HHsearch alignment for GI: 254780870 and conserved domain: COG0172

>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.91  E-value=2.9e-24  Score=172.85  Aligned_cols=190  Identities=18%  Similarity=0.287  Sum_probs=162.2

Q ss_pred             CCCCCCCCCHHHHHHHCC---CEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHH
Q ss_conf             711141256122135303---20003881110431699999999999999986698897357512468987719731122
Q gi|254780870|r   14 NPRDAEIASHKLMLRTGM---IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG   90 (449)
Q Consensus        14 ~~~d~~~~~~~ll~~~g~---i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~   90 (449)
T Consensus       139 ~pk~H~~lge~l~~~-Df~~aaKvsGsrf~~~~~~~a~L~rAL~~f~ld~~~~~Gf~e~~~P~lv~~e~m~gtgqlpkf~  217 (429)
T COG0172         139 EPKDHVELGEKLGLL-DFERAAKVSGSRFYFYKGKGARLERALIQFMLDLHTKHGFTEVLPPYLVNLESMFGTGQLPKFE  217 (429)
T ss_pred             CCCHHHHHHHHCCCC-HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHCCCCCCCCC
T ss_conf             853099876542762-4566502078743898077899999999999999987696586576060598862237898880


Q ss_pred             HHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCC----CCCCCCCEEEEEEECCEECCC
Q ss_conf             2210402137862000345554310110000134201340264146533456676----754345316687404221188
Q gi|254780870|r   91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP----RFGVMRSREFLMKDAYSFDLT  166 (449)
Q Consensus        91 ~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp----~~GL~R~ReF~q~D~~~F~~~  166 (449)
T Consensus       218 e~~y~v~~~---~~~LipTaEvpl~~l~~~Eil~~~~LP~k~~~~S~cFR~EAGs~GrdtrGliRvHQF~KVE~v~~-~~  293 (429)
T COG0172         218 EDLYKVEDP---DLYLIPTAEVPLTNLHRDEILDEEDLPIKYTAYSPCFRSEAGSAGKDTRGLIRVHQFDKVELVVI-TK  293 (429)
T ss_pred             CCCEEECCC---CEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEE-EC
T ss_conf             121584589---87997020215678651620152127802678772542145656643553014664355899997-07


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHH
Q ss_conf             688799999999987411110062012233110010131133
Q gi|254780870|r  167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH  208 (449)
Q Consensus       167 ~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~  208 (449)
T Consensus       294 Pe~S~~~~E~m~~~ae~il~~LeLPyRvv~lctGDlgf~a~k  335 (429)
T COG0172         294 PEESEEELEEMLGNAEEVLQELELPYRVVNLCTGDLGFSAAK  335 (429)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf             011699999999999999997089836843256776886467