HHsearch alignment for GI: 254780870 and conserved domain: PRK03991
>PRK03991 threonyl-tRNA synthetase; Validated.
Probab=100.00 E-value=0 Score=598.80 Aligned_cols=385 Identities=19% Similarity=0.250 Sum_probs=329.3
Q ss_pred CCHH-HHHHHCCCE--ECC-CCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCH
Q ss_conf 5612-213530320--003-881110431699999999999999986698897357512468987719731122221040
Q gi|254780870|r 21 ASHK-LMLRTGMIH--QHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 (449)
Q Consensus 21 ~~~~-ll~~~g~i~--~~~-~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~ 96 (449)
T Consensus 197 pphv~~mr~~~~~dyEp~Sd~G~~rw~PkG~~i~~lle~Yv~~~~~~~G~~eV~TP~m~d~~~~~~sgH~~~f~e~my~~ 276 (613)
T PRK03991 197 PPHVELMRKKELADYEPGSDVGHMRYYPKGRLMKDLLEDYVYNLVKELGAMPVETPNMYDLSHPAIREHADKFGERQYRV 276 (613)
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHCCCCEEE
T ss_conf 83889998717655574787775123554789999999999999986396684576164055402556887611134256
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCC-CCCCCCCCC-CCCCCEEEEEEECCEECCCHHHHHHHH
Q ss_conf 213786200034555431011000013420134026414653-345667675-434531668740422118868879999
Q gi|254780870|r 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK-FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 (449)
Q Consensus 97 ~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~-fR~E~rp~~-GL~R~ReF~q~D~~~F~~~~e~~~~e~ 174 (449)
T Consensus 277 -~~d~~~~~LrpmnCpgh~~i~~~~~~SYRdLPlRl~E~g~~syR~E~SG~L~GL~RVR~FTqdDaHIFC~~~dQi~~E~ 355 (613)
T PRK03991 277 -KSDKKDLMLRFAACFGQFAMLKDMTISYKNLPLKMYELSDYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMDEAMEEF 355 (613)
T ss_pred -ECCCHHHCCCCCCCCCCEEEECCCCCCHHHCCHHHHHHCCCEEECCCCCCEECEEEEECCCCCCCEECCCCHHHHHHHH
T ss_conf -3276332304457863123510244574326467765224202125677444401332356686113168778999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHHHHH--CCCCCCCCC
Q ss_conf 999998741111006201223311001013113343454686770143101003477641112201210--011220001
Q gi|254780870|r 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII--SLNSIVEQW 252 (449)
Q Consensus 175 ~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 252 (449)
T Consensus 356 ~~~~~li~~v~~~fG~~y~~~~--------r~t~e~w~~-----------------ae~~l~~~~~~~g~~~~~e~~~g~ 410 (613)
T PRK03991 356 EKQHKLILETGRDLGRDYEVAF--------RFTEDFYEE-----------------NKDWIVELAKREGKPVLVEILPER 410 (613)
T ss_pred HHHHHHHHHHHHHCCCCEEEEE--------CCCHHHHHH-----------------HHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 9999999999986397637997--------078888889-----------------999999999972997147665876
Q ss_pred CCCCCCCHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCHHHHHHC
Q ss_conf 3632120110002330358765524321111581442231122301158964777723-233666344743002332210
Q gi|254780870|r 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIES 331 (449)
Q Consensus 253 ~~~~~~~~d~~~~~~~d~l~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~-~~~~g~~giG~~R~~~alle~ 331 (449)
T Consensus 411 ~~fyGPKIDf---~v~DalGR~wq~~TiQlD----f~lp~RF----~l~Yv~edg~~~~PvmiHrAi~GS~ERfi~~LiE 479 (613)
T PRK03991 411 KHYWVLKVEF---AIIDSLGRPIENPTVQID----VENAERF----GIKYVDENGKEKYPVILHCSPTGSIERVIYALLE 479 (613)
T ss_pred CCEECCCEEE---EEEECCCCCEEEEEEEEE----CCCHHHC----CCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 3143141689---998468972450158983----2783226----8789989998958858972665639999999999
Q ss_pred CC-----CCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 23-----2111113633203211024217887999999999999999869879997589797086787874899889998
Q gi|254780870|r 332 SH-----DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 (449)
Q Consensus 332 ~~-----d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iii 406 (449)
T Consensus 480 ~~ag~~~~Gk~p~~P~WLaP~Qv~iiPVs~---~~~~ya~~v~~~L~~~giRv~vD~r~e~lgkKIR~A~~~kiPyi~Vv 556 (613)
T PRK03991 480 KAAKEEKEGKVPMLPTWLSPVQVRVIPVSE---EHLDYAEEVADKLEAAGIRVDVDDRDESLGKKIRDAGKEWVPYVVVI 556 (613)
T ss_pred HHCCCCCCCCCCCCCCCCCCCEEEEEEECH---HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 850101247878888787860379997073---68999999999999779889987788856189998754358889999
Q ss_pred CCCHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHC
Q ss_conf 624023571899998999787861999999999998726
Q gi|254780870|r 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 (449)
Q Consensus 407 G~~el~~~~Vtir~r~tg~q~~v~l~eli~~i~~~l~~~ 445 (449)
T Consensus 557 GdkE~e~gtvsVR~R~~~~~~~msleeli~~i~~ev~g~ 595 (613)
T PRK03991 557 GDKEMESGKLTVTVREESEKEEMTLEELIERIKEETKGY 595 (613)
T ss_pred EHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 313542493799987788616122999999999997189