HHsearch alignment for GI: 254780870 and conserved domain: COG0172
>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.91 E-value=2.9e-24 Score=172.85 Aligned_cols=190 Identities=18% Similarity=0.287 Sum_probs=162.2
Q ss_pred CCCCCCCCCHHHHHHHCC---CEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHH
Q ss_conf 711141256122135303---20003881110431699999999999999986698897357512468987719731122
Q gi|254780870|r 14 NPRDAEIASHKLMLRTGM---IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 (449)
Q Consensus 14 ~~~d~~~~~~~ll~~~g~---i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~ 90 (449)
T Consensus 139 ~pk~H~~lge~l~~~-Df~~aaKvsGsrf~~~~~~~a~L~rAL~~f~ld~~~~~Gf~e~~~P~lv~~e~m~gtgqlpkf~ 217 (429)
T COG0172 139 EPKDHVELGEKLGLL-DFERAAKVSGSRFYFYKGKGARLERALIQFMLDLHTKHGFTEVLPPYLVNLESMFGTGQLPKFE 217 (429)
T ss_pred CCCHHHHHHHHCCCC-HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHCCCCCCCCC
T ss_conf 853099876542762-4566502078743898077899999999999999987696586576060598862237898880
Q ss_pred HHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCC----CCCCCCCEEEEEEECCEECCC
Q ss_conf 2210402137862000345554310110000134201340264146533456676----754345316687404221188
Q gi|254780870|r 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP----RFGVMRSREFLMKDAYSFDLT 166 (449)
Q Consensus 91 ~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp----~~GL~R~ReF~q~D~~~F~~~ 166 (449)
T Consensus 218 e~~y~v~~~---~~~LipTaEvpl~~l~~~Eil~~~~LP~k~~~~S~cFR~EAGs~GrdtrGliRvHQF~KVE~v~~-~~ 293 (429)
T COG0172 218 EDLYKVEDP---DLYLIPTAEVPLTNLHRDEILDEEDLPIKYTAYSPCFRSEAGSAGKDTRGLIRVHQFDKVELVVI-TK 293 (429)
T ss_pred CCCEEECCC---CEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEE-EC
T ss_conf 121584589---87997020215678651620152127802678772542145656643553014664355899997-07
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHH
Q ss_conf 688799999999987411110062012233110010131133
Q gi|254780870|r 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 (449)
Q Consensus 167 ~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~ 208 (449)
T Consensus 294 Pe~S~~~~E~m~~~ae~il~~LeLPyRvv~lctGDlgf~a~k 335 (429)
T COG0172 294 PEESEEELEEMLGNAEEVLQELELPYRVVNLCTGDLGFSAAK 335 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf 011699999999999999997089836843256776886467