVREAEM 124 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL------ 168 ++ ++ + + +G+ ++ +NH + + I + ++ TGD + Sbjct: 125 KARMEYVTLKPEQSLQIGSATVTPFLMNHPVID-FGYRIEANGKSVFFTGDHEPPLNIYE 183 Query: 169 --DDDAILGDVTDKDSLCAI--GNEGILALMCDSTNAMREGT 206 D+ + +I G+ L+ DS+ E Sbjct: 184 PGDESYDEYQGFIDEKAHSILRAMHGVDVLIADSSYTEAEYP 225 >gi|323485945|ref|ZP_08091278.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14163] gi|323693058|ref|ZP_08107278.1| beta-lactamase domain-containing protein [Clostridium symbiosum WAL-14673] gi|323400735|gb|EGA93100.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14163] gi|323502939|gb|EGB18781.1| beta-lactamase domain-containing protein [Clostridium symbiosum WAL-14673] Length = 214 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 24/158 (15%) Query: 17 IGM---NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GM N + +P +++ +++D P D+ P + I K ++ AI + Sbjct: 8 VGMVETNCYIA--LNPQNKEAVIVD-----PGDNAPKI------IETCGKLGASVKAILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA---KRVYERVSKKIPCISF---QAGD 127 TH H DH A+ +L PV+AS G+L + +S + + + + Sbjct: 55 THGHFDHVMAMEELRLKYKAPVFASEQEAGVLADPDKNLSCQFMSGGLYLKADRLLKDQE 114 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ + + + + I S ++ GD Sbjct: 115 EFELIGYQFKVIHTPGHTCGSCCYYIASE--KVLFAGD 150 >gi|196036485|ref|ZP_03103881.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228944814|ref|ZP_04107177.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195990959|gb|EDX54931.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228814842|gb|EEM61100.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 244 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLIMSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|237653830|ref|YP_002890144.1| RNA procession exonuclease-like protein [Thauera sp. MZ1T] gi|237625077|gb|ACR01767.1| exonuclease of the beta-lactamase fold involved in RNA processing-like protein [Thauera sp. MZ1T] Length = 140 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 13/111 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDL--VFPDITFI 61 E+ F+ G +G++ + A + ++DCG+ + D P + ++P Sbjct: 1 MEIQFV--GPLGKVTGSCAWLR--DEGRKWSFLVDCGMQQGEYDAPRWNRGELWPF---- 52 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 + ++ + +THAH DH G L +L+ V+ + + E Sbjct: 53 --KPSDIQFVILTHAHIDHSGLLPELYRQGFKGQVFCTRATRKIAEVLLRD 101 >gi|221067326|ref|ZP_03543431.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] gi|220712349|gb|EED67717.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] Length = 466 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 68/491 (13%), Positives = 129/491 (26%), Gaps = 97/491 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G + + L + +IDCG++ + + Sbjct: 1 MNITFHGAAQSVTGSCFLV----QAHDCRFLIDCGMAQGGREADEHNQQAFAFD-----P 51 Query: 66 KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE-----------------A 107 +L + +THAH DH G L L + +YA+ LLE A Sbjct: 52 ASLDFVVLTHAHIDHSGLLPKLVARGFKGDIYATLATRDLLEVLLKDSAHIQMMDADRAA 111 Query: 108 KRVYERVSKKIPCIS-----------------FQAGDKVDVGAFSIESVRVNHSIPETMA 150 +R E K+ + G + + + + I + Sbjct: 112 RRQREGKRKEREPVVALYSLAHVASTLEQVQARAYGQRFEPYPSVVVRFQDAGHILGSAI 171 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVT--DKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + + G D G V D + L+ +ST R Sbjct: 172 VELWLADGQGGTRKLVASGDLGQPGRVILRDPTPIKE-----ADLLLIESTYGDRLHKST 226 Query: 209 SEKGIKKNIYDIMKNAK-GCVLVTTFSSSVSRIRSI---------------IDIAEQIGR 252 + +++ + + + A G V++ F+ V R + + I+I Sbjct: 227 GD-TLEELVDVVTRTAPHGNVVIPAFA--VGRTQELLYHFLQLIQQRRLPPIEIFVDSPM 283 Query: 253 KIVLLG-------------SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 + L V + I + D R ++I+ Sbjct: 284 AVAATDITLRHFSVFDEEARQLLGSVKRLKESPHIH-FISDVEDSIKLNRIRSGAVIISA 342 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAE 359 + L L R + V+ G + + + + Sbjct: 343 SGMCDAGRVLHHLKNNLSR-----PECAVVICGFQAEG--SLGRRLVDGARQVRLLGDEV 395 Query: 360 DAECPVHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIACV 413 + +H S H L PQ +HGEP A L + V Sbjct: 396 EVRAGIHTLGGFSAHADQQALLDWAAGFERPPQQTFVVHGEPHAARALATLLHERLHFSV 455 Query: 414 PPVRNGKMLRL 424 + ++ Sbjct: 456 QVPQPAQVFEC 466 >gi|189462109|ref|ZP_03010894.1| hypothetical protein BACCOP_02789 [Bacteroides coprocola DSM 17136] gi|189431190|gb|EDV00175.1| hypothetical protein BACCOP_02789 [Bacteroides coprocola DSM 17136] Length = 212 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 23/185 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + + +ID G FP++ +I + + + TH H D Sbjct: 14 NCYVIS---DETGEAAIIDAGCFFPEEQQMLK-------QYIADNKLTVKHLLNTHLHLD 63 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYE--------RVSKKIPCISFQAGDKVDV 131 H + + A LL AK + + + G+ + Sbjct: 64 HVFGNPFILREFGLKAEACQLDEFLL-AKLPDQCRMFGFSPNEAPVGLGHYIEDGEIIRF 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 G ++++ V P M + +GD + D + L + Sbjct: 123 GHTELQAIHVPGHSPGGMVYY--CKADACLFSGDVLFQGSIGRADLEGGDFNELIEQISC 180 Query: 190 GILAL 194 +L L Sbjct: 181 RLLTL 185 >gi|149198624|ref|ZP_01875668.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] gi|149138339|gb|EDM26748.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] Length = 213 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 21/197 (10%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ Y S + I+ID G + + I + + + AI THAH D Sbjct: 16 NCSIV-YCPESK-EAILIDPGS--------EAETILKKINY---QGLKIKAIIHTHAHLD 62 Query: 80 HYGALHDLWSFLHVPVYASPFAIGL--LEAKRVYERVSKKIPC----ISFQAGDKVDVGA 133 H+GA H++ V+ + L + + K P + + G Sbjct: 63 HFGATHEVSESTDASVHLHKDDMPLWNIADLQAEMLGLPKCPHANVDHFIEDSQSFEFGE 122 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGI 191 F +E++ + I + ++ +GD ++ D + E + Sbjct: 123 FKLEAIHTPGHSAGSTCFKIENSDEQLLFSGDTLFRRGVGRTDLPSGDSREIAKSIKEKL 182 Query: 192 LALMCDSTNAMREGTCI 208 L D+T G Sbjct: 183 YKLDIDTTVIPGHGPNT 199 >gi|153955743|ref|YP_001396508.1| hypothetical protein CKL_3129 [Clostridium kluyveri DSM 555] gi|219856112|ref|YP_002473234.1| hypothetical protein CKR_2769 [Clostridium kluyveri NBRC 12016] gi|146348601|gb|EDK35137.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219569836|dbj|BAH07820.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 199 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 20/197 (10%) Query: 19 MNMALYGYGSPSSRKWIMID-----CGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 ++ + YG+ +I+ID C V P D P + I + + + I + Sbjct: 4 KSLVVGSYGTNC---YILIDEGSLQCAVIDPGGDAPQI------IKAVEDSKCKVKYILL 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ +L + + PV S +++ + + ++G Sbjct: 55 THGHIDHTGAVVELKNKYNAPVAISEKDYKMVQQGAFVYGNIGNEAPLYIKDNQIFEIGD 114 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGI 191 ++++ P ++ + +V +GD D +++ I Sbjct: 115 IKLKAIYTPGHTPGGVSFLTDK----VVFSGDTLFQGSIGRTDFPGGDFETIIDSIKTKI 170 Query: 192 LALMCDSTNAMREGTCI 208 + L ++ G Sbjct: 171 IVLPNETVVLSGHGPKT 187 >gi|158523037|ref|YP_001530907.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511863|gb|ABW68830.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 268 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 13/142 (9%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 I++D G+S GV+ + + I ++L AI I+H H DH L Sbjct: 35 DTAILVDAGLS-------GVE-IERRLATIGVNPRSLDAIVISHEHTDHVRGAGILCRRH 86 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 +P+Y + +A + G + +I ++H + Sbjct: 87 KLPLYITAPTH---KAALAQLGGIDDCRYFAC--GQSFSINTLTIHPFSLSHDARDPSGF 141 Query: 152 VIRSPVGNIVHTGDWKLDDDAI 173 +S D + + Sbjct: 142 TFQSGGAKAGLATDLGVATTMV 163 >gi|329928605|ref|ZP_08282472.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|328937721|gb|EGG34130.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 212 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 19/79 (24%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN--LMAIFITHAH 77 N L P K I+ID G+ + ++K + + AI +THAH Sbjct: 16 NAYLL--TGPVEGKAIIIDPGM---------------NPGPLVKRIADLEIEAILLTHAH 58 Query: 78 EDHYGALHDLWSFLHVPVY 96 DH G + ++ PVY Sbjct: 59 FDHMGGVEEIRKLKDCPVY 77 >gi|315030189|gb|EFT42121.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4000] Length = 220 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + K AI +TH H D Sbjct: 27 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKKPAAILLTHTHYD 71 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 72 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 126 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 127 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 156 >gi|73962297|ref|XP_856455.1| PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 4 [Canis familiaris] Length = 731 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|284161362|ref|YP_003399985.1| beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011359|gb|ADB57312.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631] Length = 253 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 35/178 (19%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHY 81 + + K ++ID PD+ + + A+ TH H DH+ Sbjct: 37 FSVMIQNEGKILLID---------------TSPDMRRQLLDTNVDRVDAVIWTHCHFDHF 81 Query: 82 GALHDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF-----S 135 G + + V VY +P ++++ + K + + ++ + F Sbjct: 82 GGFGNFYRVQSDVKVYTTP---------KIHDDIGKFMSFMEYKPIEVECYEPFELIGLK 132 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD---DDAILGDVTDKDSLCAIGNEG 190 I VNH + + + I IV +GD D + D + A+ G Sbjct: 133 ITLFEVNHPPVDAIGVKIEWNGYKIVVSGDTNADIPKRSLEEMEEPDLFIVEALAPRG 190 >gi|257458364|ref|ZP_05623511.1| ribonuclease [Treponema vincentii ATCC 35580] gi|257444238|gb|EEV19334.1| ribonuclease [Treponema vincentii ATCC 35580] Length = 468 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 82/284 (28%), Gaps = 66/284 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV---SFPKDDLPGVDLVFPDITFIM 62 + LG E+ + + + DCG + D D P Sbjct: 3 INVYSLGAAEEVTGS----KHILDVDGYLYLFDCGAFQGKRAEADKKNRDFDVP------ 52 Query: 63 KERKNLMAIFITHAHEDHYGALHDL-WSFLHVPVYASPFAIGLL---------------- 105 L A+ +TH H DH G L L +YA+P + + Sbjct: 53 --ADKLTAVVLTHGHYDHCGLLPLLGIHGFTGNIYATPASRDIANLVLMDSARIQARDAE 110 Query: 106 ----EAKRVYERVSKKIPCISFQAGDKVD------------VGA-FSIESVRVNHSIPET 148 +A + +E+ K ++ +G +E H I + Sbjct: 111 YLQKQALKKHEKFDWKPLFTEEDVVQTINQFVTVSYHRPVWIGPNVQLEFYDAGH-ILGS 169 Query: 149 MALVIRSPVG-----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 I + I TGD + + D +M +ST R Sbjct: 170 AIAFITAKDSTGKTVKIAFTGDLGR-KNKSIIRDPDI-------IPSADYIMIESTYGNR 221 Query: 204 EGTCISEK-GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDI 246 I + ++ + +G +++ F+ V R + +I Sbjct: 222 RHEDIHNAMDMLEHAVNDAVKMRGKIIIPAFA--VERTQELIYY 263 >gi|227553963|ref|ZP_03984010.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis HH22] gi|293387328|ref|ZP_06631884.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|307271538|ref|ZP_07552810.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|312899862|ref|ZP_07759180.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|312905154|ref|ZP_07764275.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|312953512|ref|ZP_07772351.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|227176949|gb|EEI57921.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis HH22] gi|291083226|gb|EFE20189.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|306511810|gb|EFM80808.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|310628573|gb|EFQ11856.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|310631544|gb|EFQ14827.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|311292858|gb|EFQ71414.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|315146707|gb|EFT90723.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4244] gi|315152003|gb|EFT96019.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0031] gi|315155365|gb|EFT99381.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0043] gi|315580189|gb|EFU92380.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309A] gi|327535716|gb|AEA94550.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis OG1RF] Length = 220 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + K AI +TH H D Sbjct: 27 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKKPAAILLTHTHYD 71 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 72 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 126 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 127 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 156 >gi|261409308|ref|YP_003245549.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261285771|gb|ACX67742.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 212 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 19/79 (24%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN--LMAIFITHAH 77 N L P K I+ID G+ + ++K + + AI +THAH Sbjct: 16 NAYLL--TGPVEGKAIIIDPGM---------------NPGPLVKRIADLEIEAILLTHAH 58 Query: 78 EDHYGALHDLWSFLHVPVY 96 DH G + ++ PVY Sbjct: 59 FDHMGGVEEIRKLKDCPVY 77 >gi|73962295|ref|XP_856414.1| PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 3 [Canis familiaris] Length = 741 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|29376926|ref|NP_816080.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227519851|ref|ZP_03949900.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis TX0104] gi|229545148|ref|ZP_04433873.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis TX1322] gi|229549397|ref|ZP_04438122.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis ATCC 29200] gi|255972101|ref|ZP_05422687.1| metallo-beta-lactamase [Enterococcus faecalis T1] gi|255975168|ref|ZP_05425754.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256617012|ref|ZP_05473858.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 4200] gi|256853792|ref|ZP_05559157.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256956709|ref|ZP_05560880.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256961274|ref|ZP_05565445.1| metallo-beta-lactamase [Enterococcus faecalis Merz96] gi|256963598|ref|ZP_05567769.1| metallo-beta-lactamase [Enterococcus faecalis HIP11704] gi|257081990|ref|ZP_05576351.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|257084542|ref|ZP_05578903.1| metallo-beta-lactamase [Enterococcus faecalis Fly1] gi|257087462|ref|ZP_05581823.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257090621|ref|ZP_05584982.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257416669|ref|ZP_05593663.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257419885|ref|ZP_05596879.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257421927|ref|ZP_05598917.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|293383559|ref|ZP_06629469.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|300861340|ref|ZP_07107427.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|307277134|ref|ZP_07558238.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|307285786|ref|ZP_07565920.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|307287689|ref|ZP_07567732.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|307290515|ref|ZP_07570428.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|312906109|ref|ZP_07765121.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|312909455|ref|ZP_07768310.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|29344391|gb|AAO82150.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227072645|gb|EEI10608.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis TX0104] gi|229305634|gb|EEN71630.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis ATCC 29200] gi|229309693|gb|EEN75680.1| hydroxyacylglutathione hydrolase [Enterococcus faecalis TX1322] gi|255963119|gb|EET95595.1| metallo-beta-lactamase [Enterococcus faecalis T1] gi|255968040|gb|EET98662.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256596539|gb|EEU15715.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 4200] gi|256710735|gb|EEU25778.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256947205|gb|EEU63837.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256951770|gb|EEU68402.1| metallo-beta-lactamase [Enterococcus faecalis Merz96] gi|256954094|gb|EEU70726.1| metallo-beta-lactamase [Enterococcus faecalis HIP11704] gi|256990020|gb|EEU77322.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|256992572|gb|EEU79874.1| metallo-beta-lactamase [Enterococcus faecalis Fly1] gi|256995492|gb|EEU82794.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256999433|gb|EEU85953.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257158497|gb|EEU88457.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257161713|gb|EEU91673.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257163751|gb|EEU93711.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|291079071|gb|EFE16435.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|295113480|emb|CBL32117.1| Zn-dependent hydrolases, including glyoxylases [Enterococcus sp. 7L76] gi|300850379|gb|EFK78129.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|306498462|gb|EFM67966.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|306501427|gb|EFM70730.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|306502547|gb|EFM71814.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|306506064|gb|EFM75230.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|310627755|gb|EFQ11038.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|311290128|gb|EFQ68684.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|315025381|gb|EFT37313.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2137] gi|315035591|gb|EFT47523.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0027] gi|315150130|gb|EFT94146.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0012] gi|315159059|gb|EFU03076.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0312] gi|315161652|gb|EFU05669.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0645] gi|315164858|gb|EFU08875.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1302] gi|315170270|gb|EFU14287.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1342] gi|315574336|gb|EFU86527.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309B] gi|315579079|gb|EFU91270.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0630] Length = 208 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + K AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKKPAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|315647117|ref|ZP_07900230.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315277319|gb|EFU40648.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 244 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 70/249 (28%), Gaps = 51/249 (20%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N A GY + +++DCG + + L A+FITH H Sbjct: 15 KNEATSGYLLRHADSAVLLDCGSGVLSRLQNEI------------NLEQLDAVFITHTHA 62 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERV-----------------SKKIPCI 121 DH+ VYA F+ +L R + Sbjct: 63 DHF-----------ADVYALEFSALVLTQLGKRTRPLDVYIYGENLASLNFAYPDYVHVH 111 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V+VG H +P N++++GD + Sbjct: 112 PIEPARTVNVGELMFSFSETVHEVPCCAIKATTREGANLIYSGDTG--------YCSSFI 163 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + L ++ S +++G + G +++T F + + Sbjct: 164 EFAENAD---LLVLECSLYDVQKGVLDGHLTAGEAGEIARLANAGYLILTHFPHYGDQRQ 220 Query: 242 SIIDIAEQI 250 ++ A Sbjct: 221 LAMEAARNY 229 >gi|296452444|ref|ZP_06894145.1| metallo-beta-lactamase [Clostridium difficile NAP08] gi|296877793|ref|ZP_06901819.1| metallo-beta-lactamase [Clostridium difficile NAP07] gi|296258774|gb|EFH05668.1| metallo-beta-lactamase [Clostridium difficile NAP08] gi|296431244|gb|EFH17065.1| metallo-beta-lactamase [Clostridium difficile NAP07] Length = 204 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 23/154 (14%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G+N + G ++K +ID G S + ++F+ + N+ I +TH H Sbjct: 12 GVNTYVL--GDEKTKKCAVIDPGGSLVET-----------LSFVKENELNIEYIILTHGH 58 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDV 131 DH G + D+ V A LL K + I DK+++ Sbjct: 59 GDHIGYVKDIKEKTGAKVVAHIDEKELLNDKNKNLSYTMRCGAQEFDADIYVNDKDKLEL 118 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G + + M + + + TGD Sbjct: 119 GELKMTFLHTPGHTQGCMCIRVEDE----MFTGD 148 >gi|315166374|gb|EFU10391.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1341] Length = 208 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G ++ +IT + K AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPG---AEEAKL-----IQEITRLGKN---PAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|323307973|gb|EGA61229.1| Ysh1p [Saccharomyces cerevisiae FostersO] Length = 727 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 62/242 (25%), Gaps = 42/242 (17%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHV 93 M+D G+ L P + + + I+H H DH +L + Sbjct: 1 MLDAGIHPAYQGL----ASLPFYD--EFDLSKVDILLISHFHLDHAASLPYVMQRTNFQG 54 Query: 94 PVYASPFAIGLLEAKRV-------------------------YERVSKKIPCISFQAGDK 128 V+ + + + V + Sbjct: 55 RVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHST 114 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 VDV + H + I ++ TGD+ + D L + Sbjct: 115 VDVNGIKFTAFHAGH-VLGAAMFQIEIAGLRVLFTGDYSREVDRHLNS-------AEVPP 166 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ +ST + +K I V ++ R + I+ I + Sbjct: 167 LSSNVLIVESTFGTATHEPRLNRE-RKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILD 225 Query: 249 QI 250 + Sbjct: 226 EY 227 >gi|323303815|gb|EGA57598.1| Ysh1p [Saccharomyces cerevisiae FostersB] Length = 727 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 62/242 (25%), Gaps = 42/242 (17%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHV 93 M+D G+ L P + + + I+H H DH +L + Sbjct: 1 MLDAGIHPAYQGL----ASLPFYD--EFDLSKVDILLISHFHLDHAASLPYVMQRTNFQG 54 Query: 94 PVYASPFAIGLLEAKRV-------------------------YERVSKKIPCISFQAGDK 128 V+ + + + V + Sbjct: 55 RVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHST 114 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 VDV + H + I ++ TGD+ + D L + Sbjct: 115 VDVNGIKFTAFHAGH-VLGAAMFQIEIAGLRVLFTGDYSREVDRHLNS-------AEVPP 166 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ +ST + +K I V ++ R + I+ I + Sbjct: 167 LSSNVLIVESTFGTATHEPRLNRE-RKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILD 225 Query: 249 QI 250 + Sbjct: 226 EY 227 >gi|311896226|dbj|BAJ28634.1| hypothetical protein KSE_28230 [Kitasatospora setae KM-6054] Length = 250 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 36/190 (18%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y +++D G + G T + + + AI ++H H DH L Sbjct: 21 SYLVEHDGYRLVVDLG-----NGALGA---LQKYTGLYE----VDAILLSHLHADHCVDL 68 Query: 85 --HDLWSFLHV-------PVYASPFAIG-LLEA--KRVYERVSKKIPCISFQAGDKVDVG 132 + + V PV+ L A +++ G ++ +G Sbjct: 69 CAYWVARNYRVEGCPAPLPVHGPAGTAERLARAYDMPEKPGMTEVFDFRDLSDGARLALG 128 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 F++ + RVNH E I + ++V++GD + D L G Sbjct: 129 PFTVTAARVNHLDCEAYGFRIEAGGRSLVYSGDTGV--------CPDLVELAR----GTD 176 Query: 193 ALMCDSTNAM 202 +C++ Sbjct: 177 LFLCEAAYTD 186 >gi|261191614|ref|XP_002622215.1| endoribonuclease ysh1 [Ajellomyces dermatitidis SLH14081] gi|239589981|gb|EEQ72624.1| endoribonuclease ysh1 [Ajellomyces dermatitidis SLH14081] Length = 894 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 92/285 (32%), Gaps = 62/285 (21%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVS-----------FPKDDLPGV 51 ++EL+F LGG E+G + + Y K +M+D G+ F DL V Sbjct: 22 SDELLFYNLGGGNEVGRSCHIIQY----KGKTVMLDAGMHPAKEGFAALPFFDDFDLSTV 77 Query: 52 DLVFPDITFIMKERKNLMAIFITHAH---EDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 D++ I+ ++ +FI H D GA W V+ + + + Sbjct: 78 DILL--ISQYVE-------LFILFYHVLNFD-LGADILDWRD-KRRVFMTHATKAIYKWL 126 Query: 109 RV--------------------YERVSKKIPCIS-FQAGDKVDVGAFSIESVRVNHSIPE 147 + + I + + I H + Sbjct: 127 IQDNVRVSNTSSSSDQRTTLYTEQDHLSTLSQIEAIDFNTTHTINSIRITPFPAGH-VLG 185 Query: 148 TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG--ILALMCDSTNAMREG 205 +I NI+ TGD+ ++ D+ + A +G I L+ +ST + Sbjct: 186 AAMFLISIAGLNILFTGDYSREE--------DRHLISAEAPKGIKIDVLITESTFGVSSN 237 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 E+ + I V ++ R + ++ I ++ Sbjct: 238 PPRLERE-AALMKSITGVLNRGGRVLMPVFALGRAQELLLILDEY 281 >gi|229030785|ref|ZP_04186811.1| Metallo-beta-lactamase [Bacillus cereus AH1271] gi|228730547|gb|EEL81501.1| Metallo-beta-lactamase [Bacillus cereus AH1271] Length = 281 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 22/152 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER----KNLMAIFITHAHEDHYG 82 G+P + ++++D G+ +++ V + R AI +TH H DH G Sbjct: 41 GNPHTDDFVLVDAGMPKCANEIISV----------TENRFGTNSRPKAIILTHGHFDHVG 90 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSI 136 + +L + VPVYA I L ++ Y + + +D+G S+ Sbjct: 91 GIIELIKYWDVPVYAHAMEIPFLTGQQSYPEPDPSVEGGMVAKMSPLFPNEPIDLGN-SV 149 Query: 137 ESVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 +++ + ++P I +P H ++ Sbjct: 150 KALPTDGTVPHMPEFRWIHTPGHTPGHISLFR 181 >gi|113676970|ref|NP_001038566.1| protein artemis [Danio rerio] gi|71153323|sp|Q5RGE5|DCR1C_DANRE RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair 1C protein gi|56207770|emb|CAI20677.1| novel protein similar to human and mouse DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C) [Danio rerio] Length = 639 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 103/346 (29%), Gaps = 55/346 (15%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLH----VPVYASPFAIGLL----EAKRVYERVSK-- 116 A F++H H+DH L L L V +Y S LL + + Sbjct: 27 RAYFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKELLLSNPRYAFWEDHIVPLE 86 Query: 117 --KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 IS + + + H P ++ + G +++TGD++ Sbjct: 87 LDSPTSISLIDESTGETEDVVVTLLSAGH-CPGSVMFLFEGAKGTVLYTGDFR------- 138 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + D+ + K I+ D + + Sbjct: 139 ------------------LAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSRE 180 Query: 235 SSVSRIRSII-DIAEQIGRKIVLLG-SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 + ++ I+ ++ D Q +V L + + ++G Q+ ++ E Sbjct: 181 ACLAGIQQLVQDWICQSPYHVVWLNCKAAYGYEYLFTNLGQEFNSQIHVNSLDMFKKMPE 240 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK------ 346 L + T + + + + E + + + S A G + I IK Sbjct: 241 ILCHVTTNRATQIHAC--RHPKDE----EFFRANRLPCGSTAPDGIPLNIISIKPSTIWF 294 Query: 347 -NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 R + V V + S H ++K +I P + Sbjct: 295 GERTRKTSVVVKMGSSSYRACFSFHSSYLEVKDFLSYICPVNIYPN 340 >gi|329767222|ref|ZP_08258749.1| hypothetical protein HMPREF0428_00446 [Gemella haemolysans M341] gi|328836889|gb|EGF86536.1| hypothetical protein HMPREF0428_00446 [Gemella haemolysans M341] Length = 75 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 480 FGVPEIVDIGIPAYDGDGGKIHKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLK 539 P+I+ G + ++ V V+ + + +R+ I +L L+ Sbjct: 1 MNNPDIISRGF-VNVNESTELFGQSKAVVKDAVLSVLSNEECGVYQVRQQILESLGEFLE 59 Query: 540 KVWGKKPLVTVFINKI 555 G+KP++ I ++ Sbjct: 60 SEIGRKPVILPTILEV 75 >gi|313202614|ref|YP_004041271.1| hydrolase [Paludibacter propionicigenes WB4] gi|312441930|gb|ADQ78286.1| putative hydrolase [Paludibacter propionicigenes WB4] Length = 248 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 72/234 (30%), Gaps = 41/234 (17%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHDLWS 89 I+ID G PD+ + + L + ITH H DH G + DL Sbjct: 44 ESQILIDAG---------------PDLRQQILTYKIDKLSGVLITHEHYDHIGGIDDLRP 88 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF-----SIESVRVNHS 144 +YA +++ Y K+ P ++ F I+ +RV H+ Sbjct: 89 LGKSQIYAEKKVCEVIQKNMPYCFGEKRYPGSPIIELHEITDKPFYVNNIEIQPIRVMHA 148 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + +TD ++ E + L NA+R Sbjct: 149 RLPIFGFRVGNFA------------------YLTDVKTIEESSIEKLRNLDILVLNALRP 190 Query: 205 GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 +S + + + K T + + ++++ ++ G Sbjct: 191 APHMSHISLSEALEITKKIGAKKTFFTHMNHHMG-FHNLVNQQLPENIQLAYDG 243 >gi|291619324|ref|YP_003522066.1| Rnz [Pantoea ananatis LMG 20103] gi|291154354|gb|ADD78938.1| Rnz [Pantoea ananatis LMG 20103] gi|327395650|dbj|BAK13072.1| ribonuclease Z Rnz [Pantoea ananatis AJ13355] Length = 338 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 53/157 (33%), Gaps = 31/157 (19%) Query: 19 MNMALYGYGSPSSRKWIMIDCG----VSFPKDDL-PGVDLVFPDITFIMKERKNLMAIFI 73 N+ + SS + DCG + F + DL PG L IFI Sbjct: 52 RNVTAIAFTRASSGDTWLFDCGEGTQLQFMRSDLKPG----------------KLDKIFI 95 Query: 74 THAHEDHYGALHDLWSF-----LHVP--VYASPFAIGLLEA--KRVYERVSKKIPCISFQ 124 TH H DH L L + L P VY +++ + I Sbjct: 96 THLHGDHIFGLPGLLTSRSMAGLTTPMTVYGPKGLKAFVDSALSLSSSYTDYPLEVIEIA 155 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 AG+ +D G F + + +NH+I + I Sbjct: 156 AGEVLDDGEFRVTAWPMNHTI-DCFGYRIEQRDKPGF 191 >gi|169797363|ref|YP_001715156.1| putative enzyme [Acinetobacter baumannii AYE] gi|213155823|ref|YP_002317867.1| beta-lactamase domain protein [Acinetobacter baumannii AB0057] gi|301345464|ref|ZP_07226205.1| beta-lactamase domain protein [Acinetobacter baumannii AB056] gi|301511094|ref|ZP_07236331.1| beta-lactamase domain protein [Acinetobacter baumannii AB058] gi|301596666|ref|ZP_07241674.1| beta-lactamase domain protein [Acinetobacter baumannii AB059] gi|169150290|emb|CAM88187.1| putative enzyme [Acinetobacter baumannii AYE] gi|213054983|gb|ACJ39885.1| beta-lactamase domain protein [Acinetobacter baumannii AB0057] Length = 214 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKQWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P + + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPGHVMFY--NKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|229171843|ref|ZP_04299413.1| Beta-lactamase domain protein [Bacillus cereus MM3] gi|228611615|gb|EEK68867.1| Beta-lactamase domain protein [Bacillus cereus MM3] Length = 244 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG GV +I ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGS--------GVLAQI--QKYIT--PSDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGSDAVVYSADSSYIPEFIPF 165 >gi|163755311|ref|ZP_02162431.1| metal-dependent hydrolase [Kordia algicida OT-1] gi|161324731|gb|EDP96060.1| metal-dependent hydrolase [Kordia algicida OT-1] Length = 254 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 60/221 (27%), Gaps = 32/221 (14%) Query: 24 YGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHY 81 +IDCG PD + + I TH H DH Sbjct: 36 VSILISWDDAVYVIDCG---------------PDFRQQMLRANCNKIDGILFTHEHADHT 80 Query: 82 GAL----HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 L + +P+YA + + + + Sbjct: 81 AGLDDIRPFYFRQGDIPMYAH-------KRVFGEFKKRFDYIFRTENKYPGAP----GVI 129 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 V ++ P + V P+ + +TD ++ A + + L Sbjct: 130 QYEVKNNEPFQLQGVTVMPINAWHYKLQVFGYRFDNFAYLTDVKTMEAEERDKLKGLKVL 189 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 NA+R IS +++ + I + +T S + Sbjct: 190 VVNALRIEEHISHFSLEEALEFIAEIQPEKAYLTHISHLLG 230 >gi|20804871|dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sativa Japonica Group] gi|125572255|gb|EAZ13770.1| hypothetical protein OsJ_03695 [Oryza sativa Japonica Group] Length = 416 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 117/348 (33%), Gaps = 18/348 (5%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL-------EAKRVYERVSKKIPCIS 122 A F+TH H+DH L + H P+Y SP LL +A + +S Sbjct: 17 AYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVDASLLRPLAPGASASLS 76 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + + + ++ H P ++ + R +G +++TGD++ + K Sbjct: 77 LSSPSTGRAVSVVVTAIPALH-CPGSLMYLFRGDLGCMLYTGDFRWELRCKRARAAKKAL 135 Query: 183 LCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 L A+ + + L D+T + + + I +I++ ++ + + + Sbjct: 136 LDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIIRAHPDHEIIIGVDT-LGKEDL 194 Query: 243 IIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQ 302 ++ I+ + K++ + + + + + S PR L + + + Sbjct: 195 LLHISRALQTKVIWVWPQRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLDAL 254 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNE---VAIGHIKNRLVEQGVRVIAE 359 + + G K ++ + G I+ + E Sbjct: 255 NTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKSIRCKGLDEGAIEMDYDPLSPPKLFE 314 Query: 360 DAECPVHVSGHPYPNDLKRMYQWIRPQVLVA------IHGEPLHLVAH 401 + S H +L+ +RP ++ + P H +H Sbjct: 315 KDSYSLPYSEHACFAELENFMLIVRPSTVIGIVSTSFCYVNPRHHFSH 362 >gi|69247964|ref|ZP_00604561.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257878135|ref|ZP_05657788.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257881080|ref|ZP_05660733.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257884742|ref|ZP_05664395.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257889666|ref|ZP_05669319.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257892395|ref|ZP_05672048.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|258616362|ref|ZP_05714132.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium DO] gi|260559183|ref|ZP_05831369.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|261207717|ref|ZP_05922402.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289566293|ref|ZP_06446724.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|293552892|ref|ZP_06673550.1| metallo-beta-lactamase family protein [Enterococcus faecium E1039] gi|293563899|ref|ZP_06678322.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|293569419|ref|ZP_06680716.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|294615851|ref|ZP_06695693.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|294617285|ref|ZP_06696926.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|294623518|ref|ZP_06702366.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|68194622|gb|EAN09110.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257812363|gb|EEV41121.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257816738|gb|EEV44066.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257820580|gb|EEV47728.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257826026|gb|EEV52652.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257828774|gb|EEV55381.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|260074940|gb|EEW63256.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|260078100|gb|EEW65806.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289161933|gb|EFD09802.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|291587945|gb|EFF19796.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291591237|gb|EFF22904.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|291596442|gb|EFF27694.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|291597112|gb|EFF28315.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291603026|gb|EFF33220.1| metallo-beta-lactamase family protein [Enterococcus faecium E1039] gi|291604132|gb|EFF33643.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] Length = 208 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G I N L + ++ID P +D + K + +AI +T Sbjct: 9 GMIEENCYLV----YNEEALLIID-----PGEDAERIKQEI------KKTNQQPVAILLT 53 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH GA+ L ++ +PVY SP LE K + + + V V Sbjct: 54 HTHYDHIGAVEPLRAYYQIPVYVSP-----LEQKWLGDPILNLSGLGRHDDIADVIVSPA 108 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E +++ V+ +P +I + + DD Sbjct: 109 EYEFEMKTYTLGNMSFRVVPTPGHSIG-SVSFIFDD 143 >gi|315173695|gb|EFU17712.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1346] Length = 220 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + K AI +TH H D Sbjct: 27 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKKPAAILLTHTHYD 71 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L + +PVY SP LE + + + V E Sbjct: 72 HIGAVEELRNHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 126 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 127 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 156 >gi|309775515|ref|ZP_07670515.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916609|gb|EFP62349.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 203 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 21/87 (24%) Query: 26 YGSPSSRKWIMIDCGVSFP-----KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 Y ++ID G D G+ + AI +TH H DH Sbjct: 17 YLLWEDHHVLIIDPGSKSAKLQETIDSQDGI----------------VDAIVLTHGHFDH 60 Query: 81 YGALHDLWSFLHVPVYASPFAIGLLEA 107 + L H PVY + + +L+ Sbjct: 61 IAGVDALVKKYHCPVYINELDMAMLQD 87 >gi|238899158|ref|YP_002924840.1| putative hydroxyacylglutathione hydrolase with metallo-hydrolase/oxidoreductase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259492011|sp|C4K7Z9|GLO2_HAMD5 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|229466918|gb|ACQ68692.1| putative hydroxyacylglutathione hydrolase with metallo-hydrolase/oxidoreductase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 249 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 13/74 (17%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW 88 S++ +++D G + P + + + P AI +TH H+DH G + L Sbjct: 19 DSNQHCVIVDPGEASPVESVLTYKGLLP------------QAILLTHHHQDHLGGVPQLL 66 Query: 89 SFL-HVPVYASPFA 101 +PVY Sbjct: 67 RRFPDIPVYGPKET 80 >gi|291220934|ref|XP_002730478.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)-like [Saccoglossus kowalevskii] Length = 939 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 115/366 (31%), Gaps = 32/366 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W +Y SP + LL AK ++ + + D+ Sbjct: 28 FLTHMHADHTSGLSPSWKST---IYCSPVSAKLLRAKFEIQQSLIQSLEVGVGHVIPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 ++ + NH P ++ + G +++TGD++ D L + + Sbjct: 85 YGHETMTVTPIDANH-CPGSVIYLFVGYFGTVLYTGDFRYTSDMFL----NPPLCKHLC- 138 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + L D+T S + I +I+++ V ++ + ++DIA Sbjct: 139 --VDVLYLDNTYNNPNCLFPSREECTAKIIEIIQSHP-QHDVKLGMHTLGKENLLVDIAR 195 Query: 249 QIGRKIVLLGS--------SLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 + IV+ S + V + D G I + + Sbjct: 196 AVQEWIVVSPSRYSTLEQLKMPNVFTTETDAGRIHLVSSYQITKKIMK-KWNDKRPTIGI 254 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 ++L ++V + + + +++ + + I + Sbjct: 255 LPTALYTSLNGQPYSSQKDVFVVPYSD--------HSSYYELFKFVSQVRPKTIIPIVKQ 306 Query: 361 AECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPVRNGK 420 V S +D++ + + P+ +V + K + + + Sbjct: 307 KSFGVFGSSISDLSDMRNFKECMNPEHVVPFEIPITVVSYMKSTHQASTDSELNFMEISD 366 Query: 421 MLRLFP 426 + Sbjct: 367 KITHVK 372 >gi|78186471|ref|YP_374514.1| metallo-beta-lactamase superfamily protein [Chlorobium luteolum DSM 273] gi|78166373|gb|ABB23471.1| metallo-beta-lactamase superfamily protein [Chlorobium luteolum DSM 273] Length = 464 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 68/494 (13%), Positives = 134/494 (27%), Gaps = 101/494 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F G + + + G + +++DCG+ D V+ F Sbjct: 1 MEIEFY--GATERVTGSCHILRVGRFT----VLLDCGLIQGSD----VEEALNRAPFAFD 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY----------- 111 + + A+ ++H H DH G + L PV+ L + Sbjct: 51 -PERVEAMILSHGHIDHSGRIPLLVKRGFTGPVFTGDATADLARVLLLDSASLAERDALD 109 Query: 112 ---------ERVSKKIPCISFQAGDKVDVGAFSI-----------ESVRVNHSIPETMAL 151 +R ++ + R I + + Sbjct: 110 RRKHPRTAADRHAEPLYTRDDAVRALNSFKPVPYGRRFPVVPGLEACFRDAGHILGSAVV 169 Query: 152 VIRSPVGNI----VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + G + V +GD IL D +++ AL+ +ST R Sbjct: 170 ELWLTEGGVSRKLVFSGDLGQYGSPILN---DPEAVTD-----ADALIIESTYGDRLHRD 221 Query: 208 ISE--KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI----GRKIVLLG--- 258 + + + + + + G +L+ FS + R + ++ + + G + + Sbjct: 222 YDQTLQELGEIFNSASRGS-GNILIPAFS--IGRSQELLYLFARHYEEWGMQHWQVYLDS 278 Query: 259 -----SSLK---------------RVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIA 298 +S+ R + + R I+IA Sbjct: 279 PMAIEASMIYLGYPELFDREALASRNDKRLLPTLKNLHFTPKVEQSQAINKERSGAIIIA 338 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIA 358 L L R + ++ + G I E + Sbjct: 339 GSGMCNGGRILHHLKHNISR-----PECHLLITGYQAEG--TLGRQIVEGAAEVEIHGRH 391 Query: 359 EDAECPVHV----SGHPYPNDLKRMYQWIR--PQVLVAIHGEPLHLVAHKELALQEGIAC 412 VH S H D+ R + P+V V +HG+P A + + Sbjct: 392 YPVAAAVHTVGGLSAHGDREDMLRWVSGFKSSPRVFV-VHGDPAAKEAFRNSIEERLQLT 450 Query: 413 VPPVRNGKMLRLFP 426 R G+ Sbjct: 451 ASIPRPGERYDFSS 464 >gi|270340091|ref|ZP_06007020.2| metallo-beta-lactamase superfamily protein [Prevotella bergensis DSM 17361] gi|270332712|gb|EFA43498.1| metallo-beta-lactamase superfamily protein [Prevotella bergensis DSM 17361] Length = 256 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 18/202 (8%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP 94 ++ID GV D + ++ ITH H DH ++ L ++P Sbjct: 8 LLIDAGVGIRTLKKHFKDYNI--------QLSKANSLIITHDHADHVKSVGSLSKEFNLP 59 Query: 95 VYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR 154 VY++ ++ + + F+I + H + + I+ Sbjct: 60 VYSTQKVHAGIDNNWCVRCKIMPERIKFIDKNTQFQLSDFTITPFDIPHDSTDNVGYCIQ 119 Query: 155 SPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 V D +TD+ + + ++ + +K Sbjct: 120 YQNITFVLMTDVG--------HLTDE--IKEYIGKANYLVIEADYESEMLDRGSYPTHLK 169 Query: 215 KNIYDIMKNAKGCVLVTTFSSS 236 K I + T + + Sbjct: 170 KRIRGPYGHMSNVECATAIAEN 191 >gi|126282067|ref|XP_001365312.1| PREDICTED: similar to Cleavage and Polyadenylation specificity factor (CPSF) 100kD subunit isoform 1 [Monodelphis domestica] Length = 782 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|17230712|ref|NP_487260.1| hypothetical protein all3220 [Nostoc sp. PCC 7120] gi|17132315|dbj|BAB74919.1| all3220 [Nostoc sp. PCC 7120] Length = 555 Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 67/461 (14%), Positives = 148/461 (32%), Gaps = 55/461 (11%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK------ERKNL----MA 70 L G I++DCG++ DI+ I K +R N Sbjct: 35 CLLVRMGP----HRILLDCGLA--------------DISSIQKSLTPSVKRGNPPSPADL 76 Query: 71 IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVYERV-SKKIPCISFQAGDK 128 + +THAH DH G L +F ++P+Y S LL + C + Sbjct: 77 VLVTHAHPDHARGLLALHQAFPNLPIYGSEVTSKLLPLNWLDHNPQEIPQLCHALPLRSP 136 Query: 129 VDV-GAFSIESVRVNHSIPETMALVIRS----PVGNIVHTGDWKLDDDAILGDVTDKDSL 183 V++ E H +P +A+++ +++TGD+ L + ++ + L Sbjct: 137 VELQDGLVAEIFPCGH-LPGAVAILLTYTTEQRSYKLLYTGDFFLSNSRLVEGL----RL 191 Query: 184 CAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + L+ + T E + + I + + + V++ T + + + Sbjct: 192 EELRGIDLNVLIIEGTYGTSRHPHRRNQENQLAERINRAISD-RYSVVLPTPALGLGQEL 250 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDESFGLYPREQLIVIA 298 ++ + G L V A+ +G ++ + + Sbjct: 251 LMLLRSHHH-----FTGRDLDIWVDGAVAIGCDAYLELLPHLPASVQNFARHQPLFWDER 305 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDT-VIFSSRAIPGNEVAIGHI-KNRLVEQGVRV 356 + A + G+ + L + + + + G + + + V + Sbjct: 306 VRPRVRRLQAENRSIVGKSPCIVLTDSTSDLEQYCQPETGPWLILLPEKIDIKVNKKYSA 365 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + + H ++ +RPQ +V +HG P +L L + + Sbjct: 366 PTTVESYLL--AQHSDGPGTTQLIHNLRPQHVVFVHGSPAYLADLTCLEELQNRYHIHSP 423 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 M+ L + + + +G + I + Sbjct: 424 AAETMVELLIGETFLQPAPPETNYEGELTELGTVITISIPE 464 >gi|323140448|ref|ZP_08075376.