HHsearch alignment for GI: 254780870 and conserved domain: COG0173
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.79 E-value=3.9e-08 Score=70.87 Aligned_cols=114 Identities=24% Similarity=0.319 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCHHHCCCCCCEECCC-CCCCCCCCHHHCCCC
Q ss_conf 6999999999999999866988973575124689877197311222210402137862000345-554310110000134
Q gi|254780870|r 46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT-HEEVMTDIFRSHIKS 124 (449)
Q Consensus 46 G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~~d~~~~~~~LrP~-~~e~~~~i~~~~~~S 124 (449)
T Consensus 140 ~l~lR~kv~~~iR~~ld~~gF~EiETPiLtkST-------------------PEGARDfLV-PSRv~~G~FYALPQSPQl 199 (585)
T COG0173 140 NLKLRSKVTKAIRNFLDDQGFLEIETPILTKST-------------------PEGARDFLV-PSRVHPGKFYALPQSPQL 199 (585)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC-------------------CCCCCCCCC-CCCCCCCCEEECCCCHHH
T ss_conf 999999999999997765498573467414679-------------------865544301-345589965306888799
Q ss_pred CCCC----C-EEEEECCCCCCCCCCCCCCCCCCEEEEEEECC-EECCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2013----4-02641465334566767543453166874042-2118868879999999998741111
Q gi|254780870|r 125 YRNL----P-FTFYQIQLKFRDELRPRFGVMRSREFLMKDAY-SFDLTPEGSKHSYNKMFVSYLRIFH 186 (449)
Q Consensus 125 Yr~L----P-lr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~-~F~~~~e~~~~e~~~~~~~~~~i~~ 186 (449)
T Consensus 200 fKQLLMvsGfdRYyQIarCFRDE-DlRaD--RQPEFTQiD~EmSF-~~~edv~~~~E~l---~~~vf~ 260 (585)
T COG0173 200 FKQLLMVAGFDRYYQIARCFRDE-DLRAD--RQPEFTQIDLEMSF-VDEEDVMELIEKL---LRYVFK 260 (585)
T ss_pred HHHHHHHHCCCCEEEEEEEECCC-CCCCC--CCCCCEEEEEEEEC-CCHHHHHHHHHHH---HHHHHH
T ss_conf 99999880533002356540466-44444--68753367677643-8899999999999---999999