HHsearch alignment for GI: 254780870 and conserved domain: COG0017

Probab=98.14  E-value=6.3e-06  Score=56.87  Aligned_cols=102  Identities=23%  Similarity=0.269  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCHHHCCCCCCEE--CCCCCCCCCCCHHHCCC
Q ss_conf             6999999999999999866988973575124689877197311222210402137862000--34555431011000013
Q gi|254780870|r   46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIK  123 (449)
Q Consensus        46 G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~~d~~~~~~~L--rP~~~e~~~~i~~~~~~  123 (449)
T Consensus       133 v~kirs~i~~a~~eff~~~gF~eV~tP~i~~~~~--E-G-----g~elF~v~y-f~~~a~LtqS~---QLyke~~~~al-  199 (435)
T COG0017         133 VFKIRSSILRAIREFFYENGFTEVHTPIITASAT--E-G-----GGELFKVDY-FDKEAYLTQSP---QLYKEALAAAL-  199 (435)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCC--C-C-----CCEEEEEEE-CCCCEEEECCH---HHHHHHHHHHH-
T ss_conf             8949999999999999758958965946853478--9-9-----850577750-68566771478---89999999985-


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCCC-CEEEEEEECCEECCCHHH
Q ss_conf             4201340264146533456676754345-316687404221188688
Q gi|254780870|r  124 SYRNLPFTFYQIQLKFRDELRPRFGVMR-SREFLMKDAYSFDLTPEG  169 (449)
Q Consensus       124 SYr~LPlr~y~ig~~fR~E~rp~~GL~R-~ReF~q~D~~~F~~~~e~  169 (449)
T Consensus       200 ------~rVf~igP~FRAE~s~T~---RHL~EF~~ld~Emaf~~~~d  237 (435)
T COG0017         200 ------ERVFTIGPTFRAEKSNTR---RHLSEFWMLDPEMAFADLND  237 (435)
T ss_pred             ------CCEEEECCCEECCCCCCC---CHHHHHHEECCEECCCCHHH
T ss_conf             ------764895672554778970---03666733021113676888