HHsearch alignment for GI: 254780870 and conserved domain: PRK05159
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional.
Probab=98.60 E-value=1.1e-07 Score=67.88 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCC-CHHHCCCC
Q ss_conf 69999999999999998669889735751246898771973112222104021378620003455543101-10000134
Q gi|254780870|r 46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD-IFRSHIKS 124 (449)
Q Consensus 46 G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~-i~~~~~~S 124 (449)
T Consensus 136 ~~r~Rs~i~~~iR~fl~~~gF~EVeTP~l~~~~~---eG-----ga~~f~~~-~~~~~~yL~~Sp-qly~q~li~~G~-- 203 (434)
T PRK05159 136 IFKIRSEVLRAFREFLYEEGFTEIFTPKIVATGT---EG-----GTELFPVK-YFEKEAFLAQSP-QLYKQMMMAAGF-- 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC---CC-----CCCCCCEE-ECCCEEEECCCC-HHHHHHHHHCCC--
T ss_conf 9999999999999999877919997874325678---87-----55658613-127533414683-799999876356--
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCC-EEEEEEECCEECCCHHHHHHH
Q ss_conf 2013402641465334566767543453-166874042211886887999
Q gi|254780870|r 125 YRNLPFTFYQIQLKFRDELRPRFGVMRS-REFLMKDAYSFDLTPEGSKHS 173 (449)
Q Consensus 125 Yr~LPlr~y~ig~~fR~E~rp~~GL~R~-ReF~q~D~~~F~~~~e~~~~e 173 (449)
T Consensus 204 -----~rvfeI~~~FR~E~~~-t~--RH~pEFT~lE~e~af~d~~d~m~~ 245 (434)
T PRK05159 204 -----ERVFEIGPAFRAEEHN-TT--RHLNEAISIDVEMGFIDEEDVMDL 245 (434)
T ss_pred -----CCEEEECCCEECCCCC-CC--CCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf -----8559966010236587-54--453567656666310689999999