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] gi|322415016|gb|EFY05807.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] Length = 271 Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L +FITH H DH L VPVY+S + AK S Sbjct: 51 NELDGVFITHEHVDHVRGLATFLKNYQVPVYSSVLTWRAILAK----DSSLVRQNCRLID 106 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSP 156 +++ G ++S + H + S Sbjct: 107 NNRLLCGDLEVQSFSIPHDAVDPHGYTFTSR 137 >gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera] Length = 1390 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 123/411 (29%), Gaps = 60/411 (14%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY L WS + ++ S L V + V + Sbjct: 73 FLSHFHSDHYSGLSPKWS--NGIIFCSNTTARL----LVEVLGVSSLFVYPLAVSQPVLI 126 Query: 132 GAFSIESVRVNHSIPETMALVIRSPV-----GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + + NH P + + + P VHTGD++ + L Sbjct: 127 DGCEVALLDANH-CPGAVQFLFKVPGVDGRFERYVHTGDFRFCESMKLEPC--LGEFV-- 181 Query: 187 GNEGILALMCDSTNAMREGTCISEKG----IKKNIYDIMKNAKGCV-----LVTTFSSSV 237 G A+ D+T + S+ I + I I KG + LV T+ + Sbjct: 182 ---GSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGLMKSVLFLVATYV--I 236 Query: 238 SRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVI 297 + R +++I+ + KI + G + SV +G + ++ ++ Sbjct: 237 GKERILLEISRRRNCKIHVDGRKM----SVLRVLGYEDGGVFTEDESKSDVHVVGWNVLG 292 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVI 357 T P +M+ + + + + G + N+ + Sbjct: 293 ETWPYFRPNFV-------KMKEIMIERGYSKVVGFVPT-GWTYEVKR--NKFAMRTKDSF 342 Query: 358 AEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI-----------HGEPLHLVAHKELAL 406 V S H ++L+ +++RP+ ++ H L Sbjct: 343 EIHL---VPYSEHSNYDELREYVKFLRPKRVIPTVGLDIEKLDSKHANA-MRKHFAGLVD 398 Query: 407 QEGIACVPPVRNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 + I + + L D + + + + + Sbjct: 399 EMAIKHEFL-KGFQRGCLEADENKHVTFSKRKTKESTESGFLAVSSSSMQE 448 >gi|253997317|ref|YP_003049381.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253983996|gb|ACT48854.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 257 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 17/163 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG G G N + + +M+DCG S + + + Sbjct: 1 MRFASLG-SGSAG-NALVVE----VNNTRLMLDCGFSIKETTS--------RLARLNLSP 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++L + ITH H+DH G + H+PV+ + + + E + + + Sbjct: 47 EDLAGVVITHEHDDHAGGAFKFAAAHHIPVWLTYGTLKMAERYFPRQH---DLQLNVIDS 103 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 V + V H E + V + D Sbjct: 104 HTPFSVADVEVYPYPVPHDAREPVQFVFGDGQRRLGVLTDVGR 146 >gi|228957463|ref|ZP_04119217.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802217|gb|EEM49080.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|149910425|ref|ZP_01899066.1| anaerobic nitric oxide reductase flavorubredoxin [Moritella sp. PE36] gi|149806484|gb|EDM66455.1| anaerobic nitric oxide reductase flavorubredoxin [Moritella sp. PE36] Length = 506 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 26/219 (11%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + + I I HA EDH GAL L + + + P+Y + AI + + Sbjct: 65 LEIDLNKIDYIVINHAEEDHAGALAALLNKIPNTPIYCTENAIDSITG----HHHHPEWN 120 Query: 120 CISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 + GD +D+G + H P++M + ++ + D A Sbjct: 121 FNVVKTGDTLDLGNGKQLVFIETPMLHW-PDSMMTYMTGDA--VLFSND------AFGQH 171 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D+ + L C A + I +I+ ++ T Sbjct: 172 YCDERLFNDEVDTKELMDQCLRYYANILTPFSP--LVTAKINEILSFNLPVDMIATAHGV 229 Query: 237 VSR------IRSIIDIAEQIGR-KIVLLGSSLKRVVSVA 268 V R I + A++ +I + S+ Sbjct: 230 VWRDNPIQIIEQYLTWADKYQEDRITIFYDSMSNNTRTM 268 >gi|30019240|ref|NP_830871.1| metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|229126495|ref|ZP_04255509.1| Beta-lactamase domain protein [Bacillus cereus BDRD-Cer4] gi|29894783|gb|AAP08072.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|228656884|gb|EEL12708.1| Beta-lactamase domain protein [Bacillus cereus BDRD-Cer4] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|50086246|ref|YP_047756.1| hypothetical protein ACIAD3254 [Acinetobacter sp. ADP1] gi|49532222|emb|CAG69934.1| putative enzyme [Acinetobacter sp. ADP1] Length = 215 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 31/173 (17%) Query: 20 NMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHA 76 N ++ S++ ++ID G V ++ + + A+++TH Sbjct: 16 NCSIL--WDSESKEAVLIDAGGEAVKLKQE--------------VEAMGLKVKALWLTHG 59 Query: 77 HEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDKV 129 H DH GA+ +L VPV F + +++ P G+ + Sbjct: 60 HLDHAGAVGELAKLWQVPVIGPHKDDQFWLDMIQDVSKRYGFPIPQPVQVDTWLEGGEIL 119 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 ++G E P + SP +++ TGD TD Sbjct: 120 ELGQTKFEVRFAPGHTPGHVMFY--SPEYHLLWTGDVLFKGS---IGRTDFPR 167 >gi|328552383|gb|AEB22875.1| YflN [Bacillus amyloliquefaciens TA208] Length = 264 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 21/84 (25%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-------LMAIF 72 N+ + + I++D G+ P+ I +E K L A+ Sbjct: 32 NVYFIE-NPSAPGEIILVDAGM--PQSA-----------EMITEEMKRRFGDGYQLKAVM 77 Query: 73 ITHAHEDHYGALHDLWSFLHVPVY 96 +TH H DH GA+ +L VPVY Sbjct: 78 LTHGHFDHVGAIEELLEMWDVPVY 101 >gi|229172355|ref|ZP_04299914.1| Zn-dependent hydrolase [Bacillus cereus MM3] gi|228610826|gb|EEK68089.1| Zn-dependent hydrolase [Bacillus cereus MM3] Length = 55 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%) Query: 501 HKLLLKTVITTVVDLPQFRRKDLKLLRESISSALRSLLKKVWGKKPLVTVFINKI 555 K L K + T+ +L + +L+ + AL + +KP++ I ++ Sbjct: 1 MKELNKLAVITINNLKKENVNSWGILKREVREALGKFIYTSTKRKPMILPIIIEV 55 >gi|154152069|ref|NP_001093847.1| protein artemis [Bos taurus] gi|151554853|gb|AAI48007.1| DCLRE1C protein [Bos taurus] gi|296481454|gb|DAA23569.1| DNA cross-link repair 1C [Bos taurus] Length = 710 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 103/339 (30%), Gaps = 41/339 (12%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKELLLTSPKYRFWEKRIVSIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQISLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAKGEAA 145 Query: 175 GDVTDKD--SLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 + I + + C+ +GI + + + + V+ Sbjct: 146 RMELLHSGGRVKDIQSVYLDTTFCNPKYYQIPSREECLRGIMELVRSWISRSPYHVVWLN 205 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 ++ +++E+ G ++ + + R + R+ Sbjct: 206 CKAAYGYEYLFTNLSEEFGLQVHVDKLDMFRNM---------------PDILHHLTTDRD 250 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 I + E ++L G ++ I S G +I Sbjct: 251 TQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTNII------ 304 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 + ++ S H +++K +I P + Sbjct: 305 ---MRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPN 340 >gi|219668589|ref|YP_002459024.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219538849|gb|ACL20588.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 275 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 23 LYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 L G +W+++D G+ ++ V + AI +TH H DH G Sbjct: 35 LVGIPEEEGSQWVLVDTGLE--NSSQFILESVHSRFG----KNSRPQAIILTHGHFDHVG 88 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDVGAFSI 136 ++ +L + VPVYA + L K+ Y + ++D+G + I Sbjct: 89 SVKELAEYWDVPVYAHTLELPYLTGKKDYPLADPGVGGGLVSGISTTFPHTRIDLG-YRI 147 Query: 137 ESVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + +P + +P H ++ Sbjct: 148 FPLPDHGEVPGMPGWQWVHTPGHTDGHISLFR 179 >gi|296501794|ref|YP_003663494.1| metal-dependent hydrolase [Bacillus thuringiensis BMB171] gi|296322846|gb|ADH05774.1| metal-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|295697809|ref|YP_003591047.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] gi|295413411|gb|ADG07903.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] Length = 261 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 55/168 (32%), Gaps = 21/168 (12%) Query: 31 SRKWIMIDCGVSFPKDD----LPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 ++ID G+S + D GV L A+ +TH H DH L Sbjct: 21 DDVRLLIDAGISARRLDRSLQQHGV------------NPDQLTAVVVTHEHRDHVHGLRV 68 Query: 87 LWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP 146 VP++A+ L + C + AG V G + E V V+H Sbjct: 69 FARRHAVPIWATGGTWTELGDLSAEVGSER---CFTLTAGKVVYFGGVAAEPVAVSHDAR 125 Query: 147 ETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 E + +V D + D D L + + G+L Sbjct: 126 EPVMFCFHHEGKKLVLATDLGFVGDRLRGAIADADAYILESNHDVGML 173 >gi|254429962|ref|ZP_05043669.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] gi|196196131|gb|EDX91090.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] Length = 563 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 58/281 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F+ G +G++ + ++DCG+ + + D+ + Sbjct: 1 MEINFI--GPLGKVTGSCTWMRDHKRGWN--FLVDCGMQQGE--------ITADVWNHQE 48 Query: 64 ERKN---LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------------- 106 + + I +THAH DH G + L+ + VY + + E Sbjct: 49 WPFDPSEIQFIVLTHAHMDHSGLIPSLYESGFNGKVYCTEETARIAEIQYSNAMPLNPEL 108 Query: 107 ------AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS----- 155 K + K ++ D+ ++ R H I +++ I Sbjct: 109 FTKANINKVKWSHFKKAPVLGNYHPVDQDLF----VQFQRSGH-ILGAVSVSIYWGKPMS 163 Query: 156 -PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG------ILALMCDSTNAMREGTCI 208 +IV +GD + N G + + + + + + Sbjct: 164 PEQRSIVFSGDIGPQPQDNEV----LPIIRHTMNPGHHNYAVMESTYGSTNRSPSDKEPV 219 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 + K++ D N +G +L+ F+ + R + ++ Sbjct: 220 IRRDHLKSLIDRTINTQGTLLMPAFA--LGRSQDVLFDLHA 258 >gi|206976596|ref|ZP_03237502.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217958669|ref|YP_002337217.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|229137877|ref|ZP_04266476.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST26] gi|206745279|gb|EDZ56680.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217064618|gb|ACJ78868.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|228645534|gb|EEL01767.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST26] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E+ I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ESGFHSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|220914207|ref|YP_002489516.1| beta-lactamase [Arthrobacter chlorophenolicus A6] gi|219861085|gb|ACL41427.1| beta-lactamase domain protein [Arthrobacter chlorophenolicus A6] Length = 206 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + AI +THAH DH GA ++ + P+ + + L + P + GD Sbjct: 57 VKAILLTHAHNDHIGAAREVAEAVGAPIILNREDLVL-----WEQEYPDAKPDQYHEDGD 111 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + +VG ++++ P + + S V TGD + Sbjct: 112 EFEVGGAVLKAIHTPGHSPGSTCFYLESEGT--VFTGDTLFN 151 >gi|27376253|ref|NP_767782.1| hypothetical protein bll1142 [Bradyrhizobium japonicum USDA 110] gi|27349393|dbj|BAC46407.1| bll1142 [Bradyrhizobium japonicum USDA 110] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 34/190 (17%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +L F+ G G G G + + +IDCG S P + Sbjct: 1 MQLRFVGCGDAFGSG--GRLNTCFHVAGREAN--FLIDCGAS-----------ALPALKR 45 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG---LLEAKRVY------ 111 + +R ++ I ITH H DH+ L + P I +E + Sbjct: 46 LEIDRNDIDLILITHFHGDHFAGLPFVLLDAQFSRRTRPLTIAGPQGIETRLREVMEVLF 105 Query: 112 -----ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM--ALVIRSPVGNIVHTG 164 R ++ + +G + D GA ++ V H A + + + ++ Sbjct: 106 EHSSKTRQRFELSVVELASGQRRDFGAVTVTPYPVVHGESGGPFLAYRVETEGRTLAYSA 165 Query: 165 DWKLDDDAIL 174 D + + I Sbjct: 166 DTEWTETLIP 175 >gi|312143971|ref|YP_003995417.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] gi|311904622|gb|ADQ15063.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] Length = 208 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 58/201 (28%), Gaps = 18/201 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + ++ID P D + + NL I THAH DH GA Sbjct: 15 CYIITENNNALIID-----PGGDGEKI------YQHLEDNHLNLKIIVNTHAHFDHIGAN 63 Query: 85 HDLWSFLHVPVYASPFAIGL-------LEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 L +Y L + + + GD +D + E Sbjct: 64 EFLQEKTKAKIYIHQNEADKLVSAEKNLSGYFTKDEIISPPADKLLKEGDIIDFESMKFE 123 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + +AL + V + + +D + L IL L Sbjct: 124 VIHTPGHSSGGIALYLEQENIVFVGDTIFSNGIGRTDINDSDFELLKETIENKILNLPDK 183 Query: 198 STNAMREGTCISEKGIKKNIY 218 + G+ K KKN++ Sbjct: 184 TEFCPGHGSRGYIKDFKKNVW 204 >gi|302524147|ref|ZP_07276489.1| hypothetical protein SSMG_00529 [Streptomyces sp. AA4] gi|302433042|gb|EFL04858.1| hypothetical protein SSMG_00529 [Streptomyces sp. AA4] Length = 246 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 31/189 (16%) Query: 7 VFLPLGGVG---EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 LG G E G A G+ +++D G + F Sbjct: 6 RLTVLGSCGAWPEAGRACA--GFLLSHQDFHVVLDLG--YGAAPQL----------FRHV 51 Query: 64 ERKNLMAIFITHAHEDH---YGALH---DLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 L A+ +TH H DH AL + +P+Y +P + L A + + Sbjct: 52 PADRLDAVVVTHEHPDHLADVSALGRARHYTTDRKLPMYCTPGTVDRLAAM--EPSPAPE 109 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 + D+G F + + + H +P + + + + +TGD + Sbjct: 110 EIFDLHDLDPETDLGPFRLTTALLPHHVPN-YGVRLTTSGYTLAYTGD-----TEPAPHL 163 Query: 178 TDKDSLCAI 186 TD + Sbjct: 164 TDLARDADV 172 >gi|94986360|ref|YP_605724.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94556641|gb|ABF46555.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 219 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 23/163 (14%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LP G + E N L + + + ++D P DD V + + Sbjct: 11 RVWVLPTGPLQE---NALLV---AGQAGEGFLVD-----PGDDAEQV------LALVRDS 53 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKI 118 + I +THAH DH GA+ + L VPVY P + + + A+ + Sbjct: 54 GVKVRGILLTHAHFDHIGAVQPVREALAVPVYLHPADLSIYQQGEASAARWGLPFTQPEA 113 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 P + G G + + + P + V +S Sbjct: 114 PDVEIAQGQTFTAGDLRLTARELPGHAPGHVVFVAQSGEEPGF 156 >gi|229197279|ref|ZP_04324010.1| Metallo-beta-lactamase [Bacillus cereus m1293] gi|228586238|gb|EEK44325.1| Metallo-beta-lactamase [Bacillus cereus m1293] Length = 281 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G P S ++++D G+ +++ I+ K AI +TH H DH G Sbjct: 41 GHPKSNDFVLVDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 92 IIELIKYWDVPVYAHQLEIPFL 113 >gi|330866106|gb|EGH00815.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 466 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 37/209 (17%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ +TH H DH G + +L + P+ S + LL K + ++I Sbjct: 42 IRALLVTHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDILKIEFAHDPEQIQR 101 Query: 121 ISFQAGDKVDVGAFSIESVRVNHS-------------------IPETMALVIRSPVGNIV 161 ++ F V+H I + ++ +V Sbjct: 102 YLELINKRIIALPFDNWFSLVDHETLHCRVRLQRAGHILGSAYIECDLHYPVQERSMRVV 161 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDI 220 +GD L E L+ +ST R S + + I D Sbjct: 162 FSGDLGASHTPFLP--------APKPPERANVLILESTYGDRLHEDRSIRQQALEQIIDK 213 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 214 ALEDNGTVLIPAFS--IGRTQELLYELED 240 >gi|262280805|ref|ZP_06058588.1| metallo-beta-lactamase superfamily protein [Acinetobacter calcoaceticus RUH2202] gi|262257705|gb|EEY76440.1| metallo-beta-lactamase superfamily protein [Acinetobacter calcoaceticus RUH2202] Length = 214 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P +V + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPG--HVVFYNKKHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|148675985|gb|EDL07932.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform CRA_e [Mus musculus] Length = 617 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 119/375 (31%), Gaps = 51/375 (13%) Query: 40 GVSFPK--DDLPGVDLVFPDITFIMKERKNLMA--IFITHAHEDHYGAL--HDLWSFLHV 93 G+ FP G +P I+ +R+NL A F++H H+DH L L L Sbjct: 8 GLVFPGAMSSFQGQMAEYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLEC 67 Query: 94 --PV--YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV--------GAFSIESVRV 141 V Y SP LL Y +I I + ++ + + + Sbjct: 68 SLKVFLYCSPVTKELLLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPA 127 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG----ILALMCD 197 H P ++ + + G +++TGD++L + + + G I ++ D Sbjct: 128 GH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEA-------SRMELLHSGGRVKDIQSVYLD 179 Query: 198 STNAMREGTCISEKG-IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 +T I + + I +++++ VT V ++ G + + Sbjct: 180 TTFCDPRFYQIPSREQCLRGILELVRSW-----VTRSPHHVV----WLNCKAAYGYEYLF 230 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 S + V V V + + R I + E +L G Sbjct: 231 TNLSEELGVQV--HVDKLDMFKNMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCGI 288 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K A I S G ++ V ++ S H +++ Sbjct: 289 TSQNKTALHTISIKPSTMWFGERTRKTNVI---------VRTGESSYRACFSFHSSFSEI 339 Query: 377 KRMYQWIRPQVLVAI 391 K +I P + Sbjct: 340 KDFLSYICPVNVYPN 354 >gi|148675984|gb|EDL07931.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform CRA_d [Mus musculus] Length = 704 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 119/375 (31%), Gaps = 51/375 (13%) Query: 40 GVSFPK--DDLPGVDLVFPDITFIMKERKNLMA--IFITHAHEDHYGAL--HDLWSFLHV 93 G+ FP G +P I+ +R+NL A F++H H+DH L L L Sbjct: 3 GLVFPGAMSSFQGQMAEYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLEC 62 Query: 94 --PV--YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV--------GAFSIESVRV 141 V Y SP LL Y +I I + ++ + + + Sbjct: 63 SLKVFLYCSPVTKELLLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPA 122 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG----ILALMCD 197 H P ++ + + G +++TGD++L + + + G I ++ D Sbjct: 123 GH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEA-------SRMELLHSGGRVKDIQSVYLD 174 Query: 198 STNAMREGTCISEKG-IKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 +T I + + I +++++ VT V ++ G + + Sbjct: 175 TTFCDPRFYQIPSREQCLRGILELVRSW-----VTRSPHHVV----WLNCKAAYGYEYLF 225 Query: 257 LGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGE 316 S + V V V + + R I + E +L G Sbjct: 226 TNLSEELGVQV--HVDKLDMFKNMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCGI 283 Query: 317 MRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDL 376 K A I S G ++ V ++ S H +++ Sbjct: 284 TSQNKTALHTISIKPSTMWFGERTRKTNVI---------VRTGESSYRACFSFHSSFSEI 334 Query: 377 KRMYQWIRPQVLVAI 391 K +I P + Sbjct: 335 KDFLSYICPVNVYPN 349 >gi|229824739|ref|ZP_04450808.1| hypothetical protein GCWU000182_00087 [Abiotrophia defectiva ATCC 49176] gi|229791068|gb|EEP27182.1| hypothetical protein GCWU000182_00087 [Abiotrophia defectiva ATCC 49176] Length = 531 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 74/506 (14%), Positives = 147/506 (29%), Gaps = 107/506 (21%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L F+ G E+ + + I++D G+ G+++ + + Sbjct: 1 MKLHFI--GADHEVTGSAHFLSACGKN----ILVDYGM------EQGINVF--ENAELPV 46 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRV----------YE 112 ++ + +THAH DH G + L+ +YA+ L + Sbjct: 47 SPSDIDYLLVTHAHIDHTGMIPALYKNGFKGEIYATTATCDLCDIMLRDSAHIQEFEAEW 106 Query: 113 RVSK----------------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 + K K + V ++ V H + + + Sbjct: 107 KNRKNKRAGKEKFNPPYTMEDVEGVLKRFNKVDYNEEFVLCEGITVSFTDVGH-LLGSAS 165 Query: 151 LVIRSPV----GNIVHTGDWKLDDDAI---LGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 + I IV +GD + I TD ++ +ST R Sbjct: 166 IKISITEGDTTKVIVFSGDIGNINQPIIKDPEYTTD-----------ADYVIMESTYGDR 214 Query: 204 EG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 + + D G V++ +F+ V R + I+ +I ++ G Sbjct: 215 LHGERIDYVAELSDILNDTFSRG-GNVVIPSFA--VGRTQEILYFMRKIKEDRLVYGYD- 270 Query: 262 KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRN-V 320 V +D + + ++ + E + +I G L + Sbjct: 271 --DFEVFVDSPLAIEATNIFNENYADCFDEEAMELIRAGINPISFDGLKTSVTSTDSIAI 328 Query: 321 KLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC----------------- 363 +K VI S+ + H+K+ L + V+ + Sbjct: 329 NFDKKPKVIISASGMCEAGRIRHHLKHNLWRKECTVLFVGYQAAGTLGRILIDGAERVKL 388 Query: 364 -------------PVHVSGHPYPNDLKRMYQWIRPQ--VLVAIHGEPLHLVAHKELALQE 408 VSGH N L P+ + +HGE + ++ ++E Sbjct: 389 FGEEIEVNAEIKVLAGVSGHADKNGLISWISAFNPKPDAVFIVHGEDKVVENFRKTLIEE 448 Query: 409 GIACVPPVRNGKMLRLFPDPIEIIDE 434 +G + L E I E Sbjct: 449 YKHNAYAPYSGSIYDLALGEWEYIAE 474 >gi|213968713|ref|ZP_03396855.1| hypothetical protein PSPTOT1_1021 [Pseudomonas syringae pv. tomato T1] gi|301381328|ref|ZP_07229746.1| hypothetical protein PsyrptM_01788 [Pseudomonas syringae pv. tomato Max13] gi|302061498|ref|ZP_07253039.1| hypothetical protein PsyrptK_16045 [Pseudomonas syringae pv. tomato K40] gi|302130035|ref|ZP_07256025.1| hypothetical protein PsyrptN_01505 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926646|gb|EEB60199.1| hypothetical protein PSPTOT1_1021 [Pseudomonas syringae pv. tomato T1] Length = 480 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 114/402 (28%), Gaps = 62/402 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G V + + + SS ++IDCG S + G +++ + + + A+ Sbjct: 10 GAVDTVTGSCHQLRMDASSS---LLIDCG-SVQERGASG------EVSPFGFDPEAIRAL 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQ 124 ITH H DH G + +L + P+ S + LL K + ++ Sbjct: 60 LITHVHNDHVGRIPELLASGYEGPILCSEPSAHLLPLVMEDSLKIQFAHDPEQAERHLAL 119 Query: 125 AGDKVDVGAF--------------SIESVRVNH-----SIPETMALVIRSPVGNIVHTGD 165 ++ F + R H I + + +V +GD Sbjct: 120 INKRIIALPFDNWFSLVDRESLHCRVRLQRAGHILGSAYIECDLHYPLEGCSIRVVFSGD 179 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNA 224 L E L+ +ST R S + + I D Sbjct: 180 LGASHAPFLP--------APKPPEHADILVLESTYGDRLHEDRSIRQQELERIIDRALED 231 Query: 225 KGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDE 284 G VL+ FS + R + ++ E I R+ + G + + D Sbjct: 232 NGTVLIPAFS--IGRTQELLYELEDILRRKMPSGDAAHSSARLNEDDVPPADWSRLPIIL 289 Query: 285 SFGL------------YPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS- 331 L ++ + + +P ++ + Sbjct: 290 DSPLASRFTRAYQSFEDYWDEGARLRLDAGRKPLGFDQLITINTHEEHLRTVNYLASTAR 349 Query: 332 -SRAIPGNEV-AIGHIKNRLVEQGVRVIAEDAECPVHVSGHP 371 + I GN + A G I N L G P Sbjct: 350 PAIVIAGNGMCAGGRIVNYLKAMLGDPRHNVVFVGYQGKGTP 391 >gi|325479539|gb|EGC82635.1| metallo-beta-lactamase domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 200 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 19/153 (12%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 NM + + + ++DC ++P + + +I + I TH H D Sbjct: 14 NMYVVS---DENNEGFLVDC--AYPSERVK---------QYIEDNNIKINFIIQTHTHFD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP-CISFQAGDKVDVGAFSIES 138 H L + V VYAS + + K S + I D ++I + Sbjct: 60 HVLGLEYFKNLYDVNVYASEDSKEIANDKDYNLAYSYDVNVPIDNYLKDGEVFSKYNILA 119 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++ ++M+ + ++ +GD Sbjct: 120 IKTPGHTLDSMSYKVDD----VLFSGDTLFKQS 148 >gi|323336337|gb|EGA77605.1| Ysh1p [Saccharomyces cerevisiae Vin13] Length = 745 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 62/242 (25%), Gaps = 42/242 (17%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF--LHV 93 M+D G+ L P + + + I+H H DH +L + Sbjct: 1 MLDAGIHPAYQGL----ASLPFYD--EFDLSKVDILLISHFHLDHAASLPYVMQRTNFQG 54 Query: 94 PVYASPFAIGLLEAKRV-------------------------YERVSKKIPCISFQAGDK 128 V+ + + + V + Sbjct: 55 RVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHST 114 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 VDV + H + I ++ TGD+ + D L + Sbjct: 115 VDVNGIKFTAFHAGH-VLGAAMFQIEIAGLRVLFTGDYSREVDRHLNS-------AEVPP 166 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ +ST + +K I V ++ R + I+ I + Sbjct: 167 LSSNVLIVESTFGTATHEPRLNRE-RKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILD 225 Query: 249 QI 250 + Sbjct: 226 EY 227 >gi|314937536|ref|ZP_07844864.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|314941472|ref|ZP_07848361.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|314949652|ref|ZP_07852973.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] gi|314951834|ref|ZP_07854872.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|314992779|ref|ZP_07858183.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|314996536|ref|ZP_07861574.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|313589322|gb|EFR68167.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|313592712|gb|EFR71557.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|313596008|gb|EFR74853.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|313599724|gb|EFR78567.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|313643079|gb|EFS07659.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|313643991|gb|EFS08571.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] Length = 221 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 15 GEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFIT 74 G I N L + ++ID P +D + K + +AI +T Sbjct: 22 GMIEENCYLV----YNEEALLIID-----PGEDAERIKQEI------KKTNQQPVAILLT 66 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH GA+ L ++ +PVY SP LE K + + + V V Sbjct: 67 HTHYDHIGAVEPLRAYYQIPVYVSP-----LEQKWLGDPILNLSGLGRHDDIADVIVSPA 121 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 E +++ V+ +P +I + + DD Sbjct: 122 EYEFEMKTYTLGNMSFRVVPTPGHSIG-SVSFIFDD 156 >gi|229014191|ref|ZP_04171312.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] gi|228747145|gb|EEL97027.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] Length = 245 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + +ID +SF + K K + I ITHAH+D Sbjct: 27 NCYFVEEEAGLT----LIDAALSFCGKKIL---------ESAQKIGKPITNIIITHAHDD 73 Query: 80 HYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 H GAL + L VPVY S LLE ++ + P Sbjct: 74 HIGALDVIKKELPDVPVYISKRDAHLLEGDMALQKGERNTPIKV 117 >gi|229108651|ref|ZP_04238262.1| Beta-lactamase domain protein [Bacillus cereus Rock1-15] gi|228674792|gb|EEL30025.1| Beta-lactamase domain protein [Bacillus cereus Rock1-15] Length = 244 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|229162002|ref|ZP_04289978.1| Metallo-beta-lactamase [Bacillus cereus R309803] gi|228621483|gb|EEK78333.1| Metallo-beta-lactamase [Bacillus cereus R309803] Length = 285 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ K AI +TH H DH G Sbjct: 45 GNPHTDDFVLVDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 96 IIELIKYWDVPVYAHQMEIPFL 117 >gi|256810849|ref|YP_003128218.1| ribonuclease Z [Methanocaldococcus fervens AG86] gi|256794049|gb|ACV24718.1| ribonuclease Z [Methanocaldococcus fervens AG86] Length = 314 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + DCG + + + F + IFITH H Sbjct: 15 KNRNHIGIAFKFGGEVFLFDCG-----------ENIQRQMLFTEVSPMKINKIFITHLHG 63 Query: 79 DHYGALHDLWSFLH-------VPVYASPFAIGLLEA--KRVYERVSKKIPCISFQAGDKV 129 DH + L + + ++ L+++ + + I + + Sbjct: 64 DHILGIPGLLQSMGFFGRNKEIEIFGPEGTKELIKSSLNLGFHCIEFPIKVYEICEKEPI 123 Query: 130 DV---GAFSIESVRVNHSIP 146 + + I + HS+P Sbjct: 124 TIYKEENYEIIAYPTKHSVP 143 >gi|189426391|ref|YP_001953568.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422650|gb|ACD97048.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 208 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 19/153 (12%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG +G+N + G + +++D P D+ VD + + + ++AI Sbjct: 8 VGALGVNCFVLGCEATGQG--VVVD-----PGDE---VDRILA---QVKQRGLTIVAIIN 54 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG------D 127 TH H DH G L P+Y LLE + S Q Sbjct: 55 THGHFDHVGGNRQLTQATGAPLYIHQADAPLLERVAKTAGMYGLPGENSPQPDRLLEDGM 114 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 +++ G ++ + L + + I Sbjct: 115 QIEFGTHRLQVIHTPGHTQGGCCLYLEAEGRLI 147 >gi|325954959|ref|YP_004238619.1| beta-lactamase [Weeksella virosa DSM 16922] gi|323437577|gb|ADX68041.1| beta-lactamase domain protein [Weeksella virosa DSM 16922] Length = 256 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 67/224 (29%), Gaps = 39/224 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYG 82 + + +++DC PD + + + +NL AI TH H DH Sbjct: 38 SFMVEKNETRVVVDC---------------SPDFRYQMLRENVQNLDAIVFTHEHNDHVL 82 Query: 83 AL----HDLWS-FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 + ++ +P+Y P + + + Y K P I + + F I Sbjct: 83 GIDDTRPLIFKAKRDLPIYGLPRVLNQIRVRFPYIFDGTKYPGIPQVEEHAIGLEPFYIN 142 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI---GNEGILAL 194 + + V+ + + + D K+ +TD SL E + L Sbjct: 143 DIHIQ------PVEVMHGGLSILGYIFDKKI------AYLTDVKSLPEKTLEKLENLDVL 190 Query: 195 MCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + + + I K T S + Sbjct: 191 VLSALRQENPHHA--HLLLADAIEITQKLQPKQTYFTHISVEMG 232 >gi|126282070|ref|XP_001365385.1| PREDICTED: similar to Cleavage and Polyadenylation specificity factor (CPSF) 100kD subunit isoform 2 [Monodelphis domestica] Length = 788 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|228953430|ref|ZP_04115475.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228806169|gb|EEM52743.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 281 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ + AI +TH H DH G Sbjct: 41 GNPHTDDFVLVDAGMPKCANEI---------ISVTEERFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 92 IIELIKYWDVPVYAHQMEIPFL 113 >gi|328910734|gb|AEB62330.1| hypothetical protein LL3_00785 [Bacillus amyloliquefaciens LL3] Length = 265 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 21/84 (25%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN-------LMAIF 72 N+ + + I++D G+ P+ I +E K L A+ Sbjct: 33 NVYFIE-NPSAPGEIILVDAGM--PQSA-----------EMITEEMKRRFGDGYQLKAVM 78 Query: 73 ITHAHEDHYGALHDLWSFLHVPVY 96 +TH H DH GA+ +L VPVY Sbjct: 79 LTHGHFDHVGAIEELLEMWDVPVY 102 >gi|322804695|emb|CBZ02247.1| come-like protein, Metallo beta-lactamase superfamily hydrolase, secreted [Clostridium botulinum H04402 065] Length = 287 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 77/246 (31%), Gaps = 43/246 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK-ERKNLMAIFITHAHEDHYGA 83 + K I+ID G D L I+++ K K L + TH HEDH G Sbjct: 53 SILVQTKDKNILIDAGTRKSSDSL---------ISYLKKQHIKKLDYVIATHPHEDHIGG 103 Query: 84 LHDLWSFLHV-PVYASPFAIG---------LLEAKRVYERVSKKIPCISFQAGDKVDV-G 132 + + + YA L+ K + V+KK + +D Sbjct: 104 MPKVIEEFEISNFYAPKKTANTKIFKDMILQLKKKNLKINVAKKGISVDLSNNSSLDFLA 163 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW-KLDDDAILGDVTDK----------- 180 N S + + + + TGD K + IL D Sbjct: 164 PVKDNYENTNDS---SAVVKLTHGNTKFLFTGDAEKTSEKDILNSNEDLSSNVLKVGHHG 220 Query: 181 ------DSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMK-NAKGCVLVTTF 233 N I + C N + K +KK ++ + + G +++T+ Sbjct: 221 SHSSSSKEFLDKINPKIAIISCGKNNDYGHPHKETMKELKKRNIEVYRTDIDGNIVLTSD 280 Query: 234 SSSVSR 239 ++ + Sbjct: 281 GENIKK 286 >gi|317490805|ref|ZP_07949241.1| hydroxyacylglutathione hydrolase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920352|gb|EFV41675.1| hydroxyacylglutathione hydrolase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 251 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 18/175 (10%), Positives = 49/175 (28%), Gaps = 25/175 (14%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 R+ +++D GV+ P + ++ + + AI +TH H DH G + ++ Sbjct: 21 QRECLIVDPGVA------------SPVLHYLTENKLTPKAILLTHHHNDHVGGVGEILQN 68 Query: 91 L-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + VY + ++++ ++ + + H I Sbjct: 69 YPDITVYGPQETV--------NHGCTQQVQGHDEITVLGLNFSVLDVPGHTLGH-IAYYA 119 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + + + + + + + C Sbjct: 120 MPYLFCGDTLFSAGCGRIFEGTPEQMYAS-LQLIAQLPDN--TLICCAHEYTESN 171 >gi|237736710|ref|ZP_04567191.1| Zn-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] gi|229420572|gb|EEO35619.1| Zn-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] Length = 259 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 17/155 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G N S I+ID G S + ++ I ++ Sbjct: 1 MKISILGSGS--GGNATYIE----SENGKILIDAGFS--------CKKIEERLSIIQRDI 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ I ITH H DH + +VP+Y +P + E+K Sbjct: 47 SDINGILITHEHIDHIQGAGIISRKYNVPIYITPESFKAGESKL---GKIAAENLRFIDN 103 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 + + ++ V H T+ I S G + Sbjct: 104 EKFIINDSLLVKPFDVMHDACRTVGYRIESQNGKV 138 >gi|228959339|ref|ZP_04121034.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228800409|gb|EEM47331.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 285 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 96 IIELIKYWDVPVYAHQMEIPFL 117 >gi|91203397|emb|CAJ71050.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 464 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 57/459 (12%), Positives = 130/459 (28%), Gaps = 95/459 (20%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMK 63 + +G + + + + ++IDCG +++ + D + Sbjct: 1 MNITFIGAARMVTGSC----FYIQTKEANLLIDCGFFQGSKENEEQNANSFSFDPSG--- 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR------VYERVSK 116 + + +THAH DH G + L + A+ + L Sbjct: 54 ----IHYLLLTHAHLDHSGLIPKLVKDGFKGKILATNATVELCRIMLMDSAYIQERDAEW 109 Query: 117 KIPCISF-------------------QAGDKVDVG-------AFSIESVRVNHSIPETMA 150 + ++ G + H I + Sbjct: 110 DNKKRGWAGKPLLTPLYTADEAADSLDYFQGIEYGTIEEIGNGIKVRFQDAGH-ILGSAI 168 Query: 151 LVIRSPVG-----NIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREG 205 + + +V +GD + ++ D T E + +ST A R Sbjct: 169 VELWVNEDASGEKKLVFSGDLGQKNIPVVNDPT--------PIEEGDYVFIESTYANRRH 220 Query: 206 TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-------GRKIVLLG 258 I+E ++ + ++ + ++ + +V R ++I+ + +++ ++ + Sbjct: 221 KGINETT-EELRQAVTESLERGGNISIPAFAVGRTQNILYLLKKLSIGGKLDHLRVFVDS 279 Query: 259 SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRG--- 315 R + ++ D+ L G + L + T + L ++ RG Sbjct: 280 PMAIRATRITLNHPECLDDET-LELIREGKFSGSNLSLEFTEAVEASME-LNKIKRGAII 337 Query: 316 -------------EMRNVKL-AEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDA 361 L + +VIF G I + Sbjct: 338 ISASGMCNAGRIRHHLKHNLWRPECSVIFVGFQAYG--TLGRKIVEGASMVKLFGEEIAV 395 Query: 362 ECPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGE 394 + ++ S H L +P+ + IHGE Sbjct: 396 KAKIYTIGGLSAHADQEGLMDWLNKFKRKPRRIFVIHGE 434 >gi|323481420|gb|ADX80859.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] Length = 208 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + KN AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKNPAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|229151299|ref|ZP_04279505.1| Metallo-beta-lactamase [Bacillus cereus m1550] gi|228632299|gb|EEK88922.1| Metallo-beta-lactamase [Bacillus cereus m1550] Length = 281 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ + AI +TH H DH G Sbjct: 41 GNPKTNDFVLVDAGMPKCANEI---------ISVTEERFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPF 100 + +L + VPVYA Sbjct: 92 IIELIKYWDVPVYAHQM 108 >gi|255550227|ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223544650|gb|EEF46166.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 737 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 112/343 (32%), Gaps = 41/343 (11%) Query: 55 FPDITFIMKERKNLMA----IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRV 110 P F + K L F+TH H DHY L SF H +Y S L+ K Sbjct: 410 IPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLT--RSFCHGKIYCSLITARLVNMKI- 466 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLD 169 K+ + + + NH P ++ ++ P ++HTGD++ Sbjct: 467 ---GIPWDRLQVLPLNKKISIAGVDVTCLDANH-CPGSIIVLFEPPNGKAVLHTGDFR-- 520 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNAKGCV 228 + S+ A+ I L+ D+T + E I+ I I + Sbjct: 521 ------FCENMASMTALQMCRIHTLILDTTYCNPQYDFPKQEAVIQFVIEAIQAESFNPK 574 Query: 229 LVTTFSS-SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFG 287 + S ++ + R +++A + RK+ + + + + S+ ++ L + Sbjct: 575 TLFLIGSYTIGKERLFLEVARVLRRKVYVTAAKFRLLESLGFSKEAMQWFTLNEHESQIH 634 Query: 288 LYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKN 347 + P S + Q + V + G + + G Sbjct: 635 VVPM-----WTLASFKRLKHISNQYASRFSPIVSFSPTGWTFGK-----GKKKSPGRRWQ 684 Query: 348 RLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390 + V S H +L+ +++ P+ ++ Sbjct: 685 QGTIIRYEVPY---------SEHCSFTELREFVKFVSPEKIIP 718 >gi|257057289|ref|YP_003135121.1| putative Zn-dependent hydrolase of beta-lactamase fold protein [Saccharomonospora viridis DSM 43017] gi|256587161|gb|ACU98294.1| predicted Zn-dependent hydrolase of beta-lactamase fold protein [Saccharomonospora viridis DSM 43017] Length = 315 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 27/137 (19%) Query: 31 SRKWIMIDCGVS-FPKDDLPGVDLVFPDITFIM------------KERKNLMAIFITHAH 77 K ++ID ++ FP + PD F+ + + I ITH H Sbjct: 59 DDKRVLIDPWLTRFP--------TIGPDGAFLESTPLTVDHAVVDQHIHGVDLILITHGH 110 Query: 78 EDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI 136 DH + + S V + I LL A + I + G+ + F++ Sbjct: 111 FDHIADVPYILSRFPDARVVGTETHIHLLTAM-----GVAERQVIWVRGGELLQFDGFTV 165 Query: 137 ESVRVNHSIPETMALVI 153 E V HS+ E + Sbjct: 166 EVVPSLHSLDENHRYLF 182 >gi|157415080|ref|YP_001482336.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386044|gb|ABV52359.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747722|gb|ADN90992.1| Metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni M1] gi|315932510|gb|EFV11447.1| metallo-beta-lactamase superfamily protein [Campylobacter jejuni subsp. jejuni 327] Length = 198 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 25/151 (16%) Query: 20 NMALY--GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 N + +G I+ID PG D + FI K KN +AI TH H Sbjct: 14 NCYILFSEHGE------IIID----------PGFDAL----NFIKKHVKNPLAILNTHGH 53 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + +P+Y +LE + + + +G + Sbjct: 54 YDHVWDNEKVKQAYQIPIYIHKNDAFMLEDPF-NQGFMPSKADYLIDDENIISIGGLDFK 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P I NI+ +GD+ Sbjct: 113 FHFLPGHTPGCTM--IEIVGKNIMFSGDFLF 141 >gi|316932337|ref|YP_004107319.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] gi|315600051|gb|ADU42586.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] Length = 244 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 66/196 (33%), Gaps = 33/196 (16%) Query: 4 EELVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDITFI 61 ++ F+ G +G G + + +IDCG S P G+ Sbjct: 1 MQVRFVGCGDALGSGGRLNTCFHVSGQTVN--FLIDCGATSMPALKRYGI---------- 48 Query: 62 MKERKNLMAIFITHAHEDHYGALHDL------WSFLHVPVYASPFAIG-----LLEAKRV 110 R++L I ITH H DH+G L L V A P I L+EA Sbjct: 49 --LREDLDLILITHFHGDHFGGLPFLMLDAKFLKRKRPLVIAGPPGIDIRLTRLMEAMFE 106 Query: 111 Y---ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV--IRSPVGNIVHTGD 165 + + S + ++ + G GA ++ V H + + + ++GD Sbjct: 107 HSSATKPSFDLQVLALEPGVTRQFGAVTVTPFPVVHGDSGGPFFAYRVEAEGRILAYSGD 166 Query: 166 WKL-DDDAILGDVTDK 180 + D D Sbjct: 167 TQWTDQLVAAAHDADL 182 >gi|297569676|ref|YP_003691020.1| RNA-metabolising metallo-beta-lactamase [Desulfurivibrio alkaliphilus AHT2] gi|296925591|gb|ADH86401.1| RNA-metabolising metallo-beta-lactamase [Desulfurivibrio alkaliphilus AHT2] Length = 479 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 65/508 (12%), Positives = 149/508 (29%), Gaps = 118/508 (23%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + G G + + L + + +++DCG+ K +F + R Sbjct: 1 MKITFFGAAGTVTGSQHLIE----VNGQRLLLDCGLFQGKRKE----------SFELNRR 46 Query: 66 -----KNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY-------- 111 ++L A+ ++HAH DH G + L + +P L + Sbjct: 47 GFCDARSLDALILSHAHIDHSGNIPCLVKNGFTGDIICTPATRDLCAIMLMDSAHIQEQD 106 Query: 112 ---------------ERVSKKIPCISFQAGDKVDVGA---------FSIESVRVNHSIPE 147 + + G + + + H + Sbjct: 107 VQFVNKQRAKNGQHLFEPLYEKEDVVRAMGQFIGISPKRQKEILPGIYLTFTEAGH-MLG 165 Query: 148 TMALVIRSP----------------VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + +V+ ++ +GD + + D L G Sbjct: 166 SANVVLDIYEDGAGDNGGEKEGRGRHRRLIFSGDIGR---PGIPIIRDPAQLSE----GA 218 Query: 192 LALMCDSTNAMREG--TCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 L+ +ST R SE+ +++ + + + GC+L+ F+ V R + ++ + Sbjct: 219 DILIMESTYGHRSHQPYPDSERELERIVNETYQRG-GCLLIPAFA--VGRTQQLVYALHK 275 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 + + + + V + D L E++ R+ ++ + + Sbjct: 276 LYLDNAIP----EVPIYVDSPLATRATDIYRLHPEAYDREIRDFILKGNHDNPFGFDTLR 331 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECP----- 364 S G+ + + +K VI S+ + + H++NR+ + ++ + P Sbjct: 332 YTQSVGDSKQLNALKKPAVIISASGMMEGGRILHHLRNRVSDPRNTILVTGWQAPNTLGR 391 Query: 365 -------------------------VHVSGHPYPNDLKRMYQWI--RPQVLVAIHGEPL- 396 SGH L + +P +HGE Sbjct: 392 KIVEGQETVKVFGEEFPLQAKVEQLTGFSGHADREGLLAWAGAMEKKPSHTFLVHGEAEA 451 Query: 397 HLVAHKELALQEGIACVPPVRNGKMLRL 424 L + G + + + + Sbjct: 452 TQALASALQEELGFSNIEIPELYQEFDI 479 >gi|119357569|ref|YP_912213.1| beta-lactamase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354918|gb|ABL65789.1| beta-lactamase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 465 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 60/490 (12%), Positives = 123/490 (25%), Gaps = 97/490 (19%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 EL F G + + + + + I++DCG+ D ++ Sbjct: 1 MELEFY--GATERVTGSCHIIR----TKQATILLDCGLIQGSSDEEQLNRAAFPFD---- 50 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK 116 ++ + ++H H DH G L L +Y + L A Sbjct: 51 -PASIDVVVLSHGHIDHSGRLPLLVQRGFSGSIYTHEATLDLCRVLLLDSASLAERDAEY 109 Query: 117 KIPCISFQAGDKVDVGAFSIESVRV-------------------------NHSIPETMAL 151 + + + E +R I + + Sbjct: 110 QRKHPVTRQDKHAEPLYTRKEVLRTLDRMVGIPYHRQAEIVRGITLRLSDAGHILGSSLI 169 Query: 152 VIRSPV----GNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 + +V +GD +L D +++ ++ +ST R Sbjct: 170 ELWIRDEGYERKLVFSGDLGQYASPVLQ---DPETIEE-----ADLVIVESTYGDRLHRD 221 Query: 208 ISEK--GIKKNIYDIMKNAKGCVL----------------VTTFSSSVSRIRSIIDIAEQ 249 E + I + ++ + + R + +D Sbjct: 222 FEETALELGTIIRSACRGCGNILIPAFAIGRSQELLYLFALNYKEWQLDRWQIFLDSPMA 281 Query: 250 ---------IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATG 300 + + + +G + + + +IA Sbjct: 282 IEASQIYWDYPELVDVDARDFREHPEKLPPLGNLHFTPKPEQSRAINSLKSGAV-IIAGS 340 Query: 301 SQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAED 360 L L + R+ + VI + G + + E + Sbjct: 341 GMCNGGRILHHLKQNIHRH-----ECKVIITGYQAEG--TLGRKLVDGDKEVSIHGRNYA 393 Query: 361 AECPVHV----SGHPYPNDLKRMYQWI--RPQVLVAIHGEPLHLVAHKELALQEGIACVP 414 VH S H D+ R RP+V V +HG+ K + V Sbjct: 394 VAATVHTVGGLSAHGDQEDMLRWLGGFRSRPKVFV-VHGDGDVKKVFKAKIEERFDLNVT 452 Query: 415 PVRNGKMLRL 424 +G + L Sbjct: 453 IPESGSCVNL 462 >gi|86150149|ref|ZP_01068376.