HHsearch alignment for GI: 254780870 and conserved domain: COG0016
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=97.01 E-value=0.0015 Score=41.80 Aligned_cols=138 Identities=14% Similarity=0.200 Sum_probs=78.7
Q ss_pred CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH------HHCCCCHHHHHHHCCHHHCCCCCCEECCC
Q ss_conf 388111043169999999999999998669889735751246898------77197311222210402137862000345
Q gi|254780870|r 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW------VESGRYDSYGKEMLRLADRNDKAMIYGPT 109 (449)
Q Consensus 36 ~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~------~~SGh~d~~~~em~~~~d~~~~~~~LrP~ 109 (449)
T Consensus 100 lp~~-~~~~G~~Hpl~~~~e~i~~iF~~mGF~~~~gp~IE~-d~~NFDaLn~P~dHPARdmqDTFy~~~~~~-~~lLRT- 175 (335)
T COG0016 100 LPGR-RIYPGSLHPLTQTIEEIEDIFLGMGFTEVEGPEIET-DFYNFDALNIPQDHPARDMQDTFYLKDDRE-KLLLRT- 175 (335)
T ss_pred CCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCC-CCCCHHHHCCCCCCCCCCCCCEEEECCCCC-CEEECC-
T ss_conf 8886-677898670899999999999974966645882132-022524324999998412444378768877-300236-
Q ss_pred CCC-CCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 554-3101100001342013402641465334566767543453166874042211886887999999999874111100
Q gi|254780870|r 110 HEE-VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 (449)
Q Consensus 110 ~~e-~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~i~~~l 188 (449)
T Consensus 176 HTs~vq~R~l~~~~~----~P~k~~~~grvyR~D~~DaT---Hs~~FhQiEGlv--vd~~~s---~~~Lkg~L~~f~~~~ 243 (335)
T COG0016 176 HTSPVQARTLAENAK----IPIKIFSPGRVYRNDTVDAT---HSPEFHQIEGLV--VDKNIS---FADLKGTLEEFAKKF 243 (335)
T ss_pred CCCHHHHHHHHHCCC----CCCEEECCCCEECCCCCCCC---CCHHEEEEEEEE--EECCCC---HHHHHHHHHHHHHHH
T ss_conf 682765999984799----99158456634117887764---261013367899--958956---999999999999996
Q ss_pred C
Q ss_conf 6
Q gi|254780870|r 189 G 189 (449)
Q Consensus 189 g 189 (449)
T Consensus 244 f 244 (335)
T COG0016 244 F 244 (335)
T ss_pred C
T ss_conf 3