HHsearch alignment for GI: 254780870 and conserved domain: PRK09194
>PRK09194 prolyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=886.61 Aligned_cols=443 Identities=46% Similarity=0.810 Sum_probs=397.4
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Q ss_conf 96306788873107111412561221353032000388111043169999999999999998669889735751246898
Q gi|254780870|r 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 (449)
Q Consensus 1 m~~s~~~~~~l~~~~~d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~ 80 (449)
T Consensus 1 Mr~S~~~~~Tlre~P~dae~~Sh~Ll~raG~Ir~~~sGiy~~LPlg~rvl~Kie~IIr~em~~iGa~Ev~mp~l~p~elW 80 (570)
T PRK09194 1 MRTSQLFLPTLKETPADAEVISHQLMLRAGYIRKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELW 80 (570)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf 98513304001679743245669999870673414377255424369999999999999998649879853567977898
Q ss_pred HHCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 77197311222210402137862000345554310110000134201340264146533456676754345316687404
Q gi|254780870|r 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 (449)
Q Consensus 81 ~~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~ 160 (449)
T Consensus 81 ~~sgR~~~~g~el~r~kDR~~~~~~L~PThEE~it~lv~~~i~SYkqLP~~lYQIqtKfRDE~RPR~GllR~REF~MKDa 160 (570)
T PRK09194 81 QESGRWEKYGPELLRLKDRHGRDFVLGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDA 160 (570)
T ss_pred HHCCCHHHCCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHCCHHEECCCCEECCCCCCCCCCHHHHHHHHHCC
T ss_conf 76188212361346985278985653787389999999985113764680200132333477887676234565345124
Q ss_pred CEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCH------
Q ss_conf 22118868879999999998741111006201223311001013113343454686770143101003477641------
Q gi|254780870|r 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS------ 234 (449)
Q Consensus 161 ~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~------ 234 (449)
T Consensus 161 YSFd~~~e~l~~tY~~~~~AY~~IF~rlgL~~~~v~ADsG~iGG~~ShEF~~~s~~GED~i~~C~~c~yaaN~E~A~~~~ 240 (570)
T PRK09194 161 YSFHADEESLDETYDAMYQAYSRIFTRLGLDFRAVEADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIEKAEALP 240 (570)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 56669989999999999999999999809862999914667588665237876378971799968976056487751147
Q ss_pred ------------HHCCHHHHHCCCC-------------------------------------------------------
Q ss_conf ------------1122012100112-------------------------------------------------------
Q gi|254780870|r 235 ------------ENTDFDDIISLNS------------------------------------------------------- 247 (449)
Q Consensus 235 ------------~~~~~~~~~~~~~------------------------------------------------------- 247 (449)
T Consensus 241 ~~~~~~~~~~~~e~v~TP~~~TIe~l~~~~~v~~~~~iKtl~~~~~~~~~~~~v~v~irGD~evNe~Kl~~~~~~~~l~~ 320 (570)
T PRK09194 241 PPEPRAAPTEELEKVDTPNAKTIEELAEFLNVPAEKTVKTLLVKADEEGEGELVAVLVRGDHELNEVKLENLLGAAPLEL 320 (570)
T ss_pred CCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCC
T ss_conf 76667543000304259996219999987499988813568998421788735899822652004898874037531224
Q ss_pred -----------CCCCCCCCCC----------------------------------------CCHHHCHHHHHCCCCCCC-
Q ss_conf -----------2000136321----------------------------------------201100023303587655-
Q gi|254780870|r 248 -----------IVEQWTAPYA----------------------------------------ATSDVHNEKLFDSLPENK- 275 (449)
Q Consensus 248 -----------~~~~~~~~~~----------------------------------------~~~d~~~~~~~d~l~~~~- 275 (449)
T Consensus 321 a~~eei~~~~g~~~G~iGPv~~~v~ii~D~~v~~~~n~v~GAN~~d~H~~~vn~~RD~~~~~~~Di~~v~~GD~Cp~c~~ 400 (570)
T PRK09194 321 ATEEEIRKLFGAPPGFLGPVNLPIPIIADRSVADMSNFVVGANEDDKHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGG 400 (570)
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 89999997518987755666788149970345210001003588764540676565678643112555256888988997
Q ss_pred -EEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEEC
Q ss_conf -2432111158144223112230115896477772323366634474300233221023211111363320321102421
Q gi|254780870|r 276 -RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 (449)
Q Consensus 276 -~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~~~~~g~~giG~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi 354 (449)
T Consensus 401 ~L~~~rgIEVGHiF~LGtkYS~~m~a~~~d~~Gk~~p~~MGCYGIGVsRllaAiiEq~~De~Gi~WP~~IAPf~V~Ii~~ 480 (570)
T PRK09194 401 TLKIARGIEVGHIFQLGTKYSEAMNATFLDENGKAQPLTMGCYGIGVSRLVAAAIEQNHDERGIIWPKAIAPFDVHIVPV 480 (570)
T ss_pred EEEEEEEEEEEEEECCCCCCCHHCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 12774036888763123301462098799988989761456200246789999999837777540788868849999967
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEECCCCCEEEEEHHHH
Q ss_conf 78879999999999999998698799975897970867878748998899986240235718999989997878619999
Q gi|254780870|r 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 (449)
Q Consensus 355 ~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~el 434 (449)
T Consensus 481 ~~~~~~~~~~ae~iy~~L~~~GidVllDDR~er~G~Kf~DaDLIGiP~~vvvGkk~l~~g~vEvk~R~~~~~~~v~~~el 560 (570)
T PRK09194 481 NMKDEEVRELAEKLYAELLAAGIDVLLDDRKERPGVKFADAELIGIPHRIVVGKRGLAEGIVEYKNRRTGEKEEVKLDEL 560 (570)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECHHHH
T ss_conf 99988999999999999997899899989998853666751641899799992674015859999906897588619999
Q ss_pred HHHHHHHHH
Q ss_conf 999999987
Q gi|254780870|r 435 INYASHRFS 443 (449)
Q Consensus 435 i~~i~~~l~ 443 (449)
T Consensus 561 ~~~v~~ll~ 569 (570)
T PRK09194 561 VEFLKELLK 569 (570)
T ss_pred HHHHHHHHC
T ss_conf 999999855