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597612|ref|ZP_01100846.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562437|ref|YP_002344216.1| putative hydrolase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|50540934|gb|AAT77953.1| putative glyoxalase II [Campylobacter jejuni] gi|85839265|gb|EAQ56527.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190204|gb|EAQ94179.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360143|emb|CAL34937.1| putative hydrolase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926055|gb|ADC28407.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928260|gb|EFV07576.1| metallo-beta-lactamase superfamily protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929366|gb|EFV08572.1| metallo-beta-lactamase superfamily protein [Campylobacter jejuni subsp. jejuni 305] Length = 198 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 21 MALYG---YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 +Y Y + + +ID PG D + FI K KN +AI TH H Sbjct: 8 CGVYETNCYILFTPKGEFIID----------PGTDALL----FIKKHVKNPLAILNTHGH 53 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + ++P+Y +L + D +++ + Sbjct: 54 YDHIWDNAKVKKEYNIPIYIHKNDAFMLHDDF-NQGYDSSDADFLVDNEDILNICGVDFK 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P I NI+ +GD+ Sbjct: 113 FHFLPGHTPGCTM--IEIVGKNIMFSGDFLF 141 >gi|160941983|ref|ZP_02089304.1| hypothetical protein CLOBOL_06875 [Clostridium bolteae ATCC BAA-613] gi|158435110|gb|EDP12877.1| hypothetical protein CLOBOL_06875 [Clostridium bolteae ATCC BAA-613] Length = 286 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%) Query: 16 EIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF-IMKERKNLMAIFIT 74 EI +Y Y + ++D GV G D + I K R+N+ A+ +T Sbjct: 19 EITR--YVYVYIITGKKGCYLVDAGVK-------GCDKKIEEYIHKIGKNRENINAVLLT 69 Query: 75 HAHEDHYGALHDLWSFLHVPVYASP 99 H+H DH GAL + VYAS Sbjct: 70 HSHPDHIGALKTIKEMYSCCVYASR 94 >gi|332704315|ref|ZP_08424403.1| flavodoxin/nitric oxide synthase [Desulfovibrio africanus str. Walvis Bay] gi|332554464|gb|EGJ51508.1| flavodoxin/nitric oxide synthase [Desulfovibrio africanus str. Walvis Bay] Length = 396 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 17/135 (12%) Query: 57 DITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVS 115 D+ ++ + + A+ + HA DH GAL +L S + VP+Y S +++ Y Sbjct: 62 DLERLVD-LQKIDAVVVNHAEVDHSGALPELLSRIPDVPLYCSK---NAVKSLTGYYH-- 115 Query: 116 KKIPCISFQAGDKVDVGAFSIESV--RVNHSIPETMALV-------IRSPVGNIVHTGDW 166 K + GDK +G + + + H P++M + + ++ Sbjct: 116 KDWNFQVVRTGDKFSLGNMDLVFIEAPMLHW-PDSMFCYLTEANVLFSNDAFGQHYASEF 174 Query: 167 KLDDDAILGDVTDKD 181 DD ++ D+ Sbjct: 175 MYDDLVDPCELFDEA 189 >gi|312114824|ref|YP_004012420.1| RNA procession exonuclease-like protein [Rhodomicrobium vannielii ATCC 17100] gi|311219953|gb|ADP71321.1| RNA procession exonuclease-like protein [Rhodomicrobium vannielii ATCC 17100] Length = 336 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 79/238 (33%), Gaps = 30/238 (12%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 F + + + A +TH H DH H V A+P + ++ + Sbjct: 22 FFIDPVRPVDAAIVTHGHSDH-------ARSGHAKVAATPDTLAIMACR---YGEGFACQ 71 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDV 177 + + G + H I ++I +V +GD+K D A ++ Sbjct: 72 RVDLPYRQPIHWGEARVTLYPAGH-ILGAAQVLIEHGGARLVVSGDYKRTADPTARPFEL 130 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMRE-GTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + ++T + ++ ++K + + + C + ++ Sbjct: 131 V-----------PCDVFVTEATFGLPVFCHPDPQREVEKLLNSLAIFPQSCHAIGCYA-- 177 Query: 237 VSRIRSIIDIAEQIG--RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 + + + +I + G R I L G +L ++ + G+ ++ + E Sbjct: 178 LGKTQRLIAELRRAGYDRPIYLHG-ALMKLTELYEARGVALGPYEPVTPANRKALAGE 234 >gi|89895195|ref|YP_518682.1| hypothetical protein DSY2449 [Desulfitobacterium hafniense Y51] gi|219669625|ref|YP_002460060.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|89334643|dbj|BAE84238.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539885|gb|ACL21624.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 205 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 19/144 (13%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 VG +G N L P ++K +ID P + PG+ ++ + + I + Sbjct: 7 VGAMGANCYLVSC--PETKKAALID-----PGANGPGIQ------EWVDERGVQVEYILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLE------AKRVYERVSKKIPCISFQAGD 127 TH H DH GA+ L V +L ++ + K + G Sbjct: 54 THGHFDHIGAVDKLRELYQAKVGIHKEDAVMLTSGAHNLSRMLGRSYEFKPADFLLEDGQ 113 Query: 128 KVDVGAFSIESVRVNHSIPETMAL 151 + VG ++ + + Sbjct: 114 ILQVGNLNLTVIATPGHTLGGVCF 137 >gi|184156713|ref|YP_001845052.1| Zn-dependent hydrolase [Acinetobacter baumannii ACICU] gi|332873123|ref|ZP_08441080.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6014059] gi|183208307|gb|ACC55705.1| Zn-dependent hydrolase, including glyoxylase [Acinetobacter baumannii ACICU] gi|322506602|gb|ADX02056.1| Zn-dependent hydrolase, including glyoxylase [Acinetobacter baumannii 1656-2] gi|323516479|gb|ADX90860.1| Zn-dependent hydrolase, including glyoxylase [Acinetobacter baumannii TCDC-AB0715] gi|332738635|gb|EGJ69505.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6014059] Length = 214 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P + + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPGHVMFY--NKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|169634509|ref|YP_001708245.1| putative enzyme [Acinetobacter baumannii SDF] gi|215484803|ref|YP_002327038.1| Metallo-beta-lactamase superfamily protein [Acinetobacter baumannii AB307-0294] gi|260556256|ref|ZP_05828475.1| metallo-beta-lactamase superfamily protein [Acinetobacter baumannii ATCC 19606] gi|332851880|ref|ZP_08433783.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6013150] gi|332867938|ref|ZP_08437926.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6013113] gi|169153301|emb|CAP02407.1| putative enzyme [Acinetobacter baumannii] gi|193076219|gb|ABO10842.2| hypothetical protein A1S_0383 [Acinetobacter baumannii ATCC 17978] gi|213987918|gb|ACJ58217.1| Metallo-beta-lactamase superfamily protein [Acinetobacter baumannii AB307-0294] gi|260410311|gb|EEX03610.1| metallo-beta-lactamase superfamily protein [Acinetobacter baumannii ATCC 19606] gi|332729665|gb|EGJ61001.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6013150] gi|332733639|gb|EGJ64798.1| metallo-beta-lactamase domain protein [Acinetobacter baumannii 6013113] Length = 214 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P + + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPGHVMFY--NKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|167747756|ref|ZP_02419883.1| hypothetical protein ANACAC_02477 [Anaerostipes caccae DSM 14662] gi|167653118|gb|EDR97247.1| hypothetical protein ANACAC_02477 [Anaerostipes caccae DSM 14662] Length = 295 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 55/209 (26%), Gaps = 36/209 (17%) Query: 17 IGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK---ERKNLMAIFI 73 +G + +M D G G V I I + ++ I + Sbjct: 56 VGGSWVCVHIVDTGEG-LLMFDAG-------NCGAQAVL--IQSIWEMGFNPADVKWIIL 105 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA-----KRVYERVSKKIPCISF---QA 125 +H H DH+GA++ + +Y + + + Sbjct: 106 SHGHVDHFGAVNFFKNMFGTKIYMGEPDVKMFREHPELTMIQESGNCMDTLFHVDVAVKE 165 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN------IVHTGDWKLDDDAILGDVTD 179 GD G ++E V + G + L ++ D Sbjct: 166 GDIRTFGNTTVEFYLVPGHTKGCIVCFFDITDGKERKRAGYYGGFGFNTLQSDYLNEIGD 225 Query: 180 ---------KDSLCAIGNEGILALMCDST 199 SL + N+ + M + T Sbjct: 226 SGFQARKDYLHSLEKVRNQKVDLFMGNHT 254 >gi|315649092|ref|ZP_07902185.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315275527|gb|EFU38882.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 261 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 47/244 (19%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALH 85 MIDCG PD F+M+ ++ + + ITHAH DH G L Sbjct: 47 VECGEASFMIDCG---------------PDWRFMMEGLGKRKMRDMLITHAHFDHIGGLP 91 Query: 86 -------DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 L +YA +LE + ++ D + +G + I Sbjct: 92 EWSDACRWLGEKGR--LYAP---ADVLEQIVRQYPWLPRQMEMT-AVDDGITLGGWEISC 145 Query: 139 VRVNHSIPE-TMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 +VNH + A ++ V+ D + +G+ L+ Sbjct: 146 WKVNHGKNGYSYAYRLQKGEYTWVYNSD-----------SINLSPAEKEPLKGLDLLVLG 194 Query: 198 STNAMREGTCISEK--GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIV 255 ++ S +K+ + + + T S V ++ G + Sbjct: 195 TSFVHETAIFESRSVYDMKEAAQLLSEVNPRQTIYTHMSHDV---DVRKELPLSEGVSVA 251 Query: 256 LLGS 259 + G Sbjct: 252 MTGM 255 >gi|239500884|ref|ZP_04660194.1| Zn-dependent hydrolase, including glyoxylase [Acinetobacter baumannii AB900] Length = 214 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P + + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPGHVMFY--NKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|160933807|ref|ZP_02081195.1| hypothetical protein CLOLEP_02668 [Clostridium leptum DSM 753] gi|156867684|gb|EDO61056.1| hypothetical protein CLOLEP_02668 [Clostridium leptum DSM 753] Length = 264 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 12/137 (8%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y + I++D G + + G L DI ++ AIF+TH H DH L Sbjct: 15 SYYIGTGEHGILVDAGRT--AKQMEGA-LSANDI-----NISSVRAIFVTHEHTDHVKGL 66 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 L S H+ VY+S + L + +S K PC + G I +H Sbjct: 67 RVLASRHHIKVYSSMGTLEALNDM---QILSGKFPCDVISENGIQEAG-MEIRPFHTSHD 122 Query: 145 IPETMALVIRSPVGNIV 161 E++ I P G +V Sbjct: 123 SAESVGYRISLPNGRVV 139 >gi|49477996|ref|YP_037194.1| metal-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329552|gb|AAT60198.1| metal-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 285 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 + +L + VPVYA I L ++ Y + + F E + + + Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDSTVEGGMIAKMSPL----FPNEPIDLGN 151 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDA 172 SI + G + H D++ Sbjct: 152 SI------KVLPTDGTVPHMPDFRWIHTP 174 >gi|116620959|ref|YP_823115.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224121|gb|ABJ82830.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 261 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 23/206 (11%) Query: 41 VSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGAL----HD-LWSFLHV 93 VSF ++ +D PD+ + + L A+ TH+H DH L + Sbjct: 45 VSFDDRNVL-IDT-TPDLRTQALRARIERLDAVLFTHSHADHLMGLDDVRPFNFRQKGQI 102 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALV 152 P++ASP + ++ Y + K + +V G F + IP Sbjct: 103 PIFASPETMAAVQRCFQYIFDNGKKESNVPKLDARVLDGTPFDV-FGMEFTPIP------ 155 Query: 153 IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG 212 ++ + +TD + E + L +A+R + Sbjct: 156 -ILHGSQTIYGFRFG-----GAAYLTDHSDIPESSMEMLKGLDVLFLDALRYKPHPTHST 209 Query: 213 IKKNIYDIMKNAKGCVLVTTFSSSVS 238 ++++I + + A T + Sbjct: 210 VERSIRTVDQLAPHRAFFTHICHDLG 235 >gi|331228701|ref|XP_003327017.1| DNA cross-link repair protein pso2/snm1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306007|gb|EFP82598.1| DNA cross-link repair protein pso2/snm1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 812 Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 25/286 (8%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + A F++HAH DHY L W +Y S L++ K + + Sbjct: 277 VSAYFLSHAHSDHYTKLSSSWKH--GKIYCSKTTANLVKLKLRVDSHW----IVPLDFNT 330 Query: 128 KVDVGAFSIESVRVNHSIPETMALVI------RSPVGNIVHTGDWKLDDDAILGDVTDKD 181 V + + NH P + + +H GD++ + Sbjct: 331 PYTVDDVRVVLIDANH-CPGSAMFLFEGITKPDRKPFRYLHCGDFRATPAQLRHP----- 384 Query: 182 SLCAIGNEGILALMCDSTNAM-REGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSR 239 AI + I D+T + ++ I+ I T S + Sbjct: 385 ---AIHEKVIDICYLDTTYLDPKYSFPAQDQVIQGCCKAIGARVLDDDHTATMSSKDIKT 441 Query: 240 IRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIAT 299 ++ I + K L S + + + ++ S + +L I Sbjct: 442 LQDIGR--SRAVLKSWLQPHSASSSSTTLGPLPKKEGVPEQVAGASGEEPKQPKLASITE 499 Query: 300 GSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHI 345 G P + + ++ ++I G E + + Sbjct: 500 GMNPPPSPIYDSQFEPKDQTSTNEKRKSLILIGTYSIGKERIVIEV 545 >gi|254725527|ref|ZP_05187309.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] Length = 244 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHRVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|225848337|ref|YP_002728500.1| metallo-beta-lactamase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644580|gb|ACN99630.1| putative metallo-beta-lactamase domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 212 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 26/154 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L +G + E N + ++ ++ID PG D + + Sbjct: 3 VKVLTVGPLAE---NCVVI--YDEKTKDCVIID----------PGADGE----DILEEVE 43 Query: 66 K-NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVYERVSKKI 118 N+ AI TH H DH G + L L VP Y + L+ + + Sbjct: 44 HFNVKAILATHGHLDHVGQVGFLKKILDVPFYMNVKDEFLINNDIFPGFSMIIKATKCPN 103 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 P + GD + G+ S + P ++ Sbjct: 104 PDFDLKEGDNLKFGSISFYVIETPGHTPGSVCFY 137 >gi|257451948|ref|ZP_05617247.1| metallo-beta-lactamase family protein [Fusobacterium sp. 3_1_5R] gi|257467247|ref|ZP_05631558.1| metallo-beta-lactamase family protein [Fusobacterium gonidiaformans ATCC 25563] gi|315918375|ref|ZP_07914615.1| metallo-beta-lactamase [Fusobacterium gonidiaformans ATCC 25563] gi|317058498|ref|ZP_07922983.1| metallo-beta-lactamase [Fusobacterium sp. 3_1_5R] gi|313684174|gb|EFS21009.1| metallo-beta-lactamase [Fusobacterium sp. 3_1_5R] gi|313692250|gb|EFS29085.1| metallo-beta-lactamase [Fusobacterium gonidiaformans ATCC 25563] Length = 200 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 25/174 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + K ++ID G S P+ ++ + T + AI +TH H D Sbjct: 15 NCYVL----IQEGKSVIIDPGFS-PEI----IEDMIAGTTPL--------AILLTHGHLD 57 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRV--YERVSKKIPCISFQAGDKVDVGAFSIE 137 H A+ L H+P+Y S +L+ + + FS E Sbjct: 58 HVNAVKALHQKYHLPIYMSKKEDAILKLTTSVPEGYHRDFEAEYFDLQEGDLQIENFSFE 117 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNE 189 + ++ + N + TGD +D + + Sbjct: 118 IIATPGHTEGSLCI----RCENHLFTGDTLFRGTIGRTDIFSSDPKKMKESIQK 167 >gi|253990244|ref|YP_003041600.1| hypothetical protein PAU_02767 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781694|emb|CAQ84857.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 215 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + + + ++D G + I I L I +TH H D Sbjct: 14 NCTLI--WNEETNEAAIVDPG---GEAAKL--------IAEIENRGLKLTQILLTHGHFD 60 Query: 80 HYGALHDLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVG 132 H GA ++ +VPVY F I L+A+ + + + GD++ VG Sbjct: 61 HVGATAEVAKHFNVPVYGPQQEDAFWIEGLQAQSRMFGIEECPSFEPDRWLNEGDELRVG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + P +V + +++ GD Sbjct: 121 GIDLSVLHCPGHTPG--HVVFVNHADKLIYMGDVLF 154 >gi|229080283|ref|ZP_04212809.1| Metallo-beta-lactamase [Bacillus cereus Rock4-2] gi|228703035|gb|EEL55495.1| Metallo-beta-lactamase [Bacillus cereus Rock4-2] Length = 285 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ + AI +TH H DH G Sbjct: 45 GNPHTDDFVLVDAGMPKCANEI---------ISVTEERFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 96 IIELIKYWDVPVYAHQMEIPFL 117 >gi|241518522|ref|YP_002979150.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862935|gb|ACS60599.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 294 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Query: 22 ALYGYGSPSS-RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH 80 + +G P+ W++ID G+ P V+ AI +THAH DH Sbjct: 38 NVIFHGDPAKGNDWVLIDTGL--PTSKNTIVETAEARFG----RNTRPSAIVMTHAHFDH 91 Query: 81 YGALHDLWSFLHVPVYASPF 100 G+L L VPVYA P Sbjct: 92 AGSLEGLAEHWDVPVYAHPL 111 >gi|310779429|ref|YP_003967762.1| metallo-beta-lactamase [Ilyobacter polytropus DSM 2926] gi|309748752|gb|ADO83414.1| metallo-beta-lactamase [Ilyobacter polytropus DSM 2926] Length = 291 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 67/208 (32%), Gaps = 19/208 (9%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 ++++ + +S I+ID + D + + + + + + I I+H H Sbjct: 58 GSVSVVAWVLKTSDGIILIDS--MWDDHD---AETIINGMESLGLDPSEIKYILISHGHG 112 Query: 79 DHYGALHDLWSFLHVPVYASPFAIGLLEAKR---VYERVSKKIPCISFQAGDKVDVGAFS 135 DHYG + L V + + + R K I + GD++ +G + Sbjct: 113 DHYGGANYLRDKFGAKVVMTKVDAEFMYSLTTGPNSSRSPKPPVDIYVKNGDEITLGDKT 172 Query: 136 IESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA---IGNEGIL 192 ++ + P ++ I H + + A+L T + Sbjct: 173 VKILETPGHTPGGISF--------IFHIVNDGKEHTAVLWGGTGIPRNAKEKLTYKTSVT 224 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDI 220 +S A + + ++ Sbjct: 225 HFEKESKEAGATIELTAHLFVGDGFKNL 252 >gi|300710007|ref|YP_003735821.1| hypothetical protein HacjB3_03180 [Halalkalicoccus jeotgali B3] gi|299123690|gb|ADJ14029.1| hypothetical protein HacjB3_03180 [Halalkalicoccus jeotgali B3] Length = 247 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 66/199 (33%), Gaps = 39/199 (19%) Query: 5 ELVFLPLG-----GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDI 58 E+ F LG G G G + +PS R +IDCG S GVD Sbjct: 3 EISFTFLGSGDPLGSG--GRLQTCFHVAAPSGR--FLIDCGATSMAAMKREGVD------ 52 Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLW-------SFLHVPVYASPFAIG--LLEAK- 108 R + AIFITH H DH G L V A P + L A Sbjct: 53 ------RNAIEAIFITHLHGDHIGGLPYFVLDAQLIAERTEPLVIAGPPGLEERLRAAMD 106 Query: 109 -----RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE-TMALVIRSPVGNIVH 162 + ++ + +A K +G + V H+ AL + + + Sbjct: 107 VSFPGLSGVKQRFELQIVELEADRKTAIGPVDVTPTEVVHACGAPPYALRLDIDGKTLAY 166 Query: 163 TGDWKL-DDDAILGDVTDK 180 +GD + D + D Sbjct: 167 SGDTEWTDALFEVARGADL 185 >gi|118473438|ref|YP_885181.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|4874247|gb|AAD31327.1| beta-lactamase-like protein [Mycobacterium smegmatis str. MC2 155] gi|118174725|gb|ABK75621.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 248 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++ID G FP + V + + ++ A+ +THAH DH+G L Sbjct: 25 VTGDDGVLLIDAG--FPGQR----EDVLDSVRQLGFGPDDIKAVLLTHAHVDHFGTAIWL 78 Query: 88 WSFLHVPVYASP 99 PVY Sbjct: 79 AKTYGTPVYCHA 90 >gi|196230462|ref|ZP_03129324.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196225392|gb|EDY19900.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 259 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 26/194 (13%) Query: 56 PDIT--FIMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFAIGLLEAKR 109 PD + + + + A+ TH+H DH L + +PVYASP + LE Sbjct: 56 PDFRTQALRERVRRIDAVVFTHSHTDHIMGLDDLRPFCFGEKELPVYASPETMRDLERVF 115 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFS-----IESVRVNHSIPETMALVIRSPVGNIV-HT 163 V+ + + V G F I ++V H ++R ++ + Sbjct: 116 VFAFNGQNRWPGYLRPMPYVINGPFRLGSTEITPLQVLHGRTPVNGYLLRRNGEPLLAYL 175 Query: 164 GDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN 223 D K A G+ L+ D A+R + I++ + Sbjct: 176 SDCKEVPAA-----------AREAVRGVRHLVVD---ALRYTPHPTHMNIEEALALAQDV 221 Query: 224 AKGCVLVTTFSSSV 237 G T V Sbjct: 222 CPGKTWFTHLCHDV 235 >gi|324327061|gb|ADY22321.1| metal-dependent hydrolase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 285 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G P + +I++D G+ +++ I+ K AI +TH H DH G Sbjct: 45 GHPHTNDFILVDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + +PVYA I L Sbjct: 96 IIELIKYWDIPVYAHQMEIPFL 117 >gi|313886573|ref|ZP_07820287.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923983|gb|EFR34778.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] Length = 523 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 80/237 (33%), Gaps = 42/237 (17%) Query: 32 RKWIMIDCGVSFPKDDLP-GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS- 89 K I+IDC F + L G+D L AI +TH H DH G L DL + Sbjct: 55 GKRILIDCSADFRQQALLAGIDH--------------LDAIILTHQHYDHIGGLDDLRTI 100 Query: 90 --FLHVPVYASPFAIGLLEAKRVYERVSKKIPC------ISFQAGDKVDVGAFSIESVRV 141 +P+YA P + ++++ Y + P + + + +IE +RV Sbjct: 101 SWRTELPIYAEPNVLEAIKSRLHYYFGPHRYPGTPHLTLHPISSLEPFTLYDLTIEPIRV 160 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 H + I S + D +I + + L G+ L + Sbjct: 161 MHGKQPILGYRIGSFG--------FLTDLKSIAPEE--LEKLQ-----GVELLFVNGLRY 205 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG 258 + + + I++ I + + S + + + G + G Sbjct: 206 TKPH--PTHQTIEEAIELTARVQPQRSYIIHLSHHAPPTAELQERLPK-GVYVGYDG 259 >gi|237799026|ref|ZP_04587487.1| hypothetical protein POR16_09352 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021880|gb|EGI01937.1| hypothetical protein POR16_09352 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 480 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 105/377 (27%), Gaps = 59/377 (15%) Query: 37 IDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-LHVPV 95 IDCG ++ V+ D +++ A+ +TH H DH G + +L + P+ Sbjct: 32 IDCGSVQGREGR--VESASFDFD-----PESIRALLVTHVHNDHVGRIPELLAAGYTGPI 84 Query: 96 YASPFAIGLL------EAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH------ 143 S + +L K + + +V F ++H Sbjct: 85 LCSEPSAHMLPLVMEDTLKIAFAHDPAQAERHLETINKRVIALPFDNWFSLIDHESLHCK 144 Query: 144 -------SIPETMALV------IRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 I + + + +V +GD L E Sbjct: 145 VRLQRAGHILGSAYVECDLHYPLEGRSIRVVFSGDLGASHTPFLP--------APKPPER 196 Query: 191 ILALMCDSTNAMREGTCISEKGIK-KNIYDIMKNAKGCVLVTTFSSSVSRIRSI---IDI 246 L+ +ST R S + + I D G VL+ FS + R + + ++ Sbjct: 197 ADILVLESTYGDRLHEDRSTRQQGLERIIDKALEDNGTVLIPAFS--IGRTQELLYELED 254 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLS---------DESFGLYPREQLIVI 297 + + G R+ I G + + L + + Sbjct: 255 ILRRKMLLSQAGEGSARLDGDDILPGDWSRLPVILDSPLASRFTKLYQSFEDYWDNDARL 314 Query: 298 ATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFS--SRAIPGNEV-AIGHIKNRLVEQGV 354 +G+ +P + + + I GN + A G I N L Sbjct: 315 RSGAGRKPLGFDQLIGIDTHEQHLRTVNYLASTARPAIVIAGNGMCAGGRIVNYLKAMLG 374 Query: 355 RVIAEDAECPVHVSGHP 371 G P Sbjct: 375 DRRHNVVFVGYQGKGTP 391 >gi|206968856|ref|ZP_03229811.1| metal-dependent hydrolase [Bacillus cereus AH1134] gi|229179393|ref|ZP_04306747.1| Metallo-beta-lactamase [Bacillus cereus 172560W] gi|206735897|gb|EDZ53055.1| metal-dependent hydrolase [Bacillus cereus AH1134] gi|228604291|gb|EEK61758.1| Metallo-beta-lactamase [Bacillus cereus 172560W] Length = 281 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 26/153 (16%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 41 GNPKTNDFVLVDAGMPKCANEI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G S++ Sbjct: 92 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-SVK 150 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ + ++P P +HT Sbjct: 151 ALPTDGTVP-------HMPEFRWIHTSGHTPGH 176 >gi|295105676|emb|CBL03220.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Faecalibacterium prausnitzii SL3/3] Length = 262 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 +++++D G GV + + + I +TH H DH L Sbjct: 23 QYLIVDMG--------KGVRTTTAALKSLGLAVSDCAGILVTHEHSDHVKGLSTFLKKNP 74 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +PVY + + L+A + ++ G + D+G F ++S +H +P + Sbjct: 75 MPVYGAAATLDFLDA----NDIVPANCELNTLEGREEDIGCFGVQSFPTSHDVP-CVGYR 129 Query: 153 IRSPVGNIV 161 I +P + Sbjct: 130 IHTPDDKTM 138 >gi|160945069|ref|ZP_02092295.1| hypothetical protein FAEPRAM212_02587 [Faecalibacterium prausnitzii M21/2] gi|158442800|gb|EDP19805.1| hypothetical protein FAEPRAM212_02587 [Faecalibacterium prausnitzii M21/2] Length = 262 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%) Query: 33 KWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH 92 +++++D G GV + + + I +TH H DH L Sbjct: 23 QYLIVDMG--------KGVRTTTAALKSLGLAVSDCAGILVTHEHSDHVKGLSTFLKKNP 74 Query: 93 VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV 152 +PVY + + L+A + ++ G + D+G F ++S +H +P + Sbjct: 75 MPVYGAAATLDFLDA----NDIVPANCELNTLEGREEDIGCFGVQSFPTSHDVP-CVGYR 129 Query: 153 IRSPVGNIV 161 I +P + Sbjct: 130 IHTPDDKTM 138 >gi|255522436|ref|ZP_05389673.1| hypothetical protein LmonocFSL_14687 [Listeria monocytogenes FSL J1-175] Length = 50 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGV 51 PLGGV E G N+ + ++D G+ FP+++L G+ Sbjct: 13 PLGGVDESGKNLYVVEI----DEDIFILDAGLMFPENELLGI 50 >gi|229173751|ref|ZP_04301293.1| Metallo-beta-lactamase [Bacillus cereus MM3] gi|228609850|gb|EEK67130.1| Metallo-beta-lactamase [Bacillus cereus MM3] Length = 285 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ K AI +TH H DH G Sbjct: 45 GNPHTNDFVLVDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G S++ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-SVK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 ++ + ++P I +P H ++ Sbjct: 155 ALPTDGTVPHMPEFRWIHTPGHTPGHISLFR 185 >gi|313125758|ref|YP_004036028.1| metal-dependent hydrolase, beta-lactamase superfamily i [Halogeometricum borinquense DSM 11551] gi|312292123|gb|ADQ66583.1| metal-dependent hydrolase, beta-lactamase superfamily I [Halogeometricum borinquense DSM 11551] Length = 252 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 15/165 (9%) Query: 68 LMAIFITHAHEDHYGALHDL---WSFLHVPVYASPFAIGLLEAKRVYER--VSKKIPCIS 122 + A F+TH H DH G + DL FL +P+Y + + + E+ ++ + + Sbjct: 64 VDAAFVTHWHHDHVGGIDDLALTARFLDIPLYLTA-TA---QDRFAQEKPYLTDSVAIRN 119 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSP--VGNIVHTGDWK---LD-DDAILGD 176 G+ V VG I + V H PE L R +V+ D++ D + Sbjct: 120 LMHGEPVTVGDIEITPIPVAHDRPECDTLAFRLETGTETMVYAPDFENWCPDMPGGKMYT 179 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 D L A L D + + + ++ + M Sbjct: 180 NADLAVLEATPAIAPELLSSDVPTPDPVTKAAASRTVLTHLNEYM 224 >gi|170748845|ref|YP_001755105.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655367|gb|ACB24422.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 300 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 6/78 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G R W++ID GV K + AI +TH H D Sbjct: 42 NVVFVGAPGAGDRGWVLIDAGVMGAKRG------IQAAARARFGAGARPAAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYA 97 H G L DL VPVYA Sbjct: 96 HVGVLEDLAEEWDVPVYA 113 >gi|169338048|ref|ZP_02863185.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] gi|169295238|gb|EDS77371.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] Length = 116 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 25 GYGSPSSRKWIMIDCGVSFP-KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGA 83 + ++K I++DCG+ + + G D D K + + ++HAH DH G Sbjct: 16 CHIMRFNKKTILLDCGLFQGKDEKIRGNDEFPFDP-------KKIDYVILSHAHIDHSGR 68 Query: 84 LHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKKIP 119 + L+ V + L ++ Sbjct: 69 IPLLYKKGFKGEVICTRATKELCNIMLPDSGYIQETE 105 >gi|21673433|ref|NP_661498.1| metallo-beta-lactamase superfamily protein [Chlorobium tepidum TLS] gi|21646534|gb|AAM71840.1| metallo-beta-lactamase superfamily protein [Chlorobium tepidum TLS] Length = 469 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 12/109 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ F G + + + + +++DCG+ + V+ + + Sbjct: 1 MEIEFY--GATRRVTGSCHILRAAGYT----VLLDCGLVQGSRE---VEAL--NREPFPF 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 E + A+ ++H H DH G L L + P+Y I L E Sbjct: 50 EPSEIDAVVLSHGHIDHSGRLPLLVNRGFRGPIYTHHGTIELCEILLRD 98 >gi|299771735|ref|YP_003733761.1| Metallo-beta-lactamase superfamily protein [Acinetobacter sp. DR1] gi|298701823|gb|ADI92388.1| Metallo-beta-lactamase superfamily protein [Acinetobacter sp. DR1] Length = 214 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAKEWSVPVIGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P ++ + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPG--HVIFYNKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|189467076|ref|ZP_03015861.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] gi|189435340|gb|EDV04325.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] Length = 215 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 69/218 (31%), Gaps = 38/218 (17%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I+IDCG F + L + + + ITH H DH G L DL Sbjct: 3 TDDAVILIDCGPDFREQMLH------------AASFEKIDGVLITHEHYDHVGGLDDLRP 50 Query: 90 FLH---VPVYASPFAIGLLEAKRVYERVSKKIPCI------SFQAGDKVDVGAFSIESVR 140 F +P+Y+ + L A+ Y + K P + +AG + I ++ Sbjct: 51 FCRFGEIPIYSDEYTATHLRARMPYCFLEHKYPGVPQIFLQEVEAGKTFFINNTEITPLQ 110 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 V H + I + I TD ++ E + L N Sbjct: 111 VMHGRLPILGYRIGKRMAYI-----------------TDMLTMPEESYEQLHDLDVLVVN 153 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 A+R + + I + + + S Sbjct: 154 ALRVKPHPTHQSISEALETAKRIGARETYFIHMSHHAG 191 >gi|26344199|dbj|BAC35756.1| unnamed protein product [Mus musculus] Length = 296 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 44/277 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ VD++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSVDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIV 255 + + V T ++++ I + G + Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY 264 >gi|26338211|dbj|BAC32791.1| unnamed protein product [Mus musculus] Length = 213 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|210629983|ref|ZP_03296206.1| hypothetical protein COLSTE_00090 [Collinsella stercoris DSM 13279] gi|210160734|gb|EEA91705.1| hypothetical protein COLSTE_00090 [Collinsella stercoris DSM 13279] Length = 244 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 61/208 (29%), Gaps = 22/208 (10%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 MID G S + V I + + ++ A+ +TH H DH + P+ Sbjct: 1 MIDNGFSRRE--------VLARIHELDLDENDVRALVLTHEHSDHVSGVSVWVKRWEGPL 52 Query: 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRS 155 +AS +P +F G++ +V +++ H + + Sbjct: 53 FASQGTPD-ARKYLAC------LPFETFGPGEEFEVAGVRVQTFPTTHDVINPVGFRFSC 105 Query: 156 PVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDS-------TNAMREGTCI 208 I + D + + D L N + L S G Sbjct: 106 QGDAIGYVTDTGTLPPGAMSLLRDARILAIESNHDVPMLRTGSYPRHLQDRIISELGHLS 165 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 +E+ + + V + + Sbjct: 166 NEQAAGALRELVTDRTEHVVAMHISQEN 193 >gi|15827053|ref|NP_301316.1| hypothetical protein ML0270 [Mycobacterium leprae TN] gi|221229531|ref|YP_002502947.1| hypothetical protein MLBr_00270 [Mycobacterium leprae Br4923] gi|3129988|emb|CAA18938.1| hypothetical protein MLCB4.17 [Mycobacterium leprae] gi|13092601|emb|CAC29778.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932638|emb|CAR70363.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 251 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 1/113 (0%) Query: 38 DCGVSFPKDDLPG-VDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVY 96 D GV PG D V + + E ++ AI +THAH DH G+ S PVY Sbjct: 29 DTGVMLIDTGYPGDRDDVVASLRQLGYEAGDVRAILLTHAHIDHMGSAIWFASKHRTPVY 88 Query: 97 ASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +G + + + + I +Q + G + IP Sbjct: 89 CHADEVGHTKREYLEQVSLLNIAMRVWQPRWAIWSGHVLRSGGLIRGGIPTAQ 141 >gi|229191202|ref|ZP_04318191.1| Metallo-beta-lactamase [Bacillus cereus ATCC 10876] gi|228592352|gb|EEK50182.1| Metallo-beta-lactamase [Bacillus cereus ATCC 10876] Length = 285 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPHTDDFVLVDAGMPKCANEI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 96 IIELIKYWDVPVYAHQMEIPFL 117 >gi|301156056|emb|CBW15527.1| predicted metal-binding enzyme [Haemophilus parainfluenzae T3T1] Length = 209 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 22/167 (13%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I I + NL A+ +TH H DH GA + ++ ++ S E + ++E + ++ Sbjct: 38 IQRIEELELNLKAVLLTHGHLDHVGAAEAIRDHFNIEIWGSQE-----EDRFLFESLPQQ 92 Query: 118 IPCI-------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 Q G+K+ +GAF+ E + + P + NI TG Sbjct: 93 SQQFGLPYISAFTPDRWFNQEGEKIQIGAFTFEILHLPGHTPGHIG--FIEHEKNIAFTG 150 Query: 165 DWKLDDD--AILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 D + D D+L + + L D G + Sbjct: 151 DVLFQNSIGRTDFPRGDFDTLISSIKNKLFTLNDDMVVIAGHGPYTT 197 >gi|254827875|ref|ZP_05232562.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258600256|gb|EEW13581.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length = 243 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGYKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++ D++++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKPDDRLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAGDKVFVYTADSAYQDSFIPF 164 >gi|313115614|ref|ZP_07801072.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622063|gb|EFQ05560.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 262 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 ++++++D G GV + + + I +TH H DH L Sbjct: 18 VRCGQRYLIVDMG--------KGVRTTSAALKALGLAVSDCDGILVTHEHSDHVKGLSTF 69 Query: 88 WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPE 147 +PVY + + + + G + DVGAF ++S +H +P Sbjct: 70 LKKNTLPVYGAAATLDF----LDSNGIVPASCELHELEGREEDVGAFGVQSFPTSHDVP- 124 Query: 148 TMALVIRSPVGNIV 161 + I +P G + Sbjct: 125 CVGYRIHTPDGKTM 138 >gi|153810164|ref|ZP_01962832.1| hypothetical protein RUMOBE_00545 [Ruminococcus obeum ATCC 29174] gi|149833343|gb|EDM88424.1| hypothetical protein RUMOBE_00545 [Ruminococcus obeum ATCC 29174] Length = 209 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + + +++D P D+ ++ +++ + +AI +TH H D Sbjct: 17 NCYFL--KNKETEEMLIVD-----PGDNADRIE------QKVLEMQGRPVAILLTHGHFD 63 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ---------AGDKVD 130 H A ++ ++P+YA E R++ +S V+ Sbjct: 64 HILAAEEIKKKYNIPIYA----CAKEEKTLQDPRINLTAFHMSSYTLKADVYLTDLQVVE 119 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + FS++ + + ++ ++ +GD Sbjct: 120 LAGFSVQMIETPGHTLGSCCYYLKDEG--VLFSGD 152 >gi|95928892|ref|ZP_01311638.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95135237|gb|EAT16890.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 273 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 22/171 (12%) Query: 56 PDITF--IMKERKNLMAIFITHAHEDHYGALHD------LWSFLHVPVYASPFAIGLLEA 107 PD+ + + + + IF+TH H DH+G L + L +P+Y P A+ A Sbjct: 57 PDLRAQLVRENLEGIDGIFLTHWHFDHFGGLGEMEYYVKLDRKEPIPLYLPPSAVDSFHA 116 Query: 108 KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + + + ++ G G I ++ NH I ET +I S V + + D Sbjct: 117 --AFPYLHDVLVPQPWEFGKTYKRGDVGITALPANHGI-ETAGFLIESDVSRLAYFPDTS 173 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIY 218 D V E I L+CD+T + S I + I Sbjct: 174 GLPDVTKRQV-----------EAIDCLICDATFSDSNWFPDSHMSIAEAIE 213 >gi|167749834|ref|ZP_02421961.1| hypothetical protein EUBSIR_00802 [Eubacterium siraeum DSM 15702] gi|167657146|gb|EDS01276.1| hypothetical protein EUBSIR_00802 [Eubacterium siraeum DSM 15702] Length = 212 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 29/150 (19%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GE+G N + ++ +ID P DD + + + KE L I + Sbjct: 8 LGELGTNCYIV---ISAAGNAAVID-----PADDAQRI------LDTLGKENAELKMILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ DL VY + +K E + Sbjct: 54 THGHFDHTGAVADLKKQTGAKVY--------IHSK--DECMLDDTIKNVAYLCPGYSYKP 103 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHT 163 F+ + + + + + + +++HT Sbjct: 104 FTADVL-----VSDGDIIRLDEIEFSVMHT 128 >gi|196038058|ref|ZP_03105368.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|229092109|ref|ZP_04223292.1| Metallo-beta-lactamase [Bacillus cereus Rock3-42] gi|196031328|gb|EDX69925.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|228691274|gb|EEL45037.1| Metallo-beta-lactamase [Bacillus cereus Rock3-42] Length = 285 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPHTNDFVLVDAGMPKCANEI---------ISVAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 96 IIELIKYWDVPVYAHQMEIPFL 117 >gi|41019477|sp|Q58897|RNZ_METJA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 317 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 40/140 (28%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + DCG + + + F + IFITH H Sbjct: 18 KNRNHIGIAFKFGGEVFLFDCG-----------ENIQRQMLFTEVSPMKINHIFITHLHG 66 Query: 79 DHYGALHDLWSFLHV-------PVYASPFAIGLLEA--KRVYERVSKKIPCISFQAGDKV 129 DH + L + ++ ++E K + I + + Sbjct: 67 DHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIENSLKLGTHYIEFPIKVYEIYTKEPI 126 Query: 130 DV---GAFSIESVRVNHSIP 146 + + I + H IP Sbjct: 127 TIYKEENYEIIAYPTEHGIP 146 >gi|47564246|ref|ZP_00235291.1| metal-dependent hydrolase [Bacillus cereus G9241] gi|47558398|gb|EAL16721.1| metal-dependent hydrolase [Bacillus cereus G9241] Length = 281 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G P + +++ID G+ +++ I+ K AI +TH H DH G Sbjct: 41 GHPHTNDFVLIDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 92 IIELIKYWDVPVYAHKMEIPFL 113 >gi|229122661|ref|ZP_04251872.1| Metallo-beta-lactamase [Bacillus cereus 95/8201] gi|228660913|gb|EEL16542.1| Metallo-beta-lactamase [Bacillus cereus 95/8201] Length = 285 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNH 143 + +L + VPVYA I L ++ Y + + F E + + + Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDSTVEGGMIAKMSPL----FPNEPIDLGN 151 Query: 144 SIPETMALVIRSPVGNIVHTGDWKLDDDA 172 SI + G + H D++ Sbjct: 152 SI------KVLPTDGTVPHMPDFRWIHTP 174 >gi|237715173|ref|ZP_04545654.1| hydrolase [Bacteroides sp. D1] gi|262408876|ref|ZP_06085421.1| hydrolase [Bacteroides sp. 2_1_22] gi|294644337|ref|ZP_06722103.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294810711|ref|ZP_06769359.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445006|gb|EEO50797.1| hydrolase [Bacteroides sp. D1] gi|262353087|gb|EEZ02182.1| hydrolase [Bacteroides sp. 2_1_22] gi|292640307|gb|EFF58559.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294442044|gb|EFG10863.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 252 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETDDARILIDCG---------------PDFRTQVLHLPFERIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + + VG + Sbjct: 85 DLRPFCRFGSVPIYAEDYVAQGLRLRMPYCFVDHRYPGVPDIPLQVISVGQSFSINHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L GI L+ Sbjct: 145 LPLRVMH----GRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLVM 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + + +++ + + S + + + ++ + Sbjct: 190 ---NALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHDMG-LHAEVEKNLPENIHLAF 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGLDIY 251 >gi|228986186|ref|ZP_04146328.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228773567|gb|EEM21991.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 281 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 12/77 (15%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G P + +++ID G+ +++ I+ K AI +TH H DH G Sbjct: 41 GQPHTNDFVLIDAGMPKCANEI---------ISVTEKRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPF 100 + +L + VPVYA Sbjct: 92 IIELIKYWDVPVYAHQM 108 >gi|15669696|ref|NP_248509.1| hypothetical protein MJ_1502 [Methanocaldococcus jannaschii DSM 2661] gi|1592137|gb|AAB99515.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 324 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 40/140 (28%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + DCG + + + F + IFITH H Sbjct: 25 KNRNHIGIAFKFGGEVFLFDCG-----------ENIQRQMLFTEVSPMKINHIFITHLHG 73 Query: 79 DHYGALHDLWSFLHV-------PVYASPFAIGLLEA--KRVYERVSKKIPCISFQAGDKV 129 DH + L + ++ ++E K + I + + Sbjct: 74 DHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIENSLKLGTHYIEFPIKVYEIYTKEPI 133 Query: 130 DV---GAFSIESVRVNHSIP 146 + + I + H IP Sbjct: 134 TIYKEENYEIIAYPTEHGIP 153 >gi|254563480|ref|YP_003070575.1| metallo-hydrolase/oxidoreductase [Methylobacterium extorquens DM4] gi|254270758|emb|CAX26763.1| putative metallo-hydrolase/oxidoreductase, beta-lactamase domain protein [Methylobacterium extorquens DM4] Length = 299 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G R W+++D G+ P E AI +TH H D Sbjct: 42 NVVFVGSPGAGDRNWVLVDAGI--PGSKAAIRSAAAARFG----EGARPAAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G L DL PVYA Sbjct: 96 HVGVLEDLAEEWDAPVYAHGL 116 >gi|226227392|ref|YP_002761498.1| hydrolase [Gemmatimonas aurantiaca T-27] gi|226090583|dbj|BAH39028.1| hydrolase [Gemmatimonas aurantiaca T-27] Length = 220 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 25/157 (15%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +K ++L PL E N L P+S K +++D P D+ V+ + + Sbjct: 8 LKVQQLTVGPL---EE---NCWLL--ADPASGKAVLVD-----PGDE---VERLLAAVD- 50 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL------EAKRVYERV 114 L AI++THAH DH GA+ L VPV+ P + L A+ Sbjct: 51 --ATGCTLEAIWLTHAHFDHVGAVAPLLRERPVPVWLHPLDLPLYGNAATSAARWGISIE 108 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMAL 151 + G V +G F E V P +A Sbjct: 109 TPTGATEPLAEGSVVSLGRFQFEVWHVPGHAPGHVAF 145 >gi|218233583|ref|YP_002365853.