HHsearch alignment for GI: 254780870 and conserved domain: PRK00037
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=427.25 Aligned_cols=379 Identities=22% Similarity=0.328 Sum_probs=261.3
Q ss_pred ECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH-CC-CCHHHHHHHCCHHHCCCCCCEECCCCC
Q ss_conf 0038811104316999999999999999866988973575124689877-19-731122221040213786200034555
Q gi|254780870|r 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVE-SG-RYDSYGKEMLRLADRNDKAMIYGPTHE 111 (449)
Q Consensus 34 ~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~-SG-h~d~~~~em~~~~d~~~~~~~LrP~~~ 111 (449)
T Consensus 5 ~~p~G~rD~lP~~~~~~~~i~~~i~~~~~~~Gy~~I~tP~lE~~d~~~~~~g~~~d~~~k~~y~f~D~~g~~l~LRpD~T 84 (417)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKIGESTDIVEKEMYTFQDKGGRSLTLRPEGT 84 (417)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCCHHHHHEEEEECCCCCEEEECCCCC
T ss_conf 89998776798899999999999999999859958577521509886245776322013320567759998898567767
Q ss_pred CCCCCCHHHC-CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4310110000-134201340264146533456676754345316687404221188688799999999987411110062
Q gi|254780870|r 112 EVMTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 (449)
Q Consensus 112 e~~~~i~~~~-~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl 190 (449)
T Consensus 85 ~~iaR~~~~~~~~~~~~~P~r~~y~g~vfR~e-~p~~G--R~REf~Q~g~eiiG~~~~~aDaE---vi~l~~~~l~~lGl 158 (417)
T PRK00037 85 APVVRAVIENKLYNELPKPFKLYYIGPMFRYE-RPQKG--RYRQFHQFGVEVIGSDSPAADAE---VIALAADLLKALGL 158 (417)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCEEECC-CCCCC--CCCCEEECCHHHHCCCCHHHHHH---HHHHHHHHHHHCCC
T ss_conf 29999999721010688765899872466047-89887--63524563527746641788899---99999999998399
Q ss_pred HHHHHHHCCHHCCCCHHHH--------HHHH--CCCCCCEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf 0122331100101311334--------3454--68677014310100347764111220121001122000136321201
Q gi|254780870|r 191 KSIPMRAESGPIGGDLSHE--------FIVL--ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 (449)
Q Consensus 191 ~~~~v~~~~~~ig~~~s~e--------~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (449)
T Consensus 159 ~~~~i~i~~--~g~~~~~~~~r~~L~~~l~~~~~~l~~~~---~~~~~~~~l~~ld~~~~~~~~~~~~a~~l~~~l~~~~ 233 (417)
T PRK00037 159 KGLVLLLNS--LGDFEIRANYRKALVGYLEKHLDELDEDS---KRRLETNPLRILDKKDKEDQEILADAPKLLDYLDEES 233 (417)
T ss_pred CCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHCHHH
T ss_conf 652001056--77688899999999999999764338788---7766542778764238879999973625453327788
Q ss_pred HHCHH---HHHCCCCCCC---EEEEEEEE--CCCEEEC-------------CCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 10002---3303587655---24321111--5814422-------------31122301158964777723233666344
Q gi|254780870|r 261 DVHNE---KLFDSLPENK---RVSARGIE--VGHIFYF-------------GTKYSLPMSATFKGADGKDHYVQMGSYGI 319 (449)
Q Consensus 261 d~~~~---~~~d~l~~~~---~~~~~~ie--~~~~f~l-------------G~~ys~~~~~~~~~~~g~~~~~~~g~~gi 319 (449)
T Consensus 234 ~~~l~~l~~~l~~~~~~~~~Dl~lvRgldYYTG~vFe~~~~~~~~~~si~gGGRYD~L~~-~f---gg~~~P-AvG-fa~ 307 (417)
T PRK00037 234 KAHFEELKELLDALGIPYVIDPRLVRGLDYYTGTVFEFVTDGLGAQGTVCGGGRYDGLVE-QF---GGPPTP-AVG-FAI 307 (417)
T ss_pred HHHHHHHHHHHHHCCCCEEECHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHH-HH---CCCCCC-EEE-EEE
T ss_conf 999999999999759969986245057665343389999378765010425873157899-84---899787-478-986
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCC
Q ss_conf 74300233221023211111363320321102421788799999999999999986987999758979708678787489
Q gi|254780870|r 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 (449)
Q Consensus 320 G~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~g 399 (449)
T Consensus 308 gieRi~~~l~~~-----------~~~~~~v~v~~~~---~~~~~~a~~i~~~Lr~~gi~v~~~~~~~~l~k~~~~A~~~~ 373 (417)
T PRK00037 308 GIERLLLLLEEL-----------GLESVDVYVVVLG---EEAEAAALKLAEKLRAAGIRVELDLGGRKLKKQFKYADKSG 373 (417)
T ss_pred CHHHHHHHHHHC-----------CCCCCCEEEEECC---HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 399999999964-----------8787767999659---89999999999999988996999589989999999999879
Q ss_pred CCEEEEECCCHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHH
Q ss_conf 98899986240235718999989997878619999999999987
Q gi|254780870|r 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 (449)
Q Consensus 400 ip~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~eli~~i~~~l~ 443 (449)
T Consensus 374 ~~~~vivG~~E~~~~~v~vk~l~~g~q~~v~~~~l~~~lk~~l~ 417 (417)
T PRK00037 374 ARFALILGEDELANGTVTLKDLRTGEQETVALDELVEFLKELLG 417 (417)
T ss_pred CCEEEEECCHHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHC
T ss_conf 79999987448867968999899997179659999999999749