HHsearch alignment for GI: 254780870 and conserved domain: PRK09194

>PRK09194 prolyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=886.61  Aligned_cols=443  Identities=46%  Similarity=0.810  Sum_probs=397.4

Q ss_pred             CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Q ss_conf             96306788873107111412561221353032000388111043169999999999999998669889735751246898
Q gi|254780870|r    1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW   80 (449)
Q Consensus         1 m~~s~~~~~~l~~~~~d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~   80 (449)
T Consensus         1 Mr~S~~~~~Tlre~P~dae~~Sh~Ll~raG~Ir~~~sGiy~~LPlg~rvl~Kie~IIr~em~~iGa~Ev~mp~l~p~elW   80 (570)
T PRK09194          1 MRTSQLFLPTLKETPADAEVISHQLMLRAGYIRKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELW   80 (570)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf             98513304001679743245669999870673414377255424369999999999999998649879853567977898


Q ss_pred             HHCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf             77197311222210402137862000345554310110000134201340264146533456676754345316687404
Q gi|254780870|r   81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA  160 (449)
Q Consensus        81 ~~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~  160 (449)
T Consensus        81 ~~sgR~~~~g~el~r~kDR~~~~~~L~PThEE~it~lv~~~i~SYkqLP~~lYQIqtKfRDE~RPR~GllR~REF~MKDa  160 (570)
T PRK09194         81 QESGRWEKYGPELLRLKDRHGRDFVLGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDA  160 (570)
T ss_pred             HHCCCHHHCCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHCCHHEECCCCEECCCCCCCCCCHHHHHHHHHCC
T ss_conf             76188212361346985278985653787389999999985113764680200132333477887676234565345124


Q ss_pred             CEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCH------
Q ss_conf             22118868879999999998741111006201223311001013113343454686770143101003477641------
Q gi|254780870|r  161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS------  234 (449)
Q Consensus       161 ~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~------  234 (449)
T Consensus       161 YSFd~~~e~l~~tY~~~~~AY~~IF~rlgL~~~~v~ADsG~iGG~~ShEF~~~s~~GED~i~~C~~c~yaaN~E~A~~~~  240 (570)
T PRK09194        161 YSFHADEESLDETYDAMYQAYSRIFTRLGLDFRAVEADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIEKAEALP  240 (570)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             56669989999999999999999999809862999914667588665237876378971799968976056487751147


Q ss_pred             ------------HHCCHHHHHCCCC-------------------------------------------------------
Q ss_conf             ------------1122012100112-------------------------------------------------------
Q gi|254780870|r  235 ------------ENTDFDDIISLNS-------------------------------------------------------  247 (449)
Q Consensus       235 ------------~~~~~~~~~~~~~-------------------------------------------------------  247 (449)
T Consensus       241 ~~~~~~~~~~~~e~v~TP~~~TIe~l~~~~~v~~~~~iKtl~~~~~~~~~~~~v~v~irGD~evNe~Kl~~~~~~~~l~~  320 (570)
T PRK09194        241 PPEPRAAPTEELEKVDTPNAKTIEELAEFLNVPAEKTVKTLLVKADEEGEGELVAVLVRGDHELNEVKLENLLGAAPLEL  320 (570)
T ss_pred             CCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCC
T ss_conf             76667543000304259996219999987499988813568998421788735899822652004898874037531224


Q ss_pred             -----------CCCCCCCCCC----------------------------------------CCHHHCHHHHHCCCCCCC-
Q ss_conf             -----------2000136321----------------------------------------201100023303587655-
Q gi|254780870|r  248 -----------IVEQWTAPYA----------------------------------------ATSDVHNEKLFDSLPENK-  275 (449)
Q Consensus       248 -----------~~~~~~~~~~----------------------------------------~~~d~~~~~~~d~l~~~~-  275 (449)
T Consensus       321 a~~eei~~~~g~~~G~iGPv~~~v~ii~D~~v~~~~n~v~GAN~~d~H~~~vn~~RD~~~~~~~Di~~v~~GD~Cp~c~~  400 (570)
T PRK09194        321 ATEEEIRKLFGAPPGFLGPVNLPIPIIADRSVADMSNFVVGANEDDKHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGG  400 (570)
T ss_pred             CCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf             89999997518987755666788149970345210001003588764540676565678643112555256888988997


Q ss_pred             -EEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEEC
Q ss_conf             -2432111158144223112230115896477772323366634474300233221023211111363320321102421
Q gi|254780870|r  276 -RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI  354 (449)
Q Consensus       276 -~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~~~~~g~~giG~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi  354 (449)
T Consensus       401 ~L~~~rgIEVGHiF~LGtkYS~~m~a~~~d~~Gk~~p~~MGCYGIGVsRllaAiiEq~~De~Gi~WP~~IAPf~V~Ii~~  480 (570)
T PRK09194        401 TLKIARGIEVGHIFQLGTKYSEAMNATFLDENGKAQPLTMGCYGIGVSRLVAAAIEQNHDERGIIWPKAIAPFDVHIVPV  480 (570)
T ss_pred             EEEEEEEEEEEEEECCCCCCCHHCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
T ss_conf             12774036888763123301462098799988989761456200246789999999837777540788868849999967


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEECCCCCEEEEEHHHH
Q ss_conf             78879999999999999998698799975897970867878748998899986240235718999989997878619999
Q gi|254780870|r  355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV  434 (449)
Q Consensus       355 ~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~el  434 (449)
T Consensus       481 ~~~~~~~~~~ae~iy~~L~~~GidVllDDR~er~G~Kf~DaDLIGiP~~vvvGkk~l~~g~vEvk~R~~~~~~~v~~~el  560 (570)
T PRK09194        481 NMKDEEVRELAEKLYAELLAAGIDVLLDDRKERPGVKFADAELIGIPHRIVVGKRGLAEGIVEYKNRRTGEKEEVKLDEL  560 (570)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECHHHH
T ss_conf             99988999999999999997899899989998853666751641899799992674015859999906897588619999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999987
Q gi|254780870|r  435 INYASHRFS  443 (449)
Q Consensus       435 i~~i~~~l~  443 (449)
T Consensus       561 ~~~v~~ll~  569 (570)
T PRK09194        561 VEFLKELLK  569 (570)
T ss_pred             HHHHHHHHC
T ss_conf             999999855