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218161540|gb|ACK61532.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 244 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I + + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQIGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 165 >gi|328866931|gb|EGG15314.1| beta-lactamase domain-containing protein [Dictyostelium fasciculatum] Length = 768 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 28/200 (14%) Query: 6 LVFLPL-GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F PL GG G+I L + I++DCG + L + + K Sbjct: 5 IKFTPLCGGAGQITPPCYLLEIDNFC----ILLDCGWN--------AKLDISLLDELKKV 52 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASP--------FAIGLLEAKRVYERV 114 + AI +T+ +H GAL L +Y + F L ++ E Sbjct: 53 ANKVDAILLTYPDTEHIGALPYAIGKLGLTGKIYGTTPIHKMGQIFMYDLYTSRMAQEEF 112 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI--RSPVGNIVHTGDWKLDDDA 172 + D+ S + IP++ ++I + + + Sbjct: 113 DRFDLDEVDMCFDQSRFKELSYSQH---YEIPDSDGIIITPYLAGHMVGGSVWRIAKESD 169 Query: 173 ILGDVTDKDSLCAIGNEGIL 192 ++ D + EG L Sbjct: 170 VIVYAVDINHRRESHLEGFL 189 >gi|315032925|gb|EFT44857.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0017] Length = 220 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + KN AI +TH H D Sbjct: 27 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKNPAAILLTHTHYD 71 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 72 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 126 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 127 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 156 >gi|168035028|ref|XP_001770013.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678734|gb|EDQ65189.1| predicted protein [Physcomitrella patens subsp. patens] Length = 530 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 108/327 (33%), Gaps = 44/327 (13%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DHY L + ++ S L+ + + + V + Sbjct: 218 FLTHFHTDHYQGLTRGFRH--GKIFCSSITARLISLRI----GVPLDRIQALPLNETVLI 271 Query: 132 GAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + + NH P ++ ++ P ++HTGD++ +D S + Sbjct: 272 DGVRVTFIDANH-CPGSVMILFEPPNGEVVLHTGDFR--------YYSDMASNDVLRKCR 322 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMK----NAKGCVLVTTFSSSVSRIRSIIDI 246 I L+ D+T + + + + + D ++ N K L+ T++ + + + ++ Sbjct: 323 ITTLILDTTYCDPQHDFPKQDSVIQFVIDAIQAEAFNPKTLFLIGTYT--IGKEKLFLE- 379 Query: 247 AEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF---GLYPREQLIVIATGSQG 303 +G +L++ V V + ++ + V+ S Sbjct: 380 ----------VGKALQKYVYVGSAKQRLLDCMDLTEEDKRWLTTKDQESHIHVVPLWSVA 429 Query: 304 EPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAEC 363 + +SR D+++ S ++ R + Sbjct: 430 S-FKRMGSISRHYH-----GRYDSIVAFSPTGCSFGKDKKRVQGRPGRR--YQQGSIIRY 481 Query: 364 PVHVSGHPYPNDLKRMYQWIRPQVLVA 390 V S H +LK ++I + ++ Sbjct: 482 EVPYSEHSSFTELKEFVRFIGSENIIP 508 >gi|218532410|ref|YP_002423226.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|218524713|gb|ACK85298.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] Length = 299 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G R W+++D G+ P E AI +TH H D Sbjct: 42 NVVFVGSPGAGDRNWVLVDAGI--PGSKAAIRSAAAARFG----EGARPAAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G L DL PVYA Sbjct: 96 HVGVLEDLAEEWDAPVYAHGL 116 >gi|257079663|ref|ZP_05574024.1| metallo-beta-lactamase [Enterococcus faecalis JH1] gi|294780821|ref|ZP_06746176.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|307270810|ref|ZP_07552099.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|256987693|gb|EEU74995.1| metallo-beta-lactamase [Enterococcus faecalis JH1] gi|294452066|gb|EFG20513.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|306512842|gb|EFM81485.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|329572210|gb|EGG53870.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1467] Length = 208 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + KN AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKNPAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|169158671|emb|CAQ12170.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Mus musculus] Length = 213 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|29840031|ref|NP_829137.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] gi|29834378|gb|AAP05015.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] Length = 277 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 37/239 (15%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGAL----- 84 K +ID G PD + + L +F+TH H DH G + Sbjct: 59 GKNFLIDAG---------------PDFRQQMLENHIQQLDGVFLTHPHYDHIGGIDDLRA 103 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + +PV S F L +K V + + A + Sbjct: 104 WYVMHQRSLPVVVSAFTYKYL-SKTREHIVFPQSSATALPASLNFTILN-EAYGESTFLD 161 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALM-CDSTNAMR 203 +P T + + + + + D + + G+ L+ S N Sbjct: 162 LPYTYVTYYQKSCEVMGY--RFGNLAYLTDMNRYDHEIFSYL--SGVETLILSASPNQPP 217 Query: 204 EGTCISEK---GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGS 259 + + +++T S ++ + ++A+ + G Sbjct: 218 PAFHGYGHAHFTLSQAEDFASHVGAKKLIITHISHNLQK-----ELADYSDKVCAYDGM 271 >gi|167624019|ref|YP_001674313.1| beta-lactamase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354041|gb|ABZ76654.1| beta-lactamase domain protein [Shewanella halifaxensis HAW-EB4] Length = 367 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 11/116 (9%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYG 82 Y + W ++D G++ ++ + + + K + + TH H DH G Sbjct: 60 YILEDTDGWYLVDTGLNTEENKALWI--------ALAENYLTAKPVKGVICTHFHYDHSG 111 Query: 83 ALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIES 138 L + VP+Y + +L S F G Sbjct: 112 LSSWLTEYFDVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSAGYAEKVF 167 >gi|146342135|ref|YP_001207183.1| putative metallo-hydrolase/oxidoreductase [Bradyrhizobium sp. ORS278] gi|146194941|emb|CAL78966.1| conserved hypothetical protein; putative Metallo-hydrolase/oxidoreductase [Bradyrhizobium sp. ORS278] Length = 286 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 51/154 (33%), Gaps = 28/154 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER----KNLMAIFITH 75 N+ YG W++ID G F P I + R I +TH Sbjct: 41 NVVFYGRPGAGDGGWVLIDAG-MFGSG---------PAIRHAAQARFGGSGRPACIILTH 90 Query: 76 AHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI------PCISFQAGDKV 129 H DH G L DL VPVYA P L R Y + V Sbjct: 91 GHFDHVGVLEDLSRAWDVPVYAHPLEHPYLNGTRSYPPPDPHVGGGMLATLSPLFPTSPV 150 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 DVG + + +HS+P P +HT Sbjct: 151 DVGT-QLRELPADHSVP-------FMPDFRWIHT 176 >gi|326329314|ref|ZP_08195639.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] gi|325952889|gb|EGD44904.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] Length = 478 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 76/257 (29%), Gaps = 50/257 (19%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA 70 LG G + + + +++D G+ +L + + ++ A Sbjct: 27 LGASGTVTGS----RFLVTDGSDRLLVDAGLYQGLRELRRL-----NWAPFPVPPADIDA 77 Query: 71 IFITHAHEDHYGALHDLWSFLHV-PVYASPFAIGL----LE--AKRVYE--RVSKKIPCI 121 + +THAH DH G L L S V +P L L A E R + + Sbjct: 78 VVLTHAHLDHTGYLPRLVSDGFCGEVLCTPGTASLTTIVLRDSAHLQEEDARYANEGGWT 137 Query: 122 SFQA----------------------GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGN 159 G+ V S+ R H I + VI Sbjct: 138 KHDPALPLYTSADVERTLERLHPVAFGEPRAVDGMSVTLQRAGH-ILGSSVAVIDVGGER 196 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 +V +GD IL + A++ +ST R + + Sbjct: 197 VVFSGDLGRPGHPILRSPAKPPA--------ASAMVLESTYGDRRHPAADPDALADTVRR 248 Query: 220 IMKNAKGCVLVTTFSSS 236 + G VL+ F+ Sbjct: 249 TVDRG-GVVLIPAFAVD 264 >gi|308272442|emb|CBX29046.1| hypothetical protein N47_J00270 [uncultured Desulfobacterium sp.] Length = 270 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 15/143 (10%) Query: 35 IMIDCGVS-FPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 ++ID G+S + + + P+ NL AI ++H H DH + L + Sbjct: 39 VLIDAGLSGVEIERRMKANNLVPN---------NLDAIIVSHEHSDHISGVGVLSRRFAI 89 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVY S K + + F+ G ++ + ++H +T + Sbjct: 90 PVYISSKT-----QKAASSFLGRIDEFKIFECGTGFNINGINFHPFSLSHDARDTAGFTV 144 Query: 154 RSPVGNIVHTGDWKLDDDAILGD 176 I D + + Sbjct: 145 TKNKTKIGIATDLGIVTTMVKEH 167 >gi|47125306|gb|AAH70095.1| Cleavage and polyadenylation specific factor 2, 100kDa [Homo sapiens] Length = 782 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 89/277 (32%), Gaps = 44/277 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIV 255 + + V T ++++ I + G + Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY 264 >gi|47219683|emb|CAG12605.1| unnamed protein product [Tetraodon nigroviridis] Length = 250 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 63/214 (29%), Gaps = 15/214 (7%) Query: 55 FPDITFIMK--ERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKR 109 P F++ + I F+TH H DHYG L +PVY + L+ +K Sbjct: 7 IPGTKFVVDAFRYGKIEGITTYFLTHFHSDHYGG---LTKNSTLPVYCNKITGNLVRSKL 63 Query: 110 VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + +V V ++ + NH + + I + Sbjct: 64 K----VAEQYIHVLPMNTQVAVDGVTVVLLDANH--YCSPEYTFPTQQEVINFAASTAFE 117 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + A+ ++G E + + S ++ + ++ Sbjct: 118 EVALNPRTIVVCGSYSVGKEKVFFELSISFSSDSQKLEQHLARFSSQYDQLVAFKPTGWT 177 Query: 230 VTTFSSSVSRIR-SIIDIAEQIGRKIVLLGSSLK 262 + SV ++ + G S ++ Sbjct: 178 FSQQVESVGDVQPDVSGNISIYGIPYSEHSSFME 211 >gi|326920924|ref|XP_003206716.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Meleagris gallopavo] Length = 782 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DENFSMDII----DSLKKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLASQP 331 >gi|256423347|ref|YP_003124000.1| cyclic-AMP phosphodiesterase [Chitinophaga pinensis DSM 2588] gi|256038255|gb|ACU61799.1| cyclic-AMP phosphodiesterase [Chitinophaga pinensis DSM 2588] Length = 316 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 34/188 (18%) Query: 7 VFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDITFIM 62 +PLG G E N++ Y S ++ +D G V F + L+ + I+ Sbjct: 26 KVIPLGVKGGTDE--SNLSSYMIAPQQSEDYVCLDAGTVHFGIEKAVQAKLLHGTASTIL 83 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVP------VYASPFAIGLLEAK-------- 108 K N+ I+H H DH + ++ P +Y + I +L+ K Sbjct: 84 KR--NVKGFLISHGHLDHLAGM-----IINSPDDSTKNIYGLDYCIDILKDKYFTWKSWA 136 Query: 109 -RVYERVSK---KIPCISFQAGDKVDVGA--FSIESVRVNHSIP-ETMALVIRSPVGNIV 161 E K G +V + + + ++HS P ++ A ++R ++ Sbjct: 137 NFANEGDKPALGKYHYTVLTPGVEVPLENTSMQVTAFPLSHSNPYQSTAFLVRYEDAYLL 196 Query: 162 HTGDWKLD 169 + GD D Sbjct: 197 YLGDTGAD 204 >gi|224051637|ref|XP_002200593.1| PREDICTED: cleavage and polyadenylation specific factor 2 [Taeniopygia guttata] Length = 782 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DENFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLASQP 331 >gi|254363169|ref|ZP_04979218.1| zinc (Zn2+)-dependent hydrolase [Mannheimia haemolytica PHL213] gi|261493952|ref|ZP_05990460.1| glyoxalase II family protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494763|ref|ZP_05991242.1| glyoxalase II family protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153095063|gb|EDN75614.1| zinc (Zn2+)-dependent hydrolase [Mannheimia haemolytica PHL213] gi|261309580|gb|EEY10804.1| glyoxalase II family protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310384|gb|EEY11579.1| glyoxalase II family protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 209 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 23/159 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ +ID G D+ G+ I F+ ++ + + ITH H D Sbjct: 15 NCTVI---WDENKNAAIIDGG-----DNAEGI------IQFVESQQLKVQKLLITHGHLD 60 Query: 80 HYGALHDLWSFLHVPVYASPFA-IGLLEA---KRVYERVSKKIPCISFQA---GDKVDVG 132 H A+ L V V+ S A L E + + GD+V+VG Sbjct: 61 HIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPVNGFLPDHWLEEGDRVEVG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 S + P + I +GD + Sbjct: 121 ELSYTVRHLPGHAPGHIG--FFDFDNRIAFSGDVLFQNS 157 >gi|189347319|ref|YP_001943848.1| beta-lactamase domain protein [Chlorobium limicola DSM 245] gi|189341466|gb|ACD90869.1| beta-lactamase domain protein [Chlorobium limicola DSM 245] Length = 462 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 76/252 (30%), Gaps = 60/252 (23%) Query: 35 IMIDCGVSFP--KDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF-L 91 +++DCG+ +++ D D + + A+ ++H H DH G L L Sbjct: 26 LLLDCGLIQGSREEEALNGDPFPFDPSS-------VDAVVLSHGHIDHSGRLPLLVKRGF 78 Query: 92 HVPVYASPFAIGLLEAKRVY-----ERVSKKIPCISFQAGDKV----------------- 129 + PVY L + ER + D+ Sbjct: 79 NGPVYTQHATADLSRVLLLDSASLSERDADYRRRHPADPEDRHAEPLYTREDALRAVSRM 138 Query: 130 ----------DVGAFSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAILG 175 + + + H I + + + IV +GD +L Sbjct: 139 RGMEYREEREILPGVRLRFLDAGH-ILGSAVVELGITEEGRKRTIVFSGDLGQYGSPVLN 197 Query: 176 DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISE--KGIKKNIYDIMKNAKGCVLVTTF 233 D ++ E +M +ST R + + + + G +L+ F Sbjct: 198 ---DPET-----PEHADLVMVESTYGDRMHRSFQDTLAELGEIFRTACREC-GNILIPAF 248 Query: 234 SSSVSRIRSIID 245 S + R + ++ Sbjct: 249 S--IGRSQELLY 258 >gi|57242214|ref|ZP_00370153.1| probable hydrolase Cj0809c [Campylobacter upsaliensis RM3195] gi|57016894|gb|EAL53676.1| probable hydrolase Cj0809c [Campylobacter upsaliensis RM3195] Length = 198 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 21/149 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + R +ID GV + F+ K KN +AI TH H D Sbjct: 14 NCYIL----STQRGEFIIDPGVG--------------ALEFVKKHTKNPLAILNTHGHFD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +VP+Y LE + K + ++ + +++ + Sbjct: 56 HIWDNAAVKKEFNVPLYIHKNDAFFLEDPFK-QGFEKHKADVLIKSEEPLELFDSIFKFH 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P + I ++ +GD+ Sbjct: 115 FLPGHTPGCCMIEIIGEG--VMFSGDFLF 141 >gi|118478415|ref|YP_895566.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|118417640|gb|ABK86059.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] Length = 285 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFVLVDAGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G SI+ Sbjct: 96 ILELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPEFRWIHTPGHTPGHISLFR 185 >gi|254832103|ref|ZP_05236758.1| hypothetical protein Lmon1_12184 [Listeria monocytogenes 10403S] Length = 243 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++ D++++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKPDDRLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAGDKVFVYTADSAYQDSFIPF 164 >gi|153952315|ref|YP_001398270.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939761|gb|ABS44502.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 198 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 51/151 (33%), Gaps = 20/151 (13%) Query: 21 MALYG---YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 +Y Y + + +ID PG D + FI + KN +AI TH H Sbjct: 8 CGVYETNCYILFTPKGEFIID----------PGTDALL----FIKQHVKNPLAILNTHGH 53 Query: 78 EDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + ++P+Y +L + D +++ + Sbjct: 54 YDHIWDNAKVKKEYNIPIYIHKNDAFMLHDHF-NQGYDSSDADFLVDNEDILNICGVDFK 112 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + P + I S NI+ +GD+ Sbjct: 113 FHFLPGHTPGCTMIEIAS--KNIMFSGDFLF 141 >gi|46907164|ref|YP_013553.1| hypothetical protein LMOf2365_0951 [Listeria monocytogenes serotype 4b str. F2365] gi|47092139|ref|ZP_00229932.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|226223549|ref|YP_002757656.1| hypothetical protein Lm4b_00949 [Listeria monocytogenes Clip81459] gi|254823800|ref|ZP_05228801.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254852423|ref|ZP_05241771.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254931314|ref|ZP_05264673.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|255522404|ref|ZP_05389641.1| hypothetical protein LmonocFSL_14527 [Listeria monocytogenes FSL J1-175] gi|300764139|ref|ZP_07074134.1| metal-dependent hydrolase [Listeria monocytogenes FSL N1-017] gi|46880431|gb|AAT03730.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019579|gb|EAL10319.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|225876011|emb|CAS04717.1| Hypothetical protein Lm4b_00949 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605731|gb|EEW18339.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293582864|gb|EFF94896.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593022|gb|EFG00783.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300515129|gb|EFK42181.1| metal-dependent hydrolase [Listeria monocytogenes FSL N1-017] gi|328466952|gb|EGF38055.1| hypothetical protein LM1816_12987 [Listeria monocytogenes 1816] gi|332311338|gb|EGJ24433.1| Metal-dependent beta-lactamase [Listeria monocytogenes str. Scott A] Length = 243 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++ D++++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKPDDRLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAGDKVFVYTADSAYQDSFIPF 164 >gi|57167808|ref|ZP_00366948.1| probable hydrolase Cj0809c [Campylobacter coli RM2228] gi|148926971|ref|ZP_01810648.1| putative hydrolase [Campylobacter jejuni subsp. jejuni CG8486] gi|305432170|ref|ZP_07401334.1| metallo-beta-lactamase [Campylobacter coli JV20] gi|57020930|gb|EAL57594.1| probable hydrolase Cj0809c [Campylobacter coli RM2228] gi|145845055|gb|EDK22152.1| putative hydrolase [Campylobacter jejuni subsp. jejuni CG8486] gi|304444713|gb|EFM37362.1| metallo-beta-lactamase [Campylobacter coli JV20] Length = 198 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +S+ +ID PGV+ + +FI + K +AI TH H D Sbjct: 14 NCYIL----NTSKGDFIID----------PGVNAL----SFIKQYAKKPLAILNTHGHYD 55 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H + +P+Y +L+ + + + D++++ + Sbjct: 56 HVWDNARVKKEFDIPIYIHKNDEFMLQDPFG-KGFEPSKADVLIENEDELEISNTRFKFH 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 + P I N++ +GD+ +D + + Sbjct: 115 FLPGHTPGCTM--IELMGENLMFSGDFLFYRSIGRWDFPYSDANLMKQ 160 >gi|242237728|ref|YP_002985909.1| beta-lactamase [Dickeya dadantii Ech703] gi|242129785|gb|ACS84087.1| beta-lactamase domain protein [Dickeya dadantii Ech703] Length = 353 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 122/391 (31%), Gaps = 66/391 (16%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 + + GVG G + A + +M+D G + PG PDI + Sbjct: 5 IAVSGVG--GKSPAAF--MVEVDGFRLMLDLG----EGPRPG---QLPDIGELP----PP 49 Query: 69 MAIFITHAHEDHYGALHDLWSFLH-VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 AI ++HAH DH G L L PVYA+ + A V E Sbjct: 50 DAICLSHAHIDHCGGL-ILREAWGYPPVYATERVWRQIPATWVAEE-----DRRILPEHG 103 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIG 187 + ++G + + R HS P + + + + G + +TGDW D Sbjct: 104 RCEIGPVLMITGRSGHS-PGGIWMHVVAGGG-LTYTGDWS---TESSLFPFDL------- 151 Query: 188 NEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 L+ D++ R + +K I +++ + L+ R + Sbjct: 152 PPEAALLITDASYGDRAQSLAEQKAI------MLQACRDGALIGVPGW--GRAPDMALYL 203 Query: 248 EQIGRKIVLLGSSL--KRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEP 305 + G L +++ + + + LS +S Y + +I+ + G+ Sbjct: 204 MEYGVVPRLCSQVQQEIKLLIDSQIPYLRQYLHHLLSHQSARPYRPDDVIICSDGTASSG 263 Query: 306 RSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPV 365 SA + + + + + R V Sbjct: 264 LSAALRSQADRFHFIFSGQIPYSSPAMMMLQAG---------RARWLPWNV--------- 305 Query: 366 HVSGHPYPNDLKRMYQWIRPQVLVAIHGEPL 396 HP +D + Q ++ EP Sbjct: 306 ----HPRLSDQLMLANLTHAQTVIPAFIEPH 332 >gi|300814224|ref|ZP_07094500.1| metallo-beta-lactamase domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511648|gb|EFK38872.1| metallo-beta-lactamase domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 261 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 23/150 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFIT 74 N Y I+ID G+S K + G+D + AI +T Sbjct: 12 GNCQFVEY----KNTRILIDAGLSGKKIENNLKSRGID------------PSTIDAILVT 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH ++ L ++ V+++ +A + F+ + Sbjct: 56 HEHRDHVTSVGVLSRRYNIKVFSNIETA---QAMTPVVKKINSENIYIFENNRAFNFKDL 112 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I++ H + VI + T Sbjct: 113 KIKAFDTFHDCQKGCGFVIMGNKKISLLTD 142 >gi|256763124|ref|ZP_05503704.1| metallo-beta-lactamase [Enterococcus faecalis T3] gi|256684375|gb|EEU24070.1| metallo-beta-lactamase [Enterococcus faecalis T3] Length = 208 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + ++ID G G L+ I + KN AI +TH H D Sbjct: 15 NCYLV----YNEEALLIIDPGAE-------GAKLI----QEITRLGKNPAAILLTHTHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESV 139 H GA+ +L +PVY SP LE + + + V E Sbjct: 60 HIGAVEELRHHYQIPVYVSP-----LEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFK 114 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 ++ I V+ +P +I + + DD Sbjct: 115 LTDYEIGGMKFSVVPTPGHSIG-SVSFVFDD 144 >gi|313471929|ref|ZP_07812421.1| metallo-beta-lactamase family protein [Lactobacillus jensenii 1153] gi|313449030|gb|EFR61304.1| metallo-beta-lactamase family protein [Lactobacillus jensenii 1153] Length = 63 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 Y + +++DCG+ FP+DDL G++ V D ++ +K RK Sbjct: 2 YCVQYQDEIVIMDCGIKFPEDDLLGINYVISDYSYPVKNRKK 43 >gi|296139003|ref|YP_003646246.1| beta-lactamase [Tsukamurella paurometabola DSM 20162] gi|296027137|gb|ADG77907.1| beta-lactamase domain protein [Tsukamurella paurometabola DSM 20162] Length = 242 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 32 RKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL 91 +ID G + D V ++ I + +++ AI +THAH DH G L Sbjct: 25 DDVTLIDAGWTGD------ADRVEAELASIGRRPQDVRAILVTHAHIDHVGGAAALHERH 78 Query: 92 HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +PV A P + + + I I+++ Sbjct: 79 GIPVLAHPDELAHARGETHEQATPLDILPIAWRP 112 >gi|227487233|ref|ZP_03917549.1| Zn-dependent hydrolase or glyoxylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541598|ref|ZP_03971647.1| Zn-dependent hydrolase or glyoxylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092891|gb|EEI28203.1| Zn-dependent hydrolase or glyoxylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182566|gb|EEI63538.1| Zn-dependent hydrolase or glyoxylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 208 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 25/154 (16%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG E+ N+ + G + +ID VD P + + I Sbjct: 18 GGEWEVDNNIWVVG----DDTEVYIIDA--------AHSVD---PIAEVVGDRA--VKGI 60 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 TH H DH L P++ P + ++ + + + + Sbjct: 61 ICTHGHNDHITVAPQLSQKYDAPIFLHPG------DRMLWNETHPDVAFQEIEDRQRFGI 114 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +E + P + L + P ++ +GD Sbjct: 115 AGTDLEFISTPGHSPGSGCLYM--PEAGVLFSGD 146 >gi|210623796|ref|ZP_03294056.1| hypothetical protein CLOHIR_02007 [Clostridium hiranonis DSM 13275] gi|210153378|gb|EEA84384.1| hypothetical protein CLOHIR_02007 [Clostridium hiranonis DSM 13275] Length = 211 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 8/138 (5%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA------KRVY 111 I ++ +E +L + +TH H DH G + D+ ++ VPV A +L + Sbjct: 39 IEYLKEEGLDLKYVILTHGHADHIGYVKDILAYKKVPVVAHKDEKEMLNDASYNLSNMMR 98 Query: 112 ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++ I D + +G + + + IR+ I +K Sbjct: 99 CGKTEFDADIYVDDRDSLYLGKTKLLFIHTPGHTEG--GMCIRTENNLITGDTLFKGSMG 156 Query: 172 AILGDVTDKDSLCAIGNE 189 D+ + N+ Sbjct: 157 RCDLRGGDERKMKKSLNK 174 >gi|92096533|gb|AAI15305.1| Dclre1c protein [Danio rerio] Length = 639 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 103/346 (29%), Gaps = 55/346 (15%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLH----VPVYASPFAIGLL----EAKRVYERVSK-- 116 A F++H H+DH L L L V +Y S LL + + Sbjct: 27 RAYFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKELLLSNPRYAFWEDHIVPLE 86 Query: 117 --KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 IS + + + H P ++ + G +++TGD++ Sbjct: 87 LDSPTNISLIDESTGETEDVVVTLLSAGH-CPGSVMFLFEGAKGTVLYTGDFR------- 138 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFS 234 + D+ + K I+ D + + Sbjct: 139 ------------------LAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSRE 180 Query: 235 SSVSRIRSII-DIAEQIGRKIVLLG-SSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 + ++ I+ ++ D Q +V L + + ++G Q+ ++ E Sbjct: 181 ACLAGIQQLVQDWICQSPYHVVWLNCKAAYGYEYLFTNLGQEFSSQIHVNSLDMFKKMPE 240 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIK------ 346 L + T + + + + E + + + S A G + I IK Sbjct: 241 ILCHVTTNRATQIHAC--RHPKDE----EFFRANRLPCGSTAPDGIPLNIISIKPSTIWF 294 Query: 347 -NRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 R + V V + S H ++K +I P + Sbjct: 295 GERTRKTSVVVKMGSSSYRACFSFHSSYLEVKDFLSYICPVNIYPN 340 >gi|328948108|ref|YP_004365445.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] gi|328448432|gb|AEB14148.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] Length = 314 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 G IG N S + ++DCG + + G + IF+ Sbjct: 55 YGTIGGNTPCIE-LRSKSDELFLLDCGTGLREFSVAGRQ---------PENGHY--NIFL 102 Query: 74 THAHEDHYGALHDLWSFL----HVPVYASPFAIGLLEAKRV-------------YERVSK 116 +H H DH + +Y +PFA E +E V Sbjct: 103 SHFHWDHIQGFPFFGQSFSPNSKIDIY-TPFADA--EEYLERQSSLPYFPINACFESVKN 159 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 ++ Q G+ +++G IE R+ H ++ + +++ D +L Sbjct: 160 QLSFHLMQEGNPIEIGGLKIECHRMFHP-GDSYSYSFEEDGKRFIYSTDVELQTSDFDKG 218 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAM 202 N +L TN Sbjct: 219 C---ARNKFFENADVLVFDSQYTNPE 241 >gi|330803886|ref|XP_003289932.1| hypothetical protein DICPUDRAFT_80682 [Dictyostelium purpureum] gi|325079974|gb|EGC33550.1| hypothetical protein DICPUDRAFT_80682 [Dictyostelium purpureum] Length = 752 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 36/186 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F L G G N Y I++DCG+S+ D + + K Sbjct: 5 VKFTALSG----GDNEKPPCYLLEIDDFCILLDCGLSYDLDFSL--------LEPLKKYA 52 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLH--VPVYASPFAI--------GLLEAKRVYERVS 115 + A+ ++++ H G L L +Y + + L E K E Sbjct: 53 DKIDAVLLSNSDLLHIGGLPYAVGKLGLTGTIYGTTPVLKMGTMFLYDLYENKMAQEEFD 112 Query: 116 KKIPCISFQAGDKVDVGAFSIESV--------------RVNHSIPETMALVIRSPVGNIV 161 + + S + + + I +I+ Sbjct: 113 QFNLDNVDACFGEDRFKELSFSQHYLLQGKGKGISITPYLAGHMVGSSVWRITKGTYSII 172 Query: 162 HTGDWK 167 + D+ Sbjct: 173 YALDFN 178 >gi|218233368|ref|YP_002367817.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218161325|gb|ACK61317.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 285 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 12/77 (15%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPHTNDFVLVDAGMPKCANEI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPF 100 + +L VPVYA Sbjct: 96 IIELIKHWDVPVYAHQM 112 >gi|327400611|ref|YP_004341450.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316119|gb|AEA46735.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 231 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 24/133 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 + L I+ID G +F + GV + + A+ ITH H Sbjct: 19 SCVLVE-----DSARILIDIGCGAFRRLGDVGV------------RVEEIDAVLITHNHL 61 Query: 79 DHYG-ALHDLWSFL-----HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 DH L L + + +Y P +E+ ++ +V Sbjct: 62 DHNADLLPLLKARWLENAGKLEIYGPPGTKAFVESLLEAFPYLRQKLSFEVNEESSFEVC 121 Query: 133 AFSIESVRVNHSI 145 +E++ HSI Sbjct: 122 GMKVETIPTFHSI 134 >gi|329666467|gb|AEB92415.1| hypothetical protein LJP_0076 [Lactobacillus johnsonii DPC 6026] Length = 240 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 4/116 (3%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIG-LLEAKRVYERVSKKIPCISF 123 K++ IFI+H H DH G L L + YA+ L+E+K++ +F Sbjct: 22 KDIDMIFISHDHTDHSGGLGVLMRRYPQISAYANSGTWNYLIESKKI--GNLPVEQINTF 79 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 ++G G + S +H E V S D + G++ D Sbjct: 80 ESGVTKTFGDLDVTSFATSHDAAEPQYYVFSSGGKRFACLTDTGYVSSNVKGEIKD 135 >gi|255070137|ref|XP_002507150.1| predicted protein [Micromonas sp. RCC299] gi|255070139|ref|XP_002507151.1| predicted protein [Micromonas sp. RCC299] gi|226522425|gb|ACO68408.1| predicted protein [Micromonas sp. RCC299] gi|226522426|gb|ACO68409.1| predicted protein [Micromonas sp. RCC299] Length = 808 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 39/248 (15%) Query: 5 ELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + F PL GV IG + + Y I++DCG +D V+L+ P + K Sbjct: 7 RIKFSPLYGVQGIGED--PFCYVLDLDGFKILLDCGW----NDSFDVNLLEP----LAKV 56 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL--HVPVYAS----PFAIGLLEAKRVYERVSKKI 118 + A+ I+H +H GAL + L VYA+ + + + ++ Sbjct: 57 AAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDF 116 Query: 119 PCISFQAGDKVDVGAFSIESVR----VNH------------SIPETMALVIRSPVGNIVH 162 + D + + V H + + ++V+ Sbjct: 117 RVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDDVVY 176 Query: 163 TGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR-EGTCISEKGIKKNIYDIM 221 ++ + T +S+ L+ D++NA R + E + + I + Sbjct: 177 AVNFN-HRREKHLNGTVLESIKRPA-----VLITDASNARRLPPSKTRENDLIEAILRTV 230 Query: 222 KNAKGCVL 229 + ++ Sbjct: 231 RQDGNVLI 238 >gi|159041361|ref|YP_001540613.1| putative mRNA 3-end processing factor [Caldivirga maquilingensis IC-167] gi|157920196|gb|ABW01623.1| putative mRNA 3-end processing factor [Caldivirga maquilingensis IC-167] Length = 317 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 90/264 (34%), Gaps = 23/264 (8%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 N A+ ITH H DHY + + S + +L + + Sbjct: 30 DNYDAVLITHGHSDHY--TSHISKARR--IIMSGETLKILR---EFRGLRLGAGVTVAYP 82 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA 185 + FS+ + H + ++ +I G+++ TGD ++D IL Sbjct: 83 NRPIVFDDFSVVPLNAGH-VMGSLMYLIEFKFGSVLLTGDMNIEDSIILKG-------AE 134 Query: 186 IGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNA-KGCVLVTTFSSSVSRIRSII 244 + + L+ +ST + NI D+ + + + + ++ + + + Sbjct: 135 PYPD-VDILVIESTYGDPSFHFEPRDNVYDNIIDLAERTVRKGLRLVLSGFALGKGQELY 193 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGE 304 + G + ++ + + ++VG I + + + VIA + G Sbjct: 194 KLLISNGFNAAMD-KNVYSLNRILLNVGAISSNGDIIVADMPPRIQPSNDSVIALVTGGA 252 Query: 305 PRSALAQLSRGEMRNVKLAEKDTV 328 P + + +++L+ Sbjct: 253 PGRWIRR-----HVHIQLSSHSDF 271 >gi|325578154|ref|ZP_08148289.1| metallo-beta-lactamase [Haemophilus parainfluenzae ATCC 33392] gi|325159890|gb|EGC72019.1| metallo-beta-lactamase [Haemophilus parainfluenzae ATCC 33392] Length = 209 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 23/138 (16%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 I I + NL A+ +TH H DH GA + ++ ++ S E + ++E + ++ Sbjct: 38 IQRIEELELNLKAVLLTHGHLDHVGAAEVIRDHFNIEIWGSQE-----EDRFLFESLPQQ 92 Query: 118 IPCI-------------SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTG 164 Q G+K+ +G F+ E + + P + NI TG Sbjct: 93 SQQFGLPYISAFTPDRWFNQEGEKIQIGTFTFEILHLPGHTPGHVG--FIEHEKNIAFTG 150 Query: 165 DWKLDDDAILGDVTDKDS 182 D + TD Sbjct: 151 DVLFQNS---IGRTDFPR 165 >gi|163939001|ref|YP_001643885.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163861198|gb|ABY42257.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + + Sbjct: 69 GVLQYARLITSVTKGQLPEL--PIYGHSFD----ENGFHSLTHEPHTKGIAYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRIIAGDDVVVYSADSSYIPEFIPF 165 >gi|148675639|gb|EDL07586.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 213 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F+TH H DH L W+ P+Y SP LL + + + + D+ Sbjct: 28 FLTHMHCDHTVGLSSTWAR---PLYCSPITACLLHRRLQVSKHWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + I Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEP-------ALILG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 + I L D+TN S + + I +++ + Sbjct: 137 KQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNI 177 >gi|218902284|ref|YP_002450118.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|218537743|gb|ACK90141.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNSEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITVGNDIVVYSADSSYIPEFIPF 165 >gi|91200847|emb|CAJ73901.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 254 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 53/188 (28%), Gaps = 29/188 (15%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-----FLHVPVYASPFAIGLLEAKRVY---- 111 I L A+ ITH H DH L DL +P+Y +P + ++ Y Sbjct: 61 IKNNVTRLDAVLITHIHADHIFGLDDLRRFNIVQRKDIPIYGTPDTLEGIKRIFAYAFDI 120 Query: 112 --ERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 + V +G FSI + H LV + D Sbjct: 121 RAKNDGYVPRFSLNAIDGNVKIGGFSIVPIDAIH----GNGLVTGYRFERFAYITDVSEI 176 Query: 170 DDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 D L + N +L L A+R I + + + K Sbjct: 177 PDHS---------LAKLMNLDVLVL-----GALRYTPHAKHFNIDQALDIVSKVRPQKTY 222 Query: 230 VTTFSSSV 237 T + Sbjct: 223 FTHICHDI 230 >gi|323702160|ref|ZP_08113827.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] gi|323532847|gb|EGB22719.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] Length = 207 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 23/158 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G P + + ++D P D+ + + + K + AI +TH H D Sbjct: 14 NCYII--GCPETDQAAIVD-----PGDEARRI------LAQVAKLGLTVSAIILTHGHYD 60 Query: 80 HYGALHDLWSFLHVPVYASP-----FAI-GLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 H GA+ +L PV L + + E + K + GD + VG Sbjct: 61 HIGAVAELKKATGAPVMIHRQDSEMLTKPALNLSAWLGEDIELKPADRLLEDGDLIKVGN 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++E + P + L + V TGD Sbjct: 121 LTLEVLHTPGHTPGGICLKVGGD----VFTGDTLFAQS 154 >gi|167751926|ref|ZP_02424053.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] gi|167660167|gb|EDS04297.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] Length = 222 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 66/226 (29%), Gaps = 48/226 (21%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 ++ID G PD + + +++ AI +TH H+DH G L D Sbjct: 3 EWDDIRLVIDAG---------------PDFRYQMLRTGVRHIDAILLTHEHKDHIGGLDD 47 Query: 87 LWSF--------LHVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDVG 132 + +F + V+ + + + Y R +I V Sbjct: 48 VRAFNFVDYPTIHRIDVFGTRQTLKCVRKDFDYAFSVDKYRGVPEIELCEIDPAVPFCVK 107 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGIL 192 + V +HS L +TD ++ + Sbjct: 108 DKEVIPVSGHHS------PRFEVTGFRF-----------GELAYLTDFKTIAPAEERKLY 150 Query: 193 ALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 + NA+R S + + + I + A +T S + Sbjct: 151 GVEVLVVNALRPQPHDSHFSLDEALALIRRVAPRRAYLTHMSHEMG 196 >gi|42782195|ref|NP_979442.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|42738120|gb|AAS42050.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 281 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ K AI +TH H DH G Sbjct: 41 GNPHTDDFVLVDAGMPKCANEI---------ISVTEKRFGTNSRPQAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 92 IIELIKYWDVPVYAHEMEIPFL 113 >gi|54308337|ref|YP_129357.1| anaerobic nitric oxide reductase flavorubredoxin [Photobacterium profundum SS9] gi|46912765|emb|CAG19555.1| putative flavoprotein [Photobacterium profundum SS9] Length = 514 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 37/275 (13%) Query: 51 VDLVFPDITF-----IMKERK--NLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAI 102 +D V ++ + +E + I I HA EDH GAL L S + + P+Y + AI Sbjct: 48 IDTVDHKFSYDFVQQLEQEIDLNEIDLIVINHAEEDHAGALSVLLSKIPNTPIYCTENAI 107 Query: 103 GLLEAKRVYERVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGN 159 + + + GD +D+G + H P++M + Sbjct: 108 DSITG----HHHHPEWNFNVVKTGDSIDIGNGKSLVFIETPMLHW-PDSMMTYMTGDA-- 160 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 ++ + D A D+ + L C A + I++ Sbjct: 161 VLFSND------AFGQHYCDERLFNDEVEQNELMEQCLRYYANILTPFSP--LVTAKIHE 212 Query: 220 IMKNAKGCVLVTTFSSSVSR------IRSIIDIAEQIGRK-IVLLGSSLK---RVVSVAI 269 ++ +V T + R I ++ A + I + S+ R+++ I Sbjct: 213 VLSFNLPVDMVATSHGVIWRDNPTQIIEQYLEWANEYKEDKITIFYDSMSNNTRMMADGI 272 Query: 270 DVGIIKKDQL-FLSDESFGLYPREQLIVIATGSQG 303 GI + D + + + + +++ GS+G Sbjct: 273 AQGITETDPNVAVKIFNVSRHDKNEILTNVFGSKG 307 >gi|313884890|ref|ZP_07818642.1| hydroxyacylglutathione hydrolase [Eremococcus coleocola ACS-139-V-Col8] gi|312619581|gb|EFR31018.1| hydroxyacylglutathione hydrolase [Eremococcus coleocola ACS-139-V-Col8] Length = 238 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 38/145 (26%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HV 93 ++D P + P +D +I + L AI +TH H+DH G + ++ + + + Sbjct: 24 FIVD-----PGEAQPVLD-------YIQDQNIRLDAILLTHNHDDHTGGVREILAQIPDL 71 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVI 153 PVY + D + + + ++ +I Sbjct: 72 PVYGPQETADF--------------NSVQVAPMDTITLKNHKLAVYLTAGHTSGHISYLI 117 Query: 154 RSPVGNI-----------VHTGDWK 167 V TGD+ Sbjct: 118 DDKNLFCGDSLFMAGCGRVFTGDYH 142 >gi|288574417|ref|ZP_06392774.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570158|gb|EFC91715.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 533 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 71/281 (25%) Query: 11 LGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK---- 66 LG E+ + Y + I+IDCG+ +++ + R+ Sbjct: 6 LGAAEEVTGS----SYMLEVAGHRILIDCGLHQGRNED-------------ERNREPFHF 48 Query: 67 ---NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYERVSK 116 +L + +THAH DH G + L V ++ + L E A+ + E Sbjct: 49 DPLSLDVVLLTHAHIDHTGRVPLLVKQGFSGKVMSTLPTVELTEVLWRDSARLMKEEAEW 108 Query: 117 KIPCISFQ-------------------------AGDKVDVGAFSIESVRVNHSIPETMAL 151 K + + DK+++ R I + L Sbjct: 109 KTKKNARKGLPAVEPLFEDEDVSEALNLLAPVTYDDKIELFPEVFVRFRDAGHIMGSAIL 168 Query: 152 VIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTC 207 I + + IV +GD + G ++ +ST RE Sbjct: 169 EIWATEKDDTVKIVFSGDLGPQKTVMERTPAVI--------TGADYVVIESTYGDREHKT 220 Query: 208 ISE-KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIA 247 E + + + + K V + TF V R + + Sbjct: 221 NEESREEFQTLMRQILAKKAKVFIPTFV--VDRAQRVAYEL 259 >gi|225680684|gb|EEH18968.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 722 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 92/304 (30%), Gaps = 41/304 (13%) Query: 55 FPDITFIMKERKNLM--AIFITHAHEDHYGALHDLWSFLHVP-VYASPFA---------- 101 ++ + K K A F++H H DH L L P +Y S Sbjct: 7 IVEVDYFRKNPKRPAPLACFLSHVHSDHLQGL----ESLRAPFIYCSAATREILLRLEKR 62 Query: 102 -------IGLLEAKRVYERVSKK----IPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 G+LE++R + + K IP + + NH P + Sbjct: 63 PHRINFSKGILESRRQHYKHLSKLLRPIPLQVPTEIELSPRNHVRVTLFDANH-CPGAVM 121 Query: 151 LVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCA-IGNEGILALMCDSTNAMREGTCIS 209 +I I++TGD + + + + + + +G++ + + D+T A + S Sbjct: 122 FLIEGNGKTILYTGDIRAESWWVGNLIRNPVLIPYTLGDKRLDKIYLDTTFATKSDVYQS 181 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAI 269 + I ++++ + + G + + L S + Sbjct: 182 FPSKAEGIRELLEK------INAYPEDTI----FYLRVWTFGYEDIWLALSSALNTKI-H 230 Query: 270 DVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVI 329 + L+ + + ++ + + G + + R Sbjct: 231 VDQYQIELYKSLTPRATNGFGVDKTAFLCGFTLGNAHAPGCLTDDHKSRIHSCEPDMRCS 290 Query: 330 FSSR 333 S+ Sbjct: 291 TISK 294 >gi|119481915|ref|XP_001260986.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL 181] gi|119409140|gb|EAW19089.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL 181] Length = 848 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 16/170 (9%) Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 A F++H H DHY L W P+Y S L+ + + + Sbjct: 435 AYFLSHYHSDHYMGLTSSWRH--GPIYCSRATANLVRQQLKVDSKWVVDLPFEKKTEVPE 492 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPV--------GNIVHTGDWKLDDDAILG----DV 177 G + + NH P + + + I+H GD++ + Sbjct: 493 TNG-VHVTMIEANH-CPGSAIFLFEKQMGSGPSARVQRILHCGDFRASPTHVQHALLRPE 550 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 D + + I D+T + S++ + + ++ + Sbjct: 551 IDDPTTGQRRQQKIDVCYLDTTYLSPKYAFPSQEDVIEACANLCVSLDQN 600 >gi|327259138|ref|XP_003214395.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Anolis carolinensis] Length = 783 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DENFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQP 331 >gi|228919919|ref|ZP_04083274.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228938322|ref|ZP_04100935.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971200|ref|ZP_04131831.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977809|ref|ZP_04138193.1| Beta-lactamase domain protein [Bacillus thuringiensis Bt407] gi|229177618|ref|ZP_04304995.1| Beta-lactamase domain protein [Bacillus cereus 172560W] gi|228605808|gb|EEK63252.1| Beta-lactamase domain protein [Bacillus cereus 172560W] gi|228781919|gb|EEM30113.1| Beta-lactamase domain protein [Bacillus thuringiensis Bt407] gi|228788527|gb|EEM36475.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821359|gb|EEM67371.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228839735|gb|EEM85021.