HHsearch alignment for GI: 254780870 and conserved domain: PRK00488

>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated.
Probab=96.35  E-value=0.035  Score=33.19  Aligned_cols=104  Identities=10%  Similarity=0.109  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH--H----HCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHH
Q ss_conf             69999999999999998669889735751246898--7----71973112222104021378620003455543101100
Q gi|254780870|r   46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW--V----ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR  119 (449)
Q Consensus        46 G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~--~----~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~  119 (449)
T Consensus       105 ~~HPit~~~~ei~~iF~~~Gf~v~~GpeiE~~-~~NFdaLn~P~~HPAR~~~DTFy~~----~~~lLRTHTS~~qir~m~  179 (338)
T PRK00488        105 GLHPLTRTIERIEDIFVGLGFEVAEGPEIEDD-YYNFEALNIPKDHPARDMQDTFYID----DRLLLRTHTSPVQIRTME  179 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEECCCCEEEH-HHHHHHHCCCCCCCCCCCCCEEEEC----CCCEECCCCCHHHHHHHH
T ss_conf             64769999999999999869769618831004-5468875699788543646628976----871343568788899997


Q ss_pred             HCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCEEEEEEECCEE
Q ss_conf             001342013402641465334566-76754345316687404221
Q gi|254780870|r  120 SHIKSYRNLPFTFYQIQLKFRDEL-RPRFGVMRSREFLMKDAYSF  163 (449)
Q Consensus       120 ~~~~SYr~LPlr~y~ig~~fR~E~-rp~~GL~R~ReF~q~D~~~F  163 (449)
T Consensus       180 ----~-~~pp~~~i~~GrvyR~d~~DatH----~~~FhQ~Egl~v  215 (338)
T PRK00488        180 ----K-QKPPIRIIAPGRVYRNDSDDATH----SPMFHQVEGLVV  215 (338)
T ss_pred             ----H-CCCCEEEEECCCCCCCCCCCCCC----CEEEEEEEEEEE
T ss_conf             ----2-69986999526631589998753----504664005897