HHsearch alignment for GI: 254780870 and conserved domain: PRK12325

>PRK12325 prolyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=876.74  Aligned_cols=437  Identities=63%  Similarity=1.127  Sum_probs=405.4

Q ss_pred             CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Q ss_conf             96306788873107111412561221353032000388111043169999999999999998669889735751246898
Q gi|254780870|r    1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW   80 (449)
Q Consensus         1 m~~s~~~~~~l~~~~~d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~   80 (449)
T Consensus         1 mr~s~~~~~t~~~~p~~~~~~s~~ll~~~g~i~~~~~Gl~~wlP~G~~i~~~le~~ir~e~~~~G~~eV~tP~l~~~~Lw   80 (438)
T PRK12325          1 MRLSRYFLPTLKENPKEAEIVSHRLMLRAGMIRQQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLW   80 (438)
T ss_pred             CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf             98513323010579854544679999970775634687322160589999999999999999749979987765877899


Q ss_pred             HHCCCCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf             77197311222210402137862000345554310110000134201340264146533456676754345316687404
Q gi|254780870|r   81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA  160 (449)
Q Consensus        81 ~~SGh~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~  160 (449)
T Consensus        81 ~~SGh~~~y~~~mf~~~d~~~~~~~l~Pmnc~~~~~i~~~~~~SYRdLPlrl~q~g~~~R~E~sp~~GLlRvReF~m~Da  160 (438)
T PRK12325         81 RESGRYDAYGKEMLRIKDRHDREMLYGPTNEEMITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDA  160 (438)
T ss_pred             HHHCCHHHHHHHHCEEECCCCCEECCCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHEECCCCCCCCCCCEEEEEECCCH
T ss_conf             86287645557421213477774313899849999999740342654257887644401120267644101223330415


Q ss_pred             CEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHH
Q ss_conf             22118868879999999998741111006201223311001013113343454686770143101003477641112201
Q gi|254780870|r  161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD  240 (449)
Q Consensus       161 ~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  240 (449)
T Consensus       161 h~F~~~~e~~~~~~~~v~~~y~~if~~lgl~~~~v~ad~g~igg~~s~Ef~~~~~~ged~i~~~~~~~~~~~~~~~~~~~  240 (438)
T PRK12325        161 YSFDLDEEGARKSYNRMFVAYLRTFKRLGLKAIPMRADTGPIGGDLSHEFHILAETGESTVFYDKDFLDLPVPGEDIDYD  240 (438)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHEEECHHHHHCCCCCCCCCHH
T ss_conf             43246889999999999999999999809944899823676677512674766522650246613334225676554623


Q ss_pred             HHHCCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             21001122000136321201100023303587655243211115814422311223011589647777232336663447
Q gi|254780870|r  241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG  320 (449)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~l~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~~~~~g~~giG  320 (449)
T Consensus       241 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iEvG~if~lg~~ys~~~~~~~~~~dg~~~~~~m~~~GIg  318 (438)
T PRK12325        241 A--DLQDIVDEWTSLYAATDEMHDEAKFAAVPEERRLSARGIEVGHIFYFGTKYSEPMNAKVQGPDGKEVPVHMGSYGIG  318 (438)
T ss_pred             H--HHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHEECCCEEEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             5--66789988876503466434675537667566301133033124304530152206744487777322255413342


Q ss_pred             CCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf             43002332210232111113633203211024217887999999999999999869879997589797086787874899
Q gi|254780870|r  321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF  400 (449)
Q Consensus       321 ~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gi  400 (449)
T Consensus       319 ieR~ia~liE~~~d~~G~~wP~wlAP~QV~Iipi~~~~~~~~~~A~~l~~~L~~~girv~~Ddr~e~lG~Kir~a~l~gi  398 (438)
T PRK12325        319 VSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDAACDAACEKLYAALTAAGVDVLYDDTDERAGAKFATMDLIGL  398 (438)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             87899999998364688546767486579999706997999999999999999789989998999997299999986699


Q ss_pred             CEEEEECCCHHHCCEEEEEECCCCCEEEEEHHHHHHHHH
Q ss_conf             889998624023571899998999787861999999999
Q gi|254780870|r  401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS  439 (449)
Q Consensus       401 p~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~eli~~i~  439 (449)
T Consensus       399 Py~ivVG~ke~e~g~V~vR~R~~~~~~~v~ide~i~~lk  437 (438)
T PRK12325        399 PWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLK  437 (438)
T ss_pred             CEEEEEECCHHHCCEEEEEECCCCCEEEEEHHHHHHHHC
T ss_conf             989999078054698999998899606764999999860