HHsearch alignment for GI: 254780870 and conserved domain: KOG0556

Probab=96.42  E-value=0.0032  Score=39.78  Aligned_cols=106  Identities=20%  Similarity=0.252  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCHHHC-CCCCCEECCCCCCCCCCCHHHCCCCCC
Q ss_conf             9999999999999986698897357512468987719731122221040213-786200034555431011000013420
Q gi|254780870|r   48 KALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYR  126 (449)
Q Consensus        48 ~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~~d~-~~~~~~LrP~~~e~~~~i~~~~~~SYr  126 (449)
T Consensus       229 riq~gvc~~FRe~L~~kgF~EIhTpKli~as----S---EG-GanvF~v~Yfk~~A~L--------------AQSPQLyK  286 (533)
T KOG0556         229 RIQAGVCFAFREYLRSKGFVEIHTPKLIGAS----S---EG-GANVFRVSYFKQKAYL--------------AQSPQLYK  286 (533)
T ss_pred             EHHHHHHHHHHHHHHHCCCCEECCCCCCCCC----C---CC-CCEEEEEEECCCCCHH--------------HCCHHHHH
T ss_conf             0688899999999975686043263201466----7---77-7226899860675032--------------05858887


Q ss_pred             CC-----CEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             13-----4026414653345667675434531668740422118868879999999998741
Q gi|254780870|r  127 NL-----PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR  183 (449)
Q Consensus       127 ~L-----Plr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~  183 (449)
T Consensus       287 QMaI~gdf~rVyeIGpVfRAEdSnthR--hltEFvGLD~EM------af~~hYhEVm~~i~~  340 (533)
T KOG0556         287 QMAICGDFERVYEIGPVFRAEDSNTHR--HLTEFVGLDLEM------AFNEHYHEVMDTIGE  340 (533)
T ss_pred             HHHHHCCHHHEEEECCEEECCCCCHHH--HHHHHHCCCHHH------HHHHHHHHHHHHHHH
T ss_conf             788760611046523556604464166--667761742254------777779999999999