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|326938830|gb|AEA14726.1| metal-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + VG Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQVGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 165 >gi|198432441|ref|XP_002122832.1| PREDICTED: similar to DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Ciona intestinalis] Length = 868 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 102/322 (31%), Gaps = 50/322 (15%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F+TH H DH L W VY + L++ K +I + Sbjct: 26 FLTHMHSDHTVGLSSRWCHT---VYCTEVTATLMKLKFGISDTYIQIMDDNHTYCLSCGH 82 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL--GDVTDKDSLCAIGNE 189 + + NH P + + I++TGD++ ++ + + Sbjct: 83 TNICVRMIPTNH-CPGACMFLFETDSTRILYTGDFRFNEMVEMEVQKCLNPIR------- 134 Query: 190 GILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 I L D+T S++ NI I ++ +V S + + +A+ Sbjct: 135 PIDLLYLDNTYCEPSCNFPSQQEAVLNIISICRHHIDERIVFGV-SYIGHENLLCLVAKA 193 Query: 250 IGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSAL 309 + + + + L+R++ + + G + + + + P S L Sbjct: 194 LQEYVYVEEAMLERLLLINPEYGKVFRVGMSARLNAV------------------PNSVL 235 Query: 310 AQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSG 369 + V + + S I GN +G I + S Sbjct: 236 NGSQWSAVPTVLIKPTARLG--SMRISGNLSTVGVI----------------TYTIPYSN 277 Query: 370 HPYPNDLKRMYQWIRPQVLVAI 391 H +L++ + ++P + I Sbjct: 278 HSNYQELEKFVKLVKPLKIKPI 299 >gi|260549198|ref|ZP_05823419.1| metallo-beta-lactamase superfamily protein [Acinetobacter sp. RUH2624] gi|260407926|gb|EEX01398.1| metallo-beta-lactamase superfamily protein [Acinetobacter sp. RUH2624] Length = 214 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 33/174 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCG----VSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITH 75 N +L +++ ++ID G V + + G+ + A+++TH Sbjct: 15 NCSLV--WDSETKEAVLIDAGGDAAVLKKEVEALGL---------------KVKALWLTH 57 Query: 76 AHEDHYGALHDLWSFLHVPVYAS----PFAIGLLEAKRVYERVSKKIPCISFQA---GDK 128 H DH GA+ +L VPV F + +++ P Q G+ Sbjct: 58 GHLDHAGAVGELAQEWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEV 117 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + +G E P + + ++ TGD TD Sbjct: 118 LKLGEDEFEVRFAPGHTPGHVMFY--NKNHGLLWTGDVLFKGS---IGRTDFPR 166 >gi|224133910|ref|XP_002321690.1| predicted protein [Populus trichocarpa] gi|222868686|gb|EEF05817.1| predicted protein [Populus trichocarpa] Length = 63 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 4/40 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPK 45 L +P+GG+GEIGMN L G + ++I+ID GV FP+ Sbjct: 28 LRIVPIGGLGEIGMNCMLVG----NFDRYILIDAGVMFPE 63 >gi|119899577|ref|YP_934790.1| RNA procession exonuclease [Azoarcus sp. BH72] gi|119671990|emb|CAL95904.1| exonuclease of the beta-lactamase fold involved in RNA processing [Azoarcus sp. BH72] Length = 238 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG + + +G + I+IDCG+ F + D + A+ Sbjct: 9 GGRDGVTGSCHQLLFG---NGDSILIDCGL-FQGAETAADGRGAEDALAFRMPVSAIRAL 64 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 ++H H DH G + L + P+ S + LL Sbjct: 65 VVSHVHIDHVGRIPWLLAAGFKGPIICSEPSARLL 99 >gi|297616867|ref|YP_003702026.1| Zn-dependent hydrolase including glyoxylase [Syntrophothermus lipocalidus DSM 12680] gi|297144704|gb|ADI01461.1| Zn-dependent hydrolase including glyoxylase [Syntrophothermus lipocalidus DSM 12680] Length = 226 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 52/151 (34%), Gaps = 15/151 (9%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + +++D G V + ++ + + + ++ TH H DH G L+ Sbjct: 28 YLVETGDGMVIVDAGAG------ASVGSIIDNVRELGWPSRKVSSLIATHGHIDHVGGLY 81 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVY------ERVSK---KIPCISFQAGDKVDVGAFSI 136 +L L + V A + +E + K+ + + +++G Sbjct: 82 ELKEKLGLQVIAHELELPAIEEGLSQLTADYLYGLKYRSVKVDLVLREKEAVLEIGGQKF 141 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 + P ++++ + I+ D Sbjct: 142 HCLHTPGHTPGSISVYVDKGGERILFGQDIH 172 >gi|229143795|ref|ZP_04272215.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST24] gi|228639670|gb|EEK96080.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST24] Length = 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SDIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I + + + +G Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQIGT 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|209695108|ref|YP_002263037.1| 3',5'-cyclic-nucleotide phosphodiesterase [Aliivibrio salmonicida LFI1238] gi|208009060|emb|CAQ79292.1| 3',5'-cyclic-nucleotide phosphodiesterase [Aliivibrio salmonicida LFI1238] Length = 330 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 41/223 (18%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCG-----VSFPKDDLPGVDLVFPDIT------F 60 GG+ + N+ + S ++M+D G + + ++ PD + + Sbjct: 34 GGIQD--GNLTAFLIKSDQDSNFVMLDAGSVVNGLIVAEQKGAFKNIDLPDDSPYSKVGY 91 Query: 61 IMKERKNLMAIFITHAHEDHYGAL----HDLWSFLHVPVYASPFA-IGLLEAKRVYERVS 115 ++ + I+H H DH L D P+Y L+ + Sbjct: 92 LLN--DKIKGYLISHGHLDHVAGLIISSPDDSKK---PIYGLEATNRDLMNNYFNWSAWP 146 Query: 116 K-------------KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV- 161 + + + SI ++ ++HS E+ A +++ G++ Sbjct: 147 NFGNKGSGFKINKYNYVDLVPTTWNAISDTTMSIMALPLSHSGGESTAFILKDQKGDVFA 206 Query: 162 HTGDWKLDD----DAILGDVTDKDSLCAIGNEGILALMCDSTN 200 + GD DD A+ T G + + TN Sbjct: 207 YFGDTGPDDVEKSSALKTVWTTLAPFVEQGKLKGIIIEVSFTN 249 >gi|119601889|gb|EAW81483.1| cleavage and polyadenylation specific factor 2, 100kDa, isoform CRA_c [Homo sapiens] Length = 690 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 89/277 (32%), Gaps = 44/277 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DEHFSMDII----DSLRKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQIDAVLLSHP--DPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIV 255 + + V T ++++ I + G + Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY 264 >gi|228966052|ref|ZP_04127118.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] gi|228793655|gb|EEM41192.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] Length = 277 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G +P I+ AI +TH H DH G Sbjct: 41 GNPETNDFVLVDAG-------MPKCANKI--ISIAEDRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G +++ Sbjct: 92 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-NVK 150 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 ++ + ++P I +P H ++ Sbjct: 151 ALPTDGTVPHMPEFRWIHTPGHTPGHISLFR 181 >gi|218896139|ref|YP_002444550.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228964145|ref|ZP_04125268.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|218544692|gb|ACK97086.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228795495|gb|EEM42979.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar sotto str. T04001] Length = 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 28/162 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-----------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 L +P+Y F E I++ + + VG Sbjct: 69 GVLQYARLITSATTRQLPELPIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQVGP 124 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 FSI ++ H + A+ I + G +V++ D + I Sbjct: 125 FSISFLKTVHPVT-CFAMRITAGDGAVVYSADSSYIPEFIPF 165 >gi|75911076|ref|YP_325372.1| beta-lactamase-like protein [Anabaena variabilis ATCC 29413] gi|75704801|gb|ABA24477.1| Beta-lactamase-like protein [Anabaena variabilis ATCC 29413] Length = 555 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 66/461 (14%), Positives = 147/461 (31%), Gaps = 55/461 (11%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK------ERKNL----MA 70 L G I++DCG++ DI+ I K +R N Sbjct: 35 CLLVRMGP----HRILLDCGLA--------------DISSIQKSVTPSAKRGNPPLPADL 76 Query: 71 IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAK-RVYERVSKKIPCISFQAGDK 128 + +THAH DH G L +F ++P+Y S LL C + Sbjct: 77 VLVTHAHPDHARGLLALHQAFPNLPIYGSEVTSKLLPLNWLDRNPQEIPQLCHALPLRSP 136 Query: 129 VDV-GAFSIESVRVNHSIPETMALVIRSPVGN----IVHTGDWKLDDDAILGDVTDKDSL 183 V++ E H +P +A+++ + +++TGD+ L + ++ + L Sbjct: 137 VELQDGLVAEIFPAGH-LPGAVAILLTYTTEHRSYKLLYTGDFFLSNSRLVEGL----RL 191 Query: 184 CAIGNEGILALMCDSTNAMR--EGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIR 241 + + L+ + T E + + I + + + V++ T + + + Sbjct: 192 EELRGIDLNVLIIEGTYGTSRHPHRRNQENQLAERINRAISD-RCSVILPTPALGLGQEL 250 Query: 242 SIIDIAEQIGRKIVLLGSSLKRVVSVAIDVG---IIKKDQLFLSDESFGLYPREQLIVIA 298 ++ + G L V A+ +G ++ + + Sbjct: 251 LMLLRSHHH-----FTGRDLDIWVDGAVAIGCDAYLELLPHLPASVQNFARHQPLFWDER 305 Query: 299 TGSQGEPRSALAQLSRGEMRNVKLAEKDT-VIFSSRAIPGNEVAIGHI-KNRLVEQGVRV 356 + + G+ + L + + + + G + + + V + Sbjct: 306 VRPRVRRLQPENRSIVGKSPCIVLTDSTSDLEQYCQPETGPWLILLPEKIDIKVNKKYSA 365 Query: 357 IAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEGIACVPPV 416 + + H ++ +RPQ +V +HG P +L L + + Sbjct: 366 PTTVESYLL--AQHSDGPGTTQLIHNLRPQHVVFVHGSPAYLADLTCLEELQNRYHIHSP 423 Query: 417 RNGKMLRLFPDPIEIIDEVVHGLFLKDGFLIGKFADLGIAK 457 M+ L + + + +G + I + Sbjct: 424 AAETMVELLIGETFLQPAPPETNYEGELTELGTVITISIPE 464 >gi|71002352|ref|XP_755857.1| DNA repair protein Pso2/Snm1 [Aspergillus fumigatus Af293] gi|66853495|gb|EAL93819.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus Af293] gi|159129914|gb|EDP55028.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus A1163] Length = 850 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 21/191 (10%) Query: 54 VFPDITFIMK--ERKNLMAI---FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 + P+ + + + F++H H DHY L W P+Y S L+ + Sbjct: 416 ILPNFSICVDAFRYGAVEGCNAYFLSHYHSDHYMGLTSSWRH--GPIYCSRATANLVRQQ 473 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV--------GNI 160 + + G + + NH P + + + I Sbjct: 474 LKVDPKWVVDLPFEKKTEVPGTNG-VHVTMIEANH-CPGSAIFLFEKQMGSGPSARVQRI 531 Query: 161 VHTGDWKLDDDAILG----DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKN 216 +H GD++ + D + + I D+T + S++ + + Sbjct: 532 LHCGDFRASPTHVQHVLLRPEVDDPTTGQRRQQKIDVCYLDTTYLSPKYAFPSQEDVIEA 591 Query: 217 IYDIMKNAKGC 227 ++ + Sbjct: 592 CANLCVSLDQN 602 >gi|5031433|gb|AAD38168.1|AF152396_1 beta-lactamase-like protein [Mycobacterium fortuitum] Length = 244 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 10/100 (10%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDL 87 + ++ID G FP D V + + ++ A+ +THAH DH+G L Sbjct: 25 VTDGDRVMLIDAG--FPGQR----DDVIGSVRQLGFAIDDIAAVLLTHAHIDHFGTAIWL 78 Query: 88 WSFLHVPVYASPFAIGLLEAKRV--YERVSKKIPCISFQA 125 PV+ L KR + + +Q Sbjct: 79 AKTRGTPVFCH--TAELGHTKREYLEQAAPADVVRNIWQP 116 >gi|56459703|ref|YP_154984.1| cAMP phosphodiesterase [Idiomarina loihiensis L2TR] gi|56178713|gb|AAV81435.1| Possible cAMP phosphodiesterase, metallo-beta-lactamase superfamily [Idiomarina loihiensis L2TR] Length = 220 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 18/118 (15%) Query: 65 RKNLMAIFITHAHEDHYGALH------DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 + +F+TH+H DH AL L V VYA + L+ + ++ Sbjct: 16 MHQVRHVFLTHSHMDHIAALPTFLSNQYGSEHLPVTVYAQAHTLEKLQNNIFNGDIWPEL 75 Query: 119 PCIS-----------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 ++ G+ +++ I++ V HS+P T+ +++ + V D Sbjct: 76 SSMTEGPEPILKFRKIHPGECIELEGLEIKAFAVEHSVP-TVGYSVKNQGKHFVFAAD 132 >gi|320101558|ref|YP_004177149.1| beta-lactamase domain-containing protein [Isosphaera pallida ATCC 43644] gi|319748840|gb|ADV60600.1| beta-lactamase domain-containing protein [Isosphaera pallida ATCC 43644] Length = 256 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 34/187 (18%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLP---GVDLVFPDITFIMKERKNLMAIFITHAHE 78 +G +W++IDC P + G P + + A+ ITH H Sbjct: 22 YTFGLAVEYDGRWLLIDC--PHPIRKMIHEAGQAAGLP-FD-----LEQVEAVLITHLHA 73 Query: 79 DHYGALH------DLWSFLHVPVYASP----------FAIGLLEAKRVYERV------SK 116 DH + V P A G+ + + Sbjct: 74 DHVSGVEDFGFFNYFALGRRARVVIHPELAGPLWDDLLAAGMGRMRFQAGEPFEPIDRER 133 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 I + G ++ +G F +ES HS+P + + + +GD D + Sbjct: 134 YFETIPLEPGQRLTLGPFEVESHPTTHSLP-CQGYRVTAAGRTLAVSGDTAFDPVLLAWL 192 Query: 177 VTDKDSL 183 + + Sbjct: 193 TCNAHLI 199 >gi|297626352|ref|YP_003688115.1| Beta-lactamase-like [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922117|emb|CBL56685.1| Beta-lactamase-like [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 228 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 48/164 (29%), Gaps = 27/164 (16%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + D G++ D G+D + + L I +TH H D Sbjct: 14 NCYVIADE----------DAGLAVAID--VGMDAARTVEELLAQRDFQLAGILLTHGHID 61 Query: 80 HYGALHDLWSFLHVPVY--------ASPFAIGL-------LEAKRVYERVSKKIPCISFQ 124 H L PV+ + A GL L + + +F+ Sbjct: 62 HCAQAAVLADAHQAPVWVHPADRELMTHPAEGLSPQMAGQLHQLIGDAPLHEPRDLRTFE 121 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 AG V F P ++ L + IV TGD Sbjct: 122 AGVPVRCAGFEFSVTPAPGHTPGSVLLGLEGDEHMIVFTGDVLF 165 >gi|229496718|ref|ZP_04390430.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] gi|229316366|gb|EEN82287.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] Length = 512 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 73/334 (21%) Query: 1 MKNEELV-FLPLG-----GVGEIGMNMALYGYG---------------SPSSRKWIMIDC 39 M+ +E+ LG GV E+G + K I++DC Sbjct: 1 MQKKEIRSVRILGSGTSTGVPEVG--CYCSTCLSTDPADNRTRTSVLLETNEGKKILLDC 58 Query: 40 GVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALHDL----WSFLHV 93 PD I+ E L AI ++H H DH L DL W+ + Sbjct: 59 ---------------SPDFRQQAILAEIDELDAIVLSHEHYDHIAGLDDLRTIAWAR-DL 102 Query: 94 PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSI-----ESVRVNHSIPET 148 P+YA + + + Y ++ + F + E +RV H Sbjct: 103 PIYAENRVLEAIRYRLHYYFGKTPYLGTPRLKLREISLAPFEVEGLTFEPIRVFH----G 158 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCI 208 + +G+ D K D + + G+ L+ + + Sbjct: 159 RLPITGFRIGDFAFITDLKTIPDEEVEKL-----------RGVDTLLVNGLRFTKPH--P 205 Query: 209 SEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 + + I++ I + + S R + + G G L+R+ Sbjct: 206 THQTIEEAIALSKEVQARNTFIIHLSHHAPRAVDLAQTLPE-GVFASYDGLRLERINGRL 264 Query: 269 IDVGIIKK-----DQLFLSDESFGLYPREQLIVI 297 L + P + + Sbjct: 265 EIHNKTNFRASLAPHLPYKFKDCHSIPYAEAYAL 298 >gi|149030435|gb|EDL85472.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform CRA_a [Rattus norvegicus] Length = 541 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 14/161 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL + + + I D+ Sbjct: 28 FLSHMHCDHTVGLSSTWAR---PLYCSPITAHLLHRRLQVSKQWIRALEIGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + NH P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLIDANH-CPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGK------ 137 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVL 229 I L D+TN S + + I +++ + Sbjct: 138 -QIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQHNI 177 >gi|290998549|ref|XP_002681843.1| predicted protein [Naegleria gruberi] gi|284095468|gb|EFC49099.1| predicted protein [Naegleria gruberi] Length = 330 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 109/359 (30%), Gaps = 53/359 (14%) Query: 49 PGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK 108 PG D V + ++ F+TH H DHY L WS +Y + L++ Sbjct: 12 PGTDFVVDGFKY----KQKYNTFFLTHFHSDHYAGLVKTWSHGS--IYCTIPTCNLVK-- 63 Query: 109 RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIR--SPVGNIVHTGDW 166 ++ K + + + + NH P + ++ + +HTGD Sbjct: 64 -KQFGIADKYL-NACEFNKTYEYKGVKFTFLDANH-CPGSSLVLFQVSKTGKAFLHTGDM 120 Query: 167 KLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKG-----IKKNIYDIM 221 + D D SL + + + ++ D+T ++ I + Sbjct: 121 RFDRSK-----IDGISLKGVPKKQLESIFIDTTYCD-PFYTFPKQVEAIDFIADLLESKF 174 Query: 222 KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFL 281 KN LV + + + R ++++ G+K+ + K + +++ + + Sbjct: 175 KNTSKSYLVLIGTYLIGKERIAEGLSKRTGKKVFVTFEKYKTL--ECLELPYFNIFTMNI 232 Query: 282 SDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVA 341 ++ + + + + ++++ + + Sbjct: 233 AETNIHIVNMKDVSWKRLFQIKSSNRNVSEI-------IAIKPSAWCF------------ 273 Query: 342 IGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVA 400 + + V S H +LK + LV H A Sbjct: 274 --------KDMDIPKNGNITLIEVPYSEHSSFTELKDCVETFNYDHLVPTVYNDPHHKA 324 >gi|262037914|ref|ZP_06011339.1| hydroxyacylglutathione hydrolase [Leptotrichia goodfellowii F0264] gi|261748057|gb|EEY35471.1| hydroxyacylglutathione hydrolase [Leptotrichia goodfellowii F0264] Length = 202 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y ++D PG + P I +I ++ NL+A+ +TH H DH + Sbjct: 15 SYVITKGTDCYVVD----------PGGKNMAPVIDYIKEKGLNLVAVLLTHGHFDHIIGI 64 Query: 85 HDLWSFLHVPVYASP 99 + + VPVY S Sbjct: 65 PQIIEYKDVPVYISE 79 >gi|16800312|ref|NP_470580.1| hypothetical protein lin1243 [Listeria innocua Clip11262] gi|16800822|ref|NP_471090.1| hypothetical protein lin1754 [Listeria innocua Clip11262] gi|16413717|emb|CAC96474.1| lin1243 [Listeria innocua Clip11262] gi|16414241|emb|CAC96985.1| lin1754 [Listeria innocua Clip11262] Length = 252 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 27/163 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N E+ + G G N + G ++I+CGV+F D + + F Sbjct: 21 NMEIKTIASGSKG----NAYVISSGRSQ----LLIECGVNF--------DKIRKALNF-- 62 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + A I+H H DH + + + +YAS + L Sbjct: 63 -DLSAVEACLISHEHGDHVAGVKKMLRTSSIKIYASEGTLSAL--------NVPDSRQFI 113 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + D ++G + I + H E + +I+ ++ D Sbjct: 114 LKEKDAQNIGEWIILPFQTEHDAKEPLGFMIQRHNERLLFITD 156 >gi|206889881|ref|YP_002248933.1| metallo-beta-lactamase family protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741819|gb|ACI20876.1| metallo-beta-lactamase family protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 209 Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 27/160 (16%) Query: 16 EIG---MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 E+G +N + +++ ++ID G D P DL+ FI +E NL I Sbjct: 7 EVGPLFVNCYII--YDERTKEAVVIDPG------DEP--DLIL---DFIKEENLNLKYIL 53 Query: 73 ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAK-------RVYERVSKKIPCISFQA 125 TH H DH G++ +L V I + E + P I + Sbjct: 54 CTHGHFDHIGSVKELRDETGAKVVLHEKDIEIYRNSPQIAMQFFGIEIEPQPEPDILIKN 113 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+ ++ G + + + P ++ + TGD Sbjct: 114 GEILNTGNIQLTVIHTSGHSPGSVCFYTDGY----IFTGD 149 >gi|239993422|ref|ZP_04713946.1| exonuclease of the beta-lactamase fold involved in RNA processing-like protein [Alteromonas macleodii ATCC 27126] Length = 376 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 117/337 (34%), Gaps = 58/337 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 +TH H DH A H VYAS + +++ + + G+ V Sbjct: 71 LVTHGHADHARAGHH-------SVYASAETLAIMKTR---YGDDMASQHHAVTLGESVTF 120 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDVTDKDSLCAIGNE 189 + H I + ++I +V +GD+K D +V Sbjct: 121 NDVKVTFFPAGH-ILGSTQILIEYAGYRVVVSGDYKRRHDPTCPPFEVV----------- 168 Query: 190 GILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 L+ ++T + E I K ++ + + C LV ++ + + + +I Sbjct: 169 PCDVLITEATFGLPVFKHPPIEHEIDKLLHSLRVFPERCHLVGAYA--LGKCQRVILALR 226 Query: 249 QIG--RKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPR 306 + G + I L G + ++ + +GI + +SD + ++++ P Sbjct: 227 EAGYEKPIYLHG-AQLKLCDLYEQLGISLGALIPVSDVADKKALAGEIVLA-------PP 278 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 SALA R + + +S ++ R +AE P+ Sbjct: 279 SALA------DRWSRSLPNVRPVMAS---------------GWMQIRARAKQRNAELPLI 317 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKE 403 +S H +L + + + P+ + HG L+ E Sbjct: 318 ISDHCDWPELLQTIEEVNPKEVWVTHGREDALMYQAE 354 >gi|261403021|ref|YP_003247245.1| ribonuclease Z [Methanocaldococcus vulcanius M7] gi|261370014|gb|ACX72763.1| ribonuclease Z [Methanocaldococcus vulcanius M7] Length = 318 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + + DCG + + + F + IFITH H Sbjct: 18 KNRNHIGIAFKFNGEVFLFDCG-----------ENIQRQMLFTEISPMKINHIFITHLHG 66 Query: 79 DHYGALHDLWSFLHV-------PVYASPFAIGLLEAKRVY-----ERVSKKIPCISFQAG 126 DH + L L ++ +++ + K Sbjct: 67 DHILGIPGLLQSLGFFGREKELKIFGPEGTKDIIKNALEFGYNYINYPIKVYEIKEKNPA 126 Query: 127 DKVDVGAFSIESVRVNHSIP 146 + + I + H++P Sbjct: 127 IVLKEDDYEIITYPTKHTVP 146 >gi|160891926|ref|ZP_02072929.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] gi|156858404|gb|EDO51835.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] Length = 196 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 27/180 (15%) Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL---HVPVYASPFAIGLLEAKR------VYERVSK 116 + + + +TH H DH G L DL F +P+Y+ + L A+ Sbjct: 8 EKIDGVLVTHEHYDHVGGLDDLRPFGRFADIPIYSDAYTAAHLRARMPYCFVDKVYPGVP 67 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGD 176 +I +AG + + +RV H + I +G I Sbjct: 68 RIYLQEVEAGQVFHINRTEVLPLRVMHGRLPILGYRIGGRLGYI---------------- 111 Query: 177 VTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKN-AKGCVLVTTFSS 235 TD + E + L NA+R + + I + + + AK + Sbjct: 112 -TDMHMMPEESYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHH 170 >gi|33359267|ref|NP_142252.2| hypothetical protein PH0260 [Pyrococcus horikoshii OT3] Length = 262 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 60/175 (34%), Gaps = 29/175 (16%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITF-IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I+ID G PD+ + + K K + I ITHAH DH L D F + Sbjct: 51 ILIDPG---------------PDLHYHLEKLNKEVETILITHAHFDHIFGLPDAQVFKKL 95 Query: 94 PVYASPFAIGLLE-----AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 + ++P I + A + + + ++ V + V HSI Sbjct: 96 TIASNPLGIKVARSLAMLAFNSEAPLGNDWDYVELKFWNEYKVNGVKVIHFPVVHSIEMA 155 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 +I + TGD + +V D +G L+ + T+ Sbjct: 156 GGFLIERKNKTVAITGDTGP-EIIRDSEVIDL-------IKGSDLLISEMTHKES 202 >gi|296332446|ref|ZP_06874907.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673726|ref|YP_003865398.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150364|gb|EFG91252.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411970|gb|ADM37089.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 244 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 45/225 (20%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S +++DCG + L G P + L A+ ++H H DH + Sbjct: 21 GYLFQSGDYSLLVDCGSAV-LSKLFGY---VP--------AEKLDAVILSHYHHDHIADI 68 Query: 85 HDL--WSFLH---------VPVYASPFAIGLLEAKRVYERVSKKIPC--ISFQAGDKVDV 131 L + +P+Y I +++++ K I+FQ + Sbjct: 69 GPLQFAKQVGSFLGKGEHTLPIYGHDADIE------QFQKLTYKTHTKGIAFQPDQPLTA 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G F+I ++ H + A+ I +V+T D D I +E Sbjct: 123 GPFTITFLKTIHPVT-CYAMRITDGSHTVVYTADSSYQDSFIPF------------SENA 169 Query: 192 LALMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 L+ + A ++GT + + G +L+T Sbjct: 170 DLLISECNFYADQDGTSAGHMNSLEAGRIAKEAGAGELLLTHLPH 214 >gi|228901630|ref|ZP_04065808.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] gi|228858042|gb|EEN02524.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] Length = 277 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G +P I+ AI +TH H DH G Sbjct: 41 GNPETNDFVLVDAG-------MPKCANKI--ISIAEDRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + VPVYA I L Sbjct: 92 IIELIKYWDVPVYAHQMEIPFL 113 >gi|229131992|ref|ZP_04260855.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST196] gi|228651392|gb|EEL07364.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST196] Length = 242 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 19 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 66 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + + Sbjct: 67 GVLQYARLITSVTKGQLPEL--PIYGHSFD----ENGFHSLTHEPHTKGIAYNPEETLQI 120 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 121 GPFSISFLKTVHPVT-CFAMRITAGSDAVVYSADSSYIPEFIPF 163 >gi|268611137|ref|ZP_06144864.1| metallo-beta-lactamase family protein [Ruminococcus flavefaciens FD-1] Length = 211 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 27/181 (14%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GE+ N + + + +D G D + F+ L I + Sbjct: 8 LGELRANCYIVETAP---NRCVAVDIG----GDSRL-------FLEFLKMHNLKLTKILL 53 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKIPCISFQAG 126 TH H DH G ++ VY +L + Y + + Sbjct: 54 THGHFDHIGGCEEVRQATGAEVYVHEDDAPMLTSESLSLASNMAYHPFNPLTDWTVVKGD 113 Query: 127 DKVDVGAFSIESVRV-NHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSL 183 ++ G + + HS I NI+ +GD + + + + Sbjct: 114 CYINDGDCTFRVLHTPGHS--HGSVCYI-CENENIIFSGDTLFCCSVGRTDFYGSSPERM 170 Query: 184 C 184 Sbjct: 171 E 171 >gi|126340452|ref|XP_001369072.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 681 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 103/338 (30%), Gaps = 39/338 (11%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I + Sbjct: 27 RAYFLSHCHKDHMKGLRAPPLKRRLECSLKVHLYCSPVTKELLLTSPKYSFWEKRIIALE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQISLIDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAKGEAA 145 Query: 175 GDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK-GIKKNIYDIMKNAKGCVLVTTF 233 S + + I ++ D+T + I + K I ++++N +T Sbjct: 146 RMEF-LHSGSRV--KDIQSVYLDTTFFDPKFYQIPSRVECLKGILELVRNW-----ITLS 197 Query: 234 SSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQ 293 V ++ G + + S + + V + + R Sbjct: 198 PYHVV----WLNCKAAYGYEYLFTNLSEE--FGTQVHVNKLDMFKNMPDILHHITTDRNT 251 Query: 294 LIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQG 353 I Q E +L G + + I S G ++ Sbjct: 252 QIHACRHPQAEEFFHWNRLPCGIISKTGIPLHVISIKPSTMWFGERTRKTNVI------- 304 Query: 354 VRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V + S H +++ +IRP Sbjct: 305 --VRTGQSSYRACFSFHSSYSEIMDFLSYIRPVNAYPN 340 >gi|116327151|ref|YP_796871.1| Zn-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116119895|gb|ABJ77938.1| Zn-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 384 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 16/156 (10%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA--------K--- 108 ++++ ++ + +THAHE+H G + + S L+VPVYA+ + + K Sbjct: 112 YVVRRSSDIHTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNPENLSIVRKVFI 171 Query: 109 ---RVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + K + D + H+ I + +HT Sbjct: 172 GQPISNDTENMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVF 231 Query: 166 WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 + D D +L N I ++ Sbjct: 232 TSPNRDVSGADW--IRTLQNYCNLNIRTMIGAHGYV 265 >gi|90413205|ref|ZP_01221200.1| anaerobic nitric oxide reductase flavorubredoxin [Photobacterium profundum 3TCK] gi|90325757|gb|EAS42215.1| anaerobic nitric oxide reductase flavorubredoxin [Photobacterium profundum 3TCK] Length = 508 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 37/275 (13%) Query: 51 VDLVFPDITF-----IMKERK--NLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAI 102 +D V ++ + +E + I I HA EDH GAL L S + + P+Y + AI Sbjct: 48 IDTVDHKFSYDFVQQLEQEIDLNEIDLIVINHAEEDHAGALSVLLSKIPNTPIYCTENAI 107 Query: 103 GLLEAKRVYERVSKKIPCISFQAGDKVDVGA---FSIESVRVNHSIPETMALVIRSPVGN 159 + + + GD +D+G + H P++M + Sbjct: 108 DSITG----HHHHPEWNFNVVKTGDSIDIGNGKSLVFIETPMLHW-PDSMMTYMTGDA-- 160 Query: 160 IVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYD 219 ++ + D A D+ + L C A + I++ Sbjct: 161 VLFSND------AFGQHYCDERLFNDEVEQNELMEQCLRYYANILTPFSP--LVTAKIHE 212 Query: 220 IMKNAKGCVLVTTFSSSVSR------IRSIIDIAEQIGRK-IVLLGSSLK---RVVSVAI 269 ++ +V T + R I ++ A + I + S+ R+++ I Sbjct: 213 VLSFNLPVDMVATSHGVIWRDNPTQIIEQYLEWANEYKEDKITIFYDSMSNNTRMMADGI 272 Query: 270 DVGIIKKDQL-FLSDESFGLYPREQLIVIATGSQG 303 GI + D + + + + +++ GS+G Sbjct: 273 AQGITETDPNVAVKIFNVSRHDKNEILTNVFGSKG 307 >gi|83721268|ref|YP_442438.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] gi|167619444|ref|ZP_02388075.1| metallo-beta-lactamase family protein [Burkholderia thailandensis Bt4] gi|257138641|ref|ZP_05586903.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] gi|83655093|gb|ABC39156.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] Length = 258 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + S ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALVVEASSGATTTRVLLDCGFSAKELER--------RLARVGLRV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L AI +TH H DH G L +P+Y S + A V Sbjct: 51 DDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA--DEAGVD----LRVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + VG + V H E + V + D + Sbjct: 105 DETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGM 147 >gi|22023557|gb|AAM89124.1| SNM1-like protein [Rattus norvegicus] Length = 697 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLL----EAKRVYERV---- 114 A F++H H+DH L + L V Y SP LL + K R+ Sbjct: 27 RAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELLLTSPKYKFWENRIIAIE 86 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + +S + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQVSLVDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + +++ + + Sbjct: 145 ------SRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLRGVLELVRS--WI 194 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 T V ++ G + + S + V V V + + Sbjct: 195 TRSPKHVV----WLNCKAAYGYEYLFTNLSEELGVQV--HVDKLDMFKNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E +L G K I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPN 340 >gi|162135927|ref|NP_671486.2| protein artemis [Rattus norvegicus] gi|71153328|sp|Q5XIX3|DCR1C_RAT RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair 1C protein; AltName: Full=SNM1-like protein gi|54035286|gb|AAH83546.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Rattus norvegicus] Length = 698 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLL----EAKRVYERV---- 114 A F++H H+DH L + L V Y SP LL + K R+ Sbjct: 27 RAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELLLTSPKYKFWENRIIAIE 86 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + +S + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQVSLVDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + +++ + + Sbjct: 145 ------SRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLRGVLELVRS--WI 194 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 T V ++ G + + S + V V V + + Sbjct: 195 TRSPKHVV----WLNCKAAYGYEYLFTNLSEELGVQV--HVDKLDMFKNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E +L G K I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPN 340 >gi|332300393|ref|YP_004442314.1| Octanoyltransferase [Porphyromonas asaccharolytica DSM 20707] gi|332177456|gb|AEE13146.1| Octanoyltransferase [Porphyromonas asaccharolytica DSM 20707] Length = 523 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 74/215 (34%), Gaps = 41/215 (19%) Query: 32 RKWIMIDCGVSFPKDDLP-GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS- 89 K I+IDC F + L G+D L AI +TH H DH G L DL + Sbjct: 55 GKRILIDCSADFRQQALLAGIDH--------------LDAIILTHQHYDHIGGLDDLRTI 100 Query: 90 --FLHVPVYASPFAIGLLEAKRVYERVSKKIPC------ISFQAGDKVDVGAFSIESVRV 141 +P+YA P + ++++ Y + P + + + +IE +RV Sbjct: 101 SWRTELPIYAEPNVLEAIKSRLHYYFGPHRYPGTPHLTLHPISSLEPFTLYDLTIEPIRV 160 Query: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNA 201 H ++ +GN D K + L + G+ L + Sbjct: 161 MH----GKQPILGYRIGNFGFLTDLKS---------IAPEELEKL--RGVELLFVNGLRY 205 Query: 202 MREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + + + I++ I + + S Sbjct: 206 TKPH--PTHQTIEEAIELTARVQPQRSYIIHLSHH 238 >gi|291398227|ref|XP_002715463.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Oryctolagus cuniculus] Length = 538 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 98/323 (30%), Gaps = 56/323 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCI---SFQAGDK 128 F++H H DH L W+ P+Y SP LL +R + + + D+ Sbjct: 28 FLSHMHSDHTVGLSSTWAR---PLYCSPITAHLLHRQRQVSKKWIRALEVGESHVLPLDE 84 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGN 188 + ++ + H P ++ + G I++TGD++ + Sbjct: 85 IGQETMTVTLLD-AHHCPGSVMFLFEGYFGTILYTGDFRYTPSMLREPPL-------SSG 136 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + I L D+TN + + I +++ + S + + + +A Sbjct: 137 KQIHTLYLDNTNCNPALVLPTRQEAAHQIVQLIREHPQHNIKIGLYS-LGKESLLEHLAL 195 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSA 308 + +VL L+ V ++ +F +E G + I + Sbjct: 196 ECQTWVVLSPQRLE-------VVQLLGLADVFTVEEKAGRIHAVDNMEICHSAMLRW--- 245 Query: 309 LAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVS 368 + + I +S + S Sbjct: 246 -----NQTHPTIAILPTSRKIHTSHP--------------------------DIHIIPYS 274 Query: 369 GHPYPNDLKRMYQWIRPQVLVAI 391 H ++L+ ++P +V I Sbjct: 275 DHSSYSELRTFVSALKPSQVVPI 297 >gi|220911548|ref|YP_002486857.1| beta-lactamase [Arthrobacter chlorophenolicus A6] gi|219858426|gb|ACL38768.1| beta-lactamase domain protein [Arthrobacter chlorophenolicus A6] Length = 320 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Query: 36 MIDCGV-SFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFL--H 92 ++D G+ S P++ + P + I + +++ I +TH H DH G H LW Sbjct: 29 IVDTGIASSPEEGM------VPALEAIGRRIEDVRWILLTHGHIDHIGGAHALWELTGRR 82 Query: 93 VPVYASPFAIGLLEAKRVY 111 V +L ++R + Sbjct: 83 AKVVIHEADAAMLRSRRAH 101 >gi|282882275|ref|ZP_06290907.1| metallo-beta-lactamase superfamily hydrolase [Peptoniphilus lacrimalis 315-B] gi|281297869|gb|EFA90333.1| metallo-beta-lactamase superfamily hydrolase [Peptoniphilus lacrimalis 315-B] Length = 261 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 23/150 (15%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLMAIFIT 74 N Y I+ID G+S K + G+D + AI +T Sbjct: 12 GNCQFVEY----KNTRILIDAGLSGKKIENNLKSRGID------------PSTIDAILVT 55 Query: 75 HAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H H DH ++ L ++ V+++ +A + F+ + Sbjct: 56 HEHRDHVTSVGVLSRRYNIKVFSNIETA---QAMTPVVKKINSENIYIFENNRAFNFKDL 112 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTG 164 I++ H + VI + T Sbjct: 113 KIKAFDTFHDCQKGCGFVIIGNKKISLLTD 142 >gi|291483499|dbj|BAI84574.1| hypothetical protein BSNT_01740 [Bacillus subtilis subsp. natto BEST195] Length = 244 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S +++DCG + L G P + L A+ ++H H DH + Sbjct: 21 GYLFQSGDYSLLVDCGSAV-LSKLFGY---VP--------AEKLDAVVLSHYHHDHIADI 68 Query: 85 HDL--WSFLH---------VPVYASPFAIGLLEAKRVYERVSKKIPC--ISFQAGDKVDV 131 L + +P+Y I +++++ K I++Q + Sbjct: 69 GPLQFAKQVGSFLGKGEHTLPIYGHDADIE------QFQKLTYKTHTKGIAYQPDQPLTA 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G F+I ++ H + A+ I +V+T D D I Sbjct: 123 GPFTITFLKTIHPVT-CYAMRITDGSHTVVYTADSSYQDSFIPF 165 >gi|3256649|dbj|BAA29332.1| 257aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 257 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 60/175 (34%), Gaps = 29/175 (16%) Query: 35 IMIDCGVSFPKDDLPGVDLVFPDITF-IMKERKNLMAIFITHAHEDHYGALHDLWSFLHV 93 I+ID G PD+ + + K K + I ITHAH DH L D F + Sbjct: 46 ILIDPG---------------PDLHYHLEKLNKEVETILITHAHFDHIFGLPDAQVFKKL 90 Query: 94 PVYASPFAIGLLE-----AKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPET 148 + ++P I + A + + + ++ V + V HSI Sbjct: 91 TIASNPLGIKVARSLAMLAFNSEAPLGNDWDYVELKFWNEYKVNGVKVIHFPVVHSIEMA 150 Query: 149 MALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMR 203 +I + TGD + +V D +G L+ + T+ Sbjct: 151 GGFLIERKNKTVAITGDTGP-EIIRDSEVIDL-------IKGSDLLISEMTHKES 197 >gi|329942585|ref|ZP_08291395.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|332287215|ref|YP_004422116.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|313847809|emb|CBY16800.1| putative metal-dependent hydrolase [Chlamydophila psittaci RD1] gi|325507035|gb|ADZ18673.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|328815495|gb|EGF85483.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|328914463|gb|AEB55296.1| lipoate-protein ligase B [Chlamydophila psittaci 6BC] Length = 273 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 26/106 (24%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHA 76 + L + I+ID G PD + + L +F+TH Sbjct: 44 RSSVLIEWAGKH----ILIDVG---------------PDFRQQMLENNIEKLDGVFLTHP 84 Query: 77 HEDHYGA-----LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 H DH G + + +PV S F L R + + Sbjct: 85 HYDHIGGMDDLRVWYVLHQQSLPVVLSSFTYKYLCKAREHLVLPPD 130 >gi|302334895|ref|YP_003800102.1| beta-lactamase domain protein [Olsenella uli DSM 7084] gi|301318735|gb|ADK67222.1| beta-lactamase domain protein [Olsenella uli DSM 7084] Length = 274 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 23/128 (17%) Query: 35 IMIDCGVSFPK----DDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 I+IDCG+S + GVD+ + A+ +TH H DH + Sbjct: 28 ILIDCGISRRELLRRAGDLGVDM------------GRVSALLLTHEHSDHVAGIPVFAKH 75 Query: 91 LHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMA 150 + A+ + +S + S D DV ++ +H + + M Sbjct: 76 FGGTLVATAGT---VSGSPRLAGLSFDLVGHS----DSFDVAGMHVQCFPTSHDVGDPMG 128 Query: 151 LVIRSPVG 158 Sbjct: 129 FRFSVTGD 136 >gi|290893510|ref|ZP_06556494.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557011|gb|EFD90541.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 243 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 28/167 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D +++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG-DVTDK 180 + ++ H +P A+ I + V+T D D I + D Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAAGKVFVYTADSAYQDSFIPFAECADL 170 >gi|16078088|ref|NP_388905.1| metal-dependent hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|221308862|ref|ZP_03590709.1| hypothetical protein Bsubs1_05686 [Bacillus subtilis subsp. subtilis str. 168] gi|221313186|ref|ZP_03594991.1| hypothetical protein BsubsN3_05617 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318109|ref|ZP_03599403.1| hypothetical protein BsubsJ_05566 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322384|ref|ZP_03603678.1| hypothetical protein BsubsS_05672 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314748|ref|YP_004207035.1| putative metal-dependent hydrolase [Bacillus subtilis BSn5] gi|81555758|sp|O07607|YHFI_BACSU RecName: Full=Uncharacterized protein yhfI gi|2226242|emb|CAA74530.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] gi|2633360|emb|CAB12864.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|320021022|gb|ADV96008.1| putative metal-dependent hydrolase [Bacillus subtilis BSn5] Length = 244 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S +++DCG + L G P + L A+ ++H H DH + Sbjct: 21 GYLFQSGDYSLLVDCGSAV-LSKLFGY---VP--------AEKLDAVVLSHYHHDHIADI 68 Query: 85 HDL--WSFLH---------VPVYASPFAIGLLEAKRVYERVSKKIPC--ISFQAGDKVDV 131 L + +P+Y I +++++ K I++Q + Sbjct: 69 GPLQFAKQVGSFLGKGEHTLPIYGHDADIE------QFQKLTYKTHTKGIAYQPDQPLTA 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G F+I ++ H + A+ I +V+T D D I Sbjct: 123 GPFTITFLKTIHPVT-CYAMRITDGSHTVVYTADSSYQDSFIPF 165 >gi|134298603|ref|YP_001112099.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051303|gb|ABO49274.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 205 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 23/158 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + G +RK +++D P D+ + + K + AI +TH H D Sbjct: 14 NCYII--GCEETRKAVVVD-----PGDEAERIQ------ERLKKLNFKVEAIVLTHGHSD 60 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL------EAKRVYERVSKKIPCISFQAGDKVDVGA 133 H GA+ DL V +L + + E + GD + +G Sbjct: 61 HIGAVGDLQRATAAQVLIHKDDAEMLINPAKNLSTWMGEHMVFNPADRLLVDGDTIQIGN 120 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 ++E + P I G + +GD Sbjct: 121 ITLEVLHTPGHTPGG----ICLKAGKDLFSGDTLFAQS 154 >gi|315498377|ref|YP_004087181.1| RNA procession exonuclease-like protein [Asticcacaulis excentricus CB 48] gi|315416389|gb|ADU13030.1| RNA procession exonuclease-like protein [Asticcacaulis excentricus CB 48] Length = 336 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 115/350 (32%), Gaps = 56/350 (16%) Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP 119 F + + + ITH H DH A H V+A+P + ++ ++ + S+ Sbjct: 22 FFIDPMQPVEVAVITHGHADHARAGHQH-------VFATPETLAIMRSRYGEDHFSE--A 72 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--DDDAILGDV 177 G VD+ + H I + + IV +GD+K D + + Sbjct: 73 EHPLAYGQMVDINGVRLSLHPAGH-ILGSAQARLEYDGSTIVFSGDYKRRADPTCVPFE- 130 Query: 178 TDKDSLCAIGNEGILALMCDSTNAMREGTCIS-EKGIKKNIYDIMKNAKGCVLVTTFSSS 236 + ++T A+ I + + + + C LV ++ Sbjct: 131 ----------PVPCDVFVTEATFALPVFRHPPLADEIARLLASLRQFPDRCHLVGAYA-- 178 Query: 237 VSRIRSIIDIAEQIGR-KIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLI 295 + + + +I G + L +++R+ + +GI ++ E+ + I Sbjct: 179 LGKCQRVICALRAAGYADTLYLHGAMQRLCDLYQSLGIDLGPLAPVTAENARTLAGK--I 236 Query: 296 VIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVR 355 V+ P SAL + R + + +S + R Sbjct: 237 VLC------PPSAL------KDRWSRRLPEVLTAAAS---------------GWMRIRAR 269 Query: 356 VIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELA 405 + E P+ +S H ++L + + + HG LV L Sbjct: 270 AKQKGVELPLVISDHADWDELVETLRDVGAPEVWVTHGRDDALVHQATLM 319 >gi|298481748|ref|ZP_06999938.1| lipoate-protein ligase B [Bacteroides sp. D22] gi|298271970|gb|EFI13541.1| lipoate-protein ligase B [Bacteroides sp. D22] Length = 252 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 45/246 (18%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDIT--FIMKERKNLMAIFITHAHEDHYGALH 85 + I+IDCG PD + + + + ITH H DH G L Sbjct: 40 VETDDARILIDCG---------------PDFRTQVLHLPFERIDGVLITHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG------AFSI 136 DL F VP+YA + L + Y V + P + ++ G + Sbjct: 85 DLRPFCRFGSVPIYAEDYVAQGLRLRMPYCFVDHRYPGVPDIPLQEISAGQSFSINHTEV 144 Query: 137 ESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMC 196 +RV H ++ +G + + D + + L GI L+ Sbjct: 145 LPLRVMH----GRLPILGYRIGQLGYITD------MLTMPEESYEQLA-----GIDVLVM 189 Query: 197 DSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVL 256 NA+R + + + +++ + + S + + + ++ + Sbjct: 190 ---NALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHDMG-LHAEVEKNLPENIHLAF 245 Query: 257 LGSSLK 262 G + Sbjct: 246 DGLDIY 251 >gi|325983348|ref|YP_004295750.1| hydroxyacylglutathione hydrolase [Nitrosomonas sp. AL212] gi|325532867|gb|ADZ27588.1| hydroxyacylglutathione hydrolase [Nitrosomonas sp. AL212] Length = 257 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 12/63 (19%) Query: 36 MIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV 95 +ID G + P + ++ ++ AI ITH H DH G + +L + +PV Sbjct: 26 IIDPGTA------------VPVMEYLRLKKLQPRAILITHHHSDHIGGVAELLQWFDIPV 73 Query: 96 YAS 98 Y Sbjct: 74 YGP 76 >gi|240140970|ref|YP_002965450.1| putative metallo-hydrolase/oxidoreductase, beta-lactamase domain protein [Methylobacterium extorquens AM1] gi|240010947|gb|ACS42173.1| putative metallo-hydrolase/oxidoreductase, beta-lactamase domain protein [Methylobacterium extorquens AM1] Length = 299 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N+ G R W+++D G+ P E AI +TH H D Sbjct: 42 NVVFVGSPGAGDRNWVLVDAGI--PGSKAAIRSAAAARFG----EGARPAAIVLTHGHFD 95 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H G L DL PVYA Sbjct: 96 HVGVLEDLAEEWDTPVYAHGL 116 >gi|218898177|ref|YP_002446588.1| metal-dependent hydrolase [Bacillus cereus G9842] gi|218543388|gb|ACK95782.1| metal-dependent hydrolase [Bacillus cereus G9842] Length = 281 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ + + I+ AI +TH H DH G Sbjct: 45 GNPETNDFVLVDAGMPKCANKI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G +++ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-NVK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 ++ + ++P I +P H ++ Sbjct: 155 ALPTDGTVPHMPEFRWIHTPGHTPGHISLFR 185 >gi|315037332|ref|YP_004030900.1| hypothetical protein LA2_00525 [Lactobacillus amylovorus GRL 1112] gi|325955800|ref|YP_004286410.1| hypothetical protein LAC30SC_00395 [Lactobacillus acidophilus 30SC] gi|312275465|gb|ADQ58105.1| hypothetical protein LA2_00525 [Lactobacillus amylovorus GRL 1112] gi|325332365|gb|ADZ06273.1| hypothetical protein LAC30SC_00395 [Lactobacillus acidophilus 30SC] gi|327182637|gb|AEA31084.1| hypothetical protein LAB52_00485 [Lactobacillus amylovorus GRL 1118] Length = 265 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 26/170 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N +L G + I++D G+S K GVD+ Sbjct: 1 MKVSVLASGSTG----NTSLIVTG----QHKILMDAGLSGKKTKDLLADVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 ++ F++H H DH G L L + +A+ L + ++ + Sbjct: 47 ------NDIDMAFLSHDHTDHSGGLGVLMRRYPRIDAFANSGTWQYLLDTQKIGKLPAE- 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + G G + + +H E V S + D Sbjct: 100 QMNTIEPGQTKTFGDLDVMAFATSHDAAEPQYYVFTSGGKRVAFLTDTGY 149 >gi|224535484|ref|ZP_03676023.