HHsearch alignment for GI: 254780870 and conserved domain: PRK12325
>PRK12325 prolyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=876.74 Aligned_cols=437 Identities=63% Similarity=1.127 Sum_probs=405.4
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Q ss_conf 96306788873107111412561221353032000388111043169999999999999998669889735751246898
Q gi|254780870|r 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 (449)
Q Consensus 1 m~~s~~~~~~l~~~~~d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~ 80 (449)
T Consensus 1 mr~s~~~~~t~~~~p~~~~~~s~~ll~~~g~i~~~~~Gl~~wlP~G~~i~~~le~~ir~e~~~~G~~eV~tP~l~~~~Lw 80 (438)
T PRK12325 1 MRLSRYFLPTLKENPKEAEIVSHRLMLRAGMIRQQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLW 80 (438)
T ss_pred CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf 98513323010579854544679999970775634687322160589999999999999999749979987765877899
Q ss_pred HHCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 77197311222210402137862000345554310110000134201340264146533456676754345316687404
Q gi|254780870|r 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 (449)
Q Consensus 81 ~~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~ 160 (449)
T Consensus 81 ~~SGh~~~y~~~mf~~~d~~~~~~~l~Pmnc~~~~~i~~~~~~SYRdLPlrl~q~g~~~R~E~sp~~GLlRvReF~m~Da 160 (438)
T PRK12325 81 RESGRYDAYGKEMLRIKDRHDREMLYGPTNEEMITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDA 160 (438)
T ss_pred HHHCCHHHHHHHHCEEECCCCCEECCCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHEECCCCCCCCCCCEEEEEECCCH
T ss_conf 86287645557421213477774313899849999999740342654257887644401120267644101223330415
Q ss_pred CEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHH
Q ss_conf 22118868879999999998741111006201223311001013113343454686770143101003477641112201
Q gi|254780870|r 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 (449)
Q Consensus 161 ~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 240 (449)
T Consensus 161 h~F~~~~e~~~~~~~~v~~~y~~if~~lgl~~~~v~ad~g~igg~~s~Ef~~~~~~ged~i~~~~~~~~~~~~~~~~~~~ 240 (438)
T PRK12325 161 YSFDLDEEGARKSYNRMFVAYLRTFKRLGLKAIPMRADTGPIGGDLSHEFHILAETGESTVFYDKDFLDLPVPGEDIDYD 240 (438)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHEEECHHHHHCCCCCCCCCHH
T ss_conf 43246889999999999999999999809944899823676677512674766522650246613334225676554623
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 21001122000136321201100023303587655243211115814422311223011589647777232336663447
Q gi|254780870|r 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 (449)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~l~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~~~~~g~~giG 320 (449)
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iEvG~if~lg~~ys~~~~~~~~~~dg~~~~~~m~~~GIg 318 (438)
T PRK12325 241 A--DLQDIVDEWTSLYAATDEMHDEAKFAAVPEERRLSARGIEVGHIFYFGTKYSEPMNAKVQGPDGKEVPVHMGSYGIG 318 (438)
T ss_pred H--HHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHEECCCEEEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 5--66789988876503466434675537667566301133033124304530152206744487777322255413342
Q ss_pred CCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 43002332210232111113633203211024217887999999999999999869879997589797086787874899
Q gi|254780870|r 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 (449)
Q Consensus 321 ~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gi 400 (449)
T Consensus 319 ieR~ia~liE~~~d~~G~~wP~wlAP~QV~Iipi~~~~~~~~~~A~~l~~~L~~~girv~~Ddr~e~lG~Kir~a~l~gi 398 (438)
T PRK12325 319 VSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDAACDAACEKLYAALTAAGVDVLYDDTDERAGAKFATMDLIGL 398 (438)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 87899999998364688546767486579999706997999999999999999789989998999997299999986699
Q ss_pred CEEEEECCCHHHCCEEEEEECCCCCEEEEEHHHHHHHHH
Q ss_conf 889998624023571899998999787861999999999
Q gi|254780870|r 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 (449)
Q Consensus 401 p~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~eli~~i~ 439 (449)
T Consensus 399 Py~ivVG~ke~e~g~V~vR~R~~~~~~~v~ide~i~~lk 437 (438)
T PRK12325 399 PWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLK 437 (438)
T ss_pred CEEEEEECCHHHCCEEEEEECCCCCEEEEEHHHHHHHHC
T ss_conf 989999078054698999998899606764999999860