HHsearch alignment for GI: 254780870 and conserved domain: PRK00476
>PRK00476 aspS aspartyl-tRNA synthetase; Validated.
Probab=98.52 E-value=3.5e-07 Score=64.84 Aligned_cols=103 Identities=24% Similarity=0.304 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCH--HHCCCCCCEECCCCCCCCCCCHHHCCC
Q ss_conf 699999999999999986698897357512468987719731122221040--213786200034555431011000013
Q gi|254780870|r 46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 (449)
Q Consensus 46 G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~--~d~~~~~~~LrP~~~e~~~~i~~~~~~ 123 (449)
T Consensus 141 ~fr~Rs~i~~~iR~fl~~~gFiEVeTPiL~~s~----~---eG-A~~-F~vpsr~~~~~fyaL~------------qSPQ 199 (587)
T PRK00476 141 NLKLRSKVTSAIRNFLDDNGFLEIETPILTKST----P---EG-ARD-YLVPSRVHPGKFYALP------------QSPQ 199 (587)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC----C---CC-CCC-CCCCCCCCCCCEECCC------------CCHH
T ss_conf 999999999999999997597400475432568----6---66-644-3013105788551356------------7979
Q ss_pred CCCCC----CE-EEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHH
Q ss_conf 42013----40-264146533456676754345316687404221188688799
Q gi|254780870|r 124 SYRNL----PF-TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 (449)
Q Consensus 124 SYr~L----Pl-r~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~ 172 (449)
T Consensus 200 Lykq~L~vgG~erVyeig~~FRnE~~-~t~--r~pEFt~lE~E~af~d~~dvm~ 250 (587)
T PRK00476 200 LFKQLLMVAGFDRYYQIARCFRDEDL-RAD--RQPEFTQIDIEMSFVTQEDVMD 250 (587)
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCC-CCC--CCCHHHEEEHHHHCCCHHHHHH
T ss_conf 99999885175527996431238888-766--6823423111111168999999