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] gi|224522898|gb|EEF92003.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] Length = 215 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 68/218 (31%), Gaps = 38/218 (17%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + I+IDCG F ++ + V + + + ITH H DH G L DL Sbjct: 3 TDDAVILIDCGPDF-REQMLRV-----------ASFEKIDGVLITHEHYDHVGGLDDLRP 50 Query: 90 FLH---VPVYASPFAIGLLEAKRVYERVSKKIPCI------SFQAGDKVDVGAFSIESVR 140 F +P+Y+ + L A+ Y + K P + + G + I + Sbjct: 51 FCRFGEIPIYSDDYTATHLRARMPYCFLEHKYPGVPQIFLQEVEPGKNFFINHTEIIPFQ 110 Query: 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTN 200 V H + I + + D + + D D L N Sbjct: 111 VMHGRLPILGYRI---GKRLAYITDMLTMPEESYEQLQDLDVL--------------VVN 153 Query: 201 AMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 A+R + + I + + + S Sbjct: 154 ALRVKPHPTHQSISEALETAKRIGARETYFIHMSHHAG 191 >gi|167581367|ref|ZP_02374241.1| metallo-beta-lactamase family protein [Burkholderia thailandensis TXDOH] Length = 258 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 52/163 (31%), Gaps = 16/163 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N + S ++ +++DCG S + + + + Sbjct: 1 MRFASLGSGSE--GNALVVEASSGATTTRVLLDCGFSAKELER--------RLARVGLRV 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 +L AI +TH H DH G L +P+Y S + A V Sbjct: 51 DDLDAILVTHEHGDHVGCALTLARRASLPLYTSWGTARAVGA--DEAGVD----LRVLWG 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + VG + V H E + + D + Sbjct: 105 DETAAVGDLCVLPYTVPHDAREPLQFAFSDGATRLGVLTDVGM 147 >gi|317491482|ref|ZP_07949918.1| metallo-beta-lactamase superfamily protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921029|gb|EFV42352.1| metallo-beta-lactamase superfamily protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 215 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 40/142 (28%), Gaps = 26/142 (18%) Query: 71 IFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVD 130 I +TH H DH GA L L+VP+Y + + Sbjct: 52 ILLTHGHLDHVGAAGQLAKSLNVPIYGPQ---------------EDDLFWLEGLPAQSKM 96 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD-SLCAIGNE 189 G + + + + + L + + + H +++ L +G+ Sbjct: 97 FGFTNCDPLTPTRWLNDGDTLQVGNQTLQVFHC----PGHTPGHVIFFNEESRLAQVGD- 151 Query: 190 GILALMCDSTNAMREGTCISEK 211 + S R + Sbjct: 152 -----VLFSGGVGRSDFPRGDH 168 >gi|229823672|ref|ZP_04449741.1| hypothetical protein GCWU000282_00973 [Catonella morbi ATCC 51271] gi|229786909|gb|EEP23023.1| hypothetical protein GCWU000282_00973 [Catonella morbi ATCC 51271] Length = 227 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 23/155 (14%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + E N + + ++ID P D P + + +I AI Sbjct: 17 GSLEE---NTYAV---VNEAGQALLID-----PGADAPKI------LDWIESRGWAPQAI 59 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL---EAKR---VYERVSKKIPCISFQA 125 +THAH DH GA+ + +P+Y P G L E + + + + ++ Sbjct: 60 LLTHAHHDHIGAVDAVRDRYGIPLYMHPVESGFLNQPELNLSAYWGQPFTARPAEVLWED 119 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 +V F + V V P +A + + Sbjct: 120 LGDKEVAGFHFKVVFVPGHSPGHVAYIFADDHFVL 154 >gi|50539828|ref|NP_001002384.1| cleavage and polyadenylation specificity factor subunit 2 [Danio rerio] gi|49903850|gb|AAH76029.1| Cleavage and polyadenylation specific factor 2 [Danio rerio] Length = 790 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 116/362 (32%), Gaps = 68/362 (18%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + + Sbjct: 5 IKLTALSGVQE----ESALCYLLQVDEFRFLLDCGW----DETFSMDII----DSLKRYV 52 Query: 66 KNLMAIFITHAHEDHY--GALHDLWSFL--HVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H DH GAL L + +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DHVHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDV-------------GAFSIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 ++ D+ I + +SL L+ DS NA ++ ++ + ++ Sbjct: 171 IYGVDFN-HKREIHLNGCSLESLSR-----PSLLITDSFNASYVQPRRKQRD-EQLLTNV 223 Query: 221 MK--NAKGCVLVTTFSS----SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGII 274 M+ G VL+ ++ ++++ I + G + + ++ Sbjct: 224 METLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALL 269 Query: 275 KKDQLFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSS 332 + + S ++L+ + P + ++ V+ S Sbjct: 270 NNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLCS 329 Query: 333 RA 334 + Sbjct: 330 QP 331 >gi|25026690|ref|NP_736744.1| hypothetical protein CE0134 [Corynebacterium efficiens YS-314] gi|259508176|ref|ZP_05751076.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23491969|dbj|BAC16944.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164265|gb|EEW48819.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 247 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 36/115 (31%), Gaps = 10/115 (8%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L ++D G+ P D V + + ++ A+ +THAH D Sbjct: 19 NCWLIE----DDEGLTLVDAGL--PGTWRHLQDAV----HTLGYQLDDITALVLTHAHFD 68 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 H G L +PVYA L Y S + +G Sbjct: 69 HVGMARRLIRQTGLPVYAHSRDHELAAHPFRYAHESPIVRYPLRYPKALTVLGPM 123 >gi|289548991|ref|YP_003473979.1| beta-lactamase [Thermocrinis albus DSM 14484] gi|289182608|gb|ADC89852.1| beta-lactamase domain protein [Thermocrinis albus DSM 14484] Length = 212 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 25/162 (15%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + +P+G + +N +L S + +++D G + L +L E Sbjct: 3 IKVIPVGLLS---VNCSLL--VDEESGEVLLVDPG---AESHLLMREL----------EG 44 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE-------AKRVYERVSKKI 118 + I TH H DH G + L L VP Y P I L K++ ++ Sbjct: 45 LKPVGIVATHGHIDHVGQVKTLKELLDVPFYMHPLDIPLSNDPIWPGFDKQIGAQLPCPP 104 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNI 160 P + + G ++ +G ++ + P L I Sbjct: 105 PDVYLEDGMRIKLGKKTLRVLHTPGHTPGLCCLYAEEEGVLI 146 >gi|257094296|ref|YP_003167937.1| beta-lactamase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046820|gb|ACV36008.1| beta-lactamase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 225 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 L +G+ ++ +ID G D + +I + + + +TH H DH Sbjct: 29 YLVHFGNVAA----LIDAGCGRAT------DRLLQNIEAAGVSPEQIRHLLLTHCHYDHS 78 Query: 82 GALHDLWSFLHVPVYASPFAIGLLE--------AKRVYERVSKKIPCISFQAGDKVDVGA 133 GA DL PV LE A + ++ I GD+ +G Sbjct: 79 GAAADLRQRFGWPVAIHALEAAYLENGDNQVSAASWYGDHLAPCPVDIRIADGDRFSLGD 138 Query: 134 FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 SI+++ + P ++A ++ S +V D Sbjct: 139 RSIQAIHIPGHSPGSLAYLVESEGRRVVFAQDVH 172 >gi|168186921|ref|ZP_02621556.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] gi|169295165|gb|EDS77298.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] Length = 240 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 25/163 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L L G G N L + ++++CG+ + + + F Sbjct: 1 MKLKVLGSGSSG----NCYLL----QGKEETLILECGLPY--------KTILKGLNF--- 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + N++ +TH H+DH A +DL + VY S +E + +++ Sbjct: 42 KIGNVVGCLVTHEHKDHSKAANDLIRN-GIDVYLSQGTAAGIE----FIDINRSHRIHEI 96 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVG-NIVHTGD 165 ++ +G F I + H E + +I ++ D Sbjct: 97 KSEKVFKIGEFIILPFKTEHDANEPLGFLIYHKDIGQVLFITD 139 >gi|254457216|ref|ZP_05070644.1| ribonuclease Z [Campylobacterales bacterium GD 1] gi|207086008|gb|EDZ63292.1| ribonuclease Z [Campylobacterales bacterium GD 1] Length = 315 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 21/148 (14%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N++ G+ KW + DCG + L + + L IFITH H Sbjct: 17 RNVSALGFELDQDNKWYLFDCGEATQHQLLH---------SHLS--VAKLDTIFITHLHG 65 Query: 79 DHYGALHDLW--SFLHV---P--VYASPFAIGLLEAKR--VYERVSKKIPCISFQAGDKV 129 DHY L L L P +Y LE E++ K+ + F++GD+ Sbjct: 66 DHYYGLPGLISSKKLDTCFKPLSIYGPVGIRKFLECSVGTSEEKLGFKLDIVEFKSGDEF 125 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPV 157 FS++ + + HSI ++ A I+ Sbjct: 126 KFDKFSLKVLPLVHSI-DSFAFYIKEDD 152 >gi|229816589|ref|ZP_04446888.1| hypothetical protein COLINT_03647 [Collinsella intestinalis DSM 13280] gi|229807924|gb|EEP43727.1| hypothetical protein COLINT_03647 [Collinsella intestinalis DSM 13280] Length = 294 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 28/176 (15%) Query: 13 GVGEIGMNMALYGYGSPSSRKWIMIDCGVS----FPKDDLPGVDLVFPDITFIMKERKNL 68 G G G N AL IMID G + + G+D +++ Sbjct: 33 GSGSRG-NCALVE----GPEGLIMIDNGFARCKVLDRMHELGLD------------ERDV 75 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDK 128 A+ +TH H DH + + ++AS + + + +F GD Sbjct: 76 RALILTHEHTDHVSGISVWVKIFNGLLFASEGTVD-------GRKYLSCLDFETFTPGDA 128 Query: 129 VDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLC 184 ++V IE+ +H + + I + D + + + D L Sbjct: 129 LEVAGVRIETFPTSHDVVNPVGFRFSCAGDAIGYATDTGMLPPRAMELLADARILA 184 >gi|197120481|ref|YP_002132432.1| mRNA 3'-end processing factor [Anaeromyxobacter sp. K] gi|196170330|gb|ACG71303.1| putative mRNA 3'-end processing factor [Anaeromyxobacter sp. K] Length = 330 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 62/192 (32%), Gaps = 26/192 (13%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + F++HAH DH G + A+ + L+ + +K + Sbjct: 27 RVECAFVSHAHGDHIG-------RHDRTI-ATAPTLALMRHRLGE-GKRRKTEHLPASYR 77 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 +G ++E H + + + + ++ ++GD + + Sbjct: 78 SPFGLGELTLELFPAGH-VLGSAQVRVTRNGVSLGYSGDLCTEPTHAAER-------AEV 129 Query: 187 GNEGILALMCDSTNAMREGTCISE----KGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRS 242 G L+ +ST + +++ + D + + VL+ + + + Sbjct: 130 M--GCDVLVIESTFGHPRYVFPPKDQTLAAVRRFVDDALADGVTPVLLGYA---LGKAQE 184 Query: 243 IIDIAEQIGRKI 254 I+ +G Sbjct: 185 ILKYLSDLGYAC 196 >gi|332530842|ref|ZP_08406768.1| beta-lactamase-like protein [Hylemonella gracilis ATCC 19624] gi|332039754|gb|EGI76154.1| beta-lactamase-like protein [Hylemonella gracilis ATCC 19624] Length = 294 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 83/262 (31%), Gaps = 45/262 (17%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAH 77 G N I++D G +FP +M + IFITH+H Sbjct: 23 GGNTTCIE-VRTDEDDIIILDAGTG-----------IFPLSQSLMTRQPVHANIFITHSH 70 Query: 78 EDHYGALHDLWSFL---HV--------PVYASPFAIGLLEAKRV-------YERVSKKIP 119 DH L +V PV + ++ + + ++ Sbjct: 71 WDHIQGLPFFIPNFVAGNVLRLHGAYDPV-SGQGVEQVMSVQLQYSYFPVREAELRGRVE 129 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL--------DDD 171 ++ + V VG+ +I +NH + I S ++ TGD + D + Sbjct: 130 YVTLTPDESVRVGSATITPCLLNHPVIN-YGYRIESNGKSVFFTGDHEPPYNIYQPGDLE 188 Query: 172 AILGDVTDKDSLCAI--GNEGILALMCDSTN--AMREGTCISEKGIKKNIYDIMKNAKGC 227 D AI G +G+ L+ D++ A G + +D A G Sbjct: 189 YAEYQHHVNDRDAAIVRGMQGVDVLIIDTSYTAAEYPSKIGWGHGTYASSFDYASRA-GA 247 Query: 228 VLVTTFSSSVSRIRSIIDIAEQ 249 ++ +R ++ + Sbjct: 248 KVLYCTHHEPTRSDDALEAVFR 269 >gi|293400661|ref|ZP_06644806.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305687|gb|EFE46931.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 202 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 18/146 (12%) Query: 26 YGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 Y + ++ID G I K + I +THAH DH + Sbjct: 17 YLLWNDDHVLVIDPGSK-----------SLRLQEAIDKRNGIVDGIVLTHAHFDHIAGVD 65 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVGAFSIESVRVN 142 L + H P+Y + I LL ++ + I + + +G F+ + Sbjct: 66 TLVNKYHCPLYMNDLDIPLLTDPQLNFSIGDPIIVHTKAQVLTPGEHTIGKFTFRYIDAP 125 Query: 143 HSIPETMALVIRSPVGNIVHTGDWKL 168 L+ + + GD Sbjct: 126 GHSEGCSMLL----WDDHLFCGDVLF 147 >gi|54303081|ref|YP_133074.1| putative nuclease [Photobacterium profundum SS9] gi|46916509|emb|CAG23274.1| putative nuclease [Photobacterium profundum SS9] Length = 465 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 56/280 (20%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 G + + + + I++DCG +++ + + F + K+ Sbjct: 4 IQSFGAAETVTGSCHFLQLKNGPN---ILVDCGYFQGENE----EQTYAPFDF---DPKD 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLE------AKRVYE-------- 112 + + +THAH DH G + L V A + L E AK E Sbjct: 54 VDIVLLTHAHLDHVGRVPKLVKEGFDGKVVALRATMDLAEVILMDSAKIAEEDYKTALKK 113 Query: 113 --------------------RVSKKIPCISFQAGDKVDVGA-FSIESVRVNHSIPETMAL 151 + + + + + H I + + Sbjct: 114 AKRTGYEKRVPPPIYTSDDAKAVFDLIIQYADYNKAIQLVPGVKVTFRNAGH-ILGSATI 172 Query: 152 VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEK 211 I + + D + + S + AL +ST R+ + E Sbjct: 173 QIEVSEEGYTKSLVFSGDLGSRRDIIMTPPSFV----KKADALYIESTYGDRDHRPLKET 228 Query: 212 --GIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 K+ I + +KN +G VL+ +F+ + R + ++ + +Q Sbjct: 229 IDECKEIIINTLKN-QGNVLIPSFA--IERTQEVLLLIKQ 265 >gi|301052733|ref|YP_003790944.1| metal-dependent hydrolase [Bacillus anthracis CI] gi|300374902|gb|ADK03806.1| conserved hypothetical metal-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|291297370|ref|YP_003508768.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290472329|gb|ADD29748.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 204 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 17/99 (17%) Query: 9 LPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL 68 L +G + E N L + +++D G D PG + ++ + Sbjct: 6 LAVGPLQE---NTYLL---VAEDGRGVIVDPG------DEPG--RILAEVQRV---GLKP 48 Query: 69 MAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 AI +THAH DH GA+ L L +PVY P + L + Sbjct: 49 EAILLTHAHFDHVGAVAPLVEALRLPVYLHPADLPLYRS 87 >gi|83953632|ref|ZP_00962353.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] gi|83841577|gb|EAP80746.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] Length = 338 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 40/307 (13%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + + ++DCG P+ D ++ A+FITH H DH G Sbjct: 5 TGNRRWLLDCGFG-PEAHAHF------DPRWLKGA----DAVFITHDHIDHIGGAIYAVE 53 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +P+YA+ L + + + R H++ Sbjct: 54 A-GLPIYATAQTAKAL---------PPAAKVNLLPEQGVSVIDGVQLTTGRNGHAMGGVW 103 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + ++GDW D A + D R Sbjct: 104 MHFALGEG--LFYSGDWSE---ESDWFPLDLPPPAATAILDCSYQLDDVPQTER------ 152 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-RSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 + ++ +G VL+ S R + + + G V+L + V++ Sbjct: 153 ----FAALDALLDRLEGQVLLPVPPS--GRAGEMALHLIRRYGHASVMLDPECQAVLATG 206 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + G + D ++ P ++ + + A R + +L V Sbjct: 207 LRSGTLGVDAAKIAPL-LARGPLDEARFLVCDTPNADGGAAWGYVRAWHESGRLGRDAHV 265 Query: 329 IFSSRAI 335 +F+ Sbjct: 266 VFTGHMT 272 >gi|281211444|gb|EFA85608.1| DNA repair metallo-beta-lactamase domain-containing protein [Polysphondylium pallidum PN500] Length = 423 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 15/167 (8%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY + W F P+Y S L+ K + + + Sbjct: 244 FLSHFHSDHYTGITKTWKF--GPIYCSFETGKLVYTKL----GVDSEYIKAMPWNTFMKI 297 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 ++ + NH P + +HTGD++ + D L I + Sbjct: 298 ENVNVAILDANH-CPGAAMFLFCVDGEYTLHTGDFRY-----NSKMADYPLLRDI---KL 348 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 L D+T + ++ I + + DI+ + F + Sbjct: 349 TRLYLDNTFCDPQYVFPPQQQIVREVADIVARENDGRTLFLFGEDIV 395 >gi|228913771|ref|ZP_04077396.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228932482|ref|ZP_04095363.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827172|gb|EEM72925.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228845710|gb|EEM90736.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDIVVYSADSSYIPEFIPF 165 >gi|157325335|ref|YP_001468755.1| gp51 [Listeria phage B054] gi|300765832|ref|ZP_07075806.1| hypothetical protein LMHG_12468 [Listeria monocytogenes FSL N1-017] gi|66733340|gb|AAY53156.1| gp51 [Listeria phage B054] gi|300513409|gb|EFK40482.1| hypothetical protein LMHG_12468 [Listeria monocytogenes FSL N1-017] Length = 245 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 N E+ + G G N + G R ++++CG++F D + + F Sbjct: 14 NMEIKTIASGSKG----NAYVISSG----RSKLLLECGINF--------DKIRKALNF-- 55 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + + A I+H H DH + + + +YAS + L Sbjct: 56 -DLSAVEACLISHEHGDHVAGVKKMLRTSSIKIYASEGTLSAL--------NVPDSRQFI 106 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + ++G + I + H E + +I+ ++ D Sbjct: 107 LKEKNAQNIGEWIILPFQTEHDAKEPLGFMIQRNNERLLFITD 149 >gi|304316997|ref|YP_003852142.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778499|gb|ADL69058.1| beta-lactamase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 210 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 20/146 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + S + +M+D G+ + + +I K +L I +TH H D Sbjct: 18 NCYVLSI--KDSNECVMVDPGIPAKEIE-----------NYIEKNNLSLKYILVTHGHFD 64 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLL---EAKRVY---ERVSKKIPCISFQAGDKVDVGA 133 H G + + V S LL +++ K I D + + Sbjct: 65 HIGGVDFFRDRFNAKVCISADDSVLLSDTRLNLSEISFKKIVVKNADILLNDDDTLKLNN 124 Query: 134 -FSIESVRVNHSIPETMALVIRSPVG 158 +I + P + + Sbjct: 125 DITISVIHTPGHTPGGLCYKVDGVCF 150 >gi|220906224|ref|YP_002481535.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7425] gi|219862835|gb|ACL43174.1| beta-lactamase domain protein [Cyanothece sp. PCC 7425] Length = 584 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 51/242 (21%) Query: 21 MALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMA---------- 70 L G I++DCG++ VD++ P + + Sbjct: 19 CLLVRMGPYR----ILLDCGLN-------QVDVLLP----PEQRSSQPKSGQRSPGQRGG 63 Query: 71 ----------IFITHAHEDHY-GALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK-I 118 + +HAH DH G L +F +P+YAS LL ++ Sbjct: 64 GQRGDLPADLVLCSHAHADHARGLLALHRAFPRLPIYASEVTTQLLPLNWPEIPAAQFLP 123 Query: 119 PCISFQAGDKVDVGA-FSIESVRVNHSIPETMALVIRS----------PVGNIVHTGDWK 167 C + ++ G +++ H +P A ++ V + +TGD+ Sbjct: 124 FCQALPWRSPIEFGDGLTVKLFPAGH-LPGATAFLLTYTPSSQRGKPERVYTVFYTGDFF 182 Query: 168 LDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGC 227 L + + + + L + + +L + A E + + I +K Sbjct: 183 LSNSRL-VEGFPLEELRSTAPD-VLIVEGSFGTARHPHRRQQENQLAERITQALKQGFSV 240 Query: 228 VL 229 VL Sbjct: 241 VL 242 >gi|261404790|ref|YP_003241031.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261281253|gb|ACX63224.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 273 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER--KNLMAIFITHAHED 79 + G+P + W++ID G+ + I + R K +AI +TH H D Sbjct: 30 NVQMIGTPGTGDWVLIDTGLGNFEGS----------IAEEAENRFGKPPVAIVLTHGHFD 79 Query: 80 HYGALHDLWSFLHVPVYASP 99 H G + +L +VPVYA P Sbjct: 80 HVGNVKELADRWNVPVYAHP 99 >gi|254303289|ref|ZP_04970647.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323481|gb|EDK88731.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 260 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 77/251 (30%), Gaps = 25/251 (9%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG G N +++D G S K + + I K+ Sbjct: 1 MKISILGSGS--GGNSTFVEI----EDYKLLVDTGFSCKKTEE--------KLEKIGKKL 46 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 ++ AI ITH H DH + +P+Y +P + K ++F Sbjct: 47 SDISAILITHEHSDHINGAGVIARKYDIPIYITPESYRAGAVKLGE----IDKSLLNFID 102 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDSLC 184 GD + + V H T+ + + I + D + + D D++ Sbjct: 103 GDFILNDKVKVSPFDVMHDAERTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMV 162 Query: 185 AIGNEGILALMCDS------TNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 N LM S +S K I ++ + V + S + Sbjct: 163 IESNYDFNTLMNCSYPWNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKDSN 222 Query: 239 RIRSIIDIAEQ 249 I I + E Sbjct: 223 NISLIKETLED 233 >gi|311705699|gb|ADQ01115.1| artemis [Cercopithecus wolfi] Length = 692 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 107/341 (31%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWEKRIISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQISLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAQGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + I++ + + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLSGILELVRSWITR 196 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + + ++ G + + S + V V V + + Sbjct: 197 SPYHT------VWLNCKAAYGYEYLFTNLSEELGVQV--HVNKLDMFRNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E ++L G ++ I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K ++ P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPN 340 >gi|116872328|ref|YP_849109.1| metal-dependent beta-lactamase superfamily III protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741206|emb|CAK20328.1| metal-dependent beta-lactamase superfamily III protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 243 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 34/191 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEDGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D +++G F Sbjct: 69 GILQHIRLLSQREDKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGD------WKLDDDAILGDVTDKDSLCAI-G 187 I ++ H +P A+ I + V+T D + D VTD + + G Sbjct: 125 KITFLKTIHPVP-CYAMRIEAGEKVFVYTADSAYQDSFIPFADKADLLVTDTNFFHDLAG 183 Query: 188 NEGILALMCDS 198 + + Sbjct: 184 KTKVHMASTEV 194 >gi|229166028|ref|ZP_04293792.1| Beta-lactamase domain protein [Bacillus cereus AH621] gi|228617439|gb|EEK74500.1| Beta-lactamase domain protein [Bacillus cereus AH621] Length = 242 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 19 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 66 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 67 GVLQYARLIMSGAKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQV 120 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 121 GPFSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 163 >gi|319901721|ref|YP_004161449.1| hydrolase [Bacteroides helcogenes P 36-108] gi|319416752|gb|ADV43863.1| putative hydrolase [Bacteroides helcogenes P 36-108] Length = 254 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 59/167 (35%), Gaps = 42/167 (25%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 +L L G GV EIG ++ P + I+IDCG Sbjct: 1 MKLRILGSGTSTGVPEIGCTCSVCASADPRDNRLRASSLLHTDDAVILIDCG-------- 52 Query: 49 PGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAI 102 PD M + + + ITH H DH G L DL F +PVY+ + Sbjct: 53 -------PDFREQMLRMLSFEKIDGVLITHEHYDHVGGLDDLRPFCRFGEIPVYSDTYTA 105 Query: 103 GLLEAKRVYERVSKKIPCI------SFQAGDKVDVGAFSIESVRVNH 143 L A+ Y V K P + +AG V I VR+ H Sbjct: 106 THLRARMPYCFVDKVYPGVPRIYLWEVEAGIPFYVHHTEIMPVRIMH 152 >gi|256391401|ref|YP_003112965.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357627|gb|ACU71124.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 246 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 22/174 (12%) Query: 6 LVFLPLGGVGEI-GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE 64 + LGG G + A G+ +++D G + LP + + P Sbjct: 1 MRVTVLGGSGAFPTADSACSGFLLHHDGFSLLVDAGYAV----LPRLLELMP-------- 48 Query: 65 RKNLMAIFITHAHEDHYGALHDLWSFL--------HVPVYASPFAIGLLEAKRVYERVSK 116 + L A++I+H H DH L+ L +PVYA P A+ + A + Sbjct: 49 AEQLDAVYISHGHPDHCADLNPLLRARAFGGADPDPLPVYAPPRALDAVLALDRPGMLDA 108 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 + F+ G VG F + + + H +P A+ + + ++V+TGD D Sbjct: 109 ALTRHDFEPGAAFSVGPFELRTALLPHWLPNA-AVRVAAGGHSVVYTGDGGPDP 161 >gi|212550576|ref|YP_002308893.1| hypothetical protein CFPG_219 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548814|dbj|BAG83482.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 260 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 77/269 (28%), Gaps = 67/269 (24%) Query: 4 EELVFLPLG---GVGEIGMNMAL------------YGYGSPSSRKWIMIDCGVSFPKDDL 48 ++ FL G G E+G N + ++I+IDCG Sbjct: 1 MKIRFLGTGTSTGNPEVGCNCVVCLSEDKKDKRFRSSVLVEIESRYILIDCG-------- 52 Query: 49 PGVDLVFPDI------TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLH----VPVYAS 98 PD TF K L + ITH H DH G L DL F V +Y Sbjct: 53 -------PDFYRQILETFKKKTFDRLDGVLITHEHYDHVGGLDDLRCFTRNRRIVNIYTD 105 Query: 99 PFAIGLLEAKR---------VYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 + L+ + Y + + D+ I + + H + Sbjct: 106 YYTSIKLKERLPYIFNYNEQQYPGIPNLRIHSIKKNESFFDISGIKIIPINLLHGRKPIL 165 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 I +TD ++ E + L NA+RE + + Sbjct: 166 GYRIDKFA------------------YLTDLKTIPDSEFEKLKGLSVLVINALREKSHAT 207 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 IK+ + I +T Sbjct: 208 HANIKEALKYIDIIKPDQAYLTHICHDFG 236 >gi|92117437|ref|YP_577166.1| RNA-metabolising metallo-beta-lactamase [Nitrobacter hamburgensis X14] gi|91800331|gb|ABE62706.1| RNA-metabolising metallo-beta-lactamase [Nitrobacter hamburgensis X14] Length = 532 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 10/99 (10%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 G + + + + S ++DCG+ F +L + T ++ + Sbjct: 9 GAARTVTGSCYHFKTPTGS----FLVDCGL-FQGQKTLK-EL---NYTAFPFRPADIDVV 59 Query: 72 FITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKR 109 +THAH DH G L L + A+ I L Sbjct: 60 LLTHAHIDHSGLLPKLVREGFRGRILATRGTIDLCSYML 98 >gi|25028320|ref|NP_738374.1| hypothetical protein CE1764 [Corynebacterium efficiens YS-314] gi|259507375|ref|ZP_05750275.1| Zn-dependent hydrolase [Corynebacterium efficiens YS-314] gi|23493605|dbj|BAC18574.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165000|gb|EEW49554.1| Zn-dependent hydrolase [Corynebacterium efficiens YS-314] Length = 214 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 51/178 (28%), Gaps = 30/178 (16%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + + +ID G+ DLV +I + + I +TH H D Sbjct: 14 NCYVV----VGDGEVAIIDPGMHTHD------DLV----EYITTNKLTVDKIVLTHGHID 59 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAK----------RVYERVSKKIPCISFQAGDKV 129 H + + PVY P + LEA + + I G+ + Sbjct: 60 HTRDAGVVARRFNAPVYIHPDDVFFLEAYKGSGTRTAMLFDADNMLSPESTIDLVDGETI 119 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 + P LV +GD + D++++ Sbjct: 120 TLAGEEFTLRHAPGHSPGCTMLV----GREYCFSGDVLFKGSIGRTDFEFADEEAMTR 173 >gi|206968065|ref|ZP_03229021.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228951550|ref|ZP_04113655.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068743|ref|ZP_04202040.1| Beta-lactamase domain protein [Bacillus cereus F65185] gi|206736985|gb|EDZ54132.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228714360|gb|EEL66238.1| Beta-lactamase domain protein [Bacillus cereus F65185] gi|228808115|gb|EEM54629.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLIMSGAKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPEFIPF 165 >gi|312880416|ref|ZP_07740216.1| beta-lactamase domain protein [Aminomonas paucivorans DSM 12260] gi|310783707|gb|EFQ24105.1| beta-lactamase domain protein [Aminomonas paucivorans DSM 12260] Length = 209 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 23/168 (13%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 E+ PLG + G L ++D P + V F+ Sbjct: 1 MEIKRFPLGALWTNG---YLV---WDEGGHAFLVD-----PGGEASEVRA------FLED 43 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL------EAKRVYERVSKK 117 + L I +TH H DH G L + V +L + + E +S Sbjct: 44 KGLTLEWIVLTHGHGDHIGGLPQMRPLSRCGVAIHRGDADMLLEPGKNLSTFMGEPLSFD 103 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G+++ VG+ ++ + P + L++ ++ GD Sbjct: 104 PAERILADGEELAVGSLTVRVIHTPGHTPGGICLLVTEGEERVLFAGD 151 >gi|262370033|ref|ZP_06063360.1| beta-lactamase domain-containing protein [Acinetobacter johnsonii SH046] gi|262315072|gb|EEY96112.1| beta-lactamase domain-containing protein [Acinetobacter johnsonii SH046] Length = 214 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ S++ I+ID G + + + I + A+++TH H D Sbjct: 15 NCSIV--WDSDSKEAILIDAG---GEPEKLKAE--------IEALGLTVKALWLTHGHLD 61 Query: 80 HYGALHDLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVG 132 H GA+ L VPV F + +++ G+ + +G Sbjct: 62 HAGAVGALKKLWDVPVIGPHKEDAFWLDMIQEVSQRYGFPIPEKVDVTTWLEGGEVLKLG 121 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 + E P + + ++ TGD TD Sbjct: 122 NEAFEVRFAPGHTPGHVMFY--NKNYGLLWTGDVLFKGS---IGRTDFPR 166 >gi|315281626|ref|ZP_07870215.1| metal-dependent beta-lactamase superfamily III protein [Listeria marthii FSL S4-120] gi|313614731|gb|EFR88286.1| metal-dependent beta-lactamase superfamily III protein [Listeria marthii FSL S4-120] Length = 243 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 31/163 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKR--VYERVSKKIPCISFQAGDKVDVG 132 G L L S +P+Y E KR + ++ I ++A D +++G Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHK------EDKRGYSFLEMAGVTKAIEYKADDTLEIG 122 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 F + ++ H +P A+ I + V+T D D I Sbjct: 123 PFKVTFLKTVHPVP-CYAMRIEAGGKVFVYTADSAYQDSFIPF 164 >gi|303256632|ref|ZP_07342646.1| metallo-beta-lactamase family protein [Burkholderiales bacterium 1_1_47] gi|302860123|gb|EFL83200.1| metallo-beta-lactamase family protein [Burkholderiales bacterium 1_1_47] Length = 208 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 23/161 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLG + N + + + + ID G P ++ + Sbjct: 7 VAVFPLGPLE---TNCYIV----SNEGQAVAIDVG---GDPA--------PVSKYLKEHG 48 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVS-----KKIPC 120 L AI ITH H DH + L + H VY + S K Sbjct: 49 LELKAICITHMHFDHLYGVAALAAETHATVYTPEKDKVIASTVLGQGGSSGFPAVPKFES 108 Query: 121 ISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIV 161 +S + G+K + + + V P ++A + V Sbjct: 109 VSIEPGNKTEFAGLECKVLSVPGHTPGSVAYYFKKEKCVFV 149 >gi|293376409|ref|ZP_06622643.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] gi|325839313|ref|ZP_08166779.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] gi|292644965|gb|EFF63041.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] gi|325490595|gb|EGC92910.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] Length = 262 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 23/159 (14%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDITFIMKERKNLM 69 G +G N + + I+ID G+S K G D + Sbjct: 8 SGSVG-NATIIE----TENTAILIDNGLSLKKLQELIKKSGFD------------ENKIK 50 Query: 70 AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKV 129 IFITH H DH + + V A+ I E R + + Sbjct: 51 HIFITHEHGDHIKGVGVCTRKWKLNVCATAKTID--EMHRKAIIKPGVEKTTILEKNEWA 108 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + I R +H + + +I+ +V+ D Sbjct: 109 EFDDLMIMPFRTSHDAVDPVGYMIKKDEKVLVYITDTGY 147 >gi|228908865|ref|ZP_04072696.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 200] gi|228850732|gb|EEM95555.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 200] Length = 186 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 41 GNPETNDFVLVDAGMPKCANEI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 91 Query: 84 LHDLWSFLHVPVYASPFAIGLL 105 + +L + +PVYA I L Sbjct: 92 IIELIKYWDIPVYAHQMEIPFL 113 >gi|90415177|ref|ZP_01223123.1| putative nuclease [Photobacterium profundum 3TCK] gi|90323695|gb|EAS40330.1| putative nuclease [Photobacterium profundum 3TCK] Length = 155 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 11/105 (10%) Query: 8 FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67 G + + + + I++DCG +++ + + F + K+ Sbjct: 4 IQSFGAAETVTGSCHFLQLKNGPN---ILVDCGYFQGENE----EQTYAPFDF---DPKD 53 Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVY 111 + + +THAH DH G + L V A + L E + Sbjct: 54 VDIVLLTHAHLDHVGRVPKLVKEGFDGKVVALRATMDLAEVILMD 98 >gi|304408481|ref|ZP_07390124.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304342540|gb|EFM08391.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 213 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 31/159 (19%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M + LG + N L + + I+ID G+ Sbjct: 1 MAKLNIQTFQLGPLQ---TNCYLL--TDEAGERGIIIDPGMQ---------------PKR 40 Query: 61 IMKERKNLM--AIFITHAHEDHYGALHDLWSFLHVPVYASPFAIG-LLEAKRVYERVSKK 117 +++ N+ AI +THAH DH G + ++ PVY L A+ K Sbjct: 41 LLERIANIEIEAIVLTHAHFDHMGGVDEVRKAKGCPVYIHDLEADWLTNAQLNGSGRWKD 100 Query: 118 IPC--------ISFQAGDKVDVGAFSIESVRVNHSIPET 148 + + G + + P + Sbjct: 101 VTPPLTTDPAEYALDEGQTLSFIGHQFSVMHTPGHSPGS 139 >gi|150402080|ref|YP_001329374.1| ribonuclease Z [Methanococcus maripaludis C7] gi|166991485|sp|A6VFJ7|RNZ_METM7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150033110|gb|ABR65223.1| ribonuclease Z [Methanococcus maripaludis C7] Length = 310 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 23/134 (17%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 + + DCG ++ + +F D++ + + IFI+H H DH + Sbjct: 21 SISLKFDGEIFLFDCG----ENTQRQI--IFTDVSPM-----KINNIFISHLHGDHILGI 69 Query: 85 HDLWSFL-------HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQ-----AGDKVDVG 132 L + + +Y ++E S P ++ + Sbjct: 70 PGLMQSIAFQGRTKPLNIYGPKETAKMIENILNVGYHSIDYPINVYEISAKSPEKIISSD 129 Query: 133 AFSIESVRVNHSIP 146 + + S V HS+P Sbjct: 130 NYEVFSFPVVHSVP 143 >gi|282882037|ref|ZP_06290678.1| metallo-beta-lactamase family protein [Peptoniphilus lacrimalis 315-B] gi|281298067|gb|EFA90522.1| metallo-beta-lactamase family protein [Peptoniphilus lacrimalis 315-B] Length = 208 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 17/105 (16%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 +++++ L +G + E N + + ++ID G + +D + Sbjct: 2 DKKIIRLTVGPLQE---NCYIV---YNKENECVIIDPG----YESQRIIDTI-------E 44 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEA 107 KE+ + I +TH H DH GA+ DL + VY +LE Sbjct: 45 KEKLKPLYILLTHGHIDHIGAVKDLKDKYGISVYIHNKDKDMLEK 89 >gi|196044377|ref|ZP_03111613.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196025016|gb|EDX63687.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I + + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIPYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGNDAVVYSADSSYIPEFIPF 165 >gi|47095741|ref|ZP_00233347.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254899132|ref|ZP_05259056.1| hypothetical protein LmonJ_04949 [Listeria monocytogenes J0161] gi|254912727|ref|ZP_05262739.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] gi|254937054|ref|ZP_05268751.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|47015884|gb|EAL06811.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258609657|gb|EEW22265.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|293590722|gb|EFF99056.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] Length = 205 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +++D P D+ ++ + +A+ +TH H D Sbjct: 15 NCYII----YQDNVALIVD-----PGDEASKIEAEIAKLEV------KPVAVLLTHCHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H GAL ++ ++PVY SP Sbjct: 60 HIGALEEIRKTYNIPVYVSPL 80 >gi|209967053|ref|YP_002299968.1| metallo-beta-lactamase, putative [Rhodospirillum centenum SW] gi|209960519|gb|ACJ01156.1| metallo-beta-lactamase, putative [Rhodospirillum centenum SW] Length = 530 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 14/109 (12%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVD-LVFP-DITFIMKERKNLM 69 G G + + L +G S ++DCG+ + ++ FP D + I Sbjct: 11 GAAGGVTGSCFLVEHGGGS----FLVDCGMFQGSKTVRELNWRPFPFDPSSIGT------ 60 Query: 70 AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEAKRVYERVSKK 117 + +THAH DH G + L V+ + LL ++ Sbjct: 61 -MLLTHAHIDHSGLIPKLVKAGFTGRVHCTRATADLLAYMLPDSGFIQE 108 >gi|118475392|ref|YP_892238.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] gi|118414618|gb|ABK83038.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] Length = 196 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 4/114 (3%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 ++ K KN +AI TH H DH + + +P+Y L E + Sbjct: 34 FEWVSKVCKNPLAILNTHGHFDHIYDDNAIRDKFKIPIYIPKDDAFLCEQDPFTYLQTTF 93 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD 171 P + +++G+F P + I ++ +GD+ + Sbjct: 94 KPDFLVEDNQIIEIGSFKFTFHHFAGHTPGCSMIEIGD----VMFSGDFIFKNS 143 >gi|83942412|ref|ZP_00954873.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] gi|83846505|gb|EAP84381.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] Length = 338 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 40/307 (13%) Query: 30 SSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 + + ++DCG P+ D ++ A+FITH H DH G Sbjct: 5 TGNRRWLLDCGFG-PEAHAHF------DPRWLKGA----DAVFITHDHIDHIGGAIYAVE 53 Query: 90 FLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 +P+YA+ L + + + R H++ Sbjct: 54 A-GLPIYATAQTAKAL---------PPAAKVNLLPERGVSVIDGVQLTTGRNGHAMGGVW 103 Query: 150 ALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCIS 209 + ++GDW D A + D R Sbjct: 104 MHFALGEG--LFYSGDWSE---ESDWFPLDLPPPAATAILDCSYQLDDVPQTER------ 152 Query: 210 EKGIKKNIYDIMKNAKGCVLVTTFSSSVSRI-RSIIDIAEQIGRKIVLLGSSLKRVVSVA 268 + ++ +G VL+ S R + + + G V+L + V++ Sbjct: 153 ----FAALDALLDRLEGQVLLPVPPS--GRAGEMALHLIRRYGHASVMLDPECQAVLATG 206 Query: 269 IDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTV 328 + G + D ++ P ++ + + A R + +L V Sbjct: 207 LRSGTLGVDAAKIAPL-LARGPLDEARFLVCDTPNADGGAAWGYVRAWHESGRLGRDAHV 265 Query: 329 IFSSRAI 335 +F+ Sbjct: 266 VFTGHMT 272 >gi|294101434|ref|YP_003553292.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] gi|293616414|gb|ADE56568.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] Length = 270 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 15/88 (17%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFI 73 +GE G++M + + R ++ D G ++P+ + + NL I + Sbjct: 17 LGEHGLSMYI-----ETPRGSLLFDTGRGAS---------LYPNASALEVPLGNLNGIVL 62 Query: 74 THAHEDHYGALHDLWSF-LHVPVYASPF 100 +H H DH L ++ ++PV+ASPF Sbjct: 63 SHGHFDHTWGLPEILRREGNLPVWASPF 90 >gi|94496393|ref|ZP_01302970.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] gi|94424139|gb|EAT09163.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] Length = 263 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 22/178 (12%) Query: 68 LMAIFITHAHEDHYGALHD---LWSFLHVPV--YASPFAIGLLEAKRV---YERVSKKIP 119 + AI TH H DH L D L+ PV YA + LL+ + R Sbjct: 69 IDAILWTHDHADHCHGLDDVRQLYHHRGTPVPGYARAQTLKLLKQRFAYAFEGRQGYHPT 128 Query: 120 CISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTD 179 + D + +G I V H + +I + D+ + Sbjct: 129 IAACPLHDSLQIGDIDISCVDQPHGAIYSTGFRFSHDGKSIGYATDFHV---------IT 179 Query: 180 KDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV 237 + L + + + D+ + + + I G ++T S+ Sbjct: 180 PEMLALY--DQVDIWVVDALR-EKPHPTHPH--LAMTLEGIAAARPGRAILTHMDQSM 232 >gi|125973129|ref|YP_001037039.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum ATCC 27405] gi|125713354|gb|ABN51846.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum ATCC 27405] Length = 541 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 15/146 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMK 63 + LG + + ++ ++DCG+ + K++ + + F Sbjct: 1 MKITFLGAAKTVTGSCFFVE----TASTKFLVDCGMFQGYSKNNALNEE----EFPF--- 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + L IF+THAH DH G + ++ + A+ + L ++ Sbjct: 50 NVEELDYIFLTHAHIDHSGRIPRIYIKGFRGQIIATKATVELCAIMLPDSGHIQE-YENE 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPET 148 + ++ G +E + Sbjct: 109 WTNRKRLRAGKPPVEPLYTYQDAVNC 134 >gi|237785611|ref|YP_002906316.1| hypothetical protein ckrop_1020 [Corynebacterium kroppenstedtii DSM 44385] gi|237758523|gb|ACR17773.1| hypothetical protein ckrop_1020 [Corynebacterium kroppenstedtii DSM 44385] Length = 221 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 24/147 (16%) Query: 8 FLPL-GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERK 66 L GG E+ N+ + G + I+ID P P VD V + Sbjct: 26 VFALDGGEWEVDNNIWVIG----DDSECIIIDA----PHTADPIVDAVA---------GR 68 Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAG 126 + I THAH DH +L L ++ P L +E+ + + G Sbjct: 69 TVKGIVCTHAHNDHITVAPELAEKLDTRIFVHPGDQML------WEQTHPGVAHEELEDG 122 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVI 153 ++ + ++ + P + L + Sbjct: 123 EQFSIADTAMSVINTPGHSPGSCCLYL 149 >gi|229078390|ref|ZP_04210953.1| Beta-lactamase domain protein [Bacillus cereus Rock4-2] gi|228704931|gb|EEL57354.1| Beta-lactamase domain protein [Bacillus cereus Rock4-2] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 69 GVLQYARLIMSGAKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRIAAGDDAVVYSADSSYIPEFIPF 165 >gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis] Length = 1506 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 105/355 (29%), Gaps = 62/355 (17%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + A F+THAH DHY L D WS +Y S L+ R Sbjct: 35 VKAYFLTHAHSDHYNGLRDDWSR--GVIYCSHVTARLIAHMLGVGRRW----LHPLPLDS 88 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPV-GNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + + V NH P + + R P +HTGD + + L Sbjct: 89 PTMIQGVEVTLVSANH-CPGAVQFLFRLPDGRRFIHTGDMRFSPALLANPH-----LQQF 142 Query: 187 GNEGILALMCDSTNAM-REGTCISEKGIKKNIYDIM------------------------ 221 G AL D+T R E+ I+ I Sbjct: 143 RRVGCDALFLDTTYCNPRYCFPPQEESIEYVASTIQRLLQEDAEQQQQESQGEGREPGAR 202 Query: 222 --KNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQL 279 + + L++T+ RI + + ++ G ++ + +V + + D Sbjct: 203 QRRPFRRLYLISTYGIGKERILTAVH--DRCGVRLHVADRK----HAVMQQLDLPGYDPS 256 Query: 280 FLSDESFGLYPREQL---IVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIP 336 L G P + + T P + R E + + Sbjct: 257 QLFTTDRGSTPVHVVQWGFLGETWPYFRPNFVSQEALRQE-------------LGAEEVV 303 Query: 337 GNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 G + R V+ + V S H ++L+ +++RP +V Sbjct: 304 GFVPTGWLYEMRKETFAVKRKGACSVHLVPYSEHNSFDELREYVRFLRPLQVVPT 358 >gi|329904397|ref|ZP_08273791.1| Putative Metallo-beta-lactamase family protein [Oxalobacteraceae bacterium IMCC9480] gi|327548001|gb|EGF32740.1| Putative Metallo-beta-lactamase family protein [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 53/160 (33%), Gaps = 16/160 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + F LG E N L S +R +M+DCG S + + + I Sbjct: 1 MKFASLGSGSE--GNALLITAASGMTRTTVMLDCGFSVKETER--------RMARIGMAA 50 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA 125 L AI ITH H DH HVPV+ S + + K + + Sbjct: 51 AELSAIVITHEHSDHVSGALKFARRYHVPVWLSYGTFQAV------QGDCKGVDVRFCRD 104 Query: 126 GDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 G + +G + V H E + V + D Sbjct: 105 GIAIPIGDLELMPYTVPHDAREPVQYVASDGRMRLGVLTD 144 >gi|228984270|ref|ZP_04144451.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775387|gb|EEM23772.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 244 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY + +++DCG GV +I ++ A+ ++H H DH + Sbjct: 21 GYLFEHNGFRLLVDCGS--------GVLAQI--QKYIA--PSHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFNSLTHEPHTKGIAYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|56420531|ref|YP_147849.1| hypothetical protein GK1996 [Geobacillus kaustophilus HTA426] gi|261420211|ref|YP_003253893.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|297529822|ref|YP_003671097.1| beta-lactamase [Geobacillus sp. C56-T3] gi|319767022|ref|YP_004132523.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|56380373|dbj|BAD76281.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|261376668|gb|ACX79411.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|297253074|gb|ADI26520.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] gi|317111888|gb|ADU94380.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 324 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 4/91 (4%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 +Y Y + W ++D G +P+ + + + +++ AI+ITH H DH+ Sbjct: 26 YVYCYVGRETDGWSIVDVGFRYPEA----IRAWEAVFRQLGIKPRHVRAIYITHFHPDHF 81 Query: 82 GALHDLWSFLHVPVYASPFAIGLLEAKRVYE 112 G + PV+ S + E E Sbjct: 82 GLAGWMQQQTEAPVWISEPDYAMAERVWGEE 112 >gi|256003924|ref|ZP_05428910.1| RNA-metabolizing metallo-beta-lactamase [Clostridium thermocellum DSM 2360] gi|281417321|ref|ZP_06248341.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum JW20] gi|255992052|gb|EEU02148.1| RNA-metabolizing metallo-beta-lactamase [Clostridium thermocellum DSM 2360] gi|281408723|gb|EFB38981.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum JW20] gi|316940645|gb|ADU74679.1| RNA-metabolising metallo-beta-lactamase [Clostridium thermocellum DSM 1313] Length = 541 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 15/146 (10%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGV--SFPKDDLPGVDLVFPDITFIMK 63 + LG + + ++ ++DCG+ + K++ + + F Sbjct: 1 MKITFLGAAKTVTGSCFFVE----TASTKFLVDCGMFQGYSKNNALNEE----EFPF--- 49 Query: 64 ERKNLMAIFITHAHEDHYGALHDLW-SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS 122 + L IF+THAH DH G + ++ + A+ + L ++ Sbjct: 50 NVEELDYIFLTHAHIDHSGRIPRIYIKGFRGQIIATKATVELCAIMLPDSGHIQE-YENE 108 Query: 123 FQAGDKVDVGAFSIESVRVNHSIPET 148 + ++ G +E + Sbjct: 109 WTNRKRLRAGKPPVEPLYTYQDAVNC 134 >gi|161899193|ref|XP_001712823.1| Ysh1 3' mRNA end processing factor [Bigelowiella natans] gi|75756316|gb|ABA27211.1| Ysh1 3' mRNA end processing factor [Bigelowiella natans] Length = 544 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 39/211 (18%) Query: 2 KNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFI 61 + + L LGG +IG + ++D G+ ++ + F+ Sbjct: 3 SDSIVKILQLGGTFQIGNSC----IYVMIKNTIFILDIGIIRSDKYWMHLESI----NFL 54 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFLHVPV--------YASPFAIGL--------- 104 K K L I+H H DH G+L + ++ V Y++ L Sbjct: 55 KKITKPLN-FLISHYHLDHIGSLPLILNYGSDKVFFLLKNLSYSTYLTKLLFFYNSKEFL 113 Query: 105 -LEAKRVYERVSKKIPCISFQAGDKVD-------VGAFSIESVRVNHSIPETMALVIRSP 156 K + ++ + + V G HS+ + + + S Sbjct: 114 NFTDKLKIKSFNQDDIEMVMELIISVKENTVKMLRGNNIATFFNSGHSL-GSSCINLNSL 172 Query: 157 VGNIVHTGDWKLDDD----AILGDVTDKDSL 183 ++++TGD+ +D + + D L Sbjct: 173 SFSLLYTGDYSKNDSLVLKGVSYYDFNFDLL 203 >gi|256849371|ref|ZP_05554804.1| beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] gi|262047876|ref|ZP_06020824.1| beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|293380066|ref|ZP_06626162.1| metallo-beta-lactamase domain protein [Lactobacillus crispatus 214-1] gi|312977017|ref|ZP_07788766.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus crispatus CTV-05] gi|256714147|gb|EEU29135.1| beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] gi|260571820|gb|EEX28393.1| beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|290923380|gb|EFE00287.1| metallo-beta-lactamase domain protein [Lactobacillus crispatus 214-1] gi|310896345|gb|EFQ45410.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus crispatus CTV-05] Length = 265 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 55/170 (32%), Gaps = 26/170 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N +L G + I++D G+S K GVD+ Sbjct: 1 MKVSVLASGSTG----NTSLIVTG----QHKILMDAGISGKKTKDLLAEVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + F++H H DH G L L + +A+ L + ++ + Sbjct: 47 ------NEIDMAFLSHDHTDHSGGLGVLMRRYPKIDAFANSGTWQYLLDTKKIGKLPAE- 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + G G I + +H E V S + D Sbjct: 100 QMNTIEPGQTKTFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDTGY 149 >gi|295691939|ref|YP_003600549.1| metallo-beta-lactamase family protein [Lactobacillus crispatus ST1] gi|295030045|emb|CBL49524.1| Metallo-beta-lactamase family protein [Lactobacillus crispatus ST1] Length = 265 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 55/170 (32%), Gaps = 26/170 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N +L G + I++D G+S K GVD+ Sbjct: 1 MKVSVLASGSTG----NTSLIVTG----QHKILMDAGLSGKKTKDLLAEVGVDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + F++H H DH G L L + +A+ L + ++ + Sbjct: 47 ------DEIDMAFLSHDHTDHSGGLGVLMRRYPKIDAFANSGTWQYLLDTQKIGKLPAE- 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + + G G I + +H E V S + D Sbjct: 100 QINTIEPGQTKTFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDTGY 149 >gi|261367131|ref|ZP_05980014.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282571254|gb|EFB76789.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 201 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 8/108 (7%) Query: 58 ITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKK 117 + + KE L I +TH H DH GA+ L VY P ++K Sbjct: 39 LDALEKENAQLTHILLTHGHYDHVGAVAALRKATGCKVYMDPVDAAGS----QMLPLTKD 94 Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + ++ A D + + P ++ L+ G ++ +GD Sbjct: 95 LVDENWPADDTLRIDELMFTIYHTPGHTPGSVCLL----CGQVMFSGD 138 >gi|331269252|ref|YP_004395744.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329125802|gb|AEB75747.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 201 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 31/156 (19%) Query: 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFP--DITFIMKERKN----LMAI 71 G N I+ID ++ + G ++ P D + + I Sbjct: 12 GANCY------------ILID------EETMVGC-IIDPGGDADRLANIIDEFNIEVKFI 52 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER--VSKKIPCISFQAGDKV 129 +TH H DH + L +VPVY + L+E +K + G+ + Sbjct: 53 LLTHGHMDHVEGVEILRQKYNVPVYINGKDKELMEKGTEVFGRIWNKTSEDKELKDGEML 112 Query: 130 DVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 +G I+ + P M+ ++ + +V TGD Sbjct: 113 KLGNLDIKCMETPGHTPGGMSFLVNN----VVFTGD 144 >gi|110759553|ref|XP_001122361.1| PREDICTED: protein artemis-like isoform 1 [Apis mellifera] gi|328781177|ref|XP_003249933.1| PREDICTED: protein artemis-like isoform 2 [Apis mellifera] Length = 392 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 78/232 (33%), Gaps = 16/232 (6%) Query: 72 FITHAHEDHYGALHDLW----SFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 F++H H DH L D++ + +Y SP LLE + ++ K I+ Sbjct: 30 FLSHCHSDHMHGLSDMFFEHIDEYNKYLYCSPITKALLENRFKFKTSCVKEIDINSPTVI 89 Query: 128 KVDVGA-----FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL-----GDV 177 + + + + H P ++ + +I++TGD++++ Sbjct: 90 EYSIKNEDKILICVTCIPAGH-CPGSVMFLFEKNNISILYTGDFRINPKDFPKLKSLHYY 148 Query: 178 TDKDSL-CAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS 236 D + + + + + S + + I + + V++ S+ Sbjct: 149 NDSKLIPKSFTKIYLDTTFLSTDFSSFPTRQESVFKMYEVIKNWISKDPRNVVILECSAM 208 Query: 237 VSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGL 288 +++++ + KI + + +A + D S + Sbjct: 209 YGSEFLFVELSKMLNMKIHVRSDVFETYCRIAQLSCYVTNDPYSTSIHACKK 260 >gi|282848919|ref|ZP_06258309.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] gi|282581424|gb|EFB86817.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] Length = 198 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 27/194 (13%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + K I+ID G +D + D I A+ +TH H D Sbjct: 14 NCYVL----IKEGKSIIIDPGFH----SNHIID-MIADSEPI--------AVLLTHGHCD 56 Query: 80 HYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQA--GDKVDVGAFSIE 137 H AL ++ + ++P Y P LL+ R V KK ++++ F I Sbjct: 57 HVSALDEVCTHYNIPAYLHPLDQELLQLIRRRPSVYKKKMYTHCNDLVEGQLNLDPFDIL 116 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCAIGNEGILALM 195 ++ L I + TGD + +D L I + L + Sbjct: 117 VHHTPGHSAGSVCLEIGGY----LFTGDTLFKQNVGNTDNYKSDPADL--IKSLKYLLTL 170 Query: 196 CDSTNAMREGTCIS 209 + Sbjct: 171 SKDLIVEPGHREST 184 >gi|302340156|ref|YP_003805362.1| beta-lactamase [Spirochaeta smaragdinae DSM 11293] gi|301637341|gb|ADK82768.1| beta-lactamase domain protein [Spirochaeta smaragdinae DSM 11293] Length = 265 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 30/210 (14%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWS-FLHVPV--YASPFAIGLLEAKR-------V 110 + + ++ A+F THAH DH L DL + P+ Y S + + + Sbjct: 66 LREGIAHIDAVFYTHAHADHLHGLDDLRPLSFNGPIPLYGSAETMDEIRRRFSYIFSSGQ 125 Query: 111 YERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDD 170 K+ D + +G+ + + + H V +G + D + Sbjct: 126 EGGGKPKVLLKPIGPEDHITIGSLEVIPIPLLH----GSLPVFGYRIGPFAYLTDCNIIP 181 Query: 171 DAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + L EGI ++ D A+R + + + + K Sbjct: 182 EYS------YELL-----EGIRFVVID---ALRPEPHPTHFSFGQALEAVRKIGAEKAWF 227 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSS 260 T + V I G + G S Sbjct: 228 THLTHDVD--HEDIRRMLPTGVEPAWDGLS 255 >gi|269968201|ref|ZP_06182232.1| hypothetical protein VMC_36620 [Vibrio alginolyticus 40B] gi|269827199|gb|EEZ81502.1| hypothetical protein VMC_36620 [Vibrio alginolyticus 40B] Length = 279 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 17/214 (7%) Query: 23 LYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG 82 + Y + ++ID + FP + ++L + + K + I +TH H DH G Sbjct: 53 VSSYAIATDDGLVIIDT-LDFPYSEWIPINL-----EKLGLKDKPITHILVTHGHSDHVG 106 Query: 83 ALHDLWSFLHVPVYASPFAIGL-LEAKRV---YERVSKKIPCISFQAGDKVDVGAFSIES 138 L V + A L ++ + I ++ + +G + Sbjct: 107 GAQLLQEKYGSKVVMTKSAHELSIQQSNKSEGENKFLPPNLDIEIKSDSSMAIGGHEFKF 166 Query: 139 VRVNHSIPETMALVIRSPVGNIVHTGDW-------KLDDDAILGDVTDKDSLCAIGNEGI 191 +L + D + I +T + + I + Sbjct: 167 YLTPGHTEGDYSLDFTVEDNGEQYRAFIVGGHSVSSNDPEVIGQFLTSMEKIRKISLQAP 226 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAK 225 + + S + + + K + + + A Sbjct: 227 IVNVNLSNHPHKNFLFENRKKLGTSGNPFISEAN 260 >gi|229070576|ref|ZP_04203815.1| Metallo-beta-lactamase [Bacillus cereus F65185] gi|228712553|gb|EEL64489.1| Metallo-beta-lactamase [Bacillus cereus F65185] Length = 285 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 12/77 (15%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P + ++++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPKTNDFVLVDAGMPKCANEI---------ISIAEDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPF 100 + +L + VPVYA Sbjct: 96 IIELIKYWGVPVYAHQM 112 >gi|291562489|emb|CBL41305.1| Zn-dependent hydrolases, including glyoxylases [butyrate-producing bacterium SS3/4] Length = 308 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 62/199 (31%), Gaps = 40/199 (20%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MKN+ +V + G+ L K ++ D G+++ D + +I Sbjct: 1 MKNDYIVCV----CGDASRAAYLI-----KGEKNVLFDAGMAYS------ADKMIKNIK- 44 Query: 61 IMKERKN-LMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEA----------- 107 + L A+ ++H+H DH + L + VY S +A +LE Sbjct: 45 -RELGDRPLDAVLLSHSHYDHISGVPFLRKEWPDLVVYGSAYAKKILEKPSAKKTMRELS 103 Query: 108 ----------KRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 K R + + D +D G I +++ ++ V Sbjct: 104 DAAAQGVGLTKAPDYRDEDLMVDKVVKEEDILDFGGHKITVFETPGHTKCSLSYMVDHDV 163 Query: 158 GNIVHTGDWKLDDDAILGD 176 T + + Sbjct: 164 IFASETVGVTTSEVYMPCY 182 >gi|260893634|ref|YP_003239731.1| beta-lactamase domain protein [Ammonifex degensii KC4] gi|260865775|gb|ACX52881.1| beta-lactamase domain protein [Ammonifex degensii KC4] Length = 274 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 22/95 (23%) Query: 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCG---VSFPKDDLPGVDLVFPDITFIMKERK 66 PLG GE G G I+ D G L G+DL Sbjct: 14 PLGLTGEHG-----LGLWVEYEGHKILFDAGQRGAVVSNAHLLGIDLRGA---------- 58 Query: 67 NLMAIFITHAHEDHYGALHDLWSFL--HVPVYASP 99 AI ++H H DH G L + ++ +PVYA P Sbjct: 59 --EAIVLSHGHYDHTGGLRAVLEYIGRRIPVYAHP 91 >gi|307578085|gb|ADN62054.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 326 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 31/136 (22%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 + I++D G + P + + P AI +TH H DH G + +L Sbjct: 21 DGRAIIVDPGQALPILEAHS-KGLIP------------TAILLTHHHADHIGGVPELLER 67 Query: 91 LHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 PVYA Y R+ GD +++ + + P Sbjct: 68 WPTLPVYAPHDT----RIALNYHRIG---------EGDSLNILGMRFQVIHT----PGHT 110 Query: 150 ALVIRSPVGNIVHTGD 165 + +++ GD Sbjct: 111 HSHLTFIGNDLLFCGD 126 >gi|325963802|ref|YP_004241708.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] gi|323469889|gb|ADX73574.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] Length = 265 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 66/213 (30%), Gaps = 40/213 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 + L +++D G G T + ++ AIF+TH H D Sbjct: 20 SCYLLTANDGERTWKVVMDLG-----SGALGA---IQRYTDLE----DIDAIFLTHLHPD 67 Query: 80 HYGAL----------HDLWSFLHVPVYASPFAIGLLE---AKRVYERVSKKIPCISFQAG 126 H L W +PV+ + + + ++ ++ Sbjct: 68 HCMDLCGLHVAIRWKPGGWGRGRIPVWGPAATADRMATAYGLPLDSGMHEEFDFTNWTER 127 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVI-----RSPVGNIVHTGDWKLDDDAILGDVTDKD 181 + V VG F++ VNH I E AL + I T + D TD Sbjct: 128 EPVTVGPFTVTPFGVNHPIEEAYALRVEVVEPDKDGNTIARTLTYSGD--------TDSC 179 Query: 182 SLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 + + +C++ A EG K + Sbjct: 180 AGLEEAAKDADLFLCEA--AFEEGRDDGIKDVH 210 >gi|311705709|gb|ADQ01120.1| artemis [Colobus guereza] Length = 689 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 106/341 (31%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWEKRIVSIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQIPLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAQGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + I++ + + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLSGILELVRSWITR 196 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + ++ G + + S + V V V + + Sbjct: 197 SPYH------VVWLNCKAAYGYEYLFTNLSEELGVQV--HVNKLDMFRNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E ++L G ++ I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K ++ P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPN 340 >gi|283779817|ref|YP_003370572.1| hypothetical protein Psta_2038 [Pirellula staleyi DSM 6068] gi|283438270|gb|ADB16712.1| conserved hypothetical protein [Pirellula staleyi DSM 6068] Length = 318 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 95/323 (29%), Gaps = 59/323 (18%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 FI+HAH DH A L + +P L + + V + +Q + Sbjct: 27 FISHAHSDHMAA-----HELAI---GTPLTAALYRRRYGDKLVRELPFEQPWQWDE---- 74 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 FS+ + H I + L + + ++++TGD++L + Sbjct: 75 --FSLSTHPAGH-IAGSAMLHVAASDQSLLYTGDFRLRESMTAETP---------RCPHA 122 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSV-SRIRSIIDIAEQI 250 L+ + T + + + DI+ V + V + + + I Sbjct: 123 DILVMECTFGQPHYKFPPRELASEQLIDIVSQTLRRQEVPVIHAYVTGKAQEVTAILAHA 182 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 G + + + A I + S +Y PRS A Sbjct: 183 GLPVKVHPLVAEVNAITAAHGIKIGNYGVATSLTEGFVYI------------APPRSQKA 230 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 M + K T+ + AI + V +S H Sbjct: 231 ------MPLLGPVAKRTIAVTGWAIDPTWRTRQR----------------YDYAVVLSDH 268 Query: 371 PYPNDLKRMYQWIRPQVLVAIHG 393 ++L + P+ + HG Sbjct: 269 ADYDELLECVDRVAPRQVYCTHG 291 >gi|262375096|ref|ZP_06068330.1| metallo-beta-lactamase superfamily protein [Acinetobacter lwoffii SH145] gi|262310109|gb|EEY91238.1| metallo-beta-lactamase superfamily protein [Acinetobacter lwoffii SH145] Length = 214 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 25/170 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ +++ I+ID G + + ++ + A+++TH H D Sbjct: 15 NCSIV--WDTETKEAILIDAG---GEPEKLKTEV--------EALGLTVKALWLTHGHLD 61 Query: 80 HYGALHDLWSFLHVPVYASP----FAIGLLEAKRVYERVSKKIPCISFQA---GDKVDVG 132 H GA+ L VPV F + +++ Q G+ + +G Sbjct: 62 HAGAVGALKKAWDVPVIGPHKEDAFWLDMIQEVSARYGFPIPEKVEVTQWLEGGEVLKLG 121 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS 182 E P + + +++ TGD TD Sbjct: 122 NEEFEVRFAPGHTPGHVMFY--NKNYDLLWTGDVLFKGS---IGRTDFPR 166 >gi|228915688|ref|ZP_04079274.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843974|gb|EEM89037.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 285 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE---RKNLMAIFITHAHEDHYGA 83 G+P S +I++D G+ +++ I+ AI +TH H DH G Sbjct: 45 GNPESNDFILVDTGMPKCANEI---------ISVAKDRFGTNSRPKAIILTHGHFDHVGG 95 Query: 84 LHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIP------CISFQAGDKVDVGAFSIE 137 + +L + VPVYA I L ++ Y + + +D+G SI+ Sbjct: 96 IIELIKYWDVPVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLFPNEPIDLGN-SIK 154 Query: 138 SVRVNHSIPETMAL-VIRSPVGNIVHTGDWK 167 + + ++P I +P H ++ Sbjct: 155 VLPTDGTVPHMPEFRWIHTPGHTPGHISLFR 185 >gi|256822585|ref|YP_003146548.1| beta-lactamase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796124|gb|ACV26780.1| beta-lactamase domain protein [Kangiella koreensis DSM 16069] Length = 462 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 94/276 (34%), Gaps = 42/276 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ G E+ + + I++DCG+ + P + + Sbjct: 1 MKIKVH--GAAEEVTGSC----IQITTEHSNIIVDCGLIQGAPKREERNRS-PFPFSLRE 53 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL-------------EAKR 109 + A+ +THAH DH G L L S P++ LL EA+ Sbjct: 54 ----IDAVILTHAHIDHSGRLPVLVSQGYQGPIHTHQANADLLDILLMDSAYLQEKEAEW 109 Query: 110 VYERVSKKIPCISFQAGDKVDVGAF--SIESVRVNHSI-PETMALVIRSPVGNIVHTG-- 164 ++ +K + + DV + N S+ +I G+I+ + Sbjct: 110 ANKKRDRKGLKLVDALYTQDDVPPVLSLLNLHPYNQSVEITEDITMILHNAGHILGSAHV 169 Query: 165 DWKLDDDAILGDVTDKDSLCAIGNE---------GILALMCDSTNAMREGTCISEKGIK- 214 + + +++ + + G+ ++ +ST R + ++ Sbjct: 170 ELLVKENSHTKRIILSGDIGNPGSPIQRDSNIFGKADLVLMESTYGNRNHQSWEQSVVEL 229 Query: 215 KNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI 250 K + ++ G VL+ +F+ V R + ++ + Sbjct: 230 KEALEKARHEGGNVLIPSFA--VGRTQVLLYYFAKY 263 >gi|222096588|ref|YP_002530645.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|221240646|gb|ACM13356.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] Length = 281 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 G P S +++ID G+ ++ + AI +TH H DH G + + Sbjct: 41 GHPKSNDFVLIDAGMPKCANE------IISVTETRFGTNSRPKAIILTHGHFDHVGGIIE 94 Query: 87 LWSFLHVPVYASPFAIGLL 105 L + VPVYA I L Sbjct: 95 LIKYWDVPVYAHQMEIPFL 113 >gi|308799055|ref|XP_003074308.1| polyadenylation cleavage/specificity factor 100 kDa subunit (ISS) [Ostreococcus tauri] gi|116000479|emb|CAL50159.1| polyadenylation cleavage/specificity factor 100 kDa subunit (ISS) [Ostreococcus tauri] Length = 807 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 34/225 (15%) Query: 4 EELVFLPLGGVGEI---GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 +++ PL GV + G Y I++DCG + D V+++ P Sbjct: 23 NKVLVTPLYGVRGVDFDGAGERAMCYHVSIDGCNILLDCGWT----DAFDVEMLKP---- 74 Query: 61 IMKERKNLMAIFITHAHED--HYGALHDLWSFL--HVPVYASPFAIGLLEAKRVYERVSK 116 + K++ A+ I+H D H GAL + L + VYA+ + + +++ Sbjct: 75 LEAIAKDVDAVLISHP--DTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTR 132 Query: 117 KIPCISFQAGDKVDVGAFSIESVRVNH---SIPETMALVIRSPVGNIVHTGD-------- 165 + + DV V V + S+ I HT Sbjct: 133 QDQEDFQETFSLDDVDKAFAAFVPVKYQQLSMLRGKGEGISVMAYAAGHTLGGAMWKIGK 192 Query: 166 ------WKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMRE 204 + +D + + + +I +L S Sbjct: 193 DAEDIIYAVDYNVRKERHLNGATFDSIHRPALLITDASSVEREVP 237 >gi|28199107|ref|NP_779421.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa Temecula1] gi|182681834|ref|YP_001829994.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa M23] gi|81438654|sp|Q87C74|GLO2_XYLFT RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|226724037|sp|B2I5S5|GLO2_XYLF2 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|28057205|gb|AAO29070.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa Temecula1] gi|182631944|gb|ACB92720.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa M23] Length = 258 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 31/136 (22%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 + I++D G + P + + P AI +TH H DH G + +L Sbjct: 21 DGRAIIVDPGQALPILEAHS-KGLIP------------TAILLTHHHADHIGGVPELLER 67 Query: 91 LHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 PVYA Y R+ GD +++ + + P Sbjct: 68 WPTLPVYAPHDT----RIALNYHRIG---------EGDSLNILGMRFQVIHT----PGHT 110 Query: 150 ALVIRSPVGNIVHTGD 165 + +++ GD Sbjct: 111 HSHLTFIGNDLLFCGD 126 >gi|311705707|gb|ADQ01119.1| artemis [Miopithecus talapoin] Length = 692 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 107/341 (31%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWEKRIISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQISLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAQGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + I++ + + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLSGILELVRSWITR 196 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + + ++ G + + S + V V V + + Sbjct: 197 SPYHA------VWLNCKAAYGYEYLFTNLSEELGVQV--HVNKLDMFRNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E ++L G ++ I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K ++ P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPN 340 >gi|239630677|ref|ZP_04673708.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526960|gb|EEQ65961.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 269 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 18/164 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + +++D G+S K + + I ++ ++ ++FITH H Sbjct: 18 GNATYIE----TPGHKVLVDAGLSGKKIETL--------MQSIGRDLTDVDSVFITHEHS 65 Query: 79 DHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L + VYA+ L + F G + +G +E Sbjct: 66 DHVRGVGVLARRYPKLSVYANAKTFAALP---KSVGKIPEDQLRLFDMGATLTLGDLDVE 122 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 S V+H D + D A D Sbjct: 123 SFGVSHDAAAPQFYQFHHDGKTFTILTDTGYVSDRVAGTIRDAD 166 >gi|218130095|ref|ZP_03458899.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] gi|217987599|gb|EEC53927.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] Length = 254 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 82/257 (31%), Gaps = 49/257 (19%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKW------------IMIDCGVSFPKDDL 48 +L L G GV EIG + P + I+IDC Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADPRDNRLRASSLLHADDATILIDC--------- 51 Query: 49 PGVDLVFPDITFIMKER---KNLMAIFITHAHEDHYGALHDLWSFLH---VPVYASPFAI 102 PD + + + + ITH H DH G L DL F +P+Y+ + Sbjct: 52 ------SPDFRAQILRTSIYEQIDGVLITHEHYDHTGGLDDLRPFCRFSEIPIYSDAYTA 105 Query: 103 GLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRVNHSIPETMALVIRSPVGNIV 161 L + Y V KK P + +V+ G F I V + + + I+ Sbjct: 106 AHLRVRMPYCFVDKKYPGVPRIYLQEVEAGKPFFIRQTEV-------LPVAVMHGRLPIL 158 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIM 221 LG VTD ++ E + L NA+R + + I + + Sbjct: 159 -----GYRIGGRLGYVTDMLTMPDASYEQLQGLDVLVMNALRPQPHPTHQSISEALAAAE 213 Query: 222 KNAKGCVLVTTFSSSVS 238 + S V Sbjct: 214 RIGAKETYFIHMSHHVG 230 >gi|257465086|ref|ZP_05629457.1| glyoxalase II family protein [Actinobacillus minor 202] gi|257450746|gb|EEV24789.1| glyoxalase II family protein [Actinobacillus minor 202] Length = 209 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 23/156 (14%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N ++ ++ +ID G D I F+ ++ N+ + ITHAH D Sbjct: 15 NCSVI---WDDNKNAAIIDAG-----------DNAERIIQFVEQQELNVEKLLITHAHLD 60 Query: 80 HYGALHDLWSFLHVPVYASPFA-------IGLLEAKRVYERVSKKIPCISFQAGDKVDVG 132 H A+ + VPVY S A + + K V +P GD+V VG Sbjct: 61 HIMAVESVRDHFGVPVYGSHLADKPLFEQLPQMCEKFGLPPVKGFLPDHWLTEGDEVTVG 120 Query: 133 AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 A + P + I +GD Sbjct: 121 ALKFNIRHLPGHAPGHIG--FFDFENKIAFSGDVLF 154 >gi|220904995|ref|YP_002480307.1| beta-lactamase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869294|gb|ACL49629.1| beta-lactamase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 208 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 53/164 (32%), Gaps = 24/164 (14%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + PLG + Y ++ + + +D G P + ++ + Sbjct: 3 VAVFPLGPLQTN-------SYIIHNATRAVAVDVG---GDPA--------PMLEYLKSHQ 44 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLE---AKRVYERVSKKIPCI- 121 L A+ ITH H DH + +L + PVY L + K Sbjct: 45 LTLDAVCITHRHFDHMYGVAELAAATGAPVYMPQGDDSLADTESGKGGIWGFPPVPDFKS 104 Query: 122 SFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 S K +G E + P ++L P +V TGD Sbjct: 105 SPMPLGKTSIGGMDCEVLETPGHTPGGVSLYF--PEEQVVFTGD 146 >gi|110833792|ref|YP_692651.1| hypothetical protein ABO_0931 [Alcanivorax borkumensis SK2] gi|110646903|emb|CAL16379.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 478 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 38/239 (15%) Query: 35 IMIDCGVSFPKDDLP---GVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF- 90 ++IDCG+ D P D + D + A+ +TH H DH G L L Sbjct: 39 VLIDCGLFQGGDVGPAGASADDLAIDFD-----ISRIQAVVLTHVHIDHVGRLPWLLGAG 93 Query: 91 LHVPVYASPFAIGLLEAKRVYE---RVSKKIPCISFQAGD------KVDVGAF------- 134 P+ S + LL VS+K + V G + Sbjct: 94 YVGPICCSGPSAKLLPIVLEDAFRLGVSRKPADVERFMARLEAALVPVPFGYWHALEMAD 153 Query: 135 ----SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 I R H + + V +GD D I Sbjct: 154 GTVAEIRLGRAGHILGSAHVSCRLAGEHITVFSGDLGAADAPI------LPEPEPPPAAN 207 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 +L + +++ EG ++ ++ + +++ KG +L+ FS + R + ++ E Sbjct: 208 VLVIESTYGDSLHEGRKTRQQRLEDALVKALRD-KGTLLIPAFS--IGRTQELLYELEA 263 >gi|255023536|ref|ZP_05295522.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes FSL J1-208] Length = 243 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D +++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAAGKVFVYTADSAYQDSFIPF 164 >gi|154490156|ref|ZP_02030417.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] gi|154089048|gb|EDN88092.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] Length = 261 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 43/221 (19%) Query: 28 SPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALH 85 + K I++DCG PD + I + L A+ I+H H DH G L Sbjct: 40 VETDGKRILLDCG---------------PDFRWQVIRNKTYRLDAVLISHEHYDHVGGLD 84 Query: 86 DLWSFLH---VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF-----SIE 137 DL F V VYA +E + Y + K P + ++ F S+ Sbjct: 85 DLRPFCREKGVDVYAEDNVAEAIETRIPYVFRAHKYPGVPNLELHRIGNEPFVVAGISVT 144 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 +RV H + +GN+ + D K ++ + EG+ L+ Sbjct: 145 PIRVMH----GKLPIFGYRIGNMAYLTDVKYLP---------EEEYAKL--EGLDVLILT 189 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVS 238 A+R G + + +++ + +I + + S + Sbjct: 190 ---ALRRGAHPTHESLEEALVNIERIKPKETYLIHMSHRIG 227 >gi|57237654|ref|YP_178902.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|57166458|gb|AAW35237.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|315058263|gb|ADT72592.1| hypothetical protein CJS3_0857 [Campylobacter jejuni subsp. jejuni S3] Length = 198 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 3/131 (2%) Query: 38 DCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 +C + F + +D F + FI K KN +AI TH H DH + +P+Y Sbjct: 14 NCYILFGEHGEIIIDPGFDALNFIKKHVKNPLAILNTHGHYDHVWDNEKVKQAYQIPIYI 73 Query: 98 SPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 +LE + + + +G + + P I Sbjct: 74 HKNDTFMLEDPF-NQGFMPSKANYLIDDENIISIGGLDFKFHFLPGHTPGCTM--IEIVG 130 Query: 158 GNIVHTGDWKL 168 NI+ +GD+ Sbjct: 131 KNIMFSGDFLF 141 >gi|224824447|ref|ZP_03697554.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] gi|224602940|gb|EEG09116.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] Length = 255 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 35/177 (19%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + LG IG + +IDCG + + + Sbjct: 1 MRVSILGASSGIGRPARTTSFLLDDHT---LIDCGTGVGSLE--------------VAQL 43 Query: 66 KNLMAIFITHAHEDHYGALHDLWSFL------HVPVYASPFAIGLLEAKRVYERVSKKIP 119 + + ++H+H DH G L L + VY+ + ++ + Sbjct: 44 LRITRVLLSHSHLDHCGFLPLLADVHAGHAGPGITVYSQQATLDAVKQHLFNGVIWPDYT 103 Query: 120 CISFQAGDKVDVGAFSI-----------ESVRVNHSIPETMALVIRSPVGNIVHTGD 165 V + A + ++ HSIP + ++ + +GD Sbjct: 104 DTPSPENPYVRLQAIEVGDPVALPGAIATALPAEHSIP-AVGWLVEGDWRALAFSGD 159 >gi|301789021|ref|XP_002929927.1| PREDICTED: protein artemis-like [Ailuropoda melanoleuca] gi|281339274|gb|EFB14858.1| hypothetical protein PANDA_020236 [Ailuropoda melanoleuca] Length = 692 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 106/341 (31%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELLLTSPKYRFWEKRIISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQIPLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T + I + + + I++ + + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSRE--ECLSGIVELVRSWITR 196 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + ++ G + + S + V + V + + Sbjct: 197 SPYH------VVWLNCKAAYGYEYLFTNLSEEFGVQI--HVDKLDMFRNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E +L G + ++ I S G ++ Sbjct: 249 RSTQIHACRHPKAEEYFHWNKLPCGIISKNRIPLHTISIKPSTMWFGERTRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K I P + Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSHISPVNVYPN 340 >gi|260494442|ref|ZP_05814572.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_33] gi|260197604|gb|EEW95121.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_33] Length = 260 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 21/181 (11%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ L G G N +++D G S K + + I K Sbjct: 1 MKISILGSGSAG----NSTFVEI----EDYKLLVDTGFSCKKTEE--------KLEKIGK 44 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + ++ AI ITH H DH + ++P+Y +P + + K I+F Sbjct: 45 KLSDISAILITHEHSDHINGAGVIARKYNIPIYITPESYKVGAIKLGE----IDKSLINF 100 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGDWKLDDDAILGDVTDKDS 182 GD + + V H T+ + + I + D + + D D+ Sbjct: 101 IDGDFILNDKVKVSPFDVMHDAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDA 160 Query: 183 L 183 + Sbjct: 161 M 161 >gi|148263954|ref|YP_001230660.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146397454|gb|ABQ26087.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 252 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 21/136 (15%) Query: 62 MKERKNLMAIFITHAHEDHYGALHDLWSFL-------HVPVYASPFAIGLLEAKRVYERV 114 +E+ + IF+THAH DH + L + +V + + + + + + Sbjct: 40 EEEQWAIKYIFVTHAHLDHIRDIPLLADNIVIKKLCNNVKIAGIKEVLEAISSHLLNNVI 99 Query: 115 SKKIPCIS-----------FQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHT 163 I + ++ + +SI ++RV+HS+P + ++R +I++T Sbjct: 100 WPDFSKIPTTESPIITYWQIEPEKEIQIDGYSITAIRVDHSVP-AVGYLVRRNGKSILYT 158 Query: 164 GDWKLDDDAILGDVTD 179 GD + + D Sbjct: 159 GDTG--PTDRIWEWAD 172 >gi|39933875|ref|NP_946151.1| beta-lactamase-like protein [Rhodopseudomonas palustris CGA009] gi|192289294|ref|YP_001989899.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|39647722|emb|CAE26242.1| Beta-lactamase-like [Rhodopseudomonas palustris CGA009] gi|192283043|gb|ACE99423.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 244 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 57/198 (28%), Gaps = 37/198 (18%) Query: 4 EELVFLPLG---GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDIT 59 ++ F+ G G G G + S +IDCG S P G+ Sbjct: 1 MQVRFVGCGDAIGSG--GRLNTCFHVSGQSVN--FLIDCGATSLPALRRYGI-------- 48 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHD------LWSFLHVPVYASPFAIGLLEAKRVYER 113 R++L I ITH H DH+G L V A P I + + + Sbjct: 49 ----LREDLDLILITHFHADHFGGLPFMMLDAQFMKRKRPLVIAGPLGIDIRLTRLMEAM 104 Query: 114 VSKKIPCISF--------QAGDKVDVGAFSIESVRVNHSIPETMALV--IRSPVGNIVHT 163 + GA ++ V H I + + ++ Sbjct: 105 FEYSSATKPNFDLQVLALEPAVTRQFGAVTVTPFPVVHGDSGGPFFAYRIEAEGRILAYS 164 Query: 164 GDWKL-DDDAILGDVTDK 180 GD + D D Sbjct: 165 GDTQWTDQLVAAAHDADL 182 >gi|282853879|ref|ZP_06263216.1| metallo-beta-lactamase domain protein [Propionibacterium acnes J139] gi|282583332|gb|EFB88712.1| metallo-beta-lactamase domain protein [Propionibacterium acnes J139] Length = 230 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 30/184 (16%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N L + +++D G+ ++ G + R +AI +TH H D Sbjct: 21 NCYLL--AREQGSECVIVDPGM--GAEEFLG--------DALRTHRLVPVAIAVTHGHID 68 Query: 80 HYGALHDLWSFLHVPVYASP---------------FAIGLLEAKRVYERVSKKIPCISFQ 124 H G+ + +PV FA L+E + + + + Sbjct: 69 HIGSARQVGDEYGIPVLCPRDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEEVVDVE 128 Query: 125 AGDKVDVGAFSIESVRVNHSIPETMALV-IRSPVGNIVHTGDWKLDDD--AILGDVTDKD 181 +E + P + I + G IV +GD +D Sbjct: 129 PFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVMSGDVVFAGSIGRTDMPGSDPA 188 Query: 182 SLCA 185 + Sbjct: 189 QMSH 192 >gi|71894931|ref|NP_001026379.1| cleavage and polyadenylation specificity factor subunit 2 [Gallus gallus] gi|60098929|emb|CAH65295.1| hypothetical protein RCJMB04_15m16 [Gallus gallus] Length = 782 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 60/358 (16%) Query: 6 LVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKER 65 + L GV E + Y ++DCG D+ +D++ + K Sbjct: 5 IKLTTLSGVQE----ESALCYLLQVDEFRFLLDCGW----DENFSMDII----DSLKKHV 52 Query: 66 KNLMAIFITHAHED--HYGALHDLWSF--LHVPVYAS--------PFAIGLLEAKRVYER 113 + A+ ++H D H GAL L+ +YA+ F L +++ E Sbjct: 53 HQVDAVLLSHP--DPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTED 110 Query: 114 VSKKIPCISFQAGDKVDVGAF-------------SIESVRVNHSIPETMALVIRSPVGNI 160 + A DK+ F SI + H I T+ +++ I Sbjct: 111 FTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEI 170 Query: 161 VHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDI 220 V+ D+ I + + L + ++T E+ + + + Sbjct: 171 VYAVDFN-HKREIHLNGCSLEMLSRPSLLITDSF--NATYVQPRRKQRDEQLLTNVLETL 227 Query: 221 MKNAKGCVLVTTFSS--SVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQ 278 + + V T ++++ I + G + + ++ Sbjct: 228 RGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVY--------------SLALLNNVS 273 Query: 279 LFLSDESFGLYPR--EQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRA 334 + + S ++L+ + P + ++ V+ +S+ Sbjct: 274 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPCPKVVLASQP 331 >gi|74147659|dbj|BAE38706.1| unnamed protein product [Mus musculus] Length = 573 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 105/342 (30%), Gaps = 47/342 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y +I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKYRFWENRIITIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQISLVDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKG-IKKNIYDIMKNAKGCVL 229 + + + G I ++ D+T I + + I +++++ Sbjct: 145 ------SRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSW----- 193 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 VT V ++ G + + S + V V V + + Sbjct: 194 VTRSPHHVV----WLNCKAAYGYEYLFTNLSEELGVQV--HVDKLDMFKNMPDILHHLTT 247 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 R I + E +L G K A I S G ++ Sbjct: 248 DRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI--- 304 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P + Sbjct: 305 ------VRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPN 340 >gi|158966680|ref|NP_666226.2| protein artemis isoform 1 [Mus musculus] gi|71153326|sp|Q8K4J0|DCR1C_MOUSE RecName: Full=Protein artemis; Short=mArt; AltName: Full=DNA cross-link repair 1C protein; AltName: Full=SNM1-like protein gi|123228224|emb|CAM16038.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Mus musculus] Length = 705 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 105/342 (30%), Gaps = 47/342 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y +I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKYRFWENRIITIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQISLVDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKG-IKKNIYDIMKNAKGCVL 229 + + + G I ++ D+T I + + I +++++ Sbjct: 145 ------SRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSW----- 193 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 VT V ++ G + + S + V V V + + Sbjct: 194 VTRSPHHVV----WLNCKAAYGYEYLFTNLSEELGVQV--HVDKLDMFKNMPDILHHLTT 247 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 R I + E +L G K A I S G ++ Sbjct: 248 DRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI--- 304 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P + Sbjct: 305 ------VRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPN 340 >gi|28316788|ref|NP_783614.1| protein artemis isoform 2 [Mus musculus] gi|26331966|dbj|BAC29713.1| unnamed protein product [Mus musculus] gi|26342607|dbj|BAC34960.1| unnamed protein product [Mus musculus] gi|123228225|emb|CAM16039.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Mus musculus] Length = 603 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 105/342 (30%), Gaps = 47/342 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y +I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKYRFWENRIITIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L Sbjct: 87 IETPTQISLVDEASGEKEEVVVTLLPAGH-CPGSVMFLFQGSNGTVLYTGDFRLAKGEA- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKG-IKKNIYDIMKNAKGCVL 229 + + + G I ++ D+T I + + I +++++ Sbjct: 145 ------SRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSW----- 193 Query: 230 VTTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLY 289 VT V ++ G + + S + V V V + + Sbjct: 194 VTRSPHHVV----WLNCKAAYGYEYLFTNLSEELGVQV--HVDKLDMFKNMPDILHHLTT 247 Query: 290 PREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRL 349 R I + E +L G K A I S G ++ Sbjct: 248 DRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI--- 304 Query: 350 VEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K +I P + Sbjct: 305 ------VRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPN 340 >gi|168185972|ref|ZP_02620607.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] gi|169295894|gb|EDS78027.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] Length = 240 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 27/178 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L L G G N L + ++++CG+ + + + F Sbjct: 1 MKLKVLGSGSSG----NCYLL----QGKEETLILECGLPY--------KTILKGLNF--- 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + N++ +TH H+DH A +DL + VY S +E + +++ Sbjct: 42 KIGNVVGCLVTHEHKDHSKAANDLIRN-GIDVYLSQGTAAGIE----FIDINRSHRIHEI 96 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKD 181 ++ +G F I + H E + +I+ + + + D +D D Sbjct: 97 KSEKVFKIGEFIILPFKTEHDAAEPLGFLIQHLEMDQLL---FITDSYYCRYKFSDID 151 >gi|269837101|ref|YP_003319329.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786364|gb|ACZ38507.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 267 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 62/193 (32%), Gaps = 43/193 (22%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYG-A 83 GY +++DCG PG+ V D+T + + L AI I+H H DH Sbjct: 21 GYLVMHEGTRVVLDCG--------PGILPVLRDLT----DMRTLDAIIISHLHADHTLDL 68 Query: 84 LH--DLWS------FLHVPVYASPFAIGLLEAK---RVYER------VSKKIPCISFQAG 126 + +PV+ P + L+ + + Sbjct: 69 VPLRYGLKYGPGATDRRLPVFLPPGGLAFLDRIAGALATDGEPAGDFFESVFALTEYDPA 128 Query: 127 DKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAI 186 + VG +I H+IP A+ I ++V+ D D Sbjct: 129 STLTVGTLTIRFHPTRHAIP-CWAMRIEDGEHSLVYLADTAP--------TPDVARFAH- 178 Query: 187 GNEGILALMCDST 199 G ++C++T Sbjct: 179 ---GADLVICEAT 188 >gi|257076149|ref|ZP_05570510.1| metallo-beta-lactamase superfamily hydrolase [Ferroplasma acidarmanus fer1] Length = 249 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 31/169 (18%) Query: 30 SSRKWIMIDCGV---SFPKD-DLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALH 85 I+IDCG+ F + +D + +IFI+H H DH Sbjct: 20 DEYDAIIIDCGISMKKFSEKTSQFQIDGLE-------------KSIFISHEHSDHSAGAK 66 Query: 86 DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSI 145 + L +Y+ + K E S+ +V +G F++ V VNH Sbjct: 67 AISRKLKADLYSRSGTLE----KLHLE--------NSYSINGEVAIGNFTVTPVHVNHDA 114 Query: 146 PETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTDKDSLCAIGNEGIL 192 + + VIR+ I D D+ ++ ++ A + +L Sbjct: 115 VDPVVYVIRNRGVKISVVSDLGIMNDELLDEMKNSNIMAIEANHDPEML 163 >gi|225026136|ref|ZP_03715328.1| hypothetical protein EUBHAL_00377 [Eubacterium hallii DSM 3353] gi|224956541|gb|EEG37750.1| hypothetical protein EUBHAL_00377 [Eubacterium hallii DSM 3353] Length = 215 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 26/162 (16%) Query: 14 VGEIGMNMALYGYGSPSSRKWIMID-CGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIF 72 +G I N + ++ I+ID G P++ I F+ E +L + Sbjct: 11 LGPIDTNTYIL--MDDEIKEAIIIDPAGS--PEEL----------IKFLEDEGYSLDGVL 56 Query: 73 ITHAHEDHYGALHDLWSFLHV---PVYASPFAIGLLEAK------RVYERVSKKIPCISF 123 +TH H DH GAL L VYA+ +L K E + + Sbjct: 57 LTHGHHDHIGALEGLREHYDPWKLRVYAAKPEQEVLMVKDYNLSTMFGEGYTTHANMMID 116 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD 165 + + + + +GD Sbjct: 117 DKQIFEVTSKHKCQCLYTPGHTLGSCCYYFAEEG--WLFSGD 156 >gi|89094530|ref|ZP_01167469.1| Metallo-beta-lactamase superfamily protein [Oceanospirillum sp. MED92] gi|89081266|gb|EAR60499.1| Metallo-beta-lactamase superfamily protein [Oceanospirillum sp. MED92] Length = 257 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%) Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP 99 P + ++ + L AI ITH H DH G + L PVY Sbjct: 36 PVLAYLEENNLQLTAILITHHHNDHTGGVEALKDRFKTPVYGPA 79 >gi|205356778|ref|ZP_03223537.1| putative hydrolase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345345|gb|EDZ31989.1| putative hydrolase [Campylobacter jejuni subsp. jejuni CG8421] Length = 198 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 3/131 (2%) Query: 38 DCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 +C + F + +D F + FI K KN +AI TH H DH + +P+Y Sbjct: 14 NCYILFGEHGEIIIDPGFDALNFIKKHVKNPLAILNTHGHYDHVWDNEKVKQAYQIPIYI 73 Query: 98 SPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV 157 +LE + + + +G + + P I Sbjct: 74 HKNDTFMLEDPF-NQGFMPSKADYLIDDENIISIGGLDFKFHFLPGHTPGCTM--IEIVG 130 Query: 158 GNIVHTGDWKL 168 NI+ +GD+ Sbjct: 131 KNIMFSGDFLF 141 >gi|16804206|ref|NP_465691.1| hypothetical protein lmo2167 [Listeria monocytogenes EGD-e] gi|224500168|ref|ZP_03668517.1| hypothetical protein LmonF1_10994 [Listeria monocytogenes Finland 1988] gi|224501034|ref|ZP_03669341.1| hypothetical protein LmonFR_00695 [Listeria monocytogenes FSL R2-561] gi|254826944|ref|ZP_05231631.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254831396|ref|ZP_05236051.1| hypothetical protein Lmon1_08557 [Listeria monocytogenes 10403S] gi|255025087|ref|ZP_05297073.1| hypothetical protein LmonocytFSL_00080 [Listeria monocytogenes FSL J2-003] gi|255029898|ref|ZP_05301849.1| hypothetical protein LmonL_14029 [Listeria monocytogenes LO28] gi|284802614|ref|YP_003414479.1| hypothetical protein LM5578_2370 [Listeria monocytogenes 08-5578] gi|284995756|ref|YP_003417524.1| hypothetical protein LM5923_2321 [Listeria monocytogenes 08-5923] gi|16411637|emb|CAD00245.1| lmo2167 [Listeria monocytogenes EGD-e] gi|258599324|gb|EEW12649.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|284058176|gb|ADB69117.1| hypothetical protein LM5578_2370 [Listeria monocytogenes 08-5578] gi|284061223|gb|ADB72162.1| hypothetical protein LM5923_2321 [Listeria monocytogenes 08-5923] Length = 205 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +++D P D+ ++ + +A+ +TH H D Sbjct: 15 NCYII----YQDNVALIVD-----PGDEASKIEAEIAKLEV------KPVAVLLTHCHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H GAL ++ ++PVY SP Sbjct: 60 HIGALEEIRKTYNIPVYVSPL 80 >gi|332027906|gb|EGI67961.1| Protein artemis [Acromyrmex echinatior] Length = 348 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 106/357 (29%), Gaps = 58/357 (16%) Query: 72 FITHAHEDHYGALH----DLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 F++H H DH L+ D + +Y S LE K + + + Sbjct: 30 FLSHCHIDHMCGLNNMFFDHLKQYNKYLYCSHITKVFLENKYYENLRNVETYVKDIEVDK 89 Query: 128 KVDVGA-----------FSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG- 175 KV + + H P ++ V I++TGD++++ Sbjct: 90 KVCIEYRSNYNSEETDILFVTFTSAGH-CPGSVMFVFEKMNKLILYTGDFRINPKDYRKI 148 Query: 176 ---DVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 + D N + A S + K + + + + V++ Sbjct: 149 KSLNCNDFPK--KFDNIYLDTTFLGHDFAYLPTRIESINVMCKVVKEWLDESPRKVVI-- 204 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPRE 292 ++ + G + + + S + + ++ + + + + + Sbjct: 205 -----------LECSALYGSEFLYMKLS-ESLKTLIHVKECVYNSYIRIPELACH----- 247 Query: 293 QLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQ 352 P A + + + T++ S + G++ ++ ++ E+ Sbjct: 248 --------VTNNPLDARIHACMSKYVCMNRQDILTIVPSVKKWKGHDTSVVGEWDKFREK 299 Query: 353 GVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEG 409 V S H ++LK+ Q+ +P+ + L + Sbjct: 300 TFNVCY---------STHASFDELKKFIQYFKPKKIHPCVCPENEQDTINRLLDEIR 347 >gi|217964970|ref|YP_002350648.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes HCC23] gi|224499469|ref|ZP_03667818.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes Finland 1988] gi|224503102|ref|ZP_03671409.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes FSL R2-561] gi|217334240|gb|ACK40034.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes HCC23] Length = 243 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D +++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAAGKVFVYTADSAYQDSFIPF 164 >gi|229156684|ref|ZP_04284772.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] gi|228626853|gb|EEK83592.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] Length = 281 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 G P + +++ID G+ ++ + AI +TH H DH G + + Sbjct: 41 GHPHTNDFVLIDAGMPKCANE------IISVTETRFGTNSRPKAIILTHGHFDHVGGIIE 94 Query: 87 LWSFLHVPVYASPFAIGLL 105 L + VPVYA I L Sbjct: 95 LIKYWDVPVYAHQMEIPFL 113 >gi|16802970|ref|NP_464455.1| hypothetical protein lmo0930 [Listeria monocytogenes EGD-e] gi|16410332|emb|CAC99008.1| lmo0930 [Listeria monocytogenes EGD-e] Length = 243 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D +++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKVIEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAAGKVFVYTADSAYQDSFIPF 164 >gi|254447028|ref|ZP_05060495.1| cAMP phosphodiesterase class-II:Metallo-beta-lactamase superfamily [gamma proteobacterium HTCC5015] gi|198263167|gb|EDY87445.1| cAMP phosphodiesterase class-II:Metallo-beta-lactamase superfamily [gamma proteobacterium HTCC5015] Length = 254 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 37/185 (20%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 +L LG G I + S + ++ID G ++ + Sbjct: 1 MKLRV--LGCSGGI---ASELDTTSYLLDEDVLIDAGT---GLTTLSIEEI--------- 43 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFL------HVPVYASPFAIGLLEAKRVYERVSKK 117 K + IF+TH+H DH + L + V+A P I L+ + Sbjct: 44 --KRIRHIFLTHSHLDHIAGFPLMVDTLFGHQVEPLQVHAHPETIEALKEHIFNWVIWPN 101 Query: 118 -----------IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDW 166 + G++V VGA +E + VNH++ +A + + +GD Sbjct: 102 FEELEFQGVSAFEWCPMEHGERVQVGARELEMIPVNHTV-HGVAYRVVQGEKSFCFSGDT 160 Query: 167 KLDDD 171 +D Sbjct: 161 TTNDS 165 >gi|90407278|ref|ZP_01215464.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] gi|90311561|gb|EAS39660.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] Length = 258 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 14/77 (18%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 ++ S++ I++D P D P +++ + ++ ++ AI +THAH+DH Sbjct: 14 YIWLIKDSQSQRCILVD-----PGDAQPVLEI-------LEQQNLSVDAILVTHAHQDHI 61 Query: 82 GALHDLWSFLH--VPVY 96 G + +L + + +P+Y Sbjct: 62 GGISELLAHFNKEIPIY 78 >gi|86751719|ref|YP_488215.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gi|86574747|gb|ABD09304.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 244 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 32/186 (17%) Query: 4 EELVFLPLG-GVGEIGMNMALYGYGSPSSRKWIMIDCG-VSFPKDDLPGVDLVFPDITFI 61 +L F+ G +G G + +IDCG S P G+ Sbjct: 1 MQLRFVGCGDALGSGGRLNTCFHVAGERVN--FLIDCGATSLPALKRYGI---------- 48 Query: 62 MKERKNLMAIFITHAHEDHYGALHDLW------SFLHVPVYASPFAIGL----LEAKRVY 111 R L + ITH H DH+G L L V A P I + + Sbjct: 49 --SRDALDLVLITHFHGDHFGGLPFLLLDAKSAKRKRPLVIAGPPGIDIRLTRVMEALFE 106 Query: 112 E----RVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALV--IRSPVGNIVHTGD 165 + + + I+ GA + V H I + + ++GD Sbjct: 107 HSSATQPTFDLQVIALDPTVPRTFGAVTATPFPVIHGDSGGPFYAYRIEAEGRTLAYSGD 166 Query: 166 WKLDDD 171 + D Sbjct: 167 TQWTDT 172 >gi|16800001|ref|NP_470269.1| hypothetical protein lin0930 [Listeria innocua Clip11262] gi|16413378|emb|CAC96162.1| lin0930 [Listeria innocua Clip11262] gi|313619713|gb|EFR91330.1| metal-dependent beta-lactamase superfamily III protein [Listeria innocua FSL S4-378] Length = 243 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNFID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ + ++A D +++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAVEYKADDTLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTVHPVP-CYAMRIEAAGKIFVYTADSAYQDSFIPF 164 >gi|85708670|ref|ZP_01039736.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] gi|85690204|gb|EAQ30207.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] Length = 260 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 24/209 (11%) Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLW-----SFLHVPVYASPFAIGLLEAKRVYERVS 115 + + A+F TH H DH + DL +P YAS + L + Y Sbjct: 66 LANRIDKIDAVFWTHDHADHCHGIDDLRVLRYGRGGPIPAYASTETVRRLRQRFGYVFAG 125 Query: 116 KKIPCISFQAGDKVDVG---AFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDA 172 + + F +E ++ H ET + +I + D+ Sbjct: 126 QDGYPTICSLETLERLKIVAGFGVEWCQMEHGPGETTGYRFEADGKSIAYATDFSSISTE 185 Query: 173 ILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTT 232 ++ +G+ L+ D R + + I ++ G ++++ Sbjct: 186 MVELY-----------DGVDILVSDCL---RREPHPTHAHLAMAIELAERSGAGQLVLSH 231 Query: 233 FSSSVSRIRSIIDIAEQIGRKIVLLGSSL 261 S+ R+++D + G + G + Sbjct: 232 LDKSMD-YRTLVDEVPE-GVVVGFDGLEM 258 >gi|47096217|ref|ZP_00233815.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|254898897|ref|ZP_05258821.1| hypothetical protein LmonJ_03750 [Listeria monocytogenes J0161] gi|254911615|ref|ZP_05261627.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935941|ref|ZP_05267638.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015362|gb|EAL06297.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|258608529|gb|EEW21137.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589562|gb|EFF97896.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 243 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 27/161 (16%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDH---Y 81 Y + ++ID G S +D ++ A I+H H DH Sbjct: 21 SYLLEEAGFKLLIDVGASAVSIMQNYID------------PDDIDAAIISHYHPDHVADV 68 Query: 82 GALHD--LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAF 134 G L L S +P+Y E Y ++ I ++A D++++G F Sbjct: 69 GILQHIRLLSQKKEKPPVLPIYGHKED----ERGYSYLEMANVTKAIEYKADDRLEIGPF 124 Query: 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 + ++ H +P A+ I + V+T D D I Sbjct: 125 KVTFLKTIHPVP-CYAMRIEAGDKVFVYTADSAYQDSFIPF 164 >gi|71898477|ref|ZP_00680649.1| Hydroxyacylglutathione hydrolase [Xylella fastidiosa Ann-1] gi|71731790|gb|EAO33849.1| Hydroxyacylglutathione hydrolase [Xylella fastidiosa Ann-1] Length = 275 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 31/136 (22%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 + I++D G + P + + P AI +TH H DH G + +L Sbjct: 38 DGRAIIVDPGQALPILEAHS-KGLIP------------TAILLTHHHADHIGGVPELLER 84 Query: 91 LHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 PVYA Y R+ GD +++ + + P Sbjct: 85 WPTLPVYAPHDT----RIALNYHRIG---------EGDSLNILGMRFQVIHT----PGHT 127 Query: 150 ALVIRSPVGNIVHTGD 165 + +++ GD Sbjct: 128 HSHLTFIGNDLLFCGD 143 >gi|311067249|ref|YP_003972172.1| putative metal-dependent hydrolase [Bacillus atrophaeus 1942] gi|310867766|gb|ADP31241.1| putative metal-dependent hydrolase [Bacillus atrophaeus 1942] Length = 265 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 74/253 (29%), Gaps = 41/253 (16%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNL------MAIFI 73 N+ ++++ID G +P + I + ++ AI + Sbjct: 32 NVYFVQ-NPSQPHEFVLIDAG-------MPKSAGMI-----IKEAKQRFGDNCTCKAIIL 78 Query: 74 THAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGA 133 TH H DH GA+ ++ VPVY + + + Sbjct: 79 THGHFDHIGAIEEILEQWKVPVY------------VHEKELPYVTGQEDYPPARPDSKSG 126 Query: 134 FSIESVRVN--HSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + + HSI + + G++ +W+ G Sbjct: 127 LVAKLSPLFPRHSINISSHVHTLPEDGSVPFLEEWEWLFTP-GHTPGHVSLFRESGR--- 182 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSS-VSRIRSIIDIAEQI 250 + + +A+ S + ++ + T +S + RI + A Sbjct: 183 ---VLLAGDAVITVEQESLADVVIQKQELHGPPAYFTMDTALTSESIQRIAKLEPEALLT 239 Query: 251 GRKIVLLGSSLKR 263 G I + G + + Sbjct: 240 GHGIPMTGRNYSK 252 >gi|288802875|ref|ZP_06408312.1| lipoate-protein ligase B [Prevotella melaninogenica D18] gi|288334692|gb|EFC73130.1| lipoate-protein ligase B [Prevotella melaninogenica D18] Length = 276 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 44/241 (18%) Query: 29 PSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF--IMKERKNLMAIFITHAHEDHYGALHD 86 +++ I+ID G PD + + + + + ITH H DH G + D Sbjct: 64 ETAKTRIVIDSG---------------PDFRQQMLPQPFRKIDGLLITHIHYDHVGGIDD 108 Query: 87 LWSFL---HVPVYASPFAIGLLEAKRVY------ERVSKKIPCISFQAGDKVDVGAFSIE 137 + + ++ VYA+ L Y K+ S Q K +G + Sbjct: 109 VRPYCALGNIEVYANENTCDGLRHNFPYCFTDNPYPGVPKLNLHSIQPHVKFMIGDIEVM 168 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCD 197 + V H ++ G + + D K D L + EG+ L+ + Sbjct: 169 PISVMH----GGLPILGYRFGKLAYITDMKTIKDEELPYL-----------EGVETLVVN 213 Query: 198 STNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQIGRKIVLL 257 + RE S + I + I K +T + + + Sbjct: 214 ALRWEREHH--SHQLISEAIDFSRKIGAKRTYLTHLTHKIG-LHEEAQKLLPNDIFFAYD 270 Query: 258 G 258 G Sbjct: 271 G 271 >gi|291300479|ref|YP_003511757.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290569699|gb|ADD42664.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 318 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 59 TFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 I + I +TH H DH + + V + + LL A E ++ Sbjct: 96 DVIDEHLPKADTILVTHGHWDHIADVPYIAKKTGATVIGTETHLNLLRAMDAPEEQLGQV 155 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 G+ ++E + HS Sbjct: 156 VG-----GEFYQFKGCTVEVFKSTHSAKGDH 181 >gi|134095499|ref|YP_001100574.1| hydroxyacylglutathione hydrolase [Herminiimonas arsenicoxydans] gi|226724000|sp|A4G7G5|GLO2_HERAR RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|133739402|emb|CAL62452.1| putative hydroxyacylglutathione hydrolase (Glyoxalase II) (Glx II) GloB-like [Herminiimonas arsenicoxydans] Length = 259 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 56 PDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASP 99 P + + + + +L+AI +TH H DH G + L +VPV+A Sbjct: 34 PILAALEEHQLSLVAILLTHHHADHVGGVAKLLQHFNVPVFAPR 77 >gi|206974663|ref|ZP_03235579.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|206747306|gb|EDZ58697.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] Length = 285 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 G P + +++ID G+ ++ + AI +TH H DH G + + Sbjct: 45 GHPHTNDFVLIDAGMPKCANE------IISVTETRFGTNSRPKAIILTHGHFDHVGGIIE 98 Query: 87 LWSFLHVPVYASPFAIGLL 105 L + VPVYA I L Sbjct: 99 LIKYWDVPVYAHQMEIPFL 117 >gi|116672264|ref|YP_833197.1| beta-lactamase domain-containing protein [Arthrobacter sp. FB24] gi|116612373|gb|ABK05097.1| beta-lactamase domain protein [Arthrobacter sp. FB24] Length = 206 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 12 GGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAI 71 GG ++ N+ + G ++ + ++ID P D + V + ++AI Sbjct: 18 GGTWDVDNNVWIVG----NNDECVIIDS----PHDAEAIISQV---------RGRKVLAI 60 Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 +THAH DH GA + + P+Y P + L + P GD V Sbjct: 61 LLTHAHNDHIGAARAVAEAVGAPIYLHPDDLVL-----WDQVYPDIKPDRYLADGDVFRV 115 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLD 169 G ++ ++ P + + V +GD + Sbjct: 116 GGATLRALHTPGHSPGSTCFQLEEEGT--VFSGDTLFN 151 >gi|116496226|ref|YP_807960.1| beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|191639751|ref|YP_001988917.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus casei BL23] gi|227532782|ref|ZP_03962831.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301067828|ref|YP_003789851.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei str. Zhang] gi|116106376|gb|ABJ71518.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei ATCC 334] gi|190714053|emb|CAQ68059.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus casei BL23] gi|227189616|gb|EEI69683.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300440235|gb|ADK20001.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei str. Zhang] gi|327383864|gb|AEA55340.1| Metallo-beta-lactamase domain protein [Lactobacillus casei LC2W] gi|327387045|gb|AEA58519.1| Metallo-beta-lactamase domain protein [Lactobacillus casei BD-II] Length = 272 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 18/164 (10%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N + +++D G+S K + + I ++ ++ ++FITH H Sbjct: 21 GNATYIE----TPGHKVLVDAGLSGKKIETL--------MQSIGRDLTDVDSVFITHEHS 68 Query: 79 DHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIE 137 DH + L + VYA+ L + F G + +G +E Sbjct: 69 DHVRGVGVLARRYPKLSVYANAKTFAALP---KSVGKIPEDQLRLFDMGATLTLGDLDVE 125 Query: 138 SVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGDVTD 179 S V+H D + D A D Sbjct: 126 SFGVSHDAAAPQFYQFHHDGKTFTILTDTGYVSDRVAGTIRDAD 169 >gi|327197621|ref|YP_004301312.1| gp36 [Brochothrix phage NF5] gi|296245444|gb|ADH03058.1| gp36 [Brochothrix phage NF5] Length = 236 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 28/163 (17%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMK 63 ++ + G G N L G ++I+CG++F + + Sbjct: 1 MDIQVIATGSDG----NAYLIQDGP----SRLLIECGIAFTQIR-----------KALKY 41 Query: 64 ERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISF 123 + K + I+H H DH L + + ++ +YAS + + Sbjct: 42 DFKGIEGCLISHEHGDHTKGLKKMAAETNIKIYASKGTL--------ERFEFSDSQIVVI 93 Query: 124 QAGDKVDVGAFSIESVRVNHSIPETMALVIRSP-VGNIVHTGD 165 ++ V + + I H E + VI++P ++ D Sbjct: 94 KSKTLVKINKWRILPFETQHDAKEPLGFVIQAPNGERLLFITD 136 >gi|294055984|ref|YP_003549642.1| DNA ligase I, ATP-dependent Dnl1 [Coraliomargarita akajimensis DSM 45221] gi|293615317|gb|ADE55472.1| DNA ligase I, ATP-dependent Dnl1 [Coraliomargarita akajimensis DSM 45221] Length = 323 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 110/324 (33%), Gaps = 57/324 (17%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 I+HAH DH +P + L+ + + G+ ++ Sbjct: 29 VISHAHGDHVARHESFL--------CTPATLDLIRVR---HGERFAQRGSALPFGEWREL 77 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 + H + M V G++++TGD+KL AI + Sbjct: 78 RTCRMRFWPAGHVLGSAMVEVESDRHGSLLYTGDFKLAQGLAA---------EAIQVPEV 128 Query: 192 LALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS-SVSRIRSIIDIAEQI 250 L+ ++T S + ++ ++ + + G ++ + S+ + + ++ + E I Sbjct: 129 DVLVMETTFGRPNYRFPSVETVRADLLCFCQQSLGAGMIPVLLAYSLGKAQEVLMLLEGI 188 Query: 251 GRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYPREQLIVIATGSQGEPRSALA 310 G +++ +++++ V G+ D L + Q V+ P S L Sbjct: 189 GVPLMVH-RTIEQLNQVYRFHGVDIPDTRPLDFLNM------QGCVVLM-----PPSVLK 236 Query: 311 QLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGH 370 +L R R + + ++ R + + + +S H Sbjct: 237 KLPRENCR-----------------------VAMVSGWGLDDSARYRYKA-DEVIPLSDH 272 Query: 371 PYPNDLKRMYQWIRPQVLVAIHGE 394 L + + ++PQ + +HG Sbjct: 273 ADYPGLIELVKRVKPQKVYTLHGY 296 >gi|255016838|ref|ZP_05288964.1| hypothetical protein LmonF_01406 [Listeria monocytogenes FSL F2-515] Length = 205 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + +++D P D+ ++ + +A+ +TH H D Sbjct: 15 NCYII----YQDNVALIVD-----PGDEASKIEAEIAKLEV------KPVAVLLTHCHYD 59 Query: 80 HYGALHDLWSFLHVPVYASPF 100 H GAL ++ ++PVY SP Sbjct: 60 HIGALEEIRKTYNIPVYVSPL 80 >gi|217960529|ref|YP_002339091.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|229139727|ref|ZP_04268297.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST26] gi|217065973|gb|ACJ80223.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|228643858|gb|EEL00120.1| Metallo-beta-lactamase [Bacillus cereus BDRD-ST26] Length = 285 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 G P S +++ID G+ ++ + AI +TH H DH G + + Sbjct: 45 GHPKSNDFVLIDAGMPKCANE------IISVTETRFGTNSRPKAIILTHGHFDHVGGIIE 98 Query: 87 LWSFLHVPVYASPFAIGLL 105 L + VPVYA I L Sbjct: 99 LIKYWDVPVYAHQMEIPFL 117 >gi|289191998|ref|YP_003457939.1| ribonuclease Z [Methanocaldococcus sp. FS406-22] gi|288938448|gb|ADC69203.1| ribonuclease Z [Methanocaldococcus sp. FS406-22] Length = 320 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 23/140 (16%) Query: 19 MNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHE 78 N G + + DCG + + + F + IFITH H Sbjct: 18 KNRNHIGIAFKFGGEVFLFDCG-----------ENIQRQMLFTEVSPMKINHIFITHLHG 66 Query: 79 DHYGALHDLWSFLHV-------PVYASPFAIGLLEA--KRVYERVSKKIPCISFQAGDKV 129 DH + L + ++ ++E K + I A + + Sbjct: 67 DHILGIPGLLQSMGFFGREKELKIFGPEGTKEVIENSLKLGAHYIEFPIKVYEIYAKEPI 126 Query: 130 DV---GAFSIESVRVNHSIP 146 V + I + H IP Sbjct: 127 TVYNEENYEIIAYPTEHGIP 146 >gi|168023878|ref|XP_001764464.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684328|gb|EDQ70731.1| predicted protein [Physcomitrella patens subsp. patens] Length = 603 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 103/325 (31%), Gaps = 10/325 (3%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGL-LEAKRVYERVSKKIPCISFQAGDKVD 130 F+THAH+DH + + P+Y + L L K I + Sbjct: 26 FLTHAHKDHTVGIDSHGTH---PIYCTSLTEKLVLRRYPTLHPSLFKNLEIGEPKLLAGE 82 Query: 131 VGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK--LDDDAILGDVTDKDSLCAIGN 188 AF++ + NH P + L+ G ++HTGD + ++ L S A+ Sbjct: 83 DQAFTVTAFDANH-CPGAIMLLFEGSFGTLLHTGDCRLTIECLNQLPRQFISGSGRALDC 141 Query: 189 EGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAE 248 + + T M E+ +K+ I++ A+ + + Sbjct: 142 VYLDCTFGNVTMVMPSIEEAIEQ-VKRCIWNHSSEARVYLACDMLGQETLLEAVANSFGQ 200 Query: 249 QIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLF--LSDESFGLYPREQLIVIATGSQGEPR 306 +I L L + VA D + + + LY R + + G + Sbjct: 201 KIFINKDGLSRYLADLEVVASDFLTSDSESTRFEICEGFPKLYKRAMDAIKQAKNDGSAQ 260 Query: 307 SALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVH 366 + S + E D S + ++ V V Sbjct: 261 PLFIRPSAQWYSYEQRLEGDGSGVISGPPSFSRFGGSRRRSVTSSSTQAVRDGYGVWHVC 320 Query: 367 VSGHPYPNDLKRMYQWIRPQVLVAI 391 S H +L+R + + P+ +++ Sbjct: 321 YSMHSSRGELERALKLLNPKEVIST 345 >gi|311705721|gb|ADQ01126.1| artemis [Papio anubis] Length = 687 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 106/341 (31%), Gaps = 45/341 (13%) Query: 69 MAIFITHAHEDHYGAL--HDLWSFLHV--PV--YASPFAIGLLEAKRVYERVSKKIPCIS 122 A F++H H+DH L L L V Y SP LL Y K+I I Sbjct: 27 RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWEKRIISIE 86 Query: 123 FQAGDKVDV--------GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 + ++ + + + H P ++ + + G +++TGD++L + Sbjct: 87 IETPTQISLVDEASGEKEEIVVTLLPAGH-CPGSVMFLFQGNNGTVLYTGDFRLAQGEV- 144 Query: 175 GDVTDKDSLCAIGNEG----ILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLV 230 + + + G I ++ D+T I + + + I++ + + Sbjct: 145 ------ARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE--ECLSGILELVRSWITR 196 Query: 231 TTFSSSVSRIRSIIDIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESFGLYP 290 + + ++ G + + S + V V V + + Sbjct: 197 SPYH------VVWLNCKAAYGYEYLFTNLSEELGVQV--HVNKLDMFRNMPDILHHLTTD 248 Query: 291 REQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLV 350 R I + E ++L G ++ I S G ++ Sbjct: 249 RNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVI---- 304 Query: 351 EQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVAI 391 V ++ S H +++K ++ P Sbjct: 305 -----VRTGESSYRACFSFHSSYSEIKDFLSYVCPMNAYPN 340 >gi|229010489|ref|ZP_04167691.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] gi|228750687|gb|EEM00511.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] Length = 242 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 19 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 66 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E I++ + + V Sbjct: 67 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHEPHTKGIAYNQEETLQV 120 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D D I Sbjct: 121 GPFSISFLKTVHPVT-CFAMRITAGDDAVVYSADSSYIPDFIPF 163 >gi|237838189|ref|XP_002368392.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49] gi|211966056|gb|EEB01252.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49] gi|221484335|gb|EEE22631.1| SNM1 protein, putative [Toxoplasma gondii GT1] gi|221505686|gb|EEE31331.1| SNM1 protein, putative [Toxoplasma gondii VEG] Length = 404 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 95/347 (27%), Gaps = 69/347 (19%) Query: 72 FITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 F++H H DHY L WS VY S L+ K + ++ Sbjct: 39 FLSHFHADHYSGLSSSWSR--GVVYCSVLTARLIITFLR----VNKALVRGLDLDTEYEI 92 Query: 132 GAFSIESVRVNHSIPETMAL-VIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEG 190 + + NH P + +HTGD++ D + A+ N Sbjct: 93 ADARVTLLDANH-CPGAVMFLCKTKGGKTYLHTGDFRYDRHMVDHP--------ALANCH 143 Query: 191 ILALMCDSTNAMREGTCISEKGIKKNIYDIMK------NAKGCVLVTTFSSSVSRIRSII 244 I + D+T E + + ++ + G VL S ++ + + + Sbjct: 144 IDTVFLDTTYGRPEYEFEPQVDTIQRAVNVAEEVCKESKQPGRVLFLVGSYTIGKEKIAL 203 Query: 245 DIAEQIGRKIVLLGSSLKRVVSVAIDVGIIKKDQLFLSDESF--GLYPREQLIVIATGSQ 302 ++E G + G +R + + + ++ L + + P + + TG Sbjct: 204 ALSETFGWTVFASGK--RRRILDCLQLEQLRDGGLGDDPATCCIHIVPMNTIAFLPTGWS 261 Query: 303 GEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAIGHIKNRLVEQGVRVIAEDAE 362 E S G Sbjct: 262 FTS------KWNKEH--------------SSMSSGC---------------------ITV 280 Query: 363 CPVHVSGHPYPNDLKRMYQWIRPQVLVAIHGEPLHLVAHKELALQEG 409 + S H +LK +RP ++ + L Sbjct: 281 HLLEYSEHSSYTELKEFVNHLRPNQVIP--TVYSNQKDFCRLLRDMQ 325 >gi|229154762|ref|ZP_04282877.1| Beta-lactamase domain protein [Bacillus cereus ATCC 4342] gi|228628710|gb|EEK85422.1| Beta-lactamase domain protein [Bacillus cereus ATCC 4342] Length = 244 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLIVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E+ I++ + + + Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ESGFNSLTHEPHTKGIAYNPEETLQI 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGSDIVVYSADSSYIPEFIPF 165 >gi|70605970|ref|YP_254840.1| hypothetical protein Saci_0123 [Sulfolobus acidocaldarius DSM 639] gi|68566618|gb|AAY79547.1| conserved protein [Sulfolobus acidocaldarius DSM 639] Length = 198 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 19/147 (12%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 Y I+ID G P + L ++ NL AI TH H DH + Sbjct: 16 SYLVIEEDDSILIDVG-GDPSEIL----------EYVRTNNINLKAILATHGHFDHVIGV 64 Query: 85 HDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHS 144 + VP Y + E Y+ +++I ++ G ++ + Sbjct: 65 PLIQRHFKVPFYMNRKD----EIILRYDSRTREINVDGDLKEGVINFGKILVKVIETPGH 120 Query: 145 IPETMALVIRSPVGNIVHTGDWKLDDD 171 +++ +I + TGD +++ Sbjct: 121 TLGSVSFMIEDN----LFTGDTLFNEN 143 >gi|58336430|ref|YP_193015.1| hypothetical protein LBA0082 [Lactobacillus acidophilus NCFM] gi|58253747|gb|AAV41984.1| hypothetical protein LBA0082 [Lactobacillus acidophilus NCFM] Length = 265 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 26/170 (15%) Query: 4 EELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLP----GVDLVFPDIT 59 ++ L G G N +L G + I++D G+S K G+D+ Sbjct: 1 MKISVLASGSTG----NTSLIMTG----QHKILMDAGLSGKKTKQLLDEVGIDI------ 46 Query: 60 FIMKERKNLMAIFITHAHEDHYGALHDLWSFL-HVPVYASPFAIGLLEAKRVYERVSKKI 118 + F++H H DH G L L + +A+ L ++ + Sbjct: 47 ------NEIDMAFLSHDHTDHSGGLGVLMRRYPKIDAFANSGTWQYLLDTHKIGKLPAE- 99 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKL 168 + G G + + +H E V S D Sbjct: 100 QMNVIEPGQTKTFGDLDVTAFATSHDAAEPQYYVFTSGGKRAAFLTDTGY 149 >gi|258543469|ref|YP_003188902.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256634547|dbj|BAI00523.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256637605|dbj|BAI03574.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-03] gi|256640657|dbj|BAI06619.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-07] gi|256643714|dbj|BAI09669.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-22] gi|256646769|dbj|BAI12717.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-26] gi|256649822|dbj|BAI15763.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-32] gi|256652810|dbj|BAI18744.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655866|dbj|BAI21793.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-12] Length = 223 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 16/87 (18%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + +L +P+ + N ++ + +RK +++D G D VD++ F+ Sbjct: 7 DMQLRIVPVTPFRQ---NCSVLWH--EKTRKAVIVDAG----GD----VDVLL---DFLK 50 Query: 63 KERKNLMAIFITHAHEDHYGALHDLWS 89 K + AI +TH H DH G + L Sbjct: 51 KNILEVEAILLTHGHLDHAGGVAALCR 77 >gi|145590913|ref|YP_001152915.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282681|gb|ABP50263.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 206 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 61/189 (32%), Gaps = 34/189 (17%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 M E +V PL N L G + ++ID P D+ Sbjct: 1 MNVERIVVGPL------ATNAYLACSG----DECVVID-----PGDEA----------AA 35 Query: 61 IMKE--RKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKI 118 I+K RK L+AI TH H DH GA+ +L P YA P + + Sbjct: 36 ILKRLGRKGLVAIIATHLHFDHVGAVLELAEATGAPFYAHPADWAIYKE-LNEVAEEWGF 94 Query: 119 PCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGD--WKLDDDAILGD 176 + + ++ + P + I +V TGD + + Sbjct: 95 SVPEIPPPKNPGLRVWELDVLHTPGHTPGS----ISLVGDGVVFTGDTLFHMSVGRTDLP 150 Query: 177 VTDKDSLCA 185 D D+L Sbjct: 151 GGDWDALVE 159 >gi|52142415|ref|YP_084414.1| metal-dependent hydrolase [Bacillus cereus E33L] gi|51975884|gb|AAU17434.1| metal-dependent hydrolase [Bacillus cereus E33L] Length = 285 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 G P S +++ID G+ ++ + AI +TH H DH G + + Sbjct: 45 GHPKSNDFVLIDAGMPKCANE------IISVTETRFGTNSRPKAIILTHGHFDHVGGIIE 98 Query: 87 LWSFLHVPVYASPFAIGLL 105 L + VPVYA I L Sbjct: 99 LIKYWDVPVYAHQMEIPFL 117 >gi|291483203|dbj|BAI84278.1| hypothetical protein BSNT_01279 [Bacillus subtilis subsp. natto BEST195] Length = 264 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 18/30 (60%) Query: 67 NLMAIFITHAHEDHYGALHDLWSFLHVPVY 96 L AI +TH H DH GA+ ++ VPVY Sbjct: 72 QLKAIILTHGHFDHIGAIEEILEHWDVPVY 101 >gi|149239765|ref|XP_001525758.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL YB-4239] gi|146449881|gb|EDK44137.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL YB-4239] Length = 645 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 14/166 (8%) Query: 47 DLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVP-VYASPFAIGLL 105 ++PGV ++ K F+TH+HEDH L L + VY S ++ Sbjct: 13 EIPGV--------YVDKFNSRGKLFFLTHSHEDH---LQGLLNQSFCKRVYCSKLTRDII 61 Query: 106 EAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV-NHSIPETMALVIRSPVGNIVHTG 164 + Y+ K + F ++ AF++ + + P + + + + TG Sbjct: 62 KLDPKYKNKVKYLVAKEFNNPFQLSTNAFTVTVTMIETYHCPGSAMFLFETGNSACLVTG 121 Query: 165 DWKLDDDAILGDVTDKDSLCAI-GNEGILALMCDSTNAMREGTCIS 209 D + ++ V ++ I G + + + D+T A R IS Sbjct: 122 DIRAEEWWTSSLVKNRYLFPYIKGFKSLDTIYLDTTFAYRGEPYIS 167 >gi|145592084|ref|YP_001154086.1| putative mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM 13514] gi|145283852|gb|ABP51434.1| putative mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM 13514] Length = 327 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 59/191 (30%), Gaps = 22/191 (11%) Query: 58 ITFIMKERKNLMAIF----ITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYER 113 + F++ + + ITH H DH P A+ + + Sbjct: 29 VRFVVDPAGPIKGLVDFVLITHGHSDHVS-----LHAYRYPAVATKETFAAMAVR----Y 79 Query: 114 VSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAI 173 I GD +++ I + H I ++ ++ ++ TGD+ + Sbjct: 80 GRPHPRRIVVSPGDVLELNEVQIAAFDAGH-ILGSVMYLVEVEGLQVLFTGDFNTSGSIL 138 Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTF 233 TD A E L+ ++T + I + + ++ V Sbjct: 139 ----TD----GAEPVERPDVLVMEATYGDPAYVFPNRAEIYDRLIEAVEKYASDGGVAIS 190 Query: 234 SSSVSRIRSII 244 + + + + + Sbjct: 191 AYPLGKAQEVA 201 >gi|322379329|ref|ZP_08053705.1| metallo-beta-lactamase [Helicobacter suis HS1] gi|322380704|ref|ZP_08054843.1| metallo-beta-lactamase [Helicobacter suis HS5] gi|321146872|gb|EFX41633.1| metallo-beta-lactamase [Helicobacter suis HS5] gi|321148242|gb|EFX42766.1| metallo-beta-lactamase [Helicobacter suis HS1] Length = 219 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 34/176 (19%) Query: 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHED 79 N + ++ID G+ ++++++ KN +AI ITH H D Sbjct: 27 NCYILRLEQGD----LIIDPGLG--------------ATSWVLEKSKNPLAILITHGHYD 68 Query: 80 HYG---ALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSK----KIPCISFQAGDK-VDV 131 H AL W + P+YA I +L + ++ I I ++ Sbjct: 69 HIWDAHALKKAWPSM--PLYAPQADIFMLTSDCFNLGLTPCKEEDIIGIECAKSSYSFEI 126 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDD--AILGDVTDKDSLCA 185 I P + + +GD+ +D + A Sbjct: 127 ATIPITYWHFPGHTPGCCMIEVGGA----FFSGDFIFYRSIGRYDFPFSDPKEMRA 178 >gi|294673534|ref|YP_003574150.1| metallo-beta-lactamase family protein [Prevotella ruminicola 23] gi|294473510|gb|ADE82899.1| metallo-beta-lactamase family protein [Prevotella ruminicola 23] Length = 270 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 37/100 (37%) Query: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGD 127 + I ITH H DH ++ L ++PVYA+ ++ + + G+ Sbjct: 50 VKRILITHDHADHIKSVGALSHDCNLPVYATHKVHQGIDQNYCVTKKVSQDHKHELVIGE 109 Query: 128 KVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWK 167 +V +G F + V H E + + V D Sbjct: 110 QVQLGDFKVRPFAVPHDASENVGYELEVEGIVFVVLTDVG 149 >gi|288556243|ref|YP_003428178.1| metallo-beta-lactamase family protein [Bacillus pseudofirmus OF4] gi|288547403|gb|ADC51286.1| metallo-beta-lactamase family protein [Bacillus pseudofirmus OF4] Length = 287 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Query: 22 ALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHY 81 L G P +++++D G+ P + + AI +TH H DH Sbjct: 40 NLVFIGHPDENEFVLVDAGM--PNSAH----AIIKACERVYGSGCRPKAILLTHGHFDHV 93 Query: 82 GALHDLWSFLHVPVYASPF 100 G++ +L V VYA Sbjct: 94 GSIIELLQHWDVSVYAHAL 112 >gi|229101790|ref|ZP_04232505.1| Beta-lactamase domain protein [Bacillus cereus Rock3-28] gi|228681583|gb|EEL35745.1| Beta-lactamase domain protein [Bacillus cereus Rock3-28] Length = 244 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY +++DCG + P ++ A+ ++H H DH + Sbjct: 21 GYLFEHDGFRLLVDCGSGVLAQLQ---KYITP---------SHIDAVVLSHYHHDHVADI 68 Query: 85 HDL-------------WSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDV 131 L L P+Y F E + I++ + + V Sbjct: 69 GVLQYARLITSATKGQLPEL--PIYGHTFD----ENGFHSLTHAPHTKGIAYNPEETLQV 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILG 175 G FSI ++ H + A+ I + +V++ D + I Sbjct: 123 GPFSISFLKTVHPVT-CFAMRITAGSNAVVYSADSSYIPEFIPF 165 >gi|157376097|ref|YP_001474697.1| beta-lactamase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318471|gb|ABV37569.1| beta-lactamase domain protein [Shewanella sediminis HAW-EB3] Length = 526 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 25/113 (22%) Query: 3 NEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIM 62 + + + G V + + SS ++IDCG+ F + G Sbjct: 4 KQAVEIIHHGAVNGVTGSCHQLVINEKSS---LLIDCGL-FQGAETAG-----------S 48 Query: 63 KERKNLM---------AIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL 105 + L A+ +TH H DH G + L + P++A+ LL Sbjct: 49 SNAEQLKIAFDIGSITALLVTHCHIDHVGRIPYLLAAGFDQPIFATTATAALL 101 >gi|170730491|ref|YP_001775924.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa M12] gi|226724038|sp|B0U365|GLO2_XYLFM RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|167965284|gb|ACA12294.1| Hydroxyacylglutathione hydrolase [Xylella fastidiosa M12] Length = 258 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 31/136 (22%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 + I++D G + P + + P AI +TH H DH G + +L Sbjct: 21 DGRAIIVDPGQALPILEAHS-KGLIP------------TAILLTHHHADHIGGVPELLER 67 Query: 91 LHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 PVYA Y R+ GD +++ + + P Sbjct: 68 WPTLPVYAPHDT----RIALNYHRIG---------EGDSLNILGLRFQVIHT----PGHT 110 Query: 150 ALVIRSPVGNIVHTGD 165 + +++ GD Sbjct: 111 HSHLTFIGNDLLFCGD 126 >gi|330980289|gb|EGH78424.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 427 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 63/209 (30%), Gaps = 37/209 (17%) Query: 68 LMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLL------EAKRVYERVSKKIPC 120 + A+ I+H H DH G + +L + P+ S + LL K + ++ Sbjct: 6 IRALLISHVHNDHVGRIPELLASGYKGPILCSEPSAHLLPLVMEDLLKIEFAHDPGQVAR 65 Query: 121 ISFQAGDKVDVGAFSIES--------------VRVNH-----SIPETMALVIRSPVGNIV 161 ++ F R H I + + +V Sbjct: 66 YLDVINKRIIALPFDDWFSLIDNESVHCRVRLQRAGHILGSAYIECDLQYPAQGRSVRVV 125 Query: 162 HTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK-KNIYDI 220 +GD L E L+ +ST R + + + + I D Sbjct: 126 FSGDLGASHTPFLP--------APKPPERADVLVLESTYGNRVHEDRNIRQLGLERIIDK 177 Query: 221 MKNAKGCVLVTTFSSSVSRIRSIIDIAEQ 249 G VL+ FS + R + ++ E Sbjct: 178 ALEDNGTVLIPAFS--IGRTQELLYELED 204 >gi|15838751|ref|NP_299439.1| hydroxyacylglutathione hydrolase [Xylella fastidiosa 9a5c] gi|81547152|sp|Q9PBI4|GLO2_XYLFA RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|9107297|gb|AAF84959.1|AE004030_5 hydroxyacylglutathione hydrolase [Xylella fastidiosa 9a5c] Length = 258 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 31/136 (22%) Query: 31 SRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSF 90 + I++D G + P + + P AI +TH H DH G + +L Sbjct: 21 DGRAIIVDPGQALPILEAHS-KGLIP------------TAILLTHHHADHIGGVPELLER 67 Query: 91 LHV-PVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETM 149 P+YA Y R+ GD +++ + + P Sbjct: 68 WPTLPIYAPHDT----RIALNYHRIG---------EGDSLNILGLRFQVIHT----PGHT 110 Query: 150 ALVIRSPVGNIVHTGD 165 + +++ GD Sbjct: 111 HSHLTFIGNDLLFCGD 126 >gi|291287356|ref|YP_003504172.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884516|gb|ADD68216.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 205 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 27/200 (13%) Query: 1 MKNEELVFLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITF 60 MK E ++ PL A+ Y K +++D P + + + + Sbjct: 1 MKLESIIVGPL----------AVNCYIISKDGKAVIVD-----PGGNTESI------VKY 39 Query: 61 IMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLL------EAKRVYERV 114 + + + +AI TH H DH G++ L +P L A ++++ Sbjct: 40 LKQGKLTPVAIVNTHGHFDHIGSVSQLKEAYDIPFMLHKDDEFLCSHGAESSAMFGFDKI 99 Query: 115 SKKIPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAIL 174 G ++ +G I + P + L +R + + Sbjct: 100 ENPAITDYLTDGQQLSLGGIEIGVIHTPGHSPGGVCLYVRELKSVMTGDTLFLESVGRSD 159 Query: 175 GDVTDKDSLCAIGNEGILAL 194 + L E + +L Sbjct: 160 FPYASTEQLMHSIREKVFSL 179 >gi|154685478|ref|YP_001420639.1| YhfI [Bacillus amyloliquefaciens FZB42] gi|154351329|gb|ABS73408.1| YhfI [Bacillus amyloliquefaciens FZB42] Length = 244 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 80/225 (35%), Gaps = 45/225 (20%) Query: 25 GYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGAL 84 GY S +++DCG + ++ ++ + L A+ ++H H DH + Sbjct: 21 GYLFQSGGYSLLVDCGSA----------VLSKLFAYVP--AEELDAVILSHYHHDHIADI 68 Query: 85 HDL--WSFLH---------VPVYASPFAIGLLEAKRVYERVSKKIPC--ISFQAGDKVDV 131 L + +P+Y I +ER++ K +++Q + + Sbjct: 69 GPLQFAKQVGSFLGKGTHALPIYGHDADIE------QFERLTYKTHTKGVAYQPDRPLSL 122 Query: 132 GAFSIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGI 191 G F+I ++ H + A+ I ++V+T D D I E Sbjct: 123 GPFTITFLKTVHPVT-CYAMRITDGSASVVYTADSSYQDAFIPF------------AENA 169 Query: 192 LALMCDST-NAMREGTCISEKGIKKNIYDIMKNAKGCVLVTTFSS 235 L+C+ A ++GT + + G +++T Sbjct: 170 DLLICECNFYADQDGTSAGHMNSLEAGRIAKEAGAGELILTHLPH 214 >gi|188992760|ref|YP_001904770.1| ribonuclease Z [Xanthomonas campestris pv. campestris str. B100] gi|167734520|emb|CAP52730.1| ribonuclease Z [Xanthomonas campestris pv. campestris] Length = 250 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 37/193 (19%) Query: 34 WIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLW----- 88 W+ IDCG + L ++ + A+FITH H DH G L L+ Sbjct: 32 WLTIDCG----SEGL---------TSYQAHYAQMPQAVFITHVHLDHVGGLERLFVDSYF 78 Query: 89 --SFLHVPVYASPFAIGLLEAKRVYE-RVSKKIPCISFQAGDKVDVG------AFSIESV 139 +Y + LL+ + V + + A V VG +E Sbjct: 79 SERRGRTRLYVPAPVVPLLQRRLADYPNVLAEGGANFWDAFQLVPVGEAFWHDGVRLEVF 138 Query: 140 RVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDST 199 V H PET G +V TGD + + + D + + Sbjct: 139 PVRHHWPET--AYGLRLQGALVWTGDTRPIPEMLARYADDSELIAHD--------CGVHG 188 Query: 200 NAMREGTCISEKG 212 N G E+ Sbjct: 189 NPSHT